BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043608
(579 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
Length = 763
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/618 (61%), Positives = 462/618 (74%), Gaps = 40/618 (6%)
Query: 2 SNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
SN+Y+++LCKQ L+NEA+ A++F Q T + STYA LISACS LRSL+ GRK+HDH+
Sbjct: 30 SNEYITTLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDHM 89
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
L SK PD+ LQNHILNMYGKCGSL+DA+ FD MP+RNVVSWT++IAG SQN Q +A+
Sbjct: 90 LKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNAL 149
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+ Y QMLQSGVMP QFTFGSIIKACS LG + LGRQLHAHV+KSE G+H+IAQNALI+MY
Sbjct: 150 EFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMY 209
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
TK + I+DA +VFS +A +D+ SWGSMIA FS+LGYELEALC+F EMLH G Y PNEFIF
Sbjct: 210 TKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIF 269
Query: 242 GSVFSACSNF----------------------------------------ARILFNEIDS 261
GSVFSACS+ AR++F +I
Sbjct: 270 GSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGR 329
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
PDL +WNA+IAG A +A EA++ FS+MR + L+PD +TV SLLCAC LYQGMQV
Sbjct: 330 PDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQV 389
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H YI KMG D +VPVCN +LTMYAKCS L +A+ F+E+ NAD VSWN+I+ AC+ H+Q
Sbjct: 390 HGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQ 449
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
AEE+F L M SQ +PD+IT +V+GA A+ S+E+ Q+HCY KTGL D+ V NG
Sbjct: 450 AEEVFGLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDISVTNG 509
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+D+Y KCGSL +ARK+F+ + NPDVVSWSSLILGYAQFG G+EALKLF MR L V PN
Sbjct: 510 LIDLYAKCGSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPN 569
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
VT VGVLTACSHVGLVEEG LY ME E+GI+PTREHCSC+VDLLARAGC++EAE FI
Sbjct: 570 HVTFVGVLTACSHVGLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLLARAGCLNEAEAFI 629
Query: 562 NQMACDADIVVWKSLLAS 579
+QMA D DIVVWK+LLA+
Sbjct: 630 HQMAFDPDIVVWKTLLAA 647
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 160/514 (31%), Positives = 251/514 (48%), Gaps = 49/514 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +I ACSSL + LGR++H H+L S+ ++ QN +++MY K + DA F +M
Sbjct: 166 TFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSRM 225
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV-MPGQFTFGSIIKACSGLGSVCLG 155
R+++SW +MIAG SQ E +A+ + +ML GV +P +F FGS+ ACS L G
Sbjct: 226 ATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYG 285
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
RQLH IK G + A +L MY K + AR VF I R D+ +W ++IA F+
Sbjct: 286 RQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYG 345
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFN------------EIDSP- 262
G EA+ F++M H G P+E S+ AC++ + + ++D P
Sbjct: 346 GDAKEAIAFFSQMRHQGLI-PDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPV 404
Query: 263 ----------------------------DLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
DL SWNA++ H A E L M +
Sbjct: 405 CNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCISQ 464
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
PD +T+ ++L A +++ G QVH Y +K G + ++ V N ++ +YAKC L A
Sbjct: 465 HRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDISVTNGLIDLYAKCGSLKTAR 524
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F + N D VSW+S+I Q EE +LF M +KP+H+TF V+ AC+ +
Sbjct: 525 KIFDSV-INPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHV 583
Query: 415 ASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSS 472
+E QL+ + K G+ + ++D+ + G L A + M +PD+V W +
Sbjct: 584 GLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLLARAGCLNEAEAFIHQMAFDPDIVVWKT 643
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
L+ A +AL T ++ ++TLV
Sbjct: 644 LL---AACKSVHQALARRTNLKVWKKQHEVITLV 674
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 151/315 (47%), Gaps = 5/315 (1%)
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS-LLCACIGRLTLYQGMQVHSY 324
S N I + NEA+ F ++ + L+ ++ L+ AC +L G ++H +
Sbjct: 29 SSNEYITTLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDH 88
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
++K ++ + N IL MY KC L +A VF + + + VSW S+IA Q+ Q
Sbjct: 89 MLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPER-NVVSWTSVIAGYSQNGQGGN 147
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
+ +ML S + PD TF ++ AC+ + + + QLH ++ K+ + N L+
Sbjct: 148 ALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALIS 207
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS-PNLV 503
+Y K + A +F+ M D++SW S+I G++Q G EAL F M GV PN
Sbjct: 208 MYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEF 267
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
V +ACS + E G L+ M ++G+ + D+ A+ G + A Q
Sbjct: 268 IFGSVFSACSSLLQPEYGRQLHG-MSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQ 326
Query: 564 MACDADIVVWKSLLA 578
+ D+V W +++A
Sbjct: 327 IG-RPDLVAWNAIIA 340
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/618 (61%), Positives = 460/618 (74%), Gaps = 40/618 (6%)
Query: 2 SNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
SN+Y++SLCKQ L+NEA+ A++F Q T + STYA LISACS LRSL+ G+K+HDH+
Sbjct: 30 SNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHM 89
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
L SK PD+ LQNHILNMYGKC SL+DA+ FD MP+RNVVSWT++IAG SQN Q +A+
Sbjct: 90 LKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNAL 149
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+ Y QMLQSGVMP QFTFGSIIKACS LG + LGRQLHAHV+KSE G+H+IAQNALI+MY
Sbjct: 150 EFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMY 209
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
TK + I+DA +VFS +A +D+ SWGSMIA FS+LGYELEALC+F EMLH G Y PNEFIF
Sbjct: 210 TKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIF 269
Query: 242 GSVFSACSNF----------------------------------------ARILFNEIDS 261
GSVFSACS+ AR++F +I
Sbjct: 270 GSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGR 329
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
PDL +WNA+IAG A +A EA++ FS+MR + L+PD +TV SLLCAC LYQGMQV
Sbjct: 330 PDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQV 389
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H YI KMG D +VPVCN +LTMYAKCS L +A+ F+E+ NAD VSWN+I+ AC++H+Q
Sbjct: 390 HGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQ 449
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
AEE+FRL M SQ +PD+IT +V+GA A+ S+E+ Q+HCY KTGL D V NG
Sbjct: 450 AEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNG 509
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+D+Y KCGSL +A K+F+ M NPDVVSWSSLILGYAQFG G+EALKLF MR L V PN
Sbjct: 510 LIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPN 569
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
VT VGVLTACSHVGLVEEG LY ME E+GI PTREHCSC+VDLLARAGC++EAE FI
Sbjct: 570 HVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFI 629
Query: 562 NQMACDADIVVWKSLLAS 579
+QMA D DIVVWK+LLA+
Sbjct: 630 HQMAFDPDIVVWKTLLAA 647
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 170/388 (43%), Gaps = 43/388 (11%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+ + SACSSL + GR++H + DV + +MY KCG L AR+ F ++
Sbjct: 269 FGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIG 328
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+ ++V+W A+IAG + +AI + QM G++P + T S++ AC+ + G Q
Sbjct: 329 RPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQ 388
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI-ARKDVTSWGSMIAAFSKLG 216
+H ++ K + N L+ MY K + DA F + D+ SW +++ A +
Sbjct: 389 VHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHD 448
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
+ E + +++ ++P+ +V A + I
Sbjct: 449 -QAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVT 507
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+F+ + +PD+ SW++LI G A EA+ LF MR ++
Sbjct: 508 NGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVK 567
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ +T +L AC + +G +++ + K G C+ ++ + A+ L A
Sbjct: 568 PNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEG 627
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAE 383
++ + D V W +++AAC H +
Sbjct: 628 FIHQMAFDPDIVVWKTLLAACKTHGNVD 655
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/617 (56%), Positives = 448/617 (72%), Gaps = 40/617 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
+D + SLCK+NL+ EAL A+D Q ++ ++ TY LI+ACSSLRSL+ GRK+H H+L
Sbjct: 66 DDKIISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHML 125
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
QPD++LQNHIL+MYGKCGSL++AR FD MP +NVVSWT+MI+G S+ +E++AI
Sbjct: 126 TCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAIT 185
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
LY+QML+SG +P FTFGSI+K+CSGL L RQLHAHV+KSE G+ LIAQNALI+MYT
Sbjct: 186 LYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYT 245
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
KF ++ DA NVFS I KD+ SWGSMIA FS+LGYELEALCHF EML YQPNEF+FG
Sbjct: 246 KFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFG 305
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
S FSACS AR +F I+ P
Sbjct: 306 SAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKP 365
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
DL +WNA+IAG AS SNA E+ S FS+MR L+P+ +TV SLLCAC + L G+QVH
Sbjct: 366 DLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVH 425
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
SYI+KMGF+ ++PVCN++L+MY+KCS L +AL VF+++G AD VSWN+++ ACLQ NQA
Sbjct: 426 SYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQA 485
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
E+ RL M AS+IKPDH+T +V+ + ++AS E+ +Q+HC+I K+GL D+ V N L
Sbjct: 486 GEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNAL 545
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+++Y KCGSL ARK+F+ + NPD++SWSSLI+GYAQ GCG EA +LF MR LGV PN
Sbjct: 546 INMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNE 605
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
+T VG+LTACSH+G+VEEGL LYR M+ +Y I PT+EHCSC+VDLLARAGC+ AEDFI
Sbjct: 606 ITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIK 665
Query: 563 QMACDADIVVWKSLLAS 579
QM D+VVWK+LLA+
Sbjct: 666 QMPFVPDVVVWKTLLAA 682
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 175/394 (44%), Gaps = 53/394 (13%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+ SACS L GR++H + D+ + +MY KCG LE AR F +
Sbjct: 303 VFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHI 362
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ ++V+W A+IAG + ++ + QM +G++P T S++ ACS + G
Sbjct: 363 EKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGI 422
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK-DVTSWGSMIAAFSKL 215
Q+H++++K + N+L++MY+K + DA VF I K D+ SW +++ A +
Sbjct: 423 QVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQ 482
Query: 216 GYELEALCHFNEMLHHGAYQPNE------------------------FIFGS-------- 243
E L +++ +P+ FI S
Sbjct: 483 NQAGEVL-RLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISV 541
Query: 244 ------VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+++ C + AR +F+ I +PD+ SW++LI G A EA LF MR +
Sbjct: 542 SNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGV 601
Query: 296 LPDGLTVHSLLCAC--IGR----LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
P+ +T +L AC IG L LY+ MQ Y I + C+ ++ + A+
Sbjct: 602 KPNEITFVGILTACSHIGMVEEGLKLYRTMQ-EDYRISPTKEH----CSCMVDLLARAGC 656
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A K++ D V W +++AAC H E
Sbjct: 657 LDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLE 690
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/617 (56%), Positives = 448/617 (72%), Gaps = 40/617 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
+D + SLCK+NL+ EAL A+D Q ++ ++ TY LI+ACSSLRSL+ GRK+H H+L
Sbjct: 66 DDKIISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHML 125
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
QPD++LQNHIL+MYGKCGSL++AR FD MP +NVVSWT+MI+G S+ +E++AI
Sbjct: 126 TCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAIT 185
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
LY+QML+SG +P FTFGSI+K+CSGL L RQLHAHV+KSE G+ LIAQNALI+MYT
Sbjct: 186 LYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYT 245
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
KF ++ DA NVFS I KD+ SWGSMIA FS+LGYELEALCHF EML YQPNEF+FG
Sbjct: 246 KFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFG 305
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
S FSACS AR +F I+ P
Sbjct: 306 SAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKP 365
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
DL +WNA+IAG AS SNA E+ S FS+MR L+P+ +TV SLLCAC + L G+QVH
Sbjct: 366 DLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVH 425
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
SYI+KMGF+ ++PVCN++L+MY+KCS L +AL VF+++G AD VSWN+++ ACLQ NQA
Sbjct: 426 SYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQA 485
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
E+ RL M AS+IKPDH+T +V+ + ++AS E+ +Q+HC+I K+GL D+ V N L
Sbjct: 486 GEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNAL 545
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+++Y KCGSL ARK+F+ + NPD++SWSSLI+GYAQ GCG EA +LF MR LGV PN
Sbjct: 546 INMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNE 605
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
+T VG+LTACSH+G+VEEGL LYR M+ +Y I PT+EHCSC+VDLLARAGC+ AEDFI
Sbjct: 606 ITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIR 665
Query: 563 QMACDADIVVWKSLLAS 579
QM D+VVWK+LLA+
Sbjct: 666 QMPFVPDVVVWKTLLAA 682
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 175/394 (44%), Gaps = 53/394 (13%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+ SACS L GR++H + D+ + +MY KCG LE AR F +
Sbjct: 303 VFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHI 362
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ ++V+W A+IAG + ++ + QM +G++P T S++ ACS + G
Sbjct: 363 EKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGI 422
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK-DVTSWGSMIAAFSKL 215
Q+H++++K + N+L++MY+K + DA VF I K D+ SW +++ A +
Sbjct: 423 QVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQ 482
Query: 216 GYELEALCHFNEMLHHGAYQPNE------------------------FIFGS-------- 243
E L +++ +P+ FI S
Sbjct: 483 NQAGEVL-RLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISV 541
Query: 244 ------VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+++ C + AR +F+ I +PD+ SW++LI G A EA LF MR +
Sbjct: 542 SNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGV 601
Query: 296 LPDGLTVHSLLCAC--IGR----LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
P+ +T +L AC IG L LY+ MQ Y I + C+ ++ + A+
Sbjct: 602 KPNEITFVGILTACSHIGMVEEGLKLYRTMQ-EDYRISPTKEH----CSCMVDLLARAGC 656
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A +++ D V W +++AAC H E
Sbjct: 657 LDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLE 690
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/618 (56%), Positives = 436/618 (70%), Gaps = 40/618 (6%)
Query: 2 SNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
+N Y++ +CKQ Y EAL ++F N++I++ STY LI AC+S+RSL+ G+K+HDHI
Sbjct: 124 TNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHI 183
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
L S CQPD+VLQNHILNMYGKCGSL+DAR FD M RNVVSWT MI+G SQN QENDAI
Sbjct: 184 LKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAI 243
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+YIQMLQSG P TFGSIIKAC G + LGRQLH HVIKS + HLIAQNALI+MY
Sbjct: 244 IMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMY 303
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
T+F +I+ A +VF+ I+ KD+ SW SMI F++LGYE+EAL F +M G YQPNEFIF
Sbjct: 304 TRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIF 363
Query: 242 GSVFSAC-----SNFARIL-----------------------------------FNEIDS 261
GSVFSAC F R + F +I+S
Sbjct: 364 GSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIES 423
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
PDL SWNA+IA + + NEA+ F +M L+PDG+T SLLCAC +T+ QG Q+
Sbjct: 424 PDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQI 483
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
HSYIIK+G D VCN++LTMY KCS L +A VFK++ +NA+ VSWN+I++ACLQH Q
Sbjct: 484 HSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQ 543
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
A E+FRLF ML S+ KPD+IT ++G CA++ASLE+ Q+HC+ K+GL DV V N
Sbjct: 544 AGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNR 603
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+D+Y KCGSL AR +F +NPD+VSWSSLI+GYAQFG G EAL LF M++LGV PN
Sbjct: 604 LIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPN 663
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
VT +GVL+ACSH+GLVEEG H Y ME E GI PTREH SC+VDLLARAGC++EAE+FI
Sbjct: 664 EVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFI 723
Query: 562 NQMACDADIVVWKSLLAS 579
+M + DI +WK+LLAS
Sbjct: 724 KKMGFNPDITMWKTLLAS 741
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 155/541 (28%), Positives = 246/541 (45%), Gaps = 51/541 (9%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P T+ +I AC + LGR++H H++ S ++ QN +++MY + G + A F
Sbjct: 258 PLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFT 317
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV-MPGQFTFGSIIKACSGLGSVC 153
+ ++++SW +MI G +Q E +A+ L+ M + G P +F FGS+ AC L
Sbjct: 318 MISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPE 377
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
GRQ+H K G ++ A +L MY KF + A F I D+ SW ++IAAFS
Sbjct: 378 FGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFS 437
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------- 254
G EA+ F +M+H G P+ F S+ AC + I
Sbjct: 438 DSGDVNEAIYFFCQMMHTG-LMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEA 496
Query: 255 ---------------------LFNEI-DSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
+F ++ ++ +L SWNA+++ H A E LF M
Sbjct: 497 AVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLF 556
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
E PD +T+ ++L C +L G QVH + +K G +V V N ++ MYAKC L +
Sbjct: 557 SENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKH 616
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A VF +N D VSW+S+I Q E LF M ++P+ +T+ V+ AC+
Sbjct: 617 ARDVFGST-QNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACS 675
Query: 413 KMASLEMVTQLHCYIT---KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVV 468
+ +E H Y T + G+ ++ ++D+ + G L A M NPD+
Sbjct: 676 HIGLVE--EGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDIT 733
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
W +L+ G D A + + L S N LV + + VG +E L +M
Sbjct: 734 MWKTLLASCKTHGNVDIAERAAENILKLDPS-NSAALVLLSNIHASVGNWKEVARLRNLM 792
Query: 529 E 529
+
Sbjct: 793 K 793
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 152/316 (48%), Gaps = 5/316 (1%)
Query: 266 SWNALIAGVASHSNANEAMSLFS-EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
S N+ I + + EA+ F+ ++ + + T +L+ AC +L G ++H +
Sbjct: 123 STNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDH 182
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
I+K ++ + N IL MY KC L +A F + + + VSW +I+ Q+ Q +
Sbjct: 183 ILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTM-QLRNVVSWTIMISGYSQNGQEND 241
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
++ +ML S PD +TF ++ AC +++ QLH ++ K+G + N L+
Sbjct: 242 AIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALIS 301
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV-SPNLV 503
+Y + G + A +F + D++SW+S+I G+ Q G EAL LF M G PN
Sbjct: 302 MYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEF 361
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
V +AC + E G ++ M ++G+ + D+ A+ G + A Q
Sbjct: 362 IFGSVFSACRSLLEPEFGRQIHG-MCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQ 420
Query: 564 MACDADIVVWKSLLAS 579
+ D+V W +++A+
Sbjct: 421 IE-SPDLVSWNAIIAA 435
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 121/231 (52%), Gaps = 6/231 (2%)
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ C + + K+ + + S+ +++ + +A + F + S I+ + T+ +++
Sbjct: 107 IPCQFVCLIKQHSRELSTNSYINLMCKQRHYREALDTFNFHPK--NSSIQLESSTYGNLI 164
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
AC + SL+ ++H +I K+ D+ + N ++++Y KCGSL ARK F+ M+ +VV
Sbjct: 165 LACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVV 224
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RI 527
SW+ +I GY+Q G ++A+ ++ +M G P+ +T ++ AC G ++ G L+ +
Sbjct: 225 SWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHV 284
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+++ Y ++ ++ + R G + A D M D++ W S++
Sbjct: 285 IKSGYDHHLIAQN--ALISMYTRFGQIVHASDVFT-MISTKDLISWASMIT 332
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/618 (55%), Positives = 434/618 (70%), Gaps = 41/618 (6%)
Query: 2 SNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
+N Y++ +CKQ Y EAL ++F N++I++ PSTY LI AC+++RSL+ G+++HDHI
Sbjct: 47 TNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHI 106
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
L S CQPD+VLQNHILNMYGKCGSL+DAR FD M R+VVSWT MI+G SQN QENDAI
Sbjct: 107 LKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAI 166
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+YIQML+SG P Q TFGSIIKAC G + LG QLH HVIKS + HLIAQNALI+MY
Sbjct: 167 IMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMY 226
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
TKF +I A +VF+ I+ KD+ SW SMI F++LGYE+EAL F +M G YQPNEFIF
Sbjct: 227 TKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIF 286
Query: 242 GSVFSACSNF----------------------------------------ARILFNEIDS 261
GSVFSAC + A+ F +I+S
Sbjct: 287 GSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIES 346
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
PDL SWNA+IA +A+ S+ NEA+ F +M L+PD +T +LLCAC +TL QGMQ+
Sbjct: 347 PDLVSWNAIIAALAN-SDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQI 405
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
HSYIIKMG D VCN++LTMY KCS L +A VFK++ +N + VSWN+I++AC QH Q
Sbjct: 406 HSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQ 465
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
E FRLF ML S+ KPD+IT ++G CA++ SLE+ Q+HC+ K+GL DV V N
Sbjct: 466 PGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNR 525
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+D+Y KCG L AR +F+ +NPD+VSWSSLI+GYAQFG G EAL LF MR+LGV PN
Sbjct: 526 LIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPN 585
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
VT +GVL+ACSH+GLVEEG HLY ME E GI PTREH SC+VDLLARAGC++EAE+FI
Sbjct: 586 EVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFI 645
Query: 562 NQMACDADIVVWKSLLAS 579
+ D DI +WK+LLAS
Sbjct: 646 KKTGFDPDITMWKTLLAS 663
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 154/316 (48%), Gaps = 5/316 (1%)
Query: 266 SWNALIAGVASHSNANEAMSLFS-EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
S N+ I + + EA+ F+ +++ + + T +L+ AC +L G ++H +
Sbjct: 46 STNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDH 105
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
I+K ++ + N IL MY KC L +A F + + VSW +I+ Q+ Q +
Sbjct: 106 ILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRS-VVSWTIMISGYSQNGQEND 164
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
++ +ML S PD +TF ++ AC +++ QLH ++ K+G + N L+
Sbjct: 165 AIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALIS 224
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV-SPNLV 503
+Y K G + A +F + D++SW+S+I G+ Q G EAL LF M GV PN
Sbjct: 225 MYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEF 284
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
V +AC + E G + + M ++G+ + D+ A+ G + A+ Q
Sbjct: 285 IFGSVFSACRSLLKPEFGRQI-QGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQ 343
Query: 564 MACDADIVVWKSLLAS 579
+ D+V W +++A+
Sbjct: 344 IE-SPDLVSWNAIIAA 358
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/617 (54%), Positives = 439/617 (71%), Gaps = 40/617 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
ND+++SLCK N Y EAL A+DF+Q N++ +IR TY LI ACSS RSL GRK+HDHIL
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S C+ D +L NHIL+MYGKCGSL DAR FD MP+RN+VS+T++I G SQN Q +AI+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
LY++MLQ ++P QF FGSIIKAC+ V LG+QLHA VIK E SHLIAQNALIAMY
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
+F+++ DA VF GI KD+ SW S+IA FS+LG+E EAL H EML G + PNE+IFG
Sbjct: 215 RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 243 SVFSACS----------------------------------------NFARILFNEIDSP 262
S ACS N AR +F++I+ P
Sbjct: 275 SSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP 334
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D ASWN +IAG+A++ A+EA+S+FS+MR +PD +++ SLLCA + L QGMQ+H
Sbjct: 335 DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIH 394
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
SYIIK GF +++ VCN++LTMY CS L +F++ NADSVSWN+I+ ACLQH Q
Sbjct: 395 SYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQP 454
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
E+ RLF ML S+ +PDHIT +++ C +++SL++ +Q+HCY KTGLA + F+ NGL
Sbjct: 455 VEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGL 514
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y KCGSLG AR++F+ M+N DVVSWS+LI+GYAQ G G+EAL LF M+S G+ PN
Sbjct: 515 IDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNH 574
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
VT VGVLTACSHVGLVEEGL LY M+ E+GI PT+EHCSCVVDLLARAG ++EAE FI+
Sbjct: 575 VTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFID 634
Query: 563 QMACDADIVVWKSLLAS 579
+M + D+VVWK+LL++
Sbjct: 635 EMKLEPDVVVWKTLLSA 651
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 168/381 (44%), Gaps = 43/381 (11%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+ + ACSSL G ++H + S+ + + + +MY +CG L AR FD++
Sbjct: 273 FGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE 332
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+ + SW +IAG + N ++A+ ++ QM SG +P + S++ A + ++ G Q
Sbjct: 333 RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQ 392
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK-DVTSWGSMIAAFSKLG 216
+H+++IK + L N+L+ MYT + N+F D SW +++ A +
Sbjct: 393 IHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHE 452
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+E L F ML +P+ G++ C
Sbjct: 453 QPVEMLRLFKLMLV-SECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIK 511
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR +F+ +D+ D+ SW+ LI G A EA+ LF EM+ +
Sbjct: 512 NGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIE 571
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ +T +L AC + +G+++++ + + G C+ ++ + A+ L A
Sbjct: 572 PNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAER 631
Query: 356 VFKELGKNADSVSWNSIIAAC 376
E+ D V W ++++AC
Sbjct: 632 FIDEMKLEPDVVVWKTLLSAC 652
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/617 (54%), Positives = 440/617 (71%), Gaps = 40/617 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
ND+++SLC+ + Y EAL A+DF+Q N++ +IR TY LI ACSS RSL GRK+HDHIL
Sbjct: 32 NDHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 91
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S C+ D +L NHIL+MYGKCGSL DAR FD MP+RN+VS+T++I G SQN QE +AI
Sbjct: 92 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAIT 151
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
LY++MLQ+ ++P QF FGSIIKAC+ G V LG+QLHA VIK E SHLIAQNALIAMY
Sbjct: 152 LYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYV 211
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
+F+++ DA VF GI KD+ SW S+IA FS+LG+E EAL H EML G + PNE+IFG
Sbjct: 212 RFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 271
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
S ACS+ AR +FN+I+ P
Sbjct: 272 SSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERP 331
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D ASWN +IAG+A++ A+EA+S+FSEMR+ +PD +++ SLLCA + L QGMQ+H
Sbjct: 332 DTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIH 391
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
S+IIK GF +++ VCN++LTMY CS L +F++ ADSVSWN+I+ ACLQH Q
Sbjct: 392 SFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQP 451
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
E+ RLF ML S+ +PDHIT +++ C +++SL++ +Q+HCY KTGL + F+ NGL
Sbjct: 452 VEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGL 511
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y KCGSL AR++F+ M+N DVVSWS+LI+GYAQ G G+EAL LF M+S G+ PN
Sbjct: 512 IDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNH 571
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
VT VGVLTACSHVGLVEEGL LY IM+ E+GI PT+EHCSCVVDLLARAG ++EAE FI+
Sbjct: 572 VTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFID 631
Query: 563 QMACDADIVVWKSLLAS 579
+M + D+VVWK+LL++
Sbjct: 632 EMKLEPDVVVWKTLLSA 648
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 236/494 (47%), Gaps = 44/494 (8%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+ +I AC+ + LG+++H ++ + ++ QN ++ MY + + DA F +P
Sbjct: 168 FGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIP 227
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGR 156
++++SW+++IAG SQ E +A+ +ML GV P ++ FGS +KACS L G
Sbjct: 228 AKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGS 287
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H IK E + IA +L MY + + AR VF+ I R D SW +IA + G
Sbjct: 288 QIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNG 347
Query: 217 YELEALCHFNEMLHHG-----------------------AYQPNEFI----FGSVFSACS 249
Y EA+ F+EM + G Q + FI F + S C+
Sbjct: 348 YADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCN 407
Query: 250 NFARI------------LFNEI-DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+ + LF + + D SWNA++ H E + LF M E
Sbjct: 408 SLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECE 467
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD +T+ +LL C+ +L G QVH Y K G + N ++ MYAKC L A +
Sbjct: 468 PDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRI 527
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + N D VSW+++I Q EE LF M +S I+P+H+TF V+ AC+ +
Sbjct: 528 FDSM-DNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGL 586
Query: 417 LEMVTQLHCYI-TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
+E +L+ + T+ G++ + ++D+ + G L A + + M+ PDVV W +L+
Sbjct: 587 VEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLL 646
Query: 475 LGYAQFGCGDEALK 488
G D A K
Sbjct: 647 SACKTQGNVDLAQK 660
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/618 (53%), Positives = 418/618 (67%), Gaps = 40/618 (6%)
Query: 2 SNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
+N Y+ LCKQ+ Y EAL A+DF N+N PSTY L+ AC++ RSL +K+HDH+
Sbjct: 126 TNSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHV 185
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
L S QP ++LQNH++NMYGKCGS++DAR FD M NVVSWT+MI+G SQN Q NDAI
Sbjct: 186 LKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAI 245
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+YIQM +SG P Q TFGS+IKAC G + LGRQLHAHVIKS G HL +QNALI+MY
Sbjct: 246 IMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMY 305
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
T F +I A NVF+ I KD+ SWG+MI + +LGY +EAL F ++L G YQPNEFIF
Sbjct: 306 TNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIF 365
Query: 242 GSVFSACSNF----------------------------------------ARILFNEIDS 261
GSVFSACS+ A++ F +I +
Sbjct: 366 GSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKN 425
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
PD+ SWNA+IA A + +ANEA+ F +M L PD +T SLLC C + L QG Q+
Sbjct: 426 PDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQI 485
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
HSYI+K+GFD + VCN++LTMY KCS L +AL VF+++ +NA+ VSWN+I++ACLQ Q
Sbjct: 486 HSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQ 545
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
E FRL+ M S KPD IT ++G CA++ SL + Q+HCY K+GL DV V NG
Sbjct: 546 EGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNG 605
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+D+Y KCGSL AR +F+ +N D+VSWSSLI+GYAQ G G EAL LF M +LGV PN
Sbjct: 606 LIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPN 665
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
VT +G L+ACSH+GLVEEG LY+ ME E+GI PTREH SC+VDLLARAGC+HEAE FI
Sbjct: 666 EVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFI 725
Query: 562 NQMACDADIVVWKSLLAS 579
+ DADI WK+LLA+
Sbjct: 726 QKSGLDADITAWKTLLAA 743
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 180/393 (45%), Gaps = 53/393 (13%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+ + SACSSL L+ G++VH + + +V + +MY K G L A+M F ++
Sbjct: 365 FGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIK 424
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
++VSW A+IA + N N+AI + QM+ G+ P T+ S++ C + GRQ
Sbjct: 425 NPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQ 484
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK-DVTSWGSMIAAFSKLG 216
+H++++K + N+L+ MYTK + DA NVF I+R ++ SW ++++A +
Sbjct: 485 IHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKK 544
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
E E + EM H +P+ ++ C+
Sbjct: 545 QEGETFRLYKEM-HFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVC 603
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR +F+ + D+ SW++LI G A +EA++LF M + +
Sbjct: 604 NGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQ 663
Query: 297 PDGLTVHSLLCAC--IGRLT----LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
P+ +T L AC IG + LY+ M+ + G + I+ + A+ L
Sbjct: 664 PNEVTYLGALSACSHIGLVEEGWRLYKSMET-----EHGIPPTREHFSCIVDLLARAGCL 718
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
A ++ G +AD +W +++AAC HN +
Sbjct: 719 HEAETFIQKSGLDADITAWKTLLAACKTHNNVD 751
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 142/313 (45%), Gaps = 49/313 (15%)
Query: 16 NEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQ 73
NEA+ DF + +I + P TY L+ C S L GR++H +I+ ++ +
Sbjct: 445 NEAI---DFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVC 501
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQR-NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
N +L MY KC L DA F + + N+VSW A+++ C Q QE + +LY +M SG
Sbjct: 502 NSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGN 561
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
P T +++ C+ L S+ +G Q+H + IKS + N LI MY K + AR+
Sbjct: 562 KPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARD 621
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA 252
VF D+ SW S+I +++ G EAL F M + G QPNE + SACS+
Sbjct: 622 VFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGV-QPNEVTYLGALSACSHIG 680
Query: 253 RI-----LFNEIDSP-------------------------------------DLASWNAL 270
+ L+ +++ D+ +W L
Sbjct: 681 LVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTL 740
Query: 271 IAGVASHSNANEA 283
+A +H+N + A
Sbjct: 741 LAACKTHNNVDIA 753
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 290/590 (49%), Positives = 379/590 (64%), Gaps = 49/590 (8%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQ-PD------VVLQNHILNMYGKCGSLEDAR 90
YA L+SACS LRSL GR+VH H++ S PD VL NH++ MYG+C + + AR
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+MP RN VSW ++IA QN + DA+ L+ ML+SG QF GS ++AC+ LG
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
V GRQ+HAH +KSE GS LI QNAL+ MY+K + D +F I KD+ SWGS+IA
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------- 249
F++ G+E+EAL F EM+ G++ PNEF FGS F AC
Sbjct: 227 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286
Query: 250 -------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ AR+ F I++PDL SWN+++ + +EA+ LFSEM
Sbjct: 287 RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 346
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
RD L PDG+TV LLCAC+GR LY G +HSY++K+G D +V VCN++L+MYA+CS L
Sbjct: 347 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDL 406
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
+A+ VF E+ K+ D V+WNSI+ AC QHN EE+ +LFS + S+ D I+ N+V+ A
Sbjct: 407 SSAMDVFHEI-KDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSA 465
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM-ENPDVVS 469
A++ EMV Q+H Y K GL D + N L+D Y KCGSL A +LF M N DV S
Sbjct: 466 SAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFS 525
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
WSSLI+GYAQFG EA LF+RMRSLG+ PN VT +GVLTACS VG V EG + Y IME
Sbjct: 526 WSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIME 585
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EYGI+PTREHCSC+VDLLARAG + EA +FI+QM + DI++WK+LLA+
Sbjct: 586 PEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAA 635
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 179/406 (44%), Gaps = 45/406 (11%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+ AC ++ S + G ++H + + D+ + + +MY +C +L+ AR+ F ++
Sbjct: 257 FGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIE 316
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
++VSW +++ S ++A+ L+ +M SG+ P T ++ AC G ++ GR
Sbjct: 317 APDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRL 376
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H++++K + N+L++MY + + A +VF I +DV +W S++ A ++ +
Sbjct: 377 IHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNH 436
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA--------------------RILFN 257
E L F+ +L+ + +V SA + R+L N
Sbjct: 437 PEEVLKLFS-LLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSN 495
Query: 258 EI---------------------DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+ ++ D+ SW++LI G A A EA LFS MR +
Sbjct: 496 TLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIR 555
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ +T +L AC + +G +S + + G C+ I+ + A+ L A
Sbjct: 556 PNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAAN 615
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
++ D + W +++AA HN E R +L I P H
Sbjct: 616 FIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGIL--NIDPSH 659
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 110/215 (51%), Gaps = 6/215 (2%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
C Q+ + E ++ N + + + ++SA + L ++ ++VH + + D
Sbjct: 431 CAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDD 490
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMP-QRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
+L N +++ Y KCGSL+DA F+ M R+V SW+++I G +Q +A L+ +M
Sbjct: 491 RMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMR 550
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ--NALIAMYTKFDR 186
G+ P TF ++ ACS +G V G ++ +++ E+G + + ++ + + +
Sbjct: 551 SLGIRPNHVTFIGVLTACSRVGFVNEGCYYYS-IMEPEYGIVPTREHCSCIVDLLARAGK 609
Query: 187 ILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELE 220
+ +A N + D+ W +++AA SK+ ++E
Sbjct: 610 LTEAANFIDQMPFEPDIIMWKTLLAA-SKMHNDME 643
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 290/590 (49%), Positives = 380/590 (64%), Gaps = 49/590 (8%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQ-PD------VVLQNHILNMYGKCGSLEDAR 90
YA L+SACS LRSL GR+VH H++ S PD VL NH++ MYG+C + + AR
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+MP RN VSW ++IA QN + DA+ L+ ML+SG QF GS ++AC+ LG
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
V GRQ+HAH +KSE GS LI QNAL+ MY+K + D +F I KD+ SWGS+IA
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------- 249
F++ G+E+EAL F +M+ G++ PNEF FGS F AC
Sbjct: 227 GFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286
Query: 250 -------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ AR+ F I++PDL SWN+++ + +EA+ LFSEM
Sbjct: 287 RDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 346
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
RD L PDG+TV LLCAC+GR LY G +HSY++K+G D +V VCN++L+MYA+CS L
Sbjct: 347 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDL 406
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
+A+ VF E+ K+ D V+WNSI+ AC QHN EE+ +LFS + S+ D I+ N+V+ A
Sbjct: 407 SSAMDVFHEI-KDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSA 465
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM-ENPDVVS 469
A++ EMV Q+H Y K GL D + N L+D Y KCGSL A +LF M N DV S
Sbjct: 466 SAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFS 525
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
WSSLI+GYAQFG EAL LF+RMRSLG+ PN VT +GVLTACS VG V EG + Y IME
Sbjct: 526 WSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIME 585
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EYGI+PTREHCSC+VDLLARAG + EA +FI+QM + DI++WK+LLA+
Sbjct: 586 PEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAA 635
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 179/406 (44%), Gaps = 45/406 (11%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+ AC ++ S + G ++H + + D+ + + +MY + +L+ AR+ F ++
Sbjct: 257 FGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIE 316
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
++VSW +++ S ++A+ L+ +M SG+ P T ++ AC G ++ GR
Sbjct: 317 APDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRL 376
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H++++K + N+L++MY + + A +VF I +DV +W S++ A ++ +
Sbjct: 377 IHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNH 436
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA--------------------RILFN 257
E L F+ +L+ + +V SA + R+L N
Sbjct: 437 PEEVLKLFS-LLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSN 495
Query: 258 EI---------------------DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+ ++ D+ SW++LI G A A EA+ LFS MR +
Sbjct: 496 TLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIR 555
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ +T +L AC + +G +S + + G C+ I+ + A+ L A
Sbjct: 556 PNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAAN 615
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
++ D + W +++AA HN E R +L I P H
Sbjct: 616 FIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGIL--NIDPSH 659
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 111/215 (51%), Gaps = 6/215 (2%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
C Q+ + E ++ N + + + ++SA + L ++ ++VH + + D
Sbjct: 431 CAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDD 490
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMP-QRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
+L N +++ Y KCGSL+DA F+ M R+V SW+++I G +Q +A+ L+ +M
Sbjct: 491 RMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMR 550
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ--NALIAMYTKFDR 186
G+ P TF ++ ACS +G V G ++ +++ E+G + + ++ + + +
Sbjct: 551 SLGIRPNHVTFIGVLTACSRVGFVNEGCYYYS-IMEPEYGIVPTREHCSCIVDLLARAGK 609
Query: 187 ILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELE 220
+ +A N + D+ W +++AA SK+ ++E
Sbjct: 610 LTEAANFIDQMPFEPDIIMWKTLLAA-SKMHNDME 643
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 292/595 (49%), Positives = 379/595 (63%), Gaps = 48/595 (8%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQP-----DVVLQNHILNMYGKCGSL 86
R+ P+ YA L++ACS LRSL GR VH H+L S + + +L NH++ MYG+CG+
Sbjct: 39 RLSPAAYAALVAACSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAP 98
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
+ AR+ FD M RN VSW A+IA +QN + DA+ L+ ML+SG MP QF GS I AC
Sbjct: 99 DSARVVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICAC 158
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
S LG + LGRQ+HA IK E GS LI QNAL+ MY+K + D +F I KD+ SWG
Sbjct: 159 SELGDLGLGRQVHAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWG 218
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS----------------- 249
S+IA ++ G E++AL F EM+ G + PNEF FGSVF ACS
Sbjct: 219 SIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSV 278
Query: 250 ------------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
+ AR +F I+SPDL SWN+LI ++ +EAM
Sbjct: 279 KYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMV 338
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
LFSEMRD L PDG+TV +LLCAC+G L+QG +HSY++K+G +V V N++L+MYA
Sbjct: 339 LFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYA 398
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
+C +A+ VF E + D V+WNSI+ AC+QH E++F+LFS + S D I+ N
Sbjct: 399 RCLDFSSAMDVFHET-HDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLN 457
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM-EN 464
+V+ A A++ EMV Q+H Y K GL D + NGL+D Y KCGSL A KLF M
Sbjct: 458 NVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTG 517
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
DV SWSSLI+GYAQFG EAL LF RMR+LGV PN VT VGVLTACS VGLV+EG +
Sbjct: 518 RDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLVDEGCYY 577
Query: 525 YRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
Y IM+ EYGI+PTREHCSCV+DLLARAG + EA F++QM + DI++WK+LLA+
Sbjct: 578 YSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAA 632
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 178/409 (43%), Gaps = 50/409 (12%)
Query: 38 YAGLISACSSL-RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+ + ACS + SL+ G ++H + + + + +MY +C L+ AR F ++
Sbjct: 253 FGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRI 312
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++VSW ++I S ++A+ L+ +M SG+ P T +++ AC G ++ GR
Sbjct: 313 ESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGR 372
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H++++K G +I N+L++MY + A +VF +DV +W S++ A +
Sbjct: 373 SIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQ 432
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+ LE + +LH + +V SA +
Sbjct: 433 H-LEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLS 491
Query: 252 ---------------ARILFNEIDS-PDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A LF + + D+ SW++LI G A A EA+ LF+ MR+ +
Sbjct: 492 NGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGV 551
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV---CNAILTMYAKCSVLCN 352
P+ +T +L AC R+ L + I+K + VP C+ +L + A+ L
Sbjct: 552 KPNHVTFVGVLTAC-SRVGLVDEGCYYYSIMKPEY-GIVPTREHCSCVLDLLARAGRLSE 609
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
A ++ D + W +++AA HN + R +L I P H
Sbjct: 610 AAKFVDQMPFEPDIIMWKTLLAASRTHNDVDMGKRAAEGVL--NIDPSH 656
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 283/590 (47%), Positives = 368/590 (62%), Gaps = 66/590 (11%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQ-PD------VVLQNHILNMYGKCGSLEDAR 90
YA L+SACS LRSL GR+VH H++ S PD VL NH++ MYG
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYG--------- 97
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
RN VSW ++IA QN + DA+ L+ ML+SG QF GS ++AC+ LG
Sbjct: 98 --------RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 149
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
V GRQ+HAH +KSE GS LI QNAL+ MY+K + D +F I KD+ SWGS+IA
Sbjct: 150 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 209
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------- 249
F++ G+E+EAL F EM+ G++ PNEF FGS F AC
Sbjct: 210 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 269
Query: 250 -------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ AR+ F I++PDL SWN+++ + +EA+ LFSEM
Sbjct: 270 RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 329
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
RD L PDG+TV LLCAC+GR LY G +HSY++K+G D +V VCN++L+MYA+CS L
Sbjct: 330 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDL 389
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
+A+ VF E+ K+ D V+WNSI+ AC QHN EE+ +LFS + S+ D I+ N+V+ A
Sbjct: 390 SSAMDVFHEI-KDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSA 448
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM-ENPDVVS 469
A++ EMV Q+H Y K GL D + N L+D Y KCGSL A +LF M N DV S
Sbjct: 449 SAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFS 508
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
WSSLI+GYAQFG EA LF+RMRSLG+ PN VT +GVLTACS VG V EG + Y IME
Sbjct: 509 WSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIME 568
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EYGI+PTREHCSC+VDLLARAG + EA +FI+QM + DI++WK+LLA+
Sbjct: 569 PEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAA 618
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 179/406 (44%), Gaps = 45/406 (11%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+ AC ++ S + G ++H + + D+ + + +MY +C +L+ AR+ F ++
Sbjct: 240 FGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIE 299
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
++VSW +++ S ++A+ L+ +M SG+ P T ++ AC G ++ GR
Sbjct: 300 APDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRL 359
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H++++K + N+L++MY + + A +VF I +DV +W S++ A ++ +
Sbjct: 360 IHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNH 419
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA--------------------RILFN 257
E L F+ +L+ + +V SA + R+L N
Sbjct: 420 PEEVLKLFS-LLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSN 478
Query: 258 EI---------------------DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+ ++ D+ SW++LI G A A EA LFS MR +
Sbjct: 479 TLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIR 538
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ +T +L AC + +G +S + + G C+ I+ + A+ L A
Sbjct: 539 PNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAAN 598
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
++ D + W +++AA HN E R +L I P H
Sbjct: 599 FIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGIL--NIDPSH 642
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 110/215 (51%), Gaps = 6/215 (2%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
C Q+ + E ++ N + + + ++SA + L ++ ++VH + + D
Sbjct: 414 CAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDD 473
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMP-QRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
+L N +++ Y KCGSL+DA F+ M R+V SW+++I G +Q +A L+ +M
Sbjct: 474 RMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMR 533
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ--NALIAMYTKFDR 186
G+ P TF ++ ACS +G V G ++ +++ E+G + + ++ + + +
Sbjct: 534 SLGIRPNHVTFIGVLTACSRVGFVNEGCYYYS-IMEPEYGIVPTREHCSCIVDLLARAGK 592
Query: 187 ILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELE 220
+ +A N + D+ W +++AA SK+ ++E
Sbjct: 593 LTEAANFIDQMPFEPDIIMWKTLLAA-SKMHNDME 626
>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Brachypodium distachyon]
Length = 757
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 277/581 (47%), Positives = 365/581 (62%), Gaps = 51/581 (8%)
Query: 45 CSSLRSLQLGRKVHDHILLSKCQPD------VVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
CS LR+L LG VH H+L S PD VL NH++ MYG+C + E AR+ FD+MP
Sbjct: 48 CSRLRALCLGCLVHRHLLAS---PDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPA 104
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+N VSW ++IA +QN + DA+ L+ ML+SG P QF GS ++AC+ LG + +GRQ+
Sbjct: 105 KNPVSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQV 164
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
HA +KSE+GS LI QNAL+ MY+K + D +F + KD SWGS+IA F++ G E
Sbjct: 165 HAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCE 224
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACS----------------------------- 249
+EAL F EM+ G + PNEF FGSVFSAC
Sbjct: 225 MEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCS 284
Query: 250 -----------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
A+ +F ID+PDL SWN++I + +EAM L SEMR L PD
Sbjct: 285 LSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPD 344
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
G+TV LLCAC+G + G +HSY++K+G D +V VCN++L+MYA+C +A+ VF
Sbjct: 345 GITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFH 404
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
E ++ D V+WNSI+ AC+QH E +F+LF+ + S D I+ N+V+ A A++ E
Sbjct: 405 ET-RDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFE 463
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM-ENPDVVSWSSLILGY 477
MV Q+H K GL D + NGL+D Y KCGSL A KLF M N DV SWSSLI+GY
Sbjct: 464 MVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGY 523
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
AQ G +AL LF RMR+LGV PN VT VGVLTACS VGLV+EG + Y IME E+G++PT
Sbjct: 524 AQSGYPRKALDLFARMRNLGVRPNHVTFVGVLTACSRVGLVDEGCYYYSIMEPEHGVLPT 583
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
REHCSCV+DLLARAG + EA F++QM + DIV+WK+LLA
Sbjct: 584 REHCSCVIDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLA 624
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 232/481 (48%), Gaps = 50/481 (10%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+ AC+ L + +GR+VH + S+ D+++QN ++ MY K G + D + F +M +++
Sbjct: 149 VRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDP 208
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGRQLHA 160
+SW ++IAG +Q E +A++++ +M+ G+ P +F FGS+ AC LGS+ G Q+H+
Sbjct: 209 ISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHS 268
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+K + A +L MY + ++ A+ VF GI D+ SW S+I A S G E
Sbjct: 269 LSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSE 328
Query: 221 ALCHFNEMLHHGAYQPNEFIFG-------------------------------------S 243
A+ +EM G + G S
Sbjct: 329 AMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLS 388
Query: 244 VFSACSNFARIL--FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
+++ C +F+ + F+E D+ +WN+++ H + LF+ ++ D ++
Sbjct: 389 MYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRIS 448
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
++++L A QVH+ K+G ++ + N ++ YAKC L +A+ +F+ +G
Sbjct: 449 LNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMG 508
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
N+D SW+S+I Q + LF+RM ++P+H+TF V+ AC+++ +
Sbjct: 509 TNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVTFVGVLTACSRVG----LV 564
Query: 422 QLHCYI-----TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLIL 475
CY + G+ + ++D+ + G L A K + M PD+V W +L+
Sbjct: 565 DEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLA 624
Query: 476 G 476
G
Sbjct: 625 G 625
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 173/336 (51%), Gaps = 8/336 (2%)
Query: 247 ACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
A AR++F+E+ + + SW ++IA A + + +A+ LFS M PD + S +
Sbjct: 90 AAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTV 149
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
AC + G QVH+ +K S++ V NA++TMY+K ++ + L+F + + D
Sbjct: 150 RACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRM-REKDP 208
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIK-PDHITFNDVMGACAKMASLEMVTQLHC 425
+SW SIIA Q E ++F M+A + P+ F V AC + SLE Q+H
Sbjct: 209 ISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHS 268
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
K L + + L D+Y +C L SA+++F ++ PD+VSW+S+I + G E
Sbjct: 269 LSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSE 328
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSC 543
A+ L + MR G+ P+ +T+ G+L AC ++ G +H Y + + G+ C+
Sbjct: 329 AMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLV---KLGLDGDVSVCNS 385
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++ + AR A D ++ D D+V W S+L +
Sbjct: 386 LLSMYARCMDFSSAMDVFHETR-DRDVVTWNSILTA 420
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 172/407 (42%), Gaps = 47/407 (11%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+ + SAC L SL+ G ++H + + + + +MY +C LE A+ F +
Sbjct: 247 FGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGID 306
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
++VSW ++I CS ++A+ L +M SG+ P T ++ AC G ++ GR
Sbjct: 307 APDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRL 366
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA------ 211
+H++++K + N+L++MY + A +VF +DV +W S++ A
Sbjct: 367 MHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQH 426
Query: 212 -------FSKLGYELEAL--------------------------CHFNEMLHHGAYQPNE 238
F+ L L +L C F L + N
Sbjct: 427 LEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTMLSNG 486
Query: 239 FIFGSVFSACSNF--ARILFNEIDS-PDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
I ++ C + A LF + + D+ SW++LI G A +A+ LF+ MR+ +
Sbjct: 487 LI--DTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGV 544
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
P+ +T +L AC + +G +S + + G C+ ++ + A+ L A
Sbjct: 545 RPNHVTFVGVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAA 604
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
++ D V W +++A HN E R +L I P H
Sbjct: 605 KFVDQMPFEPDIVMWKTLLAGSKTHNDVEMGRRAAEGIL--NIDPSH 649
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 272/582 (46%), Positives = 360/582 (61%), Gaps = 48/582 (8%)
Query: 45 CSSLRSLQLGRKVHDHILLSKCQP-----DVVLQNHILNMYGKCGSLEDARMGFDKMPQR 99
CS LRS GR VH H+L S + +L NH++ MYG+C + + ARM FD M R
Sbjct: 50 CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
N VSW A+IA +QN + DA+ L+ ML+ G P +F GS ++AC+ LG + LGRQ+H
Sbjct: 110 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVH 169
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
A IKS++G HLI QNAL+ MY+K + D +F I KD+ SWGS+IA ++ G E+
Sbjct: 170 AQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREM 229
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------------ 249
+AL F EM+ G + PNEF FGSVF ACS
Sbjct: 230 DALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCS 289
Query: 250 -----------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
+ A +F I+SPDL SWN+LI ++ +EAM LFSEMR L PD
Sbjct: 290 LGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPD 349
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
G+TV +LLCAC+G L QG +HSY++K+G +V VCN++++MY +C +A+ VF
Sbjct: 350 GITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFH 409
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
E + D V+WNSI+ AC+QH E++F+LF + +S D I+ N+V+ A A++ E
Sbjct: 410 ET-NDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFE 468
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM-ENPDVVSWSSLILGY 477
M Q+H Y K GL D + N L+D Y KCGSL A KLF M DV SWSSLI+GY
Sbjct: 469 MAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGY 528
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
AQFG EAL LF RMR+LGV PN VT VGVL ACS VGLV+EG + Y IME EYGI+PT
Sbjct: 529 AQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPT 588
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+EHCSCV+DLLARAG + EA F++QM + DI++W +LLA+
Sbjct: 589 KEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAA 630
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 181/408 (44%), Gaps = 48/408 (11%)
Query: 38 YAGLISACSS-LRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+ + ACS + SL+ G ++H + K + + +MY +C L+ A F ++
Sbjct: 251 FGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRI 310
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++VSW ++I S + ++A+ L+ +M S + P T +++ AC G ++ GR
Sbjct: 311 ESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGR 370
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI------- 209
+H++++K G ++ N+LI+MYT+ A +VF +DV +W S++
Sbjct: 371 SIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHR 430
Query: 210 ----------------------------AAFSKLGY-ELEALCH---FNEMLHHGAYQPN 237
+A ++LGY E+ H F L A N
Sbjct: 431 HMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSN 490
Query: 238 EFIFGSVFSACSNF--ARILFNEIDS-PDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
I ++ C + A LF + + D+ SW++LI G A A EA+ LF+ MR+
Sbjct: 491 ALI--DTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLG 548
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ P+ +T +L AC + +G +S + + G C+ ++ + A+ L A
Sbjct: 549 VKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEA 608
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
++ D + WN+++AA HN E R +L I P H
Sbjct: 609 AKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEGVL--NIDPSH 654
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 203/609 (33%), Positives = 333/609 (54%), Gaps = 44/609 (7%)
Query: 11 KQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
+ LY EA ++ +++ T+ +++AC+ R++ GR++++ IL + D+
Sbjct: 188 QHGLYEEAFKLHE-QMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDL 246
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ ++NM+ KCG + DA FD +P R++V+WT+MI G +++ + A L+ +M +
Sbjct: 247 FVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEE 306
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
GV P + F S+++AC+ ++ G+++HA + + + + A+++MYTK + DA
Sbjct: 307 GVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDA 366
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
VF + ++V SW +MIA F++ G EA FN+M+ G +PN F S+ ACS+
Sbjct: 367 LEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG-IEPNRVTFMSILGACSS 425
Query: 251 F----------------------------------------ARILFNEIDSPDLASWNAL 270
A +F +I ++ +WNA+
Sbjct: 426 PSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAM 485
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I H + A++ F + + P+ T S+L C +L G VH I+K G
Sbjct: 486 ITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGL 545
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+S++ V NA+++M+ C L +A +F ++ K D VSWN+IIA +QH + + F F
Sbjct: 546 ESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKR-DLVSWNTIIAGFVQHGKNQVAFDYFK 604
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
M S IKPD ITF ++ ACA +L +LH IT+ DV V GL+ +Y KCG
Sbjct: 605 MMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCG 664
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
S+ A ++F+ + +V SW+S+I GYAQ G G EAL+LF +M+ GV P+ +T VG L+
Sbjct: 665 SIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALS 724
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
AC+H GL+EEGLH ++ M+ E+ I P EH C+VDL RAG ++EA +FI +M + D
Sbjct: 725 ACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDS 783
Query: 571 VVWKSLLAS 579
VW +LL +
Sbjct: 784 RVWGALLGA 792
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 180/567 (31%), Positives = 298/567 (52%), Gaps = 43/567 (7%)
Query: 2 SNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
+N ++ L K +NEA+ + ++++I+I TY+ L+ C ++L G ++++HI
Sbjct: 78 ANAVLNRLSKAGQFNEAMQVLE-RVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHI 136
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
S QPD+ + N ++NMY KCG+ A+ FD M +++V SW ++ G Q+ +A
Sbjct: 137 KKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAF 196
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
KL+ QM+Q V P + TF S++ AC+ +V GR+L+ ++K+ + L ALI M+
Sbjct: 197 KLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMH 256
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K I DA VF + +D+ +W SMI ++ G +A F M G QP++ F
Sbjct: 257 IKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGV-QPDKVAF 315
Query: 242 GSVFSACSN----------FARI------------------------------LFNEIDS 261
S+ AC++ AR+ +F+ +
Sbjct: 316 VSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKG 375
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
++ SW A+IAG A H +EA F++M + + P+ +T S+L AC L +G Q+
Sbjct: 376 RNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQI 435
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
+II+ G+ S+ V A+L+MYAKC L +A VF+++ K + V+WN++I A +QH Q
Sbjct: 436 QDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQ-NVVAWNAMITAYVQHEQ 494
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+ F +L IKP+ TF ++ C SLE+ +H I K GL D+ V N
Sbjct: 495 YDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNA 554
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+ +++ CG L SA+ LFN M D+VSW+++I G+ Q G A F M+ G+ P+
Sbjct: 555 LVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPD 614
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIM 528
+T G+L AC+ + EG L+ ++
Sbjct: 615 KITFTGLLNACASPEALTEGRRLHALI 641
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 160/592 (27%), Positives = 254/592 (42%), Gaps = 136/592 (22%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+ L+ AC+ +L+ G+KVH + ++ + IL+MY KCGS+EDA FD +
Sbjct: 315 FVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVK 374
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
RNVVSWTAMIAG +Q+ + ++A + +M++SG+ P + TF SI+ ACS ++ G+Q
Sbjct: 375 GRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQ 434
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+ H+I++ +GS + AL++MY K + DA VF I++++V +W +MI A+ +
Sbjct: 435 IQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQ 494
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------- 251
AL F +L G +PN F S+ + C +
Sbjct: 495 YDNALATFQALLKEG-IKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSN 553
Query: 252 --------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
A+ LFN++ DL SWN +IAG H A F M++ + P
Sbjct: 554 ALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKP 613
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D +T LL AC L +G ++H+ I + FD +V V +++MY KC + +A VF
Sbjct: 614 DKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVF 673
Query: 358 KELGKNADSVSWNSII-----------------------------------AAC------ 376
+L K + SW S+I +AC
Sbjct: 674 HKLPKK-NVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLI 732
Query: 377 ---LQHNQAEELFRLFSRM-----------------------LASQIKPDHITFNDVMGA 410
L H Q+ + F + RM + Q++PD + ++GA
Sbjct: 733 EEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGA 792
Query: 411 CAKMASLEMVTQLHCYITKTGLAFD-----VFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
C ++E+ + + L D VFV+ L +IY G K+ M +
Sbjct: 793 CQVHLNVELAEK----AAQKKLELDPNDNGVFVI--LSNIYAAAGMWKEVAKMRKVMLDR 846
Query: 466 DVV-----SWSSLILGYAQFGCGD-----------EALKLFTRMRSLGVSPN 501
VV SW + F D E +L MR LG P+
Sbjct: 847 GVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPD 898
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 212/414 (51%), Gaps = 13/414 (3%)
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH--- 231
NA++ +K + +A V + + + +A +L + + L + +H
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 232 GAYQPNEFIFGSV---FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
QP+ F++ ++ ++ C N A+ +F+++ D+ SWN L+ G H EA L
Sbjct: 139 SGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
+M + PD T S+L AC + +G ++++ I+K G+D+++ V A++ M+ K
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
C + +A VF L D V+W S+I +H + ++ LF RM ++PD + F
Sbjct: 259 CGDIGDATKVFDNL-PTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVS 317
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
++ AC +LE ++H + + G +++V ++ +Y KCGS+ A ++F+ ++ +
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN 377
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY- 525
VVSW+++I G+AQ G DEA F +M G+ PN VT + +L ACS ++ G +
Sbjct: 378 VVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQD 437
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
I+E YG + ++ + A+ G + +A +++ ++V W +++ +
Sbjct: 438 HIIEAGYG--SDDRVRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITA 488
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 168/319 (52%), Gaps = 3/319 (0%)
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
D D NA++ ++ NEAM + + + T +LL CI L G
Sbjct: 71 DIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGE 130
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+++++I K G ++ + N ++ MYAKC +A +F ++ + D SWN ++ +QH
Sbjct: 131 RIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDM-REKDVYSWNLLLGGYVQH 189
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
EE F+L +M+ +KPD TF ++ ACA +++ +L+ I K G D+FV
Sbjct: 190 GLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVG 249
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
L++++IKCG +G A K+F+ + D+V+W+S+I G A+ G +A LF RM GV
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
P+ V V +L AC+H +E+G ++ M+ E G + ++ + + G + +A +
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMK-EVGWDTEIYVGTAILSMYTKCGSMEDALE 368
Query: 560 FINQMACDADIVVWKSLLA 578
+ + ++V W +++A
Sbjct: 369 VFD-LVKGRNVVSWTAMIA 386
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 159/316 (50%), Gaps = 14/316 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +++ + Y+ AL + + I+ ST+ +++ C S SL+LG+ VH I+
Sbjct: 483 NAMITAYVQHEQYDNALATFQ-ALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIM 541
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + D+ + N +++M+ CG L A+ F+ MP+R++VSW +IAG Q+ + A
Sbjct: 542 KAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFD 601
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ M +SG+ P + TF ++ AC+ ++ GR+LHA + ++ ++ LI+MYT
Sbjct: 602 YFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYT 661
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I DA VF + +K+V SW SMI +++ G EAL F +M G +P+ F
Sbjct: 662 KCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGV-KPDWITFV 720
Query: 243 SVFSACSNFARIL-----FNEID----SPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
SAC++ I F + P + + ++ NEA+ +M
Sbjct: 721 GALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKM--- 777
Query: 294 ELLPDGLTVHSLLCAC 309
++ PD +LL AC
Sbjct: 778 QVEPDSRVWGALLGAC 793
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 203/609 (33%), Positives = 333/609 (54%), Gaps = 44/609 (7%)
Query: 11 KQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
+ LY EA ++ +++ T+ +++AC+ R++ GR++++ IL + D+
Sbjct: 188 QHGLYEEAFKLHE-QMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDL 246
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ ++NM+ KCG + DA FD +P R++V+WT+MI G +++ + A L+ +M +
Sbjct: 247 FVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEE 306
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
GV P + F S+++AC+ ++ G+++HA + + + + A+++MYTK + DA
Sbjct: 307 GVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDA 366
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
VF + ++V SW +MIA F++ G EA FN+M+ G +PN F S+ ACS+
Sbjct: 367 LEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG-IEPNRVTFMSILGACSS 425
Query: 251 F----------------------------------------ARILFNEIDSPDLASWNAL 270
A +F +I ++ +WNA+
Sbjct: 426 PSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAM 485
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I H + A++ F + + P+ T S+L C +L G VH I+K G
Sbjct: 486 ITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGL 545
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+S++ V NA+++M+ C L +A +F ++ K D VSWN+IIA +QH + + F F
Sbjct: 546 ESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKR-DLVSWNTIIAGFVQHGKNQVAFDYFK 604
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
M S IKPD ITF ++ ACA +L +LH IT+ DV V GL+ +Y KCG
Sbjct: 605 MMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCG 664
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
S+ A ++F+ + +V SW+S+I GYAQ G G EAL+LF +M+ GV P+ +T VG L+
Sbjct: 665 SIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALS 724
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
AC+H GL+EEGLH ++ M+ E+ I P EH C+VDL RAG ++EA +FI +M + D
Sbjct: 725 ACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDS 783
Query: 571 VVWKSLLAS 579
VW +LL +
Sbjct: 784 RVWGALLGA 792
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 188/622 (30%), Positives = 318/622 (51%), Gaps = 55/622 (8%)
Query: 2 SNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
+N ++ L K +NEA+ + ++++I+I TY+ L+ C ++L G ++++HI
Sbjct: 78 ANAVLNRLSKAGQFNEAMQVLE-RVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHI 136
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
S QPD+ ++N ++NMY KCG+ A+ FD M +++V SW ++ G Q+ +A
Sbjct: 137 KKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAF 196
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
KL+ QM+Q V P + TF S++ AC+ +V GR+L+ ++K+ + L ALI M+
Sbjct: 197 KLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMH 256
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K I DA VF + +D+ +W SMI ++ G +A F M G QP++ F
Sbjct: 257 IKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGV-QPDKVAF 315
Query: 242 GSVFSACSN----------FARI------------------------------LFNEIDS 261
S+ AC++ AR+ +F+ +
Sbjct: 316 VSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKG 375
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
++ SW A+IAG A H +EA F++M + + P+ +T S+L AC L +G Q+
Sbjct: 376 RNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQI 435
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
+II+ G+ S+ V A+L+MYAKC L +A VF+++ K + V+WN++I A +QH Q
Sbjct: 436 QDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQ-NVVAWNAMITAYVQHEQ 494
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+ F +L IKP+ TF ++ C SLE+ +H I K GL D+ V N
Sbjct: 495 YDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNA 554
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+ +++ CG L SA+ LFN M D+VSW+++I G+ Q G A F M+ G+ P+
Sbjct: 555 LVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPD 614
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV-----DLLARAGCVHE 556
+T G+L AC+ + EG L+ + I C +V + + G + +
Sbjct: 615 KITFTGLLNACASPEALTEGRRLHAL------ITEAAFDCDVLVGTGLISMYTKCGSIED 668
Query: 557 AEDFINQMACDADIVVWKSLLA 578
A +++ ++ W S++A
Sbjct: 669 AHQVFHKLP-KKNVYSWTSMIA 689
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 161/592 (27%), Positives = 254/592 (42%), Gaps = 136/592 (22%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+ L+ AC+ +L+ G+KVH + ++ + IL+MY KCGS+EDA FD +
Sbjct: 315 FVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVK 374
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
RNVVSWTAMIAG +Q+ + ++A + +M++SG+ P + TF SI+ ACS ++ G+Q
Sbjct: 375 GRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQ 434
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+ H+I++ +GS + AL++MY K + DA VF I++++V +W +MI A+ +
Sbjct: 435 IQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQ 494
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------- 251
AL F +L G +PN F S+ + C +
Sbjct: 495 YDNALATFQALLKEG-IKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSN 553
Query: 252 --------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
A+ LFN++ DL SWN +IAG H A F M++ + P
Sbjct: 554 ALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKP 613
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D +T LL AC L +G ++H+ I + FD +V V +++MY KC + +A VF
Sbjct: 614 DKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVF 673
Query: 358 KELGKNADSVSWNSIIA-----------------------------------AC------ 376
+L K + SW S+IA AC
Sbjct: 674 HKLPKK-NVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLI 732
Query: 377 ---LQHNQAEELFRLFSRM-----------------------LASQIKPDHITFNDVMGA 410
L H Q+ + F + RM + Q++PD + ++GA
Sbjct: 733 EEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGA 792
Query: 411 CAKMASLEMVTQLHCYITKTGLAFD-----VFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
C ++E+ + + L D VFV+ L +IY G K+ M +
Sbjct: 793 CQVHLNVELAEK----AAQKKLELDPNDNGVFVI--LSNIYAAAGMWKEVAKMRKVMLDR 846
Query: 466 DVV-----SWSSLILGYAQFGCGD-----------EALKLFTRMRSLGVSPN 501
VV SW + F D E +L MR LG P+
Sbjct: 847 GVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPD 898
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 211/414 (50%), Gaps = 13/414 (3%)
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH--- 231
NA++ +K + +A V + + + +A +L + + L + +H
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 232 GAYQPNEFIFGSV---FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
QP+ F+ ++ ++ C N A+ +F+++ D+ SWN L+ G H EA L
Sbjct: 139 SGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
+M + PD T S+L AC + +G ++++ I+K G+D+++ V A++ M+ K
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
C + +A VF L D V+W S+I +H + ++ LF RM ++PD + F
Sbjct: 259 CGDIGDATKVFDNL-PTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVS 317
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
++ AC +LE ++H + + G +++V ++ +Y KCGS+ A ++F+ ++ +
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN 377
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY- 525
VVSW+++I G+AQ G DEA F +M G+ PN VT + +L ACS ++ G +
Sbjct: 378 VVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQD 437
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
I+E YG + ++ + A+ G + +A +++ ++V W +++ +
Sbjct: 438 HIIEAGYG--SDDRVRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITA 488
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 168/319 (52%), Gaps = 3/319 (0%)
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
D D NA++ ++ NEAM + + + T +LL CI L G
Sbjct: 71 DIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGE 130
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+++++I K G ++ + N ++ MYAKC +A +F ++ + D SWN ++ +QH
Sbjct: 131 RIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDM-REKDVYSWNLLLGGYVQH 189
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
EE F+L +M+ +KPD TF ++ ACA +++ +L+ I K G D+FV
Sbjct: 190 GLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVG 249
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
L++++IKCG +G A K+F+ + D+V+W+S+I G A+ G +A LF RM GV
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
P+ V V +L AC+H +E+G ++ M+ E G + ++ + + G + +A +
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMK-EVGWDTEIYVGTAILSMYTKCGSMEDALE 368
Query: 560 FINQMACDADIVVWKSLLA 578
+ + ++V W +++A
Sbjct: 369 VFD-LVKGRNVVSWTAMIA 386
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 160/316 (50%), Gaps = 14/316 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +++ + Y+ AL + + I+ ST+ +++ C S SL+LG+ VH I+
Sbjct: 483 NAMITAYVQHEQYDNALATFQ-ALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIM 541
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + D+ + N +++M+ CG L A+ F+ MP+R++VSW +IAG Q+ + A
Sbjct: 542 KAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFD 601
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ M +SG+ P + TF ++ AC+ ++ GR+LHA + ++ ++ LI+MYT
Sbjct: 602 YFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYT 661
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I DA VF + +K+V SW SMIA +++ G EAL F +M G +P+ F
Sbjct: 662 KCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGV-KPDWITFV 720
Query: 243 SVFSACSNFARIL-----FNEID----SPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
SAC++ I F + P + + ++ NEA+ +M
Sbjct: 721 GALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKM--- 777
Query: 294 ELLPDGLTVHSLLCAC 309
++ PD +LL AC
Sbjct: 778 QVEPDSRVWGALLGAC 793
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 201/619 (32%), Positives = 336/619 (54%), Gaps = 49/619 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDH 60
N + +L L++EAL Y +Q IR++P TY +I+AC+ L ++ + +HD
Sbjct: 143 NSIIRALTHNGLFSEALSLYSETQR---IRLQPDTYTFPSVINACAGLLDFEMAKSIHDR 199
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+L D+ + N +++MY + L+ AR F++MP R+VVSW ++I+G + N N+A
Sbjct: 200 VLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEA 259
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+++Y + GV+P +T S+++AC GLGSV G +H + K +I N L++M
Sbjct: 260 LEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSM 319
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y KF+ ++D R +F + +D SW +MI +S++G E++ F EM++ ++P+
Sbjct: 320 YCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ--FKPDLLT 377
Query: 241 FGSVFSACSNFARI----------------------------------------LFNEID 260
S+ AC + + +F+ +
Sbjct: 378 ITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMK 437
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D SWN++I + + +EAM LF M+ ++ PD +T LL L G +
Sbjct: 438 CKDSVSWNSMINVYIQNGSFDEAMKLFKMMKT-DVKPDSVTYVMLLSMSTQLGDLXLGKE 496
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H + KMGF+SN+ V N ++ MYAKC + ++L VF+ + K D ++WN+IIA+C+
Sbjct: 497 LHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENM-KARDIITWNTIIASCVHSE 555
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
R+ SRM + PD T ++ C+ +A+ ++H I K GL DV V N
Sbjct: 556 DCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGN 615
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+++Y KCGSL ++ ++F M+ DVV+W++LI +G G +A++ F M + G+ P
Sbjct: 616 VLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVP 675
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ V V ++ ACSH GLVEEGL+ + M+ +Y I P EH +CVVDLL+R+ + +AEDF
Sbjct: 676 DHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDF 735
Query: 561 INQMACDADIVVWKSLLAS 579
I M D +W +LL++
Sbjct: 736 ILSMPLKPDSSIWGALLSA 754
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/523 (27%), Positives = 259/523 (49%), Gaps = 46/523 (8%)
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P NV W ++I + N ++A+ LY + + + P +TF S+I AC+GL + +
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 194
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H V+ GS L NALI MY +F+ + AR VF + +DV SW S+I+ ++ G
Sbjct: 195 SIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 254
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
Y EAL + + G P+ + SV AC
Sbjct: 255 YWNEALEIYYRFRNLGVV-PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 313
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
R +F+++ D SWN +I G + E++ LF EM + +
Sbjct: 314 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFK 372
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD LT+ S+L AC L G VH Y+I G++ + N ++ MYAKC L + V
Sbjct: 373 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 432
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + K DSVSWNS+I +Q+ +E +LF +M+ + +KPD +T+ ++ ++
Sbjct: 433 FSGM-KCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGD 490
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L + +LHC + K G ++ V N L+D+Y KCG +G + K+F M+ D+++W+++I
Sbjct: 491 LXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIAS 550
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
+ L++ +RMR+ GV+P++ T++ +L CS + +G ++ + + G+
Sbjct: 551 CVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCI-FKLGLES 609
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++++ ++ G + + M D+V W +L+++
Sbjct: 610 DVPVGNVLIEMYSKCGSLRNSFQVFKLMKT-KDVVTWTALISA 651
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 115/217 (52%)
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
T Q ++HS II +G +V ++ YA ++ VF+ + + WNSII
Sbjct: 87 TTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSII 146
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
A + E L+S +++PD TF V+ ACA + EM +H + G
Sbjct: 147 RALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFG 206
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
D+++ N L+D+Y + L ARK+F M DVVSW+SLI GY G +EAL+++ R
Sbjct: 207 SDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRF 266
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
R+LGV P+ T+ VL AC +G VEEG ++ ++E
Sbjct: 267 RNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEK 303
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 190/443 (42%), Gaps = 50/443 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T ++ AC L L+ G+ VHD+++ S + D N ++NMY KCG+L ++ F M
Sbjct: 377 TITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGM 436
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++ VSW +MI QN ++A+KL+ +M+++ V P T+ ++ + LG + LG+
Sbjct: 437 KCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGK 495
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA------ 210
+LH + K S+++ N L+ MY K + D+ VF + +D+ +W ++IA
Sbjct: 496 ELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSE 555
Query: 211 ----------------------------------AFSKLGYELEALCHFNEMLHHGAYQP 236
A + G E+ C F L
Sbjct: 556 DCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHG-CIFKLGLESDVPVG 614
Query: 237 NEFIFGSVFSACSNFARI--LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
N I ++S C + +F + + D+ +W ALI+ + +A+ F EM
Sbjct: 615 NVLI--EMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAG 672
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
++PD + +++ AC + +G+ H + + ++ + ++ ++L A
Sbjct: 673 IVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKA 732
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND-VMGACA 412
+ DS W ++++AC E R+ R++ ++ PD + V A
Sbjct: 733 EDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERII--ELNPDDTGYYVLVSNVYA 790
Query: 413 KMASLEMVTQLHCYITKTGLAFD 435
+ + V + I GL D
Sbjct: 791 ALGKWDQVRSIRKSIKARGLKKD 813
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 201/619 (32%), Positives = 337/619 (54%), Gaps = 49/619 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDH 60
N + +L L++EAL Y +Q IR++P TY +I+AC+ L ++ + +HD
Sbjct: 84 NSIIRALTHNGLFSEALSLYSETQR---IRLQPDTYTFPSVINACAGLLDFEMAKSIHDR 140
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+L D+ + N +++MY + L+ AR F++MP R+VVSW ++I+G + N N+A
Sbjct: 141 VLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEA 200
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+++Y + GV+P +T S+++AC GLGSV G +H + K +I N L++M
Sbjct: 201 LEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSM 260
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y KF+ ++D R +F + +D SW +MI +S++G E++ F EM++ ++P+
Sbjct: 261 YCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ--FKPDLLT 318
Query: 241 FGSVFSACSNFARI----------------------------------------LFNEID 260
S+ AC + + +F+ +
Sbjct: 319 ITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMK 378
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D SWN++I + + +EAM LF M+ ++ PD +T LL L+ G +
Sbjct: 379 CKDSVSWNSMINVYIQNGSFDEAMKLFKMMK-TDVKPDSVTYVMLLSMSTQLGDLHLGKE 437
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H + KMGF+SN+ V N ++ MYAKC + ++L VF+ + K D ++WN+IIA+C+
Sbjct: 438 LHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENM-KARDIITWNTIIASCVHSE 496
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
R+ SRM + PD T ++ C+ +A+ ++H I K GL DV V N
Sbjct: 497 DCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGN 556
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+++Y KCGSL ++ ++F M+ DVV+W++LI +G G +A++ F M + G+ P
Sbjct: 557 VLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVP 616
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ V V ++ ACSH GLVEEGL+ + M+ +Y I P EH +CVVDLL+R+ + +AEDF
Sbjct: 617 DHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDF 676
Query: 561 INQMACDADIVVWKSLLAS 579
I M D +W +LL++
Sbjct: 677 ILSMPLKPDSSIWGALLSA 695
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/523 (27%), Positives = 259/523 (49%), Gaps = 46/523 (8%)
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P NV W ++I + N ++A+ LY + + + P +TF S+I AC+GL + +
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H V+ GS L NALI MY +F+ + AR VF + +DV SW S+I+ ++ G
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
Y EAL + + G P+ + SV AC
Sbjct: 196 YWNEALEIYYRFRNLGVV-PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 254
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
R +F+++ D SWN +I G + E++ LF EM + +
Sbjct: 255 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFK 313
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD LT+ S+L AC L G VH Y+I G++ + N ++ MYAKC L + V
Sbjct: 314 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 373
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + K DSVSWNS+I +Q+ +E +LF +M+ + +KPD +T+ ++ ++
Sbjct: 374 FSGM-KCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGD 431
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L + +LHC + K G ++ V N L+D+Y KCG +G + K+F M+ D+++W+++I
Sbjct: 432 LHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIAS 491
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
+ L++ +RMR+ GV+P++ T++ +L CS + +G ++ + + G+
Sbjct: 492 CVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCI-FKLGLES 550
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++++ ++ G + + M D+V W +L+++
Sbjct: 551 DVPVGNVLIEMYSKCGSLRNSFQVFKLMKT-KDVVTWTALISA 592
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 115/217 (52%)
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
T Q ++HS II +G +V ++ YA ++ VF+ + + WNSII
Sbjct: 28 TTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSII 87
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
A + E L+S +++PD TF V+ ACA + EM +H + G
Sbjct: 88 RALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFG 147
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
D+++ N L+D+Y + L ARK+F M DVVSW+SLI GY G +EAL+++ R
Sbjct: 148 SDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRF 207
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
R+LGV P+ T+ VL AC +G VEEG ++ ++E
Sbjct: 208 RNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEK 244
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 200/471 (42%), Gaps = 52/471 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T ++ AC L L+ G+ VHD+++ S + D N ++NMY KCG+L ++ F M
Sbjct: 318 TITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGM 377
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++ VSW +MI QN ++A+KL+ +M+++ V P T+ ++ + LG + LG+
Sbjct: 378 KCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGK 436
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA------ 210
+LH + K S+++ N L+ MY K + D+ VF + +D+ +W ++IA
Sbjct: 437 ELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSE 496
Query: 211 ----------------------------------AFSKLGYELEALCHFNEMLHHGAYQP 236
A + G E+ C F L
Sbjct: 497 DCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHG-CIFKLGLESDVPVG 555
Query: 237 NEFIFGSVFSACSNFARI--LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
N I ++S C + +F + + D+ +W ALI+ + +A+ F EM
Sbjct: 556 NVLI--EMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAG 613
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
++PD + +++ AC + +G+ H + + ++ + ++ ++L A
Sbjct: 614 IVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKA 673
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC-A 412
+ DS W ++++AC E R+ R++ ++ PD + ++ A
Sbjct: 674 EDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERII--ELNPDDTGYYVLVSNIYA 731
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
+ + V + I GL D M+I K G+ K F E
Sbjct: 732 ALGKWDQVRSIRKSIKARGLKKDPGC--SWMEIQNKVYVFGTGTKFFEQFE 780
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 199/589 (33%), Positives = 324/589 (55%), Gaps = 45/589 (7%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++P T+ +++AC+ +++ G ++ IL + D+ + ++NM+ KCG ++DA
Sbjct: 201 VKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDAL 260
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F+ +P+R++++WT+MI G +++ Q A L+ M + GV P + F S++KAC+
Sbjct: 261 KVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPE 320
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G+++HA + + + + AL++MYTK + DA VF+ + ++V SW +MIA
Sbjct: 321 ALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIA 380
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------- 251
F++ G EA FN+M+ G +PN F S+ ACS
Sbjct: 381 GFAQHGRMEEAFLFFNKMIESG-IEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYI 439
Query: 252 ---------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
AR +F I ++ +WNA+I H + A++ F +
Sbjct: 440 TDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQAL 499
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ PD T S+L C L G V S II+ GF+S++ + NA+++M+ C L
Sbjct: 500 LKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDL 559
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
+A+ +F ++ + D VSWN+IIA +QH + + F F M S +KPD ITF ++ A
Sbjct: 560 MSAMNLFNDMPER-DLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNA 618
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
CA +L +LH IT+ L DV V GL+ +Y KCGS+ A +F+ + +V SW
Sbjct: 619 CASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSW 678
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
+S+I GYAQ G G EAL+LF +M+ GV P+ +T VG L+AC+H GL++EGLH + M+
Sbjct: 679 TSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMK- 737
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++ I P EH C+VDL RAG +HEA +FIN+M D +W +LL +
Sbjct: 738 DFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGA 786
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/567 (30%), Positives = 298/567 (52%), Gaps = 43/567 (7%)
Query: 2 SNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
+N +++ L K +EA++ S ++ +I+I TY+ L+ C ++L G ++H+HI
Sbjct: 72 ANAFLNRLSKAGQLSEAMLVL-LSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHI 130
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
SK QPD+ + N +++MY KCG+ A+ FD+MP ++V SW ++ G Q+ + +A
Sbjct: 131 KFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAF 190
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+L+ QM+Q GV P ++TF ++ AC+ +V G +L + ++ + + L ALI M+
Sbjct: 191 RLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMH 250
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K + DA VF+ + R+D+ +W SMI ++ + + C+ +++ QP++ F
Sbjct: 251 IKCGGVDDALKVFNNLPRRDLITWTSMITGLAR-HRQFKQACNLFQVMEEEGVQPDKVAF 309
Query: 242 GSVFSACSN----------FARI------------------------------LFNEIDS 261
S+ AC++ AR+ +FN +
Sbjct: 310 VSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKG 369
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
++ SW A+IAG A H EA F++M + + P+ +T S+L AC L QG Q+
Sbjct: 370 RNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQI 429
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H IIK G+ ++ V A+L+MYAKC L +A VF+ + K + V+WN++I A +QH +
Sbjct: 430 HDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQ-NVVAWNAMITAYVQHEK 488
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+ F +L IKPD TF ++ C +LE+ + I + G D+ + N
Sbjct: 489 YDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNA 548
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+ +++ CG L SA LFN M D+VSW+++I G+ Q G A F M+ GV P+
Sbjct: 549 LVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPD 608
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIM 528
+T G+L AC+ + EG L+ ++
Sbjct: 609 QITFTGLLNACASPEALTEGRRLHALI 635
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 248/520 (47%), Gaps = 44/520 (8%)
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+N A + S+ Q ++A+ + + + + + T+ S+++ C ++ G ++
Sbjct: 67 KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERI 126
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H H+ S+ + N LI+MY K A+ +F + KDV SW ++ + +
Sbjct: 127 HNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRY 186
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARIL------------- 255
EA +M+ G +P+++ F + +AC++ F+ IL
Sbjct: 187 EEAFRLHEQMVQDGV-KPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTA 245
Query: 256 -----------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
FN + DL +W ++I G+A H +A +LF M + + PD
Sbjct: 246 LINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPD 305
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+ SLL AC L QG +VH+ + ++G D+ + V A+L+MY KC + +AL VF
Sbjct: 306 KVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFN 365
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
L K + VSW ++IA QH + EE F F++M+ S I+P+ +TF ++GAC++ ++L+
Sbjct: 366 -LVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALK 424
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
Q+H I K G D V L+ +Y KCGSL AR +F + +VV+W+++I Y
Sbjct: 425 QGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYV 484
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
Q D A+ F + G+ P+ T +L C +E G + ++ G
Sbjct: 485 QHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRA-GFESDL 543
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +V + G + A + N M + D+V W +++A
Sbjct: 544 HIRNALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWNTIIA 582
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 193/351 (54%), Gaps = 10/351 (2%)
Query: 235 QPNEFIFG---SVFSAC--SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
QP+ F++ S+++ C +N A+ +F+E+ D+ SWN L+ G H EA L +
Sbjct: 136 QPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQ 195
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M + PD T +L AC + +G ++ S I+ G+D+++ V A++ M+ KC
Sbjct: 196 MVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGG 255
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ +AL VF L + D ++W S+I +H Q ++ LF M ++PD + F ++
Sbjct: 256 VDDALKVFNNLPRR-DLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLK 314
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
AC +LE ++H + + GL +++V L+ +Y KCGS+ A ++FN ++ +VVS
Sbjct: 315 ACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVS 374
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIM 528
W+++I G+AQ G +EA F +M G+ PN VT + +L ACS +++G ++ RI+
Sbjct: 375 WTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRII 434
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ G I + ++ + A+ G + +A + +++ ++V W +++ +
Sbjct: 435 KA--GYITDDRVRTALLSMYAKCGSLMDARNVFERIS-KQNVVAWNAMITA 482
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 190/393 (48%), Gaps = 43/393 (10%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I P+ T+ ++ ACS +L+ GR++HD I+ + D ++ +L+MY KCGSL DAR
Sbjct: 403 IEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDAR 462
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F+++ ++NVV+W AMI Q+ + ++A+ + +L+ G+ P TF SI+ C
Sbjct: 463 NVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPD 522
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ LG+ + + +I++ S L +NAL++M+ ++ A N+F+ + +D+ SW ++IA
Sbjct: 523 ALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIA 582
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------- 249
F + G A +F +M+ +P++ F + +AC+
Sbjct: 583 GFVQHGENQFAFDYF-KMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALD 641
Query: 250 -------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ A ++F+ + ++ SW ++I G A H EA+ LF +M
Sbjct: 642 CDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQM 701
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ + PD +T L AC + +G+ + + + ++ ++ + +L
Sbjct: 702 QQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKDFNIEPRMEHYGCMVDLFGRAGLL 761
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
A+ ++ DS W +++ AC H E
Sbjct: 762 HEAVEFINKMQVKPDSRLWGALLGACQVHLDVE 794
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 164/320 (51%), Gaps = 3/320 (0%)
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+D + NA + ++ +EAM + + + T SLL CI L G
Sbjct: 64 VDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDG 123
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
++H++I ++ + N +++MYAKC +A +F E+ + D SWN ++ +Q
Sbjct: 124 ERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEM-PDKDVYSWNLLLGGYVQ 182
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
H + EE FRL +M+ +KPD TF ++ ACA +++ +L I G D+FV
Sbjct: 183 HRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFV 242
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
L++++IKCG + A K+FN + D+++W+S+I G A+ +A LF M GV
Sbjct: 243 GTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGV 302
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAE 558
P+ V V +L AC+H +E+G ++ M+ E G+ + ++ + + G + +A
Sbjct: 303 QPDKVAFVSLLKACNHPEALEQGKRVHARMK-EVGLDTEIYVGTALLSMYTKCGSMEDAL 361
Query: 559 DFINQMACDADIVVWKSLLA 578
+ N + ++V W +++A
Sbjct: 362 EVFN-LVKGRNVVSWTAMIA 380
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 159/316 (50%), Gaps = 14/316 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +++ + Y+ A+ + + I+ ST+ +++ C S +L+LG+ V I+
Sbjct: 477 NAMITAYVQHEKYDNAVATFQ-ALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLII 535
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + D+ ++N +++M+ CG L A F+ MP+R++VSW +IAG Q+ + A
Sbjct: 536 RAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFD 595
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ M +SGV P Q TF ++ AC+ ++ GR+LHA + ++ ++ LI+MYT
Sbjct: 596 YFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYT 655
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I DA VF + +K+V SW SMI +++ G EAL F +M G +P+ F
Sbjct: 656 KCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGV-KPDWITFV 714
Query: 243 SVFSACSNFARIL-----FNEID----SPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
SAC++ I F + P + + ++ +EA+ ++M
Sbjct: 715 GALSACAHAGLIKEGLHHFESMKDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKM--- 771
Query: 294 ELLPDGLTVHSLLCAC 309
++ PD +LL AC
Sbjct: 772 QVKPDSRLWGALLGAC 787
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 195/584 (33%), Positives = 314/584 (53%), Gaps = 42/584 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T +S+C S +L+ GR++H + + DV + N ILNMY KCGS+E+AR FDK
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M +++VVSWT I G + + A +++ +M Q GV+P + T+ S++ A S ++ G
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ +H+ ++ + H S AL+ MY K D R VF + +D+ +W +MI ++
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 306
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
GY EA +N+M G PN+ + + +AC N
Sbjct: 307 GYWEEASEVYNQMQREGV-MPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGV 365
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR++F+++ D+ SW A+I G+A EA++++ EM+ +
Sbjct: 366 QNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGV 425
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ +T S+L AC L G ++H +++ G ++ V N ++ MY+ C + +A
Sbjct: 426 EPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQ 485
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF + + D V++N++I HN +E +LF R+ +KPD +T+ +++ ACA
Sbjct: 486 VFDRMIQR-DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSG 544
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
SLE ++H + K G D V N L+ Y KCGS A +F M +V+SW+++I
Sbjct: 545 SLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIG 604
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
G AQ G G +AL+LF RM+ GV P++VT V +L+ACSH GL+EEG + M ++ II
Sbjct: 605 GSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAII 664
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
PT EH C+VDLL RAG + EAE I M A+ +W +LL +
Sbjct: 665 PTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGA 708
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 167/589 (28%), Positives = 299/589 (50%), Gaps = 46/589 (7%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
++ S Y ++ C ++ L GR+VH HI+ + PD N ++NMY +CGS+E+AR
Sbjct: 20 QVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQ 79
Query: 92 GFDKMP--QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
+ K+ +R V SW AM+ G Q A+KL QM Q G+ P + T S + +C
Sbjct: 80 VWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSP 139
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G++ GR++H +++ + N ++ MY K I +AR VF + +K V SW I
Sbjct: 140 GALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITI 199
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA----------------- 252
++ G A F +M G PN + SV +A S+ A
Sbjct: 200 GGYADCGRSETAFEIFQKMEQEGVV-PNRITYISVLNAFSSPAALKWGKAVHSRILNAGH 258
Query: 253 -----------------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
R +F ++ + DL +WN +I G+A EA ++++
Sbjct: 259 ESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQ 318
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M+ ++P+ +T LL AC+ L+ G ++HS + K GF S++ V NA+++MY++C
Sbjct: 319 MQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGS 378
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ +A LVF ++ + D +SW ++I + E ++ M + ++P+ +T+ ++
Sbjct: 379 IKDARLVFDKMVRK-DVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILN 437
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
AC+ A+LE ++H + + GLA D V N L+++Y CGS+ AR++F+ M D+V+
Sbjct: 438 ACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVA 497
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
++++I GYA G EALKLF R++ G+ P+ VT + +L AC++ G +E ++ ++
Sbjct: 498 YNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVR 557
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G + +V A+ G +A +M +++ W +++
Sbjct: 558 KG-GFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT-KRNVISWNAIIG 604
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 238/505 (47%), Gaps = 46/505 (9%)
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+++ A+ + + Q G + ++K C + + GRQ+H H+I+ N
Sbjct: 3 EKDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVN 62
Query: 176 ALIAMYTKFDRILDARNVFSGIA--RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA 233
ALI MY + I +AR V+ ++ + V SW +M+ + + GY +AL +M HG
Sbjct: 63 ALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHG- 121
Query: 234 YQPNEFIFGSVFSACSN----------------------------------------FAR 253
P+ S S+C + AR
Sbjct: 122 LAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAR 181
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
+F++++ + SW I G A + A +F +M ++P+ +T S+L A
Sbjct: 182 EVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPA 241
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
L G VHS I+ G +S+ V A++ MYAKC + VF++L N D ++WN++I
Sbjct: 242 ALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMI 300
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
+ EE ++++M + P+ IT+ ++ AC A+L ++H + K G
Sbjct: 301 GGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFT 360
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
D+ V N L+ +Y +CGS+ AR +F+ M DV+SW+++I G A+ G G EAL ++ M
Sbjct: 361 SDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEM 420
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
+ GV PN VT +L ACS +E G +++ + E G+ + +V++ + G
Sbjct: 421 QQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVV-EAGLATDAHVGNTLVNMYSMCGS 479
Query: 554 VHEAEDFINQMACDADIVVWKSLLA 578
V +A ++M DIV + +++
Sbjct: 480 VKDARQVFDRM-IQRDIVAYNAMIG 503
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 199/585 (34%), Positives = 325/585 (55%), Gaps = 46/585 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
++ A ++ AC +L +G +VH ++ DVV + +L MY KC L+D+ F +
Sbjct: 182 ASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSE 241
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+P++N VSW+AMIAGC QN + + ++L+ +M GV Q + S+ ++C+ L ++ LG
Sbjct: 242 LPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLG 301
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
++LH+H +KS GS +I A + MY K R+ DA+ V S + + + S+ ++I +++
Sbjct: 302 KELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARS 361
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
+AL F +L G +E +AC++
Sbjct: 362 DRGFQALKSFQLLLKTG-LGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICV 420
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A LF+ ++ D SWNA+IA + N E ++ F+ M +
Sbjct: 421 ANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRM 480
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK--MGFDSNVPVCNAILTMYAKCSVLCNA 353
PD T S+L AC GR L GM++H+ IIK MGFDS V A++ MY KC ++ A
Sbjct: 481 EPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGA--ALVDMYCKCGMIEKA 538
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
+ + + VSWN+II+ Q+E+ + FSRML + PD+ T+ V+ CA
Sbjct: 539 DKI-HDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCAN 597
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+A++ + Q+H I K L DV++ + L+D+Y KCG++ ++ +F N D V+W+++
Sbjct: 598 LATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAM 657
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
+ GYA G G+EALKLF M+ + V PN T V VL AC+H+GLV++GLH + +M +EYG
Sbjct: 658 LCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYG 717
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ P EH SC+VD+L R+G + EA + + +M +AD V+W++LL+
Sbjct: 718 LDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLS 762
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 179/626 (28%), Positives = 303/626 (48%), Gaps = 77/626 (12%)
Query: 24 FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQP--------------- 68
+QN T + T++ + CS SL G++ H ++ +P
Sbjct: 38 LAQNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKC 97
Query: 69 ----------------DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCS 112
DVV N I++ Y CG ++ AR F +MP+R+VVSW ++I+G
Sbjct: 98 LYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFL 157
Query: 113 QNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
QN + +I ++++M + GV + + ++KAC L +G Q+H V+K ++
Sbjct: 158 QNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVV 217
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
+AL+ MY K R+ D+ +VFS + K+ SW +MIA + +E L F EM G
Sbjct: 218 TGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVG 277
Query: 233 AYQPNEFIFGSVFSACSNF----------------------------------------A 252
++ I+ S+F +C+ A
Sbjct: 278 V-GVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADA 336
Query: 253 RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
+ + + + L S+NA+I G A +A+ F + L D +T+ L AC
Sbjct: 337 QKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASI 396
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
+G QVH +K SN+ V NAIL MY KC L A +F ++ + D+VSWN+I
Sbjct: 397 RGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLF-DMMERRDAVSWNAI 455
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
IAAC Q+ EE F+ M+ S+++PD T+ V+ ACA +L ++H I K+G+
Sbjct: 456 IAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGM 515
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
FD FV L+D+Y KCG + A K+ + E +VSW+++I G++ ++A K F+R
Sbjct: 516 GFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSR 575
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARA 551
M +GV+P+ T VL C+++ V G ++ +I++ E + CS +VD+ ++
Sbjct: 576 MLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQE--LQSDVYICSTLVDMYSKC 633
Query: 552 GCVHEAEDFINQMACDADIVVWKSLL 577
G + +++ + + A + D V W ++L
Sbjct: 634 GNMQDSQ-LMFEKAPNRDFVTWNAML 658
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 147/510 (28%), Positives = 251/510 (49%), Gaps = 50/510 (9%)
Query: 10 CKQNLYN-EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQP 68
C QN N E L + Q + + S YA L +C++L +L+LG+++H H L S
Sbjct: 257 CVQNDRNVEGLELFKEMQG-VGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGS 315
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D+++ L+MY KCG + DA+ MP+ ++ S+ A+I G +++ + A+K + +L
Sbjct: 316 DIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLL 375
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
++G+ + T + AC+ + GRQ+H +KS S++ NA++ MY K +
Sbjct: 376 KTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALA 435
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
+A ++F + R+D SW ++IAA + G E E L HF M+ H +P++F +GSV AC
Sbjct: 436 EASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMI-HSRMEPDDFTYGSVLKAC 494
Query: 249 SN----------FARI------------------------------LFNEIDSPDLASWN 268
+ RI + + + + SWN
Sbjct: 495 AGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWN 554
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
A+I+G + + +A FS M + + PD T ++L C T+ G Q+H+ IIK
Sbjct: 555 AIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQ 614
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
S+V +C+ ++ MY+KC + ++ L+F E N D V+WN+++ H EE +L
Sbjct: 615 ELQSDVYICSTLVDMYSKCGNMQDSQLMF-EKAPNRDFVTWNAMLCGYAHHGLGEEALKL 673
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY---ITKTGLAFDVFVMNGLMDI 445
F M +KP+H TF V+ ACA M ++ LH + +++ GL + ++DI
Sbjct: 674 FESMQLVNVKPNHATFVSVLRACAHMGLVD--KGLHYFDVMLSEYGLDPQSEHYSCMVDI 731
Query: 446 YIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
+ G + A L M D V W +L+
Sbjct: 732 LGRSGRIDEALNLVQKMPFEADAVIWRNLL 761
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 194/427 (45%), Gaps = 54/427 (12%)
Query: 10 CKQNLYNEALVAYDFSQN------------NTNIRIRPSTYAGLISACSSLRSLQLGRKV 57
C YN +V Y S T + T +G ++AC+S+R GR+V
Sbjct: 346 CSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQV 405
Query: 58 HDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQE 117
H + S ++ + N IL+MYGKC +L +A FD M +R+ VSW A+IA C QN E
Sbjct: 406 HGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNE 465
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
+ + + M+ S + P FT+GS++KAC+G ++ G ++H +IKS G AL
Sbjct: 466 EETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAAL 525
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
+ MY K I A + +K + SW ++I+ FS L +A F+ ML G P+
Sbjct: 526 VDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGV-NPD 584
Query: 238 EFIFGSVFSACSNFA----------------------------------------RILFN 257
F + +V C+N A +++F
Sbjct: 585 NFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFE 644
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
+ + D +WNA++ G A H EA+ LF M+ + P+ T S+L AC + +
Sbjct: 645 KAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDK 704
Query: 318 GMQVHSYII-KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
G+ ++ + G D + ++ + + + AL + +++ AD+V W ++++ C
Sbjct: 705 GLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVC 764
Query: 377 LQHNQAE 383
H E
Sbjct: 765 KIHGNVE 771
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 214/444 (48%), Gaps = 38/444 (8%)
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
TF I + CS S+ G+Q HA +I N L+ MY K + A VF +
Sbjct: 51 TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFN 257
+DV S+ S+I+ ++ G EM + AR F
Sbjct: 111 YLRDVVSYNSIISGYASCG----------EM---------------------DIARKFFY 139
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
E+ D+ SWN++I+G + +++ +F EM + D ++ +L AC
Sbjct: 140 EMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDM 199
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G+QVH ++K GFD +V +A+L MYAKC L ++L VF EL + + VSW+++IA C+
Sbjct: 200 GVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEK-NWVSWSAMIAGCV 258
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
Q+++ E LF M + + + +CA +++L + +LH + K+ D+
Sbjct: 259 QNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDII 318
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
V +D+Y KCG + A+K+ + M + S++++I+GYA+ G +ALK F + G
Sbjct: 319 VGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTG 378
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC--SCVVDLLARAGCVH 555
+ + +TL G L AC+ + EG ++ + I C + ++D+ + +
Sbjct: 379 LGFDEITLSGALNACASIRGDLEGRQVHGLAVKS---ISMSNICVANAILDMYGKCKALA 435
Query: 556 EAEDFINQMACDADIVVWKSLLAS 579
EA D + M D V W +++A+
Sbjct: 436 EASDLFDMME-RRDAVSWNAIIAA 458
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 71/170 (41%), Gaps = 33/170 (19%)
Query: 389 FSRMLASQIKPDHI--TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
FS + +Q +P TF+ + C+K SL Q H + G FV N LM +Y
Sbjct: 35 FSTLAQNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMY 94
Query: 447 IK-------------------------------CGSLGSARKLFNFMENPDVVSWSSLIL 475
IK CG + ARK F M DVVSW+S+I
Sbjct: 95 IKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVIS 154
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
G+ Q G +++ +F M GV + +L VL AC + + G+ ++
Sbjct: 155 GFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVH 204
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 203/586 (34%), Positives = 332/586 (56%), Gaps = 14/586 (2%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + L AL+A+ + ++ T++ ++ ACS ++ L++G++VH +++S
Sbjct: 129 ISGYAQNGLGGGALMAF-HEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSG 187
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ DV + N ++ MY KC D++ FD++P+RNVVSW A+ + Q +A+ L+
Sbjct: 188 FEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFY 247
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M+ SG+ P +F+ S++ AC+GL G+ +H ++IK + + NAL+ MY K
Sbjct: 248 EMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVG 307
Query: 186 RILDARNVFSGIARKDVTSWGSMIAA---FSKLGYELEALCHFNEMLHHGAYQPN--EFI 240
+ DA +VF I + D+ SW ++IA LE L LH + + +
Sbjct: 308 DLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDL 367
Query: 241 FGSV-----FSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
F SV +S C AR+ FN + DL +WNA+I+G + + EA+SLF EM
Sbjct: 368 FVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKE 427
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ + T+ ++L + G ++ QVH +K GF S++ V N+++ Y KCS + +A
Sbjct: 428 GIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDA 487
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
+F+E D VS+ S+I A Q+ Q EE +LF M ++KPD + ++ ACA
Sbjct: 488 ERIFEEC-TIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACAN 546
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+++ E QLH +I K G D+F N L+++Y KCGS+ A + F+ + +VSWS++
Sbjct: 547 LSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAM 606
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I G AQ G G +AL+LF +M GVSPN +TLV VL AC+H GLV E + ME +G
Sbjct: 607 IGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFG 666
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P +EH +C++DLL RAG ++EA + +N+M +A+ VW +LL +
Sbjct: 667 FKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGA 712
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 165/594 (27%), Positives = 300/594 (50%), Gaps = 75/594 (12%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
+ N +Y+ L+S C + +SL+ G ++H HI S D ++NH++N+Y KC
Sbjct: 48 DKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXF 107
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
AR D+ + ++VSW+A+I+G +QN A+ + +M GV +FTF S++KAC
Sbjct: 108 GYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKAC 167
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
S + + +G+Q+H V+ S + N L+ MY K D LD++ +F I ++V SW
Sbjct: 168 SIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWN 227
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------------- 250
++ + + + + EA+ F EM+ G +PNEF S+ +AC+
Sbjct: 228 ALFSCYVQXDFCGEAVGLFYEMVLSGI-KPNEFSLSSMVNACTGLRDSSRGKIIHGYLIK 286
Query: 251 ----------------FARI--------LFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
+A++ +F +I PD+ SWNA+IAG H + +A+ L
Sbjct: 287 LGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALEL 346
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
+M+ Q+HS ++KM +S++ V ++ MY+K
Sbjct: 347 LGQMK---------------------------RQLHSSLMKMDMESDLFVSVGLVDMYSK 379
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
C +L +A + F L + D ++WN+II+ Q+ + E LF M I + T +
Sbjct: 380 CDLLEDARMAFNLLPEK-DLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLST 438
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
++ + A + + + Q+H K+G D++V+N L+D Y KC + A ++F D
Sbjct: 439 ILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGD 498
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHL 524
+VS++S+I YAQ+G G+EALKLF M+ + + P+ +L AC+++ E+G LH+
Sbjct: 499 LVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHV 558
Query: 525 YRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ + +YG + + +V++ A+ G + +A +++ + IV W +++
Sbjct: 559 HIL---KYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT-ERGIVSWSAMIG 608
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 202/446 (45%), Gaps = 70/446 (15%)
Query: 114 NYQENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
+ E+ + ++ G P ++ ++ C S+ G Q+HAH+ KS
Sbjct: 33 QFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPS 92
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
+N LI +Y+K AR + + D+ SW ++I+ +++ G AL F+EM H
Sbjct: 93 IRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEM-HLL 151
Query: 233 AYQPNEFIFGSVFSACSNF----------------------------------------A 252
+ NEF F SV ACS +
Sbjct: 152 GVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDS 211
Query: 253 RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
+ LF+EI ++ SWNAL + EA+ LF EM + P+ ++ S++ AC G
Sbjct: 212 KRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGL 271
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
+G +H Y+IK+G+D + NA++ MYAK L +A+ VF+++ K D VSWN++
Sbjct: 272 RDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKI-KQPDIVSWNAV 330
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
IA C+ H E+ L +M QLH + K +
Sbjct: 331 IAGCVLHEHHEQALELLG---------------------------QMKRQLHSSLMKMDM 363
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
D+FV GL+D+Y KC L AR FN + D+++W+++I GY+Q+ EAL LF
Sbjct: 364 ESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVE 423
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLV 518
M G+ N TL +L + + + +V
Sbjct: 424 MHKEGIGFNQTTLSTILKSTAGLQVV 449
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 149/311 (47%), Gaps = 7/311 (2%)
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
LI V S + ++ + + P ++ LL C +L G+Q+H++I K G
Sbjct: 27 LIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
+ + N ++ +Y+KC A + E D VSW+++I+ Q+ F
Sbjct: 87 LSDDPSIRNHLINLYSKCRXFGYARKLVDE-SSEPDLVSWSALISGYAQNGLGGGALMAF 145
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
M +K + TF+ V+ AC+ + L + Q+H + +G DVFV N L+ +Y KC
Sbjct: 146 HEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKC 205
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
+++LF+ + +VVSW++L Y Q EA+ LF M G+ PN +L ++
Sbjct: 206 DEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMV 265
Query: 510 TACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
AC+ + G +H Y +++ Y P + +VD+ A+ G + +A ++
Sbjct: 266 NACTGLRDSSRGKIIHGY-LIKLGYDWDPFS--ANALVDMYAKVGDLADAISVFEKIK-Q 321
Query: 568 ADIVVWKSLLA 578
DIV W +++A
Sbjct: 322 PDIVSWNAVIA 332
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 195/584 (33%), Positives = 315/584 (53%), Gaps = 42/584 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T L+S+C S +L+ GR++H + ++ DV + N ILNMY KCGS+ +AR FDK
Sbjct: 245 ATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDK 304
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M ++VVSWT +I G + A +++ +M Q GV+P + T+ +++ A SG ++ G
Sbjct: 305 METKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWG 364
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ +H+H++ + H S L AL+ MY K D R VF + +D+ +W +MI ++
Sbjct: 365 KTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 424
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G EA +++M G PN+ + + +AC N
Sbjct: 425 GNWEEASEIYHQMQREG-MMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISV 483
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR+LFN++ D+ SW A+I G+A EA+++F +M+ L
Sbjct: 484 QNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGL 543
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ +T S+L AC L G ++H +I+ G ++ V N ++ MY+ C + +A
Sbjct: 544 KPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQ 603
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF + + D V++N++I HN +E +LF R+ +KPD +T+ +++ ACA
Sbjct: 604 VFDRMTQR-DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSG 662
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
SLE ++H + K G D + N L+ Y KCGS A +F+ M +V+SW+++I
Sbjct: 663 SLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIG 722
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
G AQ G G + L+LF RM+ G+ P++VT V +L+ACSH GL+EEG + M ++GI
Sbjct: 723 GCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGIT 782
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
PT EH C+VDLL RAG + E E I M A+ +W +LL +
Sbjct: 783 PTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGA 826
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 164/589 (27%), Positives = 301/589 (51%), Gaps = 46/589 (7%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
R+ Y ++ C ++ L GR+VH+HI+ D N ++NMY +CGS+E+AR
Sbjct: 138 RVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQ 197
Query: 92 GFDKM--PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
++K+ +R V SW AM+ G Q +A+KL +M Q G+ G+ T ++ +C
Sbjct: 198 VWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSP 257
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
++ GR++H +K+ + N ++ MY K I +AR VF + K V SW +I
Sbjct: 258 SALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIII 317
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA----------------- 252
++ G+ A F +M G PN + +V +A S A
Sbjct: 318 GGYADCGHSEIAFEIFQKMQQEGVV-PNRITYINVLNAFSGPAALKWGKTVHSHILNAGH 376
Query: 253 -----------------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
R +F ++ + DL +WN +I G+A N EA ++ +
Sbjct: 377 ESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQ 436
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M+ ++P+ +T LL AC+ L+ G ++HS ++K GF ++ V NA+++MYA+C
Sbjct: 437 MQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGS 496
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ +A L+F ++ + D +SW ++I + E +F M + +KP+ +T+ ++
Sbjct: 497 IKDARLLFNKMVRK-DIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILN 555
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
AC+ A+L+ ++H + + GLA D V N L+++Y CGS+ AR++F+ M D+V+
Sbjct: 556 ACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVA 615
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
++++I GYA G EALKLF R++ G+ P+ VT + +L AC++ G +E ++ ++
Sbjct: 616 YNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVL 675
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ G + + +V A+ G +A ++M +++ W +++
Sbjct: 676 KD-GYLSDTSLGNALVSTYAKCGSFSDALLVFDKM-MKRNVISWNAIIG 722
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 148/499 (29%), Positives = 259/499 (51%), Gaps = 46/499 (9%)
Query: 20 VAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHIL 77
+A++ Q + P+ TY +++A S +L+ G+ VH HIL + + D+ + ++
Sbjct: 328 IAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALV 387
Query: 78 NMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQF 137
MY KCGS +D R F+K+ R++++W MI G ++ +A ++Y QM + G+MP +
Sbjct: 388 KMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKI 447
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
T+ ++ AC ++ GR++H+ V+K + QNALI+MY + I DAR +F+ +
Sbjct: 448 TYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKM 507
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------ 251
RKD+ SW +MI +K G EAL F +M G +PN + S+ +ACS+
Sbjct: 508 VRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAG-LKPNRVTYTSILNACSSPAALDWG 566
Query: 252 ----------------------------------ARILFNEIDSPDLASWNALIAGVASH 277
AR +F+ + D+ ++NA+I G A+H
Sbjct: 567 RRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAH 626
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
+ EA+ LF +++ L PD +T ++L AC +L ++HS ++K G+ S+ +
Sbjct: 627 NLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLG 686
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
NA+++ YAKC +ALLVF ++ K + +SWN+II C QH + +++ +LF RM I
Sbjct: 687 NALVSTYAKCGSFSDALLVFDKMMKR-NVISWNAIIGGCAQHGRGQDVLQLFERMKMEGI 745
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSAR 456
KPD +TF ++ AC+ LE + C +++ G+ + ++D+ + G L
Sbjct: 746 KPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVE 805
Query: 457 KLFNFME-NPDVVSWSSLI 474
L M + W +L+
Sbjct: 806 ALIKTMPFQANTRIWGALL 824
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 242/496 (48%), Gaps = 46/496 (9%)
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
Y+Q Q G + ++K C + + GR++H H+I+ NALI MY +
Sbjct: 131 YLQ--QQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQ 188
Query: 184 FDRILDARNVFSGI--ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG--------- 232
I +AR V++ + + V SW +M+ + + GY EAL EM HG
Sbjct: 189 CGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTM 248
Query: 233 -----AYQPNEFIFG-----------------------SVFSACSNF--ARILFNEIDSP 262
P+ G ++++ C + AR +F+++++
Sbjct: 249 RLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETK 308
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+ SW +I G A ++ A +F +M+ ++P+ +T ++L A G L G VH
Sbjct: 309 SVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVH 368
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
S+I+ G +S++ V A++ MYAKC + VF++L N D ++WN++I +
Sbjct: 369 SHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMIGGLAEGGNW 427
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
EE ++ +M + P+ IT+ ++ AC +L ++H + K G FD+ V N L
Sbjct: 428 EEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNAL 487
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+ +Y +CGS+ AR LFN M D++SW+++I G A+ G G EAL +F M+ G+ PN
Sbjct: 488 ISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNR 547
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
VT +L ACS ++ G +++ + E G+ + +V++ + G V +A +
Sbjct: 548 VTYTSILNACSSPAALDWGRRIHQQV-IEAGLATDAHVANTLVNMYSMCGSVKDARQVFD 606
Query: 563 QMACDADIVVWKSLLA 578
+M DIV + +++
Sbjct: 607 RMT-QRDIVAYNAMIG 621
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 205/616 (33%), Positives = 326/616 (52%), Gaps = 43/616 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS C++ ++ E++ + + +T+A L+ +CS+L L LG +VH +
Sbjct: 118 NALVSGYCQRGMFQESVDLF-VEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAV 176
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + DV + +++MYGKC SL+DA F MP+RN VSW A IAGC QN Q ++
Sbjct: 177 KTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLE 236
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+I+M + G+ Q ++ S ++C+ + + GRQLHAH IK++ S + A++ +Y
Sbjct: 237 LFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYA 296
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + + DAR F G+ V + +M+ + G +EA+ F M+ + + +
Sbjct: 297 KANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIR-SSIRFDVVSLS 355
Query: 243 SVFSAC------------------SNF----------------------ARILFNEIDSP 262
VFSAC S F A ++F +
Sbjct: 356 GVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQK 415
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D SWNA+IA + + + ++ + F+EM + PD T S+L AC +L G+ VH
Sbjct: 416 DSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVH 475
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+IK G S+ V + ++ MY KC ++ A + +G VSWN+I++ + ++
Sbjct: 476 DKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG-GQQVVSWNAILSGFSLNKES 534
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
EE + FS ML +KPDH TF V+ CA +A++E+ Q+H I K + D ++ + L
Sbjct: 535 EEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTL 594
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y KCG + + +F +E D VSW+++I GYA G G EAL++F RM+ V PN
Sbjct: 595 VDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNH 654
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
T V VL ACSHVGL ++G + +M Y + P EH +C+VD+L R+ EA FIN
Sbjct: 655 ATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFIN 714
Query: 563 QMACDADIVVWKSLLA 578
M AD V+WK+LL+
Sbjct: 715 SMPFQADAVIWKTLLS 730
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 165/552 (29%), Positives = 273/552 (49%), Gaps = 50/552 (9%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D V N +L Y G + A FD MP +VVSW A+++G Q +++ L+++M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
+ GV P + TF ++K+CS L + LG Q+HA +K+ + +AL+ MY K +
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM--LHHGAYQPNEFIFGSVFS 246
DA F G+ ++ SWG+ IA + + L F EM L G QP+ + S F
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS---YASAFR 258
Query: 247 ACSNF----------------------------------------ARILFNEIDSPDLAS 266
+C+ AR F + + + +
Sbjct: 259 SCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVET 318
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
NA++ G+ EAM LF M + D +++ + AC +QG QVH I
Sbjct: 319 SNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAI 378
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
K GFD ++ V NA+L +Y KC L A L+F+ + K DSVSWN+IIAA Q+ ++
Sbjct: 379 KSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGM-KQKDSVSWNAIIAALEQNGHYDDTI 437
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
F+ ML +KPD T+ V+ ACA + SLE +H + K+GL D FV + ++D+Y
Sbjct: 438 LHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMY 497
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KCG + A+KL + + VVSW++++ G++ +EA K F+ M +G+ P+ T
Sbjct: 498 CKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFA 557
Query: 507 GVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
VL C+++ +E G ++ +I++ E ++ S +VD+ A+ G + ++ + +
Sbjct: 558 TVLDTCANLATIELGKQIHGQIIKQE--MLDDEYISSTLVDMYAKCGDMPDSL-LVFEKV 614
Query: 566 CDADIVVWKSLL 577
D V W +++
Sbjct: 615 EKRDFVSWNAMI 626
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 212/459 (46%), Gaps = 42/459 (9%)
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGS--VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
Q V P + TF + ++C+ G + GR HA ++ S N L+ MY +
Sbjct: 5 QQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYAR 64
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
AR VF + R+D SW +M+ A+S G
Sbjct: 65 CAGAACARRVFDAMPRRDTVSWNTMLTAYSHAG--------------------------D 98
Query: 244 VFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
+ +A + LF+ + PD+ SWNAL++G E++ LF EM R + PD T
Sbjct: 99 ISTAVA-----LFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFA 153
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
LL +C L G+QVH+ +K G + +V +A++ MY KC L +AL F + +
Sbjct: 154 VLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPER 213
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
+ VSW + IA C+Q+ Q LF M + ++ +CA M+ L QL
Sbjct: 214 -NWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQL 272
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H + K + D V ++D+Y K SL AR+ F + N V + +++++G + G G
Sbjct: 273 HAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLG 332
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI-MENEYGIIPTREHC- 541
EA+ LF M + ++V+L GV +AC+ +G ++ + +++ + + + C
Sbjct: 333 IEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDV----DICV 388
Query: 542 -SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ V+DL + + EA I Q D V W +++A+
Sbjct: 389 NNAVLDLYGKCKALMEAY-LIFQGMKQKDSVSWNAIIAA 426
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 205/616 (33%), Positives = 326/616 (52%), Gaps = 43/616 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS C++ ++ E++ + + +T+A L+ +CS+L L LG +VH +
Sbjct: 118 NALVSGYCQRGMFQESVDLF-VEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAV 176
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + DV + +++MYGKC SL+DA F MP+RN VSW A IAGC QN Q ++
Sbjct: 177 KTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLE 236
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+I+M + G+ Q ++ S ++C+ + + GRQLHAH IK++ S + A++ +Y
Sbjct: 237 LFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYA 296
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + + DAR F G+ V + +M+ + G +EA+ F M+ + + +
Sbjct: 297 KANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIR-SSIRFDVVSLS 355
Query: 243 SVFSAC------------------SNF----------------------ARILFNEIDSP 262
VFSAC S F A ++F +
Sbjct: 356 GVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQK 415
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D SWNA+IA + + + ++ + F+EM + PD T S+L AC +L G+ VH
Sbjct: 416 DSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVH 475
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+IK G S+ V + ++ MY KC ++ A + +G VSWN+I++ + ++
Sbjct: 476 DKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG-GQQVVSWNAILSGFSLNKES 534
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
EE + FS ML +KPDH TF V+ CA +A++E+ Q+H I K + D ++ + L
Sbjct: 535 EEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTL 594
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y KCG + + +F +E D VSW+++I GYA G G EAL++F RM+ V PN
Sbjct: 595 VDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNH 654
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
T V VL ACSHVGL ++G + +M Y + P EH +C+VD+L R+ EA FIN
Sbjct: 655 ATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFIN 714
Query: 563 QMACDADIVVWKSLLA 578
M AD V+WK+LL+
Sbjct: 715 SMPFQADAVIWKTLLS 730
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 165/552 (29%), Positives = 273/552 (49%), Gaps = 50/552 (9%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D V N +L Y G + A FD MP +VVSW A+++G Q +++ L+++M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
+ GV P + TF ++K+CS L + LG Q+HA +K+ + +AL+ MY K +
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM--LHHGAYQPNEFIFGSVFS 246
DA F G+ ++ SWG+ IA + + L F EM L G QP+ + S F
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS---YASAFR 258
Query: 247 ACSNF----------------------------------------ARILFNEIDSPDLAS 266
+C+ AR F + + + +
Sbjct: 259 SCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVET 318
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
NA++ G+ EAM LF M + D +++ + AC +QG QVH I
Sbjct: 319 SNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAI 378
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
K GFD ++ V NA+L +Y KC L A L+F+ + K DSVSWN+IIAA Q+ ++
Sbjct: 379 KSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGM-KQKDSVSWNAIIAALEQNGHYDDTI 437
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
F+ ML +KPD T+ V+ ACA + SLE +H + K+GL D FV + ++D+Y
Sbjct: 438 LHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMY 497
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KCG + A+KL + + VVSW++++ G++ +EA K F+ M +G+ P+ T
Sbjct: 498 CKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFA 557
Query: 507 GVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
VL C+++ +E G ++ +I++ E ++ S +VD+ A+ G + ++ + +
Sbjct: 558 TVLDTCANLATIELGKQIHGQIIKQE--MLDDEYISSTLVDMYAKCGDMPDSL-LVFEKV 614
Query: 566 CDADIVVWKSLL 577
D V W +++
Sbjct: 615 EKRDFVSWNAMI 626
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 213/459 (46%), Gaps = 42/459 (9%)
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGS--VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
Q V P + TF + ++C+ G + GR HA ++ S + N L+ MY +
Sbjct: 5 QQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYAR 64
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
AR VF + R+D SW +M+ A+S G
Sbjct: 65 CAGAACARRVFDAMPRRDTVSWNTMLTAYSHAG--------------------------D 98
Query: 244 VFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
+ +A + LF+ + PD+ SWNAL++G E++ LF EM R + PD T
Sbjct: 99 ISTAVA-----LFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFA 153
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
LL +C L G+QVH+ +K G + +V +A++ MY KC L +AL F + +
Sbjct: 154 VLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPER 213
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
+ VSW + IA C+Q+ Q LF M + ++ +CA M+ L QL
Sbjct: 214 -NWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQL 272
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H + K + D V ++D+Y K SL AR+ F + N V + +++++G + G G
Sbjct: 273 HAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLG 332
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI-MENEYGIIPTREHC- 541
EA+ LF M + ++V+L GV +AC+ +G ++ + +++ + + + C
Sbjct: 333 IEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDV----DICV 388
Query: 542 -SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ V+DL + + EA I Q D V W +++A+
Sbjct: 389 NNAVLDLYGKCKALMEAY-LIFQGMKQKDSVSWNAIIAA 426
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 205/616 (33%), Positives = 326/616 (52%), Gaps = 43/616 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS C++ ++ E++ + + +T+A L+ +CS+L L LG +VH +
Sbjct: 160 NALVSGYCQRGMFQESVDLF-VEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAV 218
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + DV + +++MYGKC SL+DA F MP+RN VSW A IAGC QN Q ++
Sbjct: 219 KTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLE 278
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+I+M + G+ Q ++ S ++C+ + + GRQLHAH IK++ S + A++ +Y
Sbjct: 279 LFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYA 338
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + + DAR F G+ V + +M+ + G +EA+ F M+ + + +
Sbjct: 339 KANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIR-SSIRFDVVSLS 397
Query: 243 SVFSAC------------------SNF----------------------ARILFNEIDSP 262
VFSAC S F A ++F +
Sbjct: 398 GVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQK 457
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D SWNA+IA + + + ++ + F+EM + PD T S+L AC +L G+ VH
Sbjct: 458 DSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVH 517
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+IK G S+ V + ++ MY KC ++ A + +G VSWN+I++ + ++
Sbjct: 518 DKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG-GQQVVSWNAILSGFSLNKES 576
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
EE + FS ML +KPDH TF V+ CA +A++E+ Q+H I K + D ++ + L
Sbjct: 577 EEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTL 636
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y KCG + + +F +E D VSW+++I GYA G G EAL++F RM+ V PN
Sbjct: 637 VDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNH 696
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
T V VL ACSHVGL ++G + +M Y + P EH +C+VD+L R+ EA FIN
Sbjct: 697 ATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFIN 756
Query: 563 QMACDADIVVWKSLLA 578
M AD V+WK+LL+
Sbjct: 757 SMPFQADAVIWKTLLS 772
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 165/552 (29%), Positives = 273/552 (49%), Gaps = 50/552 (9%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D V N +L Y G + A FD MP +VVSW A+++G Q +++ L+++M
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 183
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
+ GV P + TF ++K+CS L + LG Q+HA +K+ + +AL+ MY K +
Sbjct: 184 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 243
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM--LHHGAYQPNEFIFGSVFS 246
DA F G+ ++ SWG+ IA + + L F EM L G QP+ + S F
Sbjct: 244 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS---YASAFR 300
Query: 247 ACSNF----------------------------------------ARILFNEIDSPDLAS 266
+C+ AR F + + + +
Sbjct: 301 SCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVET 360
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
NA++ G+ EAM LF M + D +++ + AC +QG QVH I
Sbjct: 361 SNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAI 420
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
K GFD ++ V NA+L +Y KC L A L+F+ + K DSVSWN+IIAA Q+ ++
Sbjct: 421 KSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGM-KQKDSVSWNAIIAALEQNGHYDDTI 479
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
F+ ML +KPD T+ V+ ACA + SLE +H + K+GL D FV + ++D+Y
Sbjct: 480 LHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMY 539
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KCG + A+KL + + VVSW++++ G++ +EA K F+ M +G+ P+ T
Sbjct: 540 CKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFA 599
Query: 507 GVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
VL C+++ +E G ++ +I++ E ++ S +VD+ A+ G + ++ + +
Sbjct: 600 TVLDTCANLATIELGKQIHGQIIKQE--MLDDEYISSTLVDMYAKCGDMPDSL-LVFEKV 656
Query: 566 CDADIVVWKSLL 577
D V W +++
Sbjct: 657 EKRDFVSWNAMI 668
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 212/459 (46%), Gaps = 42/459 (9%)
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGS--VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
Q V P + TF + ++C+ G + GR HA ++ S N L+ MY +
Sbjct: 47 QQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYAR 106
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
AR VF + R+D SW +M+ A+S G
Sbjct: 107 CAGAACARRVFDAMPRRDTVSWNTMLTAYSHAG--------------------------D 140
Query: 244 VFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
+ +A + LF+ + PD+ SWNAL++G E++ LF EM R + PD T
Sbjct: 141 ISTAVA-----LFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFA 195
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
LL +C L G+QVH+ +K G + +V +A++ MY KC L +AL F + +
Sbjct: 196 VLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPER 255
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
+ VSW + IA C+Q+ Q LF M + ++ +CA M+ L QL
Sbjct: 256 -NWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQL 314
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H + K + D V ++D+Y K SL AR+ F + N V + +++++G + G G
Sbjct: 315 HAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLG 374
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI-MENEYGIIPTREHC- 541
EA+ LF M + ++V+L GV +AC+ +G ++ + +++ + + + C
Sbjct: 375 IEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDV----DICV 430
Query: 542 -SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ V+DL + + EA I Q D V W +++A+
Sbjct: 431 NNAVLDLYGKCKALMEAY-LIFQGMKQKDSVSWNAIIAA 468
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 390 SRMLASQ-----IKPDHITFNDVMGACAKMASLEMVTQLHCYITK---TGLAFDVFVMNG 441
+RM A Q + P +TF+ V +CA+ A E + + +G FV N
Sbjct: 41 ARMPAEQQQPPPVAPARVTFSRVFQSCAQ-AGREALAAGRAAHARMVVSGFVPTAFVSNC 99
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+ +Y +C AR++F+ M D VSW++++ Y+ G A+ LF M P+
Sbjct: 100 LLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMP----DPD 155
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
+V+ +++ G+ +E + L+ M G+ P R
Sbjct: 156 VVSWNALVSGYCQRGMFQESVDLFVEMARR-GVSPDR 191
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 203/614 (33%), Positives = 332/614 (54%), Gaps = 43/614 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + L AL+A+ + ++ T++ ++ ACS ++ L++G++VH +++S
Sbjct: 129 ISGYAQNGLGGGALMAF-HEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSG 187
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ DV + N ++ MY KC D++ FD++P+RNVVSW A+ + Q +A+ L+
Sbjct: 188 FEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFY 247
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M+ SG+ P +F+ S++ AC+GL G+ +H ++IK + + NAL+ MY K
Sbjct: 248 EMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVG 307
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ DA +VF I + D+ SW ++IA + +AL +M G PN F S
Sbjct: 308 DLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGIC-PNIFTLSSAL 366
Query: 246 SACSNF----------------------------------------ARILFNEIDSPDLA 265
AC+ AR+ FN + DL
Sbjct: 367 KACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLI 426
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
+WNA+I+G + + EA+SLF EM + + T+ ++L + G ++ QVH
Sbjct: 427 AWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLS 486
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
+K GF S++ V N+++ Y KCS + +A +F+E D VS+ S+I A Q+ Q EE
Sbjct: 487 VKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEEC-TIGDLVSFTSMITAYAQYGQGEEA 545
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
+LF M ++KPD + ++ ACA +++ E QLH +I K G D+F N L+++
Sbjct: 546 LKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNM 605
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y KCGS+ A + F+ + +VSWS++I G AQ G G +AL+LF +M GVSPN +TL
Sbjct: 606 YAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITL 665
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
V VL AC+H GLV E + ME +G P +EH +C++DLL RAG ++EA + +N+M
Sbjct: 666 VSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMP 725
Query: 566 CDADIVVWKSLLAS 579
+A+ VW +LL +
Sbjct: 726 FEANASVWGALLGA 739
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 173/594 (29%), Positives = 313/594 (52%), Gaps = 48/594 (8%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
+ N +Y+ L+S C + +SL+ G ++H HI S D ++NH++N+Y KC +
Sbjct: 48 DKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNF 107
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
AR D+ + ++VSW+A+I+G +QN A+ + +M GV +FTF S++KAC
Sbjct: 108 GYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKAC 167
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
S + + +G+Q+H V+ S + N L+ MY K D LD++ +F I ++V SW
Sbjct: 168 SIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWN 227
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------------- 250
++ + + ++ + EA+ F EM+ G +PNEF S+ +AC+
Sbjct: 228 ALFSCYVQIDFCGEAVGLFYEMVLSG-IKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIK 286
Query: 251 ----------------FARI--------LFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
+A++ +F +I PD+ SWNA+IAG H + +A+ L
Sbjct: 287 LGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALEL 346
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
+M+ + P+ T+ S L AC G G Q+HS ++KM +S++ V ++ MY+K
Sbjct: 347 LGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSK 406
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
C +L +A + F L + D ++WN+II+ Q+ + E LF M I + T +
Sbjct: 407 CDLLEDARMAFNLLPEK-DLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLST 465
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
++ + A + + + Q+H K+G D++V+N L+D Y KC + A ++F D
Sbjct: 466 ILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGD 525
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHL 524
+VS++S+I YAQ+G G+EALKLF M+ + + P+ +L AC+++ E+G LH+
Sbjct: 526 LVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHV 585
Query: 525 YRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ + +YG + + +V++ A+ G + +A +++ + IV W +++
Sbjct: 586 HIL---KYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT-ERGIVSWSAMIG 635
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 149/311 (47%), Gaps = 7/311 (2%)
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
LI V S + ++ + + P ++ LL C +L G+Q+H++I K G
Sbjct: 27 LIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
+ + N ++ +Y+KC A + E D VSW+++I+ Q+ F
Sbjct: 87 LSDDPSIRNHLINLYSKCRNFGYARKLVDE-SSEPDLVSWSALISGYAQNGLGGGALMAF 145
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
M +K + TF+ V+ AC+ + L + Q+H + +G DVFV N L+ +Y KC
Sbjct: 146 HEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKC 205
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
+++LF+ + +VVSW++L Y Q EA+ LF M G+ PN +L ++
Sbjct: 206 DEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMV 265
Query: 510 TACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
AC+ + G +H Y +++ Y P + +VD+ A+ G + +A ++
Sbjct: 266 NACTGLRDSSRGKIIHGY-LIKLGYDWDPFS--ANALVDMYAKVGDLADAISVFEKIK-Q 321
Query: 568 ADIVVWKSLLA 578
DIV W +++A
Sbjct: 322 PDIVSWNAVIA 332
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 287/522 (54%), Gaps = 42/522 (8%)
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+ N V W I G +N N A++LY QM ++G+ P + F S+IKAC + GR+
Sbjct: 82 RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRK 141
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H +I S +I AL +MYTK + +AR VF + ++DV SW ++IA +S+ G
Sbjct: 142 VHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQ 201
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------------------- 249
EAL F+EM +G +PN SV C+
Sbjct: 202 PYEALALFSEMQVNG-IKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVN 260
Query: 250 ------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
N A LF + D+ASWNA+I G + +S +EA++ F+ M+ R + P
Sbjct: 261 GLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKP 320
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+ +T+ S+L AC L QG Q+H Y I+ GF+SN V NA++ MYAKC + +A +F
Sbjct: 321 NSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLF 380
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+ + K + V+WN+II+ QH E LF M A IKPD V+ ACA +L
Sbjct: 381 ERMPKK-NVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLAL 439
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
E Q+H Y ++G +V V GL+DIY KCG++ +A+KLF M DVVSW+++IL Y
Sbjct: 440 EQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAY 499
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
G G++AL LF++M+ G + + +LTACSH GLV++GL ++ M+++YG+ P
Sbjct: 500 GIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPK 559
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH +C+VDLL RAG + EA I M+ + D VW +LL +
Sbjct: 560 LEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGA 601
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 171/524 (32%), Positives = 262/524 (50%), Gaps = 50/524 (9%)
Query: 11 KQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
K +N+AL Y + T I + +I AC S LQ GRKVH+ I+ + DV
Sbjct: 97 KNGFWNKALRLY-YQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDV 155
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
++ + +MY KCGSLE+AR FD+MP+R+VVSW A+IAG SQN Q +A+ L+ +M +
Sbjct: 156 IVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVN 215
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G+ P T S++ C+ L ++ G+Q+H + I+S S ++ N L+ MY K + A
Sbjct: 216 GIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTA 275
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS- 249
+F + +DV SW ++I +S EAL FN M G +PN SV AC+
Sbjct: 276 HKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRG-IKPNSITMVSVLPACAH 334
Query: 250 ---------------------------------------NFARILFNEIDSPDLASWNAL 270
N A LF + ++ +WNA+
Sbjct: 335 LFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAI 394
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I+G + H + +EA++LF EM+ + + PD + S+L AC L L QG Q+H Y I+ GF
Sbjct: 395 ISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGF 454
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+SNV V ++ +YAKC + A +F+ + + D VSW ++I A H E+ LFS
Sbjct: 455 ESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQ-DVVSWTTMILAYGIHGHGEDALALFS 513
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQ-LHCYITKTGLAFDVFVMNGLMDIYIKC 449
+M + K DHI F ++ AC+ ++ Q C + GLA + L+D+ +
Sbjct: 514 KMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRA 573
Query: 450 GSLGSARKLFNFME-NPDVVSWSSLILGYAQFGC----GDEALK 488
G L A + M PD W +L LG + C G++A K
Sbjct: 574 GHLDEANGIIKNMSLEPDANVWGAL-LGACRIHCNIELGEQAAK 616
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 175/331 (52%), Gaps = 21/331 (6%)
Query: 15 YNEALVAYDFSQNNTNIR-IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
++EAL + N +R I+P+ T ++ AC+ L +L+ G+++H + + S + + V
Sbjct: 303 HHEALAFF----NRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDV 358
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ N ++NMY KCG++ A F++MP++NVV+W A+I+G SQ+ ++A+ L+I+M G
Sbjct: 359 VGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQG 418
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
+ P F S++ AC+ ++ G+Q+H + I+S S+++ L+ +Y K + A+
Sbjct: 419 IKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQ 478
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF 251
+F + +DV SW +MI A+ G+ +AL F++M G + + F ++ +ACS+
Sbjct: 479 KLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGT-KLDHIAFTAILTACSHA 537
Query: 252 ARI-----LFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
+ F + S P L + L+ + + +EA + M L PD
Sbjct: 538 GLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNM---SLEPDANV 594
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
+LL AC + G Q ++ ++ D+
Sbjct: 595 WGALLGACRIHCNIELGEQAAKHLFELDPDN 625
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 198/617 (32%), Positives = 321/617 (52%), Gaps = 43/617 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +++L + EA Y + + + + +TY +++ACS+ ++L+ G+ +H HI
Sbjct: 299 NALIAALAQHGHNVEAFEQY-YRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHIS 357
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
DV + N +++MY +CG L AR F MP+R+++SW A+IAG ++ +A++
Sbjct: 358 EDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMR 417
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
LY QM GV PG+ TF ++ AC+ + G+ +H +++S S+ NAL+ MY
Sbjct: 418 LYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYR 477
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
+ +++A+NVF G +DV SW SMIA ++ G A F EM + +P+ F
Sbjct: 478 RCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEM-QNEELEPDNITFA 536
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
SV S C N AR +F+ +
Sbjct: 537 SVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR 596
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ SW A+I G A +A+ LF +M++ P T S+L C L +G +V
Sbjct: 597 DVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVI 656
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+YI+ G++ + V NA+++ Y+K + +A VF ++ + D VSWN IIA Q+
Sbjct: 657 AYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKM-PSRDIVSWNKIIAGYAQNGLG 715
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
+ +M + P+ +F ++ AC+ ++LE ++H I K L DV V L
Sbjct: 716 QTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAAL 775
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+ +Y KCGS G A+++F+ + +VV+W+++I YAQ G +AL F M G+ P+
Sbjct: 776 ISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDG 835
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
T +L+AC+H GLV EG ++ ME+EYG++PT EH C+V LL RA EAE IN
Sbjct: 836 STFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLIN 895
Query: 563 QMACDADIVVWKSLLAS 579
QM D VW++LL +
Sbjct: 896 QMPFPPDAAVWETLLGA 912
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 165/584 (28%), Positives = 300/584 (51%), Gaps = 46/584 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+TY L+ C+ R L +++H ++ + PD+ L N ++NMY KC S+ DA F +
Sbjct: 28 ATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP+R+V+SW ++I+ +Q + A +L+ +M +G +P + T+ SI+ AC + G
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+++H+ +IK+ + QN+L++MY K + AR VF+GI+ +DV S+ +M+ +++
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQK 207
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------------- 249
Y E L F +M G P++ + ++ A +
Sbjct: 208 AYVKECLGLFGQMSSEG-ISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRV 266
Query: 250 --------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+ A+ F D+ +NALIA +A H + EA + MR +
Sbjct: 267 GTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGV 326
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
+ T S+L AC L G +HS+I + G S+V + NA+++MYA+C L A
Sbjct: 327 ALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARE 386
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F + K D +SWN+IIA + E RL+ +M + +KP +TF ++ ACA +
Sbjct: 387 LFYTMPKR-DLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSS 445
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+ +H I ++G+ + + N LM++Y +CGSL A+ +F + DV+SW+S+I
Sbjct: 446 AYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIA 505
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGI 534
G+AQ G + A KLF M++ + P+ +T VL+ C + +E G ++ RI E+ G+
Sbjct: 506 GHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES--GL 563
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++++ R G + +A + + + D++ W +++
Sbjct: 564 QLDVNLGNALINMYIRCGSLQDARNVFHSLQ-HRDVMSWTAMIG 606
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 149/312 (47%), Gaps = 50/312 (16%)
Query: 24 FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
+ N R ST++ ++ C+S L G+KV +IL S + D + N +++ Y K
Sbjct: 622 WQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKS 681
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
GS+ DAR FDKMP R++VSW +IAG +QN A++ QM + V+P +F+F S++
Sbjct: 682 GSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLL 741
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
ACS ++ G+++HA ++K + + ALI+MY K +A+ VF I K+V
Sbjct: 742 NACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVV 801
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL-------- 255
+W +MI A+++ G +AL FN M G +P+ F S+ SAC++ +L
Sbjct: 802 TWNAMINAYAQHGLASKALGFFNCMEKEG-IKPDGSTFTSILSACNHAGLVLEGYQIFSS 860
Query: 256 --------------------------FNEIDS--------PDLASWNALIAGVASHSN-- 279
F E ++ PD A W L+ H N
Sbjct: 861 MESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIA 920
Query: 280 -----ANEAMSL 286
AN A+ L
Sbjct: 921 LAEHAANNALKL 932
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 3/133 (2%)
Query: 396 QIKP---DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
Q +P + T+ ++ C + L ++H + + + D+F+ N L+++Y+KC S+
Sbjct: 19 QPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSV 78
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
A ++F M DV+SW+SLI YAQ G +A +LF M++ G PN +T + +LTAC
Sbjct: 79 LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTAC 138
Query: 513 SHVGLVEEGLHLY 525
+E G ++
Sbjct: 139 YSPAELENGKKIH 151
>gi|297741566|emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 195/400 (48%), Positives = 257/400 (64%), Gaps = 32/400 (8%)
Query: 197 IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----- 251
+ ++V SW S+IA +S+ G AL + +ML G P++F FGS+ ACS+
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGV-MPDQFTFGSIIKACSSLGDIGL 59
Query: 252 -----ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV---- 302
A +L +E + +A NALI+ + +A+ +FS M R+L+ G +
Sbjct: 60 GRQLHAHVLKSEFGAHIIAQ-NALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFS 118
Query: 303 ---HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+ L C + L+QG ++ NAI+ +A L +A+ F+E
Sbjct: 119 QLGYELEALCYFKEMLHQGR------------PDLVAWNAIIAGFAYGE-LRDAIFFFEE 165
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
+ NAD VSWN+I+ AC++H+QAEE+FRL M SQ +PD+IT +V+GA A+ S+E+
Sbjct: 166 MRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEI 225
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
Q+HCY KTGL D V NGL+D+Y KCGSL +A K+F+ M NPDVVSWSSLILGYAQ
Sbjct: 226 GNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQ 285
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTRE 539
FG G+EALKLF MR L V PN VT VGVLTACSHVGLVEEG LY ME E+GI PTRE
Sbjct: 286 FGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTRE 345
Query: 540 HCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
HCSC+VDLLARAGC++EAE FI+QMA D DIVVWK+LLA+
Sbjct: 346 HCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAA 385
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/387 (44%), Positives = 239/387 (61%), Gaps = 12/387 (3%)
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP+RNVVSWT++IAG SQN Q +A++ Y QMLQSGVMP QFTFGSIIKACS LG + LG
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 60
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
RQLHAHV+KSE G+H+IAQNALI+MYTK + I+DA +VFS +A +D+ SWGSMIA FS+L
Sbjct: 61 RQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQL 120
Query: 216 GYELEALCHFNEMLHHGAYQP-----NEFIFGSVFSACSNFARILFNEID-SPDLASWNA 269
GYELEALC+F EMLH G +P N I G + + A F E+ + DL SWNA
Sbjct: 121 GYELEALCYFKEMLHQG--RPDLVAWNAIIAGFAYGELRD-AIFFFEEMRCNADLVSWNA 177
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
++ H A E L M + PD +T+ ++L A +++ G QVH Y +K G
Sbjct: 178 ILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTG 237
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
+ + V N ++ +YAKC L A +F + N D VSW+S+I Q EE +LF
Sbjct: 238 LNCDTSVTNGLIDLYAKCGSLKTAHKIFDSM-INPDVVSWSSLILGYAQFGYGEEALKLF 296
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIK 448
M +KP+H+TF V+ AC+ + +E +L+ + K G+A + ++D+ +
Sbjct: 297 KTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLAR 356
Query: 449 CGSLGSARKLFNFME-NPDVVSWSSLI 474
G L A + M +PD+V W +L+
Sbjct: 357 AGCLNEAEGFIHQMAFDPDIVVWKTLL 383
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 170/363 (46%), Gaps = 28/363 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +I ACSSL + LGR++H H+L S+ ++ QN +++MY K + DA F +M
Sbjct: 43 TFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRM 102
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+++SW +MIAG SQ E +A+ + +ML G P + +II G
Sbjct: 103 ATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQG-RPDLVAWNAII------AGFAYGE 155
Query: 157 QLHAHVIKSEH--GSHLIAQNALIAMYTKFDRILDARNVFSGIA-------RKDVTSWGS 207
A E + L++ NA++ + D+ A VF + R D + +
Sbjct: 156 LRDAIFFFEEMRCNADLVSWNAILTACMRHDQ---AEEVFRLLKLMCISQHRPDYITLTN 212
Query: 208 MIAAFSK-LGYELEALCH---FNEMLHHGAYQPNEFIFGSVFSACSNF--ARILFNEIDS 261
++ A ++ + E+ H L+ N I +++ C + A +F+ + +
Sbjct: 213 VLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLI--DLYAKCGSLKTAHKIFDSMIN 270
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
PD+ SW++LI G A EA+ LF MR ++ P+ +T +L AC + +G ++
Sbjct: 271 PDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKL 330
Query: 322 HSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+ + K G C+ ++ + A+ L A ++ + D V W +++AAC H
Sbjct: 331 YGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHG 390
Query: 381 QAE 383
+
Sbjct: 391 NVD 393
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP T ++ A + S+++G +VH + L + D + N ++++Y KCGSL+ A
Sbjct: 204 RPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHK 263
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD M +VVSW+++I G +Q +A+KL+ M + V P TF ++ ACS +G
Sbjct: 264 IFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGL 323
Query: 152 VCLGRQLHAHVIKS 165
V G +L+ + K
Sbjct: 324 VEEGWKLYGTMEKE 337
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 200/584 (34%), Positives = 313/584 (53%), Gaps = 42/584 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T+A ++ ACS + LG +VH + + DVV + +++MY KC L+DA F +
Sbjct: 139 ATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFRE 198
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP+RN+V W+A+IAG QN + + +KL+ ML+ G+ Q T+ S+ ++C+GL + LG
Sbjct: 199 MPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLG 258
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
QLH H +KS+ I A + MY K +R+ DA VF+ + S+ ++I +++
Sbjct: 259 TQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQ 318
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR---------------------- 253
L+AL F + L +E +ACS R
Sbjct: 319 DQGLKALDIF-QSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICV 377
Query: 254 ------------------ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
++F E++ D SWNA+IA + + +SLF M +
Sbjct: 378 ANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTM 437
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD T S++ AC G+ L G ++H IIK G + V +A++ MY KC +L A
Sbjct: 438 EPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEK 497
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+ L + +VSWNSII+ Q+E R FS+ML I PD+ T+ V+ CA MA
Sbjct: 498 IHARL-EEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMA 556
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
++E+ Q+H I K L DV++ + L+D+Y KCG++ +R +F D V+WS++I
Sbjct: 557 TIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMIC 616
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
YA G G++A+ LF M+ L V PN + VL AC+H+G V++GLH ++ M + YG+
Sbjct: 617 AYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLD 676
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P EH SC+VDLL R+G V+EA I M +AD V+W++LL++
Sbjct: 677 PQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSN 720
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 169/619 (27%), Positives = 300/619 (48%), Gaps = 89/619 (14%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC------------- 83
T++ ++ CS+L++L G++VH ++++ P + + N +L Y K
Sbjct: 8 TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67
Query: 84 ------------------GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
G++ A+ FD MP+R+VVSW ++++ N +I++++
Sbjct: 68 PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + TF I+KACSG+ LG Q+H I+ + ++ +AL+ MY+K
Sbjct: 128 RMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH--------------- 230
++ DA VF + +++ W ++IA + + +E L F +ML
Sbjct: 188 KLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247
Query: 231 --------------HGAYQPNEFIFGSV--------FSACSNF--ARILFNEIDSPDLAS 266
HG ++F + S+ ++ C A +FN + +P S
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQS 307
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
+NA+I G A +A+ +F ++ L D +++ L AC +G+Q+H +
Sbjct: 308 YNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAV 367
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
K G N+ V N IL MY KC L A L+F+E+ + D+VSWN+IIAA H Q EE+
Sbjct: 368 KCGLGFNICVANTILDMYGKCGALMEACLIFEEMERR-DAVSWNAIIAA---HEQNEEIV 423
Query: 387 R---LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
+ LF ML S ++PD T+ V+ ACA +L T++H I K+G+ D FV + L+
Sbjct: 424 KTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALV 483
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
D+Y KCG L A K+ +E VSW+S+I G++ + A + F++M +G+ P+
Sbjct: 484 DMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNY 543
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH-----CSCVVDLLARAGCVHEAE 558
T VL C+++ +E G ++ I+ + H S +VD+ ++ G + ++
Sbjct: 544 TYATVLDVCANMATIELGKQIHA------QILKLQLHSDVYIASTLVDMYSKCGNMQDSR 597
Query: 559 DFINQMACDADIVVWKSLL 577
+ + A D V W +++
Sbjct: 598 -LMFEKAPKRDYVTWSAMI 615
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 141/544 (25%), Positives = 250/544 (45%), Gaps = 53/544 (9%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
+ STYA + +C+ L + +LG ++H H L S D ++ L+MY KC + DA
Sbjct: 237 VSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKV 296
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F+ +P S+ A+I G ++ Q A+ ++ + ++ + + + + ACS +
Sbjct: 297 FNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRH 356
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G QLH +K G ++ N ++ MY K +++A +F + R+D SW ++IAA
Sbjct: 357 LEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAH 416
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NF---------------- 251
+ ++ L F ML +P++F +GSV AC+ N+
Sbjct: 417 EQNEEIVKTLSLFVSML-RSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLD 475
Query: 252 -------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
A + ++ SWN++I+G +S + A FS+M +
Sbjct: 476 WFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLE 535
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
++PD T ++L C T+ G Q+H+ I+K+ S+V + + ++ MY+KC + +
Sbjct: 536 MGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQD 595
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
+ L+F++ K D V+W+++I A H E+ LF M +KP+H F V+ ACA
Sbjct: 596 SRLMFEKAPKR-DYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACA 654
Query: 413 KMASLEMVTQLHCY---ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVV 468
M ++ LH + ++ GL + + ++D+ + G + A KL M D V
Sbjct: 655 HMGYVD--KGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDV 712
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGV--SPNLVTLVGVLTACSHVGLVEEGLHLYR 526
W +L+ G + A K F + L S V L V VG+ E +
Sbjct: 713 IWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAI---VGMWGEVAKMRS 769
Query: 527 IMEN 530
IM+N
Sbjct: 770 IMKN 773
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 226/444 (50%), Gaps = 34/444 (7%)
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
+ TF I++ CS L ++ G+Q+H +I + + N L+ Y K ++ A VF
Sbjct: 6 KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL 255
+ ++DV SW ++I ++ +G FA+ L
Sbjct: 66 RMPQRDVISWNTLIFGYAGIGN-------------------------------MGFAQSL 94
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F+ + D+ SWN+L++ + +++ +F MR ++ D T +L AC G
Sbjct: 95 FDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDY 154
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
G+QVH I+MGF+++V +A++ MY+KC L +A VF+E+ + + V W+++IA
Sbjct: 155 GLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPER-NLVCWSAVIAG 213
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
+Q+++ E +LF ML + T+ V +CA +++ ++ TQLH + K+ A+D
Sbjct: 214 YVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYD 273
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
+ +D+Y KC + A K+FN + NP S++++I+GYA+ G +AL +F ++
Sbjct: 274 SIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQR 333
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
+ + ++L G LTACS + EG+ L+ + + G+ + ++D+ + G +
Sbjct: 334 NNLGFDEISLSGALTACSVIKRHLEGIQLHG-LAVKCGLGFNICVANTILDMYGKCGALM 392
Query: 556 EAEDFINQMACDADIVVWKSLLAS 579
EA +M D V W +++A+
Sbjct: 393 EACLIFEEME-RRDAVSWNAIIAA 415
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 203/430 (47%), Gaps = 52/430 (12%)
Query: 16 NEALVAYDFSQN--NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQ 73
++ L A D Q+ N+ + +G ++ACS ++ G ++H + ++ +
Sbjct: 319 DQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVA 378
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N IL+MYGKCG+L +A + F++M +R+ VSW A+IA QN + + L++ ML+S +
Sbjct: 379 NTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTME 438
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P FT+GS++KAC+G ++ G ++H +IKS G +AL+ MY K +++A +
Sbjct: 439 PDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKI 498
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA- 252
+ + K SW S+I+ FS A +F++ML G P+ + + +V C+N A
Sbjct: 499 HARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGII-PDNYTYATVLDVCANMAT 557
Query: 253 ---------------------------------------RILFNEIDSPDLASWNALIAG 273
R++F + D +W+A+I
Sbjct: 558 IELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICA 617
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM----G 329
A H +A++LF EM+ + P+ S+L AC + +G+ Y KM G
Sbjct: 618 YAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLH---YFQKMLSHYG 674
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
D + + ++ + + + AL + + + AD V W ++++ C E + F
Sbjct: 675 LDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAF 734
Query: 390 SRMLASQIKP 399
+ +L Q+ P
Sbjct: 735 NSLL--QLDP 742
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 196/582 (33%), Positives = 303/582 (52%), Gaps = 42/582 (7%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y L+ +C + L +G++VH+HIL +P+V + N +L +Y CGS+ +AR FDK
Sbjct: 31 YVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFS 90
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
++VVSW MI+G + +A L+ M Q + P +FTF SI+ ACS + GR+
Sbjct: 91 NKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGRE 150
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H V+++ + NALI+MY K + DAR VF +A +D SW ++ A+++ GY
Sbjct: 151 IHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGY 210
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------------------- 252
E+L ++ ML +P+ + +V SAC + A
Sbjct: 211 GEESLKTYHAMLQERV-RPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVST 269
Query: 253 ---------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
R +F + D+ +WN +I G EA F M + + P
Sbjct: 270 ALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAP 329
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D T ++L AC L +G ++H+ K G S+V NA++ MY+K + +A VF
Sbjct: 330 DRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVF 389
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+ K D VSW +++ +Q E F F +ML +K + IT+ V+ AC+ +L
Sbjct: 390 DRMPKR-DVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVAL 448
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
+ ++H + K GL D+ V N LM +Y KCGS+ A ++F M DVV+W++LI G
Sbjct: 449 KWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGL 508
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
Q G G EAL+ + M+S G+ PN T V VL+AC LVEEG + M +YGI+PT
Sbjct: 509 GQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPT 568
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H +C+VD+LARAG + EAED I + +W +LLA+
Sbjct: 569 EKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAA 610
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 224/490 (45%), Gaps = 44/490 (8%)
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
+ G + + ++++C + +G+Q+H H+++ ++ N L+ +Y +
Sbjct: 21 RKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVN 80
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
+AR +F + K V SW MI+ ++ G EA F ++ +P++F F S+ SAC
Sbjct: 81 EARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFT-LMQQERLEPDKFTFVSILSAC 139
Query: 249 SNF----------------------------------------ARILFNEIDSPDLASWN 268
S+ AR +F+ + S D SW
Sbjct: 140 SSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWT 199
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
L A E++ + M + P +T ++L AC L +G Q+H++I++
Sbjct: 200 TLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVES 259
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
+ S+V V A+ MY KC +A VF+ L D ++WN++I + Q EE
Sbjct: 260 EYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYR-DVIAWNTMIRGFVDSGQLEEAHGT 318
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
F RML + PD T+ V+ ACA+ L ++H K GL DV N L+++Y K
Sbjct: 319 FHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSK 378
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
GS+ AR++F+ M DVVSW++L+ YA E+ F +M GV N +T + V
Sbjct: 379 AGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCV 438
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
L ACS+ ++ G ++ + G++ + ++ + + G V +A M+
Sbjct: 439 LKACSNPVALKWGKEIHAEVVKA-GLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMR- 496
Query: 569 DIVVWKSLLA 578
D+V W +L+
Sbjct: 497 DVVTWNTLIG 506
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 96/181 (53%), Gaps = 4/181 (2%)
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D + ++ +C K L + Q+H +I + G+ +V++ N L+ +Y CGS+ AR+LF
Sbjct: 27 DSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLF 86
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ N VVSW+ +I GYA G EA LFT M+ + P+ T V +L+ACS ++
Sbjct: 87 DKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLN 146
Query: 520 EGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G ++ R+ME G+ + ++ + A+ G V +A + MA D V W +L
Sbjct: 147 WGREIHVRVMEA--GLANDTTVGNALISMYAKCGSVRDARRVFDAMA-SRDEVSWTTLTG 203
Query: 579 S 579
+
Sbjct: 204 A 204
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 201/616 (32%), Positives = 316/616 (51%), Gaps = 43/616 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S C+ ++ + V + + + +T A L+ +C L L LG ++H +
Sbjct: 120 NTLISGYCQHGMFRNS-VGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAV 178
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + DV + +++MYGKC SL+DA F M +RN VSW A IAGC QN Q ++
Sbjct: 179 KTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGME 238
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L++QM + G+ Q + S ++C+ + + RQLHAH IK+ S + A++ +Y
Sbjct: 239 LFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYA 298
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K ++DAR F G+ +V + +M+ + G EA+ F M G +
Sbjct: 299 KAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGV-GFDVISLS 357
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
VFSAC+ A ++F E++
Sbjct: 358 GVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQR 417
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D SWNA+IA + + + ++ +EM + PD T S+L AC G +L G+ VH
Sbjct: 418 DSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVH 477
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
IK G + V + ++ MY KC + A + +G + VSWNSII+ Q+
Sbjct: 478 GKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQ-ELVSWNSIISGFSLTKQS 536
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
EE R FS ML +KPDH T+ V+ CA +A++E+ Q+H I K + D ++ + L
Sbjct: 537 EEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTL 596
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y KCG++ + +F D VSW+++I GYA G G EAL++F RM+ V PN
Sbjct: 597 VDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNH 656
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
T V VL ACSHVGL+++G + +M + Y ++P EH +C+VD+L R+ EA +FI
Sbjct: 657 ATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIR 716
Query: 563 QMACDADIVVWKSLLA 578
M +AD VVWK+LL+
Sbjct: 717 SMPIEADAVVWKTLLS 732
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 177/621 (28%), Positives = 295/621 (47%), Gaps = 83/621 (13%)
Query: 33 IRPSTYAGLISACSSL--RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ +T++ L C+S +L G+ H +L+S P + N +L MY +CG A
Sbjct: 15 VATATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAH 74
Query: 91 MGFDKMPQRN-------------------------------VVSWTAMIAGCSQNYQEND 119
FD MP R+ VVSW +I+G Q+ +
Sbjct: 75 GVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRN 134
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
++ L ++M + GV + T ++K+C GL + LG Q+HA +K+ + + A +AL+
Sbjct: 135 SVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVD 194
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM--LHHGAYQPN 237
MY K + DA F G+ ++ SWG+ IA + + F +M L G QP
Sbjct: 195 MYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQP- 253
Query: 238 EFIFGSVFSACSNF----------------------------------------ARILFN 257
+ S F +C+ AR F
Sbjct: 254 --AYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFI 311
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
+ ++ + NA++ G+ EAM LF M + D +++ + AC +Q
Sbjct: 312 GLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQ 371
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G+QVH +K GFD +V V NAIL +Y KC L A LVF+E+ + DSVSWN+IIAA
Sbjct: 372 GLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEM-EQRDSVSWNAIIAALE 430
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
Q+ E+ + ML S ++PD T+ V+ ACA + SLE +H K+GL D F
Sbjct: 431 QNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAF 490
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
V + ++D+Y KCG++ A+KL + + ++VSW+S+I G++ +EA + F+ M +G
Sbjct: 491 VSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMG 550
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
V P+ T VL C+++ +E G ++ +I++ E ++ S +VD+ A+ G + +
Sbjct: 551 VKPDHFTYATVLDTCANLATIELGKQIHGQIIKQE--MLGDEYISSTLVDMYAKCGNMPD 608
Query: 557 AEDFINQMACDADIVVWKSLL 577
+ + + A D V W +++
Sbjct: 609 SL-LMFEKARKLDFVSWNAMI 628
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 210/446 (47%), Gaps = 40/446 (8%)
Query: 138 TFGSIIKACSGLGSVCL--GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
TF + + C+ G L G+ HA ++ S N L+ MY + A VF
Sbjct: 19 TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL 255
+ +D SW +M+ A+ V + ++ A L
Sbjct: 79 TMPHRDTVSWNTMLTAY-------------------------------VHAGDTDTAASL 107
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F + PD+ SWN LI+G H ++ L EM R + D T+ LL +C G L
Sbjct: 108 FGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDL 167
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
G+Q+H+ +K G +++V +A++ MY KC L +AL F +G+ +SVSW + IA
Sbjct: 168 ALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGER-NSVSWGAAIAG 226
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
C+Q+ Q LF +M + + +CA M L QLH + K + D
Sbjct: 227 CVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSD 286
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
V ++D+Y K G+L AR+ F + + +V + +++++G + G G EA++LF M
Sbjct: 287 RVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTR 346
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI-MENEYGI-IPTREHCSCVVDLLARAGC 553
GV ++++L GV +AC+ V +GL ++ + +++ + + + R + ++DL +
Sbjct: 347 SGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVR---NAILDLYGKCKA 403
Query: 554 VHEAEDFINQMACDADIVVWKSLLAS 579
+ EA +M D V W +++A+
Sbjct: 404 LVEAYLVFQEME-QRDSVSWNAIIAA 428
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 205/614 (33%), Positives = 333/614 (54%), Gaps = 43/614 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VS +Q EAL+ + Q + A +I AC+ L ++ G ++H ++ S
Sbjct: 100 VSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSG 159
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
DV + +++ Y K G++E+AR+ FD++ ++ V+WT +IAG ++ + +++L+
Sbjct: 160 FDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFA 219
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
QM ++ V+P ++ S++ ACS L + G+Q+HA+V++ + N LI YTK +
Sbjct: 220 QMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCN 279
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
R+ R +F + K++ SW +MI+ + + ++ EA+ F EM G ++P+ F SV
Sbjct: 280 RVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLG-WKPDGFACTSVL 338
Query: 246 SAC-------------------------------------SNF---ARILFNEIDSPDLA 265
++C SN A+ +F+ + ++
Sbjct: 339 TSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVI 398
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
S+NA+I G +S +EA+ LF EMR R P LT SLL L Q+H I
Sbjct: 399 SYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLI 458
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
IK G ++ +A++ +Y+KCS + +A VF+E+ + D V WN++ QH + EE
Sbjct: 459 IKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEK-DIVVWNAMFFGYTQHLENEEA 517
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
+L+S + S+ KP+ TF ++ A + +ASL Q H + K GL F FV N L+D+
Sbjct: 518 LKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDM 577
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y KCGS+ ARK+FN DVV W+S+I +AQ G +EAL +F M G+ PN VT
Sbjct: 578 YAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTF 637
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
V VL+ACSH G VE+GL+ + M +GI P EH +CVV LL R+G + EA++FI +M
Sbjct: 638 VAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMP 696
Query: 566 CDADIVVWKSLLAS 579
+ +VW+SLL++
Sbjct: 697 IEPAAIVWRSLLSA 710
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 171/591 (28%), Positives = 294/591 (49%), Gaps = 45/591 (7%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
N+R + +A L+ S + + +H I++S Q D L N ++N+ K +++A
Sbjct: 22 NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNA 81
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSG 148
R+ FDKMP +N+++W++M++ SQ +A+ +++ + +SG P +F S+I+AC+
Sbjct: 82 RVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQ 141
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
LG V G QLH V++S + +LI Y+K I +AR VF ++ K +W ++
Sbjct: 142 LGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTI 201
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------- 249
IA ++K G +L F +M P+ ++ SV SACS
Sbjct: 202 IAGYTKCGRSAVSLELFAQMRETNVV-PDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRG 260
Query: 250 ---------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
R LF+++ ++ SW +I+G +S EAM LF
Sbjct: 261 TEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFG 320
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
EM PDG S+L +C R L QG QVH+Y IK +S+ V N ++ MYAK +
Sbjct: 321 EMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSN 380
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+L +A VF + + + +S+N++I + E LF M P +TF ++
Sbjct: 381 LLIDAKKVFDVMAEQ-NVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLL 439
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
G A + +LE+ Q+H I K G++ D+F + L+D+Y KC + AR +F M D+V
Sbjct: 440 GVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIV 499
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
W+++ GY Q +EALKL++ ++ PN T ++TA S++ + G + +
Sbjct: 500 VWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQL 559
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ G+ + +VD+ A+ G + EA N + D+V W S++++
Sbjct: 560 V-KMGLDFCPFVTNALVDMYAKCGSIEEARKMFNS-SIWRDVVCWNSMIST 608
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 199/585 (34%), Positives = 321/585 (54%), Gaps = 46/585 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T+A ++ +CSSL G ++H + DVV + +L+MY KC L+ + F
Sbjct: 175 TTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHS 234
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP++N VSW+A+IAGC QN ++L+ +M ++GV Q TF S+ ++C+GL ++ LG
Sbjct: 235 MPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLG 294
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
QLH H +K++ G+ ++ A + MY K + + DA+ +F+ + ++ S+ ++I +++
Sbjct: 295 SQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARS 354
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC----------------------SNF-- 251
+EAL F +L +E F AC SN
Sbjct: 355 DKGIEALGMF-RLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICV 413
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A ++F E+ S D SWNA+IA + N + +SLF M +
Sbjct: 414 ANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGM 473
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK--MGFDSNVPVCNAILTMYAKCSVLCNA 353
PD T S+L AC G L GM++H+ IIK +G DS V + A++ MY+KC ++ A
Sbjct: 474 EPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGI--ALIDMYSKCGMMEKA 531
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
+ L + VSWN+II+ Q+EE + FS+ML + PD+ T+ ++ CA
Sbjct: 532 EKLHDRLAEQT-VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCAN 590
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ ++E+ Q+H I K L D ++ + L+D+Y KCG++ + +F N D V+W+++
Sbjct: 591 LVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAM 650
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
+ GYAQ G G+EALK+F M+ V PN T + VL AC H+GLVE+GLH + M + YG
Sbjct: 651 VCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYG 710
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ P EH SCVVD++ R+G V +A + I M +AD V+W++LL+
Sbjct: 711 LDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 755
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 175/616 (28%), Positives = 293/616 (47%), Gaps = 77/616 (12%)
Query: 34 RPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE------ 87
+ T++ + CS ++L G++ H ++L++ +P V + N ++ MY KC LE
Sbjct: 41 KKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVF 100
Query: 88 -------------------------DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
A+ FD MP+R+VVSW ++I+G N I
Sbjct: 101 DGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVID 160
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+++QM + G + + TF ++K+CS L G Q+H +K ++ +AL+ MY
Sbjct: 161 VFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYA 220
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K ++ + F + K+ SW ++IA + L F EM G ++ F
Sbjct: 221 KCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGV-GVSQSTFA 279
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
SVF +C+ A+ LFN + +
Sbjct: 280 SVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNH 339
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+L S+NA+I G A EA+ +F ++ L D +++ AC +G+QVH
Sbjct: 340 NLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVH 399
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+K SN+ V NAIL MY KC L A LVF+E+ + D+VSWN+IIAA Q+
Sbjct: 400 GLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAAHEQNGNE 458
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
E+ LF ML S ++PD T+ V+ ACA +L ++H I K+ L D FV L
Sbjct: 459 EKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIAL 518
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y KCG + A KL + + VVSW+++I G++ +EA K F++M +GV P+
Sbjct: 519 IDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDN 578
Query: 503 VTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
T +L C+++ VE G ++ +I++ E + S +VD+ ++ G + + + I
Sbjct: 579 FTYATILDTCANLVTVELGKQIHAQIIKKE--LQSDAYISSTLVDMYSKCGNMQDFQ-LI 635
Query: 562 NQMACDADIVVWKSLL 577
+ A + D V W +++
Sbjct: 636 FEKAPNRDFVTWNAMV 651
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 239/490 (48%), Gaps = 44/490 (8%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
+ + ST+A + +C+ L +L+LG ++H H L + DVV+ L+MY KC +L
Sbjct: 267 QKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNL 326
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
DA+ F+ +P N+ S+ A+I G +++ + +A+ ++ + +SG+ + + +AC
Sbjct: 327 SDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRAC 386
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
+ + G Q+H +KS S++ NA++ MY K +++A VF + +D SW
Sbjct: 387 AVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWN 446
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------- 251
++IAA + G E + L F ML G +P+EF +GSV AC+ +
Sbjct: 447 AIIAAHEQNGNEEKTLSLFVWMLQSG-MEPDEFTYGSVLKACAGWQALNCGMEIHNRIIK 505
Query: 252 -------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
A L + + + SWNA+I+G + + EA
Sbjct: 506 SRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKT 565
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
FS+M + + PD T ++L C +T+ G Q+H+ IIK S+ + + ++ MY+K
Sbjct: 566 FSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSK 625
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
C + + L+F E N D V+WN+++ QH EE ++F M +KP+H TF
Sbjct: 626 CGNMQDFQLIF-EKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLA 684
Query: 407 VMGACAKMASLEM-VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-N 464
V+ AC M +E + H ++ GL + + ++DI + G + A +L M
Sbjct: 685 VLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFE 744
Query: 465 PDVVSWSSLI 474
D V W +L+
Sbjct: 745 ADAVIWRTLL 754
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 218/447 (48%), Gaps = 44/447 (9%)
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
TF I + CS ++C G+Q HA +I +E + N LI MY K + A VF G+
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFN 257
++D SW +M+ FG A+ LF+
Sbjct: 104 PQRDTVSWNAML-------------------------------FGYAGRGDIGVAQKLFD 132
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
+ D+ SWN+LI+G + + + + +F +M + D T +L +C
Sbjct: 133 AMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGG 192
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G+Q+H +KMGFD +V +A+L MYAKC L ++ F + + + VSW++IIA C+
Sbjct: 193 GIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEK-NWVSWSAIIAGCV 251
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
Q++ LF M + + TF V +CA +++L + +QLH + KT DV
Sbjct: 252 QNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVV 311
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
+ +D+Y+KC +L A+KLFN + N ++ S++++I+GYA+ G EAL +F ++ G
Sbjct: 312 IGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSG 371
Query: 498 VSPNLVTLVGVLTACSHV-----GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAG 552
+ + V+L G AC+ + GL GL + + ++ + + ++D+ + G
Sbjct: 372 LGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICV------ANAILDMYGKCG 425
Query: 553 CVHEAEDFINQMACDADIVVWKSLLAS 579
+ EA +M D V W +++A+
Sbjct: 426 ALVEACLVFEEMV-SRDAVSWNAIIAA 451
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 203/432 (46%), Gaps = 56/432 (12%)
Query: 7 SSLCKQNL--YNEALVAYDFSQN------------NTNIRIRPSTYAGLISACSSLRSLQ 52
+SL NL YN +V Y S + + + + +G AC+ ++
Sbjct: 334 NSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDL 393
Query: 53 LGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCS 112
G +VH + S CQ ++ + N IL+MYGKCG+L +A + F++M R+ VSW A+IA
Sbjct: 394 EGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHE 453
Query: 113 QNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
QN E + L++ MLQSG+ P +FT+GS++KAC+G ++ G ++H +IKS G
Sbjct: 454 QNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSF 513
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
ALI MY+K + A + +A + V SW ++I+ FS EA F++ML G
Sbjct: 514 VGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMG 573
Query: 233 AYQPNEFIFGSVFSACSNFA---------------------------------------- 252
P+ F + ++ C+N
Sbjct: 574 V-DPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDF 632
Query: 253 RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
+++F + + D +WNA++ G A H EA+ +F M+ + P+ T ++L AC
Sbjct: 633 QLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHM 692
Query: 313 LTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+ +G+ HS + G D + + ++ + + + AL + + + AD+V W +
Sbjct: 693 GLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRT 752
Query: 372 IIAACLQHNQAE 383
+++ C H E
Sbjct: 753 LLSICKIHGNVE 764
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 196/582 (33%), Positives = 308/582 (52%), Gaps = 42/582 (7%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y L+ +C + L +G++VH+HIL +P+V + N +L +Y CGS+ +AR FDK
Sbjct: 47 YVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFS 106
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
++VVSW MI+G + +A L+ M Q G+ P +FTF SI+ ACS ++ GR+
Sbjct: 107 NKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGRE 166
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H V+++ ++ NALI+MY K + DAR VF +A +D SW ++ A+++ GY
Sbjct: 167 VHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGY 226
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------------------- 252
E+L ++ ML G +P+ + +V SAC + A
Sbjct: 227 AQESLKTYHAMLQEGV-RPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVST 285
Query: 253 ---------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
R +F + + D+ +WN +I G+ EA +F M + P
Sbjct: 286 ALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAP 345
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D +T ++L AC L G ++H+ +K G S+V NA++ MY+K + +A VF
Sbjct: 346 DRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVF 405
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+ K D VSW +++ Q E F F +ML ++ + IT+ V+ AC+ +L
Sbjct: 406 DRMPKR-DVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVAL 464
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
+ ++H + K G+ D+ V N LM +Y KCGS+ A ++ M DVV+W++LI G
Sbjct: 465 KWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGL 524
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
AQ G G EAL+ F M+S + PN T V V++AC LVEEG + M +YGI+PT
Sbjct: 525 AQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPT 584
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H +C+VD+LARAG + EAED I M +W +LLA+
Sbjct: 585 EKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAA 626
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 229/490 (46%), Gaps = 44/490 (8%)
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
Q G + + ++++C + +G+Q+H H+++ ++ N L+ +Y +
Sbjct: 37 QKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVN 96
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
+AR +F + K V SW MI+ ++ G EA F M G +P++F F S+ SAC
Sbjct: 97 EARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEG-LEPDKFTFVSILSAC 155
Query: 249 SNF----------------------------------------ARILFNEIDSPDLASWN 268
S+ AR +F+ + S D SW
Sbjct: 156 SSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWT 215
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
L A A E++ + M + P +T ++L AC L +G Q+H+ I++
Sbjct: 216 TLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVES 275
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
S+V V A+ MY KC + +A VF+ L N D ++WN++I + Q EE +
Sbjct: 276 EHHSDVRVSTALTKMYIKCGAVKDAREVFECL-PNRDVIAWNTMIGGLVDSGQLEEAHGM 334
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
F RML + PD +T+ ++ ACA+ L ++H K GL DV N L+++Y K
Sbjct: 335 FHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSK 394
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
GS+ AR++F+ M DVVSW++L+ GYA G E+ F +M GV N +T + V
Sbjct: 395 AGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCV 454
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
L ACS+ ++ G ++ + + GI + ++ + + G V +A M+
Sbjct: 455 LKACSNPVALKWGKEIHAEV-VKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTR- 512
Query: 569 DIVVWKSLLA 578
D+V W +L+
Sbjct: 513 DVVTWNTLIG 522
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 190/394 (48%), Gaps = 44/394 (11%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RPS TY ++SAC SL +L+ G+++H I+ S+ DV + + MY KCG+++DAR
Sbjct: 242 VRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAR 301
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F+ +P R+V++W MI G + Q +A ++ +ML+ V P + T+ +I+ AC+ G
Sbjct: 302 EVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPG 361
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ G+++HA +K S + NALI MY+K + DAR VF + ++DV SW +++
Sbjct: 362 GLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVG 421
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE------------ 258
++ G +E+ F +ML G + N+ + V ACSN + + +
Sbjct: 422 GYADCGQVVESFSTFKKMLQQGV-EANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIF 480
Query: 259 ----------------------------IDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ + D+ +WN LI G+A + EA+ F M
Sbjct: 481 ADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVM 540
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSV 349
+ E+ P+ T +++ AC R + +G + + + K G ++ + A+
Sbjct: 541 KSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGH 600
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A V + + W +++AAC H E
Sbjct: 601 LGEAEDVILTMPFKPSAAMWGALLAACRAHGNVE 634
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 99/181 (54%), Gaps = 4/181 (2%)
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D + ++ +C K L + Q+H +I + G+ +V+++N L+ +Y+ CGS+ AR+LF
Sbjct: 43 DSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLF 102
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ N VVSW+ +I GYA G G EA LFT M+ G+ P+ T V +L+ACS +
Sbjct: 103 DKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALN 162
Query: 520 EGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G ++ R+ME G+ + ++ + A+ G V +A + MA D V W +L
Sbjct: 163 WGREVHVRVMEA--GLANNATVGNALISMYAKCGSVRDARRVFDAMA-SRDEVSWTTLTG 219
Query: 579 S 579
+
Sbjct: 220 A 220
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 200/583 (34%), Positives = 307/583 (52%), Gaps = 42/583 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T+A ++ AC+ + LG +VH + DVV +++MY C L+ A F +
Sbjct: 171 ATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCE 230
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP+RN V W+A+IAG +N + + +KLY ML G+ Q TF S ++C+GL + LG
Sbjct: 231 MPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELG 290
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
QLHA+ +K+ G I A + MY K DR++DAR VF+ S ++I +++
Sbjct: 291 TQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQ 350
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
LEAL F L +E +ACS
Sbjct: 351 DQVLEALEIFRS-LQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICV 409
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A ++F++++ D SWNA+IA + + E ++LF M +
Sbjct: 410 ANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTM 469
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD T S++ AC G+ L GM+VH +IK G + V +AI+ MY KC +L A
Sbjct: 470 EPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEK 529
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+ + L + +VSWNSII+ Q E FSRML + PD+ T+ V+ CA +A
Sbjct: 530 IHERLEERT-TVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLA 588
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
++E+ Q+H I K L DV++ + ++D+Y KCG++ +R +F D V+WS++I
Sbjct: 589 TVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMIC 648
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
YA G G++A+KLF M+ V PN + VL AC+H+G V++GLH +R M + YG+
Sbjct: 649 AYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLD 708
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
P EH SC+VDLL R+G V+EA + I M +AD V+W++LL
Sbjct: 709 PQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLG 751
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 180/632 (28%), Positives = 297/632 (46%), Gaps = 86/632 (13%)
Query: 22 YDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYG 81
+ S N N + T++ + CS+L+++ G++ H I ++ P V + N +L Y
Sbjct: 26 HSISSNQMN-PTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYC 84
Query: 82 KC-------------------------------GSLEDARMGFDKMPQRNVVSWTAMIAG 110
KC G++E A+ FD MP+R+VVSW +M++
Sbjct: 85 KCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSC 144
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
QN +I+++ +M + TF ++KAC+G+ LG Q+H I+ S
Sbjct: 145 YLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSD 204
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
++ AL+ MY+ ++ A N+F + ++ W ++IA + + E L + ML
Sbjct: 205 VVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLD 264
Query: 231 HGAYQPNEFIFGSVFSAC------------------SNF--------------------- 251
G ++ F S F +C +NF
Sbjct: 265 EGM-GVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMV 323
Query: 252 -ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
AR +FN +P S NALI G A EA+ +F ++ L D +++ L AC
Sbjct: 324 DARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACS 383
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
+G+Q+H +K G D N+ V N IL MYAKC L A L+F ++ + D+VSWN
Sbjct: 384 AIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDM-EIKDAVSWN 442
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
+IIAA Q+ EE LF ML S ++PD TF V+ ACA +L ++H + K+
Sbjct: 443 AIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKS 502
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
G+ D FV + ++D+Y KCG L A K+ +E VSW+S+I G++ G+ AL F
Sbjct: 503 GMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYF 562
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH-----CSCVV 545
+RM +GV P+ T VL C+++ VE G ++ I+ + H S +V
Sbjct: 563 SRMLQVGVIPDNFTYATVLDICANLATVELGKQIHG------QILKLQLHSDVYIASTIV 616
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
D+ ++ G + ++ + + A D V W +++
Sbjct: 617 DMYSKCGNMQDSR-IMFEKAPKRDYVTWSAMI 647
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 224/447 (50%), Gaps = 40/447 (8%)
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
+ TF I + CS L ++ G+Q HA + + + N L+ Y K + A NVF
Sbjct: 38 KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL 255
+ ++DV SW +MI ++ +G +E FA+ L
Sbjct: 98 KMPQRDVISWNTMIFGYAGVG-NME------------------------------FAQFL 126
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F+ + D+ SWN++++ + +++ +F++MR E+ D T +L AC G
Sbjct: 127 FDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDY 186
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
G+QVH I+MGFDS+V A++ MY+ C L +A +F E+ + +SV W+++IA
Sbjct: 187 GLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPER-NSVCWSAVIAG 245
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
+++++ E +L+ ML + TF +CA +++ E+ TQLH Y KT +D
Sbjct: 246 YVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYD 305
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
V +D+Y KC + ARK+FN NP S ++LI+GYA+ EAL++F ++
Sbjct: 306 NIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQK 365
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN---EYGIIPTREHCSCVVDLLARAG 552
+ + ++L G LTACS + EG+ L+ + ++ I + ++D+ A+ G
Sbjct: 366 SYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVA----NTILDMYAKCG 421
Query: 553 CVHEAEDFINQMACDADIVVWKSLLAS 579
+ EA + M D V W +++A+
Sbjct: 422 ALMEACLIFDDMEI-KDAVSWNAIIAA 447
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/513 (24%), Positives = 236/513 (46%), Gaps = 49/513 (9%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
++ + + + E L Y + + + +T+A +C+ L + +LG ++H + L +
Sbjct: 243 IAGYVRNDRFTEGLKLYKVMLDE-GMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTN 301
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
D ++ L+MY KC + DAR F+ P S A+I G ++ Q +A++++
Sbjct: 302 FGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFR 361
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+ +S + + + + ACS + G QLH +K ++ N ++ MY K
Sbjct: 362 SLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCG 421
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+++A +F + KD SW ++IAA + + E L F ML +P+++ FGSV
Sbjct: 422 ALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSML-RSTMEPDDYTFGSVV 480
Query: 246 SACS-----NF-----------------------------------ARILFNEIDSPDLA 265
AC+ N+ A + ++
Sbjct: 481 KACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTV 540
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SWN++I+G +S A+S FS M ++PD T ++L C T+ G Q+H I
Sbjct: 541 SWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQI 600
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
+K+ S+V + + I+ MY+KC + ++ ++F++ K D V+W+++I A H E+
Sbjct: 601 LKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKR-DYVTWSAMICAYAYHGLGEDA 659
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY---ITKTGLAFDVFVMNGL 442
+LF M +KP+H F V+ ACA M ++ LH + + GL + + +
Sbjct: 660 IKLFEEMQLQNVKPNHTIFISVLRACAHMGFVD--KGLHYFREMRSHYGLDPQMEHYSCM 717
Query: 443 MDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
+D+ + G + A +L M D V W +L+
Sbjct: 718 VDLLGRSGQVNEALELIESMPFEADDVIWRTLL 750
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 185/389 (47%), Gaps = 53/389 (13%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPD--VVLQNHILNMYGKCGSLEDARMGFDKM 96
+G ++ACS+++ G ++H L KC D + + N IL+MY KCG+L +A + FD M
Sbjct: 376 SGALTACSAIKGYLEGIQLHG--LAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDM 433
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++ VSW A+IA QN + + L++ ML+S + P +TFGS++KAC+G ++ G
Sbjct: 434 EIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGM 493
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H VIKS G +A+I MY K +++A + + + SW S+I+ FS
Sbjct: 494 EVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEK 553
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------------------ 252
AL +F+ ML G P+ F + +V C+N A
Sbjct: 554 QGENALSYFSRMLQVGVI-PDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIA 612
Query: 253 ----------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
RI+F + D +W+A+I A H +A+ LF EM+ + +
Sbjct: 613 STIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVK 672
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM----GFDSNVPVCNAILTMYAKCSVLCN 352
P+ S+L AC + +G+ Y +M G D + + ++ + + +
Sbjct: 673 PNHTIFISVLRACAHMGFVDKGLH---YFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNE 729
Query: 353 ALLVFKELGKNADSVSWNSIIAAC-LQHN 380
AL + + + AD V W +++ C LQ N
Sbjct: 730 ALELIESMPFEADDVIWRTLLGICRLQGN 758
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 198/583 (33%), Positives = 316/583 (54%), Gaps = 40/583 (6%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T++ ++ ACS + LG +VH + + DVV + +++MY KC L+ A F +
Sbjct: 139 ATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFRE 198
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP+RN+V W+A+IAG QN + + +KL+ ML+ G+ Q T+ S+ ++C+GL + LG
Sbjct: 199 MPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLG 258
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
QLH H +KS+ I A + MY K DR+ DA VF+ + S+ ++I +++
Sbjct: 259 TQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQ 318
Query: 216 GYELEAL----------CHFNEMLHHGAYQPNEFIFG----------------------- 242
L+AL F+E+ GA I G
Sbjct: 319 DQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVA 378
Query: 243 ----SVFSACSNFAR--ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
++ C +F++++ D SWNA+IA + + +SLF M +
Sbjct: 379 NTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTME 438
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD T S++ AC G+ L GM++H I+K G + V +A++ MY KC +L A +
Sbjct: 439 PDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKI 498
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
L + +VSWNSII+ Q+E R FS+ML + PD+ T+ V+ CA MA+
Sbjct: 499 HDRLEEKT-TVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMAT 557
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
+E+ Q+H I K L DV++ + L+D+Y KCG++ +R +F D V+WS++I
Sbjct: 558 IELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICA 617
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
YA G G++A+KLF M+ L V PN + VL AC+H+G V++GLH ++IM++ YG+ P
Sbjct: 618 YAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDP 677
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH SC+VDLL R+ V+EA I M +AD V+W++LL++
Sbjct: 678 HMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSN 720
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 162/619 (26%), Positives = 295/619 (47%), Gaps = 89/619 (14%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQP---------------------------- 68
T++ ++ CS+L++L G++ H ++++ P
Sbjct: 8 TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67
Query: 69 ---DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
DV+ N ++ Y + G++ A+ FD MP+R+VVSW ++++ N +I++++
Sbjct: 68 PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + TF ++KACSG+ LG Q+H I+ + ++ +AL+ MY+K
Sbjct: 128 RMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH--------------- 230
++ A +F + +++ W ++IA + + +E L F +ML
Sbjct: 188 KLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247
Query: 231 --------------HGAYQPNEFIFGSV--------FSACSNF--ARILFNEIDSPDLAS 266
HG ++F + S+ ++ C A +FN + +P S
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQS 307
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
+NA+I G A +A+ +F ++ L D +++ L AC +G+Q+H +
Sbjct: 308 YNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAV 367
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
K G N+ V N IL MY KC L A +F ++ + D+VSWN+IIAA H Q EE+
Sbjct: 368 KCGLGFNICVANTILDMYGKCGALVEACTIFDDMERR-DAVSWNAIIAA---HEQNEEIV 423
Query: 387 R---LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
+ LF ML S ++PD T+ V+ ACA +L ++H I K+G+ D FV + L+
Sbjct: 424 KTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALV 483
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
D+Y KCG L A K+ + +E VSW+S+I G++ + A + F++M +GV P+
Sbjct: 484 DMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNF 543
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH-----CSCVVDLLARAGCVHEAE 558
T VL C+++ +E G ++ I+ H S +VD+ ++ G + ++
Sbjct: 544 TYATVLDVCANMATIELGKQIHA------QILKLNLHSDVYIASTLVDMYSKCGNMQDSR 597
Query: 559 DFINQMACDADIVVWKSLL 577
+ + D V W +++
Sbjct: 598 -LMFEKTPKRDYVTWSAMI 615
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 140/544 (25%), Positives = 254/544 (46%), Gaps = 53/544 (9%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
+ STYA + +C+ L + +LG ++H H L S D ++ L+MY KC + DA
Sbjct: 237 VSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKV 296
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F+ +P S+ A+I G ++ Q A++++ + ++ + + + + ACS +
Sbjct: 297 FNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGH 356
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G QLH +K G ++ N ++ MY K +++A +F + R+D SW ++IAA
Sbjct: 357 LEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAH 416
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NF---------------- 251
+ ++ L F ML +P++F +GSV AC+ N+
Sbjct: 417 EQNEEIVKTLSLFVSML-RSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLD 475
Query: 252 -------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
A + + ++ SWN++I+G +S + A FS+M +
Sbjct: 476 WFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLE 535
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
++PD T ++L C T+ G Q+H+ I+K+ S+V + + ++ MY+KC + +
Sbjct: 536 MGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQD 595
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
+ L+F++ K D V+W+++I A H E+ +LF M +KP+H F V+ ACA
Sbjct: 596 SRLMFEKTPKR-DYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACA 654
Query: 413 KMASLEMVTQLHCY-ITKTGLAFDVFV--MNGLMDIYIKCGSLGSARKLFNFME-NPDVV 468
M ++ LH + I ++ D + + ++D+ + + A KL M D V
Sbjct: 655 HMGYVD--KGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDV 712
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGV--SPNLVTLVGVLTACSHVGLVEEGLHLYR 526
W +L+ G + A K F + L S V L V ++VG+ E +
Sbjct: 713 IWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVY---ANVGMWGEVAKIRS 769
Query: 527 IMEN 530
IM+N
Sbjct: 770 IMKN 773
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 224/444 (50%), Gaps = 34/444 (7%)
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
+FTF I++ CS L ++ G+Q HA +I + + N L+ Y K + A VF
Sbjct: 6 KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL 255
+ +DV SW +MI FG FA+ L
Sbjct: 66 RMPHRDVISWNTMI-------------------------------FGYAEIGNMGFAQSL 94
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F+ + D+ SWN+L++ + +++ +F MR ++ D T +L AC G
Sbjct: 95 FDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDY 154
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
G+QVH I+MGF+++V +A++ MY+KC L A +F+E+ + + V W+++IA
Sbjct: 155 GLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPER-NLVCWSAVIAG 213
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
+Q+++ E +LF ML + T+ V +CA +++ ++ TQLH + K+ A+D
Sbjct: 214 YVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYD 273
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
+ +D+Y KC + A K+FN + NP S++++I+GYA+ G +AL++F ++
Sbjct: 274 SIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQR 333
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
+S + ++L G LTACS + EG+ L+ + + G+ + ++D+ + G +
Sbjct: 334 TYLSFDEISLSGALTACSVIKGHLEGIQLHG-LAVKCGLGFNICVANTILDMYGKCGALV 392
Query: 556 EAEDFINQMACDADIVVWKSLLAS 579
EA + M D V W +++A+
Sbjct: 393 EACTIFDDME-RRDAVSWNAIIAA 415
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 194/421 (46%), Gaps = 54/421 (12%)
Query: 25 SQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCG 84
S T + + +G ++ACS ++ G ++H + ++ + N IL+MYGKCG
Sbjct: 330 SLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCG 389
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
+L +A FD M +R+ VSW A+IA QN + + L++ ML+S + P FT+GS++K
Sbjct: 390 ALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVK 449
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
AC+G ++ G ++H ++KS G +AL+ MY K +++A + + K S
Sbjct: 450 ACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVS 509
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------ 252
W S+I+ FS A +F++ML G P+ F + +V C+N A
Sbjct: 510 WNSIISGFSSQKQSENAQRYFSQMLEMGVI-PDNFTYATVLDVCANMATIELGKQIHAQI 568
Query: 253 ----------------------------RILFNEIDSPDLASWNALIAGVASHSNANEAM 284
R++F + D +W+A+I A H + +A+
Sbjct: 569 LKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAI 628
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACI------GRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
LF EM+ + P+ S+L AC L +Q MQ H G D ++ +
Sbjct: 629 KLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSH-----YGLDPHMEHYS 683
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
++ + + + AL + + + AD V W ++++ C E + F+ +L Q+
Sbjct: 684 CMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLL--QLD 741
Query: 399 P 399
P
Sbjct: 742 P 742
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 205/598 (34%), Positives = 316/598 (52%), Gaps = 47/598 (7%)
Query: 26 QNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKC--QPDVVLQNHILNMYGKC 83
+ +++++I+P L+ C R L+ + VH +L SK +VL NH+ + Y KC
Sbjct: 61 KTDSHLQIQP--LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKC 118
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
++ A FD+M QRN SWT +IAG ++N D + + +M G+ P QF + I+
Sbjct: 119 SDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGIL 178
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
+ C GL S+ LG +HA ++ SH AL+ MY K I D+ VF+ + +V
Sbjct: 179 QICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVV 238
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG--------------------- 242
SW +MI F+ L+A F M+ G + G
Sbjct: 239 SWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYA 298
Query: 243 ----------------SVFSACSNF--ARILFNE--IDSPDLASWNALIAGVASHSNANE 282
+ S C + AR +FN I A WNA+I+G +
Sbjct: 299 LELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEK 358
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN-VPVCNAIL 341
A+ LF++M ++ D T S+ A L G +VH+ IK G + N V + NA+
Sbjct: 359 ALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVA 418
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
YAKC L + VF + ++ D +SW S++ A Q ++ ++ +FS M A I P+
Sbjct: 419 NAYAKCGSLEDVRKVFNRM-EDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQ 477
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
TF+ V+ +CA + LE Q+H I K GL D + + L+D+Y KCG LG A+K+FN
Sbjct: 478 FTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNR 537
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
+ N D VSW+++I G+AQ G D+AL+LF RM LGV PN VT + VL ACSH GLVEEG
Sbjct: 538 ISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEG 597
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
L +++M+ YG++P EH +C+VDLL+R G +++A +FI++M + + +VW++LL +
Sbjct: 598 LQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGA 655
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 153/291 (52%), Gaps = 15/291 (5%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV-LQNHILNMYGKCGSLED 88
+I + TY + +A ++L+ L LG+KVH + S + + V + N + N Y KCGSLED
Sbjct: 370 DIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLED 429
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
R F++M R+++SWT+++ SQ + + AI+++ M G+ P QFTF S++ +C+
Sbjct: 430 VRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCAN 489
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
L + G+Q+H + K ++AL+ MY K + DA+ VF+ I+ D SW ++
Sbjct: 490 LCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAI 549
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS-- 261
IA ++ G +AL F M+ G +PN F V ACS+ + F +
Sbjct: 550 IAGHAQHGIVDDALQLFRRMVQLGV-EPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTY 608
Query: 262 ---PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
P++ + ++ ++ + N+AM S M + P+ + +LL AC
Sbjct: 609 GLVPEMEHYACIVDLLSRVGHLNDAMEFISRM---PVEPNEMVWQTLLGAC 656
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 189/427 (44%), Gaps = 50/427 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N ++ +LY L A+D + P T+ G+ A LR + ++V +
Sbjct: 241 NAMITGFTSNDLY---LDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGY 297
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK--MPQRNVVSWTAMIAGCSQNYQEN 118
L + ++ +++M KCGSL++AR F+ + R W AMI+G ++
Sbjct: 298 ALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNE 357
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA-QNAL 177
A++L+ +M Q+ + +T+ S+ A + L + LG+++HA IKS + ++ NA+
Sbjct: 358 KALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAV 417
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
Y K + D R VF+ + +D+ SW S++ A+S+ +A+ F+ M G PN
Sbjct: 418 ANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGI-APN 476
Query: 238 EFIFGSVFSACSNF----------------------------------------ARILFN 257
+F F SV +C+N A+ +FN
Sbjct: 477 QFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFN 536
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
I + D SW A+IAG A H ++A+ LF M + P+ +T +L AC + +
Sbjct: 537 RISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEE 596
Query: 318 GMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
G+Q + K G + I+ + ++ L +A+ + + + W +++ AC
Sbjct: 597 GLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGAC 656
Query: 377 LQHNQAE 383
H E
Sbjct: 657 RVHGNVE 663
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 205/598 (34%), Positives = 316/598 (52%), Gaps = 47/598 (7%)
Query: 26 QNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKC--QPDVVLQNHILNMYGKC 83
+ +++++I+P L+ C R L+ + VH +L SK +VL NH+ + Y KC
Sbjct: 61 KTDSHLQIQP--LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKC 118
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
++ A FD+M QRN SWT +IAG ++N D + + +M G+ P QF + I+
Sbjct: 119 SDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGIL 178
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
+ C GL S+ LG +HA ++ SH AL+ MY K I D+ VF+ + +V
Sbjct: 179 QICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVV 238
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG--------------------- 242
SW +MI F+ L+A F M+ G + G
Sbjct: 239 SWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYA 298
Query: 243 ----------------SVFSACSNF--ARILFNE--IDSPDLASWNALIAGVASHSNANE 282
+ S C + AR +FN I A WNA+I+G +
Sbjct: 299 LELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEK 358
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN-VPVCNAIL 341
A+ LF++M ++ D T S+ A L G +VH+ IK G + N V + NA+
Sbjct: 359 ALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVA 418
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
YAKC L + VF + ++ D +SW S++ A Q ++ ++ +FS M A I P+
Sbjct: 419 NAYAKCGSLEDVRKVFNRM-EDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQ 477
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
TF+ V+ +CA + LE Q+H I K GL D + + L+D+Y KCG LG A+K+FN
Sbjct: 478 FTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNR 537
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
+ N D VSW+++I G+AQ G D+AL+LF RM LGV PN VT + VL ACSH GLVEEG
Sbjct: 538 ISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEG 597
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
L +++M+ YG++P EH +C+VDLL+R G +++A +FI++M + + +VW++LL +
Sbjct: 598 LQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGA 655
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 153/291 (52%), Gaps = 15/291 (5%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV-LQNHILNMYGKCGSLED 88
+I + TY + +A ++L+ L LG+KVH + S + + V + N + N Y KCGSLED
Sbjct: 370 DIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLED 429
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
R F++M R+++SWT+++ SQ + + AI+++ M G+ P QFTF S++ +C+
Sbjct: 430 VRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCAN 489
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
L + G+Q+H + K ++AL+ MY K + DA+ VF+ I+ D SW ++
Sbjct: 490 LCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAI 549
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS-- 261
IA ++ G +AL F M+ G +PN F V ACS+ + F +
Sbjct: 550 IAGHAQHGIVDDALQLFRRMVQLGV-EPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTY 608
Query: 262 ---PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
P++ + ++ ++ + N+AM S M + P+ + +LL AC
Sbjct: 609 GLVPEMEHYACIVDLLSRVGHLNDAMEFISRM---PVEPNEMVWQTLLGAC 656
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 189/427 (44%), Gaps = 50/427 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N ++ +LY L A+D + P T+ G+ A LR + ++V +
Sbjct: 241 NAMITGFTSNDLY---LDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGY 297
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK--MPQRNVVSWTAMIAGCSQNYQEN 118
L + ++ +++M KCGSL++AR F+ + R W AMI+G ++
Sbjct: 298 ALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNE 357
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA-QNAL 177
A++L+ +M Q+ + +T+ S+ A + L + LG+++HA IKS + ++ NA+
Sbjct: 358 KALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAV 417
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
Y K + D R VF+ + +D+ SW S++ A+S+ +A+ F+ M G PN
Sbjct: 418 ANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGI-APN 476
Query: 238 EFIFGSVFSACSNF----------------------------------------ARILFN 257
+F F SV +C+N A+ +FN
Sbjct: 477 QFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFN 536
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
I + D SW A+IAG A H ++A+ LF M + P+ +T +L AC + +
Sbjct: 537 RISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEE 596
Query: 318 GMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
G+Q + K G + I+ + ++ L +A+ + + + W +++ AC
Sbjct: 597 GLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGAC 656
Query: 377 LQHNQAE 383
H E
Sbjct: 657 RVHGNVE 663
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 201/616 (32%), Positives = 317/616 (51%), Gaps = 43/616 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S C++ ++ ++ V + +T A L+ AC L L LG ++H +
Sbjct: 105 NALLSGYCQRGMFRDS-VGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAV 163
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + DV + +++MYGKC SLEDA F M +RN VSW A IAGC QN Q ++
Sbjct: 164 KTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLE 223
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L++QM + G+ Q + S+ ++C+ + + RQLHAH IK++ + + A++ +Y
Sbjct: 224 LFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYA 283
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K D ++DAR F + V + +M+ + G EAL F M G +
Sbjct: 284 KADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSG-IGFDVVSLS 342
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
VFSAC+ A ++F E++
Sbjct: 343 GVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQR 402
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D SWNA+IA + + + ++ +EM + PD T S+L AC G +L G VH
Sbjct: 403 DSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVH 462
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
IK G + V + ++ MY KC ++ A + +G + VSWNSII+ + Q+
Sbjct: 463 GKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQ-ELVSWNSIISGFSLNKQS 521
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
EE + FS ML +KPDH T+ V+ CA +A++E+ Q+H I K + D ++ + L
Sbjct: 522 EEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTL 581
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y KCG++ + +F + D VSW+++I GYA G G EAL++F RM+ V PN
Sbjct: 582 VDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNH 641
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
T V VL ACSHVGL+++G + +M + Y + P EH +C+VD+L R+ EA FI
Sbjct: 642 ATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIR 701
Query: 563 QMACDADIVVWKSLLA 578
M +AD V+WK+LL+
Sbjct: 702 SMPLEADAVIWKTLLS 717
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 211/446 (47%), Gaps = 40/446 (8%)
Query: 138 TFGSIIKACSGLGSVCL--GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
TF + + C+G G L G+ HA ++ S N L+ MY + AR VF
Sbjct: 4 TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL 255
+ +D SW +M+ A++ G + A L
Sbjct: 64 VMPHRDTVSWNTMLTAYAHAGD-------------------------------TGAAASL 92
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F + PD+ SWNAL++G +++ L EM R + PD T+ LL AC G L
Sbjct: 93 FGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDL 152
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
G+Q+H+ +K G + +V +A++ MY KC L +AL F +G+ +SVSW + IA
Sbjct: 153 ALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGER-NSVSWGAAIAG 211
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
C+Q+ Q LF +M + + V +CA + L QLH + K + D
Sbjct: 212 CVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSAD 271
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
V ++D+Y K SL AR+ F + N V + +++++G + G G EAL+LF M
Sbjct: 272 RVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTR 331
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI-MENEYGI-IPTREHCSCVVDLLARAGC 553
G+ ++V+L GV +AC+ V +GL ++ + +++ + + + R + ++DL +
Sbjct: 332 SGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVR---NAILDLYGKCKA 388
Query: 554 VHEAEDFINQMACDADIVVWKSLLAS 579
+ EA +M D V W +++A+
Sbjct: 389 LVEAYLVFQEME-QRDSVSWNAIIAA 413
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 138/555 (24%), Positives = 237/555 (42%), Gaps = 56/555 (10%)
Query: 36 STYAGLISACSSL--RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
+T++ L C+ +L G+ H +L+S P + N +L MY +CG AR F
Sbjct: 3 ATFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVF 62
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
D MP R+ VSW M+ + A L+ G MP
Sbjct: 63 DVMPHRDTVSWNTMLTAYAHAGDTGAAASLF------GAMPD------------------ 98
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
+++ NAL++ Y + D+ + +AR+ V + +A
Sbjct: 99 ---------------PDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLL 143
Query: 214 KLGYELEALCHFNEMLHHGAYQPN---EFIFGS----VFSACSNFARIL--FNEIDSPDL 264
K LE L +H A + + GS ++ C + L F+ + +
Sbjct: 144 KACGGLEDLA-LGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNS 202
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
SW A IAG + + LF +M+ L S+ +C L Q+H++
Sbjct: 203 VSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAH 262
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
IK F ++ V AI+ +YAK L +A F L N + N+++ ++ E
Sbjct: 263 AIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSL-PNHTVQACNAMMVGLVRTGLGAE 321
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
+LF M S I D ++ + V ACA++ Q+HC K+G DV V N ++D
Sbjct: 322 ALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILD 381
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y KC +L A +F ME D VSW+++I Q C ++ + M G+ P+ T
Sbjct: 382 LYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFT 441
Query: 505 LVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
VL AC+ + +E G ++ + +++ G+ S VVD+ + G + EA+ ++
Sbjct: 442 YGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVS--STVVDMYCKCGMITEAQKLHDR 499
Query: 564 MACDADIVVWKSLLA 578
+ ++V W S+++
Sbjct: 500 IG-GQELVSWNSIIS 513
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 201/591 (34%), Positives = 312/591 (52%), Gaps = 44/591 (7%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
N+R + +A L+ S + + +H I++S Q D L N ++N+ K +++A
Sbjct: 44 NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNA 103
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSG 148
R+ FDKMP +N+++W++M++ SQ +A+ +++ + +SG P +F S+I+AC+
Sbjct: 104 RVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQ 163
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
LG V G QLH V++S + +LI Y+K I +AR VF ++ K +W ++
Sbjct: 164 LGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTI 223
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------- 249
IA ++K G +L F +M P+ ++ SV SACS
Sbjct: 224 IAGYTKCGRSAVSLELFAQMRETNVV-PDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRG 282
Query: 250 ---------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
R LF+++ ++ SW +I+G +S EAM LF
Sbjct: 283 TEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFG 342
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
EM PDG S+L +C R L QG QVH+Y IK +S+ V N ++ MYAK +
Sbjct: 343 EMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSN 402
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+L +A VF + + + +S+N++I + E LF M KP+ TF ++
Sbjct: 403 LLIDAKKVFDVMAEQ-NVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALI 461
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
A + +ASL Q H + K GL F FV N L+D+Y KCGS+ ARK+FN DVV
Sbjct: 462 TAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVV 521
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
W+S+I +AQ G +EAL +F M G+ PN VT V VL+ACSH G VE+GL+ + M
Sbjct: 522 CWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM 581
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+GI P EH +CVV LL R+G + EA++FI +M + +VW+SLL++
Sbjct: 582 PG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSA 631
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 146/516 (28%), Positives = 253/516 (49%), Gaps = 55/516 (10%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VS +Q EAL+ + Q + A +I AC+ L ++ G ++H ++ S
Sbjct: 122 VSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSG 181
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
DV + +++ Y K G++E+AR+ FD++ ++ V+WT +IAG ++ + +++L+
Sbjct: 182 FDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFA 241
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
QM ++ V+P ++ S++ ACS L + G+Q+HA+V++ + N LI YTK +
Sbjct: 242 QMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCN 301
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
R+ R +F + K++ SW +MI+ + + ++ EA+ F EM G ++P+ F SV
Sbjct: 302 RVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLG-WKPDGFACTSVL 360
Query: 246 SAC-------------------------------------SNF---ARILFNEIDSPDLA 265
++C SN A+ +F+ + ++
Sbjct: 361 TSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVI 420
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
S+NA+I G +S +EA+ LF EMR R P+ T +L+ A +L G Q H+ +
Sbjct: 421 SYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQL 480
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
+KMG D V NA++ MYAKC + A +F D V WNS+I+ QH +AEE
Sbjct: 481 VKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNS-SIWRDVVCWNSMISTHAQHGEAEEA 539
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
+F M+ I+P+++TF V+ AC+ +E L+ + + G + G
Sbjct: 540 LGMFREMMKEGIQPNYVTFVAVLSACSHAGRVE--DGLNHFNSMPGFG----IKPGTEHY 593
Query: 446 YIKCGSLGSARKLF---NFMEN----PDVVSWSSLI 474
LG + KLF F+E P + W SL+
Sbjct: 594 ACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLL 629
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 190/394 (48%), Gaps = 42/394 (10%)
Query: 24 FSQ-NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGK 82
F+Q TN+ + ++SACS L L+ G+++H ++L + DV + N +++ Y K
Sbjct: 240 FAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTK 299
Query: 83 CGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI 142
C ++ R FD+M +N++SWT MI+G QN + +A+KL+ +M + G P F S+
Sbjct: 300 CNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSV 359
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
+ +C ++ GRQ+HA+ IK+ S +N LI MY K + ++DA+ VF +A ++V
Sbjct: 360 LTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNV 419
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------- 251
S+ +MI +S EAL F+EM +PNEF F ++ +A SN
Sbjct: 420 ISYNAMIEGYSSQEKLSEALELFHEMRVR-LQKPNEFTFAALITAASNLASLRHGQQFHN 478
Query: 252 -----------------------------ARILFNEIDSPDLASWNALIAGVASHSNANE 282
AR +FN D+ WN++I+ A H A E
Sbjct: 479 QLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEE 538
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
A+ +F EM + P+ +T ++L AC + G+ + + G +++
Sbjct: 539 ALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACVVS 598
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+ + L A +++ ++ W S+++AC
Sbjct: 599 LLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSAC 632
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 204/618 (33%), Positives = 322/618 (52%), Gaps = 44/618 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S +Q +A ++ QN I + TY +++AC S L+ G+K+H I+
Sbjct: 97 NSLISCYAQQGFKKKAFQLFEEMQNAGFIPNK-ITYISILTACYSPAELENGKKIHSQII 155
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ Q D +QN +L+MYGKCG L AR F + R+VVS+ M+ +Q + +
Sbjct: 156 KAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLG 215
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ QM G+ P + T+ +++ A + + G+++H ++ S + AL+ M
Sbjct: 216 LFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCV 275
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
+ + A+ F GIA +DV + ++IAA ++ G+ +EA + M G N +
Sbjct: 276 RCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVAL-NRTTYL 334
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
S+ +ACS AR LF +
Sbjct: 335 SILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKR 394
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
DL SWNA+IAG A + EAM L+ +M+ + P +T LL AC G +H
Sbjct: 395 DLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIH 454
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
I++ G SN + NA++ MY +C L A VF E + D +SWNS+IA QH
Sbjct: 455 EDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVF-EGTQARDVISWNSMIAGHAQHGSY 513
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
E ++LF M +++PD+ITF V+ C +LE+ Q+H IT++GL DV + N L
Sbjct: 514 ETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNAL 573
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV-SPN 501
+++YI+CGSL AR +F+ +++ DV+SW+++I G A G +A++LF +M++ G P+
Sbjct: 574 INMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPD 633
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
T +L+AC+H GLV EG ++ ME+EYG++PT EH C+V LL RA EAE I
Sbjct: 634 GSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLI 693
Query: 562 NQMACDADIVVWKSLLAS 579
NQM D VW++LL +
Sbjct: 694 NQMPFPPDAAVWETLLGA 711
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 171/611 (27%), Positives = 309/611 (50%), Gaps = 51/611 (8%)
Query: 14 LYNEALVAYDFSQNNTNIRIRPS-----TYAGLISACSSLRSLQLGRKVHDHILLSKCQP 68
+ NE D + + RP+ TY L+ C+ R L +++H ++ + P
Sbjct: 1 MRNERHCGPDREDVSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGP 60
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D+ L N ++NMY KC S+ DA F +MP+R+V+SW ++I+ +Q + A +L+ +M
Sbjct: 61 DIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ 120
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
+G +P + T+ SI+ AC + G+++H+ +IK+ + QN+L++MY K +
Sbjct: 121 NAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLP 180
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
AR VF+GI+ +DV S+ +M+ +++ Y E L F +M G P++ + ++ A
Sbjct: 181 RARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEG-ISPDKVTYINLLDAF 239
Query: 249 S----------------------------------------NFARILFNEIDSPDLASWN 268
+ + A+ F I D+ +N
Sbjct: 240 TTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYN 299
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
ALIA +A H + EA + MR + + T S+L AC L G +HS+I +
Sbjct: 300 ALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED 359
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
G S+V + NA+++MYA+C L A +F + K D +SWN+IIA + E RL
Sbjct: 360 GHSSDVQIGNALISMYARCGDLPKARELFYTMPKR-DLISWNAIIAGYARREDRGEAMRL 418
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
+ +M + +KP +TF ++ ACA ++ +H I ++G+ + + N LM++Y +
Sbjct: 419 YKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRR 478
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
CGSL A+ +F + DV+SW+S+I G+AQ G + A KLF M++ + P+ +T V
Sbjct: 479 CGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASV 538
Query: 509 LTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
L+ C + +E G ++ RI E+ G+ + ++++ R G + +A + + +
Sbjct: 539 LSGCKNPEALELGKQIHGRITES--GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ-H 595
Query: 568 ADIVVWKSLLA 578
D++ W +++
Sbjct: 596 RDVMSWTAMIG 606
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 155/287 (54%), Gaps = 3/287 (1%)
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
R D T +LL C + L + ++H+ +++ G ++ + N ++ MY KC + +
Sbjct: 21 RPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLD 80
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A VFKE+ + D +SWNS+I+ Q ++ F+LF M + P+ IT+ ++ AC
Sbjct: 81 AHQVFKEMPRR-DVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACY 139
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
A LE ++H I K G D V N L+ +Y KCG L AR++F + DVVS+++
Sbjct: 140 SPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNT 199
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
++ YAQ E L LF +M S G+SP+ VT + +L A + +++EG ++++ E
Sbjct: 200 MLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE- 258
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G+ + +V + R G V A+ +A D D+VV+ +L+A+
Sbjct: 259 GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIA-DRDVVVYNALIAA 304
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 194/583 (33%), Positives = 312/583 (53%), Gaps = 42/583 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T+A ++ ACS L LG +VH I+ DVV + +L+MY KC L+D+ F +
Sbjct: 177 TTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSE 236
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+P +N V W+A+IAGC QN + ++L+ +M + G+ Q + S+ ++C+GL ++ +G
Sbjct: 237 IPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVG 296
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
QLHAH +K + GS + A + MY K + DA+ +F+ + + + + ++I +
Sbjct: 297 TQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRN 356
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
EAL F +L G NE FSAC++
Sbjct: 357 EKGFEALQFFQLLLKSG-LGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICV 415
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A +F+E++ D SWNA+IA + N E ++LF+ M +
Sbjct: 416 ANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRM 475
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD T S+L AC + L GM++H+ IIK G + V A++ MY KC ++ A
Sbjct: 476 EPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKK 535
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+ + + VSWN+IIA +E+ F ML +KPD+ T+ V+ ACA +A
Sbjct: 536 IHDRIEQQT-MVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLA 594
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
S+ + Q+H I K L DV++ + L+D+Y KCG++ + +F N D V+W+++I
Sbjct: 595 SVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMIC 654
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
GYAQ G G+EAL F RM+ V PN T V +L AC+H+G +++GLH + M EYG+
Sbjct: 655 GYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLE 714
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
P EH SC++D++ R+G + EA I +M +AD V+W++LL+
Sbjct: 715 PQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLS 757
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 179/647 (27%), Positives = 299/647 (46%), Gaps = 92/647 (14%)
Query: 14 LYNEALVAYDF------SQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQ 67
LYN+ L + F QN T + + T++ +I CS SL+ G++ H +++S
Sbjct: 16 LYNKTLRIFTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFI 75
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKM------------------------------- 96
PDV + N ++ MY +C L A F+KM
Sbjct: 76 PDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDT 135
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGSVCLG 155
P+R+VVSW +M++G QN + +I +++ M +S V Q TF ++KACS L LG
Sbjct: 136 PKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLG 195
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
Q+H +++ ++ +AL+ MY K R+ D+ +FS I K+ W ++IA +
Sbjct: 196 IQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQN 255
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
+ L F EM G ++ I+ SVF +C+
Sbjct: 256 DEHILGLELFKEMQKVGI-GVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITV 314
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A+ +FN + L +NA+I G + EA+ F + L
Sbjct: 315 GTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGL 374
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
+ +++ AC G Q+HS +K SN+ V N+IL MY KC L A
Sbjct: 375 GFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACC 434
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F E+ + D+VSWN++IAA Q+ EE LF+ ML +++PD T+ V+ AC+
Sbjct: 435 MFDEMERR-DAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQ 493
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+L ++H I K+GL D FV L+D+Y KCG + A+K+ + +E +VSW+++I
Sbjct: 494 ALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIA 553
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
G+ ++A F M + V P+ T VL AC+++ V G ++ II
Sbjct: 554 GFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHG------QII 607
Query: 536 PTREH-----CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
H S +VD+ ++ G + ++ + + A + D V W +++
Sbjct: 608 KLELHSDVYITSTLVDMYSKCGNMQDSA-LVFEKAPNKDFVTWNAMI 653
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 144/492 (29%), Positives = 243/492 (49%), Gaps = 48/492 (9%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
I + S YA + +C+ L +L++G ++H H L D+ + L+MY KCGSL
Sbjct: 269 QKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSL 328
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
DA+ F+ +P+ ++ + A+I GC +N + +A++ + +L+SG+ + + AC
Sbjct: 329 ADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSAC 388
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
+ + GRQLH+ +KS S++ N+++ MY K + + +A +F + R+D SW
Sbjct: 389 ASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWN 448
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------------- 250
++IAA + G E E L F ML +P++F +GSV ACS+
Sbjct: 449 AVIAAHEQNGNEEETLNLFASMLRL-RMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIK 507
Query: 251 ------------------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
A+ + + I+ + SWNA+IAG ++ +A S
Sbjct: 508 SGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSF 567
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
F EM + PD T +L AC ++ G Q+H IIK+ S+V + + ++ MY+K
Sbjct: 568 FYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSK 627
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
C + ++ LVF E N D V+WN++I QH EE F RM ++P+H TF
Sbjct: 628 CGNMQDSALVF-EKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVS 686
Query: 407 VMGACAKMASLEMVTQLHCY---ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
++ ACA M ++ LH + +T+ GL + + ++DI + G + A KL M
Sbjct: 687 ILRACAHMGFID--KGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMP 744
Query: 464 -NPDVVSWSSLI 474
D V W +L+
Sbjct: 745 FEADAVIWRTLL 756
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 200/405 (49%), Gaps = 44/405 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+ +G SAC+S++ GR++H + S + ++ + N IL+MYGKC +L +A FD+M
Sbjct: 380 SLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEM 439
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R+ VSW A+IA QN E + + L+ ML+ + P QFT+GS++KACS ++ G
Sbjct: 440 ERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGM 499
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H +IKS G ALI MY K I +A+ + I ++ + SW ++IA F+ L
Sbjct: 500 EIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLK 559
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
+ +A F EML + +P+ F + V AC+N A +
Sbjct: 560 HSEDAHSFFYEMLKM-SVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYIT 618
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+F + + D +WNA+I G A H EA+ F M+ +
Sbjct: 619 STLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVR 678
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ T S+L AC + +G+ ++ + + G + + + ++ + + + AL
Sbjct: 679 PNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALK 738
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+ +E+ AD+V W ++++ C H E + + +L Q++P+
Sbjct: 739 LIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAIL--QLEPE 781
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 149/291 (51%), Gaps = 16/291 (5%)
Query: 31 IRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
+R+ P TY ++ ACSS ++L G ++H+ I+ S D + +++MY KCG +E+
Sbjct: 473 LRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEE 532
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A+ D++ Q+ +VSW A+IAG + DA + +ML+ V P FT+ ++ AC+
Sbjct: 533 AKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACAN 592
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
L SV LG+Q+H +IK E S + + L+ MY+K + D+ VF KD +W +M
Sbjct: 593 LASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAM 652
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS-- 261
I +++ G EAL +F M +PN F S+ AC++ I FN + +
Sbjct: 653 ICGYAQHGLGEEALGYFERMQLENV-RPNHATFVSILRACAHMGFIDKGLHYFNAMLTEY 711
Query: 262 ---PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
P + ++ +I + +EA+ L EM D + +LL C
Sbjct: 712 GLEPQIEHYSCMIDIIGRSGRISEALKLIQEM---PFEADAVIWRTLLSIC 759
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 372 IIAACLQHNQAEELFRL--FSRMLASQIK-PDHI-TFNDVMGACAKMASLEMVTQLHCYI 427
+IA+ + +N+ +F S + +Q K P I TF+ ++ C+ SL+ Q H +
Sbjct: 10 LIASRILYNKTLRIFTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARM 69
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
+G DV++ N LM +Y++C L A K+F M DV+S++++I GYA G
Sbjct: 70 IVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAG 123
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 200/604 (33%), Positives = 326/604 (53%), Gaps = 43/604 (7%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
EAL+ + Q + A +I AC+ L ++ G ++H ++ S DV +
Sbjct: 18 EEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTS 77
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
+++ Y K G +E AR+ FD++ ++ V+WT +IAG ++ + +++L+ QM ++ V+P
Sbjct: 78 LIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPD 137
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
++ S++ ACS L + G+Q+HA+V++ + N LI YTK +R+ R +F
Sbjct: 138 RYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 197
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---- 251
+ K++ SW +MI+ + + ++ EA+ F EM G ++P+ F SV ++C +
Sbjct: 198 QMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLG-WKPDGFACTSVLTSCGSLEALE 256
Query: 252 ------------------------------------ARILFNEIDSPDLASWNALIAGVA 275
A+ +F+ + ++ S+NA+I G +
Sbjct: 257 QGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYS 316
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
S +EA+ LF EMR R P LT SLL L Q+H IIK G ++
Sbjct: 317 SQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLF 376
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
+A++ +Y+KCS + +A VF+E+ + D V WN++ QH + EE +L+S + S
Sbjct: 377 AGSALIDVYSKCSYVKDARHVFEEMNEK-DIVVWNAMFFGYTQHLENEEALKLYSTLQFS 435
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA 455
+ KP+ TF ++ A + +ASL Q H + K GL F FV N L+D+Y KCGS+ A
Sbjct: 436 RQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEA 495
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
RK+FN DVV W+S+I +AQ G +EAL +F M G+ PN VT V VL+ACSH
Sbjct: 496 RKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHA 555
Query: 516 GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
G VE+GL+ + M +GI P EH +CVV LL R+G + EA++FI +M + +VW+S
Sbjct: 556 GXVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRS 614
Query: 576 LLAS 579
LL++
Sbjct: 615 LLSA 618
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/508 (28%), Positives = 244/508 (48%), Gaps = 46/508 (9%)
Query: 113 QNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL 171
+ Y E +A+ +++ + +SG P +F S+I+AC+ LG V G QLH V++S +
Sbjct: 14 EGYSE-EALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDV 72
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH 231
+LI Y+K I AR VF + K +W ++IA ++K G +L F +M
Sbjct: 73 YVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRET 132
Query: 232 GAYQPNEFIFGSVFSACS----------------------------------------NF 251
P+ ++ SV SACS
Sbjct: 133 NVV-PDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKA 191
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
R LF+++ ++ SW +I+G +S EAM LF EM PDG S+L +C
Sbjct: 192 GRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGS 251
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
L QG QVH+Y IK +SN V N ++ MYAK ++L +A VF + + + +S+N+
Sbjct: 252 LEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQ-NVISYNA 310
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+I + E LF M P +TF ++G A + +LE+ Q+H I K G
Sbjct: 311 MIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXG 370
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
++ D+F + L+D+Y KC + AR +F M D+V W+++ GY Q +EALKL++
Sbjct: 371 VSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYS 430
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
++ PN T ++TA S++ + G + + + G+ + +VD+ A+
Sbjct: 431 TLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLV-KMGLDFCPFVTNALVDMYAKC 489
Query: 552 GCVHEAEDFINQMACDADIVVWKSLLAS 579
G + EA N + D+V W S++++
Sbjct: 490 GSIEEARKMFNS-SIWRDVVCWNSMIST 516
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 194/596 (32%), Positives = 322/596 (54%), Gaps = 22/596 (3%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S+L + +AL Y + + T A ++SAC +L ++ GR+ H +
Sbjct: 106 NTLISALTRNGFEQKALGVY-YRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISI 164
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ + N +L MY KC + DA F +P+ N VS+TAM+ G + + Q N+A +
Sbjct: 165 KIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFR 224
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACS--GLGSVCL------------GRQLHAHVIKSEHG 168
L+ ML++ + + S++ CS G G L G+Q+H IK
Sbjct: 225 LFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFE 284
Query: 169 SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
S L N+L+ MY K + A +F + V SW MIA + + +A+ + M
Sbjct: 285 SDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRM 344
Query: 229 LHHGAYQPNEFIFGSVFSACSN-----FARILFNEIDSPDLASWNALIAGVASHSNANEA 283
+HG ++P+E + ++ AC R +F+ + SP L+SWN +++G + + N EA
Sbjct: 345 QYHG-FEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEA 403
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
+ LF EM+ R + PD T+ +L + G + L G QVH+ K F +++ + + ++ M
Sbjct: 404 VKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGM 463
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
Y+KC + A +F + + D V WNS++A ++ +E F F +M + P +
Sbjct: 464 YSKCGKVEMAKRIFDRIAE-LDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFS 522
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
+ V+ CAK++SL Q+H I + G D FV + L+D+Y KCG + +AR +F+ M
Sbjct: 523 YATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMML 582
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
+ V+W+ +I GYAQ GCGDEA+ L+ M G P+ +T V VLTACSH GLV+ G+
Sbjct: 583 GKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIK 642
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++ M+ E+G+ P +H +C++D L RAG +HEAE I++M C D ++W+ LL+S
Sbjct: 643 IFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSS 698
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 150/576 (26%), Positives = 253/576 (43%), Gaps = 120/576 (20%)
Query: 36 STY-AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS--------- 85
+TY A L+ C ++ G+ +H H+L S+ D L N ++ Y KC +
Sbjct: 5 TTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFD 64
Query: 86 ----------------------LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
LEDA + F +MP+RN+VSW +I+ ++N E A+ +
Sbjct: 65 QMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGV 124
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
Y +M + G +P FT S++ AC L V GR+ H IK +++ NAL+ MY K
Sbjct: 125 YYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAK 184
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
I DA F + + S+ +M+ + EA F ML +
Sbjct: 185 CRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRN------------ 232
Query: 244 VFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
RI +DS L+S + GV S E F ++L VH
Sbjct: 233 ---------RI---HVDSVSLSS----VLGVCSRGGCGE----FGLHDSNDVLSS--DVH 270
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
G QVH IK GF+S++ + N++L MYAK + +A ++F +
Sbjct: 271 --------------GQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNM-PE 315
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
VSWN +IA Q +Q+ + RM +PD IT+ +++ AC
Sbjct: 316 VSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVAC------------ 363
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
IK G + + R++F+ M +P + SW++++ GY+Q
Sbjct: 364 -----------------------IKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENH 400
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH-CS 542
EA+KLF M+ V P+ TL +L++ + + L+E G ++ + ++ + T + S
Sbjct: 401 KEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAV--SQKAVFRTDIYLAS 458
Query: 543 CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++ + ++ G V A+ +++A + DIV W S++A
Sbjct: 459 GLIGMYSKCGKVEMAKRIFDRIA-ELDIVCWNSMMA 493
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 205/585 (35%), Positives = 313/585 (53%), Gaps = 45/585 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY +++A +S +L+ ++VH H + + D+ + N +++MY K GS++DAR+ FD M
Sbjct: 133 TYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGM 192
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC--SGLGSVCL 154
+R++ SWT MI G +Q+ + +A L++QM + G +P T+ SI+ A + G++
Sbjct: 193 VERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEW 252
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
+++H H K+ S L NALI MY K I DAR VF G+ +DV SW +MI ++
Sbjct: 253 VKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQ 312
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIF--------------------------------- 241
G EA F +M G + P+ +
Sbjct: 313 NGCGHEAFTIFLKMQQEG-FVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLR 371
Query: 242 -GSVFS----ACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
GS F C + A+++F+++ ++ +WNA+I GVA EA+SLF +MR
Sbjct: 372 VGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREG 431
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
PD T ++L A +G L +VHSY I G ++ V NA++ MYAKC A
Sbjct: 432 FFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAK 490
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
VF ++ + + +W +I+ QH E F LF +ML I PD T+ ++ ACA
Sbjct: 491 QVFDDMVER-NVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACAST 549
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+LE V ++H + GL D+ V N L+ +Y KCGS+ AR++F+ M DV SW+ +I
Sbjct: 550 GALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMI 609
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
G AQ G G +AL LF +M+ G PN + V VL+ACSH GLV+EG + + +YGI
Sbjct: 610 GGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGI 669
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
PT EH +C+VDLL RAG + EA+ FI M + W +LL +
Sbjct: 670 EPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGA 714
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 177/584 (30%), Positives = 297/584 (50%), Gaps = 47/584 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY ++ AC S SL+ G+K+H HI+ S Q DV ++ ++NMY KCGS++DA++ FDKM
Sbjct: 32 TYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKM 91
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+RNV+SWT MI G + + +A ++QM + G +P +T+ SI+ A + G++ +
Sbjct: 92 VERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVK 151
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H+H + + L NAL+ MY K I DAR VF G+ +D+ SW MI ++ G
Sbjct: 152 EVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHG 211
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------------- 249
EA F +M G PN + S+ +A +
Sbjct: 212 RGQEAFSLFLQM-ERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLR 270
Query: 250 ---------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+ AR++F+ + D+ SWNA+I G+A + +EA ++F +M+
Sbjct: 271 VGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEG 330
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+PD T SLL + +VH + +++G S++ V +A + MY +C + +A
Sbjct: 331 FVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQ 390
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
L+F +L + +WN++I Q E LF +M PD TF +++ A
Sbjct: 391 LIFDKLAVR-NVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGE 449
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+LE V ++H Y GL D+ V N L+ +Y KCG+ A+++F+ M +V +W+ +I
Sbjct: 450 EALEWVKEVHSYAIDAGLV-DLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMI 508
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
G AQ GCG EA LF +M G+ P+ T V +L+AC+ G +E ++ N G+
Sbjct: 509 SGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNA-GL 567
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ + +V + A+ G V +A + M + D+ W ++
Sbjct: 568 VSDLRVGNALVHMYAKCGSVDDARRVFDDM-LERDVYSWTVMIG 610
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 152/519 (29%), Positives = 256/519 (49%), Gaps = 57/519 (10%)
Query: 107 MIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE 166
MI G ++ DA+K+Y QM + G P + T+ SI+KAC S+ G+++HAH+I+S
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
S + + AL+ MY K I DA+ +F + ++V SW MI + G EA F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 227 EMLHHGAYQPNEFIFGSVFSACS------------------------------------- 249
+M G + PN + + S+ +A +
Sbjct: 121 QMQREG-FIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 179
Query: 250 ---NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
+ AR++F+ + D+ SW +I G+A H EA SLF +M LP+ T S+L
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239
Query: 307 CA----CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
A G L + +VH + K GF S++ V NA++ MYAKC + +A LVF +
Sbjct: 240 NASAITSTGALEWVK--EVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMC- 296
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
+ D +SWN++I Q+ E F +F +M PD T+ ++ + E V +
Sbjct: 297 DRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKE 356
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGC 482
+H + + GL D+ V + + +YI+CGS+ A+ +F+ + +V +W+++I G AQ C
Sbjct: 357 VHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKC 416
Query: 483 GDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN---EYGIIPTRE 539
G EAL LF +MR G P+ T V +L+A +VG EE L + + + + G++ R
Sbjct: 417 GREALSLFLQMRREGFFPDATTFVNILSA--NVG--EEALEWVKEVHSYAIDAGLVDLRV 472
Query: 540 HCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +V + A+ G A+ + M + ++ W +++
Sbjct: 473 -GNALVHMYAKCGNTMYAKQVFDDM-VERNVTTWTVMIS 509
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 177/389 (45%), Gaps = 43/389 (11%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+TY L++ S + + ++VH H + D+ + + ++MY +CGS++DA++ FDK
Sbjct: 336 TTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDK 395
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ RNV +W AMI G +Q +A+ L++QM + G P TF +I+ A G ++
Sbjct: 396 LAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWV 455
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+++H++ I + L NAL+ MY K + A+ VF + ++VT+W MI+ ++
Sbjct: 456 KEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQH 514
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G EA F +ML G P+ + S+ SAC++
Sbjct: 515 GCGHEAFSLFLQMLREGIV-PDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRV 573
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR +F+++ D+ SW +I G+A H +A+ LF +M+
Sbjct: 574 GNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGF 633
Query: 296 LPDGLTVHSLLCACIGRLTLYQG-MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
P+G + ++L AC + +G Q S G + + ++ + + L A
Sbjct: 634 KPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAK 693
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ W +++ AC+ + E
Sbjct: 694 HFILNMPIEPGDAPWGALLGACVTYGNLE 722
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 138/248 (55%), Gaps = 3/248 (1%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + + +Q EAL + +T+ ++SA +L+ ++VH + +
Sbjct: 405 NAMIGGVAQQKCGREALSLF-LQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAI 463
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D+ + N +++MY KCG+ A+ FD M +RNV +WT MI+G +Q+ ++A
Sbjct: 464 DAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFS 522
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L++QML+ G++P T+ SI+ AC+ G++ +++H+H + + S L NAL+ MY
Sbjct: 523 LFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYA 582
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + DAR VF + +DV SW MI ++ G L+AL F +M G ++PN + F
Sbjct: 583 KCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEG-FKPNGYSFV 641
Query: 243 SVFSACSN 250
+V SACS+
Sbjct: 642 AVLSACSH 649
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 201/589 (34%), Positives = 318/589 (53%), Gaps = 42/589 (7%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++ T+ ++ ACS R L +GRKVH +++ + D + N ++ MY KCG L+D+R
Sbjct: 78 VKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSR 137
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F + +RNVVSW A+ + Q+ +A+ L+ +M++SG+MP +F+ I+ AC+GL
Sbjct: 138 RLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQ 197
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
LGR++H ++K + NAL+ MY+K I A VF IA DV SW ++IA
Sbjct: 198 EGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIA 257
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------- 249
AL +EM G +PN F S AC+
Sbjct: 258 GCVLHDCNDLALMLLDEMKGSGT-RPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAH 316
Query: 250 -------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ AR ++ + D+ +WNALI+G + + +A+SLFS+M
Sbjct: 317 SDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKM 376
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
++ + T+ ++L + + Q+H+ IK G S+ V N++L Y KC+ +
Sbjct: 377 FSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHI 436
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
A +F+E D V++ S+I A Q+ EE +L+ +M + IKPD + ++ A
Sbjct: 437 DEASKIFEERTWE-DLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNA 495
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
CA +++ E QLH + K G D+F N L+++Y KCGS+ A + F+ + N +VSW
Sbjct: 496 CANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSW 555
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
S++I GYAQ G G EAL+LF +M GV PN +TLV VL AC+H GLV EG + ME
Sbjct: 556 SAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEV 615
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+GI PT+EH +C++DLL R+G ++EA + +N + +AD VW +LL +
Sbjct: 616 MFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGA 664
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 156/565 (27%), Positives = 286/565 (50%), Gaps = 48/565 (8%)
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
++H H++ D L+NH++ +Y KC AR D+ + +VVSW+++++G QN
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+A+ ++ +M GV +FTF S++KACS + +GR++H + + S N
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
L+ MY K + D+R +F GI ++V SW ++ + + + EA+ F EM+ G
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSG-IM 180
Query: 236 PNEFIFGSVFSACSNF----------------------------------------ARIL 255
PNEF + +AC+ A +
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F +I PD+ SWNA+IAG H + A+ L EM+ P+ T+ S L AC
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
G Q+HS +IKM S++ ++ MY+KC ++ +A + + K D ++WN++I+
Sbjct: 301 ELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKK-DIIAWNALISG 359
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
Q + LFS+M + I + T + V+ + A + ++++ Q+H K+G+ D
Sbjct: 360 YSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSD 419
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
+V+N L+D Y KC + A K+F D+V+++S+I Y+Q+G G+EALKL+ +M+
Sbjct: 420 FYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQD 479
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
+ P+ +L AC+++ E+G LH++ I ++G + + +V++ A+ G
Sbjct: 480 ADIKPDPFICSSLLNACANLSAYEQGKQLHVHAI---KFGFMCDIFASNSLVNMYAKCGS 536
Query: 554 VHEAEDFINQMACDADIVVWKSLLA 578
+ +A+ +++ + IV W +++
Sbjct: 537 IEDADRAFSEIP-NRGIVSWSAMIG 560
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 137/260 (52%), Gaps = 3/260 (1%)
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
M++H+++IK GF + + N ++T+Y+KC A + E D VSW+S+++ +Q
Sbjct: 1 MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDE-SSELDVVSWSSLLSGYVQ 59
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+ EE +F+ M +K + TF V+ AC+ L M ++H TG D FV
Sbjct: 60 NGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFV 119
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
N L+ +Y KCG L +R+LF + +VVSW++L Y Q EA+ LF M G+
Sbjct: 120 ANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGI 179
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAE 558
PN ++ +L AC+ + + G ++ +M + G+ + + +VD+ ++AG + A
Sbjct: 180 MPNEFSISIILNACAGLQEGDLGRKIHGLML-KMGLDLDQFSANALVDMYSKAGEIEGAV 238
Query: 559 DFINQMACDADIVVWKSLLA 578
+A D+V W +++A
Sbjct: 239 AVFQDIA-HPDVVSWNAIIA 257
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 207/618 (33%), Positives = 332/618 (53%), Gaps = 51/618 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + LC Q +A+ + S I + Y L+ C R+ G +V++ +
Sbjct: 66 NLELRELCLQGNLEQAMKRLE-SMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVS 124
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
SK V L N +L+M+ + G+L DA F KM +R+V SW ++ G ++ ++A+
Sbjct: 125 SSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALN 184
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
LY +ML + + P +TF S++K C+G+ + G+++HAHVI+ S + NALI MY
Sbjct: 185 LYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYV 244
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I +AR +F + ++D SW +MI+ + + G LE L F+ M+ + P+
Sbjct: 245 KCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFS-MMRELSVDPDLITMT 303
Query: 243 SVFSAC------------------SNF----------------------ARILFNEIDSP 262
+V SAC S F A +F+ ++S
Sbjct: 304 TVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESK 363
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL--CACIGRLTLYQGMQ 320
D+ SW A+IA + SH +A+ + M +LPD +T+ S+L CACIG L L G++
Sbjct: 364 DVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDL--GIR 421
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL-GKNADSVSWNSIIAACLQH 379
+H IK G S+V V N+++ MY+KC + NAL VF+ + GKN VSW S+I +
Sbjct: 422 LHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNV--VSWTSLILGLRIN 479
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
N++ E LF R + +KP+ +T V+ ACA++ +L ++H + +TG+ FD F+
Sbjct: 480 NRSFEAL-LFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLP 538
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
N ++D+Y++CG A FN + DV +W+ L+ GYAQ G A++LF +M L +
Sbjct: 539 NAILDMYVRCGRKVPALNQFN-SQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIH 597
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
P+ +T + +L ACS G+V EGL + IM+N+Y + P +H +CVVD+L RAG + +A D
Sbjct: 598 PDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYD 657
Query: 560 FINQMACDADIVVWKSLL 577
FI M D +W +LL
Sbjct: 658 FIQDMPIRPDAAIWGALL 675
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 162/305 (53%), Gaps = 7/305 (2%)
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
N +AM M + + + +LL C R +G +V+ + V +
Sbjct: 75 QGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRL 134
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
NA+L+M+ + L +A VF ++ + D SWN ++ + +E L+ RML ++
Sbjct: 135 GNALLSMFVRFGNLLDAWYVFGKMSER-DVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
I+P+ TF V+ CA ++ + ++H ++ + G DV V N L+ +Y+KCG + +AR
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNAR 253
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
LF+ M D +SW+++I GY + G G E L+LF+ MR L V P+L+T+ V +AC +
Sbjct: 254 MLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLD 313
Query: 517 --LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
+ G+H Y ++++E+G + + ++ + + G + EAE ++M D+V W
Sbjct: 314 NERLGRGVHGY-VVKSEFGGDISMNN--SLIQMYSSLGRLEEAETVFSRME-SKDVVSWT 369
Query: 575 SLLAS 579
+++AS
Sbjct: 370 AMIAS 374
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 101/191 (52%), Gaps = 5/191 (2%)
Query: 24 FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
F Q +++ T ++SAC+ + +L G+++H H L + D L N IL+MY +C
Sbjct: 489 FRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRC 548
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G A F+ +++V +W ++ G +Q Q A++L+ +ML+ + P + TF S++
Sbjct: 549 GRKVPALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLL 607
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHG--SHLIAQNALIAMYTKFDRILDARNVFSGIA-RK 200
ACS G V G + + +++K+++ +L ++ + + ++ DA + + R
Sbjct: 608 CACSKSGMVTEGLE-YFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRP 666
Query: 201 DVTSWGSMIAA 211
D WG+++ A
Sbjct: 667 DAAIWGALLNA 677
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 207/618 (33%), Positives = 332/618 (53%), Gaps = 51/618 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + LC Q +A+ + S I + Y L+ C R+ G +V++ +
Sbjct: 66 NLELRELCLQGNLEQAMKRLE-SMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVS 124
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
SK V L N +L+M+ + G+L DA F KM +R+V SW ++ G ++ ++A+
Sbjct: 125 SSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALN 184
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
LY +ML + + P +TF S++K C+G+ + G+++HAHVI+ S + NALI MY
Sbjct: 185 LYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYV 244
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I +AR +F + ++D SW +MI+ + + G LE L F+ M+ + P+
Sbjct: 245 KCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFS-MMRELSVDPDLITMT 303
Query: 243 SVFSAC------------------SNF----------------------ARILFNEIDSP 262
+V SAC S F A +F+ ++S
Sbjct: 304 TVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESK 363
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL--CACIGRLTLYQGMQ 320
D+ SW A+IA + SH +A+ + M +LPD +T+ S+L CACIG L L G++
Sbjct: 364 DVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDL--GIR 421
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL-GKNADSVSWNSIIAACLQH 379
+H IK G S+V V N+++ MY+KC + NAL VF+ + GKN VSW S+I +
Sbjct: 422 LHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNV--VSWTSLILGLRIN 479
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
N++ E LF R + +KP+ +T V+ ACA++ +L ++H + +TG+ FD F+
Sbjct: 480 NRSFEAL-LFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLP 538
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
N ++D+Y++CG A FN + DV +W+ L+ GYAQ G A++LF +M L +
Sbjct: 539 NAILDMYVRCGRKVPALNQFN-SQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIH 597
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
P+ +T + +L ACS G+V EGL + IM+N+Y + P +H +CVVD+L RAG + +A D
Sbjct: 598 PDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYD 657
Query: 560 FINQMACDADIVVWKSLL 577
FI M D +W +LL
Sbjct: 658 FIQDMPIRPDAAIWGALL 675
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 162/305 (53%), Gaps = 7/305 (2%)
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
N +AM M + + + +LL C R +G +V+ + V +
Sbjct: 75 QGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRL 134
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
NA+L+M+ + L +A VF ++ + D SWN ++ + +E L+ RML ++
Sbjct: 135 GNALLSMFVRFGNLLDAWYVFGKMSER-DVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
I+P+ TF V+ CA ++ + ++H ++ + G DV V N L+ +Y+KCG + +AR
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNAR 253
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
LF+ M D +SW+++I GY + G G E L+LF+ MR L V P+L+T+ V +AC +
Sbjct: 254 MLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLD 313
Query: 517 --LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
+ G+H Y ++++E+G + + ++ + + G + EAE ++M D+V W
Sbjct: 314 NERLGRGVHGY-VVKSEFGGDISMNN--SLIQMYSSLGRLEEAETVFSRME-SKDVVSWT 369
Query: 575 SLLAS 579
+++AS
Sbjct: 370 AMIAS 374
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 101/191 (52%), Gaps = 5/191 (2%)
Query: 24 FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
F Q +++ T ++SAC+ + +L G+++H H L + D L N IL+MY +C
Sbjct: 489 FRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRC 548
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G A F+ +++V +W ++ G +Q Q A++L+ +ML+ + P + TF S++
Sbjct: 549 GRKVPALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLL 607
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHG--SHLIAQNALIAMYTKFDRILDARNVFSGIA-RK 200
ACS G V G + + +++K+++ +L ++ + + ++ DA + + R
Sbjct: 608 CACSKSGMVTEGLE-YFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRP 666
Query: 201 DVTSWGSMIAA 211
D WG+++ A
Sbjct: 667 DAAIWGALLNA 677
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 208/590 (35%), Positives = 306/590 (51%), Gaps = 49/590 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY L+ + SL G+ H H++ + +P + L N++L MY KCG + A+ FD+M
Sbjct: 21 TYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRM 80
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+RNVVSW ++I+G +Q ++ + L+ + S + +FTF + + C + LGR
Sbjct: 81 PKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGR 140
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+HA + S G ++ N+LI MY K RI AR VF D SW S+IA + ++G
Sbjct: 141 LIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIG 200
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-SNF------------------------ 251
E L +ML HG N + GS AC SNF
Sbjct: 201 SNDEMLRLLVKMLRHG-LNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 259
Query: 252 -----------------ARILFNEIDSPDLASWNALIAG-----VASHSNANEAMSLFSE 289
A +F + P++ +NA+IAG + ANEAM LF E
Sbjct: 260 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 319
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M+ R + P T S+L AC G Q+H+ I K S+ + NA++ +Y+
Sbjct: 320 MQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGS 379
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ + L F K D VSW S+I +Q+ Q E LF +L S KPD T + ++
Sbjct: 380 IEDGLKCFHSTPK-LDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLS 438
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
ACA +A+++ Q+H Y KTG+ + N + +Y KCG + SA F +NPD+VS
Sbjct: 439 ACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVS 498
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
WS +I AQ GC EA+ LF M+ G++PN +T +GVL ACSH GLVEEGL + IM+
Sbjct: 499 WSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMK 558
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++GI P +H +C+VDLL RAG + EAE FI + D V+W+SLL++
Sbjct: 559 KDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSA 608
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 145/523 (27%), Positives = 243/523 (46%), Gaps = 56/523 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + Y+E + + ++ +++R+ T++ +S C L+LGR +H I
Sbjct: 89 NSLISGYTQMGFYHEVMNLFKEARM-SDLRLDKFTFSNALSVCGRTLDLRLGRLIHALIT 147
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+S V+L N +++MY KCG ++ AR+ F+ + + VSW ++IAG + ++ ++
Sbjct: 148 VSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLR 207
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSG--LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
L ++ML+ G+ + GS +KAC S+ G+ LH +K ++ AL+
Sbjct: 208 LLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDT 267
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL-----GYELEALCHFNEMLHHGAYQ 235
Y K + DA +F + +V + +MIA F ++ + EA+ F EM G +
Sbjct: 268 YAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGM-K 326
Query: 236 PNEFIFGSVFSACSNF----------ARIL------------------------------ 255
P+EF F S+ ACS A+I
Sbjct: 327 PSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKC 386
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F+ D+ SW +LI G + ++LF E+ PD T+ +L AC +
Sbjct: 387 FHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAV 446
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
G Q+H+Y IK G + + N+ + MYAKC + +A + FKE KN D VSW+ +I++
Sbjct: 447 KSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKET-KNPDIVSWSVMISS 505
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAF 434
QH A+E LF M S I P+HITF V+ AC+ +E + + K G+
Sbjct: 506 NAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITP 565
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLF---NFMENPDVVSWSSLI 474
+V ++D+ + G L A F +P V W SL+
Sbjct: 566 NVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDP--VMWRSLL 606
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 168/387 (43%), Gaps = 68/387 (17%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
NEA+ + F + ++ T++ ++ ACS++ + + G+++H I Q D + N
Sbjct: 311 NEAMYLF-FEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNA 369
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
++ +Y GS+ED F P+ +VVSWT++I G QN Q + L+ ++L SG P
Sbjct: 370 LVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPD 429
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
+FT ++ AC+ L +V G Q+HA+ IK+ G+ I QN+ I MY K I A F
Sbjct: 430 EFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFK 489
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL 255
D+ SW MI++ ++ G EA+ F E++ PN F V ACS+ +
Sbjct: 490 ETKNPDIVSWSVMISSNAQHGCAKEAVDLF-ELMKGSGIAPNHITFLGVLVACSHGGLV- 547
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
E + F M+ G+T + ACI L
Sbjct: 548 -------------------------EEGLRYFEIMKKDH----GITPNVKHSACIVDLLG 578
Query: 316 YQGM--QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
G + S+I+ GF+ D V W S++
Sbjct: 579 RAGRLAEAESFIMDSGFE--------------------------------GDPVMWRSLL 606
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPD 400
+AC H + R+ R++ +++P+
Sbjct: 607 SACRVHKATDTGKRVAERVI--ELEPE 631
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 108/218 (49%), Gaps = 2/218 (0%)
Query: 296 LPDGLTVHSLLCACIGRL-TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
LP ++ L C R +L G H ++IK F + + N +L MY KC A
Sbjct: 15 LPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAK 74
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F + K + VSWNS+I+ Q E+ LF S ++ D TF++ + C +
Sbjct: 75 KLFDRMPKR-NVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
L + +H IT +GL V + N L+D+Y KCG + AR +F + D VSW+SLI
Sbjct: 134 LDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLI 193
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
GY + G DE L+L +M G++ N L L AC
Sbjct: 194 AGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKAC 231
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 199/591 (33%), Positives = 316/591 (53%), Gaps = 89/591 (15%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S +A L+ +C RS + R VH IL+++ ++ +QN ++++YGKC L+DAR FD+
Sbjct: 16 SPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDR 75
Query: 96 MPQRNVV-------------------------------SWTAMIAGCSQNYQENDAIKLY 124
MPQRN SW +M++G +Q+ + ++++ +
Sbjct: 76 MPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYF 135
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
++M + + +++FGS + AC+GL + +G Q+HA V KS + + + +ALI MY+K
Sbjct: 136 VKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKC 195
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ A VFSG+ +++ +W S+I + + G EAL F M+ G +P+E SV
Sbjct: 196 GSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSG-LEPDEVTLASV 254
Query: 245 FSACSNF----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
SAC++ AR++ DL NAL+ A S NEA +F M R
Sbjct: 255 VSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIR- 313
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
NV ++++ YA+ + + A
Sbjct: 314 --------------------------------------NVVSETSMVSGYARAASVKAAR 335
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F ++ + + VSWN++IA Q+ + EE RLF + I P H TF +++ ACA +
Sbjct: 336 FMFSKMTQR-NVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANL 394
Query: 415 ASLEMVTQLHCYITKTGLAF------DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
A L + Q H ++ K G F D+FV N L+D+Y+KCGS+ ++F M+ D V
Sbjct: 395 ADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCV 454
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
SW+++I+GYAQ G G EAL++F +M G P+ VT++GVL ACSH GLVEEG H + M
Sbjct: 455 SWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM 514
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
E E+G+IP ++H +C+VDLL RAGC++EA++ I M + D VVW SLLA+
Sbjct: 515 E-EHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAA 564
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 210/462 (45%), Gaps = 86/462 (18%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS + + + E+L Y + + + ++ +SAC+ L L +G +VH +
Sbjct: 116 NSMVSGFAQHDRFEESL-EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVS 174
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S+ DV + + +++MY KCGS+ A F M +RN+V+W ++I QN ++A++
Sbjct: 175 KSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALE 234
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS-EHGSHLIAQNALIAMY 181
++++M+ SG+ P + T S++ AC+ L ++ G Q+HA V+K+ + L+ NAL+ MY
Sbjct: 235 VFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMY 294
Query: 182 TKFDRILDARNVF---------------SGIAR----------------KDVTSWGSMIA 210
K ++ +AR VF SG AR ++V SW ++IA
Sbjct: 295 AKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIA 354
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL--------------- 255
+++ G EAL F +L + P + FG++ SAC+N A +L
Sbjct: 355 GYTQNGENEEALRLF-RLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFE 413
Query: 256 -------------------------------FNEIDSPDLASWNALIAGVASHSNANEAM 284
F ++ D SWNA+I G A + EA+
Sbjct: 414 FQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEAL 473
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN---AIL 341
+F +M PD +T+ +LCAC + +G Y M +P+ + ++
Sbjct: 474 QIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRH---YFFSMEEHGLIPLKDHYTCMV 530
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ + L A + + + N D+V W S++AAC H E
Sbjct: 531 DLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIE 572
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
P+ F ++ +C + S +H I T + ++F+ N L+D+Y KC L ARKL
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
F+ M + +W+SLI + G DEA +LF M P+ + +++ +
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSM----PEPDQCSWNSMVSGFAQHDRF 128
Query: 519 EEGLHLYRIME------NEYGIIPTREHCSCVVDL 547
EE L + M NEY C+ ++DL
Sbjct: 129 EESLEYFVKMHREDFLLNEYSFGSALSACAGLMDL 163
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 193/617 (31%), Positives = 319/617 (51%), Gaps = 43/617 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +++L + Y EA Y + + + + +TY +++ACS+ ++L G +H HI
Sbjct: 354 NALIAALAQHGHYEEAFEQY-YQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHIS 412
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
DV + N +++MY +CG L AR F+ MP+R+++SW A+IAG ++ +A+K
Sbjct: 413 EVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMK 472
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
LY QM GV PG+ TF ++ AC+ + G+ +H +++S S+ NAL+ MY
Sbjct: 473 LYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYR 532
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
+ I++A+NVF G +D+ SW SMIA ++ G A F EM G +P++ F
Sbjct: 533 RCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEG-LEPDKITFA 591
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
SV C N A +F+ +
Sbjct: 592 SVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHR 651
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
++ SW A+I G A +A LF +M++ P T S+L AC+ L +G +V
Sbjct: 652 NVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVI 711
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
++I+ G++ + V NA+++ Y+K + +A VF ++ N D +SWN +IA Q+
Sbjct: 712 AHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKM-PNRDIMSWNKMIAGYAQNGLG 770
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
+ +M + + +F ++ AC+ ++LE ++H I K + DV V L
Sbjct: 771 GTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAAL 830
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+ +Y KCGSL A+++F+ +VV+W+++I YAQ G +AL F M G+ P+
Sbjct: 831 ISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDG 890
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
T +L+AC+H GLV EG ++ +E+++G+ PT EH C+V LL RAG EAE IN
Sbjct: 891 STFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLIN 950
Query: 563 QMACDADIVVWKSLLAS 579
QM D VW++LL +
Sbjct: 951 QMPFPPDAAVWETLLGA 967
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 163/598 (27%), Positives = 302/598 (50%), Gaps = 48/598 (8%)
Query: 21 AYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMY 80
AY TN + Y L+ C+ RSL +++H ++ + PD+ L N ++NMY
Sbjct: 72 AYQPRPTETN----RAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMY 127
Query: 81 GKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFG 140
KC S+ DA F KMP+R+V+SW ++I+ +Q + A +L+ +M +G +P + T+
Sbjct: 128 VKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYI 187
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
SI+ AC + G+++H+ +I++ + QN+L+ MY K + + AR VFSGI R+
Sbjct: 188 SILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRR 247
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF------------------- 241
DV S+ +M+ +++ Y E + F +M G P++ +
Sbjct: 248 DVVSYNTMLGLYAQKAYVEECIGLFGQMSSEG-IPPDKVTYINLLDAFTTPSMLDEGKRI 306
Query: 242 -------------------GSVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNA 280
++F C + A+ D+ +NALIA +A H +
Sbjct: 307 HKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHY 366
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
EA + +MR ++ + T S+L AC L G +HS+I ++G S+V + N++
Sbjct: 367 EEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSL 426
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
++MYA+C L A +F + K D +SWN+IIA + E +L+ +M + +KP
Sbjct: 427 ISMYARCGDLPRARELFNTMPKR-DLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPG 485
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
+TF ++ AC ++ +H I ++G+ + + N LM++Y +CGS+ A+ +F
Sbjct: 486 RVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFE 545
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
D++SW+S+I G+AQ G + A KLF M+ G+ P+ +T VL C + +E
Sbjct: 546 GTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALEL 605
Query: 521 GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G ++ ++ E G+ + ++++ R G + +A + + + +++ W +++
Sbjct: 606 GRQIHMLI-IESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLR-HRNVMSWTAMIG 661
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 167/614 (27%), Positives = 294/614 (47%), Gaps = 54/614 (8%)
Query: 9 LCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQP 68
L Q Y E + ++ I TY L+ A ++ L G+++H +
Sbjct: 258 LYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNS 317
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D+ + + M+ +CG + A+ + R+VV + A+IA +Q+ +A + Y QM
Sbjct: 318 DIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMR 377
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
GV+ + T+ S++ ACS ++ G +H+H+ + H S + N+LI+MY + +
Sbjct: 378 SDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLP 437
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
AR +F+ + ++D+ SW ++IA +++ EA+ + +M G +P F + SAC
Sbjct: 438 RARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGV-KPGRVTFLHLLSAC 496
Query: 249 SNF----------------------------------------ARILFNEIDSPDLASWN 268
+N A+ +F + D+ SWN
Sbjct: 497 TNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWN 556
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
++IAG A H + A LF EM+ L PD +T S+L C L G Q+H II+
Sbjct: 557 SMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIES 616
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
G +V + NA++ MY +C L +A VF L ++ + +SW ++I + + F L
Sbjct: 617 GLQLDVNLGNALINMYIRCGSLQDAYEVFHSL-RHRNVMSWTAMIGGFADQGEDRKAFEL 675
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
F +M KP TF+ ++ AC A L+ ++ +I +G D V N L+ Y K
Sbjct: 676 FWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSK 735
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
GS+ ARK+F+ M N D++SW+ +I GYAQ G G AL+ +M+ GV N + V +
Sbjct: 736 SGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSI 795
Query: 509 LTACSHVGLVEEGLHLY-----RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
L ACS +EEG ++ R M+ + + + ++ + A+ G + EA++ +
Sbjct: 796 LNACSSFSALEEGKRVHAEIVKRKMQGDVRV------GAALISMYAKCGSLEEAQEVFDN 849
Query: 564 MACDADIVVWKSLL 577
+ ++V W +++
Sbjct: 850 FT-EKNVVTWNAMI 862
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 200/604 (33%), Positives = 320/604 (52%), Gaps = 48/604 (7%)
Query: 21 AYDFSQN--NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
A DF +N T ++ ST ++SA +SL +L G VH + +V + + ++N
Sbjct: 333 AIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLIN 392
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MY KC +E A+ FD + +RN+V W AM+ G +QN + +KL+ +M G P +FT
Sbjct: 393 MYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFT 452
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
+ SI+ AC+ L + +GRQLH+ +IK +L +N L+ MY K + +AR F I
Sbjct: 453 YTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIR 512
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------- 251
+D SW ++I + + E EA F M+ G P+E S+ S C+N
Sbjct: 513 NRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDG-IAPDEVSLASILSGCANLQALEQGE 571
Query: 252 ---------------------------------ARILFNEIDSPDLASWNALIAGVASHS 278
AR +F+ + S + S NA+IAG A +
Sbjct: 572 QVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYA-QN 630
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG--FDSNVPV 336
+ EA+ LF EM++ L P +T SLL AC G L G Q+H I K G +D + +
Sbjct: 631 DLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDF-L 689
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
++L MY +A ++F E ++ W +II+ Q+ +EE +L+ M +
Sbjct: 690 GVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNN 749
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
+PD TF V+ AC+ +ASL +H I GL D + ++D+Y KCG + S+
Sbjct: 750 ARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSV 809
Query: 457 KLFNFMENP-DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
++F M + DV+SW+S+I+G+A+ G + ALK+F M+ + P+ VT +GVLTACSH
Sbjct: 810 QVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHA 869
Query: 516 GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
G V EG ++ IM + Y I+P +HC+C++DLL R G + EAE+FI+++ + + ++W +
Sbjct: 870 GRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWAT 929
Query: 576 LLAS 579
LL +
Sbjct: 930 LLGA 933
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 167/498 (33%), Positives = 278/498 (55%), Gaps = 16/498 (3%)
Query: 25 SQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCG 84
S N + TYA ++S+C+ L + LG++VH ++ + + + +++MY KCG
Sbjct: 172 SLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCG 231
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
SL DAR FD + + VSWTAMIAG Q +A+K++ M + G++P Q F ++I
Sbjct: 232 SLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVIT 291
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
AC GLG + L + ++++A N +I+ + K ++A + F + + V S
Sbjct: 292 ACVGLGRLDDACDLFVQM----PNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKS 347
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQ----PNEFIFGSV---FSACSNF--ARIL 255
S + + LEAL ++ ++H A + N ++ S+ ++ C A+ +
Sbjct: 348 TRSTLGSVLSAIASLEAL-NYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKV 406
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F+ +D +L WNA++ G A + A++ M LFSEMR PD T S+L AC L
Sbjct: 407 FDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECL 466
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
G Q+HS+IIK F+ N+ V N ++ MYAKC L A F E +N D+VSWN+II
Sbjct: 467 EMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQF-EFIRNRDNVSWNAIIVG 525
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
+Q +E F +F RM+ I PD ++ ++ CA + +LE Q+HC++ K+GL
Sbjct: 526 YVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTC 585
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
++ + L+D+Y+KCG++ +AR +F+ M + VVS +++I GYAQ EA+ LF M++
Sbjct: 586 LYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLV-EAIDLFQEMQN 644
Query: 496 LGVSPNLVTLVGVLTACS 513
G++P+ +T +L AC+
Sbjct: 645 EGLNPSEITFASLLDACT 662
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 155/492 (31%), Positives = 269/492 (54%), Gaps = 8/492 (1%)
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
L + I+++Y KCG++E A F+++ +R++++W ++++ S+ I + + G
Sbjct: 118 LGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCG 177
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
V P QFT+ ++ +C+ L + LG+Q+H VIK + + +LI MY+K ++DAR
Sbjct: 178 VSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDAR 237
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF 251
+F + D SW +MIA + ++G EAL F +M G P++ F +V +AC
Sbjct: 238 KIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLV-PDQVAFVTVITACVGL 296
Query: 252 ARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
R+ LF ++ + ++ +WN +I+G EA+ F M + T+ S+L
Sbjct: 297 GRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVL 356
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
A L G+ VH+ IK G +SNV V ++++ MYAKC + A VF L + +
Sbjct: 357 SAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDER-NL 415
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
V WN+++ Q+ A ++ +LFS M PD T+ ++ ACA + LEM QLH +
Sbjct: 416 VLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSF 475
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
I K +++FV N L+D+Y KCG+L AR+ F F+ N D VSW+++I+GY Q DEA
Sbjct: 476 IIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEA 535
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
+F RM G++P+ V+L +L+ C+++ +E+G ++ + G+ S ++D
Sbjct: 536 FNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKS-GLQTCLYAGSSLID 594
Query: 547 LLARAGCVHEAE 558
+ + G + A
Sbjct: 595 MYVKCGAIEAAR 606
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 137/244 (56%), Gaps = 6/244 (2%)
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H+ +K GF S + +AI+ +YAKC + A F +L K D ++WNS+++ +
Sbjct: 103 IHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKR-DILAWNSVLSMYSRQG 161
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
E++ F + + P+ T+ V+ +CA++ +++ Q+HC + K G F+ F
Sbjct: 162 SLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEG 221
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+D+Y KCGSL ARK+F+ + +PD VSW+++I GY Q G +EALK+F M+ LG+ P
Sbjct: 222 SLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVP 281
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ V V V+TAC +G +++ L+ M N + + ++ + GC EA DF
Sbjct: 282 DQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVA-----WNVMISGHVKRGCDIEAIDF 336
Query: 561 INQM 564
M
Sbjct: 337 FKNM 340
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 52/292 (17%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
EAL Y N N R +T+A ++ ACS L SL GR +H I D + + +
Sbjct: 737 EALQLYQEMHRN-NARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAV 795
Query: 77 LNMYGKCGSLEDARMGFDKMPQRN-VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
++MY KCG ++ + F++M +N V+SW +MI G ++N +A+K++ +M + + P
Sbjct: 796 VDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPD 855
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
TF ++ ACS G V GR++ FD ++ + +
Sbjct: 856 DVTFLGVLTACSHAGRVSEGREI-------------------------FDIMVHSYKI-- 888
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL 255
+ R D + MI + G+ EA E + ++PN I+ ++ AC RI
Sbjct: 889 -VPRLDHCA--CMIDLLGRWGFLKEA----EEFIDKLNFEPNAMIWATLLGAC----RIH 937
Query: 256 FNEID-----------SPDLASWNALIAGV-ASHSNANEAMSLFSEMRDREL 295
++I P+ +S L++ + A+ N +E S+ MR++ L
Sbjct: 938 GDDIRGRRAAEKLIELEPENSSPYVLLSNIYAASGNWDEVNSVRRAMREKGL 989
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 192/587 (32%), Positives = 306/587 (52%), Gaps = 42/587 (7%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
I TY L C LR LG++V DHI+ S Q ++ N ++ ++ CG++ +AR
Sbjct: 59 IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQT 118
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FD + + VV+W A+IAG +Q +A L+ QM+ + P TF ++ ACS +
Sbjct: 119 FDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGL 178
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
LG++ HA VIK S AL++MY K + AR VF G+ ++DV+++ MI +
Sbjct: 179 KLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGY 238
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------------------- 250
+K G +A F M G ++PN F S+ CS
Sbjct: 239 AKSGDGEKAFQLFYRMQQEG-FKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDD 297
Query: 251 ------------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
AR +F+++ D+ SW +I G A +SN +A LF+ M++
Sbjct: 298 VRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQE 357
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ PD +T ++ AC L ++HS +++ GF +++ V A++ MYAKC + +
Sbjct: 358 EGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKD 417
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A VF + + D VSW+++I A +++ EE F F M + ++PD +T+ +++ AC
Sbjct: 418 ARQVFDAMSRR-DVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACG 476
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+ +L++ +++ K L + V N L+++ +K GS+ AR +F M DVV+W+
Sbjct: 477 HLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNV 536
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
+I GY+ G EAL LF RM PN VT VGVL+ACS G VEEG + + +
Sbjct: 537 MIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGR 596
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
GI+PT E C+VDLL RAG + EAE IN+M + +W +LLA+
Sbjct: 597 GIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAA 643
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 189/401 (47%), Gaps = 42/401 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++ ++ CS+ +L G+ VH + + DV + ++ MY CGS+E AR FDKM
Sbjct: 265 SFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKM 324
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+VVSWT MI G ++N DA L+ M + G+ P + T+ II AC+ + L R
Sbjct: 325 KVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAR 384
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H+ V+++ G+ L+ AL+ MY K I DAR VF ++R+DV SW +MI A+ + G
Sbjct: 385 EIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENG 444
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
EA F+ ++ +P+ + ++ +AC +
Sbjct: 445 CGEEAFETFH-LMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVG 503
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR +F + D+ +WN +I G + H NA EA+ LF M
Sbjct: 504 NALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFR 563
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ +T +L AC + +G + SY++ G + + ++ + + L A L
Sbjct: 564 PNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAEL 623
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
+ + +S W++++AAC + + R R L S+
Sbjct: 624 LINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSE 664
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 184/608 (30%), Positives = 316/608 (51%), Gaps = 42/608 (6%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN Y E + + I P ++ ++S C+ ++ +G ++H + +
Sbjct: 190 QNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETY 249
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ N ++ +Y + + A F KM ++ VS+ ++I+G +Q + A++L+ +M +
Sbjct: 250 VCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDY 309
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
+ P T S++ AC+ G++C G QLH++VIK+ S +I + AL+ +Y I A
Sbjct: 310 LKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAH 369
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF 251
+F ++V W M+ AF KL E+ F +M G PN+F + S+ C++
Sbjct: 370 EMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLI-PNQFTYPSILRTCTSV 428
Query: 252 ----------------------------------------ARILFNEIDSPDLASWNALI 271
A ++ + D+ SW ALI
Sbjct: 429 GALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALI 488
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
+G A H+ EA+ F EM +R + D + S + AC G L QG Q+H+ G+
Sbjct: 489 SGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYS 548
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
++ + NA++++YA+C + A L F+++ DS+SWN +I+ Q E+ ++F++
Sbjct: 549 EDLSIGNALVSLYARCGRIKEAYLEFEKIDAK-DSISWNGLISGFAQSGYCEDALKVFAQ 607
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M ++++ TF + A A +A+++ Q+H I K G D+ V N L+ Y KCGS
Sbjct: 608 MNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGS 667
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+ AR+ F M + VSW+++I GY+Q G G+EA+ LF +M+ +G PN VT VGVL+A
Sbjct: 668 IEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSA 727
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
CSHVGLV +GL + M E+G++P H +CVVDL++RAG + A FI +M + D
Sbjct: 728 CSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDAT 787
Query: 572 VWKSLLAS 579
+W++LL++
Sbjct: 788 IWRTLLSA 795
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 181/585 (30%), Positives = 292/585 (49%), Gaps = 49/585 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY L+ C + SL +K+H IL + VL N ++++Y G L+ F+ M
Sbjct: 12 TYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDM 71
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG--LGSVCL 154
P R+V SW +I+G + N + L+ M++ V P + +F S+++ACSG +G +
Sbjct: 72 PNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIG-IRY 130
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
Q+HA +I I N LI +Y K I+ AR VF + KD SW +MI+ FS+
Sbjct: 131 AEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQ 190
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------- 249
GYE EA+ F EM H P ++F SV S C+
Sbjct: 191 NGYEEEAIHLFCEM-HTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETY 249
Query: 250 -------------NF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
NF A +F+++ S D S+N+LI+G+A ++ A+ LF++M+
Sbjct: 250 VCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDY 309
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
L PD +TV SLL AC L +G Q+HSY+IK G S++ V A+L +Y CS + A
Sbjct: 310 LKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAH 369
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F + + V WN ++ A + + E FR+F +M + P+ T+ ++ C +
Sbjct: 370 EMFLT-AQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSV 428
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+L++ Q+H + KTG F+V+V + L+D+Y K G L +A + + DVVSW++LI
Sbjct: 429 GALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALI 488
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
GYAQ EALK F M + G+ + + ++AC+ + + +G ++ G
Sbjct: 489 SGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIH-AQSYVSGY 547
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDA-DIVVWKSLLA 578
+ +V L AR G + EA ++ DA D + W L++
Sbjct: 548 SEDLSIGNALVSLYARCGRIKEA--YLEFEKIDAKDSISWNGLIS 590
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/592 (26%), Positives = 285/592 (48%), Gaps = 49/592 (8%)
Query: 30 NIRIRPSTYAGLISACSSLR-SLQLGRKVHDHILLSK--CQPDVVLQNHILNMYGKCGSL 86
N+ ++A ++ ACS R ++ ++H I+ C P ++ N ++ +Y K G +
Sbjct: 106 NVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSP--IISNPLIGLYAKNGLI 163
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
AR FD + ++ VSW AMI+G SQN E +AI L+ +M +G+ P + F S++ C
Sbjct: 164 ISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGC 223
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
+ + +G QLHA V K NAL+ +Y++ + A VFS + KD S+
Sbjct: 224 TKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFN 283
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------------- 250
S+I+ ++ G+ AL F +M +P+ S+ SAC++
Sbjct: 284 SLISGLAQQGFSDGALELFTKM-KRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIK 342
Query: 251 ------------------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
A +F + ++ WN ++ N +E+ +
Sbjct: 343 AGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRI 402
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
F +M+ + L+P+ T S+L C L G Q+H+ +IK GF NV VC+ ++ MYAK
Sbjct: 403 FRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAK 462
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
L A ++ + L ++ D VSW ++I+ QHN E + F ML I+ D+I F+
Sbjct: 463 HGKLDTAHVILRTLTED-DVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSS 521
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
+ ACA + +L Q+H +G + D+ + N L+ +Y +CG + A F ++ D
Sbjct: 522 AISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKD 581
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
+SW+ LI G+AQ G ++ALK+F +M + + T ++A +++ +++G ++
Sbjct: 582 SISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHA 641
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++ G E + ++ A+ G + +A +M D V W +++
Sbjct: 642 MIIKR-GFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKND-VSWNAMIT 691
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 123/494 (24%), Positives = 226/494 (45%), Gaps = 47/494 (9%)
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M G+ T+ ++ C GS+ ++LH ++K G+ + N L+ +Y
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+ VF + + V SW +I+ F + L F+ M+ P E F SV
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENV-SPTEISFASVLR 119
Query: 247 ACSNF-----------------------------------------ARILFNEIDSPDLA 265
ACS AR +F+ + + D
Sbjct: 120 ACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSV 179
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW A+I+G + + EA+ LF EM + P S+L C G Q+H+ +
Sbjct: 180 SWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALV 239
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
K G VCNA++T+Y++ +A VF ++ ++ D VS+NS+I+ Q ++
Sbjct: 240 FKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKM-QSKDEVSFNSLISGLAQQGFSDGA 298
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
LF++M +KPD +T ++ ACA +L QLH Y+ K G++ D+ V L+D+
Sbjct: 299 LELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDL 358
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y+ C + +A ++F + +VV W+ +++ + + E+ ++F +M+ G+ PN T
Sbjct: 359 YVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTY 418
Query: 506 VGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
+L C+ VG ++ G ++ ++++ G CS ++D+ A+ G + A + +
Sbjct: 419 PSILRTCTSVGALDLGEQIHTQVIKT--GFQFNVYVCSVLIDMYAKHGKLDTAHVILRTL 476
Query: 565 ACDADIVVWKSLLA 578
D D+V W +L++
Sbjct: 477 TED-DVVSWTALIS 489
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 185/389 (47%), Gaps = 44/389 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY ++ C+S+ +L LG ++H ++ + Q +V + + +++MY K G L+ A + +
Sbjct: 417 TYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTL 476
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ +VVSWTA+I+G +Q+ +A+K + +ML G+ F S I AC+G+ ++ GR
Sbjct: 477 TEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGR 536
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+HA S + L NAL+++Y + RI +A F I KD SW +I+ F++ G
Sbjct: 537 QIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSG 596
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL--------------------- 255
Y +AL F +M + + + F FGS SA +N A I
Sbjct: 597 YCEDALKVFAQM-NRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVS 655
Query: 256 -------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
F E+ + SWNA+I G + H NEA++LF +M+ +
Sbjct: 656 NALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEM 715
Query: 297 PDGLTVHSLLCAC--IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
P+ +T +L AC +G +T G S + G ++ + ++ L A
Sbjct: 716 PNHVTFVGVLSACSHVGLVTKGLGY-FESMSKEHGLVPKPAHYACVVDLISRAGFLSRAR 774
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAE 383
+E+ D+ W ++++AC H E
Sbjct: 775 KFIEEMPIEPDATIWRTLLSACTVHKNVE 803
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 189/614 (30%), Positives = 326/614 (53%), Gaps = 43/614 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S L + +EA++ + + + + P ++ ++SAC+ + +LG ++H I+
Sbjct: 185 ISGLSQNGREDEAILLF-CQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWG 243
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ + N ++ +Y + G+L A F KM +R+ +S+ ++I+G +Q + A++L+
Sbjct: 244 LSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFE 303
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + P T S++ AC+ +G+ G+QLH++VIK S LI + +L+ +Y K
Sbjct: 304 KMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCF 363
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I A F ++V W M+ A+ +LG E+ F +M G PN++ + S+
Sbjct: 364 DIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEG-LMPNQYTYPSIL 422
Query: 246 SACSNF----------------------------------------ARILFNEIDSPDLA 265
C++ AR + + D+
Sbjct: 423 RTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVV 482
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW A+IAG H EA+ LF EM ++ + D + S + AC G L QG Q+H+
Sbjct: 483 SWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQS 542
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
G+ ++ + NA++++YA+C +A L F+++ D++SWN++I+ Q EE
Sbjct: 543 YISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAK-DNISWNALISGFAQSGHCEEA 601
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
++FS+M + ++ + TF + A A A+++ Q+H + KTG + N L+ +
Sbjct: 602 LQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITL 661
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y KCGS+ A++ F M +VVSW+++I GY+Q G G EA+ LF M+ LG+ PN VT
Sbjct: 662 YSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTF 721
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
VGVL+ACSHVGLV EGL +R M E+G++P EH CVVDLL RA + A +FI +M
Sbjct: 722 VGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMP 781
Query: 566 CDADIVVWKSLLAS 579
+ D ++W++LL++
Sbjct: 782 IEPDAMIWRTLLSA 795
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 168/619 (27%), Positives = 312/619 (50%), Gaps = 46/619 (7%)
Query: 1 FSNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRS-LQLGRKVHD 59
F N +S L + L ++ L + N+ ST+A ++ ACS ++ Q+ ++H
Sbjct: 78 FWNKVISGLLAKKLASQVLGLFSL-MITENVTPDESTFASVLRACSGGKAPFQVTEQIHA 136
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
I+ ++ N ++++Y K G ++ A++ F+++ ++ VSW AMI+G SQN +E++
Sbjct: 137 KIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDE 196
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
AI L+ QM +S V+P + F S++ AC+ + LG QLH ++K S NAL+
Sbjct: 197 AILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVT 256
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
+Y+++ ++ A +FS + R+D S+ S+I+ ++ G+ AL F +M +P+
Sbjct: 257 LYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKM-QLDCMKPDCV 315
Query: 240 IFGSVFSACSNF----------------------------------------ARILFNEI 259
S+ SAC++ A F
Sbjct: 316 TVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTT 375
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
++ ++ WN ++ N +E+ +F +M+ L+P+ T S+L C L G
Sbjct: 376 ETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGE 435
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
Q+H+ +IK GF NV VC+ ++ MYAK L A + + L + D VSW ++IA QH
Sbjct: 436 QIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRL-REEDVVSWTAMIAGYTQH 494
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+ E +LF M I+ D+I F+ + ACA + +L Q+H +G + D+ +
Sbjct: 495 DLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIG 554
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
N L+ +Y +CG A F ++ D +SW++LI G+AQ G +EAL++F++M GV
Sbjct: 555 NALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVE 614
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
NL T ++A ++ +++G ++ +M + G E + ++ L ++ G + +A+
Sbjct: 615 ANLFTFGSAVSATANTANIKQGKQIHAMM-IKTGYDSETEASNVLITLYSKCGSIEDAKR 673
Query: 560 FINQMACDADIVVWKSLLA 578
+M + ++V W +++
Sbjct: 674 EFFEMP-EKNVVSWNAMIT 691
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 172/592 (29%), Positives = 287/592 (48%), Gaps = 51/592 (8%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IR TY L C + SL +K+H I S + VL + ++++Y G +++A
Sbjct: 6 IRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAI 65
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS-GL 149
FD +P NV W +I+G + + L+ M+ V P + TF S+++ACS G
Sbjct: 66 KLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGK 125
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
+ Q+HA +I GS + N LI +Y+K + A+ VF + KD SW +MI
Sbjct: 126 APFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMI 185
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------ 251
+ S+ G E EA+ F +M H A P ++F SV SAC+
Sbjct: 186 SGLSQNGREDEAILLFCQM-HKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGL 244
Query: 252 ----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
A +F+++ D S+N+LI+G+A ++ A+ LF +
Sbjct: 245 SSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEK 304
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M+ + PD +TV SLL AC Y+G Q+HSY+IKMG S++ + ++L +Y KC
Sbjct: 305 MQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFD 364
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ A F + + V WN ++ A Q E + +F +M + P+ T+ ++
Sbjct: 365 IETAHEYFLTT-ETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILR 423
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
C + +L++ Q+H + K+G F+V+V + L+D+Y K G L +AR + + DVVS
Sbjct: 424 TCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVS 483
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+++I GY Q EALKLF M + G+ + + ++AC+ + + +G +I
Sbjct: 484 WTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQG---QQIHA 540
Query: 530 NEY--GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA-DIVVWKSLLA 578
Y G + +V L AR G +A ++ DA D + W +L++
Sbjct: 541 QSYISGYSEDLSIGNALVSLYARCGRAQDA--YLAFEKIDAKDNISWNALIS 590
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 146/516 (28%), Positives = 248/516 (48%), Gaps = 49/516 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N +S L ++ + AL ++ Q + ++P T A L+SAC+S+ + G+++H +
Sbjct: 283 NSLISGLAQRGFSDRALQLFEKMQLDC---MKPDCVTVASLLSACASVGAGYKGKQLHSY 339
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
++ D++++ +L++Y KC +E A F NVV W M+ Q +++
Sbjct: 340 VIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSES 399
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+++QM G+MP Q+T+ SI++ C+ LG++ LG Q+H VIKS ++ + LI M
Sbjct: 400 YWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDM 459
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K + AR + + +DV SW +MIA +++ EAL F EM + G N
Sbjct: 460 YAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDN-IG 518
Query: 241 FGSVFSACSN--------------------------------FAR--------ILFNEID 260
F S SAC+ +AR + F +ID
Sbjct: 519 FSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKID 578
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ D SWNALI+G A + EA+ +FS+M + + T S + A + QG Q
Sbjct: 579 AKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQ 638
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H+ +IK G+DS N ++T+Y+KC + +A F E+ + + VSWN++I QH
Sbjct: 639 IHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEK-NVVSWNAMITGYSQHG 697
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVFVM 439
E LF M + P+H+TF V+ AC+ + + E ++ + GL
Sbjct: 698 YGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHY 757
Query: 440 NGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + L AR+ M PD + W +L+
Sbjct: 758 VCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLL 793
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/495 (25%), Positives = 240/495 (48%), Gaps = 49/495 (9%)
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M + G+ T+ + + C GS+ ++LHA + KS + + LI +Y
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+ +A +F I +V+ W +I+ + L F+ M+ P+E F SV
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENV-TPDESTFASVLR 119
Query: 247 ACS-----------------------------------------NFARILFNEIDSPDLA 265
ACS + A+++F + D
Sbjct: 120 ACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSV 179
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSY 324
SW A+I+G++ + +EA+ LF +M ++P S+L AC ++ L++ G Q+H +
Sbjct: 180 SWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACT-KIELFKLGEQLHGF 238
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
I+K G S VCNA++T+Y++ L A +F ++ + D +S+NS+I+ Q ++
Sbjct: 239 IVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRR-DRISYNSLISGLAQRGFSDR 297
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
+LF +M +KPD +T ++ ACA + + QLH Y+ K G++ D+ + L+D
Sbjct: 298 ALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLD 357
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y+KC + +A + F E +VV W+ +++ Y Q G E+ +F +M+ G+ PN T
Sbjct: 358 LYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYT 417
Query: 505 LVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
+L C+ +G ++ G ++ +++++ G CS ++D+ A+ G + A + +
Sbjct: 418 YPSILRTCTSLGALDLGEQIHTQVIKS--GFQFNVYVCSVLIDMYAKHGELDTARGILQR 475
Query: 564 MACDADIVVWKSLLA 578
+ + D+V W +++A
Sbjct: 476 LR-EEDVVSWTAMIA 489
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 196/393 (49%), Gaps = 52/393 (13%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY ++ C+SL +L LG ++H ++ S Q +V + + +++MY K G L+ AR ++
Sbjct: 417 TYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRL 476
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ +VVSWTAMIAG +Q+ +A+KL+ +M G+ F S I AC+G+ ++ G+
Sbjct: 477 REEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQ 536
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+HA S + L NAL+++Y + R DA F I KD SW ++I+ F++ G
Sbjct: 537 QIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSG 596
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL--------------------- 255
+ EAL F++M G + N F FGS SA +N A I
Sbjct: 597 HCEEALQVFSQMNQAGV-EANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEAS 655
Query: 256 -------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
F E+ ++ SWNA+I G + H +EA+SLF EM+ L+
Sbjct: 656 NVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLM 715
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN-VP-----VCNAILTMYAKCSVL 350
P+ +T +L AC + +G+ SY M + VP VC ++ + + ++L
Sbjct: 716 PNHVTFVGVLSACSHVGLVNEGL---SYFRSMSKEHGLVPKPEHYVC--VVDLLGRAALL 770
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
C A +E+ D++ W ++++AC H E
Sbjct: 771 CCAREFIEEMPIEPDAMIWRTLLSACTVHKNIE 803
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 185/555 (33%), Positives = 305/555 (54%), Gaps = 21/555 (3%)
Query: 44 ACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVS 103
AC +L ++ GR+ H + ++ + N +L MY KC + DA F +P+ N VS
Sbjct: 117 ACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVS 176
Query: 104 WTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS--GLGSVCL------- 154
+TAM+ G + + Q N+A +L+ ML++ + + S++ CS G G L
Sbjct: 177 FTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVL 236
Query: 155 -----GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G+Q+H IK S L N+L+ MY K + A +F + V SW MI
Sbjct: 237 SSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMI 296
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-----FARILFNEIDSPDL 264
A + + +A+ + M +HG ++P+E + ++ AC R +F+ + SP L
Sbjct: 297 AGYGQKSQSSKAIEYLQRMQYHG-FEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSL 355
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
+SWN +++G + + N EA+ LF EM+ R + PD T+ +L + G + L G QVH+
Sbjct: 356 SSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAV 415
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
K F +++ + + ++ MY+KC + A +F + + D V WNS++A ++ +E
Sbjct: 416 SQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAE-LDIVCWNSMMAGLSLNSLDKE 474
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
F F +M + P ++ V+ CAK++SL Q+H I + G D FV + L+D
Sbjct: 475 AFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALID 534
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y KCG + +AR +F+ M + V+W+ +I GYAQ GCGDEA+ L+ M G P+ +T
Sbjct: 535 MYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGIT 594
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
V VLTACSH GLV+ G+ ++ M+ E+G+ P +H +C++D L RAG +HEAE I++M
Sbjct: 595 FVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKM 654
Query: 565 ACDADIVVWKSLLAS 579
C D ++W+ LL+S
Sbjct: 655 PCKYDPIIWEVLLSS 669
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 136/547 (24%), Positives = 243/547 (44%), Gaps = 91/547 (16%)
Query: 36 STY-AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
+TY A L+ C ++ G+ +H H+L S+ D L N ++ Y KC +++ +R FD
Sbjct: 5 TTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFD 64
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK--ACSGLGSV 152
+MP+R++ +W A++ + + DA L+ +M + ++ ++ + AC L V
Sbjct: 65 QMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDV 124
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
GR+ H IK +++ NAL+ MY K I DA F + + S+ +M+
Sbjct: 125 ECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGL 184
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
+ EA F ML + + + SV CS F DS D+ S +
Sbjct: 185 ADSDQVNEAFRLFRLMLRNRIH-VDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSD---- 239
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
VH G QVH IK GF+S
Sbjct: 240 -----------------------------VH--------------GQQVHCLTIKHGFES 256
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
++ + N++L MYAK + +A ++F + VSWN +IA Q +Q+ + RM
Sbjct: 257 DLHLNNSLLDMYAKNGNMDSAEMIFVNM-PEVSVVSWNVMIAGYGQKSQSSKAIEYLQRM 315
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
+PD IT+ +++ AC IK G +
Sbjct: 316 QYHGFEPDEITYVNMLVAC-----------------------------------IKSGDI 340
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
+ R++F+ M +P + SW++++ GY+Q EA+KLF M+ V P+ TL +L++
Sbjct: 341 EAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSL 400
Query: 513 SHVGLVEEGLHLYRIMENEYGIIPTREH-CSCVVDLLARAGCVHEAEDFINQMACDADIV 571
+ + L+E G ++ + ++ + T + S ++ + ++ G V A+ +++A + DIV
Sbjct: 401 AGMMLLEGGRQVHAV--SQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIA-ELDIV 457
Query: 572 VWKSLLA 578
W S++A
Sbjct: 458 CWNSMMA 464
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 194/589 (32%), Positives = 306/589 (51%), Gaps = 42/589 (7%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+ + ++ AC+ + L LG++VH ++++ D + N ++ +Y KCG DAR
Sbjct: 6 IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDAR 65
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD +P R+VVSW A+ + + +A+ L+ M+ SG+ P +F+ S+I C+GL
Sbjct: 66 SLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLE 125
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
GR++H ++IK + S + NAL+ MY K + DA +VF IA+ D+ SW ++IA
Sbjct: 126 DSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIA 185
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------------ 252
Y AL EM G PN F S AC+ A
Sbjct: 186 GCVLHEYHHRALELLREMNKSGMC-PNMFTLSSALKACAGMALRELGRQLHSSLIKMDMG 244
Query: 253 ----------------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
R++F + D+ +WNA+I+G + + EA SLF M
Sbjct: 245 SDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLM 304
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ + T+ ++L + Y Q+H+ +K GF+ + V N+++ Y KC +
Sbjct: 305 HTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHV 364
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
+A VF+E D V + S++ A Q Q EE RL+ M IKPD + ++ A
Sbjct: 365 EDATRVFEE-SPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNA 423
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
CA +++ E Q+H +I K G D+F N L+++Y KCGS+ A F+ + +VSW
Sbjct: 424 CASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSW 483
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
S++I G AQ G G EAL+LF +M +GV PN +TLV VL AC+H GLV E H + M+
Sbjct: 484 SAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKI 543
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+GI P +EH +C++DLL RAG + A + +N+M A+ +VW +LL +
Sbjct: 544 LFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGA 592
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 245/490 (50%), Gaps = 48/490 (9%)
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G+ +F F S++KAC+ + LG+Q+H V+ + S N+L+ +Y K DA
Sbjct: 5 GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
R++F I + V SW ++ + + EA+ F++M+ G +PNEF S+ + C+
Sbjct: 65 RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSG-IRPNEFSLSSMINVCTG 123
Query: 251 --------------------------------FARI--------LFNEIDSPDLASWNAL 270
+A++ +F+EI PD+ SWNA+
Sbjct: 124 LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAI 183
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
IAG H + A+ L EM + P+ T+ S L AC G G Q+HS +IKM
Sbjct: 184 IAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDM 243
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
S+ + ++ MY+KC+ + +A LVFK L D ++WN++I+ Q+ + EE LF
Sbjct: 244 GSDSFLGVGLIDMYSKCNSMDDARLVFK-LMPERDMIAWNAVISGHSQNEEDEEAASLFP 302
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
M I + T + V+ + A + + M Q+H K+G FD +V+N L+D Y KCG
Sbjct: 303 LMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCG 362
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ A ++F D+V ++SL+ YAQ G G+EAL+L+ M+ G+ P+ +L
Sbjct: 363 HVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLN 422
Query: 511 ACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
AC+ + E+G +H++ + ++G + + +V++ A+ G + +A +++
Sbjct: 423 ACASLSAYEQGKQVHVHIL---KFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRG 479
Query: 569 DIVVWKSLLA 578
IV W +++
Sbjct: 480 -IVSWSAMIG 488
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 130/239 (54%), Gaps = 1/239 (0%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN +E + + I +T + ++ + ++L++ + R++H L S + D
Sbjct: 290 QNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNY 349
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ N +++ YGKCG +EDA F++ P ++V +T+++ +Q+ Q +A++LY++M G
Sbjct: 350 VVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRG 409
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
+ P F S++ AC+ L + G+Q+H H++K S + A N+L+ MY K I DA
Sbjct: 410 IKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDAS 469
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
FS I + + SW +MI ++ GY EAL F +ML G PN SV AC++
Sbjct: 470 CAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGV-PPNHITLVSVLCACNH 527
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 194/548 (35%), Positives = 296/548 (54%), Gaps = 39/548 (7%)
Query: 35 PST--YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
P T Y LI+ L L+ R V DHI QP++ N +L+ Y K G L+D +
Sbjct: 38 PETFLYNNLINTYGKLGDLKNARNVFDHI----PQPNLFSWNTLLSAYSKLGYLQDMQRV 93
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGS 151
FD MP +VVSW ++++G + N ++++++Y ML+ G V + TF +++ S G
Sbjct: 94 FDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGF 153
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
V LGRQ+H + K + S+L + L+ MY K I DA +F I K++ + +MI
Sbjct: 154 VDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITG 213
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALI 271
+ + +EA LF+ + D SW +I
Sbjct: 214 LLRCRFIVEA-------------------------------EQLFDNMPEKDSISWTTII 242
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
G+ + EA+ F EM D T S+L AC G L L +G Q+H+YII+ +
Sbjct: 243 TGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQ 302
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
N+ V +A+L MY KC + A VF+++ ++ + +SW +++ Q+ +EE R+F
Sbjct: 303 DNIFVGSALLDMYCKCRNVKYAEAVFRKM-RHKNVISWTAMLVGYGQNGYSEEAVRIFCD 361
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M ++I PD T V+ +CA +ASLE Q H +GL V V N L+ +Y KCGS
Sbjct: 362 MQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGS 421
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
L A +LF+ M+ D VSW++L+ GYAQFG +E + LF M + G+ P+ VT VGVL+A
Sbjct: 422 LEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSA 481
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
CS GLVE+G H + M E+ I P +H +C++DLL+RAG + EA++FINQM D +
Sbjct: 482 CSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAI 541
Query: 572 VWKSLLAS 579
W +LL+S
Sbjct: 542 GWATLLSS 549
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 204/448 (45%), Gaps = 77/448 (17%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S L +E++ Y+ + ++ + T++ ++ S+ + LGR++H I
Sbjct: 106 NSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIF 165
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVV-------------------- 102
Q + + + +++MY K G + DA F+++P++N+V
Sbjct: 166 KFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQ 225
Query: 103 -----------SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
SWT +I G +QN +A+ + +M G QFTFGS++ AC G +
Sbjct: 226 LFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLA 285
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ G+Q+HA++I++++ ++ +AL+ MY K + A VF + K+V SW +M+
Sbjct: 286 LDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVG 345
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------------- 254
+ + GY EA+ F +M P++F GSV S+C+N A +
Sbjct: 346 YGQNGYSEEAVRIFCDM-QRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLIC 404
Query: 255 -----------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
LF+E+ D SW AL++G A ANE +SLF M
Sbjct: 405 FVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETML 464
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP---VCNAILTMYAKCS 348
++PDG+T +L AC + +G ++K + +P C ++ + ++
Sbjct: 465 AHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTC--MIDLLSRAG 522
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAAC 376
L A ++ + D++ W +++++C
Sbjct: 523 RLEEAKNFINQMPFSPDAIGWATLLSSC 550
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 7/241 (2%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN Y+E V I T +IS+C++L SL+ G + H L S V
Sbjct: 348 QNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVT 407
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ N ++ +YGKCGSLE A F +M R+ VSWTA+++G +Q + N+ I L+ ML G
Sbjct: 408 VSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHG 467
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILD 189
++P TF ++ ACS G V G ++K EH I + +I + ++ R+ +
Sbjct: 468 IVPDGVTFVGVLSACSRAGLVEKGYHYFECMVK-EHRITPIPDHYTCMIDLLSRAGRLEE 526
Query: 190 ARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ-PNEFI-FGSVFS 246
A+N + + D W +++++ +L LE E LH Q P +I S+++
Sbjct: 527 AKNFINQMPFSPDAIGWATLLSS-CRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYA 585
Query: 247 A 247
A
Sbjct: 586 A 586
>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
Length = 969
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 201/589 (34%), Positives = 307/589 (52%), Gaps = 50/589 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++S C + L+ GR++H ++ S + VV+ N +L MY +C S ED+R FD+M
Sbjct: 318 TFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRM 377
Query: 97 PQRNVVSWTAMIAGCSQNYQE-NDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
R+ VSW+ +I CS+ DA+ LY ML GVMP +++AC L + G
Sbjct: 378 SVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAELKGG 437
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ +HAHVI+S L+ +L+ MY K + +AR VF I + W SMI A+ +
Sbjct: 438 KLVHAHVIESGLEGDLVGI-SLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAYQEK 496
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA----------------------- 252
EAL F EM G P+ F +V +AC N A
Sbjct: 497 DPH-EALHLFREMQPEGV-SPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVRV 554
Query: 253 -----------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
R +F+ + D+ SWN +IA + A+SL M+ +
Sbjct: 555 ATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGM 614
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD T SLL AC L G Q+HS+I + ++++ + ++TMYA C L NA
Sbjct: 615 RPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNARE 674
Query: 356 VFKELGKNA-----DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
+F + N+ D W S+I A QH + + L+ +M + Q++ D +TF V+ A
Sbjct: 675 IFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNA 734
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
CA ++ L +H + + GLA DV V N ++ +Y KCGS A +F ++ D+ W
Sbjct: 735 CAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISLW 794
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
++LI YA+ G G++AL +F R+R G+ + +T V +L+ACSHVGL+EEG + M
Sbjct: 795 TALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFASMA- 853
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
E GI P EH SC+VDLLARAG +H AE+F+++M A+ +V +LLA+
Sbjct: 854 ELGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAANTIVLTALLAA 902
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 172/584 (29%), Positives = 299/584 (51%), Gaps = 52/584 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L++AC+ L +L+ G+ + D + ++ + D+ ++N +NMY KCG L+ A F +M +R+
Sbjct: 16 LLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGAVQTFARMKRRD 75
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
VVSWT MI SQ+ + + +++L+ +ML G P TF SI+ C + GRQ+HA
Sbjct: 76 VVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHA 135
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDAR-NVFSGIARKDVTSWGSMIAAFSKLGYEL 219
V++S SH++ N+L+ MY++ D+R F+ + R+DV SW MI A+S+ G
Sbjct: 136 LVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYSQDGKFS 195
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------------ 249
++ F EML G PN F S+ S C
Sbjct: 196 LSIQLFREMLLEGT-APNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIGVLN 254
Query: 250 ------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
+ A F + D+ SW +I + + ++ LF EM P
Sbjct: 255 LTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAP 314
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+ +T S+L C L QG Q+H+ +++ +S+V V N++L MY++C ++ +F
Sbjct: 315 NSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLF 374
Query: 358 KELGKNADSVSWNSIIAACLQHN-QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
+ DSVSW++II AC + + + L+ ML + P + + V+ AC +A
Sbjct: 375 DRMSVR-DSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAE 433
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L+ +H ++ ++GL D+ ++ L+++Y KCG++G ARK+F+ + N + W+S+I
Sbjct: 434 LKGGKLVHAHVIESGLEGDLVGIS-LVNMYAKCGTVGEARKVFDRINNRSRILWNSMITA 492
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGII 535
Y Q EAL LF M+ GVSP+ +T + VL AC + +E G ++ RI+++ G
Sbjct: 493 Y-QEKDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDS--GFA 549
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + ++ A+ G + EA + M D+V W +++A+
Sbjct: 550 ADVRVATALFNMYAKCGSLGEARGVFDSMVF-RDVVSWNNMIAA 592
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 184/597 (30%), Positives = 286/597 (47%), Gaps = 64/597 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM-GFDK 95
T+ ++S C + L+ GR++H ++ S + VV+ N +L MY +C S ED+RM F +
Sbjct: 113 TFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFAR 172
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M +R+VVSWT MI SQ+ + + +I+L+ +ML G P TF SI+ C + G
Sbjct: 173 MKRRDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQG 232
Query: 156 RQLHAHVIKSEHGSHLI--AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
RQ+HA V++S SHL N I MY K + A F+ + R+DV SW MI A+S
Sbjct: 233 RQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYS 292
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------ 249
+ G +L F EML G PN F S+ S C
Sbjct: 293 QDGKFSLSLQLFREMLLEGT-APNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHV 351
Query: 250 ----------------NFARILFNEIDSPDLASWNALIAGVASH-SNANEAMSLFSEMRD 292
+R LF+ + D SW+ +I + S+ +A+ L+ M
Sbjct: 352 VVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLH 411
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
++P L + +L AC L G VH+++I+ G + ++ V +++ MYAKC +
Sbjct: 412 EGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDL-VGISLVNMYAKCGTVGE 470
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A VF + N + WNS+I A Q E LF M + PD ITF V+ AC
Sbjct: 471 ARKVFDRI-NNRSRILWNSMITA-YQEKDPHEALHLFREMQPEGVSPDRITFMTVLNACV 528
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
A LE +H I +G A DV V L ++Y KCGSLG AR +F+ M DVVSW++
Sbjct: 529 NAADLENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNN 588
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI----- 527
+I Y Q G+ A+ L M+ G+ P+ T +L ACS + +G ++
Sbjct: 589 MIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESR 648
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAED-----FINQMACDADIVVWKSLLAS 579
+EN+ ++ + ++ + A G ++ A + F N D+ +W S++ +
Sbjct: 649 LENDIVMV------TGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITA 699
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 230/481 (47%), Gaps = 58/481 (12%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ P T A ++ AC SL L+ G+ VH H++ S + D+V + ++NMY KCG++ +AR
Sbjct: 414 VMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDLVGIS-LVNMYAKCGTVGEAR 472
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQEND---AIKLYIQMLQSGVMPGQFTFGSIIKACS 147
FD++ R+ + W +MI YQE D A+ L+ +M GV P + TF +++ AC
Sbjct: 473 KVFDRINNRSRILWNSMITA----YQEKDPHEALHLFREMQPEGVSPDRITFMTVLNACV 528
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
+ GR +H ++ S + + AL MY K + +AR VF + +DV SW +
Sbjct: 529 NAADLENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNN 588
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------ 249
MIAA+ + G + E + +P++ F S+ +ACS
Sbjct: 589 MIAAYVQ-GRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAES 647
Query: 250 ----------------------NFARILFNEIDS------PDLASWNALIAGVASHSNAN 281
N AR +F+ I S DL W ++I H
Sbjct: 648 RLENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYR 707
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
+A+ L+ +M R++ D +T S+L AC L QG +H+ +++ G ++V V N+I+
Sbjct: 708 KALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVANSIV 767
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
MY KC A +VF E K+ D W ++IA+ +H E+ +F R+ I+ +
Sbjct: 768 FMYGKCGSFDEASIVF-EKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELSN 826
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
+TF ++ AC+ + +E + + + G+ ++ + L+D+ + G L +A + +
Sbjct: 827 LTFVAMLSACSHVGLIEEGCEFFASMAELGIEPNMEHHSCLVDLLARAGHLHTAEEFLSR 886
Query: 462 M 462
M
Sbjct: 887 M 887
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 221/500 (44%), Gaps = 55/500 (11%)
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M + G+ P + +++ AC+ LG++ G+ + + ++ + +N I MY K
Sbjct: 1 MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+ A F+ + R+DV SW MI A+S+ G +L F EML G PN F S+ S
Sbjct: 61 LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGT-APNSVTFVSILS 119
Query: 247 ACSN--------------------------------FARI---------LFNEIDSPDLA 265
C ++R F + D+
Sbjct: 120 GCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVV 179
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW +I + + ++ LF EM P+ +T S+L C L QG Q+H+ +
Sbjct: 180 SWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALV 239
Query: 326 IKMGFDS--NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
++ +S ++ V N + MY KC L A+ F + K D VSW +I A Q +
Sbjct: 240 VESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARM-KRRDVVSWTVMIGAYSQDGKFS 298
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
+LF ML P+ +TF ++ C + LE Q+H + ++ L V V N L+
Sbjct: 299 LSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLL 358
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG--CGDEALKLFTRMRSLGVSPN 501
+Y +C S +R LF+ M D VSWS++I+ ++ C D AL L+ M GV P
Sbjct: 359 GMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRD-ALPLYRSMLHEGVMPK 417
Query: 502 LVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
+ L VL AC + ++ G +H + I G + +V++ A+ G V EA
Sbjct: 418 TLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDLVG----ISLVNMYAKCGTVGEARK 473
Query: 560 FINQMACDADIVVWKSLLAS 579
+++ + I +W S++ +
Sbjct: 474 VFDRINNRSRI-LWNSMITA 492
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 189/419 (45%), Gaps = 49/419 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +++AC + L+ GR +H I+ S DV + + NMY KCGSL +AR FD M
Sbjct: 519 TFMTVLNACVNAADLENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSM 578
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+VVSW MIA Q AI L M G+ P + TF S++ ACS + GR
Sbjct: 579 VFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGR 638
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI------ARKDVTSWGSMIA 210
Q+H+ + +S + ++ LI MY + +AR +F I +D+ W SMI
Sbjct: 639 QIHSWIAESRLENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMIT 698
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------- 251
A+ + G +AL E +H + + F SV +AC++
Sbjct: 699 AYEQHGEYRKAL-ELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLA 757
Query: 252 ---------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
A I+F + D++ W ALIA A H + +A+ +F +
Sbjct: 758 TDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISLWTALIASYARHGHGEQALWIFRRL 817
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
R + LT ++L AC + +G + + + ++G + N+ + ++ + A+ L
Sbjct: 818 RQDGIELSNLTFVAMLSACSHVGLIEEGCEFFASMAELGIEPNMEHHSCLVDLLARAGHL 877
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM--LASQIKPDHITFNDV 407
A + A+++ +++AAC H E R+ ++ L + + ++T +++
Sbjct: 878 HTAEEFLSRMPVAANTIVLTALLAACRVHGDVERARRVAEKLEALDPESEAPYVTLSNI 936
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 195/581 (33%), Positives = 302/581 (51%), Gaps = 42/581 (7%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A + AC+ R+ + G +VH +V + ++N+Y K G ++ A FD +P
Sbjct: 141 ASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPA 200
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
RN V+WTA+I G SQ Q A++L+ +M GV P +F S ACSGLG V GRQ+
Sbjct: 201 RNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQI 260
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H + ++ S NALI +Y K R+L AR +F + +++ SW +MIA + + +
Sbjct: 261 HGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLD 320
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA-------------------------- 252
EA+ F ++ G +QP+ F S+ ++C + A
Sbjct: 321 TEAMSMFWQLSQAG-WQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNA 379
Query: 253 --------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
R +F + D S+NA+I G A + A+ +F +MR L P
Sbjct: 380 LIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPS 439
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
LT SLL R L Q+H I+K G ++ +A++ +Y+K S++ +A LVF
Sbjct: 440 LLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFS 499
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
L +N D V WN++I Q+ + EE +LF+R+ S + P+ TF ++ + +AS+
Sbjct: 500 -LMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIF 558
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
Q H I K G D + N L+D+Y KCG + R LF DV+ W+S+I YA
Sbjct: 559 HGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYA 618
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
Q G +EAL +F M GV PN VT V VL+AC+H GLV+EGLH + M+ +Y + P
Sbjct: 619 QHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGT 678
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH + VV+L R+G +H A++FI +M + +W+SLL++
Sbjct: 679 EHYASVVNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSA 719
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 170/587 (28%), Positives = 293/587 (49%), Gaps = 54/587 (9%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+S + R ++ H ++S PD+ L N +L Y K G L DAR FD MP RN
Sbjct: 36 LLSCLAGDRLRRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRN 95
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM------PGQFTFGSIIKACSGLGSVCL 154
+VSW + I+ +Q+ +E+DA+ L+ +G P +F S ++AC+ +
Sbjct: 96 LVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARF 155
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G Q+H K +++ AL+ +Y K RI A +VF + ++ +W ++I +S+
Sbjct: 156 GEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQ 215
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------------ 250
G AL F M G +P+ F+ S SACS
Sbjct: 216 AGQAGVALELFGRMGLDGV-RPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDAS 274
Query: 251 ----------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
AR LF+ +++ +L SW +IAG +S EAMS+F ++
Sbjct: 275 VVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAG 334
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
PD S+L +C ++QG QVH+++IK +S+ V NA++ MYAKC L A
Sbjct: 335 WQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEAR 394
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
VF+ L ++ D++S+N++I + +F +M +KP +TF ++G +
Sbjct: 395 AVFEALAED-DAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSR 453
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+ LE+ Q+H I K+G + D++ + L+D+Y K + A+ +F+ M+N D+V W+++I
Sbjct: 454 SDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMI 513
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYG 533
G AQ G+EA+KLF R+R G++PN T V ++T S + + G + +I++
Sbjct: 514 FGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGAD 573
Query: 534 IIPTREHCS-CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P H S ++D+ A+ G + E + + D++ W S++++
Sbjct: 574 SDP---HISNALIDMYAKCGFIEEGR-LLFESTLGKDVICWNSMIST 616
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 150/494 (30%), Positives = 249/494 (50%), Gaps = 48/494 (9%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP + A SACS L ++ GR++H + + + D + N ++++Y KC L AR
Sbjct: 234 VRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLAR 293
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD M RN+VSWT MIAG QN + +A+ ++ Q+ Q+G P F SI+ +C L
Sbjct: 294 RLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLA 353
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ GRQ+HAHVIK++ S +NALI MY K + + +AR VF +A D S+ +MI
Sbjct: 354 AIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIE 413
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------- 249
+++LG A+ F +M + + +P+ F S+ S
Sbjct: 414 GYARLGDLTGAVEIFGKM-RYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTS 472
Query: 250 -------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ A+++F+ + + D+ WNA+I G+A + EA+ LF+ +
Sbjct: 473 LDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARL 532
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
R L P+ T +L+ +++ G Q H+ IIK G DS+ + NA++ MYAKC +
Sbjct: 533 RVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFI 592
Query: 351 CNALLVFKE-LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L+F+ LGK D + WNS+I+ QH AEE +F M + ++P+++TF V+
Sbjct: 593 EEGRLLFESTLGK--DVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLS 650
Query: 410 ACAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDV 467
ACA + E + + TK + +++++ + G L +A++ M P
Sbjct: 651 ACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPVA 710
Query: 468 VSWSSLILGYAQFG 481
W SL+ FG
Sbjct: 711 TIWRSLLSACHLFG 724
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 15/266 (5%)
Query: 299 GLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
G ++ LL +C+ L + + H+ + G ++ + N +L Y+K L +A +F
Sbjct: 29 GGSLAQLLLSCLAGDRLRRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLF 88
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI------KPDHITFNDVMGAC 411
+ + + VSW S I+ QH + ++ LF+ ++ P+ + AC
Sbjct: 89 DSM-PSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRAC 147
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
A+ + Q+H K GL +VFV L+++Y K G + +A +F+ + + V+W+
Sbjct: 148 AQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWT 207
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL----YRI 527
++I GY+Q G AL+LF RM GV P+ L +ACS +G VE G + YR
Sbjct: 208 AVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRT 267
Query: 528 -MENEYGIIPT--REHCSCVVDLLAR 550
E++ ++ +C C LLAR
Sbjct: 268 AAESDASVVNALIDLYCKCSRLLLAR 293
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 198/619 (31%), Positives = 318/619 (51%), Gaps = 45/619 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S K+ EA +++ T ++ S+ ++SA +SL L G VH +
Sbjct: 278 NVMISGHAKRGFAEEA-ISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAI 336
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+V + + ++NMY KC ++ A+ F+ + +RN+V W AM+ G +QN + ++
Sbjct: 337 KEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVME 396
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ M + G P +FTF SI AC+ L + G QLH +IK++ S+L NAL+ MY
Sbjct: 397 FFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYA 456
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + +AR F + D SW ++I + + Y EA F M+ +G P+E
Sbjct: 457 KSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVL-PDEVSLA 515
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
S+ SAC+N AR +F +
Sbjct: 516 SIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYR 575
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
++ S NALIAG + S+ EA+ LF E++ L P +T LL C G L G Q+H
Sbjct: 576 NVVSINALIAGY-TMSHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIH 634
Query: 323 SYIIKMGF-DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
++K GF S+ VC ++L MY ++ +F EL V W ++I+ Q N
Sbjct: 635 GQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNH 694
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
E+ + + M + I PD TF V+ ACA M+SL+ ++H I TG D +
Sbjct: 695 HEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSS 754
Query: 442 LMDIYIKCGSLGSARKLFNFMENPD-VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+D+Y KCG + + ++F+ M + V+SW+S+I+G A+ G +EAL++F +M + P
Sbjct: 755 LIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIP 814
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ VT +GVL+ACSH G V EG ++ +M N Y + P +H C+VD+L R G ++EAE+F
Sbjct: 815 DEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEF 874
Query: 561 INQMACDADIVVWKSLLAS 579
IN++ C AD ++W +LL +
Sbjct: 875 INKLGCKADPMLWSTLLGA 893
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 280/522 (53%), Gaps = 8/522 (1%)
Query: 48 LRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAM 107
L++L + +H L +L N I+++Y KCG+++ A+ F ++ +++V +W ++
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 108 IAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
++ + ++ ++ M GV P +FTF ++ ACSGL + G+Q+H V K
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGF 173
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
G Q LI MY K + DAR VF G D SW ++IA + + G+ +EA+ F++
Sbjct: 174 GFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDK 233
Query: 228 MLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANE 282
M G + P++ +V +A R+ LF +I +P++ +WN +I+G A A E
Sbjct: 234 MQRVG-HVPDQIALVTVINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEE 292
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
A+S F E++ L ++ S+L A L G VH+ IK G D NV V +A++
Sbjct: 293 AISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVN 352
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
MYAKCS + A VF LG+ + V WN+++ Q+ A+E+ FS M +PD
Sbjct: 353 MYAKCSKMDAAKQVFNSLGER-NIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEF 411
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
TF + ACA + L+ QLH + K ++FV N L+D+Y K G+L ARK F FM
Sbjct: 412 TFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFM 471
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
+ D VSW+++I+GY Q DEA +F RM S GV P+ V+L +++AC++V ++G
Sbjct: 472 KIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQ 531
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
+ ++ + G+ + S ++D+ + G V A D M
Sbjct: 532 QCHCLLV-KVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSM 572
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 163/566 (28%), Positives = 291/566 (51%), Gaps = 28/566 (4%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
N +R T+A ++SACS L+ + G++VH + Q +++MY KC +L
Sbjct: 135 NHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLR 194
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
DAR+ FD + VSWT +IAG ++ +A+K++ +M + G +P Q ++I A
Sbjct: 195 DARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINAYV 254
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV----T 203
LG + R+L + +++A N +I+ + K +A + F + + + +
Sbjct: 255 ALGRLADARKLFTQIPN----PNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRS 310
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP---NEFIFGS----VFSACSNF--ARI 254
S GS+++A + L ++ ++ M+H A + + GS +++ CS A+
Sbjct: 311 SLGSVLSAIASL-----SMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQ 365
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+FN + ++ WNA++ G A + A E M FS M+ PD T S+ AC
Sbjct: 366 VFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHY 425
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
L G Q+H+ +IK F SN+ V NA++ MYAK L A F E K D+VSWN+II
Sbjct: 426 LDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQF-EFMKIHDNVSWNAIIV 484
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
+Q +E F +F RM+++ + PD ++ ++ ACA + + Q HC + K GL
Sbjct: 485 GYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDT 544
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
+ L+D+Y+KCG + +AR +F M +VVS ++LI GY +EA+ LF ++
Sbjct: 545 STCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSHL-EEAIHLFQEIQ 603
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREH-CSCVVDLLARAG 552
+G+ P VT G+L C ++ G ++ ++M ++G + + E C ++ + +
Sbjct: 604 MVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVM--KWGFLSSSEMVCVSLLCMYMNSQ 661
Query: 553 CVHEAEDFINQMACDADIVVWKSLLA 578
++E +++ +VVW +L++
Sbjct: 662 RFADSETLFSELQYPKGLVVWTALIS 687
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 190/407 (46%), Gaps = 48/407 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+ A ++SAC++++ + G++ H ++ + +++MY KCG + AR F M
Sbjct: 513 SLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSM 572
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P RNVVS A+IAG + ++ E +AI L+ ++ G+ P + TF ++ C G + LGR
Sbjct: 573 PYRNVVSINALIAGYTMSHLE-EAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGR 631
Query: 157 QLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSK 214
Q+H V+K S + +L+ MY R D+ +FS + K + W ++I+ +++
Sbjct: 632 QIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQ 691
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------------- 254
+ +AL F + + P++ F SV AC+ + +
Sbjct: 692 QNHHEKAL-QFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEI 750
Query: 255 --------------------LFNEIDSPD-LASWNALIAGVASHSNANEAMSLFSEMRDR 293
+F+E+ + + SWN++I G+A + A EA+ +F +M +
Sbjct: 751 TCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQ 810
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCN 352
++PD +T +L AC + +G +V ++ V ++ + + L
Sbjct: 811 SIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNE 870
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
A +LG AD + W++++ AC +H R ++++ ++KP
Sbjct: 871 AEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAANKLM--ELKP 915
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
CLQH + + LF+ KP A + +L +H K G+
Sbjct: 33 CLQHCRRIQAHNLFNE------KPK-----------AVLQALSTAKVIHSKSLKIGVGLK 75
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
+ N ++D+Y+KCG++ A+K F+ +E DV +W+S++ Y G ++ F M +
Sbjct: 76 GLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWN 135
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHC-SCVVDLLARAGC 553
GV PN T VL+ACS + + G ++ + + +G R C ++D+ A+
Sbjct: 136 HGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGF---RSFCQGGLIDMYAKCRN 192
Query: 554 VHEAEDFINQMACDADIVVWKSLLA 578
+ +A + A + D V W +L+A
Sbjct: 193 LRDAR-LVFDGALNLDTVSWTTLIA 216
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 196/615 (31%), Positives = 320/615 (52%), Gaps = 45/615 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + LC + +AL+ D S + + TY L+ C R+ G +VH ++
Sbjct: 63 NSLILELCLKGDLEKALIHLD-SMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVS 121
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + V L N +L+M+ + G L +A F KM +R++ SW ++ G ++ ++A+
Sbjct: 122 KTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALN 181
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
LY +ML G+ P +TF +++ C GL + GR++H HVI+ S + NALI MY
Sbjct: 182 LYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I AR VF + R+D SW +MI+ + + LE L F M+ P+
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFF-MMREFFVDPDLMTMT 300
Query: 243 SVFSACS----------------------------------------NFARILFNEIDSP 262
SV SAC + A ++F++++
Sbjct: 301 SVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFK 360
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
DL SW A+I+G + +A+ ++ M ++PD +T+ S+L AC G L +G+ +H
Sbjct: 361 DLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLH 420
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ + G S V V N+++ MY+KC + AL VF + N + +SW SII + ++
Sbjct: 421 EFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRI-PNKNVISWTSIILGLRLNYRS 479
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
E F +M+ S +KP+ +T V+ ACA++ +L ++H + +TGL FD F+ N L
Sbjct: 480 FEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNAL 538
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y++CG + A FN E DV SW+ L+ GYAQ G G A++LF +M V+P+
Sbjct: 539 LDMYVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDE 597
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
+T +L ACS G+V +GL + ME+++ I P +H + VVDLL RAG + +A +FI
Sbjct: 598 ITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIK 657
Query: 563 QMACDADIVVWKSLL 577
+M D D +W +LL
Sbjct: 658 KMPIDPDPAIWGALL 672
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 161/313 (51%), Gaps = 7/313 (2%)
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
N+LI + + +A+ M++ ++ + T +LL C + +G +VHSY+ K
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
V + NA+L+M+ + L A VF ++ + D SWN ++ + +E
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAER-DLFSWNVLVGGYAKAGYFDEALN 181
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
L+ RML I+PD TF V+ C + L ++H ++ + G DV V+N L+ +Y+
Sbjct: 182 LYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
KCG + SAR +F+ M D +SW+++I GY + E L+LF MR V P+L+T+
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTS 301
Query: 508 VLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
V++AC +G G +H Y I + G + + ++ + + GC EAE ++M
Sbjct: 302 VISACEALGDERLGREVHGYVI---KTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKME 358
Query: 566 CDADIVVWKSLLA 578
D+V W ++++
Sbjct: 359 F-KDLVSWTAMIS 370
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 120/253 (47%), Gaps = 15/253 (5%)
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
+ F N+ L + + SVL + + +N +S+ I+ CL+ + + L
Sbjct: 30 LNFSRNIQTRQISLRKHHEISVLNPSSIT----AQNPNSL----ILELCLKGDLEKALIH 81
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
L S M Q+ + T+ ++ C + +++H Y++KT V + N L+ +++
Sbjct: 82 LDS-MQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFV 140
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
+ G L A +F M D+ SW+ L+ GYA+ G DEAL L+ RM +G+ P++ T
Sbjct: 141 RFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPC 200
Query: 508 VLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
VL C + + G +HL+ I YG + + ++ + + G + A ++M
Sbjct: 201 VLRTCGGLPDLARGREVHLHVI---RYGFESDVDVVNALITMYVKCGDIFSARLVFDRMP 257
Query: 566 CDADIVVWKSLLA 578
D + W ++++
Sbjct: 258 -RRDRISWNAMIS 269
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 196/615 (31%), Positives = 319/615 (51%), Gaps = 45/615 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + LC + +AL+ D S + + TY L+ C R+ G +VH ++
Sbjct: 63 NSLILELCLKGDLEKALIHLD-SMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVS 121
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + V L N +L+M+ + G L +A F KM +R++ SW ++ G ++ ++A+
Sbjct: 122 KTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALN 181
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
LY +ML G+ P +TF +++ C GL + GR++H HVI+ S + NALI MY
Sbjct: 182 LYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I AR VF + R+D SW +MI+ + + LE L F M+ P+
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFF-MMREFFVDPDLMTMT 300
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
SV SAC A ++F++++
Sbjct: 301 SVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFK 360
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
DL SW A+I+G + +A+ ++ M ++PD +T+ S+L AC G L +G+ +H
Sbjct: 361 DLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLH 420
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ + G S V V N+++ MY+KC + AL VF + N + +SW SII + ++
Sbjct: 421 EFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRI-PNKNVISWTSIILGLRLNYRS 479
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
E F +M+ S +KP+ +T V+ ACA++ +L ++H + +TGL FD F+ N L
Sbjct: 480 FEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNAL 538
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y++CG + A FN E DV SW+ L+ GYAQ G G A++LF +M V+P+
Sbjct: 539 LDMYVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDE 597
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
+T +L ACS G+V +GL + ME+++ I P +H + VVDLL RAG + +A +FI
Sbjct: 598 ITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIK 657
Query: 563 QMACDADIVVWKSLL 577
+M D D +W +LL
Sbjct: 658 KMPIDPDPAIWGALL 672
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 161/313 (51%), Gaps = 7/313 (2%)
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
N+LI + + +A+ M++ ++ + T +LL C + +G +VHSY+ K
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
V + NA+L+M+ + L A VF ++ + D SWN ++ + +E
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAER-DLFSWNVLVGGYAKAGYFDEALN 181
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
L+ RML I+PD TF V+ C + L ++H ++ + G DV V+N L+ +Y+
Sbjct: 182 LYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
KCG + SAR +F+ M D +SW+++I GY + E L+LF MR V P+L+T+
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTS 301
Query: 508 VLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
V++AC +G G +H Y I + G + + ++ + + GC EAE ++M
Sbjct: 302 VISACEALGDERLGREVHGYVI---KTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKME 358
Query: 566 CDADIVVWKSLLA 578
D+V W ++++
Sbjct: 359 F-KDLVSWTAMIS 370
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 199/593 (33%), Positives = 312/593 (52%), Gaps = 48/593 (8%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I P+ TY+ ISAC+ L +H IL + + + +++MY K +++AR
Sbjct: 37 IEPNAITYSATISACAQSTRPSLATSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEAR 96
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS----GVMPGQFTFGSIIKAC 146
FD MP+R+ VSW +MIAG SQ +A L+ M+ S ++ FT +++KAC
Sbjct: 97 FLFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKAC 156
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
GLG +G+ +H + +K S L + + MY K + A F I KD+ +W
Sbjct: 157 GGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWN 216
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------ARIL- 255
+MI +++ YE EA+ F +M G ++PN+ F V A + A++L
Sbjct: 217 TMITGYAQNCYEEEAIELFYQMELEG-FKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLK 275
Query: 256 -----------------------------FNEIDSPDLASWNALIAGVASHSNANEAMSL 286
F E+ +L S+NALI G + EA+ +
Sbjct: 276 LGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRV 335
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
+S+++ + PD T L +C T+ +G QVH + +K G DS+V V N+I+ Y+K
Sbjct: 336 YSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSK 395
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
C +AL F+ + + +SV W II+ Q+ + E+ F +M K D + +
Sbjct: 396 CGFTDSALEAFESINR-PNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSS 454
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
V+ A + A++E LH ++ K+GL ++V + ++D+Y KCG + A+K+F+ M +
Sbjct: 455 VIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKN 514
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
VVSW+S+I GYAQ G EAL LF M S G+ P VT VG+L ACSH GLVEEG + Y
Sbjct: 515 VVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYN 574
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+M + YGI P+ EHC+C+VDLL RAG + EAE F+ + + +W SLL++
Sbjct: 575 LMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSA 627
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 148/526 (28%), Positives = 258/526 (49%), Gaps = 48/526 (9%)
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M + NVV WT+ I ++ + A+ ++QML++G+ P T+ + I AC+ L
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
LH ++K + L + LI+MY+K DRI +AR +F + +D SW SMIA +S+
Sbjct: 61 TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120
Query: 216 GYELEALCHFNEMLH---------------------------------HG-----AYQPN 237
G EA F M++ HG + +
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180
Query: 238 EFIFGS-VFSACS----NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
F+ GS V+ C + A + F++I++ D+ +WN +I G A + EA+ LF +M
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMEL 240
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
P+ T +L A G H+ ++K+G +V V A++ MY+K + +
Sbjct: 241 EGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIED 300
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
F E+ K + VS+N++I + EE R++S++ + ++PD TF + +C+
Sbjct: 301 VERAFGEMSKR-NLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCS 359
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+++ Q+H + K GL DV V N +++ Y KCG SA + F + P+ V W+
Sbjct: 360 VSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAG 419
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENE 531
+I G+AQ G G++AL F +MR + + V+ A S VE+G HL+ +M++
Sbjct: 420 IISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKS- 478
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
G+ T S V+D+ ++ G V +A+ + M + ++V W S++
Sbjct: 479 -GLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMP-EKNVVSWNSMI 522
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 209/434 (48%), Gaps = 42/434 (9%)
Query: 25 SQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCG 84
S N + + T A ++ AC L ++G+ VH + + D+ + + MY KCG
Sbjct: 136 SCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCG 195
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
L+ A + FD++ +++V+W MI G +QN E +AI+L+ QM G P TF ++K
Sbjct: 196 ILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLK 255
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
A + + +GR HA V+K + AL+ MY+KF I D F ++++++ S
Sbjct: 256 ASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVS 315
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------- 249
+ ++I +S +G EAL ++++ G +P+ F F +FS+CS
Sbjct: 316 FNALITGYSLMGKYEEALRVYSQLQSEG-MEPDSFTFVGLFSSCSVSSTVAEGAQVHVHS 374
Query: 250 ----------------NF---------ARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
NF A F I+ P+ W +I+G A + +A+
Sbjct: 375 VKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKAL 434
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
F +MR D + S++ A + QG +H++++K G D + V +A++ MY
Sbjct: 435 MQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMY 494
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
+KC ++ +A VF + + + VSWNS+I Q+ +E LF M +S I P +TF
Sbjct: 495 SKCGMVEDAQKVFSVMPEK-NVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTF 553
Query: 405 NDVMGACAKMASLE 418
++ AC+ +E
Sbjct: 554 VGILFACSHAGLVE 567
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 178/413 (43%), Gaps = 42/413 (10%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN Y E + + + +T+ ++ A +++ +GR H +L C DV
Sbjct: 224 QNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVF 283
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ +++MY K +ED F +M +RN+VS+ A+I G S + +A+++Y Q+ G
Sbjct: 284 VATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEG 343
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
+ P FTF + +CS +V G Q+H H +K S + N+++ Y+K A
Sbjct: 344 MEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSAL 403
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF 251
F I R + W +I+ F++ G +AL F +M + +EF SV A S++
Sbjct: 404 EAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKF-IDKTDEFSSSSVIKAVSSW 462
Query: 252 ARI----------------------------------------LFNEIDSPDLASWNALI 271
A + +F+ + ++ SWN++I
Sbjct: 463 AAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMI 522
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII-KMGF 330
G A + EA+ LF EM +LP +T +L AC + +G ++ ++ G
Sbjct: 523 TGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGI 582
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
++ C ++ + + L A + + W S+++AC H ++
Sbjct: 583 PPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSD 635
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
M +VV W+S I A+ G D+AL F +M G+ PN +T ++AC+
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
L+ ++ + G S ++ + ++ + EA + M + D V W S++A
Sbjct: 61 TSLHCLILKK-GFSNQLFVSSGLISMYSKHDRIKEARFLFDDMP-ERDDVSWNSMIA 115
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 194/594 (32%), Positives = 305/594 (51%), Gaps = 46/594 (7%)
Query: 25 SQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCG 84
S N+N + Y ++ C+ +S++ GR+V I S D +L ++ MY KCG
Sbjct: 142 SSQNSNFDL--GAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCG 199
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
L++ RM FDK+ + + W MI+ S + ++I L+ QML+ G+ P +TF SI+K
Sbjct: 200 DLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILK 259
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
+ + V GRQ+H + K S+ N+LI+ Y ++ A+ +F + +DV S
Sbjct: 260 CFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVIS 319
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL--------- 255
W SMI+ + K G + + F +ML G + +VF AC+N +L
Sbjct: 320 WNSMISGYVKNGLDDRGIEIFIKMLVFGV-DIDLATMVNVFVACANIGTLLLGKVLHSYS 378
Query: 256 --------------------------------FNEIDSPDLASWNALIAGVASHSNANEA 283
F +D + SW ++I G ++ A
Sbjct: 379 IKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGA 438
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
+ LF EM+ R ++PD V S+L AC L G VH YI + ++N V NA+ M
Sbjct: 439 IKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDM 498
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
YAKC + +A VF + K D +SWN++I +++ E LF+ M + KPD T
Sbjct: 499 YAKCGSMKDAHDVFSHM-KKKDVISWNTMIGGYTKNSLPNEALTLFAEM-QRESKPDGTT 556
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
++ ACA +A+L+ ++H Y + G + D +V N ++D+Y+KCG L AR LF+ +
Sbjct: 557 VACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIP 616
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
N D+VSW+ +I GY G G EA+ F +MR G+ P+ V+ + +L ACSH GL++EG
Sbjct: 617 NKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWK 676
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
++ IM+ E I P EH +C+VDLLAR G + +A FI M D +W +LL
Sbjct: 677 IFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALL 730
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 190/592 (32%), Positives = 320/592 (54%), Gaps = 20/592 (3%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N +++L + EAL Y+ + P+ T A ++SAC ++ +L GR+ H
Sbjct: 109 NTVIAALARSERAGEALELYEGMLREGLV---PTHFTLASVLSACGAVAALDDGRRCHGL 165
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ ++ ++N +L MY KCG +EDA FD M N VS+TAM+ G Q +DA
Sbjct: 166 AVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDA 225
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSG--------LGSVCLGRQLHAHVIKSEHGSHLI 172
++L+ +M +SGV S++ +C+ + + LG+ +HA +++ GS
Sbjct: 226 LRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQH 285
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
N+LI MYTK ++ +A VF + SW +I F + G +AL N M G
Sbjct: 286 VGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESG 345
Query: 233 AYQPNEFIFGSVFSACSNF-----ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
+ +PNE + ++ ++C AR +F++I P + +WN L++G + + LF
Sbjct: 346 S-EPNEVTYSNMLASCIKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELF 404
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
M+ + + PD T+ +L +C L G QVHS ++ +++ V + ++ MY+KC
Sbjct: 405 RRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKC 464
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
+ A ++F + + D V WNS+I+ H+ EE F F +M + + P ++ +
Sbjct: 465 GQIGIARIIFNRMTER-DVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASM 523
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
+ +CA+++S+ Q+H I K G +V+V + L+D+Y KCG++ AR F+ M ++
Sbjct: 524 INSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNI 583
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
V+W+ +I GYAQ G G++A+ LF M + P+ VT + VLT CSH GLV+E + +
Sbjct: 584 VAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNS 643
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
ME+ YGI P EH +C++D L RAG + E E I+ M C D +VW+ LLA+
Sbjct: 644 MESTYGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAA 695
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/531 (26%), Positives = 262/531 (49%), Gaps = 31/531 (5%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
+P+ N L+ + G L+ AR D+MP RNVVSW +IA +++ + +A++LY
Sbjct: 71 RPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEG 130
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
ML+ G++P FT S++ AC + ++ GR+ H +K +L +NAL+ MYTK
Sbjct: 131 MLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGG 190
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+ DA +F G+A + S+ +M+ + G +AL F M G + + SV
Sbjct: 191 VEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGV-RVDPVAVSSVLG 249
Query: 247 ACSNFARILFNEIDS-----------------PDLASWNALIAGVASHSNANEAMSLFSE 289
+C+ F+ + + D N+LI +EA+ +F
Sbjct: 250 SCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDS 309
Query: 290 MRDRELLPDGLTVH-SLLCACIGRLTLY-QGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
LP+ TV ++L G+ Y + ++V + + + G + N + +L K
Sbjct: 310 ------LPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKA 363
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
+ +A +F ++ + + +WN++++ Q ++ LF RM ++PD T +
Sbjct: 364 RDVLSARAMFDKISRPS-VTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVI 422
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
+ +C+++ L++ TQ+H + L D+FV +GL+D+Y KCG +G AR +FN M DV
Sbjct: 423 LSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDV 482
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-R 526
V W+S+I G A +EA F +MR G+ P + ++ +C+ + V +G ++ +
Sbjct: 483 VCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQ 542
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
I+++ Y S ++D+ A+ G + +A F + M +IV W ++
Sbjct: 543 IVKDGYD--QNVYVGSALIDMYAKCGNMDDARVFFDCMVTK-NIVAWNEMI 590
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 158/313 (50%), Gaps = 9/313 (2%)
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASW 267
++ +S G +AL F + AY N + + + + AR L +E+ ++ SW
Sbjct: 49 LVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSW 108
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
N +IA +A A EA+ L+ M L+P T+ S+L AC L G + H +K
Sbjct: 109 NTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVK 168
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
+G D N+ V NA+L MY KC + +A+ +F + + + VS+ +++ +Q ++ R
Sbjct: 169 VGLDENLFVENALLGMYTKCGGVEDAVRLFDGMA-SPNEVSFTAMMGGLVQAGSVDDALR 227
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ--------LHCYITKTGLAFDVFVM 439
LF+RM S ++ D + + V+G+CA+ + E +H I + G D V
Sbjct: 228 LFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVG 287
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
N L+D+Y KC + A K+F+ + N VSW+ LI G+ Q G +AL++ M G
Sbjct: 288 NSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSE 347
Query: 500 PNLVTLVGVLTAC 512
PN VT +L +C
Sbjct: 348 PNEVTYSNMLASC 360
>gi|302796316|ref|XP_002979920.1| hypothetical protein SELMODRAFT_111891 [Selaginella moellendorffii]
gi|300152147|gb|EFJ18790.1| hypothetical protein SELMODRAFT_111891 [Selaginella moellendorffii]
Length = 719
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 201/564 (35%), Positives = 310/564 (54%), Gaps = 21/564 (3%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ PS T+ L+SAC+ L SL+ VHDHI S Q + +QN ++ MY +CGS+E+A+
Sbjct: 124 VSPSRITFLSLLSACTKLGSLREASLVHDHIRQSGNQQGLSIQNGVVCMYHRCGSVENAK 183
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS-GL 149
+ FD MP+R+V+SWT+MIA +Q+ +DAI+LY +M G P + TF + ++AC+ L
Sbjct: 184 LVFDAMPRRDVISWTSMIAAYAQSGSCDDAIRLYRRMELEGEKPNKVTFLAAMEACAKSL 243
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD-ARNVFSGIARKDVTSWGSM 208
LH VI+S + ++ AL+ MY K R L A+ +F G+ ++D W ++
Sbjct: 244 APEEEAEALHRCVIESGLETDVVVATALVNMYGKSARTLGRAQEIFDGVEKRDNVVWNAL 303
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS-----ACSNFARILFNEIDSPD 263
IAA+++ G AL E + +++ + + ++ + C+ A LF SP
Sbjct: 304 IAAYAQHGCRDRAL-DLLEQMQRQSFESDSIVRNALMNMYGKCGCAEDALRLFEA--SPR 360
Query: 264 LA---SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
L SWN +IA A + +M LF M+ + D T+ ++L AC L G
Sbjct: 361 LQNVISWNTVIAVHAQNGEHQRSMVLFHRMQLAGVPADRATLLTVLYACTNPAALRTGRI 420
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA----- 375
V + G+ V A++ M+AKC L A+ VF+ + + D+ SWN+++AA
Sbjct: 421 VRELATQRGYHHEVKFQTALVLMHAKCETLDAAVEVFESM-HHRDTPSWNAMVAAYGYHA 479
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
C + + +E F+L +M PD +T V+ ACA +++ +H + + GL D
Sbjct: 480 CSLNGRWKESFKLLQQMQVDGAVPDTVTLVTVLSACAAGSAIAKGRAVHRFAAENGLMSD 539
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
V V NG++D Y KCG L AR + + M D V+W+SL+ GYAQ G G E L+ FT M+
Sbjct: 540 VAVANGVVDFYGKCGCLLEARAVLDKMAKLDEVTWNSLLAGYAQHGYGVETLEAFTEMQH 599
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
G S N +T + VL ACSHVGLV EG + M +YG P EHC C++DLL RAG +
Sbjct: 600 RGYSANRITFMSVLHACSHVGLVAEGCKYFSSMIGDYGFQPIEEHCGCMIDLLGRAGHLS 659
Query: 556 EAEDFINQMACDADIVVWKSLLAS 579
EA+ + +M +++ W SLL S
Sbjct: 660 EAKMLLARMPFKPNLIAWMSLLGS 683
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 162/571 (28%), Positives = 265/571 (46%), Gaps = 85/571 (14%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
R VH+ C+ + ++ +LN YGKCG LE A F M +R+++SWTA+I G +Q
Sbjct: 47 RSVHECAREIHCEHEKIVATALLNAYGKCGDLESAGAIFRGMEERDLISWTALITGYAQF 106
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
A+ LY +ML GV P + TF S++ AC+ LGS+ +H H+ +S + L Q
Sbjct: 107 GHSRQALDLYREMLMDGVSPSRITFLSLLSACTKLGSLREASLVHDHIRQSGNQQGLSIQ 166
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
N ++ MY + + +A+ VF + R+DV SW SMIAA+++ G +A+ + M G
Sbjct: 167 NGVVCMYHRCGSVENAKLVFDAMPRRDVISWTSMIAAYAQSGSCDDAIRLYRRMELEGE- 225
Query: 235 QPNEFIFGSVFSACSN------------------------------------------FA 252
+PN+ F + AC+ A
Sbjct: 226 KPNKVTFLAAMEACAKSLAPEEEAEALHRCVIESGLETDVVVATALVNMYGKSARTLGRA 285
Query: 253 RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
+ +F+ ++ D WNALIA A H + A+ L +M+
Sbjct: 286 QEIFDGVEKRDNVVWNALIAAYAQHGCRDRALDLLEQMQ--------------------- 324
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
+ F+S+ V NA++ MY KC +AL +F+ + + +SWN++
Sbjct: 325 --------------RQSFESDSIVRNALMNMYGKCGCAEDALRLFEASPRLQNVISWNTV 370
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
IA Q+ + + LF RM + + D T V+ AC A+L + T+ G
Sbjct: 371 IAVHAQNGEHQRSMVLFHRMQLAGVPADRATLLTVLYACTNPAALRTGRIVRELATQRGY 430
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG-----DEAL 487
+V L+ ++ KC +L +A ++F M + D SW++++ Y C E+
Sbjct: 431 HHEVKFQTALVLMHAKCETLDAAVEVFESMHHRDTPSWNAMVAAYGYHACSLNGRWKESF 490
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
KL +M+ G P+ VTLV VL+AC+ + +G ++R E G++ + VVD
Sbjct: 491 KLLQQMQVDGAVPDTVTLVTVLSACAAGSAIAKGRAVHRFAA-ENGLMSDVAVANGVVDF 549
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ GC+ EA +++MA D V W SLLA
Sbjct: 550 YGKCGCLLEARAVLDKMA-KLDEVTWNSLLA 579
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 163/312 (52%), Gaps = 8/312 (2%)
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
+I A N +A +LF ++ +LP+ + + + L +C L +Q VH ++
Sbjct: 1 MITANAQSGNYTQAFALFQKLHVHGVLPNQIALVATLNSC---LADHQVRSVHECAREIH 57
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
+ V A+L Y KC L +A +F+ + + D +SW ++I Q + + L+
Sbjct: 58 CEHEKIVATALLNAYGKCGDLESAGAIFRGM-EERDLISWTALITGYAQFGHSRQALDLY 116
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
ML + P ITF ++ AC K+ SL + +H +I ++G + + NG++ +Y +C
Sbjct: 117 REMLMDGVSPSRITFLSLLSACTKLGSLREASLVHDHIRQSGNQQGLSIQNGVVCMYHRC 176
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
GS+ +A+ +F+ M DV+SW+S+I YAQ G D+A++L+ RM G PN VT + +
Sbjct: 177 GSVENAKLVFDAMPRRDVISWTSMIAAYAQSGSCDDAIRLYRRMELEGEKPNKVTFLAAM 236
Query: 510 TACSH-VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR-AGCVHEAEDFINQMACD 567
AC+ + EE L+R + E G+ + +V++ + A + A++ + +
Sbjct: 237 EACAKSLAPEEEAEALHRCV-IESGLETDVVVATALVNMYGKSARTLGRAQEIFDGVE-K 294
Query: 568 ADIVVWKSLLAS 579
D VVW +L+A+
Sbjct: 295 RDNVVWNALIAA 306
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 195/460 (42%), Gaps = 87/460 (18%)
Query: 107 MIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH--AHVIK 164
MI +Q+ A L+ ++ GV+P Q + + +C V R +H A I
Sbjct: 1 MITANAQSGNYTQAFALFQKLHVHGVLPNQIALVATLNSCLADHQV---RSVHECAREIH 57
Query: 165 SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCH 224
EH I AL+ Y K + A +F G+ +D+ SW ++I +++ G+ +AL
Sbjct: 58 CEHEK--IVATALLNAYGKCGDLESAGAIFRGMEERDLISWTALITGYAQFGHSRQALDL 115
Query: 225 FNEMLHHGAYQPNEFIFGSVFSACSNF--------------------------------- 251
+ EML G P+ F S+ SAC+
Sbjct: 116 YREMLMDGV-SPSRITFLSLLSACTKLGSLREASLVHDHIRQSGNQQGLSIQNGVVCMYH 174
Query: 252 -------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
A+++F+ + D+ SW ++IA A + ++A+ L+ M P+ +T +
Sbjct: 175 RCGSVENAKLVFDAMPRRDVISWTSMIAAYAQSGSCDDAIRLYRRMELEGEKPNKVTFLA 234
Query: 305 LLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCS-VLCNALLVFKELGK 362
+ AC L + + +H +I+ G +++V V A++ MY K + L A +F + K
Sbjct: 235 AMEACAKSLAPEEEAEALHRCVIESGLETDVVVATALVNMYGKSARTLGRAQEIFDGVEK 294
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
D+V WN++IAA QH + L +M + D I
Sbjct: 295 R-DNVVWNALIAAYAQHGCRDRALDLLEQMQRQSFESDSI-------------------- 333
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN-PDVVSWSSLILGYAQFG 481
V N LM++Y KCG A +LF +V+SW+++I +AQ G
Sbjct: 334 ---------------VRNALMNMYGKCGCAEDALRLFEASPRLQNVISWNTVIAVHAQNG 378
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
++ LF RM+ GV + TL+ VL AC++ + G
Sbjct: 379 EHQRSMVLFHRMQLAGVPADRATLLTVLYACTNPAALRTG 418
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 164/364 (45%), Gaps = 48/364 (13%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ-RNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ D +++N ++NMYGKCG EDA F+ P+ +NV+SW +IA +QN + ++ L+
Sbjct: 329 ESDSIVRNALMNMYGKCGCAEDALRLFEASPRLQNVISWNTVIAVHAQNGEHQRSMVLFH 388
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M +GV + T +++ AC+ ++ GR + + + + Q AL+ M+ K +
Sbjct: 389 RMQLAGVPADRATLLTVLYACTNPAALRTGRIVRELATQRGYHHEVKFQTALVLMHAKCE 448
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAF-----SKLGYELEALCHFNEMLHHGAYQPNEFI 240
+ A VF + +D SW +M+AA+ S G E+ +M GA P+
Sbjct: 449 TLDAAVEVFESMHHRDTPSWNAMVAAYGYHACSLNGRWKESFKLLQQMQVDGAV-PDTVT 507
Query: 241 FGSVFSACS-------------------------------NF---------ARILFNEID 260
+V SAC+ +F AR + +++
Sbjct: 508 LVTVLSACAAGSAIAKGRAVHRFAAENGLMSDVAVANGVVDFYGKCGCLLEARAVLDKMA 567
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D +WN+L+AG A H E + F+EM+ R + +T S+L AC + +G +
Sbjct: 568 KLDEVTWNSLLAGYAQHGYGVETLEAFTEMQHRGYSANRITFMSVLHACSHVGLVAEGCK 627
Query: 321 VHSYII-KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
S +I GF C ++ + + L A ++ + + ++W S++ +C H
Sbjct: 628 YFSSMIGDYGFQPIEEHCGCMIDLLGRAGHLSEAKMLLARMPFKPNLIAWMSLLGSCKVH 687
Query: 380 NQAE 383
E
Sbjct: 688 GNLE 691
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 200/616 (32%), Positives = 333/616 (54%), Gaps = 48/616 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS + LY+EA+ + + T + T+ LI AC+ + LG+ VH +
Sbjct: 178 NALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAV 237
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
D+ + N ++ +YGKCG L++A FDKMP++N++SW ++I G S+N +A +
Sbjct: 238 KMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYR 297
Query: 123 LYIQMLQSG--VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ +L+SG ++P T +++ CSG G+V +G +H +K L+ NALI M
Sbjct: 298 AFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDM 357
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA------------LCHFNEM 228
Y+K + +A +F I K V SW SMI A+S+ G+ E L NE+
Sbjct: 358 YSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEV 417
Query: 229 -------------------------LHHGAYQPNEFI---FGSVFSACSN--FARILFNE 258
L H ++Q E I F + ++ C + FA +F
Sbjct: 418 TILNLLPACLEESELLSLRALHGYSLRH-SFQYKELINNAFIAAYAKCGSLVFAEHVFFG 476
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ- 317
+++ ++SWNA+I G A + + +A+ + EM +LPD ++ SLL AC GRL L Q
Sbjct: 477 MNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLAC-GRLGLLQY 535
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G ++H ++++ G + N V ++L++Y CS F+ +G + +SV WN++++
Sbjct: 536 GKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMG-DKNSVCWNAMLSGYS 594
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
Q+ E LF +ML+ ++PD I ++GAC+++++L + ++HC+ K L D F
Sbjct: 595 QNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNF 654
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
V LMD+Y K G LG ++++FN + +V SW+ +I G+ G G++A++LF M+
Sbjct: 655 VACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSD 714
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
P+ T +GVL AC H GLV EGL+ M+ Y + P EH +CV+D+L RAG ++EA
Sbjct: 715 KQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEA 774
Query: 558 EDFINQMACDADIVVW 573
+FIN+M + D +W
Sbjct: 775 LNFINEMPEEPDAKIW 790
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 161/633 (25%), Positives = 295/633 (46%), Gaps = 71/633 (11%)
Query: 4 DYVSSLCKQNLYNEALVAYDFSQ----NNT--NIRIRPSTYAGLISACSSLRSLQLGRKV 57
+ +S LC+ N AL DF Q NN ++ R L+ C +++++GRK+
Sbjct: 73 EEISKLCEAGDLNGAL---DFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKL 129
Query: 58 HDHILLS-KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQ 116
+ + +S + D VL ++ MY CG ++R+ FD++ +N+ W A+++G +N
Sbjct: 130 DEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNEL 189
Query: 117 ENDAIKLYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
++AI +++++ + P FTF +IKAC+G + LG+ +H +K L N
Sbjct: 190 YDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGN 249
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG-AY 234
A+IA+Y K + +A +F + +++ SW S+I FS+ G+ LEA F +L G
Sbjct: 250 AMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGL 309
Query: 235 QPNEFIFGSVFSACS----------------------------------------NFARI 254
P+ ++ CS + A I
Sbjct: 310 IPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAI 369
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLP-DGLTVHSLLCACIGR 312
LF +I++ + SWN++I + E L +M + EL+ + +T+ +LL AC+
Sbjct: 370 LFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEE 429
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV-SWNS 371
L +H Y ++ F + NA + YAKC L A VF G N SV SWN+
Sbjct: 430 SELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVF--FGMNTKSVSSWNA 487
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+I Q+ + + M I PD + ++ AC ++ L+ ++H ++ + G
Sbjct: 488 VIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNG 547
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
L + FV L+ +Y C R F M + + V W++++ GY+Q +EAL LF
Sbjct: 548 LEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFR 607
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY------RIMENEYGIIPTREHCSCVV 545
+M S G+ P+ + + +L ACS + + G ++ +ME+ + CS ++
Sbjct: 608 QMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNF------VACS-LM 660
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
D+ A++G + ++ N++ ++ W ++
Sbjct: 661 DMYAKSGFLGHSQRIFNRLN-GKEVASWNVMIT 692
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 138/256 (53%), Gaps = 12/256 (4%)
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
F + + ++TMY+ C + LVF L N + WN++++ +++ +E F
Sbjct: 139 FSGDFVLNTRLITMYSICGYPLESRLVFDRL-LNKNLFQWNALVSGYVRNELYDEAIHTF 197
Query: 390 SRMLA-SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
+++ ++ +PD+ TF ++ AC + + +H K GL D+FV N ++ +Y K
Sbjct: 198 LELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGK 257
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL-----GVSPNLV 503
CG L A +LF+ M +++SW+SLI G+++ G EA + F RSL G+ P++
Sbjct: 258 CGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAF---RSLLESGDGLIPDVA 314
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
T+V +L CS G V+ G+ ++ M + G++ C+ ++D+ ++ GC+ EA +
Sbjct: 315 TMVTLLPVCSGEGNVDVGMVIHG-MAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRK 373
Query: 564 MACDADIVVWKSLLAS 579
+ + +V W S++ +
Sbjct: 374 IE-NKSVVSWNSMIGA 388
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 200/584 (34%), Positives = 308/584 (52%), Gaps = 43/584 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY +++A +S +L+ ++VH H + + D+ + N +++MY K GS++DAR+ FD M
Sbjct: 322 TYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGM 381
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG- 155
+R++ SWT MI G +Q+ + +A L++QM ++G +P T+ SI+ A + + L
Sbjct: 382 TERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEW 441
Query: 156 -RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
+ +H H ++ S L NALI MY K I DAR VF G+ +DV SW +M+ ++
Sbjct: 442 VKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQ 501
Query: 215 LGYELEALCHFNEMLH----------------HGAYQPNEFI------------------ 240
G EA F +M HG+ E++
Sbjct: 502 NGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRV 561
Query: 241 ---FGSVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
F ++ C + AR+LF+++ + +WNA+I G A EA+SLF +M+
Sbjct: 562 GSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGF 621
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
+PD T ++L A + L +VHS+ G ++ V NA++ Y+KC + A
Sbjct: 622 IPDATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQ 680
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF ++ + + +W +I QH + F F +ML I PD T+ ++ ACA
Sbjct: 681 VFDDMVER-NVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTG 739
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+LE V ++H + GL D+ V N L+ +Y KCGS+ AR +F+ M DV SW+ +I
Sbjct: 740 ALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIG 799
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
G AQ G G EAL F +M+S G PN + V VLTACSH GLV+EG + M +YGI
Sbjct: 800 GLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIE 859
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
PT EH +C+VDLL RAG + EAE FI M + D W +LL +
Sbjct: 860 PTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGA 903
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 168/593 (28%), Positives = 297/593 (50%), Gaps = 53/593 (8%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I I +Y ++ C + L ++VH I+ S + ++ + N +L +Y +CG L+ AR
Sbjct: 114 IAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCAR 173
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FDK+ ++N+ WT MI G ++ DA+++Y +M Q P + T+ SI+KAC
Sbjct: 174 QVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPV 233
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G+++HAH+I+S S + + AL+ MY K I DA+ +F + ++V SW MI
Sbjct: 234 NLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIG 293
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------- 249
+ G EA F +M G + PN + + S+ +A +
Sbjct: 294 GLAHYGRGQEAFHLFLQMQREG-FIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLA 352
Query: 250 -------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ AR++F+ + D+ SW +I G+A H EA SLF +M
Sbjct: 353 LDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQM 412
Query: 291 RDRELLPDGLTVHSLLCA-CIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+ LP+ T S+L A I + + ++ VH + + GF S++ + NA++ MYAKC
Sbjct: 413 QRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCG 472
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ +A LVF + + D +SWN+++ Q+ E F +F +M + PD T+ ++
Sbjct: 473 SIDDARLVFDGMC-DRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLL 531
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
+LE V ++H + +TGL D V + + +YI+CGS+ AR LF+ + V
Sbjct: 532 NTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVT 591
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
+W+++I G AQ CG EAL LF +M+ G P+ T + +L+A + EE L + +
Sbjct: 592 TWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSA----NVDEEALEWVKEV 647
Query: 529 EN---EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ + G++ R + +V ++ G V A+ + M + ++ W ++
Sbjct: 648 HSHATDAGLVDLRV-GNALVHTYSKCGNVKYAKQVFDDMV-ERNVTTWTMMIG 698
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 130/505 (25%), Positives = 243/505 (48%), Gaps = 50/505 (9%)
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
DA+ + +Q G+ F++ +I++ C + L +Q+H +IKS +L N L
Sbjct: 100 KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL 159
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
+ +Y + R+ AR VF + +K++ W +MI +++ G+ +A+ +++M QPN
Sbjct: 160 LRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECG-QPN 218
Query: 238 EFIFGSVFSAC------------------SNF----------------------ARILFN 257
E + S+ AC S F A+++F+
Sbjct: 219 EITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFD 278
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
++ ++ SW +I G+A + EA LF +M+ +P+ T S+L A L
Sbjct: 279 KMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEW 338
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
+VHS+ + G ++ V NA++ MYAK + +A +VF + + D SW +I
Sbjct: 339 VKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTER-DIFSWTVMIGGLA 397
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC--AKMASLEMVTQLHCYITKTGLAFD 435
QH + +E F LF +M + P+ T+ ++ A A ++LE V +H + + G D
Sbjct: 398 QHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISD 457
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
+ + N L+ +Y KCGS+ AR +F+ M + DV+SW++++ G AQ GCG EA +F +M+
Sbjct: 458 LRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQ 517
Query: 496 LGVSPNLVTLVGVLTACSHVGLVE--EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
G+ P+ T + +L +E +H + + E G+I S + + R G
Sbjct: 518 EGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAV---ETGLISDFRVGSAFIHMYIRCGS 574
Query: 554 VHEAEDFINQMACDADIVVWKSLLA 578
+ +A ++++ + W +++
Sbjct: 575 IDDARLLFDKLSV-RHVTTWNAMIG 598
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 213/492 (43%), Gaps = 109/492 (22%)
Query: 36 STYAGLI--SACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
+TY ++ SA +S +L+ + VH H + D+ + N +++MY KCGS++DAR+ F
Sbjct: 422 TTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVF 481
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
D M R+V+SW AM+ G +QN ++A +++QM Q G++P T+ S++ ++
Sbjct: 482 DGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALE 541
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
++H H +++ S +A I MY + I DAR +F ++ + VT+W +MI +
Sbjct: 542 WVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAA 601
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA-------------------------- 247
+ EAL F +M G + P+ F ++ SA
Sbjct: 602 QQRCGREALSLFLQMQREG-FIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLR 660
Query: 248 -----------CSN--FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
C N +A+ +F+++ ++ +W +I G+A H ++A S F +M
Sbjct: 661 VGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREG 720
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
++PD T S+L AC L +VH++ + G S++ V NA++ MYAKC + +A
Sbjct: 721 IVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDAR 780
Query: 355 LVFKEL----------------------------------GKNADSVSWNSIIAACLQHN 380
VF ++ G + S+ +++ AC
Sbjct: 781 SVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAG 840
Query: 381 QAEELFRLFSRM---------------------------------LASQIKPDHITFNDV 407
+E R F M L I+PD + +
Sbjct: 841 LVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGAL 900
Query: 408 MGACAKMASLEM 419
+GAC +LEM
Sbjct: 901 LGACVTYGNLEM 912
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 161/315 (51%), Gaps = 7/315 (2%)
Query: 268 NALIAGVASHSN----ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
NA + G A ++ A +A+++ + + D + ++L C+ + + QVH
Sbjct: 83 NASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHV 142
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
IIK G + N+ V N +L +Y +C L A VF +L K + W ++I ++ AE
Sbjct: 143 CIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYI-WTTMIGGYAEYGHAE 201
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
+ R++ +M +P+ IT+ ++ AC +L+ ++H +I ++G DV V L+
Sbjct: 202 DAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALV 261
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
++Y+KCGS+ A+ +F+ M +V+SW+ +I G A +G G EA LF +M+ G PN
Sbjct: 262 NMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSY 321
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
T V +L A + G +E ++ N G+ + +V + A++G + +A +
Sbjct: 322 TYVSILNANASAGALEWVKEVHSHAVNA-GLALDLRVGNALVHMYAKSGSIDDARVVFDG 380
Query: 564 MACDADIVVWKSLLA 578
M + DI W ++
Sbjct: 381 MT-ERDIFSWTVMIG 394
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 200/616 (32%), Positives = 333/616 (54%), Gaps = 48/616 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS + LY+EA+ + + T + T+ LI AC+ + LG+ VH +
Sbjct: 178 NALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAV 237
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
D+ + N ++ +YGKCG L++A FDKMP++N++SW ++I G S+N +A +
Sbjct: 238 KMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYR 297
Query: 123 LYIQMLQSG--VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ +L+SG ++P T +++ CSG G+V +G +H +K L+ NALI M
Sbjct: 298 AFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDM 357
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA------------LCHFNEM 228
Y+K + +A +F I K V SW SMI A+S+ G+ E L NE+
Sbjct: 358 YSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEV 417
Query: 229 -------------------------LHHGAYQPNEFI---FGSVFSACSN--FARILFNE 258
L H ++Q E I F + ++ C + FA +F
Sbjct: 418 TILNLLPACLEESELLSLRALHGYSLRH-SFQYKELINNAFIAAYAKCGSLVFAEHVFFG 476
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ- 317
+++ ++SWNA+I G A + + +A+ + EM +LPD ++ SLL AC GRL L Q
Sbjct: 477 MNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLAC-GRLGLLQY 535
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G ++H ++++ G + N V ++L++Y CS F+ +G + +SV WN++++
Sbjct: 536 GKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMG-DKNSVCWNAMLSGYS 594
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
Q+ E LF +ML+ ++PD I ++GAC+++++L + ++HC+ K L D F
Sbjct: 595 QNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNF 654
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
V LMD+Y K G LG ++++FN + +V SW+ +I G+ G G++A++LF M+
Sbjct: 655 VACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSD 714
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
P+ T +GVL AC H GLV EGL+ M+ Y + P EH +CV+D+L RAG ++EA
Sbjct: 715 KQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEA 774
Query: 558 EDFINQMACDADIVVW 573
+FIN+M + D +W
Sbjct: 775 LNFINEMPEEPDAKIW 790
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 161/633 (25%), Positives = 295/633 (46%), Gaps = 71/633 (11%)
Query: 4 DYVSSLCKQNLYNEALVAYDFSQ----NNT--NIRIRPSTYAGLISACSSLRSLQLGRKV 57
+ +S LC+ N AL DF Q NN ++ R L+ C +++++GRK+
Sbjct: 73 EEISKLCEAGDLNGAL---DFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKL 129
Query: 58 HDHILLS-KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQ 116
+ + +S + D VL ++ MY CG ++R+ FD++ +N+ W A+++G +N
Sbjct: 130 DEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNEL 189
Query: 117 ENDAIKLYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
++AI +++++ + P FTF +IKAC+G + LG+ +H +K L N
Sbjct: 190 YDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGN 249
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG-AY 234
A+IA+Y K + +A +F + +++ SW S+I FS+ G+ LEA F +L G
Sbjct: 250 AMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGL 309
Query: 235 QPNEFIFGSVFSACS----------------------------------------NFARI 254
P+ ++ CS + A I
Sbjct: 310 IPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAI 369
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLP-DGLTVHSLLCACIGR 312
LF +I++ + SWN++I + E L +M + EL+ + +T+ +LL AC+
Sbjct: 370 LFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEE 429
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV-SWNS 371
L +H Y ++ F + NA + YAKC L A VF G N SV SWN+
Sbjct: 430 SELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVF--FGMNTKSVSSWNA 487
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+I Q+ + + M I PD + ++ AC ++ L+ ++H ++ + G
Sbjct: 488 VIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNG 547
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
L + FV L+ +Y C R F M + + V W++++ GY+Q +EAL LF
Sbjct: 548 LEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFR 607
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY------RIMENEYGIIPTREHCSCVV 545
+M S G+ P+ + + +L ACS + + G ++ +ME+ + CS ++
Sbjct: 608 QMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNF------VACS-LM 660
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
D+ A++G + ++ N++ ++ W ++
Sbjct: 661 DMYAKSGFLGHSQRIFNRLN-GKEVASWNVMIT 692
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 138/256 (53%), Gaps = 12/256 (4%)
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
F + + ++TMY+ C + LVF L N + WN++++ +++ +E F
Sbjct: 139 FSGDFVLNTRLITMYSICGYPLESRLVFDRL-LNKNLFQWNALVSGYVRNELYDEAIHTF 197
Query: 390 SRMLA-SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
+++ ++ +PD+ TF ++ AC + + +H K GL D+FV N ++ +Y K
Sbjct: 198 LELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGK 257
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL-----GVSPNLV 503
CG L A +LF+ M +++SW+SLI G+++ G EA + F RSL G+ P++
Sbjct: 258 CGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAF---RSLLESGDGLIPDVA 314
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
T+V +L CS G V+ G+ ++ M + G++ C+ ++D+ ++ GC+ EA +
Sbjct: 315 TMVTLLPVCSGEGNVDVGMVIHG-MAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRK 373
Query: 564 MACDADIVVWKSLLAS 579
+ + +V W S++ +
Sbjct: 374 IE-NKSVVSWNSMIGA 388
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 182/556 (32%), Positives = 307/556 (55%), Gaps = 15/556 (2%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T A ++SAC L +L GR+ H + + ++N +L MY KCGS+ DA F M
Sbjct: 143 TLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGM 202
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC--------SG 148
+ N VS+TAM+ G +Q +DA++L+ +M +SGV + S++ AC S
Sbjct: 203 ARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSV 262
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+ LG+ +HA V++ GS N+LI MYTK + +A VF + + SW +
Sbjct: 263 ARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNIL 322
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-----SNFARILFNEIDSPD 263
I F + G +A+ ++ ++PNE + ++ ++C + AR +F++I P
Sbjct: 323 ITGFGQEGSCAKAV-EVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPS 381
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+ +WN L++G + + LF M+ + + PD T+ +L +C L G QVHS
Sbjct: 382 VTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHS 441
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
++ +++ V + ++ MY+KC + A +F ++ + D V WNSII+ H+ +
Sbjct: 442 ASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTER-DVVCWNSIISGLTIHSLNK 500
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
E F F +M + I P ++ ++ +C++++S+ Q+H + K G +V+V + L+
Sbjct: 501 EAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALI 560
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
D+Y KCG++ AR F+ M ++V+W+ +I GYAQ G GD+A++LF M + P+ V
Sbjct: 561 DMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAV 620
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
T + VLT CSH GLV++ + + MEN YGIIP EH +C++D L RAG E E I++
Sbjct: 621 TFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHK 680
Query: 564 MACDADIVVWKSLLAS 579
M C D ++W+ LLA+
Sbjct: 681 MPCKDDPIIWEVLLAA 696
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 144/559 (25%), Positives = 254/559 (45%), Gaps = 88/559 (15%)
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN-DAIKLYIQ 126
P+ N L+ + G L+ AR MP+RN VSW +I+ +++ + +A+++Y +
Sbjct: 72 PNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYGR 131
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M G++P FT S++ AC GL ++ GR+ H +K ++ +NAL+ MYTK
Sbjct: 132 MRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGS 191
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG-------------- 232
+ DA +F G+AR + S+ +M+ ++ G +AL F M G
Sbjct: 192 VGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGA 251
Query: 233 -------------AYQPNEFI--------FGS----------VFSACSNF--ARILFNEI 259
A++ + I FGS +++ C A +F +
Sbjct: 252 CAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESL 311
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
S + SWN LI G + +A+ + S M++ P+ +T +LL +CI +
Sbjct: 312 PSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCI------KAR 365
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
VHS A+ ++ SV +WN++++ Q
Sbjct: 366 DVHS-------------ARAMFDKISRPSV-----------------TTWNTLLSGYCQE 395
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
Q ++ LF RM ++PD T ++ +C+K+ L+ Q+H + L D+FV
Sbjct: 396 EQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVA 455
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
+GL+D+Y KCG +G AR +FN M DVV W+S+I G EA F +MR G+
Sbjct: 456 SGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIM 515
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAE 558
P + ++ +CS + + G ++ ++M++ Y S ++D+ A+ G + +A
Sbjct: 516 PTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYD--QNVYVGSALIDMYAKCGNMDDAR 573
Query: 559 DFINQMACDADIVVWKSLL 577
F + M +IV W ++
Sbjct: 574 LFFDTMMMK-NIVAWNEMI 591
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 162/319 (50%), Gaps = 20/319 (6%)
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFNEIDSP 262
++ +S+ G AL F + PN++ + + SA + AR L +
Sbjct: 49 LVELYSRAGLPRHALLAFRALP-----SPNDYSYNAALSAACRAGDLDAARDLLGGMPRR 103
Query: 263 DLASWNALIAGVA-SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
+ SWN +I+ +A S + EA+ ++ MR LLP T+ S+L AC G L G +
Sbjct: 104 NAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRC 163
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H +K+G D+N V NA+L MY KC + +A+ +F + + + VS+ +++ Q
Sbjct: 164 HGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMAR-PNEVSFTAMMGGLAQTGS 222
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE--------MVTQLHCYITKTGLA 433
++ RLF+RM S + D ++ + V+GACA+ + + + +H + + G
Sbjct: 223 IDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFG 282
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
D V N L+D+Y KC + A K+F + + +VSW+ LI G+ Q G +A+++ + M
Sbjct: 283 SDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLM 342
Query: 494 RSLGVSPNLVTLVGVLTAC 512
+ G PN VT +L +C
Sbjct: 343 QEAGFEPNEVTYSNLLASC 361
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 164/318 (51%), Gaps = 15/318 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S C++ + + + + Q+ N++ +T A ++S+CS L L GR+VH +
Sbjct: 386 NTLLSGYCQEEQHQDTIELFRRMQHQ-NVQPDRTTLAVILSSCSKLGILDFGRQVHSASV 444
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
D+ + + +++MY KCG + AR F+KM +R+VV W ++I+G + + +A
Sbjct: 445 RFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFD 504
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ QM ++G+MP + ++ S+I +CS L S+ GRQ+HA V+K + ++ +ALI MY
Sbjct: 505 FFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYA 564
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + DAR F + K++ +W MI +++ G +A+ F ML +P+ F
Sbjct: 565 KCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTT-EQKPDAVTFI 623
Query: 243 SVFSACS-----NFARILFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEMRD 292
+V + CS + A FN +++ P + LI + E +L +M
Sbjct: 624 AVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPC 683
Query: 293 RELLPDGLTVHSLLCACI 310
++ D + LL AC+
Sbjct: 684 KD---DPIIWEVLLAACV 698
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 168/382 (43%), Gaps = 73/382 (19%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
+P+ V +++L K + AR FDK+ + +V +W +++G Q Q D I+L+ +
Sbjct: 348 EPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRR 407
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M V P + T I+ +CS LG + GRQ+H+ ++ + + + L+ MY+K +
Sbjct: 408 MQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQ 467
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
I AR++F+ + +DV W S+I+ + EA F +M +G P E + S+ +
Sbjct: 468 IGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENG-IMPTESSYASMIN 526
Query: 247 ACSNF----------------------------------------ARILFNEIDSPDLAS 266
+CS AR+ F+ + ++ +
Sbjct: 527 SCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVA 586
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WN +I G A + ++A+ LF M E PD +T ++L C HS ++
Sbjct: 587 WNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGC-----------SHSGLV 635
Query: 327 K--MGFDSNVPVCNAILTMYAKCSVLCNAL-----------LVFKELGKNADSVSWNSII 373
M F +++ I+ + + L +AL L+ K K+ D + W ++
Sbjct: 636 DKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKD-DPIIWEVLL 694
Query: 374 AACLQHNQ-------AEELFRL 388
AAC+ H+ AE LFR+
Sbjct: 695 AACVVHHNAELGKCAAEHLFRI 716
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 198/583 (33%), Positives = 307/583 (52%), Gaps = 47/583 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPD--VVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
++ C+ S++ + VH +L S + +VL NH ++Y KC A FD+MPQ
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
RNV SWT MI G +++ D K + +ML SG++P +F + +II++C GL S+ LG+ +
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 243
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
HA ++ +H+ +L+ MY K I D+ VF+ + + SW +MI+ + G
Sbjct: 244 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 303
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSV---------------------------------- 244
LEA F M +GA PN + SV
Sbjct: 304 LEAFDLFVRM-KNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTA 362
Query: 245 ----FSACSNF--ARILF--NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+S C + AR +F N I+ WNA+I+G + + EA+ L+ +M +
Sbjct: 363 LIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGIT 422
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD-SNVPVCNAILTMYAKCSVLCNALL 355
D T S+ A +L G VH ++K G D V V NAI Y+KC L +
Sbjct: 423 SDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRK 482
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF + + D VSW +++ A Q + EE F M P+ TF+ V+ +CA +
Sbjct: 483 VFDRM-EERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLC 541
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
LE Q+H + K GL + + + L+D+Y KCGS+ A K+F+ + NPD+VSW+++I
Sbjct: 542 FLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIIS 601
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
GYAQ G ++AL+LF RM G+ N VTL+ VL ACSH G+VEEGL ++ ME+ YG++
Sbjct: 602 GYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVV 661
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
P EH +C++DLL R G + +A +FI +M + + +VW++LL
Sbjct: 662 PEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLG 704
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 156/556 (28%), Positives = 255/556 (45%), Gaps = 62/556 (11%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
N+ I Y+ +I +C L SL+LG+ VH I++ + + +LNMY K GS+E
Sbjct: 214 NSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIE 273
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
D+ F+ M + N VSW AMI+GC+ N +A L+++M P +T S+ KA
Sbjct: 274 DSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVG 333
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG--IARKDVTSW 205
L V +G+++ + +++ ALI MY+K + DAR+VF I T W
Sbjct: 334 KLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPW 393
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARI------ 254
+MI+ +S+ G EAL + +M +G + + + SVF+A + F R+
Sbjct: 394 NAMISGYSQSGCSQEALELYVQMCQNGI-TSDLYTYCSVFNAIAASKSLQFGRVVHGMVL 452
Query: 255 ------------------------------LFNEIDSPDLASWNALIAGVASHSNANEAM 284
+F+ ++ D+ SW L+ + S EA+
Sbjct: 453 KCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEAL 512
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
+ F MR+ P+ T S+L +C L G QVH + K G D+ + +A++ MY
Sbjct: 513 ATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMY 572
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
AKC + A VF ++ N D VSW +II+ QH E+ +LF RM S IK + +T
Sbjct: 573 AKCGSITEAGKVFDKI-SNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTL 631
Query: 405 NDVMGACAKMASLEMVTQLHCYITKT----GLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
V+ AC+ MV + Y + G+ ++ ++D+ + G L A +
Sbjct: 632 LCVLFACSHGG---MVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIR 688
Query: 461 FME-NPDVVSWSSLILGYAQFGC---GDEALKLFTRMRSLGVSPNL-VTLVGVLTACSHV 515
M P+ + W +L LG GC G+ L + L + P T V +
Sbjct: 689 KMPMEPNEMVWQTL-LG----GCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIET 743
Query: 516 GLVEEGLHLYRIMENE 531
G E+GL L +M+++
Sbjct: 744 GSYEDGLSLRNVMKDQ 759
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 174/351 (49%), Gaps = 28/351 (7%)
Query: 244 VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
V+S CS F A +F+E+ ++ SW +I G H + F EM + +LPD
Sbjct: 164 VYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFA 223
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
+++ +CIG +L G VH+ I+ GF +++ V ++L MYAK + ++ VF +
Sbjct: 224 YSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT 283
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
++ + VSWN++I+ C + E F LF RM P+ T V A K+ + M
Sbjct: 284 EH-NQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGK 342
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF--NFMENPDVVSWSSLILGYAQ 479
++ ++ G+ +V V L+D+Y KCGSL AR +F NF+ W+++I GY+Q
Sbjct: 343 EVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQ 402
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS-----------HVGLVEEGLHLYRIM 528
GC EAL+L+ +M G++ +L T V A + H +++ GL L +
Sbjct: 403 SGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVS 462
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
N + + D ++ G + + ++M + DIV W +L+ +
Sbjct: 463 VN-----------NAIADAYSKCGFLEDVRKVFDRME-ERDIVSWTTLVTA 501
>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 1441
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 196/619 (31%), Positives = 316/619 (51%), Gaps = 45/619 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S K+ EA +++ T ++ S+ ++SA +SL L G VH
Sbjct: 278 NVMISGHAKRGFAEEA-ISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAT 336
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+V + + ++NMY KC ++ A+ F+ + +RN+V W AM+ G +QN + ++
Sbjct: 337 KEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVME 396
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ M + G P +FTF SI AC+ L + G QLH +IK++ S+L NAL+ MY
Sbjct: 397 FFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYA 456
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + +AR F + D SW ++I + + Y EA F M+ +G P+E
Sbjct: 457 KSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVL-PDEVSLA 515
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
S+ SAC+N AR +F + S
Sbjct: 516 SIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSR 575
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
++ S NALIAG + + EA+ LF E++ L P +T LL C G L G Q+H
Sbjct: 576 NVVSVNALIAGY-TMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIH 634
Query: 323 SYIIKMGF-DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
++K GF S+ VC ++L +Y ++ +F EL V W ++I+ Q N
Sbjct: 635 GQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNH 694
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
E+ + + M + I PD F V+ ACA M+SL+ ++H I TG D +
Sbjct: 695 HEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSS 754
Query: 442 LMDIYIKCGSLGSARKLFNFM-ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+D+Y KCG + + ++F M +V+SW+S+I+G A+ G +EAL++F +M + P
Sbjct: 755 LIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIP 814
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ VT +GVL+ACSH G V EG ++ +M N Y ++P +H C+VD+L R G ++EAE+F
Sbjct: 815 DEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLPRVDHLGCMVDILGRWGFLNEAEEF 874
Query: 561 INQMACDADIVVWKSLLAS 579
IN++ C AD ++W +LL +
Sbjct: 875 INKLGCKADPMLWSTLLGA 893
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 277/522 (53%), Gaps = 8/522 (1%)
Query: 48 LRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAM 107
L++L + +H L +L N I+++Y KCG+++ A+ F ++ +++V +W ++
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 108 IAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
++ + ++ ++ M V P +FTF ++ ACSGL V GRQ+H V K+
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
G Q LI MY K + DAR VF G D SW ++IA + + G+ +EA+ F+
Sbjct: 174 GFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDR 233
Query: 228 MLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANE 282
M G + P++ +V +A R+ LF +I +P++ +WN +I+G A A E
Sbjct: 234 MQRVG-HAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEE 292
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
A+S F E++ L ++ S+L A L G VH+ K G D NV V +A++
Sbjct: 293 AISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVN 352
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
MYAKCS + A VF LG+ + V WN+++ Q+ A+E+ FS M +PD
Sbjct: 353 MYAKCSKMDAAKQVFNSLGER-NIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEF 411
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
TF + ACA + L QLH + K A ++FV N L+D+Y K G+L ARK F M
Sbjct: 412 TFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELM 471
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
+ D VSW+++I+GY Q DEA +F RM S GV P+ V+L +++AC++V ++ G
Sbjct: 472 KIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQ 531
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
+ ++ + G+ + S ++D+ + G V A D M
Sbjct: 532 QCHCLLV-KVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSM 572
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 170/566 (30%), Positives = 298/566 (52%), Gaps = 30/566 (5%)
Query: 30 NIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
N +RP+ T+A ++SACS L+ + GR+VH + + Q +++MY KC L
Sbjct: 135 NHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLR 194
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
DAR+ FD + VSWTA+IAG ++ +A+K++ +M + G P Q T +++ A
Sbjct: 195 DARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYV 254
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV----T 203
LG + R+L + +++A N +I+ + K +A + F + + + +
Sbjct: 255 ALGRLADARKLFTQIPN----PNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRS 310
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP---NEFIFGS----VFSACSNF--ARI 254
S GS+++A + L ++ ++ M+H A + + GS +++ CS A+
Sbjct: 311 SLGSVLSAIASL-----SMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQ 365
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+FN + ++ WNA++ G A + A E M FS M+ PD T S+ AC
Sbjct: 366 VFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHY 425
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
L G Q+H+ +IK F SN+ V NA++ MYAK L A F EL K D+VSWN+II
Sbjct: 426 LNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQF-ELMKIHDNVSWNAIIV 484
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
+Q +E F +F RM+++ + PD ++ ++ ACA + L+ Q HC + K GL
Sbjct: 485 GYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDT 544
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
+ L+D+Y+KCG + +AR +F M + +VVS ++LI GY G +EA+ LF ++
Sbjct: 545 STCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYT-MGHLEEAIHLFQEIQ 603
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREH-CSCVVDLLARAG 552
+G+ P VT G+L C ++ G ++ ++M ++G + + E C ++ L +
Sbjct: 604 MVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVM--KWGFLSSSEMVCVSLLCLYMNSQ 661
Query: 553 CVHEAEDFINQMACDADIVVWKSLLA 578
++E +++ +VVW +L++
Sbjct: 662 RFVDSETLFSELQYPKGLVVWTALIS 687
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 205/470 (43%), Gaps = 81/470 (17%)
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
L ++ + +H+ +K G + N ++ +Y K + A+ FS + +KDV +W S+
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NF------------ 251
++ + G + F M +H +PNEF F V SACS NF
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNH-EVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTG 172
Query: 252 -----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
AR++F+ + D SW ALIAG EA+ +F
Sbjct: 173 FGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFD 232
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
M+ PD +T+ V V NA Y
Sbjct: 233 RMQRVGHAPDQITL-------------------------------VTVVNA----YVALG 257
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
L +A +F ++ N + V+WN +I+ + AEE F + + +K + V+
Sbjct: 258 RLADARKLFTQI-PNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVL 316
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
A A ++ L + +H TK GL +V+V + L+++Y KC + +A+++FN + ++V
Sbjct: 317 SAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIV 376
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
W++++ G+AQ G E ++ F+ M+ G P+ T + +AC+ + + G L+ +M
Sbjct: 377 LWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVM 436
Query: 529 -ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+N++ + +VD+ A++G + EA M D V W +++
Sbjct: 437 IKNKFA--SNLFVANALVDMYAKSGALKEARKQFELMKIH-DNVSWNAII 483
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 189/407 (46%), Gaps = 48/407 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+ A ++SAC++++ L+ G++ H ++ + +++MY KCG + AR F M
Sbjct: 513 SLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSM 572
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P RNVVS A+IAG + + E +AI L+ ++ G+ P + TF ++ C G + LGR
Sbjct: 573 PSRNVVSVNALIAGYTMGHLE-EAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGR 631
Query: 157 QLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSK 214
Q+H V+K S + +L+ +Y R +D+ +FS + K + W ++I+ +++
Sbjct: 632 QIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQ 691
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------------- 254
+ +AL F + + P++ F SV AC+ + +
Sbjct: 692 QNHHEKAL-QFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEV 750
Query: 255 --------------------LFNEIDSPD-LASWNALIAGVASHSNANEAMSLFSEMRDR 293
+F E+ + + SWN++I G+A + A EA+ +F +M +
Sbjct: 751 TCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQ 810
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCN 352
++PD +T +L AC + +G +V ++ V ++ + + L
Sbjct: 811 SIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLPRVDHLGCMVDILGRWGFLNE 870
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
A +LG AD + W++++ AC +H R +++ ++KP
Sbjct: 871 AEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLM--ELKP 915
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 198/583 (33%), Positives = 307/583 (52%), Gaps = 47/583 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPD--VVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
++ C+ S++ + VH +L S + +VL NH ++Y KC A FD+MPQ
Sbjct: 70 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
RNV SWT MI G +++ D K + +ML SG++P +F + +II++C GL S+ LG+ +
Sbjct: 130 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 189
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
HA ++ +H+ +L+ MY K I D+ VF+ + + SW +MI+ + G
Sbjct: 190 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 249
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSV---------------------------------- 244
LEA F M +GA PN + SV
Sbjct: 250 LEAFDLFVRM-KNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTA 308
Query: 245 ----FSACSNF--ARILF--NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+S C + AR +F N I+ WNA+I+G + + EA+ L+ +M +
Sbjct: 309 LIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGIT 368
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD-SNVPVCNAILTMYAKCSVLCNALL 355
D T S+ A +L G VH ++K G D V V NAI Y+KC L +
Sbjct: 369 SDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRK 428
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF + + D VSW +++ A Q + EE F M P+ TF+ V+ +CA +
Sbjct: 429 VFDRM-EERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLC 487
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
LE Q+H + K GL + + + L+D+Y KCGS+ A K+F+ + NPD+VSW+++I
Sbjct: 488 FLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIIS 547
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
GYAQ G ++AL+LF RM G+ N VTL+ VL ACSH G+VEEGL ++ ME+ YG++
Sbjct: 548 GYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVV 607
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
P EH +C++DLL R G + +A +FI +M + + +VW++LL
Sbjct: 608 PEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLG 650
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 156/556 (28%), Positives = 255/556 (45%), Gaps = 62/556 (11%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
N+ I Y+ +I +C L SL+LG+ VH I++ + + +LNMY K GS+E
Sbjct: 160 NSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIE 219
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
D+ F+ M + N VSW AMI+GC+ N +A L+++M P +T S+ KA
Sbjct: 220 DSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVG 279
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG--IARKDVTSW 205
L V +G+++ + +++ ALI MY+K + DAR+VF I T W
Sbjct: 280 KLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPW 339
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARI------ 254
+MI+ +S+ G EAL + +M +G + + + SVF+A + F R+
Sbjct: 340 NAMISGYSQSGCSQEALELYVQMCQNG-ITSDLYTYCSVFNAIAASKSLQFGRVVHGMVL 398
Query: 255 ------------------------------LFNEIDSPDLASWNALIAGVASHSNANEAM 284
+F+ ++ D+ SW L+ + S EA+
Sbjct: 399 KCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEAL 458
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
+ F MR+ P+ T S+L +C L G QVH + K G D+ + +A++ MY
Sbjct: 459 ATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMY 518
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
AKC + A VF ++ N D VSW +II+ QH E+ +LF RM S IK + +T
Sbjct: 519 AKCGSITEAGKVFDKI-SNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTL 577
Query: 405 NDVMGACAKMASLEMVTQLHCYITKT----GLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
V+ AC+ MV + Y + G+ ++ ++D+ + G L A +
Sbjct: 578 LCVLFACSHGG---MVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIR 634
Query: 461 FME-NPDVVSWSSLILGYAQFGC---GDEALKLFTRMRSLGVSPNL-VTLVGVLTACSHV 515
M P+ + W +L LG GC G+ L + L + P T V +
Sbjct: 635 KMPMEPNEMVWQTL-LG----GCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIET 689
Query: 516 GLVEEGLHLYRIMENE 531
G E+GL L +M+++
Sbjct: 690 GSYEDGLSLRNVMKDQ 705
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 174/351 (49%), Gaps = 28/351 (7%)
Query: 244 VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
V+S CS F A +F+E+ ++ SW +I G H + F EM + +LPD
Sbjct: 110 VYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFA 169
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
+++ +CIG +L G VH+ I+ GF +++ V ++L MYAK + ++ VF +
Sbjct: 170 YSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT 229
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
++ + VSWN++I+ C + E F LF RM P+ T V A K+ + M
Sbjct: 230 EH-NQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGK 288
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF--NFMENPDVVSWSSLILGYAQ 479
++ ++ G+ +V V L+D+Y KCGSL AR +F NF+ W+++I GY+Q
Sbjct: 289 EVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQ 348
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS-----------HVGLVEEGLHLYRIM 528
GC EAL+L+ +M G++ +L T V A + H +++ GL L +
Sbjct: 349 SGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVS 408
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
N + + D ++ G + + ++M + DIV W +L+ +
Sbjct: 409 VN-----------NAIADAYSKCGFLEDVRKVFDRME-ERDIVSWTTLVTA 447
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 191/549 (34%), Positives = 293/549 (53%), Gaps = 39/549 (7%)
Query: 34 RPSTYAG--LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+P T+ LI+A L +L V DHI QP++ N IL++Y K G L +
Sbjct: 37 QPETFLSNNLITAYYKLGNLAYAHHVFDHI----PQPNLFSWNTILSVYSKLGLLSQMQQ 92
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP-GQFTFGSIIKACSGLG 150
F+ MP R+ VSW I+G + +DA+++Y ML+ M + TF +++ CS
Sbjct: 93 IFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFR 152
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
V LGRQ++ ++K GS + + L+ MYTK I DA+ F + ++V +MI
Sbjct: 153 CVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMIT 212
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNAL 270
+ G E+ + LF + D SW +
Sbjct: 213 GLMRCGMIEES-------------------------------QRLFCGLKERDSISWTIM 241
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I G+ + EA+ +F EMR D T S+L AC L L +G Q+H+Y+I+
Sbjct: 242 ITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDH 301
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
NV V +A++ MY+KC + +A VFK + + + +SW +++ Q+ +EE ++F
Sbjct: 302 KDNVFVGSALVDMYSKCRSIKSAETVFKRMPQK-NVISWTAMLVGYGQNGFSEEAVKIFF 360
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
M + ++PD T V+ +CA +ASLE Q HC +GL + V N L+ +Y KCG
Sbjct: 361 EMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCG 420
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
S ++ +LF M D VSW++L+ GYAQFG +E + LF RM + G+ P+ VT +GVL+
Sbjct: 421 STENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLS 480
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACS GLVE+GL + M E+GI+P +HC+C++DLL RAG + EA +FIN M C D+
Sbjct: 481 ACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDV 540
Query: 571 VVWKSLLAS 579
V W +LL+S
Sbjct: 541 VGWATLLSS 549
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 206/440 (46%), Gaps = 73/440 (16%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
++A+ Y + + + T++ ++ CS R + LGR+++ IL DV + +
Sbjct: 119 SDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSP 178
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVV-------------------------------SW 104
+++MY K G + DA+ FD+MP+RNVV SW
Sbjct: 179 LVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISW 238
Query: 105 TAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK 164
T MI G QN E +A+ ++ +M +G QFTFGS++ AC L ++ G+Q+HA+VI+
Sbjct: 239 TIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIR 298
Query: 165 SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCH 224
++H ++ +AL+ MY+K I A VF + +K+V SW +M+ + + G+ EA+
Sbjct: 299 TDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKI 358
Query: 225 FNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------------------ 254
F EM +G +P++F GSV S+C+N A +
Sbjct: 359 FFEMQRNGV-EPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYG 417
Query: 255 ----------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
LF E++ D SW AL+AG A ANE + LF M L PDG+T
Sbjct: 418 KCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIG 477
Query: 305 LLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
+L AC + +G+Q +IK G V C I+ + + L A + +
Sbjct: 478 VLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCH 537
Query: 364 ADSVSWNSIIAACLQHNQAE 383
D V W +++++C H E
Sbjct: 538 PDVVGWATLLSSCRVHGDME 557
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 4/203 (1%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN ++E V F + T +IS+C++L SL+ G + H L+S +
Sbjct: 348 QNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFIT 407
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ N ++ +YGKCGS E++ F +M R+ VSWTA++AG +Q + N+ I L+ +ML G
Sbjct: 408 VSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHG 467
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILD 189
+ P TF ++ ACS G V G Q +IK EHG I + +I + + R+ +
Sbjct: 468 LKPDGVTFIGVLSACSRAGLVEKGLQYFESMIK-EHGIMPIVDHCTCIIDLLGRAGRLEE 526
Query: 190 ARNVFSGIA-RKDVTSWGSMIAA 211
ARN + + DV W +++++
Sbjct: 527 ARNFINNMPCHPDVVGWATLLSS 549
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 202/653 (30%), Positives = 312/653 (47%), Gaps = 77/653 (11%)
Query: 2 SNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
S V LCK EA+ + + + +TY +I C+ R + G+ VH +
Sbjct: 24 SGGEVWRLCKAGRLREAIQLLGIIKQR-GLLVNSNTYGCVIEHCAKARRFEDGKMVHKQL 82
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ D+ L N ++N Y K + A F +M R+VV+W++MIA + N A
Sbjct: 83 DELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAF 142
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+ +M + + P + TF SI+KAC+ + GR++H V + + ALI MY
Sbjct: 143 DTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMY 202
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
+K I A VF + ++V SW ++I A ++ EA + +ML G PN F
Sbjct: 203 SKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAG-ISPNAVTF 261
Query: 242 GSVFSACSN----------------------------------------FARILFNEIDS 261
S+ ++C+ AR +F+ +
Sbjct: 262 VSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSK 321
Query: 262 PDLASWNALIAGVAS-----HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
D+ SW+A+IAG A + +E L MR + P+ +T S+L AC L
Sbjct: 322 RDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALE 381
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG-KNA----------- 364
QG Q+H+ + K+GF+ + + AI MYAKC + A VF ++ KN
Sbjct: 382 QGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYI 441
Query: 365 ------------------DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
+ VSWN +IA Q+ ++F L S M A +PD +T
Sbjct: 442 KCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVIT 501
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
++ AC +A LE +H K GL D V L+ +Y KCG + AR +F+ M N D
Sbjct: 502 ILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRD 561
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
V+W++++ GY Q G G EA+ LF RM VSPN +TL V++ACS GLV+EG ++R
Sbjct: 562 TVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFR 621
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+M+ ++ + P ++H C+VDLL RAG + EAE+FI M C+ DI VW +LL +
Sbjct: 622 MMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGA 674
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 201/444 (45%), Gaps = 84/444 (18%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
A++ + I P+ T+ L+++C++ +L GR++H HI + D+++ N ++
Sbjct: 242 AFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALIT 301
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN-YQENDAIKLYIQMLQ----SGVM 133
MY KC S+++AR FD+M +R+V+SW+AMIAG +Q+ Y++ ++I Q+L+ GV
Sbjct: 302 MYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVF 361
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P + TF SI++AC+ G++ GRQ+HA + K Q A+ MY K I +A V
Sbjct: 362 PNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQV 421
Query: 194 FSGIARKDVTSWGS-------------------------------MIAAFSKLGYELEAL 222
FS +A K+V +W S MIA +++ G ++
Sbjct: 422 FSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVF 481
Query: 223 CHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------------------------ 252
+ M G +QP+ ++ AC A
Sbjct: 482 ELLSSMKAEG-FQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGM 540
Query: 253 ----------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
R +F+++ + D +WNA++AG H + EA+ LF M + P+ +T+
Sbjct: 541 YSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITL 600
Query: 303 HSLLCACIGRLTLYQGMQVHSYI---IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+++ AC + +G ++ + KM C ++ + + L A +
Sbjct: 601 TAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGC--MVDLLGRAGRLQEAEEFIQS 658
Query: 360 LGKNADSVSWNSIIAACLQHNQAE 383
+ D W++++ AC HN +
Sbjct: 659 MPCEPDISVWHALLGACKSHNNVQ 682
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 164/326 (50%), Gaps = 12/326 (3%)
Query: 257 NEIDSPDLAS----WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
E+D P S W AG EA+ L ++ R LL + T ++ C
Sbjct: 15 KELDGPTSVSGGEVWRLCKAG-----RLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKA 69
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
G VH + ++G + ++ + N+++ Y+K + +A VF+ + D V+W+S+
Sbjct: 70 RRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLR-DVVTWSSM 128
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
IAA +N + F F RM + I+P+ ITF ++ AC + LE ++H + G+
Sbjct: 129 IAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGM 188
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
DV V L+ +Y KCG + A ++F+ M +VVSW+++I AQ +EA +L+ +
Sbjct: 189 ETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQ 248
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAG 552
M G+SPN VT V +L +C+ + G ++ + +E G+ + ++ + +
Sbjct: 249 MLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHI-SERGLETDMIVANALITMYCKCN 307
Query: 553 CVHEAEDFINQMACDADIVVWKSLLA 578
V EA + ++M+ D++ W +++A
Sbjct: 308 SVQEAREIFDRMS-KRDVISWSAMIA 332
>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 974
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/619 (31%), Positives = 315/619 (50%), Gaps = 45/619 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S K+ EA +++ T ++ S+ ++SA +SL L G VH
Sbjct: 278 NVMISGHAKRGFAEEA-ISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAT 336
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+V + + ++NMY KC ++ A+ F+ + +RN+V W AM+ G +QN + ++
Sbjct: 337 KEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVME 396
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ M + G P +FTF SI AC+ L + G QLH +IK++ S+L NAL+ MY
Sbjct: 397 FFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYA 456
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + +AR F + D SW ++I + + Y EA F M+ +G P+E
Sbjct: 457 KSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVL-PDEVSLA 515
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
S+ SAC+N AR +F + S
Sbjct: 516 SIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSR 575
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
++ S NALIAG + + EA+ LF E++ L P +T LL C G L G Q+H
Sbjct: 576 NVVSVNALIAGY-TMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIH 634
Query: 323 SYIIKMGF-DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
++K GF S+ VC ++L +Y ++ +F EL V W ++I+ Q N
Sbjct: 635 GQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNH 694
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
E+ + + M + I PD F V+ ACA M+SL+ ++H I TG D +
Sbjct: 695 HEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSS 754
Query: 442 LMDIYIKCGSLGSARKLFNFM-ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+D+Y KCG + + ++F M +V+SW+S+I+G A+ G +EAL++F +M + P
Sbjct: 755 LIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIP 814
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ VT +GVL+ACSH G V EG ++ +M N Y + P +H C+VD+L R G ++EAE+F
Sbjct: 815 DEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEF 874
Query: 561 INQMACDADIVVWKSLLAS 579
IN++ C AD ++W +LL +
Sbjct: 875 INKLGCKADPMLWSTLLGA 893
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 277/522 (53%), Gaps = 8/522 (1%)
Query: 48 LRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAM 107
L++L + +H L +L N I+++Y KCG+++ A+ F ++ +++V +W ++
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 108 IAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
++ + ++ ++ M V P +FTF ++ ACSGL V GRQ+H V K+
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
G Q LI MY K + DAR VF G D SW ++IA + + G+ +EA+ F+
Sbjct: 174 GFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDR 233
Query: 228 MLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANE 282
M G + P++ +V +A R+ LF +I +P++ +WN +I+G A A E
Sbjct: 234 MQRVG-HAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEE 292
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
A+S F E++ L ++ S+L A L G VH+ K G D NV V +A++
Sbjct: 293 AISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVN 352
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
MYAKCS + A VF LG+ + V WN+++ Q+ A+E+ FS M +PD
Sbjct: 353 MYAKCSKMDAAKQVFNSLGER-NIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEF 411
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
TF + ACA + L QLH + K A ++FV N L+D+Y K G+L ARK F M
Sbjct: 412 TFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELM 471
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
+ D VSW+++I+GY Q DEA +F RM S GV P+ V+L +++AC++V ++ G
Sbjct: 472 KIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQ 531
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
+ ++ + G+ + S ++D+ + G V A D M
Sbjct: 532 QCHCLLV-KVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSM 572
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 170/566 (30%), Positives = 298/566 (52%), Gaps = 30/566 (5%)
Query: 30 NIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
N +RP+ T+A ++SACS L+ + GR+VH + + Q +++MY KC L
Sbjct: 135 NHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLR 194
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
DAR+ FD + VSWTA+IAG ++ +A+K++ +M + G P Q T +++ A
Sbjct: 195 DARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYV 254
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV----T 203
LG + R+L + +++A N +I+ + K +A + F + + + +
Sbjct: 255 ALGRLADARKLFTQI----PNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRS 310
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP---NEFIFGS----VFSACSNF--ARI 254
S GS+++A + L ++ ++ M+H A + + GS +++ CS A+
Sbjct: 311 SLGSVLSAIASL-----SMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQ 365
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+FN + ++ WNA++ G A + A E M FS M+ PD T S+ AC
Sbjct: 366 VFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHY 425
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
L G Q+H+ +IK F SN+ V NA++ MYAK L A F EL K D+VSWN+II
Sbjct: 426 LNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQF-ELMKIHDNVSWNAIIV 484
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
+Q +E F +F RM+++ + PD ++ ++ ACA + L+ Q HC + K GL
Sbjct: 485 GYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDT 544
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
+ L+D+Y+KCG + +AR +F M + +VVS ++LI GY G +EA+ LF ++
Sbjct: 545 STCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYT-MGHLEEAIHLFQEIQ 603
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREH-CSCVVDLLARAG 552
+G+ P VT G+L C ++ G ++ ++M ++G + + E C ++ L +
Sbjct: 604 MVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVM--KWGFLSSSEMVCVSLLCLYMNSQ 661
Query: 553 CVHEAEDFINQMACDADIVVWKSLLA 578
++E +++ +VVW +L++
Sbjct: 662 RFVDSETLFSELQYPKGLVVWTALIS 687
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 189/407 (46%), Gaps = 48/407 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+ A ++SAC++++ L+ G++ H ++ + +++MY KCG + AR F M
Sbjct: 513 SLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSM 572
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P RNVVS A+IAG + + E +AI L+ ++ G+ P + TF ++ C G + LGR
Sbjct: 573 PSRNVVSVNALIAGYTMGHLE-EAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGR 631
Query: 157 QLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSK 214
Q+H V+K S + +L+ +Y R +D+ +FS + K + W ++I+ +++
Sbjct: 632 QIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQ 691
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------------- 254
+ +AL F + + P++ F SV AC+ + +
Sbjct: 692 QNHHEKAL-QFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEV 750
Query: 255 --------------------LFNEIDSPD-LASWNALIAGVASHSNANEAMSLFSEMRDR 293
+F E+ + + SWN++I G+A + A EA+ +F +M +
Sbjct: 751 TCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQ 810
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCN 352
++PD +T +L AC + +G +V ++ V ++ + + L
Sbjct: 811 SIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNE 870
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
A +LG AD + W++++ AC +H R +++ ++KP
Sbjct: 871 AEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLM--ELKP 915
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 191/582 (32%), Positives = 307/582 (52%), Gaps = 40/582 (6%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T A + CS L LG ++H + DVV + +++MY KC SLED+ F +
Sbjct: 158 TTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSE 217
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+P +N +SW+A IAGC QN Q +KL+ +M + G+ Q T+ S+ ++C+GL + LG
Sbjct: 218 LPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLG 277
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
QLH H +K++ GS +I A + MY K D + DA +FS + ++ S+ +MI +++
Sbjct: 278 TQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARN 337
Query: 216 GYELEAL----------CHFNEMLHHGAYQPNEFIFG----------------------- 242
+A F+E+ GA I G
Sbjct: 338 EQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVA 397
Query: 243 ----SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
++ C A LF+E++ D SWNA+I + + + +S F M ++
Sbjct: 398 NAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKME 457
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD T S+L AC G+ GM+VH IIK G + V +A++ MY+KC ++ A +
Sbjct: 458 PDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKI 517
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
L + VSWN+II+ ++E+ R FS ML ++PD+ T+ V+ CA +A+
Sbjct: 518 HYRLEEQT-MVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLAT 576
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
+ + Q+H + K L DV++ + L+D+Y KCG++ + +F D V+W+++I G
Sbjct: 577 VGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICG 636
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
+A G G+EAL+LF M + PN T V VL ACSHVG ++GL ++ M + Y + P
Sbjct: 637 FAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEP 696
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
EH SC+VD+L R+G V EA I M +AD ++W++LL+
Sbjct: 697 QLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLS 738
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 169/613 (27%), Positives = 288/613 (46%), Gaps = 76/613 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T++ + CS+ R+L+ G++ H H++LS P V + N ++ MY KC +LE A F++M
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 97 PQRNVVSWTAMIAGCS--------------------------------QNYQENDAIKLY 124
PQR++VSW M+ GC+ QN +I ++
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
++M GVM T +K CS L LG Q+H ++ ++ +AL+ MY K
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ + D+ +VFS + K+ SW + IA + L L F EM G ++ + SV
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKG-IGVSQSTYASV 264
Query: 245 FSACSNF----------------------------------------ARILFNEIDSPDL 264
F +C+ A LF+ + +L
Sbjct: 265 FRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNL 324
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
S+NA+I G A + +A LF +++ D +++ L A +G+Q+H
Sbjct: 325 QSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGL 384
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
IK SN+ V NAIL MY KC L A +F E+ + D VSWN+II AC Q+ +
Sbjct: 385 AIKSNLSSNICVANAILDMYGKCGALVEASGLFDEM-EIRDPVSWNAIITACEQNESEGK 443
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
F ML S+++PD T+ V+ ACA + ++H I K+G+ +FV + L+D
Sbjct: 444 TLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVD 503
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y KCG + A K+ +E +VSW+++I G++ +++ + F+ M +GV P+ T
Sbjct: 504 MYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFT 563
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
VL C+++ V G ++ M + ++ S +VD+ ++ G +H++ + +
Sbjct: 564 YATVLDTCANLATVGLGKQIHAQM-IKLELLSDVYITSTLVDMYSKCGNMHDSL-LMFRK 621
Query: 565 ACDADIVVWKSLL 577
A D V W +++
Sbjct: 622 APKRDSVTWNAMI 634
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 180/384 (46%), Gaps = 48/384 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+ +G +SA + ++ G ++H + S ++ + N IL+MYGKCG+L +A FD+M
Sbjct: 361 SLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEM 420
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+ VSW A+I C QN E + + ML+S + P +FT+GS++KAC+G + G
Sbjct: 421 EIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGM 480
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H +IKS G + +AL+ MY+K + +A + + + + SW ++I+ FS
Sbjct: 481 EVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQK 540
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
++ F+ ML G +P+ F + +V C+N A +
Sbjct: 541 KSEDSQRFFSHMLEMGV-EPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYIT 599
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+F + D +WNA+I G A H EA+ LF M +
Sbjct: 600 STLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIK 659
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM----GFDSNVPVCNAILTMYAKCSVLCN 352
P+ T S+L AC +G+ Y KM + + + ++ + + +
Sbjct: 660 PNHATFVSVLRACSHVGNAKKGL---FYFQKMASIYALEPQLEHYSCMVDILGRSGQVEE 716
Query: 353 ALLVFKELGKNADSVSWNSIIAAC 376
AL + +++ AD++ W ++++ C
Sbjct: 717 ALRLIQDMPFEADAIIWRTLLSIC 740
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/614 (29%), Positives = 318/614 (51%), Gaps = 71/614 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+A + C +LRS G++VH ++ + D + N +++MY KC E FD+M
Sbjct: 278 TFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEM 337
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+RN V+W ++I+ +Q NDA+ L+++M +SG +F GSI+ A +GL + GR
Sbjct: 338 GERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGR 397
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+LH H++++ S +I +AL+ MY+K + +A VF + ++ S+ +++A + + G
Sbjct: 398 ELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEG 457
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-------------------------- 250
EAL +++M QP++F F ++ + C+N
Sbjct: 458 KAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVE 517
Query: 251 --------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+A+ +FN + + SWN++I G + EA+ LF +M+ +
Sbjct: 518 TELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIK 577
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC--------- 347
PD ++ S+L +C+ +G ++H++I++ + + ++ MYAKC
Sbjct: 578 PDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKV 637
Query: 348 -------SVLCNALLV--FKELGKNADSVS------------WNSIIAACLQHNQAEELF 386
V+ N ++V F G+ D+ + WNSI+A +E F
Sbjct: 638 YDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESF 697
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF-DVFVMNGLMDI 445
F ML S I+ D +T ++ C+ + +LE QLH I K G V + L+D+
Sbjct: 698 NHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDM 757
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y KCG++ AR +F+ M ++VSW+++I GY++ GC EAL L+ M G+ PN VT
Sbjct: 758 YSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTF 817
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
+ +L+ACSH GLVEEGL ++ M+ +Y I EH +C+VDLL RAG + +A++F+ +M
Sbjct: 818 LAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMP 877
Query: 566 CDADIVVWKSLLAS 579
+ ++ W +LL +
Sbjct: 878 IEPEVSTWGALLGA 891
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 158/579 (27%), Positives = 283/579 (48%), Gaps = 55/579 (9%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED---A 89
+ P Y+ LI C S Q G+ +H ++ + PD L IL +Y + G L+D A
Sbjct: 69 VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYA 128
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R F++MP+RN+ +W MI ++ + ++LY +M SG +FTF S+IKAC +
Sbjct: 129 RKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAM 188
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
+ RQL + V+K+ +L AL+ Y +F + DA I V +W ++I
Sbjct: 189 EDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVI 248
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------- 250
A + K+ EA F+ ML G P+ F F S C
Sbjct: 249 AGYVKILSWEEAWGIFDRMLKIGVC-PDNFTFASALRVCGALRSRDGGKQVHSKLIACGF 307
Query: 251 -------------FARI--------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
+A+ +F+E+ + +WN++I+ A + N+A+ LF
Sbjct: 308 KGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLR 367
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M++ + + S+L A G + +G ++H ++++ +S++ + +A++ MY+KC +
Sbjct: 368 MQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGM 427
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ-IKPDHITFNDVM 408
+ A VF+ L + + VS+N+++A +Q +AEE L+ M + I+PD TF ++
Sbjct: 428 VEEAHQVFRSLLER-NEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLL 486
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
CA + Q+H ++ + + ++ V L+ +Y +CG L A+++FN M +
Sbjct: 487 TLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAY 546
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY--- 525
SW+S+I GY Q G EAL+LF +M+ G+ P+ +L +L++C + ++G L+
Sbjct: 547 SWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFI 606
Query: 526 -RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
R E GI+ +VD+ A+ G + A +Q
Sbjct: 607 VRNTMEEEGILQV-----VLVDMYAKCGSMDYAWKVYDQ 640
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 152/619 (24%), Positives = 285/619 (46%), Gaps = 85/619 (13%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +I AC ++ + R++ ++ + ++ + +++ Y + G ++DA D++
Sbjct: 177 TFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEI 236
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+VV+W A+IAG + +A ++ +ML+ GV P FTF S ++ C L S G+
Sbjct: 237 EGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGK 296
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H+ +I NALI MY K D VF + ++ +W S+I+A ++ G
Sbjct: 297 QVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFG 356
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
+ +AL F M G Y+ N F GS+ A + A I
Sbjct: 357 HFNDALVLFLRMQESG-YKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILG 415
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE-L 295
+F + + S+NAL+AG A EA+ L+ +M+ + +
Sbjct: 416 SALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGI 475
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD T +LL C + QG Q+H+++I+ N+ V ++ MY++C L A
Sbjct: 476 QPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKE 535
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F + + ++ SWNS+I Q+ + +E RLF +M + IKPD + + ++ +C ++
Sbjct: 536 IFNRMAER-NAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLS 594
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL----------------------- 452
+ +LH +I + + + + L+D+Y KCGS+
Sbjct: 595 DSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVS 654
Query: 453 --------GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
A+ LF+ ME + W+S++ GYA G E+ F M + +++T
Sbjct: 655 AFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLT 714
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV-----VDLLARAGCVHEAED 559
+V ++ CS + +E G L+ ++ + G + +CS V VD+ ++ G + +A
Sbjct: 715 MVTIVNLCSSLPALEHGDQLHSLIIKK-GFV----NCSVVLETALVDMYSKCGAITKART 769
Query: 560 FINQMACDADIVVWKSLLA 578
+ M +IV W ++++
Sbjct: 770 VFDNMN-GKNIVSWNAMIS 787
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 237/476 (49%), Gaps = 37/476 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ ++ EAL Y Q+ I+ T+ L++ C++ R+ GR++H H++
Sbjct: 447 NALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLI 506
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ +++++ +++MY +CG L A+ F++M +RN SW +MI G QN + +A++
Sbjct: 507 RANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALR 566
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ QM +G+ P F+ S++ +C L GR+LH ++++ I Q L+ MY
Sbjct: 567 LFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYA 626
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + A V+ +KDV M++AF
Sbjct: 627 KCGSMDYAWKVYDQTIKKDVILNNVMVSAF------------------------------ 656
Query: 243 SVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
V S +N A+ LF++++ + A WN+++AG A+ E+ + F EM + ++ D LT+
Sbjct: 657 -VNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTM 715
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGF-DSNVPVCNAILTMYAKCSVLCNALLVFKEL- 360
+++ C L G Q+HS IIK GF + +V + A++ MY+KC + A VF +
Sbjct: 716 VTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMN 775
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
GKN VSWN++I+ +H ++E L+ M + P+ +TF ++ AC+ +E
Sbjct: 776 GKNI--VSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEG 833
Query: 421 TQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++ + + + ++D+ + G L A++ M P+V +W +L+
Sbjct: 834 LRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALL 889
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 179/364 (49%), Gaps = 20/364 (5%)
Query: 227 EMLHHGAYQPNEFIFGSVF-----SACSN---FARILFNEIDSPDLASWNALIAGVASHS 278
+M+ +G Y P+ ++ + S C + +AR LF E+ +L +WN +I A
Sbjct: 96 QMISNG-YNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVD 154
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
+ E + L+ MR D T S++ ACI + Q+ S ++K G + N+ V
Sbjct: 155 DYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGG 214
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
A++ YA+ + +A+ E+ + V+WN++IA ++ EE + +F RML +
Sbjct: 215 ALVDGYARFGWMDDAVTSLDEI-EGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVC 273
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
PD+ TF + C + S + Q+H + G D FV N L+D+Y KC S K+
Sbjct: 274 PDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKV 333
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
F+ M + V+W+S+I AQFG ++AL LF RM+ G N L +L A + + +
Sbjct: 334 FDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADI 393
Query: 519 EEGL----HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
+G HL R + N I+ S +VD+ ++ G V EA + + + V +
Sbjct: 394 GKGRELHGHLVRNLLNSDIILG-----SALVDMYSKCGMVEEAHQVFRSL-LERNEVSYN 447
Query: 575 SLLA 578
+LLA
Sbjct: 448 ALLA 451
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 16/155 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S K EAL+ Y+ + T+ ++SACS ++ G ++
Sbjct: 783 NAMISGYSKHGCSKEALILYE-EMPKKGMYPNEVTFLAILSACSHTGLVEEGLRI----- 836
Query: 63 LSKCQPDVVLQNH------ILNMYGKCGSLEDARMGFDKMP-QRNVVSWTAMIAGCSQNY 115
+ Q D ++ ++++ G+ G LEDA+ +KMP + V +W A++ C + +
Sbjct: 837 FTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGAC-RVH 895
Query: 116 QENDAIKLYIQML--QSGVMPGQFTFGSIIKACSG 148
++ D +L Q L PG + S I A +G
Sbjct: 896 KDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAG 930
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 185/547 (33%), Positives = 288/547 (52%), Gaps = 43/547 (7%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGV 132
N L K G L +R FDKM R+ +SWT +IAG +A+ L+ M +Q G+
Sbjct: 94 NSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGL 153
Query: 133 MPGQFTFGSIIKACSGLG-SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
QF +KAC GLG ++C G LH +KS + + +ALI MY K +I
Sbjct: 154 QRDQFMISVALKAC-GLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGC 212
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM----------------------- 228
VF + +++V SW ++IA GY +EAL +F+EM
Sbjct: 213 RVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSS 272
Query: 229 -LHHG----------AYQPNEFI---FGSVFSAC--SNFARILFNEIDSPDLASWNALIA 272
LHHG + + F+ ++++ C +++ LF ++ PD+ SW LI
Sbjct: 273 LLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLIT 332
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
A+ F MR + P+ T +++ AC G Q+H +++++G
Sbjct: 333 TYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVD 392
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
+ V N+I+T+Y+K +L +A LVF + + D +SW++IIA Q A+E F S M
Sbjct: 393 ALSVANSIVTLYSKSGLLKSASLVFHGITRK-DIISWSTIIAVYSQGGYAKEAFDYLSWM 451
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
KP+ + V+ C MA LE Q+H ++ G+ + V + L+ +Y KCGS+
Sbjct: 452 RREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSV 511
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
A K+FN M+ +++SW+++I GYA+ G EA+ LF ++ S+G+ P+ VT +GVLTAC
Sbjct: 512 EEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTAC 571
Query: 513 SHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
SH G+V+ G + + +M NEY I P++EH C++DLL RAG + EAE I M C D VV
Sbjct: 572 SHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVV 631
Query: 573 WKSLLAS 579
W +LL S
Sbjct: 632 WSTLLRS 638
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 200/450 (44%), Gaps = 47/450 (10%)
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
+++ N+ + K ++ +R +F + +D SW ++IA + EAL F+ M
Sbjct: 89 NMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMW 148
Query: 230 HHGAYQPNEFIFGSVFSACSNFARILFNEI------------------------------ 259
Q ++F+ AC I F E+
Sbjct: 149 VQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKI 208
Query: 260 ----------DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
++ SW A+IAG+ EA+ FSEM ++ D T L A
Sbjct: 209 EQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKAS 268
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSW 369
L+ G +H+ IK GFD + V N + TMY KC + +F+++ K D VSW
Sbjct: 269 ADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKM-KMPDVVSW 327
Query: 370 NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
++I +Q + E F RM S + P+ TF V+ ACA +A + Q+H ++ +
Sbjct: 328 TTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLR 387
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
GL + V N ++ +Y K G L SA +F+ + D++SWS++I Y+Q G EA
Sbjct: 388 LGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDY 447
Query: 490 FTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDL 547
+ MR G PN L VL+ C + L+E+G +H + + GI S ++ +
Sbjct: 448 LSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLC---IGIDHEAMVHSALISM 504
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLL 577
++ G V EA N M + +I+ W +++
Sbjct: 505 YSKCGSVEEASKIFNGMKIN-NIISWTAMI 533
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 138/551 (25%), Positives = 235/551 (42%), Gaps = 70/551 (12%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+ AC ++ G +H + S V + + +++MY K G +E F KM +RNV
Sbjct: 164 LKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNV 223
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
VSWTA+IAG +A+ + +M S V TF +KA + + G+ +H
Sbjct: 224 VSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQ 283
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
IK N L MY K + +F + DV SW ++I + + G E A
Sbjct: 284 TIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHA 343
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------------ 251
+ F M PN++ F +V SAC+N
Sbjct: 344 VEAFKRM-RKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVT 402
Query: 252 ----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
A ++F+ I D+ SW+ +IA + A EA S MR P+
Sbjct: 403 LYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFA 462
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
+ S+L C L QG QVH++++ +G D V +A+++MY+KC + A +F +
Sbjct: 463 LSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMK 522
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
N + +SW ++I +H ++E LF ++ + +KPD++TF V+ AC+
Sbjct: 523 IN-NIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACS--------- 572
Query: 422 QLHCYITKTGLAFDVFVMNG------------LMDIYIKCGSLGSARKLFNFME-NPDVV 468
H + G + + + N ++D+ + G L A + M D V
Sbjct: 573 --HAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDV 630
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV-TLVGVLTACSHVGLVEEGLHLYRI 527
WS+L+ G D +T + L + PN T + + + G +E H+ ++
Sbjct: 631 VWSTLLRSCRVHGDVDRG--RWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKL 688
Query: 528 MENEYGIIPTR 538
M+++ G+I R
Sbjct: 689 MKSK-GVIKER 698
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 180/411 (43%), Gaps = 71/411 (17%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+A + A + L G+ +H + + N + MY KCG + F+KM
Sbjct: 260 TFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKM 319
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+VVSWT +I Q +E A++ + +M +S V P ++TF ++I AC+ L G
Sbjct: 320 KMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGE 379
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H HV++ L N+++ +Y+K + A VF GI RKD+ SW ++IA +S+ G
Sbjct: 380 QIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGG 439
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
Y EA + + M G +PNEF SV S C + A +
Sbjct: 440 YAKEAFDYLSWMRREGP-KPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVH 498
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+FN + ++ SW A+I G A H + EA++LF ++ L
Sbjct: 499 SALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLK 558
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA------------ILTMY 344
PD +T +L AC H+ ++ +GF + + N I+ +
Sbjct: 559 PDYVTFIGVLTAC-----------SHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLL 607
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRL 388
+ L A + + + D V W++++ +C H AE+L RL
Sbjct: 608 CRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRL 658
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 120/223 (53%), Gaps = 1/223 (0%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
+N+ T+A +ISAC++L + G ++H H+L + + N I+ +Y K G L+
Sbjct: 352 KSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLK 411
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
A + F + +++++SW+ +IA SQ +A M + G P +F S++ C
Sbjct: 412 SASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCG 471
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
+ + G+Q+HAHV+ + +ALI+MY+K + +A +F+G+ ++ SW +
Sbjct: 472 SMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTA 531
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
MI +++ GY EA+ F ++ G +P+ F V +ACS+
Sbjct: 532 MINGYAEHGYSQEAINLFEKISSVG-LKPDYVTFIGVLTACSH 573
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Query: 34 RPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+P+ +A ++S C S+ L+ G++VH H+L + ++ + +++MY KCGS+E+A
Sbjct: 457 KPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASK 516
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
F+ M N++SWTAMI G +++ +AI L+ ++ G+ P TF ++ ACS G
Sbjct: 517 IFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGM 576
Query: 152 VCLG 155
V LG
Sbjct: 577 VDLG 580
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 190/607 (31%), Positives = 310/607 (51%), Gaps = 61/607 (10%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I T+A ++ CS L LG ++H ++ C DVV + +L+MY K ++
Sbjct: 134 IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESL 193
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F +P++N VSW+A+IAGC QN + A+K + +M + Q + S++++C+ L
Sbjct: 194 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 253
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ LG QLHAH +KS+ + I + A + MY K D + DA+ +F + S+ +MI
Sbjct: 254 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 313
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------- 254
+S+ + +AL F+ ++ G +E VF AC+ +
Sbjct: 314 GYSQEEHGFKALLLFHRLMSSG-LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLS 372
Query: 255 ------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+F+E+ D SWNA+IA + E + LF M
Sbjct: 373 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 432
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ PD T S+L AC G +L GM++HS I+K G SN V +++ MY+KC ++
Sbjct: 433 LRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMI 491
Query: 351 CNALLVFKELGKNADS-------------------VSWNSIIAACLQHNQAEELFRLFSR 391
A + + A+ VSWNSII+ + Q+E+ LF+R
Sbjct: 492 EEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTR 551
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M+ I PD T+ V+ CA +AS + Q+H + K L DV++ + L+D+Y KCG
Sbjct: 552 MMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGD 611
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
L +R +F D V+W+++I GYA G G+EA++LF RM + PN VT + +L A
Sbjct: 612 LHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRA 671
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
C+H+GL+++GL + +M+ +YG+ P H S +VD+L ++G V A + I +M +AD V
Sbjct: 672 CAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV 731
Query: 572 VWKSLLA 578
+W++LL
Sbjct: 732 IWRTLLG 738
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 177/627 (28%), Positives = 298/627 (47%), Gaps = 102/627 (16%)
Query: 45 CSSLRSLQLGRKVHDHILLSKCQP-------------------------------DVVLQ 73
C+ +L+LG++ H H+++S +P DVV
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N ++N Y K + A F+ MP R+VVSW +M++G QN + +I++++ M + G+
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
TF I+K CS L LG Q+H V++ + ++A +AL+ MY K R +++ V
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM--LHHGAYQPNEFIFGSVFSAC--- 248
F GI K+ SW ++IA + AL F EM ++ G Q I+ SV +C
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS---IYASVLRSCAAL 252
Query: 249 ---------------SNF----------------------ARILFNEIDSPDLASWNALI 271
S+F A+ILF+ ++ + S+NA+I
Sbjct: 253 SELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMI 312
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
G + + +A+ LF + L D +++ + AC L +G+Q++ IK
Sbjct: 313 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLS 372
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
+V V NA + MY KC L A VF E+ + D+VSWN+IIAA Q+ + E LF
Sbjct: 373 LDVCVANAAIDMYGKCQALAEAFRVFDEM-RRRDAVSWNAIIAAHEQNGKGYETLFLFVS 431
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
ML S+I+PD TF ++ AC SL ++H I K+G+A + V L+D+Y KCG
Sbjct: 432 MLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 490
Query: 452 LGSARKLFN-FMENPDV-------------------VSWSSLILGYAQFGCGDEALKLFT 491
+ A K+ + F + +V VSW+S+I GY ++A LFT
Sbjct: 491 IEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 550
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLAR 550
RM +G++P+ T VL C+++ G ++ ++++ E + CS +VD+ ++
Sbjct: 551 RMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE--LQSDVYICSTLVDMYSK 608
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLL 577
G +H++ + + + D V W +++
Sbjct: 609 CGDLHDSR-LMFEKSLRRDFVTWNAMI 634
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 214/438 (48%), Gaps = 42/438 (9%)
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
C+ G++ LG+Q HAH+I S N L+ +YT + A VF + +DV SW
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLA 265
MI +SK N+M ++ N F FN + D+
Sbjct: 76 NKMINGYSK----------SNDM-----FKANSF----------------FNMMPVRDVV 104
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SWN++++G + + +++ +F +M + DG T +L C GMQ+H +
Sbjct: 105 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV 164
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
+++G D++V +A+L MYAK +L VF+ + + +SVSW++IIA C+Q+N
Sbjct: 165 VRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK-NSVSWSAIIAGCVQNNLLSLA 223
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
+ F M + V+ +CA ++ L + QLH + K+ A D V +D+
Sbjct: 224 LKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM 283
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y KC ++ A+ LF+ EN + S++++I GY+Q G +AL LF R+ S G+ + ++L
Sbjct: 284 YAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 343
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV----VDLLARAGCVHEAEDFI 561
GV AC+ V + EGL +Y + I + CV +D+ + + EA
Sbjct: 344 SGVFRACALVKGLSEGLQIYGL-----AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVF 398
Query: 562 NQMACDADIVVWKSLLAS 579
++M D V W +++A+
Sbjct: 399 DEMR-RRDAVSWNAIIAA 415
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 194/411 (47%), Gaps = 65/411 (15%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+ +G+ AC+ ++ L G +++ + S DV + N ++MYGKC +L +A FD+M
Sbjct: 342 SLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM 401
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R+ VSW A+IA QN + + + L++ ML+S + P +FTFGSI+KAC+G GS+ G
Sbjct: 402 RRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGM 460
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI-ARKDVT------------ 203
++H+ ++KS S+ +LI MY+K I +A + S R +V+
Sbjct: 461 EIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNK 520
Query: 204 -------SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA---- 252
SW S+I+ + +A F M+ G P++F + +V C+N A
Sbjct: 521 RLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG-ITPDKFTYATVLDTCANLASAGL 579
Query: 253 ------------------------------------RILFNEIDSPDLASWNALIAGVAS 276
R++F + D +WNA+I G A
Sbjct: 580 GKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAH 639
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM--GFDSNV 334
H EA+ LF M + P+ +T S+L AC + +G++ + Y++K G D +
Sbjct: 640 HGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQL 698
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
P + ++ + K + AL + +E+ AD V W +++ C H E+
Sbjct: 699 PHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEV 749
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 194/623 (31%), Positives = 330/623 (52%), Gaps = 58/623 (9%)
Query: 6 VSSLCKQNLYNEALVAY-DFSQNNTNIRIRPSTY--AGLISACSSLRSLQLGR----KVH 58
VS+ Y E+LV + DF + N P+ Y + I ACS L GR ++
Sbjct: 117 VSACNHHGFYEESLVVFLDFWRTRKN---SPNEYILSSFIQACSGLDGS--GRWMVFQLQ 171
Query: 59 DHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
++ S+ DV + +++ Y K G+++ AR+ FD +P+++ V+WT MI+GC + +
Sbjct: 172 SFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSY 231
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
+++L+ Q+++ V+P + +++ ACS L + G+Q+HAH+++ H N LI
Sbjct: 232 VSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLI 291
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
Y K R+ A +F G+ K++ SW ++++ + + EA+ F M G +P+
Sbjct: 292 DSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFG-LKPDM 350
Query: 239 FIFGSVFSACSNF----------------------------------------ARILFNE 258
F S+ ++C++ AR +F+
Sbjct: 351 FACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDI 410
Query: 259 IDSPDLASWNALIAG---VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
+ D+ +NA+I G + + ++A+++F +MR R + P LT SLL A +L
Sbjct: 411 FAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSL 470
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
Q+H + K G + ++ +A++ +Y+ C L ++ LVF E+ K D V WNS+ +
Sbjct: 471 GLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEM-KVKDLVIWNSMFSG 529
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
+Q ++ EE LF + S+ +PD TF D++ A +ASL++ + HC + K GL +
Sbjct: 530 YVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECN 589
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
++ N L+D+Y KCGS A K F+ + DVV W+S+I YA G G +AL++ +M
Sbjct: 590 PYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMC 649
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
G+ PN +T VGVL+ACSH GLVE+GL + +M +GI P EH C+V LL RAG ++
Sbjct: 650 EGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLN 708
Query: 556 EAEDFINQMACDADIVVWKSLLA 578
EA + I +M +VW+SLL+
Sbjct: 709 EARELIEKMPTKPAAIVWRSLLS 731
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 161/573 (28%), Positives = 274/573 (47%), Gaps = 58/573 (10%)
Query: 57 VHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQ 116
VH I++S + D L N ++N+Y + G + AR F+KMP+RN+V+W+ M++ C+ +
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 117 ENDAIKLYIQMLQSGV-MPGQFTFGSIIKACSGL-GSVCLGR----QLHAHVIKSEHGSH 170
+++ +++ ++ P ++ S I+ACSGL GS GR QL + ++KS
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGS---GRWMVFQLQSFLVKSRFDRD 182
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
+ LI Y K I AR VF + K +W +MI+ K+G +L F +++
Sbjct: 183 VYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM- 241
Query: 231 HGAYQPNEFIFGSVFSACS----------------------------------------N 250
G P+ +I +V SACS
Sbjct: 242 EGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVR 301
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
A LF+ + + ++ SW L++G +S EAM LF+ M L PD S+L +C
Sbjct: 302 AAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCA 361
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
L G QVH+Y IK ++ V N+++ MYAKC L A VF + D V +N
Sbjct: 362 SLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAAD-DVVLFN 420
Query: 371 SIIAACLQHNQAEEL---FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
++I + EL +F M I+P +TF ++ A A + SL + Q+H +
Sbjct: 421 AMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM 480
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K GL D+F + L+ +Y C L +R +F+ M+ D+V W+S+ GY Q +EAL
Sbjct: 481 FKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEAL 540
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVD 546
LF ++ P+ T V ++TA ++ ++ G + ++++ G+ + ++D
Sbjct: 541 NLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKR--GLECNPYITNALLD 598
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ A+ G +A + A D+V W S+++S
Sbjct: 599 MYAKCGSPEDAHKAFDS-AASRDVVCWNSVISS 630
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 191/419 (45%), Gaps = 50/419 (11%)
Query: 11 KQN-LYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQ 67
KQN L+ EA+ + + ++P +A ++++C+SL +L+ G +VH + + +
Sbjct: 326 KQNSLHKEAM---ELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLG 382
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ---NYQENDAIKLY 124
D + N +++MY KC L +AR FD +VV + AMI G S+ ++ +DA+ ++
Sbjct: 383 NDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIF 442
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
M + P TF S+++A + L S+ L +Q+H + K + A +ALIA+Y+
Sbjct: 443 HDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNC 502
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ D+R VF + KD+ W SM + + + EAL F E L +P+EF F +
Sbjct: 503 YCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLE-LQLSRDRPDEFTFVDM 561
Query: 245 FSACSNFARI----------------------------------------LFNEIDSPDL 264
+A N A + F+ S D+
Sbjct: 562 VTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDV 621
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
WN++I+ A+H +A+ + +M + P+ +T +L AC + G++
Sbjct: 622 VCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFEL 681
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+++ G + ++++ + L A + +++ ++ W S+++ C + E
Sbjct: 682 MLRFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVE 740
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 190/607 (31%), Positives = 310/607 (51%), Gaps = 61/607 (10%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I T+A ++ CS L LG ++H ++ C DVV + +L+MY K ++
Sbjct: 176 IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESL 235
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F +P++N VSW+A+IAGC QN + A+K + +M + Q + S++++C+ L
Sbjct: 236 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 295
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ LG QLHAH +KS+ + I + A + MY K D + DA+ +F + S+ +MI
Sbjct: 296 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 355
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------- 254
+S+ + +AL F+ ++ G +E VF AC+ +
Sbjct: 356 GYSQEEHGFKALLLFHRLMSSG-LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLS 414
Query: 255 ------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+F+E+ D SWNA+IA + E + LF M
Sbjct: 415 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 474
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ PD T S+L AC G +L GM++HS I+K G SN V +++ MY+KC ++
Sbjct: 475 LRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMI 533
Query: 351 CNALLVFKELGKNADS-------------------VSWNSIIAACLQHNQAEELFRLFSR 391
A + + A+ VSWNSII+ + Q+E+ LF+R
Sbjct: 534 EEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTR 593
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M+ I PD T+ V+ CA +AS + Q+H + K L DV++ + L+D+Y KCG
Sbjct: 594 MMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGD 653
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
L +R +F D V+W+++I GYA G G+EA++LF RM + PN VT + +L A
Sbjct: 654 LHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRA 713
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
C+H+GL+++GL + +M+ +YG+ P H S +VD+L ++G V A + I +M +AD V
Sbjct: 714 CAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV 773
Query: 572 VWKSLLA 578
+W++LL
Sbjct: 774 IWRTLLG 780
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 177/639 (27%), Positives = 303/639 (47%), Gaps = 102/639 (15%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQP------------------------ 68
+ + ++ + C+ +L+LG++ H H+++S +P
Sbjct: 46 VSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMV 105
Query: 69 -------DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
DVV N ++N Y K + A F+ MP R+VVSW +M++G QN + +I
Sbjct: 106 FDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSI 165
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
++++ M + G+ TF I+K CS L LG Q+H V++ + ++A +AL+ MY
Sbjct: 166 EVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMY 225
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM--LHHGAYQPNEF 239
K R +++ VF GI K+ SW ++IA + AL F EM ++ G Q
Sbjct: 226 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS--- 282
Query: 240 IFGSVFSAC------------------SNF----------------------ARILFNEI 259
I+ SV +C S+F A+ILF+
Sbjct: 283 IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNS 342
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
++ + S+NA+I G + + +A+ LF + L D +++ + AC L +G+
Sbjct: 343 ENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL 402
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
Q++ IK +V V NA + MY KC L A VF E+ + D+VSWN+IIAA Q+
Sbjct: 403 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM-RRRDAVSWNAIIAAHEQN 461
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+ E LF ML S+I+PD TF ++ AC SL ++H I K+G+A + V
Sbjct: 462 GKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVG 520
Query: 440 NGLMDIYIKCGSLGSARKLFN-FMENPDV-------------------VSWSSLILGYAQ 479
L+D+Y KCG + A K+ + F + +V VSW+S+I GY
Sbjct: 521 CSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVM 580
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTR 538
++A LFTRM +G++P+ T VL C+++ G ++ ++++ E +
Sbjct: 581 KEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE--LQSDV 638
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
CS +VD+ ++ G +H++ + + + D V W +++
Sbjct: 639 YICSTLVDMYSKCGDLHDSR-LMFEKSLRRDFVTWNAMI 676
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 217/445 (48%), Gaps = 42/445 (9%)
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
F + K C+ G++ LG+Q HAH+I S N L+ +YT + A VF +
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE 258
+DV SW MI +SK N+M ++ N F FN
Sbjct: 111 LRDVVSWNKMINGYSKS----------NDM-----FKANSF----------------FNM 139
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ D+ SWN++++G + + +++ +F +M + DG T +L C G
Sbjct: 140 MPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLG 199
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
MQ+H ++++G D++V +A+L MYAK +L VF+ + + +SVSW++IIA C+Q
Sbjct: 200 MQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK-NSVSWSAIIAGCVQ 258
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+N + F M + V+ +CA ++ L + QLH + K+ A D V
Sbjct: 259 NNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIV 318
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
+D+Y KC ++ A+ LF+ EN + S++++I GY+Q G +AL LF R+ S G+
Sbjct: 319 RTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGL 378
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV----VDLLARAGCV 554
+ ++L GV AC+ V + EGL +Y + I + CV +D+ + +
Sbjct: 379 GFDEISLSGVFRACALVKGLSEGLQIYGL-----AIKSSLSLDVCVANAAIDMYGKCQAL 433
Query: 555 HEAEDFINQMACDADIVVWKSLLAS 579
EA ++M D V W +++A+
Sbjct: 434 AEAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 194/411 (47%), Gaps = 65/411 (15%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+ +G+ AC+ ++ L G +++ + S DV + N ++MYGKC +L +A FD+M
Sbjct: 384 SLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM 443
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R+ VSW A+IA QN + + + L++ ML+S + P +FTFGSI+KAC+G GS+ G
Sbjct: 444 RRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGM 502
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI-ARKDVT------------ 203
++H+ ++KS S+ +LI MY+K I +A + S R +V+
Sbjct: 503 EIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNK 562
Query: 204 -------SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA---- 252
SW S+I+ + +A F M+ G P++F + +V C+N A
Sbjct: 563 RLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGI-TPDKFTYATVLDTCANLASAGL 621
Query: 253 ------------------------------------RILFNEIDSPDLASWNALIAGVAS 276
R++F + D +WNA+I G A
Sbjct: 622 GKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAH 681
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK--MGFDSNV 334
H EA+ LF M + P+ +T S+L AC + +G++ + Y++K G D +
Sbjct: 682 HGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQL 740
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
P + ++ + K + AL + +E+ AD V W +++ C H E+
Sbjct: 741 PHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEV 791
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 191/618 (30%), Positives = 323/618 (52%), Gaps = 42/618 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS + LY + + + ++T+ + T+ +I AC + ++LG +H ++
Sbjct: 114 NALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVI 173
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
DV + N ++ MYGKCG++++A FD MP+ N+VSW +MI S+N D+
Sbjct: 174 KMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFD 233
Query: 123 LYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
L ++ML + G++P T +I+ C+G G V +G +H +K ++ NA++ MY
Sbjct: 234 LLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMY 293
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA-YQPNEFI 240
+K + +A+ F K+V SW +MI+AFS G EA EM G + NE
Sbjct: 294 SKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVT 353
Query: 241 FGSVFSACS---------------------------------------NFARILFNEIDS 261
+V AC N A +F+ I
Sbjct: 354 ILNVLPACLDKLQLRSLKELHGYSFRHCFQHVELSNAFILAYAKCGALNSAEKVFHGIGD 413
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
++SWNALI G A + + +A+ L +M PD T+ SLL AC +L G ++
Sbjct: 414 KTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEI 473
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H Y+++ G +++ V ++L+ Y C +A ++F + K+ + VSWN++I+ Q+
Sbjct: 474 HGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRM-KDKNLVSWNAMISGYSQNGL 532
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
E LF + L+ I+ I V GAC+++++L + + H Y+ K D FV
Sbjct: 533 PYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCS 592
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
++D+Y K G + +RK+F+ +++ +V SW+++I+ + G G EA++L+ RM+ +G P+
Sbjct: 593 IIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPD 652
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
T +G+L AC H GLVEEGL ++ M+N I P EH +C++D+LARAG + +A +
Sbjct: 653 RFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLV 712
Query: 562 NQMACDADIVVWKSLLAS 579
N+M +AD +W SLL S
Sbjct: 713 NEMPEEADNRIWSSLLRS 730
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 176/624 (28%), Positives = 313/624 (50%), Gaps = 58/624 (9%)
Query: 6 VSSLCK-QNLYNEALVAYDFSQNNTNIRIRPSTYAGLI-SACSSLRSLQLGRKVHDHILL 63
+++LC+ NL ++ SQN I ++ GL+ AC + + ++ GR++H +
Sbjct: 12 IAALCETDNLTTALILIQSHSQNAAFISLQAKEAIGLLLQACGNQKDIETGRRLHKFVSD 71
Query: 64 SK-CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S + D VL ++ MY CGS D+R+ FD M +N++ W A+++G ++N D +K
Sbjct: 72 STHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVK 131
Query: 123 LYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+++ ++ + P FTF S+IKAC G+ V LG +H VIK + NAL+ MY
Sbjct: 132 VFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMY 191
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K + +A VF + ++ SW SMI AFS+ G+ ++ EML P+
Sbjct: 192 GKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTV 251
Query: 242 GSVFSACS----------------------------------------NFARILFNEIDS 261
++ C+ N A++ F + ++
Sbjct: 252 VTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNN 311
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEM--RDRELLPDGLTVHSLLCACIGRLTLYQGM 319
++ SWN +I+ + + NEA +L EM + E+ + +T+ ++L AC+ +L L
Sbjct: 312 KNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLK 371
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
++H Y + F +V + NA + YAKC L +A VF +G S SWN++I Q+
Sbjct: 372 ELHGYSFRHCF-QHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVS-SWNALIGGHAQN 429
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+ L +M S +PD T + ++ ACA + SL+ ++H Y+ + GL D FV
Sbjct: 430 GDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVG 489
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
L+ YI CG SAR LF+ M++ ++VSW+++I GY+Q G E+L LF + S G+
Sbjct: 490 TSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQ 549
Query: 500 PNLVTLVGVLTACSHVGLVEEGL----HLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
+ + +V V ACS + + G ++ + ++ E + CS ++D+ A++GC+
Sbjct: 550 SHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVG----CS-IIDMYAKSGCIK 604
Query: 556 EAEDFINQMACDADIVVWKSLLAS 579
E+ + + D ++ W +++ +
Sbjct: 605 ESRKVFDGLK-DKNVASWNAIIVA 627
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 182/382 (47%), Gaps = 27/382 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T + L+ AC+ L+SLQ G+++H ++L + + D + +L+ Y CG AR+ FD+M
Sbjct: 453 TISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRM 512
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+N+VSW AMI+G SQN +++ L+ + L G+ + S+ ACS L ++ LG+
Sbjct: 513 KDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGK 572
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+ H +V+K+ ++I MY K I ++R VF G+ K+V SW ++I A G
Sbjct: 573 EAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHG 632
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS-----PDLAS 266
+ EA+ + M G P+ F + + AC + + F E+ + P L
Sbjct: 633 HGKEAIELYERMKKVGQ-MPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEH 691
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
+ LI +A ++A+ L +EM + D SLL +C L G +V ++
Sbjct: 692 YACLIDMLARAGRLDDALRLVNEMPEE---ADNRIWSSLLRSCRTFGALEIGEKVAKKLL 748
Query: 327 KMGFDS--NVPVCNAILTMYAKCSVLCNALLVFKELGKNADS-VSW--------NSIIAA 375
++ D N + + + K + + KE+G D+ SW + ++
Sbjct: 749 ELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGD 808
Query: 376 CLQHNQAEELFRLFSRMLASQI 397
LQ AE R+ R L +I
Sbjct: 809 SLQPKSAE--IRVIWRRLEERI 828
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 191/601 (31%), Positives = 310/601 (51%), Gaps = 61/601 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+A ++ CS L LG ++H ++ C DVV + +L+MY K ++ F +
Sbjct: 140 TFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGI 199
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P++N VSW+A+IAGC QN + A+K + +M + Q + S++++C+ L + LG
Sbjct: 200 PEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGG 259
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
QLHAH +KS+ + I + A + MY K D + DA+ +F + S+ +MI +S+
Sbjct: 260 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEE 319
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
+ +AL F+ ++ G +E VF AC+ +
Sbjct: 320 HGFKALLLFHRLMSSG-LGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVA 378
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+F+E+ D SWNA+IA + E + LF M +
Sbjct: 379 NAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIE 438
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL------ 350
PD T S+L AC G +L GM++HS I+K G SN V +++ MY+KC ++
Sbjct: 439 PDEFTFGSVLKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKI 497
Query: 351 -------CNALLVFKELGKNADS------VSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
N +EL K + VSWNSII+ + Q+E+ LF+RM+ I
Sbjct: 498 HSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGI 557
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
PD T+ V+ CA +AS + Q+H + K L DV++ + L+D+Y KCG L +R
Sbjct: 558 TPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRL 617
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
+F D V+W+++I GYA G G+EA++LF RM + PN VT + +L AC+H+GL
Sbjct: 618 MFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGL 677
Query: 518 VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+++GL + +M+ +YG+ P H S +VD+L ++G V A + I +M +AD V+W++LL
Sbjct: 678 IDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 737
Query: 578 A 578
Sbjct: 738 G 738
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 178/627 (28%), Positives = 299/627 (47%), Gaps = 102/627 (16%)
Query: 45 CSSLRSLQLGRKVHDHILLSKCQP-------------------------------DVVLQ 73
C+ +L+LG++ H H++LS +P DVV
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N ++N Y K ++ A F+ MP R+VVSW +M++G QN + +I++++ M ++G
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
TF I+K CS L LG Q+H V++ + ++A +AL+ MY K R +++ V
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM--LHHGAYQPNEFIFGSVFSAC--- 248
F GI K+ SW ++IA + AL F EM ++ G Q I+ SV +C
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS---IYASVLRSCAAL 252
Query: 249 ---------------SNF----------------------ARILFNEIDSPDLASWNALI 271
S+F A+ILF++ ++ + S+NA+I
Sbjct: 253 SELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMI 312
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
G + + +A+ LF + L D +++ + AC L +G+Q++ IK
Sbjct: 313 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLS 372
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
+V V NA + MY KC L A VF E+ + D+VSWN+IIAA Q+ + E LF
Sbjct: 373 LDVCVANAAIDMYGKCQALAEAFRVFDEM-RRRDAVSWNAIIAAHEQNGKGYETLFLFVS 431
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
ML S+I+PD TF V+ AC SL ++H I K+G+A + V L+D+Y KCG
Sbjct: 432 MLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 490
Query: 452 LGSARKLFN-FMENPDV-------------------VSWSSLILGYAQFGCGDEALKLFT 491
+ A K+ + F + +V VSW+S+I GY ++A LFT
Sbjct: 491 IEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 550
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLAR 550
RM +G++P+ T VL C+++ G ++ ++++ E + S +VD+ ++
Sbjct: 551 RMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE--LQSDVYISSTLVDMYSK 608
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLL 577
G +H++ + + + D V W +++
Sbjct: 609 CGDLHDSR-LMFEKSLRRDFVTWNAMI 634
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 214/440 (48%), Gaps = 46/440 (10%)
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
C+ G++ LG+Q HAH+I S N L+ +YT + A VF + +DV SW
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLA 265
MI ++K N + S F FN + D+
Sbjct: 76 NKMINGYAK---------------------SNNMVKASFF----------FNMMPVRDVV 104
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL--CACIGRLTLYQGMQVHS 323
SWN++++G + +++ +F +M DG T +L C+C+ +L GMQ+H
Sbjct: 105 SWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLEDTSL--GMQIHG 162
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
++++G D++V +A+L MYAK +L VF+ + + +SVSW++IIA C+Q+N
Sbjct: 163 VVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK-NSVSWSAIIAGCVQNNLLS 221
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
+ F M + V+ +CA ++ L + QLH + K+ A D V +
Sbjct: 222 LALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL 281
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
D+Y KC ++ A+ LF+ EN + S++++I GY+Q G +AL LF R+ S G+ + +
Sbjct: 282 DMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEI 341
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV----VDLLARAGCVHEAED 559
+L GV AC+ V + EGL +Y + I + CV +D+ + + EA
Sbjct: 342 SLSGVFRACALVKGLSEGLQIY-----DLAIKSSLSLDVCVANAAIDMYGKCQALAEAFR 396
Query: 560 FINQMACDADIVVWKSLLAS 579
++M D V W +++A+
Sbjct: 397 VFDEMR-RRDAVSWNAIIAA 415
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 195/411 (47%), Gaps = 65/411 (15%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+ +G+ AC+ ++ L G +++D + S DV + N ++MYGKC +L +A FD+M
Sbjct: 342 SLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM 401
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R+ VSW A+IA QN + + + L++ ML+S + P +FTFGS++KAC+G GS+ G
Sbjct: 402 RRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTG-GSLGYGM 460
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI-ARKDVT------------ 203
++H+ ++KS S+ +LI MY+K I +A + S R +V+
Sbjct: 461 EIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNK 520
Query: 204 -------SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA---- 252
SW S+I+ + +A F M+ G P++F + +V C+N A
Sbjct: 521 RLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG-ITPDKFTYATVLDTCANLASAGL 579
Query: 253 ------------------------------------RILFNEIDSPDLASWNALIAGVAS 276
R++F + D +WNA+I G A
Sbjct: 580 GKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAH 639
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM--GFDSNV 334
H EA+ LF M + P+ +T S+L AC + +G++ + Y++K G D +
Sbjct: 640 HGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQL 698
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
P + ++ + K + AL + +E+ AD V W +++ C H E+
Sbjct: 699 PHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEV 749
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 194/581 (33%), Positives = 305/581 (52%), Gaps = 40/581 (6%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T++ +++AC++L L+ GR V ++ DV + I+++Y KC ++ A F +M
Sbjct: 250 TFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRM 309
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P RNVVSWT +I+G Q A + +M + G +T S++ AC+ +
Sbjct: 310 PIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAV 369
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI-ARKDVTSWGSMIAAFSKL 215
QLH+ + K+ +ALI MY+K + + VF + + K++ W MI+AF++
Sbjct: 370 QLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQS 429
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSV------------------------------- 244
G A+ F ML G +P++F SV
Sbjct: 430 GSTGRAVELFQRMLQEG-LRPDKFCSSSVLSIIDSLSLGRLIHCYILKIGLFTDISVGSS 488
Query: 245 ----FSACSNFAR--ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
+S C + +F ++ D SW ++I G + H +A +A+ LF EM E+ PD
Sbjct: 489 LFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPD 548
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+T+ + L AC +L +G +VH Y ++ V V A++ MY+KC + A VF
Sbjct: 549 QMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFD 608
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
L + D S +S+++ Q+ E+ LF + + + D T + V+GA A + SL+
Sbjct: 609 MLPQK-DQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLD 667
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
+ TQLH +TK GL +V V + L+ +Y KCGS+ K+F +E PD++SW+++I+ YA
Sbjct: 668 IGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYA 727
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
Q G G EALK++ MR G P+ VT VGVL+ACSH G+VEEG M EYGI P
Sbjct: 728 QHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGY 787
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
H +C+VDLL R+G + EAE FIN M + D ++W LLA+
Sbjct: 788 YHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAA 828
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 163/584 (27%), Positives = 285/584 (48%), Gaps = 48/584 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY ++SAC++L S G V+ L + + ++ +++++ K S EDA F +
Sbjct: 149 TYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDV 208
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
NVV W A+I+G +N + A+ L+ QM MP FTF SI+ AC+ L + GR
Sbjct: 209 LCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGR 268
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+ VIK G + A+I +Y K + A F + ++V SW ++I+ F +
Sbjct: 269 GVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKD 328
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------------- 249
+ A F EM G + N + SV +AC+
Sbjct: 329 DSISAFHFFKEMRKVGE-KINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVS 387
Query: 250 -------------NFARILFNEIDS-PDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+ + +F E++S +LA W +I+ A + A+ LF M L
Sbjct: 388 SALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGL 447
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD S+L + I L+L G +H YI+K+G +++ V +++ TMY+KC L +
Sbjct: 448 RPDKFCSSSVL-SIIDSLSL--GRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYT 504
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF+++ + D+VSW S+I +H+ AE+ +LF ML +I+PD +T + AC+ +
Sbjct: 505 VFEQM-PDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALH 563
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
SLE ++H Y + + +V V L+++Y KCG++ AR++F+ + D S SSL+
Sbjct: 564 SLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVS 623
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
GYAQ G ++AL LF +R + + T+ V+ A + + ++ G L+ + + G+
Sbjct: 624 GYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACV-TKMGLN 682
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
S +V + ++ G + E Q+ D++ W +++ S
Sbjct: 683 AEVSVGSSLVTMYSKCGSIDECHKVFEQIE-KPDLISWTAMIVS 725
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 147/517 (28%), Positives = 252/517 (48%), Gaps = 45/517 (8%)
Query: 50 SLQLGRKVHDHILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMI 108
+L+ + +H H L + Q + + N ++ Y K S+ A FDK P NV+SW +I
Sbjct: 60 TLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILI 119
Query: 109 AGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG 168
+GC+QN+ D+ + + +M SG P QFT+GS++ AC+ LGS G +++ +K+
Sbjct: 120 SGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFF 179
Query: 169 SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
S+ + +I ++ K DA VF + ++V W ++I+ K AL F +M
Sbjct: 180 SNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQM 239
Query: 229 LHHGAYQPNEFIFGSVFSACSNFARILF------------------------------NE 258
+ PN F F S+ +AC+ + F +
Sbjct: 240 CCR-FFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRD 298
Query: 259 IDSP----------DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCA 308
+D ++ SW +I+G ++ A F EMR + T+ S+L A
Sbjct: 299 MDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTA 358
Query: 309 CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS 368
C + + + +Q+HS+I K GF + V +A++ MY+K V+ + VF+E+ +
Sbjct: 359 CTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAM 418
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
W +I+A Q LF RML ++PD + V+ + + SL + +HCYI
Sbjct: 419 WAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVL---SIIDSLSLGRLIHCYIL 475
Query: 429 KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
K GL D+ V + L +Y KCGSL + +F M + D VSW+S+I G+++ ++A++
Sbjct: 476 KIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQ 535
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
LF M + P+ +TL LTACS + +E+G ++
Sbjct: 536 LFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVH 572
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 139/563 (24%), Positives = 263/563 (46%), Gaps = 59/563 (10%)
Query: 16 NEALVAYDFSQNNTNI--RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQ 73
++++ A+ F + + +I T +++AC+ ++ ++H I + D +
Sbjct: 328 DDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVS 387
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQ-RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
+ ++NMY K G ++ + F +M +N+ W MI+ +Q+ A++L+ +MLQ G+
Sbjct: 388 SALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGL 447
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
P +F S++ S + S+ LGR +H +++K + + ++L MY+K + ++
Sbjct: 448 RPDKFCSSSVL---SIIDSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYT 504
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-- 250
VF + KD SW SMI FS+ + +A+ F EML +P++ + +ACS
Sbjct: 505 VFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLE-EIRPDQMTLTAALTACSALH 563
Query: 251 --------------------------------------FARILFNEIDSPDLASWNALIA 272
AR +F+ + D S ++L++
Sbjct: 564 SLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVS 623
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A + +A+ LF E+R +L D TV S++ A +L G Q+H+ + KMG ++
Sbjct: 624 GYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNA 683
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
V V ++++TMY+KC + VF+++ K D +SW ++I + QH + E +++ M
Sbjct: 684 EVSVGSSLVTMYSKCGSIDECHKVFEQIEK-PDLISWTAMIVSYAQHGKGAEALKVYDLM 742
Query: 393 LASQIKPDHITFNDVMGACAKMASLEM-VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
KPD +TF V+ AC+ +E + L+ + G+ + ++D+ + G
Sbjct: 743 RKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGR 802
Query: 452 LGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP----NLVTLV 506
L A + N M PD + W L+ GD L R + + P VTL
Sbjct: 803 LKEAERFINNMPIEPDALLWGILLAACKVH--GDIELGRLAAKRVIELEPCEAGAYVTLS 860
Query: 507 GVLTACSHVGLVEEGLHLYRIME 529
+ C+ +G E+ + + +ME
Sbjct: 861 NI---CADMGWWEDVMKIRSLME 880
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 210/444 (47%), Gaps = 50/444 (11%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
+RP + S S + SL LGR +H +IL D+ + + + MY KCGSLE++
Sbjct: 447 LRPDKFCS-SSVLSIIDSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTV 505
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F++MP ++ VSW +MI G S++ A++L+ +ML + P Q T + + ACS L S+
Sbjct: 506 FEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSL 565
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+++H + +++ G ++ AL+ MY+K I+ AR VF + +KD S S+++ +
Sbjct: 566 EKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGY 625
Query: 213 SKLGYELEALCHFNEM------------------------------LHHGAYQPN---EF 239
++ GY +AL F+E+ LH + E
Sbjct: 626 AQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEV 685
Query: 240 IFGS----VFSACSNFARI--LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
GS ++S C + +F +I+ PDL SW A+I A H EA+ ++ MR
Sbjct: 686 SVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKE 745
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGM-QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
PD +T +L AC + +G ++S + G + ++ + + L
Sbjct: 746 GTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKE 805
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP----DHITFNDVM 408
A + D++ W ++AAC H EL RL ++ + +++P ++T +++
Sbjct: 806 AERFINNMPIEPDALLWGILLAACKVHGDI-ELGRLAAKRVI-ELEPCEAGAYVTLSNI- 862
Query: 409 GACAKMASLEMVTQLHCYITKTGL 432
CA M E V ++ + TG+
Sbjct: 863 --CADMGWWEDVMKIRSLMEGTGV 884
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 165/326 (50%), Gaps = 4/326 (1%)
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
LF++ P++ SWN LI+G + + ++ F +MR P+ T S+L AC +
Sbjct: 103 LFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGS 162
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE-LGKNADSVSWNSII 373
G V+S +K GF SN V ++ ++AK +AL VF++ L +N V WN+II
Sbjct: 163 PLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENV--VCWNAII 220
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
+ +++ + LF +M P+ TF+ ++ ACA + LE + ++ K G
Sbjct: 221 SGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAG 280
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
DVFV ++D+Y KC + A K F M +VVSW+++I G+ Q A F M
Sbjct: 281 EDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEM 340
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
R +G N T+ VLTAC+ +++E + L+ + + G S ++++ ++ G
Sbjct: 341 RKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWI-FKTGFYLDSNVSSALINMYSKIGV 399
Query: 554 VHEAEDFINQMACDADIVVWKSLLAS 579
V +E +M ++ +W ++++
Sbjct: 400 VDLSERVFREMESTKNLAMWAVMISA 425
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 99/203 (48%), Gaps = 4/203 (1%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN Y E + ++ I T + +I A + L SL +G ++H + +V
Sbjct: 627 QNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVS 686
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ + ++ MY KCGS+++ F+++ + +++SWTAMI +Q+ + +A+K+Y M + G
Sbjct: 687 VGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEG 746
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG--SHLIAQNALIAMYTKFDRILD 189
P TF ++ ACS G V G H + + E+G ++ + + R+ +
Sbjct: 747 TKPDSVTFVGVLSACSHNGMVEEGYS-HLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKE 805
Query: 190 ARNVFSGIA-RKDVTSWGSMIAA 211
A + + D WG ++AA
Sbjct: 806 AERFINNMPIEPDALLWGILLAA 828
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 5/158 (3%)
Query: 423 LHCYITKTG-LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
LH + KT L + F+ N LM Y K S+ A +LF+ +P+V+SW+ LI G Q
Sbjct: 67 LHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNF 126
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI-MENEYGIIPTREH 540
+++ + F +MR G PN T VL+AC+ +G G +Y + ++N G
Sbjct: 127 SFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKN--GFFSNGYV 184
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++DL A+ +A + C+ ++V W ++++
Sbjct: 185 RAGMIDLFAKLCSFEDALRVFQDVLCE-NVVCWNAIIS 221
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 193/617 (31%), Positives = 319/617 (51%), Gaps = 48/617 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N + + K L+ EAL +F ++ P T+ +I AC+ L ++G V++
Sbjct: 75 NSIIRAFSKNGLFPEAL---EFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
IL + D+ + N +++MY + G L AR FD+MP R++VSW ++I+G S + +A
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+++Y ++ S ++P FT S++ A L V G+ LH +KS S ++ N L+AM
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y KF R DAR VF + +D S+ +MI + KL E++ F E L ++P+
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ--FKPDLLT 309
Query: 241 FGSVFSACSNF----------------------------------------ARILFNEID 260
SV AC + AR +FN ++
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D SWN++I+G + EAM LF M E D +T L+ L G
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG 429
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+HS IK G ++ V NA++ MYAKC + ++L +F +G D+V+WN++I+AC++
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACVRFG 488
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
++ ++M S++ PD TF + CA +A+ + ++HC + + G ++ + N
Sbjct: 489 DFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGN 548
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+++Y KCG L ++ ++F M DVV+W+ +I Y +G G++AL+ F M G+ P
Sbjct: 549 ALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 608
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ V + ++ ACSH GLV+EGL + M+ Y I P EH +CVVDLL+R+ + +AE+F
Sbjct: 609 DSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 668
Query: 561 INQMACDADIVVWKSLL 577
I M D +W S+L
Sbjct: 669 IQAMPIKPDASIWASVL 685
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 148/521 (28%), Positives = 256/521 (49%), Gaps = 45/521 (8%)
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P +NV W ++I S+N +A++ Y ++ +S V P ++TF S+IKAC+GL +G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++ ++ S L NAL+ MY++ + AR VF + +D+ SW S+I+ +S G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
Y EAL ++E L + P+ F SV A N
Sbjct: 187 YYEEALEIYHE-LKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR +F+E+D D S+N +I G E++ +F E D +
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFK 304
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD LTV S+L AC L +++Y++K GF V N ++ +YAKC + A V
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + + D+VSWNSII+ +Q E +LF M+ + + DHIT+ ++ ++A
Sbjct: 365 FNSM-ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L+ LH K+G+ D+ V N L+D+Y KCG +G + K+F+ M D V+W+++I
Sbjct: 424 LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISA 483
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
+FG L++ T+MR V P++ T + L C+ + G ++ + +G
Sbjct: 484 CVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYES 542
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ + ++++ ++ GC+ + +M+ D+V W ++
Sbjct: 543 ELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMI 582
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 167/313 (53%), Gaps = 6/313 (1%)
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WN++I + + EA+ + ++R+ ++ PD T S++ AC G G V+ I+
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
MGF+S++ V NA++ MY++ +L A VF E+ D VSWNS+I+ H EE
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYSSHGYYEEAL 192
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
++ + S I PD T + V+ A + ++ LH + K+G+ V V NGL+ +Y
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMY 252
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNLVTL 505
+K AR++F+ M+ D VS++++I GY + +E++++F + +L P+L+T+
Sbjct: 253 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPDLLTV 310
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
VL AC H+ + ++Y M G + + ++D+ A+ G + A D N M
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKA-GFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 566 CDADIVVWKSLLA 578
C D V W S+++
Sbjct: 370 C-KDTVSWNSIIS 381
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 114/206 (55%)
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
++H+ +I +G DS+ ++ Y+ ++L VF+ + + WNSII A ++
Sbjct: 25 RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKN 84
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
E + ++ S++ PD TF V+ ACA + EM ++ I G D+FV
Sbjct: 85 GLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVG 144
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
N L+D+Y + G L AR++F+ M D+VSW+SLI GY+ G +EAL+++ +++ +
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIV 204
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLY 525
P+ T+ VL A ++ +V++G L+
Sbjct: 205 PDSFTVSSVLPAFGNLLVVKQGQGLH 230
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 204/603 (33%), Positives = 319/603 (52%), Gaps = 46/603 (7%)
Query: 21 AYDFSQN--NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
A +F QN I+ ST ++SA +SL +L G VH L +V + + +++
Sbjct: 311 AIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVS 370
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MY KCG +E A+ FD + ++NVV W AM+ G QN N+ ++L+ M G P FT
Sbjct: 371 MYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFT 430
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
+ SI+ AC+ L + LG QLH+ +IK++ S+L NAL+ MY K + DAR F I
Sbjct: 431 YSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIR 490
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---- 254
+D SW +I + + E+EA F M G P+E S+ SAC++ +
Sbjct: 491 NRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGIL-PDEVSLASILSACASVRGLEQGK 549
Query: 255 --------------LFN------------EIDS--------PD--LASWNALIAGVASHS 278
L++ IDS P+ + S NALIAG A
Sbjct: 550 QVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYA-QI 608
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
N +A++LF +M + +T SLL AC + L G Q+HS I+KMG +
Sbjct: 609 NLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLG 668
Query: 339 -AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
++L MY +A ++F E +V W ++I+ Q++ + +L+ M + +
Sbjct: 669 VSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNV 728
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
PD TF + ACA ++S++ T+ H I TG D + L+D+Y KCG + S+ +
Sbjct: 729 LPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQ 788
Query: 458 LFNFM-ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
+F M DV+SW+S+I+G+A+ G ++AL++F M+ V+P+ VT +GVLTACSH G
Sbjct: 789 VFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSG 848
Query: 517 LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
V EG ++ +M N YG+ P +HC+C+VDLL R G + EAE+FIN++ + D VW ++
Sbjct: 849 RVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATM 908
Query: 577 LAS 579
L +
Sbjct: 909 LGA 911
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 160/496 (32%), Positives = 269/496 (54%), Gaps = 8/496 (1%)
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
VL N I+++Y KC ++ A F ++ +++++W ++++ S+ + +K + + S
Sbjct: 95 VLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNS 154
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
GV P +FTF ++ +C+ L V GRQ+H +V+K S + ALI MY K + + DA
Sbjct: 155 GVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDA 214
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
R++F G D SW SMI + K+G EA+ F EM G +P++ F +V +A +
Sbjct: 215 RSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQ-EPDQVAFVTVINAYVD 273
Query: 251 FARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
R+ LF+ + + ++ +WN +I+G A EA+ F MR + T+ S+
Sbjct: 274 LGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSV 333
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
L A L G+ VH+ +K G SNV V +++++MYAKC + A VF L + +
Sbjct: 334 LSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQ-N 392
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
V WN+++ +Q+ A E+ LF M + PD T++ ++ ACA + L++ QLH
Sbjct: 393 VVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHS 452
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
I K A ++FV N L+D+Y K G+L AR+ F + N D VSW+ +I+GY Q E
Sbjct: 453 VIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVE 512
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
A LF RM LG+ P+ V+L +L+AC+ V +E+G ++ + + G S ++
Sbjct: 513 AFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVH-CLSVKTGQETKLYSGSSLI 571
Query: 546 DLLARAGCVHEAEDFI 561
D+ A+ G + A +
Sbjct: 572 DMYAKCGAIDSAHKIL 587
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 159/497 (31%), Positives = 257/497 (51%), Gaps = 22/497 (4%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
N+ + T+A ++S+C+ L ++ GR+VH +++ + + ++ MY KC L
Sbjct: 153 NSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLT 212
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
DAR FD + + VSWT+MI G + +A+K++ +M + G P Q F ++I A
Sbjct: 213 DARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYV 272
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS--- 204
LG + L + + +++A N +I+ + K ++A F + + + S
Sbjct: 273 DLGRLDNASDLFSRM----PNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRS 328
Query: 205 -WGSMIAAFSKL-GYELEALCH---FNEMLHHGAYQPNEFIFGSVFSACSNF--ARILFN 257
GS+++A + L + L H + LH Y + + S+++ C A+ +F+
Sbjct: 329 TLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLV--SMYAKCGKMEAAKKVFD 386
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL--CACIGRLTL 315
++ ++ WNA++ G + ANE M LF M+ PD T S+L CAC+ L L
Sbjct: 387 TLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDL 446
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
G Q+HS IIK F SN+ V NA++ MYAK L +A F EL +N D+VSWN II
Sbjct: 447 --GHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQF-ELIRNRDNVSWNVIIVG 503
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
+Q E F LF RM I PD ++ ++ ACA + LE Q+HC KTG
Sbjct: 504 YVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETK 563
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
++ + L+D+Y KCG++ SA K+ M VVS ++LI GYAQ ++A+ LF M
Sbjct: 564 LYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINL-EQAVNLFRDMLV 622
Query: 496 LGVSPNLVTLVGVLTAC 512
G++ +T +L AC
Sbjct: 623 EGINSTEITFASLLDAC 639
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/517 (28%), Positives = 253/517 (48%), Gaps = 66/517 (12%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN Y ++ F+ + TY+ ++SAC+ L+ L LG ++H I+ +K ++
Sbjct: 405 QNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLF 464
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ N +++MY K G+LEDAR F+ + R+ VSW +I G Q E +A L+ +M G
Sbjct: 465 VGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLG 524
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
++P + + SI+ AC+ + + G+Q+H +K+ + L + ++LI MY K I A
Sbjct: 525 ILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAH 584
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--- 248
+ + + + V S ++IA ++++ E +A+ F +ML G E F S+ AC
Sbjct: 585 KILACMPERSVVSMNALIAGYAQINLE-QAVNLFRDMLVEG-INSTEITFASLLDACHEQ 642
Query: 249 --------------------------------------SNFARILFNEIDSPDLA-SWNA 269
+ A +LF+E +P A W A
Sbjct: 643 QKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTA 702
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
+I+G++ + + A+ L+ EMR +LPD T S L AC ++ G + HS I G
Sbjct: 703 MISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTG 762
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
FDS+ +A++ MYAKC + +++ VFKE+ + D +SWNS+I ++ AE+ R+F
Sbjct: 763 FDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVF 822
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV-MNG------- 441
M S + PD +TF V+ AC+ +++ L FD+ V + G
Sbjct: 823 DEMKQSHVTPDDVTFLGVLTACSHSGR----------VSEGRLIFDMMVNLYGMQPRADH 872
Query: 442 ---LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + GSL A + N + PD W++++
Sbjct: 873 CACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATML 909
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 387 RLFSRML------ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
R+++ +L + Q+K H F+++ ++ ++ + +H K G + N
Sbjct: 42 RIYTHILQNCLQKSKQVKT-HSLFDEIPQRLSQFSTTNKI--IHAQSLKLGFWSKGVLGN 98
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
++D+Y KC + A + F +E+ D+++W+S++ +++ G +K F + + GV P
Sbjct: 99 VIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWP 158
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
N T VL++C+ + +V+ G ++ +++ + I E ++ + A+ + +A
Sbjct: 159 NEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCE--GALIGMYAKCNFLTDARS 216
Query: 560 FINQMACDADIVVWKSLLA 578
+ A + D V W S++
Sbjct: 217 IFDG-AVELDKVSWTSMIG 234
>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 180/582 (30%), Positives = 306/582 (52%), Gaps = 45/582 (7%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
YA + C +SL G+KVHDH+ ++ +PD+ L N +++MY KCGS+EDA F M
Sbjct: 54 YARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSME 113
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
++VVSW AMI+G + + + +A+ L+ QM + G+ P Q +F SI+ AC + G Q
Sbjct: 114 DKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQ 173
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H+H+ K+ + S + ALI MY K + AR VF+ + ++V SW +MI+ + + G
Sbjct: 174 IHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGD 233
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------- 251
EA F +++ G QPN+ F S+ AC+N
Sbjct: 234 SKEAFVLFQKLIRSGT-QPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGN 292
Query: 252 --------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
AR +F+ + SP+ SWNA+IAG EA LF +M+ + P
Sbjct: 293 ALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYG-EGFMEEAFRLFRDMQQKGFQP 351
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D T SLL C R L +G ++HS I++ ++++V V A+++MYAKC L A VF
Sbjct: 352 DRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVF 411
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
++ + ++VSWN+ IA C +H +E F++F +M + PDH+TF ++ +C
Sbjct: 412 NQMPEK-NAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDF 470
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
E +H I + G+ + V N L+ +Y +CG L AR++F + D+ SW+++I Y
Sbjct: 471 ERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAY 530
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
Q G A LF + +S G + T + VL A +++ ++ G ++ ++E + G+
Sbjct: 531 VQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVE-KAGLEKD 589
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++ + ++ G + +A + + D+V W ++LA+
Sbjct: 590 IRILTTLIKMYSKCGSLRDAYSVFKNVQ-EKDVVCWNAMLAA 630
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/596 (31%), Positives = 317/596 (53%), Gaps = 44/596 (7%)
Query: 24 FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
+ ++ +++ ++SAC + L+ G ++H HI + + DV + ++NMY KC
Sbjct: 141 YQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKC 200
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
GSLE AR F++M +RNVVSWTAMI+G Q+ +A L+ ++++SG P + +F SI+
Sbjct: 201 GSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASIL 260
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
AC+ + G +LHA++ ++ ++ NALI+MY + + +AR VF + +
Sbjct: 261 GACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRV 320
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------ 251
SW +MIA + + G+ EA F +M G +QP+ F + S+ + C++
Sbjct: 321 SWNAMIAGYGE-GFMEEAFRLFRDMQQKG-FQPDRFTYASLLAICADRADLNRGKELHSQ 378
Query: 252 ----------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEA 283
AR +FN++ + SWNA IA H + EA
Sbjct: 379 IVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEA 438
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
+F +MR +++PD +T +LL +C +G +H I + G SN V NA+++M
Sbjct: 439 FQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISM 498
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
Y +C L +A VF + + D SWN++IAA +QH F LF + + K D T
Sbjct: 499 YGRCGKLADAREVFYRI-RRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYT 557
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
F +V+ A A + L+ ++H + K GL D+ ++ L+ +Y KCGSL A +F ++
Sbjct: 558 FINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQ 617
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
DVV W++++ Y G +ALKLF +MR GV+P+ T VL AC+ +G +E G
Sbjct: 618 EKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKK 677
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++ TR H +C+V L RA + EAE+FI +++ ++D ++W+SLL +
Sbjct: 678 FHTQLKEAAMETDTR-HYACMVAALGRASLLKEAEEFIEEISSESDALMWESLLVA 732
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 153/523 (29%), Positives = 258/523 (49%), Gaps = 47/523 (8%)
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGR 156
Q + +W A A +N + +I+ +Q+L + GV + ++ C S+ G+
Sbjct: 13 QESGSTWDAS-AKVGRNTWKGKSIRGGVQLLGKRGVQANLNFYARRLQECVQAKSLAEGK 71
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H H+ ++ + N LI+MY+K I DA NVF + KDV SW +MI+ ++ G
Sbjct: 72 KVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDVVSWNAMISGYALHG 131
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-------------------------- 250
EA+ F +M G +PN+ F S+ SAC
Sbjct: 132 RGQEAVDLFYQMQREG-LKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVS 190
Query: 251 --------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR +FNE+ ++ SW A+I+G H ++ EA LF ++
Sbjct: 191 TALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQ 250
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P+ ++ S+L AC L QG+++H+YI + G + V V NA+++MYA+C L NA V
Sbjct: 251 PNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQV 310
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F L ++ + VSWN++IA EE FRLF M +PD T+ ++ CA A
Sbjct: 311 FDNL-RSPNRVSWNAMIAG-YGEGFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRAD 368
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L +LH I +T DV V L+ +Y KCGSL ARK+FN M + VSW++ I
Sbjct: 369 LNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIAC 428
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
+ G EA ++F +MR V P+ VT + +L +C+ E G +++ ++ ++G++
Sbjct: 429 CCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKID-QWGMLS 487
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++ + R G + +A + ++ D+ W +++A+
Sbjct: 488 NNLVANALISMYGRCGKLADAREVFYRIR-RRDLGSWNAMIAA 529
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/617 (29%), Positives = 311/617 (50%), Gaps = 49/617 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + L EAL Y + + P + ++S+C+ GR +H
Sbjct: 115 LSGYAQNGLGEEALGLYR-QMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHG 173
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
++ + N ++ +Y +CGS A F MP R+ V++ +I+G +Q A++++
Sbjct: 174 FCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFE 233
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M SG+ P T S++ AC+ LG + G QLH+++ K+ S I + +L+ +Y K
Sbjct: 234 EMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCG 293
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSK---LGYELEALCHFNEMLHHGAYQPNEFIFG 242
+ A +F+ R +V W M+ AF + L E C + +PN+F +
Sbjct: 294 DVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQ----MQAAGIRPNQFTYP 349
Query: 243 SVFSACS----------------------------------------NFARILFNEIDSP 262
+ C+ AR + +
Sbjct: 350 CILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK 409
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ SW ++IAG H +A++ F EM+ + PD + + S + C G + QG+Q+H
Sbjct: 410 DVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIH 469
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ I G+ +V + NA++ +YA+C + A F+E+ ++ D ++WN +++ Q
Sbjct: 470 ARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEI-EHKDEITWNGLVSGFAQSGLH 528
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
EE ++F RM S +K + TF + A A +A ++ Q+H + KTG +F+ V N L
Sbjct: 529 EEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNAL 588
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+ +Y KCGS A+ F+ M + VSW+++I +Q G G EAL LF +M+ G+ PN
Sbjct: 589 ISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPND 648
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
VT +GVL ACSHVGLVEEGL ++ M +EYGI P +H +CV+D+ RAG + A+ FI
Sbjct: 649 VTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIE 708
Query: 563 QMACDADIVVWKSLLAS 579
+M AD +VW++LL++
Sbjct: 709 EMPIAADAMVWRTLLSA 725
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 151/587 (25%), Positives = 282/587 (48%), Gaps = 47/587 (8%)
Query: 35 PSTYAGLISAC-SSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
P +A + AC + R Q+ ++H + ++ N ++++Y K G + AR F
Sbjct: 41 PLDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVF 100
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
+++ R+ VSW AM++G +QN +A+ LY QM ++GV+P + S++ +C+
Sbjct: 101 EELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFA 160
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
GR +HA K S + NA+I +Y + A VF + +D ++ ++I+ +
Sbjct: 161 QGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHA 220
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------- 251
+ G+ AL F EM G P+ S+ +AC++
Sbjct: 221 QCGHGEHALEIFEEMQFSG-LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDY 279
Query: 252 ------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
A ++FN D ++ WN ++ ++ ++ LF +M+
Sbjct: 280 IMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAA 339
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ P+ T +L C + G Q+HS +K GF+S++ V ++ MY+K L A
Sbjct: 340 GIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKA 399
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
V E+ K D VSW S+IA +QH ++ F M I PD+I + CA
Sbjct: 400 RRVL-EMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAG 458
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ ++ Q+H I +G + DV + N L+++Y +CG + A F +E+ D ++W+ L
Sbjct: 459 INAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGL 518
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEY 532
+ G+AQ G +EALK+F RM GV N+ T V L+A +++ +++G ++ R+++ +
Sbjct: 519 VSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGH 578
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
E + ++ L + G +A+ ++M+ + + V W +++ S
Sbjct: 579 SF--ETEVGNALISLYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITS 622
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 180/397 (45%), Gaps = 50/397 (12%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IRP+ TY ++ C+ R + LG ++H + + + D+ + +++MY K G LE AR
Sbjct: 341 IRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR 400
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ + +++VVSWT+MIAG Q+ DA+ + +M + G+ P S I C+G+
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN 460
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G Q+HA + S + + NAL+ +Y + RI +A + F I KD +W +++
Sbjct: 461 AMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVS 520
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL--------------- 255
F++ G EAL F M G + N F F S SA +N A I
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGV-KHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHS 579
Query: 256 -------------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
F+E+ + SWN +I + H EA+ LF +M
Sbjct: 580 FETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQM 639
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM----GFDSNVPVCNAILTMYAK 346
+ + P+ +T +L AC + +G+ SY M G ++ ++ +
Sbjct: 640 KKEGIKPNDVTFIGVLAACSHVGLVEEGL---SYFKSMSDEYGIRPRPDHYACVIDIFGR 696
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A +E+ AD++ W ++++AC H E
Sbjct: 697 AGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIE 733
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 162/319 (50%), Gaps = 10/319 (3%)
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCA---CIGRLTLYQGM-Q 320
AS +AG +H + + +SLF+ D+ GL CA C G +Q + +
Sbjct: 7 ASLGRTLAGFLAHEDPAKVLSLFA---DKARQHGGLGPLDFACALRACRGNGRRWQVVPE 63
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H+ + G V N ++ +Y+K ++ A VF+EL D+VSW ++++ Q+
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSAR-DNVSWVAMLSGYAQNG 122
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
EE L+ +M + + P + V+ +C K +H K G ++FV N
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
++ +Y++CGS A ++F M + D V++++LI G+AQ G G+ AL++F M+ G+SP
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ VT+ +L AC+ +G +++G L+ + + GI ++DL + G V A
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYL-FKAGISSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 561 INQMACDADIVVWKSLLAS 579
N + ++V+W +L +
Sbjct: 302 FNS-SDRTNVVLWNLMLVA 319
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/617 (29%), Positives = 311/617 (50%), Gaps = 49/617 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + L EAL Y + + P + ++S+C+ GR +H
Sbjct: 115 LSGYAQNGLGEEALGLYR-QMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHG 173
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
++ + N ++ +Y +CGS A F MP R+ V++ +I+G +Q A++++
Sbjct: 174 FCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFE 233
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M SG+ P T S++ AC+ LG + G QLH+++ K+ S I + +L+ +Y K
Sbjct: 234 EMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCG 293
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSK---LGYELEALCHFNEMLHHGAYQPNEFIFG 242
+ A +F+ R +V W M+ AF + L E C + +PN+F +
Sbjct: 294 DVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQ----MQAAGIRPNQFTYP 349
Query: 243 SVFSACS----------------------------------------NFARILFNEIDSP 262
+ C+ AR + +
Sbjct: 350 CILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK 409
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ SW ++IAG H +A++ F EM+ + PD + + S + C G + QG+Q+H
Sbjct: 410 DVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIH 469
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ I G+ +V + NA++ +YA+C + A F+E+ ++ D ++WN +++ Q
Sbjct: 470 ARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEI-EHKDEITWNGLVSGFAQSGLH 528
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
EE ++F RM S +K + TF + A A +A ++ Q+H + KTG +F+ V N L
Sbjct: 529 EEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNAL 588
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+ +Y KCGS A+ F+ M + VSW+++I +Q G G EAL LF +M+ G+ PN
Sbjct: 589 ISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPND 648
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
VT +GVL ACSHVGLVEEGL ++ M +EYGI P +H +CV+D+ RAG + A+ FI
Sbjct: 649 VTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIE 708
Query: 563 QMACDADIVVWKSLLAS 579
+M AD +VW++LL++
Sbjct: 709 EMPIAADAMVWRTLLSA 725
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 151/587 (25%), Positives = 282/587 (48%), Gaps = 47/587 (8%)
Query: 35 PSTYAGLISAC-SSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
P +A + AC + R Q+ ++H + ++ N ++++Y K G + AR F
Sbjct: 41 PLDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVF 100
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
+++ R+ VSW AM++G +QN +A+ LY QM ++GV+P + S++ +C+
Sbjct: 101 EELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFA 160
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
GR +HA K S + NA+I +Y + A VF + +D ++ ++I+ +
Sbjct: 161 QGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHA 220
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------- 251
+ G+ AL F EM G P+ S+ +AC++
Sbjct: 221 QCGHGEHALEIFEEMQFSG-LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDY 279
Query: 252 ------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
A ++FN D ++ WN ++ ++ ++ LF +M+
Sbjct: 280 IMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAA 339
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ P+ T +L C + G Q+HS +K GF+S++ V ++ MY+K L A
Sbjct: 340 GIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKA 399
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
V E+ K D VSW S+IA +QH ++ F M I PD+I + CA
Sbjct: 400 RRVL-EMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAG 458
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ ++ Q+H I +G + DV + N L+++Y +CG + A F +E+ D ++W+ L
Sbjct: 459 INAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGL 518
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEY 532
+ G+AQ G +EALK+F RM GV N+ T V L+A +++ +++G ++ R+++ +
Sbjct: 519 VSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGH 578
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
E + ++ L + G +A+ ++M+ + + V W +++ S
Sbjct: 579 SF--ETEVGNALISLYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITS 622
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 180/397 (45%), Gaps = 50/397 (12%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IRP+ TY ++ C+ R + LG ++H + + + D+ + +++MY K G LE AR
Sbjct: 341 IRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR 400
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ + +++VVSWT+MIAG Q+ DA+ + +M + G+ P S I C+G+
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN 460
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G Q+HA + S + + NAL+ +Y + RI +A + F I KD +W +++
Sbjct: 461 AMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVS 520
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL--------------- 255
F++ G EAL F M G + N F F S SA +N A I
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGV-KHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHS 579
Query: 256 -------------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
F+E+ + SWN +I + H EA+ LF +M
Sbjct: 580 FETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQM 639
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM----GFDSNVPVCNAILTMYAK 346
+ + P+ +T +L AC + +G+ SY M G ++ ++ +
Sbjct: 640 KKEGIKPNDVTFIGVLAACSHVGLVEEGL---SYFKSMSDEYGIRPRPDHYACVIDIFGR 696
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A +E+ AD++ W ++++AC H E
Sbjct: 697 AGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIE 733
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 162/319 (50%), Gaps = 10/319 (3%)
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCA---CIGRLTLYQGM-Q 320
AS +AG +H + + +SLF+ D+ GL CA C G +Q + +
Sbjct: 7 ASLGRTLAGFLAHEDPAKVLSLFA---DKARQHGGLGPLDFACALRACRGNGRRWQVVPE 63
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H+ + G V N ++ +Y+K ++ A VF+EL D+VSW ++++ Q+
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSAR-DNVSWVAMLSGYAQNG 122
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
EE L+ +M + + P + V+ +C K +H K G ++FV N
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
++ +Y++CGS A ++F M + D V++++LI G+AQ G G+ AL++F M+ G+SP
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ VT+ +L AC+ +G +++G L+ + + GI ++DL + G V A
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYL-FKAGISSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 561 INQMACDADIVVWKSLLAS 579
N + ++V+W +L +
Sbjct: 302 FNS-SDRTNVVLWNLMLVA 319
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/593 (31%), Positives = 319/593 (53%), Gaps = 42/593 (7%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
+ + + P ++ ++SAC+ + ++G ++H +L + + N ++ +Y + G+
Sbjct: 263 HTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNF 322
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
A F+ M QR+ VS+ ++I+G SQ + A++L+ +M + P T S++ AC
Sbjct: 323 IPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSAC 382
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
S +G++ +G+Q H++ IK+ S +I + AL+ +Y K I A F ++V W
Sbjct: 383 SSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWN 442
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------------- 250
M+ A+ L E+ F +M G +PN+F + S+ CS+
Sbjct: 443 VMLVAYGLLDNLNESFKIFTQMQMEGI-EPNQFTYPSILRTCSSLRAVDLGEQIHTQVLK 501
Query: 251 ----------------FARI--------LFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
+A++ +F + D+ SW A+IAG A H EA++L
Sbjct: 502 TGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNL 561
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
F EM+D+ + D + S + AC G L QG Q+H+ G+ ++ V NA++++YA+
Sbjct: 562 FKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYAR 621
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
C + +A F ++ + D++SWNS+I+ Q EE LFS+M + + + TF
Sbjct: 622 CGKVRDAYFAFDKIF-SKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGP 680
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
+ A A +A++++ Q+H I KTG + V N L+ +Y KCG++ A + F M +
Sbjct: 681 AVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKN 740
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
+SW++++ GY+Q G G +AL LF M+ LGV PN VT VGVL+ACSHVGLV+EG+ ++
Sbjct: 741 EISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQ 800
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M +G++P EH +CVVDLL R+G + A F+ +M D +V ++LL++
Sbjct: 801 SMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSA 853
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 175/591 (29%), Positives = 285/591 (48%), Gaps = 49/591 (8%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+R TY L+ C S G K+H IL +VVL ++++Y G L+ A
Sbjct: 64 VRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAV 123
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+MP R + W ++ + L+ +MLQ V P + T+ +++ C G G
Sbjct: 124 TVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGG-G 182
Query: 151 SV---CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
V C+ ++HA I + + L N LI +Y K + A+ VF G+ ++D SW +
Sbjct: 183 DVPFHCV-EKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVA 241
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------ 249
M++ S+ G E EA+ F +M G Y P +IF SV SAC+
Sbjct: 242 MLSGLSQSGCEEEAVLLFCQMHTSGVY-PTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQ 300
Query: 250 --------------------NF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
NF A +FN + D S+N+LI+G++ +++A+ LF
Sbjct: 301 GFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELF 360
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
+M L PD +TV SLL AC L G Q HSY IK G S++ + A+L +Y KC
Sbjct: 361 KKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKC 420
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
S + A F + + V WN ++ A + E F++F++M I+P+ T+ +
Sbjct: 421 SDIKTAHEFFLST-ETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSI 479
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
+ C+ + ++++ Q+H + KTG F+V+V + L+D+Y K G L A K+F ++ DV
Sbjct: 480 LRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDV 539
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
VSW+++I GYAQ EAL LF M+ G+ + + ++AC+ + + +G ++
Sbjct: 540 VSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIH-A 598
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G + +V L AR G V +A F D + W SL++
Sbjct: 599 QACVSGYSDDLSVGNALVSLYARCGKVRDAY-FAFDKIFSKDNISWNSLIS 648
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 166/590 (28%), Positives = 288/590 (48%), Gaps = 47/590 (7%)
Query: 32 RIRPS--TYAGLISACSSLR-SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
+++P TYAG++ C K+H + + + + N ++++Y K G L
Sbjct: 164 KVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNS 223
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A+ FD + +R+ VSW AM++G SQ+ E +A+ L+ QM SGV P + F S++ AC+
Sbjct: 224 AKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTK 283
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+ +G QLH V+K NAL+ +Y++ + A VF+ + ++D S+ S+
Sbjct: 284 VEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSL 343
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL------------- 255
I+ S+ GY +AL F +M +P+ S+ SACS+ +L
Sbjct: 344 ISGLSQQGYSDKALELFKKMCLD-CLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAG 402
Query: 256 ---------------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
F ++ ++ WN ++ N NE+ +F+
Sbjct: 403 MSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFT 462
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+M+ + P+ T S+L C + G Q+H+ ++K GF NV V + ++ MYAK
Sbjct: 463 QMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLG 522
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
L +AL +F+ L K D VSW ++IA QH + E LF M I D+I F +
Sbjct: 523 KLDHALKIFRRL-KEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAI 581
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
ACA + +L Q+H +G + D+ V N L+ +Y +CG + A F+ + + D +
Sbjct: 582 SACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNI 641
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
SW+SLI G+AQ G +EAL LF++M G N T ++A ++V V+ G ++ ++
Sbjct: 642 SWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMI 701
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ G E + ++ L A+ G + +AE +M + + + W ++L
Sbjct: 702 -IKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMP-EKNEISWNAMLT 749
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 144/283 (50%), Gaps = 14/283 (4%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+A ISAC+ +++L G+++H +S D+ + N ++++Y +CG + DA FDK+
Sbjct: 577 FASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIF 636
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
++ +SW ++I+G +Q+ +A+ L+ QM ++G FTFG + A + + +V LG+Q
Sbjct: 637 SKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQ 696
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+HA +IK+ H S N LI +Y K I DA F + K+ SW +M+ +S+ G+
Sbjct: 697 IHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGH 756
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS-----PDLASW 267
+AL F +M G PN F V SACS+ + F + P +
Sbjct: 757 GFKALSLFEDMKQLGVL-PNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHY 815
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
++ + + A EM + PD + +LL ACI
Sbjct: 816 ACVVDLLGRSGLLSRARRFVEEM---PIQPDAMVCRTLLSACI 855
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 142/290 (48%), Gaps = 4/290 (1%)
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M +R + + T LL C+ G ++H I+KMGF + V +C ++ +Y
Sbjct: 59 MEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGD 118
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L A+ VF E+ S WN ++ + A + LF RML ++KPD T+ V+
Sbjct: 119 LDGAVTVFDEMPVRPLSC-WNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLR 177
Query: 410 ACAKM-ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
C V ++H G +FV N L+D+Y K G L SA+K+F+ ++ D V
Sbjct: 178 GCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSV 237
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
SW +++ G +Q GC +EA+ LF +M + GV P VL+AC+ V + G L+ ++
Sbjct: 238 SWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLV 297
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ G C+ +V L +R G AE N M D V + SL++
Sbjct: 298 LKQ-GFSLETYVCNALVTLYSRLGNFIPAEQVFNAM-LQRDEVSYNSLIS 345
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/591 (31%), Positives = 299/591 (50%), Gaps = 54/591 (9%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+ S +L LG+ H I++S D L N++L MY KCGSL AR FD P+R+
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 101 VVSWTAMIAGCSQNYQENDA-----IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+V+W A++ + + ND + L+ + S + T ++K C G +
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+H + IK + AL+ +Y+K R+ DAR +F + +DV W M+ + +L
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--------------------------- 248
G E EA F+E H +P+EF + + C
Sbjct: 263 GLEKEAFQLFSE-FHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDV 321
Query: 249 ---------------SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
+ FAR +FN++ DL SWN++I+ A S E+++LF ++
Sbjct: 322 SVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHE 381
Query: 294 ELLPDGLTVHSLLCACIGR-----LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
L PD T+ S+ A + + L QG Q+H++ IK GFDS++ V + IL MY KC
Sbjct: 382 GLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCG 441
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ NA +VF + D V+W S+I+ C+ + ++ R++ RM S++ PD TF ++
Sbjct: 442 DMVNAGIVFNYISA-PDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLI 500
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
A + + +LE QLH + K D FV L+D+Y KCG++ A +LF M ++
Sbjct: 501 KASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIA 560
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
W+++++G AQ G +EA+ LF M+S G+ P+ V+ +G+L+ACSH GL E M
Sbjct: 561 LWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSM 620
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
N+YGI P EH SC+VD L RAG V EA+ I M A + ++LL +
Sbjct: 621 PNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGA 671
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 236/489 (48%), Gaps = 52/489 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T A ++ C + L VH + + + DV + ++N+Y KCG + DAR+ FD M
Sbjct: 185 TLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWM 244
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC--SGLGSVCL 154
+R+VV W M+ G Q E +A +L+ + +SG+ P +F+ I+ C +G + L
Sbjct: 245 RERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLEL 304
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+Q+H +KS S + N+L+ MY+K AR VF+ + D+ SW SMI++ ++
Sbjct: 305 GKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQ 364
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSV------------------------------ 244
E E++ F ++LH G +P+ F S+
Sbjct: 365 SSLEEESVNLFIDLLHEG-LKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGF 423
Query: 245 -------------FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
+ C + A I+FN I +PD +W ++I+G + N ++A+ ++
Sbjct: 424 DSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHR 483
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
MR ++PD T +L+ A L QG Q+H+ +IK+ S+ V +++ MYAKC
Sbjct: 484 MRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGN 543
Query: 350 LCNALLVFKELGKNADSVS-WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ +A +FK++ N +++ WN+++ QH AEE LF M + I+PD ++F ++
Sbjct: 544 IEDAYRLFKKM--NVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGIL 601
Query: 409 GACAKMA-SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
AC+ + E LH G+ ++ + L+D + G + A K+ M
Sbjct: 602 SACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKAS 661
Query: 468 VSWSSLILG 476
S + +LG
Sbjct: 662 ASINRALLG 670
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
Query: 32 RIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
R+ P T+A LI A S + +L+ GR++H +++ C D + +++MY KCG++EDA
Sbjct: 488 RVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDA 547
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F KM RN+ W AM+ G +Q+ +A+ L+ M G+ P + +F I+ ACS
Sbjct: 548 YRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHA 607
Query: 150 G 150
G
Sbjct: 608 G 608
>gi|302796685|ref|XP_002980104.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
gi|300152331|gb|EFJ18974.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
Length = 623
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/584 (32%), Positives = 300/584 (51%), Gaps = 43/584 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY L+ + +SL GR+VH ++ + D L N ++ MYG+CGSL+DAR F +
Sbjct: 4 TYEALLKQYGNSKSLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGI 63
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
QRNV SWT +I+ QN + ++ ++L M G + TF S++ ACS G + LG+
Sbjct: 64 HQRNVFSWTILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGK 123
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H V + +I NAL+ MYT D + +AR VF + +DV SW +I+A++ G
Sbjct: 124 KIHERVRAKGLETDIITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAG 183
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
Y LEAL + M + +P+ SV AC++
Sbjct: 184 YPLEALQLYRRMEQEFS-RPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVG 242
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR +F+ I D+ WNA+I A + +A +L+ EM + ++
Sbjct: 243 TAVVSFYGKCEAVDDARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMR 302
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P+ +T+ +LL +C + +G +H G+ S+ V NA++ MYAKC L NA V
Sbjct: 303 PNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRV 362
Query: 357 FKE-LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
F E + + ++WN++I A Q + E +++ RM IK +T+ V+ CA
Sbjct: 363 FIEATNRTTNVITWNTMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCANFG 422
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
++H TG DV V N L+ +Y CG+L +A+ F + + +VVSWSS++
Sbjct: 423 DFTTGREVHSRSLATGCCSDV-VQNSLICLYGGCGNLEAAQTAFESVASKNVVSWSSIVA 481
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
YA+ G D A LF M GV PN+VT VL ACSH GL +EG + M+ ++ +
Sbjct: 482 AYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSMQGDHHLE 541
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
PT EH C+V+LLA++G V +A F++ M D W+SLL +
Sbjct: 542 PTPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGA 585
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP T ++ AC+SLR+L G+ +H+ I+ S + DV + +++ YGKC +++DAR
Sbjct: 201 RPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTAVVSFYGKCEAVDDARQ 260
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD++ +++V W AMI +QN+ E A LY++M+++ + P T +++ +CS
Sbjct: 261 VFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLITLLDSCSSTCK 320
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK--DVTSWGSMI 209
+ G LH + SH NALI MY K + +A VF + +V +W +MI
Sbjct: 321 MERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEATNRTTNVITWNTMI 380
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------ 251
A ++ LEAL ++ M G + ++ +G+V + C+NF
Sbjct: 381 VANAQEDLNLEALQIYHRMNQEG-IKASDVTYGTVLAVCANFGDFTTGREVHSRSLATGC 439
Query: 252 ---------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
A+ F + S ++ SW++++A A + + A +LF M
Sbjct: 440 CSDVVQNSLICLYGGCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTM 499
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC----NAILTMYAK 346
+LP+ +T S+L AC +G SY + M D ++ ++ + AK
Sbjct: 500 NQDGVLPNIVTFTSVLHACSHAGLADEGW---SYFLSMQGDHHLEPTPEHYGCMVNLLAK 556
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ A + D+ +W S++ AC H E
Sbjct: 557 SGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKE 593
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 48/294 (16%)
Query: 32 RIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
++RP+ T L+ +CSS ++ G +H + N ++NMY KCGSLE+A
Sbjct: 300 QMRPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENA 359
Query: 90 RMGFDKMPQR--NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
F + R NV++W MI +Q +A+++Y +M Q G+ T+G+++ C+
Sbjct: 360 TRVFIEATNRTTNVITWNTMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCA 419
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
G GR++H+ + + S ++ QN+LI +Y + A+ F +A K+V SW S
Sbjct: 420 NFGDFTTGREVHSRSLATGCCSDVV-QNSLICLYGGCGNLEAAQTAFESVASKNVVSWSS 478
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-------FARILFNEID 260
++AA+++ G E A F M G PN F SV ACS+ ++ L + D
Sbjct: 479 IVAAYARNGEEDRARNLFWTMNQDGVL-PNIVTFTSVLHACSHAGLADEGWSYFLSMQGD 537
Query: 261 -----------------------------------SPDLASWNALIAGVASHSN 279
PD ++W +L+ H++
Sbjct: 538 HHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTD 591
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 112/214 (52%), Gaps = 10/214 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + + +++L EAL Y N I+ TY +++ C++ GR+VH L
Sbjct: 377 NTMIVANAQEDLNLEALQIY-HRMNQEGIKASDVTYGTVLAVCANFGDFTTGREVHSRSL 435
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ C DVV QN ++ +YG CG+LE A+ F+ + +NVVSW++++A ++N +E+ A
Sbjct: 436 ATGCCSDVV-QNSLICLYGGCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARN 494
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ----NALI 178
L+ M Q GV+P TF S++ ACS G L + ++ + + HL ++
Sbjct: 495 LFWTMNQDGVLPNIVTFTSVLHACSHAG---LADEGWSYFLSMQGDHHLEPTPEHYGCMV 551
Query: 179 AMYTKFDRILDARNVFSGI-ARKDVTSWGSMIAA 211
+ K R+ A + S + + D ++W S++ A
Sbjct: 552 NLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGA 585
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 199/653 (30%), Positives = 309/653 (47%), Gaps = 77/653 (11%)
Query: 2 SNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
S V LCK EA+ + + + +TY +I C+ LR + G+ VH +
Sbjct: 46 SGGEVWRLCKAGRLKEAIQLLGIIKQR-GLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQL 104
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
D+ L N ++N Y K G + F +M R+VV+W++MIA + N A
Sbjct: 105 DELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAF 164
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+ +M + + P + TF SI+KAC+ + R++H V S + + ALI MY
Sbjct: 165 DTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMY 224
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
+K I A +F + ++V SW ++I A ++ EA + +ML G PN F
Sbjct: 225 SKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAG-ISPNAVTF 283
Query: 242 GSVFSACSNF----------------------------------------ARILFNEIDS 261
S+ ++C+ AR F+ +
Sbjct: 284 VSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSK 343
Query: 262 PDLASWNALIAGVAS-----HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
D+ SW+A+IAG A + +E L MR + P+ +T S+L AC L
Sbjct: 344 RDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALE 403
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL-GKNA----------- 364
QG Q+H+ I K+GF+S+ + AI MYAKC + A VF ++ KN
Sbjct: 404 QGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYI 463
Query: 365 ------------------DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
+ VSWN +IA Q ++F L S M +PD +T
Sbjct: 464 KCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIIS 523
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
++ AC +++LE +H K GL D V L+ +Y KCG + AR +F+ + N D
Sbjct: 524 ILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRD 583
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
V+W++++ GY Q G G EA+ LF RM V PN +T V++AC GLV+EG ++R
Sbjct: 584 TVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFR 643
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
IM+ ++ + P ++H C+VDLL RAG + EAE+FI +M C+ DI VW +LL +
Sbjct: 644 IMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGA 696
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 199/618 (32%), Positives = 317/618 (51%), Gaps = 47/618 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ LC + A+ D S + I + Y LI C R+ + G +V+ ++
Sbjct: 75 NSHIYQLCLLGNLDRAMSYLD-SMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVS 133
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+S + L N +L+M+ + G+L DA F +M +RN+ SW ++ G ++ ++A+
Sbjct: 134 ISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALD 193
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
LY +ML GV P +TF +++ C G+ ++ GR++H HVI+ S + NALI MY
Sbjct: 194 LYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYV 253
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + AR VF + +D SW +MI+ + + G LE L F M+ + P+
Sbjct: 254 KCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPV-DPDLMTMT 312
Query: 243 SVFSAC------------------SNFAR----------------------ILFNEIDSP 262
SV +AC + F R +F+ +
Sbjct: 313 SVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECR 372
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
DL SW A+I+G + +A+ + M ++PD +T+ +L AC L GM +H
Sbjct: 373 DLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLH 432
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF-KELGKNADSVSWNSIIAACLQHNQ 381
+ G S V N+++ MYAKC + AL +F L KN VSW SII +N+
Sbjct: 433 EVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNI--VSWTSIILGLRINNR 490
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
E F M+ ++KP+ +T V+ ACA++ +L ++H + +TG++FD F+ N
Sbjct: 491 CFEALFFFREMI-RRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNA 549
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
++D+Y++CG + A K F F + +V SW+ L+ GYA+ G G A +LF RM VSPN
Sbjct: 550 ILDMYVRCGRMEYAWKQF-FSVDHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPN 608
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
VT + +L ACS G+V EGL + M+ +Y I+P +H +CVVDLL R+G + EA +FI
Sbjct: 609 EVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFI 668
Query: 562 NQMACDADIVVWKSLLAS 579
+M D VW +LL S
Sbjct: 669 QKMPMKPDPAVWGALLNS 686
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 323/615 (52%), Gaps = 44/615 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNI-RIRPSTYAGLISACSSLRSLQLGRKVHDHILLS 64
V S+ Q YNE + Y T + ++ A +I AC + G +VH +++ S
Sbjct: 112 VVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKS 171
Query: 65 KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
DV + ++ +Y K G ++ AR+ FD + + V+WTA+I G +++ + +++L+
Sbjct: 172 GFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLF 231
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
M++S V+P ++ SI+ ACS LG + G+Q+HA+V++SE + N LI YTK
Sbjct: 232 NLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKC 291
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
R+ + +F + K++ SW +MIA + + Y+ EA+ EM G ++P+E+ SV
Sbjct: 292 GRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMG-WKPDEYACSSV 350
Query: 245 FSAC-----------------------SNF-----------------ARILFNEIDSPDL 264
++C NF A+ +F+ + +
Sbjct: 351 LTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSV 410
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
+NA+I G + A+ +F EMR + + P LT SLL L L Q+H
Sbjct: 411 VYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGL 470
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
IIK GF + +A++ +Y+KCS + +A VF E N D V WNS+ + ++EE
Sbjct: 471 IIKYGFSLDKFTSSALIDVYSKCSCIRDARYVF-EGTTNKDIVVWNSLFSGYNLQLKSEE 529
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
F+L+S + S+ +P+ TF + A + +ASL Q H + K GL D F+ N L+D
Sbjct: 530 AFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVD 589
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y KCGS+ A K+F+ D W+S+I YAQ G +EAL++F M S ++PN VT
Sbjct: 590 MYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVT 649
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
V VL+ACSHVG VE+GL Y M YGI P EH + VV LL RAG + EA +FI +M
Sbjct: 650 FVSVLSACSHVGFVEDGLQHYNSMA-RYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKM 708
Query: 565 ACDADIVVWKSLLAS 579
+VW+SLL++
Sbjct: 709 TIRPAALVWRSLLSA 723
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 169/596 (28%), Positives = 286/596 (47%), Gaps = 47/596 (7%)
Query: 25 SQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCG 84
S ++ N++++ A L+ A S +S+ RKVH ++L Q DV L N +L+ Y K G
Sbjct: 30 SFSSQNVKVKGRALANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIG 89
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP-GQFTFGSII 143
S+ DA FDKMP RN+VSW+++++ +Q A+ +++ ++ V ++ SII
Sbjct: 90 SVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASII 149
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
+AC G Q+H++VIKS G + +L+ +Y K I AR VF G+ K
Sbjct: 150 RACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPV 209
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------- 249
+W ++I ++K G +L FN M+ P++++ S+ +ACS
Sbjct: 210 TWTAIITGYTKSGRSEVSLQLFNLMMESNVI-PDKYVLSSILNACSVLGYLKGGKQIHAY 268
Query: 250 --------------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEA 283
+ LF+ +D ++ SW +IAG +S EA
Sbjct: 269 VLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEA 328
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
+ L EM PD S+L +C L G Q+HSY+IK+ + + V NA++ M
Sbjct: 329 VELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDM 388
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
Y+KC+ L +A VF + ++ V +N++I + +F M + P +T
Sbjct: 389 YSKCNALDDAKRVFDVVTCHS-VVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLT 447
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
F ++G A + L++ Q+H I K G + D F + L+D+Y KC + AR +F
Sbjct: 448 FVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTT 507
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
N D+V W+SL GY +EA KL++ ++ PN T + TA S + + G
Sbjct: 508 NKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQ 567
Query: 524 LY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++M + G+ + +VD+ A+ G V EAE + + D W S+++
Sbjct: 568 FHNQVM--KMGLESDPFITNALVDMYAKCGSVEEAEKIFSS-SVWKDTACWNSMIS 620
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 125/267 (46%), Gaps = 13/267 (4%)
Query: 52 QLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGC 111
QL +++H I+ D + ++++Y KC + DAR F+ +++V W ++ +G
Sbjct: 462 QLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGY 521
Query: 112 SQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL 171
+ + +A KLY + S P +FTF ++ A S L S+ G+Q H V+K S
Sbjct: 522 NLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDP 581
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH 231
NAL+ MY K + +A +FS KD W SMI+ +++ G EAL F M+ +
Sbjct: 582 FITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSN 641
Query: 232 GAYQPNEFIFGSVFSACSNFARIL-----FNEID----SPDLASWNALIAGVASHSNANE 282
PN F SV SACS+ + +N + P + + +++ + E
Sbjct: 642 NI-NPNYVTFVSVLSACSHVGFVEDGLQHYNSMARYGIEPGIEHYASVVTLLGRAGRLTE 700
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCAC 309
A +M R P L SLL AC
Sbjct: 701 AREFIEKMTIR---PAALVWRSLLSAC 724
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 190/617 (30%), Positives = 318/617 (51%), Gaps = 48/617 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N + + K + +AL +F ++ P T+ +I AC+ L ++G V+
Sbjct: 75 NSIIRAFSKNGWFPKAL---EFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQ 131
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
IL + D+ + N +++MY + G L AR FD+MP R++VSW ++I+G S + +A
Sbjct: 132 ILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+++Y ++ S ++P FT S++ A + L V G+ LH +KS S + N L+AM
Sbjct: 192 LEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAM 251
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y KF R DAR VF + +D ++ +MI + KL E++ F E L ++P+
Sbjct: 252 YLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQ--FKPDILT 309
Query: 241 FGSVFSACSNF----------------------------------------ARILFNEID 260
SV AC + AR +FN ++
Sbjct: 310 VTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSME 369
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D SWN++I+G + EAM LF M E D +T L+ L G
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKG 429
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+HS IK G ++ V NA++ MYAKC + ++L +F +G D+V+WN++I+AC++
Sbjct: 430 LHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMG-TLDTVTWNTVISACVRFG 488
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
++ ++M +++ PD TF + CA +A+ + ++HC + + G ++ + N
Sbjct: 489 DFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGN 548
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+++Y KCG L S+ ++F M DVV+W+ +I Y +G G++AL+ F M G+ P
Sbjct: 549 ALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVP 608
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ V + ++ ACSH GLVE+GL + M+ Y I P EH +CVVDLL+R+ + +AE+F
Sbjct: 609 DSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 668
Query: 561 INQMACDADIVVWKSLL 577
I M + D +W S+L
Sbjct: 669 IQAMPIEPDASIWASVL 685
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 147/521 (28%), Positives = 257/521 (49%), Gaps = 45/521 (8%)
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P +NV W ++I S+N A++ Y ++ +S V P ++TF S+IKAC+GL +G
Sbjct: 67 PAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++ +++ S L NAL+ MY++ + AR VF + +D+ SW S+I+ +S G
Sbjct: 127 LVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
Y EAL ++E L + P+ F SV A +N
Sbjct: 187 YYEEALEIYHE-LRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVN 245
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR +F+E+ D ++N +I G E++ +F E D +
Sbjct: 246 NGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLD-QFK 304
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD LTV S+LCAC L +++Y+++ GF V N ++ +YAKC + A V
Sbjct: 305 PDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDV 364
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + + D+VSWNSII+ +Q E +LF M+ + + DHIT+ ++ ++A
Sbjct: 365 FNSM-ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLAD 423
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L+ LH K+G+ D+ V N L+D+Y KCG +G + K+FN M D V+W+++I
Sbjct: 424 LKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISA 483
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
+FG L++ T+MR V P++ T + L C+ + G ++ + +G
Sbjct: 484 CVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL-RFGYES 542
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ + ++++ ++ GC+ + +M+ D+V W ++
Sbjct: 543 ELQIGNALIEMYSKCGCLESSFRVFERMS-RRDVVTWTGMI 582
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 167/313 (53%), Gaps = 6/313 (1%)
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WN++I + + +A+ + ++R+ ++ PD T S++ AC G G V+ I+
Sbjct: 74 WNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQIL 133
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+MGF+S++ V NA++ MY++ +L A VF E+ D VSWNS+I+ H EE
Sbjct: 134 EMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVR-DLVSWNSLISGYSSHGYYEEAL 192
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
++ + S I PD T + V+ A A + ++ LH + K+G+ V NGL+ +Y
Sbjct: 193 EIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMY 252
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNLVTL 505
+K AR++F+ M D V+++++I GY + +E++K+F + +L P+++T+
Sbjct: 253 LKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMF--LENLDQFKPDILTV 310
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
VL AC H+ + ++Y M G + + ++D+ A+ G + A D N M
Sbjct: 311 TSVLCACGHLRDLSLAKYIYNYMLRA-GFVLESTVKNILIDVYAKCGDMITARDVFNSME 369
Query: 566 CDADIVVWKSLLA 578
C D V W S+++
Sbjct: 370 C-KDTVSWNSIIS 381
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 115/206 (55%)
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
++H+ +I +G D + ++ Y+ ++L VF+ + + WNSII A ++
Sbjct: 25 RIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFSKN 84
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+ + ++ S++ PD TF V+ ACA + EM ++ I + G D++V
Sbjct: 85 GWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYVG 144
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
N L+D+Y + G L AR++F+ M D+VSW+SLI GY+ G +EAL+++ +R+ +
Sbjct: 145 NALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIV 204
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLY 525
P+ T+ VL A +++ +V++G L+
Sbjct: 205 PDSFTVSSVLPAFANLLVVKQGQGLH 230
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 3/170 (1%)
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN-PDVV 468
A + ++L + ++H + GL F L+D Y + S+ +F + +V
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVY 72
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
W+S+I +++ G +AL+ + ++R VSP+ T V+ AC+ + E G +Y+ +
Sbjct: 73 IWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQI 132
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
E G + +VD+ +R G + A ++M D+V W SL++
Sbjct: 133 L-EMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPV-RDLVSWNSLIS 180
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 310/586 (52%), Gaps = 45/586 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+ Y L+ AC +SL +K+H H L + D + + + +Y C + AR FD+
Sbjct: 9 NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+P +V+ W +I + N + AI LY ML GV P ++T+ ++KACSGL ++ G
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
++H+H S + AL+ Y K +++A+ +FS ++ +DV +W +MIA S
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 216 GY-------------------------------ELEALCHFNEMLHHGAYQPNEFIFGSV 244
G E +AL H + HG F G V
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKAL--HGYCVRRSFDNGVV 246
Query: 245 FSA----------CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
C +AR +F+ + + SW+A+I G + EA+ LF +M ++
Sbjct: 247 VGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKD 306
Query: 295 LL-PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ P +T+ S+L AC L +G ++H YIIK+G ++ + N +L+MYAKC V+ +A
Sbjct: 307 AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDA 366
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
+ F E+ DSVS+++I++ C+Q+ A +F M S I PD T V+ AC+
Sbjct: 367 IRFFDEMNPK-DSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSH 425
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+A+L+ H Y+ G A D + N L+D+Y KCG + AR++FN M+ D+VSW+++
Sbjct: 426 LAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAM 485
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I+GY G G EAL LF + +LG+ P+ +T + +L++CSH GLV EG + M ++
Sbjct: 486 IIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFS 545
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
I+P EHC C+VD+L RAG + EA FI M + D+ +W +LL++
Sbjct: 546 IVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 591
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 151/566 (26%), Positives = 262/566 (46%), Gaps = 63/566 (11%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
A D + ++ +RP+ TY ++ ACS L +++ G ++H H + + DV + +++
Sbjct: 93 AIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVD 152
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
Y KCG L +A+ F M R+VV+W AMIAGCS +DA++L +QM + G+ P T
Sbjct: 153 FYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSST 212
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
++ ++ G+ LH + ++ + ++ L+ MY K +L AR +F +
Sbjct: 213 IVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMG 272
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---- 254
++ SW +MI + EAL F++M+ A P GSV AC+ +
Sbjct: 273 VRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGR 332
Query: 255 ------------------------------------LFNEIDSPDLASWNALIAGVASHS 278
F+E++ D S++A+++G +
Sbjct: 333 KLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNG 392
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
NA A+S+F M+ + PD T+ +L AC L G H Y+I GF ++ +CN
Sbjct: 393 NAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICN 452
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
A++ MY+KC + A VF + ++ D VSWN++I H E LF +LA +K
Sbjct: 453 ALIDMYSKCGKISFAREVFNRMDRH-DIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLK 511
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG----LMDIYIKCGSLGS 454
PD ITF ++ +C+ +V + + F + ++DI + G +
Sbjct: 512 PDDITFICLLSSCSHSG---LVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDE 568
Query: 455 ARKLFNFME-NPDVVSWSSLILG---YAQFGCGDEALKLFTRMRSLGV--SPNLVTLVGV 508
A M PDV WS+L+ + G+E K +++SLG + N V L +
Sbjct: 569 AHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSK---KIQSLGPESTGNFVLLSNI 625
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGI 534
+A G ++ H+ RI + ++G+
Sbjct: 626 YSA---AGRWDDAAHI-RITQKDWGL 647
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 193/405 (47%), Gaps = 24/405 (5%)
Query: 5 YVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLS 64
YV+S C + EAL +D + P T ++ AC+ L L GRK+H +I+
Sbjct: 286 YVASDCMK----EALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKL 341
Query: 65 KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
D++L N +L+MY KCG ++DA FD+M ++ VS++A+++GC QN A+ ++
Sbjct: 342 GSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIF 401
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
M SG+ P T ++ ACS L ++ G H ++I + + NALI MY+K
Sbjct: 402 RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKC 461
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+I AR VF+ + R D+ SW +MI + G +EAL F+++L G +P++ F +
Sbjct: 462 GKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG-LKPDDITFICL 520
Query: 245 FSACSNF-----ARILFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
S+CS+ R+ F+ + P + ++ + +EA +R+
Sbjct: 521 LSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHF---IRNMP 577
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS--NVPVCNAILTMYAKCSVLCN 352
PD +LL AC + G +V I +G +S N + + I + + +
Sbjct: 578 FEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAH 637
Query: 353 ALLVFKELG-KNADSVSW---NSIIAACLQHNQAEELFRLFSRML 393
+ K+ G K SW N I+ A + +Q+ +R L
Sbjct: 638 IRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKL 682
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 197/619 (31%), Positives = 316/619 (51%), Gaps = 45/619 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S K Y EAL A+ + ++ ST A ++SA +SL +L G VH H +
Sbjct: 186 NVMISGHAKTAHYEEAL-AFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAI 244
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + + + ++NMYGKC +DAR FD + Q+N++ W AM+ SQN ++ ++
Sbjct: 245 KQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVME 304
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L++ M+ G+ P +FT+ SI+ C+ + +GRQLH+ +IK S+L NALI MY
Sbjct: 305 LFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYA 364
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + +A F + +D SW ++I + + E A F M+ G P+E
Sbjct: 365 KAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIV-PDEVSLA 423
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
S+ SAC N A ++ +
Sbjct: 424 SILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPER 483
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+ S NALIAG A N E+++L EM+ L P +T SL+ C G + G+Q+H
Sbjct: 484 SVVSVNALIAGYAL-KNTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIH 542
Query: 323 SYIIKMGFDSNVP-VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
I+K G + ++L MY L +A ++F E V W ++I+ +Q+
Sbjct: 543 CAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNEC 602
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
++ L+ M + I PD TF V+ ACA ++SL ++H I TG D +
Sbjct: 603 SDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSA 662
Query: 442 LMDIYIKCGSLGSARKLF-NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+D+Y KCG + S+ ++F DV+SW+S+I+G+A+ G ALK+F M ++P
Sbjct: 663 LVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITP 722
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ VT +GVLTACSH G V EG ++ +M N YGI P +H +C+VDLL R G + EAE+F
Sbjct: 723 DDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEF 782
Query: 561 INQMACDADIVVWKSLLAS 579
I+++ + + ++W +LL +
Sbjct: 783 IDKLEVEPNAMIWANLLGA 801
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 160/554 (28%), Positives = 262/554 (47%), Gaps = 48/554 (8%)
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQ--RNVVSWTAMIAGCSQNYQENDAIKLYI 125
PD V +LN Y G L+DA F +MP RNVV+W MI+G ++ +A+ +
Sbjct: 147 PDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFH 206
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
QM + GV + T S++ A + L ++ G +HAH IK S + ++LI MY K
Sbjct: 207 QMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQ 266
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
DAR VF I++K++ W +M+ +S+ G+ + F +M+ G + P+EF + S+
Sbjct: 267 MPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIH-PDEFTYTSIL 325
Query: 246 SACSNF-----ARIL-----------------------------------FNEIDSPDLA 265
S C+ F R L F + D
Sbjct: 326 STCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHI 385
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SWNA+I G A SLF M ++PD +++ S+L AC L G Q H
Sbjct: 386 SWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLS 445
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
+K+G ++N+ ++++ MY+KC + +A + + + + VS N++IA N E +
Sbjct: 446 VKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERS-VVSVNALIAGYALKNTKESI 504
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG-LAFDVFVMNGLMD 444
L M +KP ITF ++ C A + + Q+HC I K G L F+ L+
Sbjct: 505 -NLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLG 563
Query: 445 IYIKCGSLGSARKLFN-FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
+Y+ L A LF+ F +V W++LI G+ Q C D AL L+ MR +SP+
Sbjct: 564 MYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQA 623
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
T V VL AC+ + + +G ++ ++ + G S +VD+ A+ G V + +
Sbjct: 624 TFVTVLQACALLSSLHDGREIHSLIFHT-GFDLDELTSSALVDMYAKCGDVKSSVQVFEE 682
Query: 564 MACDADIVVWKSLL 577
+A D++ W S++
Sbjct: 683 LATKKDVISWNSMI 696
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 243/473 (51%), Gaps = 14/473 (2%)
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
V W + G +++Y ++ Y + SG P QFTF + AC+ L ++ LGR +H+
Sbjct: 13 VRQWNWRVQG-TKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHS 71
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG--IARKDVTSWGSMIAAFSKLGYE 218
VIKS S Q ALI +Y K + + AR +F+ SW ++I+ + + G
Sbjct: 72 CVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLP 131
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDSP--DLASWNALI 271
EAL F++M + P++ +V +A + ++ LF ++ P ++ +WN +I
Sbjct: 132 HEALHIFDKMRNSAV--PDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMI 189
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
+G A ++ EA++ F +M + T+ S+L A L G+ VH++ IK GF+
Sbjct: 190 SGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFE 249
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
S++ V ++++ MY KC + +A VF + + + + WN+++ Q+ + LF
Sbjct: 250 SSIYVASSLINMYGKCQMPDDARQVFDAISQK-NMIVWNAMLGVYSQNGFLSNVMELFLD 308
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M++ I PD T+ ++ CA LE+ QLH I K ++FV N L+D+Y K G+
Sbjct: 309 MISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGA 368
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
L A K F M D +SW+++I+GY Q A LF RM G+ P+ V+L +L+A
Sbjct: 369 LKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSA 428
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
C ++ ++E G + + + G+ S ++D+ ++ G + +A + M
Sbjct: 429 CGNIKVLEAG-QQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSM 480
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 195/591 (32%), Positives = 306/591 (51%), Gaps = 88/591 (14%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S +A L+ +C +S R++H I+ ++ ++ +QN +++ YGKCG EDAR FD+
Sbjct: 20 SPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDR 79
Query: 96 MPQRNVV-------------------------------SWTAMIAGCSQNYQENDAIKLY 124
MPQRN SW AM++G +Q+ + +A++ +
Sbjct: 80 MPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFF 139
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
+ M + +++FGS + AC+GL + +G Q+HA + KS + + +AL+ MY+K
Sbjct: 140 VDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKC 199
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ A+ F G+A +++ SW S+I + + G +AL F M+ +G +P+E SV
Sbjct: 200 GVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGV-EPDEITLASV 258
Query: 245 FSACSNF----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
SAC+++ AR++ + DL NAL+ A NEA +F DR
Sbjct: 259 VSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVF----DRM 314
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
L + ++ S++C YA+ + + A
Sbjct: 315 PLRNVVSETSMVCG-----------------------------------YARAASVKAAR 339
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
L+F + + + VSWN++IA Q+ + EE RLF + I P H TF +++ ACA +
Sbjct: 340 LMFSNMMEK-NVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANL 398
Query: 415 ASLEMVTQLHCYITKTGLAF------DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
A L++ Q H I K G F D+FV N L+D+Y+KCG + +F M DVV
Sbjct: 399 ADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVV 458
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
SW+++I+GYAQ G G AL++F +M G P+ VT++GVL+ACSH GLVEEG + M
Sbjct: 459 SWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSM 518
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
E G+ P ++H +C+VDLL RAGC+ EA D I M D VVW SLLA+
Sbjct: 519 RTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAA 569
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 163/604 (26%), Positives = 280/604 (46%), Gaps = 92/604 (15%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS + + + EAL + ++ + + ++ +SAC+ L L +G ++H I
Sbjct: 120 NAMVSGFAQHDRFEEALRFF-VDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALIS 178
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S+ DV + + +++MY KCG + A+ FD M RN+VSW ++I QN A++
Sbjct: 179 KSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALE 238
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE-HGSHLIAQNALIAMY 181
+++ M+ +GV P + T S++ AC+ ++ G Q+HA V+K + + + L+ NAL+ MY
Sbjct: 239 VFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMY 298
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K R+ +AR VF + ++V S SM+ +++
Sbjct: 299 AKCRRVNEARLVFDRMPLRNVVSETSMVCGYAR--------------------------- 331
Query: 242 GSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
+A AR++F+ + ++ SWNALIAG + EA+ LF ++ + P T
Sbjct: 332 ----AASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYT 387
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGF------DSNVPVCNAILTMYAKCSVLCNALL 355
+LL AC L G Q H+ I+K GF +S++ V N+++ MY KC ++ + L
Sbjct: 388 FGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCL 447
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF+ + + D VSWN++I Q+ +F +ML S KPDH+T V+ AC+
Sbjct: 448 VFERMVER-DVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAG 506
Query: 416 SLEMVTQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSL 473
+E + H T+ GLA ++D+ + G L A L M PD V W SL
Sbjct: 507 LVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSL 566
Query: 474 I----------LG------------------------YAQFGCGDEALKLFTRMRSLGVS 499
+ LG YA+ G + +++ +MR GV
Sbjct: 567 LAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVI 626
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR----AGCVH 555
CS + ++ +H++ + + + P ++ V+ L AG V
Sbjct: 627 KQ--------PGCSWIE-IQSRVHVFMVKDKRH---PLKKDIHLVLKFLTEQMKWAGYVP 674
Query: 556 EAED 559
EA+D
Sbjct: 675 EADD 678
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D F ++ +C + S ++H I KT + ++F+ N L+D Y KCG ARK+F
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 460 NFMEN-------------------------------PDVVSWSSLILGYAQFGCGDEALK 488
+ M PD SW++++ G+AQ +EAL+
Sbjct: 78 DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLL 548
F M S N + L+AC+ + + G+ ++ ++ ++ S +VD+
Sbjct: 138 FFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVY-MGSALVDMY 196
Query: 549 ARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++ G V A+ + MA +IV W SL+
Sbjct: 197 SKCGVVACAQRAFDGMAV-RNIVSWNSLIT 225
>gi|302789718|ref|XP_002976627.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
gi|300155665|gb|EFJ22296.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
Length = 734
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 194/598 (32%), Positives = 309/598 (51%), Gaps = 47/598 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S+ + Y EALV + + IR T+ ++ ACS+L ++ GRK+H ++
Sbjct: 76 LSAYAQNGHYMEALV-LSYQMDLEGIRPNSVTFLWILGACSNLGDVETGRKIHARMVFLG 134
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
D V+ IL MY KC L DA+ FD + +++VVSWTA+I SQ + A++L+
Sbjct: 135 WDTDTVVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAFSQLGRPRVALELFW 194
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M GV P + TF +I+ AC+ + ++ G +L+ I +G+ + + + MY++F
Sbjct: 195 EMDLDGVKPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFG 254
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+++A+ F + K SW +++ A+ + G+ +AL + EM HGA +P+ F +
Sbjct: 255 NLVEAKAAFDHLREKSTGSWNAIVRAYIQHGHISQALSLYKEMDVHGA-EPDTFTHVCLL 313
Query: 246 SACSNF-------------------------------------ARILFNEIDSPDLASWN 268
ACS+ A F ++ S ++ WN
Sbjct: 314 GACSSLGALEEGERIHARMGDKPDGLAGSAIVAMYAKCGGIEHAMTAFTKMSSSNVVVWN 373
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
ALIAG + EA+ L+ M L D T S+L AC G L +G VH+ I+
Sbjct: 374 ALIAGYVQGEHWQEALDLYHAMNLEGLEADIYTFSSVLGACSGAKDLSEGRAVHARIVSR 433
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
G + VP+ N ++ M+AKC L AL +F+ + ++VSWNS++ A QH F L
Sbjct: 434 GLEVVVPLQNGLVNMFAKCGSLTLALEMFRGMASR-NTVSWNSMVTAFCQHGDGGGAFEL 492
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMA--SLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
F ML +P TF ++ C+ A SL+ LH IT +G+ D V L+ +Y
Sbjct: 493 FKEMLLEGGEPHEQTFTSILNFCSHSACSSLDQGKALHQRITASGVDSDPTVATCLLTMY 552
Query: 447 I-----KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
+ KCG+L AR +F+ + +V+SW+++I+GYAQ GD AL+LF M G+ +
Sbjct: 553 LLNALAKCGALDDARAVFDGIRGKNVLSWTAMIVGYAQHARGDGALELFREMELDGIQAD 612
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
+T +L ACSH GLV G +R M ++ I P+ EH + V+D+LARAG V EAE+
Sbjct: 613 EITFTSILHACSHRGLVRVGREYFRSMVEDHAIAPSAEHYNVVMDMLARAGRVGEAEE 670
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 179/588 (30%), Positives = 290/588 (49%), Gaps = 52/588 (8%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
++Y L+ C +SL G ++H + S D L N+++ MYG CG + AR FDK
Sbjct: 4 ASYGRLLRECGLSKSLSKGMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREIFDK 63
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ RNV SWT M++ +QN +A+ L QM G+ P TF I+ ACS LG V G
Sbjct: 64 LIDRNVYSWTIMLSAYAQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLGDVETG 123
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R++HA ++ + + A++ MY+K +++ DA+ +F + RKDV SW ++I AFS+L
Sbjct: 124 RKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAFSQL 183
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--------------------------- 248
G AL F EM G +PNE F ++ +AC
Sbjct: 184 GRPRVALELFWEMDLDGV-KPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGADVFV 242
Query: 249 --------SNF-----ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
S F A+ F+ + SWNA++ H + ++A+SL+ EM
Sbjct: 243 GSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVRAYIQHGHISQALSLYKEMDVHGA 302
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD T LL AC L +G ++H+ +MG + +AI+ MYAKC + +A+
Sbjct: 303 EPDTFTHVCLLGACSSLGALEEGERIHA---RMGDKPDGLAGSAIVAMYAKCGGIEHAMT 359
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
F ++ +++ V WN++IA +Q +E L+ M ++ D TF+ V+GAC+
Sbjct: 360 AFTKM-SSSNVVVWNALIAGYVQGEHWQEALDLYHAMNLEGLEADIYTFSSVLGACSGAK 418
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
L +H I GL V + NGL++++ KCGSL A ++F M + + VSW+S++
Sbjct: 419 DLSEGRAVHARIVSRGLEVVVPLQNGLVNMFAKCGSLTLALEMFRGMASRNTVSWNSMVT 478
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL--VEEGLHLY-RIMENEY 532
+ Q G G A +LF M G P+ T +L CSH +++G L+ RI +
Sbjct: 479 AFCQHGDGGGAFELFKEMLLEGGEPHEQTFTSILNFCSHSACSSLDQGKALHQRITASGV 538
Query: 533 GIIPTREHCSCVVDL---LARAGCVHEAEDFINQMACDADIVVWKSLL 577
PT C + L LA+ G + +A + + +++ W +++
Sbjct: 539 DSDPTVATCLLTMYLLNALAKCGALDDARAVFDGIR-GKNVLSWTAMI 585
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 122/229 (53%), Gaps = 1/229 (0%)
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D + LL C +L +GM++H + + G D + + N ++ MY C + A +F
Sbjct: 2 DSASYGRLLRECGLSKSLSKGMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREIF 61
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+L + + SW +++A Q+ E L +M I+P+ +TF ++GAC+ + +
Sbjct: 62 DKL-IDRNVYSWTIMLSAYAQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLGDV 120
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
E ++H + G D V ++ +Y KC LG A+K+F+ + DVVSW+++I +
Sbjct: 121 ETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAF 180
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
+Q G AL+LF M GV PN T V +L AC+++ +E+G LY+
Sbjct: 181 SQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYMDALEDGDKLYK 229
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 74/129 (57%)
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D ++ ++ C SL ++H + ++G+ D ++ N L+ +Y CG +G AR++F
Sbjct: 2 DSASYGRLLRECGLSKSLSKGMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREIF 61
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ + + +V SW+ ++ YAQ G EAL L +M G+ PN VT + +L ACS++G VE
Sbjct: 62 DKLIDRNVYSWTIMLSAYAQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLGDVE 121
Query: 520 EGLHLYRIM 528
G ++ M
Sbjct: 122 TGRKIHARM 130
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 189/616 (30%), Positives = 325/616 (52%), Gaps = 43/616 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + +L L+ +AL Y ++ T+ +I++C+ + L+LG VH+H +
Sbjct: 90 NSIIRALTHNGLFTQAL-GYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAM 148
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG-CSQNYQENDAI 121
+ D+ + N +++MY + L++AR F++M R+ VSW ++I+G CS + E DA+
Sbjct: 149 EMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWE-DAL 207
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+Y + +G++P FT S++ AC L +V G +H + K +I N L++MY
Sbjct: 208 DMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMY 267
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML------------ 229
KF+R+ +AR VFS +A KD +W +MI +++LG ++ F +M+
Sbjct: 268 FKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDMLSITS 327
Query: 230 ------HHGAYQPNEFI----FGS--------------VFSACSNF--ARILFNEIDSPD 263
G Q +F+ GS +++ C + A+ +F+ D
Sbjct: 328 TIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKD 387
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+WN+LI G E + F M+ E PD +T LL + QG +H
Sbjct: 388 SVTWNSLINGYTQSGYYKEGLESFKMMK-MERKPDSVTFVLLLSIFSQLADINQGRGIHC 446
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+IK GF++ + + N++L +YAKC + + L VF + + D +SWN++IA+ + +
Sbjct: 447 DVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH-DIISWNTVIASSVHFDDCT 505
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
F++ + M + PD T ++ C+ +A ++H YI K+G +V + N L+
Sbjct: 506 VGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALI 565
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
++Y KCGSL + K+F +M+ DVV+W++LI + +G G +ALK F M GV P+ V
Sbjct: 566 EMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSV 625
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
+ + ACSH G+V+EGL + M+ +Y + P EH +CVVDLLAR+G + +AE+FI
Sbjct: 626 AFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILS 685
Query: 564 MACDADIVVWKSLLAS 579
M D +W +LL++
Sbjct: 686 MPMKPDASLWGALLSA 701
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 156/596 (26%), Positives = 276/596 (46%), Gaps = 51/596 (8%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
NNT + + L+ SS ++ R VH I+ S V+ +++ Y +
Sbjct: 11 NNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDP 70
Query: 87 EDARMGFDKM-PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
+ F + P NV W ++I + N A+ Y +M + + P FTF S+I +
Sbjct: 71 ISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINS 130
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
C+ + + LG +H H ++ S L NALI MY++F + +AR VF ++ +D SW
Sbjct: 131 CARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSW 190
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------- 251
S+I+ + G+ +AL +++ G P+ F SV AC +
Sbjct: 191 NSLISGYCSNGFWEDALDMYHKFRMTGMV-PDCFTMSSVLLACGSLMAVKEGVAVHGVIE 249
Query: 252 --------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
AR +F+++ D +WN +I G A ++
Sbjct: 250 KIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVK 309
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
LF +M D +PD L++ S + AC L G VH Y+I GF+ + CN ++ MYA
Sbjct: 310 LFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYA 368
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
KC L A VF + K DSV+WNS+I Q +E F +M+ + KPD +TF
Sbjct: 369 KCGDLLAAQEVF-DTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFV 426
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
++ +++A + +HC + K G ++ + N L+D+Y KCG + K+F++M
Sbjct: 427 LLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH 486
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LH 523
D++SW+++I F ++ MR+ G+ P+ T++G+L CS + + +G +H
Sbjct: 487 DIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIH 546
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
Y +P + ++++ ++ G + M + D+V W +L+++
Sbjct: 547 GYIFKSGFESNVPI---GNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISA 598
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 165/379 (43%), Gaps = 49/379 (12%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
I AC LQ+G+ VH +++ S + D V N +++MY KCG L A+ FD ++
Sbjct: 329 IRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDS 388
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
V+W ++I G +Q+ + ++ + +M++ P TF ++ S L + GR +H
Sbjct: 389 VTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCD 447
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
VIK + LI N+L+ +Y K + D VFS ++ D+ SW ++IA+
Sbjct: 448 VIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVG 507
Query: 222 LCHFNEMLHHGAYQPNE------------------------FIFGS-------------- 243
NEM G P+E +IF S
Sbjct: 508 FQMINEMRTEG-LMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIE 566
Query: 244 VFSACSNFARIL--FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
++S C + + F + D+ +W ALI+ + +A+ F +M +LPD +
Sbjct: 567 MYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVA 626
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV-PVCN---AILTMYAKCSVLCNALLVF 357
+ + AC + +G++ + +M D N+ P ++ + A+ +L A
Sbjct: 627 FIAFIFACSHSGMVKEGLR---FFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFI 683
Query: 358 KELGKNADSVSWNSIIAAC 376
+ D+ W ++++AC
Sbjct: 684 LSMPMKPDASLWGALLSAC 702
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 184/585 (31%), Positives = 305/585 (52%), Gaps = 42/585 (7%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P ++ ++SAC + SL++G ++H +L D + N ++++Y GSL A F
Sbjct: 271 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFS 330
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
M QR+ V++ +I G SQ A++L+ +M G+ P T S++ ACS G++
Sbjct: 331 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFS 390
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+QLHA+ K S+ + AL+ +Y K I A N F ++V W M+ A+
Sbjct: 391 GQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGL 450
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE---------------- 258
L + F +M PN++ + S+ C + E
Sbjct: 451 LDDLRNSFRIFRQM-QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAY 509
Query: 259 -----ID-------------------SPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
ID D+ SW +IAG ++ ++A++ F +M DR
Sbjct: 510 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 569
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ D + + + + AC G L +G Q+H+ GF S++P NA++T+Y+KC + A
Sbjct: 570 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAY 629
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
L F++ + D+++WN++++ Q EE R+F+RM I ++ TF + A ++
Sbjct: 630 LAFEQT-EAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASET 688
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
A+++ Q+H ITKTG + V N ++ +Y KCGS+ A+K F + + VSW+++I
Sbjct: 689 ANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMI 748
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
Y++ G G EAL F +M V PN VTLVGVL+ACSH+GLV++G+ + M EYG+
Sbjct: 749 NAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGL 808
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P EH CVVD+L RAG + A+DFI +M + D +VW++LL++
Sbjct: 809 APKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSA 853
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 178/599 (29%), Positives = 280/599 (46%), Gaps = 52/599 (8%)
Query: 25 SQNNTNIRIRPSTYAGLISAC-SSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
S N IR T L+ C + SL GRK+H IL + L +L+ Y
Sbjct: 57 SVENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFK 116
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G L+ A FD+MP+R + +W MI + L+ +M+ V P + TF ++
Sbjct: 117 GDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVL 176
Query: 144 KACSGLGSVCLG--RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
+AC G GSV Q+HA +I G I N LI +Y++ + AR VF G+ KD
Sbjct: 177 EACRG-GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKD 235
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------- 251
+SW +MI+ SK E+EA+ F +M G P + F SV SAC
Sbjct: 236 HSSWVAMISGLSKNECEVEAIRLFCDMYVLGI-MPTPYAFSSVLSACKKIESLEIGEQLH 294
Query: 252 ------------------------------ARILFNEIDSPDLASWNALIAGVASHSNAN 281
A +F+ + D ++N LI G++
Sbjct: 295 GLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 354
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
+AM LF M+ L PD T+ SL+ AC TL+ G Q+H+Y K+GF SN + A+L
Sbjct: 355 KAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALL 414
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+YAKCS + AL F E + + V WN ++ A + FR+F +M +I P+
Sbjct: 415 NLYAKCSDIETALNYFLET-EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 473
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
T+ ++ C ++ LE+ Q+H I KT + +V + L+D+Y K G L +A +
Sbjct: 474 YTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 533
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
DVVSW+++I GY Q+ D+AL F +M G+ + V L ++AC+ + ++EG
Sbjct: 534 FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 593
Query: 522 --LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+H + +P + + +V L ++ G + EA Q D + W +L++
Sbjct: 594 QQIHAQACVSGFSSDLPFQ---NALVTLYSKCGNIEEAYLAFEQTEA-GDNIAWNALVS 648
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 154/591 (26%), Positives = 290/591 (49%), Gaps = 45/591 (7%)
Query: 28 NTNIRIRPSTYAGLISACSSLR-SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
N N+ T++G++ AC + + ++H I+ ++ N ++++Y + G +
Sbjct: 162 NENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFV 221
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
+ AR FD + ++ SW AMI+G S+N E +AI+L+ M G+MP + F S++ AC
Sbjct: 222 DRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSAC 281
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
+ S+ +G QLH V+K S NAL+++Y ++ A ++FS ++++D ++
Sbjct: 282 KKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYN 341
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHG---------------------------------- 232
++I S+ GY +A+ F M G
Sbjct: 342 TLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKL 401
Query: 233 AYQPNEFIFGS---VFSACSNFARIL--FNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
+ N+ I G+ +++ CS+ L F E + ++ WN ++ + + +F
Sbjct: 402 GFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIF 461
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
+M+ E++P+ T S+L CI L G Q+HS IIK F N VC+ ++ MYAK
Sbjct: 462 RQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKL 521
Query: 348 SVLCNAL-LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
L A ++ + GK D VSW ++IA Q+N ++ F +ML I+ D + +
Sbjct: 522 GKLDTAWDILIRFAGK--DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 579
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
+ ACA + +L+ Q+H +G + D+ N L+ +Y KCG++ A F E D
Sbjct: 580 AVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGD 639
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
++W++L+ G+ Q G +EAL++F RM G+ N T + A S +++G ++
Sbjct: 640 NIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHA 699
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
++ + G E C+ ++ + A+ G + +A+ +++ + V W +++
Sbjct: 700 VI-TKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNE-VSWNAMI 748
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 171/329 (51%), Gaps = 10/329 (3%)
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+F+E+ + +WN +I +AS S + + LF M + + P+ T +L AC G
Sbjct: 125 VFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSV 184
Query: 315 LYQGM-QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
+ + Q+H+ II G + VCN ++ +Y++ + A VF L D SW ++I
Sbjct: 185 AFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLK-DHSSWVAMI 243
Query: 374 AACLQHNQAE-ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
+ L N+ E E RLF M I P F+ V+ AC K+ SLE+ QLH + K G
Sbjct: 244 SG-LSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 302
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
+ D +V N L+ +Y GSL SA +F+ M D V++++LI G +Q G G++A++LF R
Sbjct: 303 SSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 362
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLAR 550
M+ G+ P+ TL ++ ACS G + G LH Y + G + +++L A+
Sbjct: 363 MQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYT---TKLGFASNDKIEGALLNLYAK 419
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ A ++ + + ++V+W +L +
Sbjct: 420 CSDIETALNYFLETEVE-NVVLWNVMLVA 447
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 158/293 (53%), Gaps = 18/293 (6%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+SAC+ L++L+ G+++H +S D+ QN ++ +Y KCG++E+A + F++ +
Sbjct: 581 VSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDN 640
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
++W A+++G Q+ +A++++ +M + G+ FTFGS +KA S ++ G+Q+HA
Sbjct: 641 IAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAV 700
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
+ K+ + S NA+I+MY K I DA+ F ++ K+ SW +MI A+SK G+ EA
Sbjct: 701 ITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEA 760
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS-----PDLASWNALI 271
L F++M+H +PN V SACS+ + F +++ P + ++
Sbjct: 761 LDSFDQMIHSNV-RPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVV 819
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
+ + A EM + PD L +LL AC+ +++ M++ +
Sbjct: 820 DMLTRAGLLSRAKDFILEM---PIEPDALVWRTLLSACV----VHKNMEIGEF 865
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 203/466 (43%), Gaps = 60/466 (12%)
Query: 14 LYNEALVAY---DFSQNNTNI-------RIRPS--TYAGLISACSSLRSLQLGRKVHDHI 61
L+N LVAY D +N+ I I P+ TY ++ C L L+LG ++H I
Sbjct: 440 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 499
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ + Q + + + +++MY K G L+ A + ++VVSWT MIAG +Q ++ A+
Sbjct: 500 IKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 559
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+ QML G+ + + + AC+GL ++ G+Q+HA S S L QNAL+ +Y
Sbjct: 560 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 619
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
+K I +A F D +W ++++ F + G EAL F M G N F F
Sbjct: 620 SKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGI-DSNNFTF 678
Query: 242 GSVFSACSNFARI----------------------------------------LFNEIDS 261
GS A S A + F E+
Sbjct: 679 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSM 738
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ- 320
+ SWNA+I + H +EA+ F +M + P+ +T+ +L AC + +G++
Sbjct: 739 KNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEY 798
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
S + G ++ M + +L A E+ D++ W ++++AC+ H
Sbjct: 799 FESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHK 858
Query: 381 QAEELFRLFSRMLASQIKPD----HITFNDVMGACAKMASLEMVTQ 422
E F+ +++P+ ++ +++ C K + ++ Q
Sbjct: 859 NME--IGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQ 902
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 1/158 (0%)
Query: 11 KQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
+Q+ NE + N I T+ + A S +++ G++VH I + +
Sbjct: 651 QQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 710
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ N I++MY KCGS+ DA+ F ++ +N VSW AMI S++ ++A+ + QM+ S
Sbjct: 711 EVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHS 770
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG 168
V P T ++ ACS +G V G + + + +E+G
Sbjct: 771 NVRPNHVTLVGVLSACSHIGLVDKGIE-YFESMNTEYG 807
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 193/556 (34%), Positives = 298/556 (53%), Gaps = 54/556 (9%)
Query: 35 PSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
P T+ LIS+ + L S+ KV D + P++ N IL+ Y K G + +
Sbjct: 42 PETFLLNNLISSYAKLGSIPYACKVFDQM----PHPNLYSWNTILSAYSKLGRVSEMEYL 97
Query: 93 FDKMPQRNVVSWTAMI---AGCSQNYQENDAIKLYIQMLQSGVMPGQF-----TFGSIIK 144
FD MP+R+ VSW ++I AGC YQ ++K Y ML++ G F TF +++
Sbjct: 98 FDAMPRRDGVSWNSLISGYAGCGLIYQ---SVKAYNLMLKND---GSFNLNRITFSTLLI 151
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
S G V LGRQ+H HV+K S++ + L+ MY+K I AR VF + K+V
Sbjct: 152 LASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVM 211
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDL 264
+ ++I + G ++ + LF E+ D
Sbjct: 212 YNTLIMGLMRCGRVEDS-------------------------------KRLFFEMRERDS 240
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
SW ++I G + +A+ +F EM+ L D T S+L AC G + L +G QVH+Y
Sbjct: 241 ISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAY 300
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQHNQAE 383
II+ + N+ V +A++ MY KC + +A VFK++ KN VSW +++ Q+ +E
Sbjct: 301 IIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNV--VSWTAMLVGYGQNGYSE 358
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
E + FS M I+PD T V+ +CA +ASLE Q H +GL + V N L+
Sbjct: 359 EAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALV 418
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
+Y KCGS+ + +LFN + D V+W++L+ GYAQFG +E + LF M + G+ P+ V
Sbjct: 419 TLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKV 478
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
T +GVL+ACS GLVE+G ++ M NE+GI+P ++H +C++DL +RAG + EA +FIN+
Sbjct: 479 TFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINK 538
Query: 564 MACDADIVVWKSLLAS 579
M D + W +LL+S
Sbjct: 539 MPFSPDAISWATLLSS 554
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 216/450 (48%), Gaps = 80/450 (17%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFS-QNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
N +S L +++ AY+ +N+ + + T++ L+ S ++LGR++H H+
Sbjct: 110 NSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHV 169
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVV------------------- 102
+ V + + +++MY K G + AR FD++P++NVV
Sbjct: 170 VKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSK 229
Query: 103 ------------SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
SWT+MI G +QN + DAI ++ +M + Q+TFGS++ AC G+
Sbjct: 230 RLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVM 289
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G+Q+HA++I++++ ++ +AL+ MY K I A VF + K+V SW +M+
Sbjct: 290 ALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLV 349
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------- 254
+ + GY EA+ F++M +G +P++F GSV S+C+N A +
Sbjct: 350 GYGQNGYSEEAVKTFSDMQKYGI-EPDDFTLGSVISSCANLASLEEGAQFHARALTSGLI 408
Query: 255 ------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
LFNEI D +W AL++G A ANE + LF M
Sbjct: 409 SFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESM 468
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCN---AILTMYAK 346
L PD +T +L AC + +G Q+ S I + G VP+ + ++ ++++
Sbjct: 469 LAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGI---VPIQDHYTCMIDLFSR 525
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+ A ++ + D++SW +++++C
Sbjct: 526 AGRIEEARNFINKMPFSPDAISWATLLSSC 555
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 138/287 (48%), Gaps = 32/287 (11%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN Y+E V I T +IS+C++L SL+ G + H L S +
Sbjct: 353 QNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFIT 412
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ N ++ +YGKCGS+ED+ F+++ ++ V+WTA+++G +Q + N+ I L+ ML G
Sbjct: 413 VSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHG 472
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILD 189
+ P + TF ++ ACS G V G Q+ +I +EHG I + +I ++++ RI +
Sbjct: 473 LKPDKVTFIGVLSACSRAGLVEKGNQIFESMI-NEHGIVPIQDHYTCMIDLFSRAGRIEE 531
Query: 190 ARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
ARN + + D SW +++++ C F + G + EF+
Sbjct: 532 ARNFINKMPFSPDAISWATLLSS-----------CRFYGNMDIGKWAA-EFLM------- 572
Query: 249 SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
E+D + AS+ L + A+ E L +MRD+ L
Sbjct: 573 ---------ELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGL 610
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 189/616 (30%), Positives = 325/616 (52%), Gaps = 43/616 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + +L L+ +AL Y ++ T+ +I++C+ + L+LG VH+H +
Sbjct: 90 NSIIRALTHNGLFTQAL-GYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAM 148
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG-CSQNYQENDAI 121
+ D+ + N +++MY + L++AR F++M R+ VSW ++I+G CS + E DA+
Sbjct: 149 EMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWE-DAL 207
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+Y + +G++P FT S++ AC L +V G +H + K +I N L++MY
Sbjct: 208 DMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMY 267
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML------------ 229
KF+R+ +AR VFS +A KD +W +MI +++LG ++ F +M+
Sbjct: 268 FKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDMLSITS 327
Query: 230 ------HHGAYQPNEFI----FGS--------------VFSACSNF--ARILFNEIDSPD 263
G Q +F+ GS +++ C + A+ +F+ D
Sbjct: 328 TIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKD 387
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+WN+LI G E + F M+ E PD +T LL + QG +H
Sbjct: 388 SVTWNSLINGYTQSGYYKEGLESFKMMK-MERKPDSVTFVLLLSIFSQLADINQGRGIHC 446
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+IK GF++ + + N++L +YAKC + + L VF + + D +SWN++IA+ + +
Sbjct: 447 DVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH-DIISWNTVIASSVHFDDCT 505
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
F++ + M + PD T ++ C+ +A ++H YI K+G +V + N L+
Sbjct: 506 VGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALI 565
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
++Y KCGSL + K+F +M+ DVV+W++LI + +G G +ALK F M GV P+ V
Sbjct: 566 EMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSV 625
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
+ + ACSH G+V+EGL + M+ +Y + P EH +CVVDLLAR+G + +AE+FI
Sbjct: 626 AFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILS 685
Query: 564 MACDADIVVWKSLLAS 579
M D +W +LL++
Sbjct: 686 MPMKPDASLWGALLSA 701
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 156/596 (26%), Positives = 276/596 (46%), Gaps = 51/596 (8%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
NNT + + L+ SS ++ R VH I+ S V+ +++ Y +
Sbjct: 11 NNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDP 70
Query: 87 EDARMGFDKM-PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
+ F + P NV W ++I + N A+ Y +M + + P FTF S+I +
Sbjct: 71 ISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINS 130
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
C+ + + LG +H H ++ S L NALI MY++F + +AR VF ++ +D SW
Sbjct: 131 CARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSW 190
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------- 251
S+I+ + G+ +AL +++ G P+ F SV AC +
Sbjct: 191 NSLISGYCSNGFWEDALDMYHKFRMTGMV-PDCFTMSSVLLACGSLMAVKEGVAVHGVIE 249
Query: 252 --------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
AR +F+++ D +WN +I G A ++
Sbjct: 250 KIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVK 309
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
LF +M D +PD L++ S + AC L G VH Y+I GF+ + CN ++ MYA
Sbjct: 310 LFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYA 368
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
KC L A VF + K DSV+WNS+I Q +E F +M+ + KPD +TF
Sbjct: 369 KCGDLLAAQEVF-DTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFV 426
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
++ +++A + +HC + K G ++ + N L+D+Y KCG + K+F++M
Sbjct: 427 LLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH 486
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LH 523
D++SW+++I F ++ MR+ G+ P+ T++G+L CS + + +G +H
Sbjct: 487 DIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIH 546
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
Y +P + ++++ ++ G + M + D+V W +L+++
Sbjct: 547 GYIFKSGFESNVPI---GNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISA 598
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 165/379 (43%), Gaps = 49/379 (12%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
I AC LQ+G+ VH +++ S + D V N +++MY KCG L A+ FD ++
Sbjct: 329 IRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDS 388
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
V+W ++I G +Q+ + ++ + +M++ P TF ++ S L + GR +H
Sbjct: 389 VTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCD 447
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
VIK + LI N+L+ +Y K + D VFS ++ D+ SW ++IA+
Sbjct: 448 VIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVG 507
Query: 222 LCHFNEMLHHGAYQPNE------------------------FIFGS-------------- 243
NEM G P+E +IF S
Sbjct: 508 FQMINEMRTEG-LMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIE 566
Query: 244 VFSACSNFARIL--FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
++S C + + F + D+ +W ALI+ + +A+ F +M +LPD +
Sbjct: 567 MYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVA 626
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV-PVCN---AILTMYAKCSVLCNALLVF 357
+ + AC + +G++ + +M D N+ P ++ + A+ +L A
Sbjct: 627 FIAFIFACSHSGMVKEGLR---FFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFI 683
Query: 358 KELGKNADSVSWNSIIAAC 376
+ D+ W ++++AC
Sbjct: 684 LSMPMKPDASLWGALLSAC 702
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 191/623 (30%), Positives = 336/623 (53%), Gaps = 58/623 (9%)
Query: 6 VSSLCKQNLYNEALVAY-DFSQNNTNIRIRPSTY--AGLISACSSL--RSLQLGRKVHDH 60
VS+ +Y E+LV + +F + + P+ Y + I ACS L R + ++
Sbjct: 117 VSACNHHGIYEESLVVFLEFWRTRKD---SPNEYILSSFIQACSGLDGRGRWMVFQLQSF 173
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
++ S DV + +++ Y K G+++ AR+ FD +P+++ V+WT MI+GC + + +
Sbjct: 174 LVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVS 233
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ--NALI 178
++L+ Q+++ V+P + +++ ACS L + G+Q+HAH+++ +G + A N LI
Sbjct: 234 LQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR--YGLEMDASLMNVLI 291
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
Y K R++ A +F+G+ K++ SW ++++ + + EA+ F M G +P+
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG-LKPDM 350
Query: 239 FIFGSVFSACSNF----------------------------------------ARILFNE 258
+ S+ ++C++ AR +F+
Sbjct: 351 YACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDI 410
Query: 259 IDSPDLASWNALIAG---VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
+ D+ +NA+I G + + +EA+++F +MR R + P LT SLL A +L
Sbjct: 411 FAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSL 470
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
Q+H + K G + ++ +A++ +Y+ C L ++ LVF E+ K D V WNS+ A
Sbjct: 471 GLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM-KVKDLVIWNSMFAG 529
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
+Q ++ EE LF + S+ +PD TF +++ A +AS+++ + HC + K GL +
Sbjct: 530 YVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECN 589
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
++ N L+D+Y KCGS A K F+ + DVV W+S+I YA G G +AL++ +M S
Sbjct: 590 PYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMS 649
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
G+ PN +T VGVL+ACSH GLVE+GL + +M +GI P EH C+V LL RAG ++
Sbjct: 650 EGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLN 708
Query: 556 EAEDFINQMACDADIVVWKSLLA 578
+A + I +M +VW+SLL+
Sbjct: 709 KARELIEKMPTKPAAIVWRSLLS 731
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 170/610 (27%), Positives = 288/610 (47%), Gaps = 58/610 (9%)
Query: 19 LVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
V DF + IR R +A L+ +S L VH I++ + D L N ++N
Sbjct: 30 FVNADFP-STIGIRGR-REFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILIN 87
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV-MPGQF 137
+Y + G + AR F+KMP+RN+VSW+ M++ C+ + +++ ++++ ++ P ++
Sbjct: 88 LYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEY 147
Query: 138 TFGSIIKACSGLGSVCLGR----QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
S I+ACSGL GR QL + ++KS + LI Y K I AR V
Sbjct: 148 ILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLV 205
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-- 251
F + K +W +MI+ K+G +L F +++ P+ +I +V SACS
Sbjct: 206 FDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVV-PDGYILSTVLSACSILPF 264
Query: 252 --------------------------------------ARILFNEIDSPDLASWNALIAG 273
A LFN + + ++ SW L++G
Sbjct: 265 LEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSG 324
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
++ EAM LF+ M L PD S+L +C L G QVH+Y IK ++
Sbjct: 325 YKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGND 384
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL---FRLFS 390
V N+++ MYAKC L +A VF ++ AD V +N++I + EL +F
Sbjct: 385 SYVTNSLIDMYAKCDCLTDARKVF-DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
M I+P +TF ++ A A + SL + Q+H + K GL D+F + L+D+Y C
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
L +R +F+ M+ D+V W+S+ GY Q +EAL LF ++ P+ T ++T
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 511 ACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
A ++ V+ G + ++++ G+ + ++D+ A+ G +A + A D
Sbjct: 564 AAGNLASVQLGQEFHCQLLKR--GLECNPYITNALLDMYAKCGSPEDAHKAFDS-AASRD 620
Query: 570 IVVWKSLLAS 579
+V W S+++S
Sbjct: 621 VVCWNSVISS 630
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 191/419 (45%), Gaps = 50/419 (11%)
Query: 11 KQN-LYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQ 67
KQN L+ EA+ + + + ++P YA ++++C+SL +L G +VH + + +
Sbjct: 326 KQNALHKEAM---ELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLG 382
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ---NYQENDAIKLY 124
D + N +++MY KC L DAR FD +VV + AMI G S+ ++ ++A+ ++
Sbjct: 383 NDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIF 442
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
M + P TF S+++A + L S+ L +Q+H + K + A +ALI +Y+
Sbjct: 443 RDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNC 502
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ D+R VF + KD+ W SM A + + EAL F E L +P+EF F ++
Sbjct: 503 YCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLE-LQLSRERPDEFTFANM 561
Query: 245 FSACSNFARI----------------------------------------LFNEIDSPDL 264
+A N A + F+ S D+
Sbjct: 562 VTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDV 621
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
WN++I+ A+H +A+ + +M + P+ +T +L AC + G++
Sbjct: 622 VCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFEL 681
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+++ G + ++++ + L A + +++ ++ W S+++ C + E
Sbjct: 682 MLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVE 740
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 190/586 (32%), Positives = 308/586 (52%), Gaps = 45/586 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+ Y L+ AC +SL +K+H H L + D + + + +Y C + AR FD+
Sbjct: 9 NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+P +V+ W +I + N + AI LY ML GV P ++T+ ++KACSGL ++ G
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
++H+H S + AL+ Y K +++A+ +FS ++ +DV +W +MIA S
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 216 GY-------------------------------ELEALCHFNEMLHHGAYQPNEFIFGSV 244
G E +AL H + HG F G V
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKAL--HGYCVRRSFDNGVV 246
Query: 245 FSA----------CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
C +AR +F+ + + SW+A+I G EA+ LF +M ++
Sbjct: 247 VGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKD 306
Query: 295 LL-PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ P +T+ S+L AC L +G ++H YIIK+G ++ + N +L+MYAKC V+ +A
Sbjct: 307 AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDA 366
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
+ F + DSVS+++I++ C+Q+ A +F M S I PD T V+ AC+
Sbjct: 367 IRFFDXMNPK-DSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSH 425
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+A+L+ H Y+ G A D + N L+D+Y KCG + AR++FN M+ D+VSW+++
Sbjct: 426 LAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAM 485
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I+GY G G EAL LF + +LG+ P+ +T + +L++CSH GLV EG + M ++
Sbjct: 486 IIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFS 545
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
I+P EHC C+VD+L RAG + EA FI M + D+ +W +LL++
Sbjct: 546 IVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 591
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 150/566 (26%), Positives = 261/566 (46%), Gaps = 63/566 (11%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
A D + ++ +RP+ TY ++ ACS L +++ G ++H H + + DV + +++
Sbjct: 93 AIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVD 152
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
Y KCG L +A+ F M R+VV+W AMIAGCS +DA++L +QM + G+ P T
Sbjct: 153 FYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSST 212
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
++ ++ G+ LH + ++ + ++ L+ MY K +L AR +F +
Sbjct: 213 IVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMG 272
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---- 254
++ SW +MI + EAL F++M+ A P GSV AC+ +
Sbjct: 273 VRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGR 332
Query: 255 ------------------------------------LFNEIDSPDLASWNALIAGVASHS 278
F+ ++ D S++A+++G +
Sbjct: 333 KLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNG 392
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
NA A+S+F M+ + PD T+ +L AC L G H Y+I GF ++ +CN
Sbjct: 393 NAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICN 452
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
A++ MY+KC + A VF + ++ D VSWN++I H E LF +LA +K
Sbjct: 453 ALIDMYSKCGKISFAREVFNRMDRH-DIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLK 511
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG----LMDIYIKCGSLGS 454
PD ITF ++ +C+ +V + + F + ++DI + G +
Sbjct: 512 PDDITFICLLSSCSHSG---LVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDE 568
Query: 455 ARKLFNFME-NPDVVSWSSLILG---YAQFGCGDEALKLFTRMRSLGV--SPNLVTLVGV 508
A M PDV WS+L+ + G+E K +++SLG + N V L +
Sbjct: 569 AHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSK---KIQSLGPESTGNFVLLSNI 625
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGI 534
+A G ++ H+ RI + ++G+
Sbjct: 626 YSA---AGRWDDAAHI-RITQKDWGL 647
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 166/339 (48%), Gaps = 18/339 (5%)
Query: 5 YVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLS 64
YV S C + EAL +D + P T ++ AC+ L L GRK+H +I+
Sbjct: 286 YVXSDCMK----EALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKL 341
Query: 65 KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
D++L N +L+MY KCG ++DA FD M ++ VS++A+++GC QN A+ ++
Sbjct: 342 GXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIF 401
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
M SG+ P T ++ ACS L ++ G H ++I + + NALI MY+K
Sbjct: 402 RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKC 461
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+I AR VF+ + R D+ SW +MI + G +EAL F+++L G +P++ F +
Sbjct: 462 GKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG-LKPDDITFICL 520
Query: 245 FSACSNF-----ARILFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
S+CS+ R+ F+ + P + ++ + +EA +R+
Sbjct: 521 LSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHF---IRNMP 577
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
PD +LL AC + G +V I +G +S
Sbjct: 578 FEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPEST 616
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 184/587 (31%), Positives = 308/587 (52%), Gaps = 45/587 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
ST+A ++SA +++++ G+++H ++ +V + + ++N+Y KCG DA+ FD
Sbjct: 326 STFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDL 385
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
++N+V W AM+ G QN +AI+++ M++ + +FTF SI+ AC+ L S LG
Sbjct: 386 SCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLG 445
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+Q+H IK+ L NA + MY+K+ I DA+ +FS I KD SW ++ ++
Sbjct: 446 KQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQN 505
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
E EA+C M HG P++ F + +ACSN
Sbjct: 506 LEEEEAVCMLKRMRLHG-ITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAV 564
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+R +F ++D+ + NALIAG ++N +EA+ LF ++ L
Sbjct: 565 GSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGL 624
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG--FDSNVPVCNAILTMYAKCSVLCNA 353
P +T S+L C G L G QVH Y +K G +D + + ++ +Y K +L +A
Sbjct: 625 KPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTL-LGVSLAGIYLKSKMLEDA 683
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
+ E+ + + W +II+ Q+ + F RM ++ D TF V+ AC+
Sbjct: 684 NKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSD 743
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP-DVVSWSS 472
+ + ++H ITK+G + L+D+Y KCG + S+ + F ++N D++ W+S
Sbjct: 744 VTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNS 803
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
+I+G+A+ G DEAL LF +M L + P+ VT +GVL AC+H GL+ EG H + M Y
Sbjct: 804 MIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVY 863
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G+ P +H +C +DLL R G + EA++ I+Q+ D VVW + LA+
Sbjct: 864 GLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAA 910
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/530 (28%), Positives = 268/530 (50%), Gaps = 11/530 (2%)
Query: 49 RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMI 108
R Q R +H IL L + ++ +Y K G + A +R + ++++
Sbjct: 70 RHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLL 129
Query: 109 AGCSQNYQENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
+ +++ D + + + +G P QF ++ ACS +G + GRQ+H V+KS
Sbjct: 130 SCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGF 189
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
S + + AL+ MY K + +AR VF GIA D W SMIA + ++G EAL F+
Sbjct: 190 SSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSR 249
Query: 228 MLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANE 282
M G+ P++ ++ S ++ R+ L ++ +P +WNA+I+G A
Sbjct: 250 MDKMGS-APDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFN 308
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
+ L+ +MR L P T S+L A +G Q+H+ + G D+NV V ++++
Sbjct: 309 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLIN 368
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
+YAKC +A VF +L + V WN+++ +Q+ EE R+F M+ ++ D
Sbjct: 369 LYAKCGCPSDAKNVF-DLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEF 427
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
TF ++GAC ++S + Q+HC K + +FV N +D+Y K G++G A+ LF+ +
Sbjct: 428 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 487
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
D +SW++L +G AQ +EA+ + RMR G++P+ V+ + ACS++ E G
Sbjct: 488 PYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGK 547
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
++ + +YGI S ++DL ++ G V + Q+ DA +V
Sbjct: 548 QIH-CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQV--DASSIV 594
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 152/502 (30%), Positives = 250/502 (49%), Gaps = 39/502 (7%)
Query: 34 RPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP + A ++SACS + L GR+VH ++ S V + +++MY KCG + +AR
Sbjct: 155 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 214
Query: 92 GFDKMPQRNVVSWTAMIA-----GCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
FD + + + W++MIA GC YQE A+ L+ +M + G P Q T +II
Sbjct: 215 VFDGIACPDTICWSSMIACYHRVGC---YQE--ALALFSRMDKMGSAPDQVTLVTII--- 266
Query: 147 SGLGSVCLGRQLHAH-VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
S L S GR HA ++K +A NA+I+ + + + ++ KD+ SW
Sbjct: 267 STLASS--GRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLY-----KDMRSW 319
Query: 206 G---------SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS-----ACSNF 251
G SM++A + + +E + HG N F+ S+ + C +
Sbjct: 320 GLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHG-LDANVFVGSSLINLYAKCGCPSD 378
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
A+ +F+ ++ WNA++ G + EA+ +F M L D T S+L AC
Sbjct: 379 AKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTY 438
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+ Y G QVH IK D ++ V NA L MY+K + +A +F L DS+SWN+
Sbjct: 439 LSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALF-SLIPYKDSISWNA 497
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+ Q+ + EE + RM I PD ++F+ + AC+ + + E Q+HC K G
Sbjct: 498 LTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYG 557
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
+ + V + L+D+Y K G + S+RK+F ++ +V ++LI G+ Q DEA++LF
Sbjct: 558 ICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQ 617
Query: 492 RMRSLGVSPNLVTLVGVLTACS 513
++ G+ P+ VT +L+ CS
Sbjct: 618 QVLKDGLKPSSVTFSSILSGCS 639
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 198/435 (45%), Gaps = 49/435 (11%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QNL E V I +++ I+ACS++R+ + G+++H + +
Sbjct: 504 QNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHA 563
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ + ++++Y K G +E +R F ++ ++V A+IAG QN E++AI+L+ Q+L+ G
Sbjct: 564 VGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDG 623
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE--HGSHLIAQNALIAMYTKFDRILD 189
+ P TF SI+ CSG + +G+Q+H + +KS + L+ +L +Y K + D
Sbjct: 624 LKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGV-SLAGIYLKSKMLED 682
Query: 190 ARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
A + + + K++ W ++I+ +++ GY +L F M H + +E F SV AC
Sbjct: 683 ANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRM-RHCNVRSDEATFASVLKAC 741
Query: 249 SNFARI----------------------------------------LFNEI-DSPDLASW 267
S+ F E+ + D+ W
Sbjct: 742 SDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPW 801
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
N++I G A + A+EA+ LF +M + ++ PD +T +L AC + +G + K
Sbjct: 802 NSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRK 861
Query: 328 M-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+ G + + + + L A +L D V W + +AAC H EE
Sbjct: 862 VYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKD-EERG 920
Query: 387 RLFSRMLASQIKPDH 401
++ +R L +++P +
Sbjct: 921 KIAARKLV-ELEPQY 934
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 155/322 (48%), Gaps = 22/322 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N ++ + N +EA+ + Q ++PS T++ ++S CS + +G++VH +
Sbjct: 597 NALIAGFVQNNNEDEAIQLF---QQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCY 653
Query: 61 ILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDKMP-QRNVVSWTAMIAGCSQNYQEN 118
L S D +L + +Y K LEDA +MP +N+ WTA+I+G +QN +
Sbjct: 654 TLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGD 713
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
++ + +M V + TF S++KACS + + G+++H + KS GS+ A +ALI
Sbjct: 714 HSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALI 773
Query: 179 AMYTKFDRILDARNVFSGIARK-DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
MY+K ++ + F + K D+ W SMI F+K GY EAL F +M +P+
Sbjct: 774 DMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKM-EELQIKPD 832
Query: 238 EFIFGSVFSACSNF-----ARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLF 287
E F V AC++ R F + +P L + I + + EA
Sbjct: 833 EVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAI 892
Query: 288 SEMRDRELLPDGLTVHSLLCAC 309
++ R PDG+ + L AC
Sbjct: 893 DQLPFR---PDGVVWATYLAAC 911
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 68/246 (27%)
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
+PD V+ AC+++ L Q+HC + K+G + VF L+D+Y KCG + +AR+
Sbjct: 155 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 214
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
+F+ + PD + WSS+I Y + GC EAL LF+RM +G +P+ VTLV +++ + G
Sbjct: 215 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGR 274
Query: 518 VEEG-------------------------------LHLYRIMENEYGIIPTRE------- 539
++ L LY+ M + +G+ PTR
Sbjct: 275 LDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRS-WGLWPTRSTFASMLS 333
Query: 540 --------------HCSCV--------------VDLLARAGCVHEAEDFINQMACDADIV 571
H + V ++L A+ GC +A++ + ++C+ +IV
Sbjct: 334 AAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFD-LSCEKNIV 392
Query: 572 VWKSLL 577
+W ++L
Sbjct: 393 MWNAML 398
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 186/587 (31%), Positives = 297/587 (50%), Gaps = 42/587 (7%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
I TY L C+ LR LG++V DHI+ Q ++ N ++ +Y CG++ +AR
Sbjct: 55 IDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQI 114
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FD + + VV+W A+IAG +Q +A L+ QM+ G+ P TF S++ ACS +
Sbjct: 115 FDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGL 174
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+++HA V+ + S AL++MY K + DAR VF G+ +DV+++ M+ +
Sbjct: 175 NWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGY 234
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------------------- 250
+K G +A F M G +PN+ F S+ C
Sbjct: 235 AKSGDWEKAFELFYRMQQVG-LKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDD 293
Query: 251 ------------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
AR +F+ + D+ SW +I G A + N +A LF+ M++
Sbjct: 294 IRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQE 353
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ PD +T ++ AC L ++HS + GF +++ V A++ MYAKC + +
Sbjct: 354 EGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKD 413
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A VF + + D VSW+++I A +++ E F F M S I+PD +T+ +++ AC
Sbjct: 414 ARQVFDAMPRR-DVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACG 472
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+ +L++ +++ K L V + N L+ + K GS+ AR +F+ M DV++W++
Sbjct: 473 HLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNA 532
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
+I GY+ G EAL LF RM PN VT VGVL+ACS G V+EG + +
Sbjct: 533 MIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGR 592
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
GI+PT + C+VDLL RAG + EAE I M +W SLL +
Sbjct: 593 GIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVA 639
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 193/416 (46%), Gaps = 44/416 (10%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
A++ + ++P+ ++ ++ C + +L G+ VH + + D+ + ++
Sbjct: 243 AFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIR 302
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MY CGS+E AR FD M R+VVSWT MI G ++N DA L+ M + G+ P + T
Sbjct: 303 MYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRIT 362
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
+ I+ AC+ ++ R++H+ V + G+ L+ AL+ MY K I DAR VF +
Sbjct: 363 YMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMP 422
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------- 251
R+DV SW +MI A+ + GY EA F+ ++ +P+ + ++ +AC +
Sbjct: 423 RRDVVSWSAMIGAYVENGYGTEAFETFH-LMKRSNIEPDGVTYINLLNACGHLGALDVGM 481
Query: 252 ---------------------------------ARILFNEIDSPDLASWNALIAGVASHS 278
AR +F+ + D+ +WNA+I G + H
Sbjct: 482 EIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHG 541
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVC 337
NA EA+ LF M P+ +T +L AC + +G + +Y+++ G V +
Sbjct: 542 NAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLY 601
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
++ + + L A L+ K + S W+S++ AC H + R R L
Sbjct: 602 GCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCL 657
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 195/588 (33%), Positives = 306/588 (52%), Gaps = 47/588 (7%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
I P T ++ C+ +SL+ G++V + I + D L + + MY CG L++A
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRV 151
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FD++ + W ++ +++ + +I L+ +M+ SGV +TF + K+ S L SV
Sbjct: 152 FDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G QLH +++KS G N+L+A Y K R+ AR VF + +DV SW S+I +
Sbjct: 212 NGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------- 251
G + L F +ML G + + SVF+ C++
Sbjct: 272 VSNGLAEKGLSVFVQMLFSG-IEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSRE 330
Query: 252 -------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
A+++F E+ + S+ ++IAG A A EA+ LF EM +
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK--MGFDSNVPVCNAILTMYAKCSVL 350
+ PD TV ++L C L +G +VH +I + MGFD + V NA++ MYAKC +
Sbjct: 391 EGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFD--IFVSNALMDMYAKCGSM 448
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ-IKPDHITFNDVMG 409
A LVF E+ + D +SWN++I ++ A E LF+ +L + PD T V+
Sbjct: 449 REAELVFSEM-RVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLP 507
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
ACA +++ + ++H YI + G D V N L+D+Y KCG+L AR LF+ + + D+VS
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVS 567
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+ +I GY G G EA+ LF +MR G+ P+ ++ V +L ACSH GLV+EG + IM
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+E I PT EH +C+VD+LAR G + +A FI M D +W +LL
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALL 675
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 212/446 (47%), Gaps = 44/446 (9%)
Query: 29 TNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
+ I I +T + + C+ R + LGR VH + + + N +L+MY KCG L+
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDS 349
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A++ F +M R+VVS+T+MIAG ++ +A+KL+ +M + G+ P +T +++ C+
Sbjct: 350 AKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR 409
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+ G+++H + +++ G + NAL+ MY K + +A VFS + KD+ SW ++
Sbjct: 410 NRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTV 469
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------ 250
I +SK Y EAL FN +L + P+E V AC++
Sbjct: 470 IGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 529
Query: 251 ----------------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
AR+LF++I S DL SW +IAG H EA++LF+
Sbjct: 530 YFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFN 589
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAILTMYAKC 347
+MR + PD ++ SLL AC + +G + + + + + V I+ M A+
Sbjct: 590 QMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLART 649
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
L A + + D+ W +++ C H+ + R+ ++ +++P++ + +
Sbjct: 650 GNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVF--ELEPENTGYYVL 707
Query: 408 MGAC-AKMASLEMVTQLHCYITKTGL 432
M A+ E V +L I + GL
Sbjct: 708 MANIYAEAEKWEEVKRLRKRIGQRGL 733
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 184/587 (31%), Positives = 308/587 (52%), Gaps = 45/587 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
ST+A ++SA +++++ G+++H ++ +V + + ++N+Y KCG DA+ FD
Sbjct: 326 STFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDL 385
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
++N+V W AM+ G QN +AI+++ M++ + +FTF SI+ AC+ L S LG
Sbjct: 386 SCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLG 445
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+Q+H IK+ L NA + MY+K+ I DA+ +FS I KD SW ++ ++
Sbjct: 446 KQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQN 505
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
E EA+C M HG P++ F + +ACSN
Sbjct: 506 LEEEEAVCMLKRMRLHG-ITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAV 564
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+R +F ++D+ + NALIAG ++N +EA+ LF ++ L
Sbjct: 565 GSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGL 624
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG--FDSNVPVCNAILTMYAKCSVLCNA 353
P +T S+L C G L G QVH Y +K G +D + + ++ +Y K +L +A
Sbjct: 625 KPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTL-LGVSLAGIYLKSKMLEDA 683
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
+ E+ + + W +II+ Q+ + F RM ++ D TF V+ AC+
Sbjct: 684 NKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSD 743
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP-DVVSWSS 472
+ + ++H ITK+G + L+D+Y KCG + S+ + F ++N D++ W+S
Sbjct: 744 VTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNS 803
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
+I+G+A+ G DEAL LF +M L + P+ VT +GVL AC+H GL+ EG H + M Y
Sbjct: 804 MIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVY 863
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G+ P +H +C +DLL R G + EA++ I+Q+ D VVW + LA+
Sbjct: 864 GLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAA 910
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/530 (28%), Positives = 268/530 (50%), Gaps = 11/530 (2%)
Query: 49 RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMI 108
R Q R +H IL L + ++ +Y K G + A +R + ++++
Sbjct: 70 RHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLL 129
Query: 109 AGCSQNYQENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
+ +++ D + + + +G P QF ++ ACS +G + GRQ+H V+KS
Sbjct: 130 SCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGF 189
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
S + + AL+ MY K + +AR VF GIA D W SMIA + ++G EAL F+
Sbjct: 190 SSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSR 249
Query: 228 MLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANE 282
M G+ P++ ++ S ++ R+ L ++ +P +WNA+I+G A
Sbjct: 250 MDKMGS-APDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFN 308
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
+ L+ +MR L P T S+L A +G Q+H+ + G D+NV V ++++
Sbjct: 309 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLIN 368
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
+YAKC +A VF +L + V WN+++ +Q+ EE R+F M+ ++ D
Sbjct: 369 LYAKCGCPSDAKNVF-DLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEF 427
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
TF ++GAC ++S + Q+HC K + +FV N +D+Y K G++G A+ LF+ +
Sbjct: 428 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 487
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
D +SW++L +G AQ +EA+ + RMR G++P+ V+ + ACS++ E G
Sbjct: 488 PYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGK 547
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
++ + +YGI S ++DL ++ G V + Q+ DA +V
Sbjct: 548 QIH-CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQV--DASSIV 594
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 152/502 (30%), Positives = 250/502 (49%), Gaps = 39/502 (7%)
Query: 34 RPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP + A ++SACS + L GR+VH ++ S V + +++MY KCG + +AR
Sbjct: 155 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 214
Query: 92 GFDKMPQRNVVSWTAMIA-----GCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
FD + + + W++MIA GC YQE A+ L+ +M + G P Q T +II
Sbjct: 215 VFDGIACPDTICWSSMIACYHRVGC---YQE--ALALFSRMDKMGSAPDQVTLVTII--- 266
Query: 147 SGLGSVCLGRQLHAH-VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
S L S GR HA ++K +A NA+I+ + + + ++ KD+ SW
Sbjct: 267 STLASS--GRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLY-----KDMRSW 319
Query: 206 G---------SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS-----ACSNF 251
G SM++A + + +E + HG N F+ S+ + C +
Sbjct: 320 GLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHG-LDANVFVGSSLINLYAKCGCPSD 378
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
A+ +F+ ++ WNA++ G + EA+ +F M L D T S+L AC
Sbjct: 379 AKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTY 438
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+ Y G QVH IK D ++ V NA L MY+K + +A +F L DS+SWN+
Sbjct: 439 LSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALF-SLIPYKDSISWNA 497
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+ Q+ + EE + RM I PD ++F+ + AC+ + + E Q+HC K G
Sbjct: 498 LTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYG 557
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
+ + V + L+D+Y K G + S+RK+F ++ +V ++LI G+ Q DEA++LF
Sbjct: 558 ICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQ 617
Query: 492 RMRSLGVSPNLVTLVGVLTACS 513
++ G+ P+ VT +L+ CS
Sbjct: 618 QVLKDGLKPSSVTFSSILSGCS 639
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 198/435 (45%), Gaps = 49/435 (11%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QNL E V I +++ I+ACS++R+ + G+++H + +
Sbjct: 504 QNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHA 563
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ + ++++Y K G +E +R F ++ ++V A+IAG QN E++AI+L+ Q+L+ G
Sbjct: 564 VGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDG 623
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE--HGSHLIAQNALIAMYTKFDRILD 189
+ P TF SI+ CSG + +G+Q+H + +KS + L+ +L +Y K + D
Sbjct: 624 LKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGV-SLAGIYLKSKMLED 682
Query: 190 ARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
A + + + K++ W ++I+ +++ GY +L F M H + +E F SV AC
Sbjct: 683 ANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRM-RHCNVRSDEATFASVLKAC 741
Query: 249 SNFARI----------------------------------------LFNEI-DSPDLASW 267
S+ F E+ + D+ W
Sbjct: 742 SDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPW 801
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
N++I G A + A+EA+ LF +M + ++ PD +T +L AC + +G + K
Sbjct: 802 NSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRK 861
Query: 328 M-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+ G + + + + L A +L D V W + +AAC H EE
Sbjct: 862 VYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKD-EERG 920
Query: 387 RLFSRMLASQIKPDH 401
++ +R L +++P +
Sbjct: 921 KIAARKLV-ELEPQY 934
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 155/322 (48%), Gaps = 22/322 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N ++ + N +EA+ + Q ++PS T++ ++S CS + +G++VH +
Sbjct: 597 NALIAGFVQNNNEDEAIQLF---QQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCY 653
Query: 61 ILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDKMP-QRNVVSWTAMIAGCSQNYQEN 118
L S D +L + +Y K LEDA +MP +N+ WTA+I+G +QN +
Sbjct: 654 TLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGD 713
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
++ + +M V + TF S++KACS + + G+++H + KS GS+ A +ALI
Sbjct: 714 HSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALI 773
Query: 179 AMYTKFDRILDARNVFSGIARK-DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
MY+K ++ + F + K D+ W SMI F+K GY EAL F +M +P+
Sbjct: 774 DMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKM-EELQIKPD 832
Query: 238 EFIFGSVFSACSNF-----ARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLF 287
E F V AC++ R F + +P L + I + + EA
Sbjct: 833 EVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAI 892
Query: 288 SEMRDRELLPDGLTVHSLLCAC 309
++ R PDG+ + L AC
Sbjct: 893 DQLPFR---PDGVVWATYLAAC 911
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 68/246 (27%)
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
+PD V+ AC+++ L Q+HC + K+G + VF L+D+Y KCG + +AR+
Sbjct: 155 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 214
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
+F+ + PD + WSS+I Y + GC EAL LF+RM +G +P+ VTLV +++ + G
Sbjct: 215 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGR 274
Query: 518 VEEG-------------------------------LHLYRIMENEYGIIPTRE------- 539
++ L LY+ M + +G+ PTR
Sbjct: 275 LDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRS-WGLWPTRSTFASMLS 333
Query: 540 --------------HCSCV--------------VDLLARAGCVHEAEDFINQMACDADIV 571
H + V ++L A+ GC +A++ + ++C+ +IV
Sbjct: 334 AAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFD-LSCEKNIV 392
Query: 572 VWKSLL 577
+W ++L
Sbjct: 393 MWNAML 398
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 185/614 (30%), Positives = 309/614 (50%), Gaps = 43/614 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+ L + N+++ + QN I T A + ACS +L LG+++H
Sbjct: 185 IQGLVAEGFANDSIYLFQEMQNE-GIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLG 243
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
D+ + + ++++Y KCG +E A F MP++N V+W ++ G +Q +KL+
Sbjct: 244 LLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFC 303
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M++ V +FT +++K C+ ++ G+ +H+ +IK + + L+ MY+K
Sbjct: 304 SMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCG 363
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+DA VF I + D+ W ++I + G E++ F+ ++ G PN++ S+
Sbjct: 364 LAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFH-LMRLGDTLPNQYTICSLL 422
Query: 246 SACSNFARI----------------------------------------LFNEIDSPDLA 265
SA +N + L+ + DL
Sbjct: 423 SAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLI 482
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SWNA ++G+ + +++F M + +P+ T S+L +C ++ G QVH++I
Sbjct: 483 SWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHI 542
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
IK D N VC A++ MYAKC L +A + F L D +W II Q NQ E+
Sbjct: 543 IKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVR-DLFTWTVIITNYAQTNQGEKA 601
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
F +M +KP+ T + C+ +ASLE QLH + K+G D+FV + L+D+
Sbjct: 602 LNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDM 661
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y KCG + A LF + D ++W+++I GYAQ G G++AL F M G+SP+ VT
Sbjct: 662 YAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTF 721
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
G+L+ACSH GLVEEG + M ++GI PT +HC+C+VD+L R G E EDFI +M
Sbjct: 722 TGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQ 781
Query: 566 CDADIVVWKSLLAS 579
+ ++W+++L +
Sbjct: 782 LSQNALIWETVLGA 795
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 168/580 (28%), Positives = 278/580 (47%), Gaps = 44/580 (7%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y+ ++ C+S RSL + + +H I+ PD L ++N+Y KC AR+ KMP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
R+VVSWTA+I G ND+I L+ +M G+MP +FT + +KACS ++ LG+Q
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+HA K L +AL+ +Y K I A +F G+ ++ +W ++ +++ G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------------------- 254
L F M+ + NEF +V C+N +
Sbjct: 295 VTGVLKLFCSMMELDV-KCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGC 353
Query: 255 -----------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
+F I PD+ W+ALI + + E++ LF MR + LP
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLP 413
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+ T+ SLL A L G +H+ + K GF+++V V NA++TMY K + + ++
Sbjct: 414 NQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLY 473
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+ + + D +SWN+ ++ + +F ML P+ TF ++G+C+ + +
Sbjct: 474 ESM-VDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDV 532
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
Q+H +I K L + FV L+D+Y KC L A FN + D+ +W+ +I Y
Sbjct: 533 HYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNY 592
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
AQ G++AL F +M+ GV PN TL G L+ CS + +E G L+ M + G +
Sbjct: 593 AQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHS-MVFKSGHVSD 651
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
S +VD+ A+ GC+ EAE + D + W +++
Sbjct: 652 MFVGSALVDMYAKCGCMEEAEALFEALI-RRDTIAWNTII 690
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 178/338 (52%), Gaps = 5/338 (1%)
Query: 243 SVFSAC--SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
+V++ C S +AR++ ++ D+ SW ALI G+ + AN+++ LF EM++ ++P+
Sbjct: 155 NVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEF 214
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
T+ + L AC + L G Q+H+ K+G ++ V +A++ +YAKC + A +F +
Sbjct: 215 TLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGM 274
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
+ D V+WN ++ Q + +LF M+ +K + T V+ CA +L+
Sbjct: 275 PEQND-VTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQG 333
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
+H I K G + F+ GL+D+Y KCG A +F ++ PD+V WS+LI Q
Sbjct: 334 QVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQ 393
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
G +E++KLF MR PN T+ +L+A ++ G ++ G ++ + +YG
Sbjct: 394 GQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVW-KYGFETDVAV 452
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +V + + GCVH+ M D D++ W + L+
Sbjct: 453 SNALVTMYMKNGCVHDGTKLYESMV-DRDLISWNAYLS 489
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 201/459 (43%), Gaps = 56/459 (12%)
Query: 35 PSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
P+ Y L+SA ++ +LQ G+ +H + + DV + N ++ MY K G + D
Sbjct: 413 PNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKL 472
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
++ M R+++SW A ++G + + ++ ML+ G +P +TF SI+ +CS L V
Sbjct: 473 YESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDV 532
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
GRQ+HAH+IK++ + ALI MY K + DA F+ ++ +D+ +W +I +
Sbjct: 533 HYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNY 592
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------ 254
++ +AL +F +M G +PNEF S CS+ A +
Sbjct: 593 AQTNQGEKALNYFRQMQQEGV-KPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSD 651
Query: 255 ----------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
LF + D +WN +I G A + N+A++ F M D
Sbjct: 652 MFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLD 711
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ PDG+T +L AC + + +G + +S G V C ++ + +
Sbjct: 712 EGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFD 771
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRL-----FSRMLASQIKP 399
+++ + +++ W +++ A HN A +LF L S +L S I
Sbjct: 772 ELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFA 831
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
++DV + M+S + + C + FV
Sbjct: 832 TEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFV 870
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 130/248 (52%), Gaps = 2/248 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N Y+S L +Y+ L + + T+ ++ +CS L + GR+VH HI+
Sbjct: 485 NAYLSGLHDCGMYDRPLTIF-YHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHII 543
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ + + +++MY KC LEDA + F+++ R++ +WT +I +Q Q A+
Sbjct: 544 KNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALN 603
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ QM Q GV P +FT + CS L S+ G+QLH+ V KS H S + +AL+ MY
Sbjct: 604 YFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYA 663
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + +A +F + R+D +W ++I +++ G +AL F ML G P+ F
Sbjct: 664 KCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGI-SPDGVTFT 722
Query: 243 SVFSACSN 250
+ SACS+
Sbjct: 723 GILSACSH 730
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 136/277 (49%), Gaps = 7/277 (2%)
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
S+L C + +L +H I+K + + + +++ +YAKC A LV ++ +
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKM-PD 175
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
D VSW ++I + A + LF M I P+ T + AC+ +L++ Q+
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H K GL D+FV + L+D+Y KCG + A K+F M + V+W+ L+ GYAQ G
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDV 295
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR-IMENEYGIIPTREHCS 542
LKLF M L V N TL VL C++ +++G ++ I++ Y E
Sbjct: 296 TGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGY---EGNEFIG 352
Query: 543 C-VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
C +VD+ ++ G +A + DIVVW +L+
Sbjct: 353 CGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALIT 388
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 185/614 (30%), Positives = 309/614 (50%), Gaps = 43/614 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+ L + N+++ + QN I T A + ACS +L LG+++H
Sbjct: 185 IQGLVAEGFANDSIYLFQEMQNE-GIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLG 243
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
D+ + + ++++Y KCG +E A F MP++N V+W ++ G +Q +KL+
Sbjct: 244 LLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFC 303
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M++ V +FT +++K C+ ++ G+ +H+ +IK + + L+ MY+K
Sbjct: 304 SMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCG 363
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+DA VF I + D+ W ++I + G E++ F+ ++ G PN++ S+
Sbjct: 364 LAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFH-LMRLGDTLPNQYTICSLL 422
Query: 246 SACSNFARI----------------------------------------LFNEIDSPDLA 265
SA +N + L+ + DL
Sbjct: 423 SAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLI 482
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SWNA ++G+ + +++F M + +P+ T S+L +C ++ G QVH++I
Sbjct: 483 SWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHI 542
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
IK D N VC A++ MYAKC L +A + F L D +W II Q NQ E+
Sbjct: 543 IKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVR-DLFTWTVIITNYAQTNQGEKA 601
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
F +M +KP+ T + C+ +ASLE QLH + K+G D+FV + L+D+
Sbjct: 602 LNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDM 661
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y KCG + A LF + D ++W+++I GYAQ G G++AL F M G+SP+ VT
Sbjct: 662 YAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTF 721
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
G+L+ACSH GLVEEG + M ++GI PT +HC+C+VD+L R G E EDFI +M
Sbjct: 722 TGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQ 781
Query: 566 CDADIVVWKSLLAS 579
+ ++W+++L +
Sbjct: 782 LSQNALIWETVLGA 795
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 168/580 (28%), Positives = 278/580 (47%), Gaps = 44/580 (7%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y+ ++ C+S RSL + + +H I+ PD L ++N+Y KC AR+ KMP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
R+VVSWTA+I G ND+I L+ +M G+MP +FT + +KACS ++ LG+Q
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+HA K L +AL+ +Y K I A +F G+ ++ +W ++ +++ G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------------------- 254
L F M+ + NEF +V C+N +
Sbjct: 295 VTGVLKLFCSMMELDV-KCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGC 353
Query: 255 -----------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
+F I PD+ W+ALI + + E++ LF MR + LP
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLP 413
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+ T+ SLL A L G +H+ + K GF+++V V NA++TMY K + + ++
Sbjct: 414 NQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLY 473
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+ + + D +SWN+ ++ + +F ML P+ TF ++G+C+ + +
Sbjct: 474 ESM-VDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDV 532
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
Q+H +I K L + FV L+D+Y KC L A FN + D+ +W+ +I Y
Sbjct: 533 HYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNY 592
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
AQ G++AL F +M+ GV PN TL G L+ CS + +E G L+ M + G +
Sbjct: 593 AQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHS-MVFKSGHVSD 651
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
S +VD+ A+ GC+ EAE + D + W +++
Sbjct: 652 MFVGSALVDMYAKCGCMEEAEALFEALI-RRDTIAWNTII 690
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 178/338 (52%), Gaps = 5/338 (1%)
Query: 243 SVFSAC--SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
+V++ C S +AR++ ++ D+ SW ALI G+ + AN+++ LF EM++ ++P+
Sbjct: 155 NVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEF 214
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
T+ + L AC + L G Q+H+ K+G ++ V +A++ +YAKC + A +F +
Sbjct: 215 TLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGM 274
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
+ D V+WN ++ Q + +LF M+ +K + T V+ CA +L+
Sbjct: 275 PEQND-VTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQG 333
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
+H I K G + F+ GL+D+Y KCG A +F ++ PD+V WS+LI Q
Sbjct: 334 QVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQ 393
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
G +E++KLF MR PN T+ +L+A ++ G ++ G ++ + +YG
Sbjct: 394 GQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVW-KYGFETDVAV 452
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +V + + GCVH+ M D D++ W + L+
Sbjct: 453 SNALVTMYMKNGCVHDGTKLYESMV-DRDLISWNAYLS 489
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 201/459 (43%), Gaps = 56/459 (12%)
Query: 35 PSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
P+ Y L+SA ++ +LQ G+ +H + + DV + N ++ MY K G + D
Sbjct: 413 PNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKL 472
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
++ M R+++SW A ++G + + ++ ML+ G +P +TF SI+ +CS L V
Sbjct: 473 YESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDV 532
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
GRQ+HAH+IK++ + ALI MY K + DA F+ ++ +D+ +W +I +
Sbjct: 533 HYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNY 592
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------ 254
++ +AL +F +M G +PNEF S CS+ A +
Sbjct: 593 AQTNQGEKALNYFRQMQQEGV-KPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSD 651
Query: 255 ----------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
LF + D +WN +I G A + N+A++ F M D
Sbjct: 652 MFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLD 711
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ PDG+T +L AC + + +G + +S G V C ++ + +
Sbjct: 712 EGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFD 771
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRL-----FSRMLASQIKP 399
+++ + +++ W +++ A HN A +LF L S +L S I
Sbjct: 772 ELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFA 831
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
++DV + M+S + + C + FV
Sbjct: 832 TEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFV 870
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 130/248 (52%), Gaps = 2/248 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N Y+S L +Y+ L + + T+ ++ +CS L + GR+VH HI+
Sbjct: 485 NAYLSGLHDCGMYDRPLTIF-YHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHII 543
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ + + +++MY KC LEDA + F+++ R++ +WT +I +Q Q A+
Sbjct: 544 KNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALN 603
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ QM Q GV P +FT + CS L S+ G+QLH+ V KS H S + +AL+ MY
Sbjct: 604 YFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYA 663
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + +A +F + R+D +W ++I +++ G +AL F ML G P+ F
Sbjct: 664 KCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGI-SPDGVTFT 722
Query: 243 SVFSACSN 250
+ SACS+
Sbjct: 723 GILSACSH 730
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 136/277 (49%), Gaps = 7/277 (2%)
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
S+L C + +L +H I+K + + + +++ +YAKC A LV ++ +
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKM-PD 175
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
D VSW ++I + A + LF M I P+ T + AC+ +L++ Q+
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H K GL D+FV + L+D+Y KCG + A K+F M + V+W+ L+ GYAQ G
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDV 295
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR-IMENEYGIIPTREHCS 542
LKLF M L V N TL VL C++ +++G ++ I++ Y E
Sbjct: 296 TGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGY---EGNEFIG 352
Query: 543 C-VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
C +VD+ ++ G +A + DIVVW +L+
Sbjct: 353 CGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALIT 388
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 191/566 (33%), Positives = 289/566 (51%), Gaps = 42/566 (7%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ 113
G+ +H HIL D+ QN +LN Y + SL+DA FD+MPQ N +S+ + G S+
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 114 NYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA 173
++Q + A+ +++ + G F F +++K + L LHA V K H +
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFV 173
Query: 174 QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA 233
ALI Y+ + AR+VF I KD+ SW M+A +++ + E+L FN+M G
Sbjct: 174 GTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMG- 232
Query: 234 YQPNEFIFGSVFSACSNF----------------------------------------AR 253
Y+PN F +C A+
Sbjct: 233 YKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQ 292
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
LF E+ DL W+ +IA A + EA+ LF MR ++P+ T S+L AC +
Sbjct: 293 RLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSV 352
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
+L G Q+HS ++K G +SNV V NAI+ +YAKC + N++ +F+EL D V+WN+II
Sbjct: 353 SLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRND-VTWNTII 411
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
+Q E LF+ ML ++P +T++ V+ A A +A+LE Q+H KT
Sbjct: 412 VGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYN 471
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
D V N L+D+Y KCG + AR F+ M D VSW+++I GY+ G EAL LF M
Sbjct: 472 KDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMM 531
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
+ PN +T VGVL+ACS+ GL+ +G + M +Y I P EH +C+V LL R G
Sbjct: 532 QHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGR 591
Query: 554 VHEAEDFINQMACDADIVVWKSLLAS 579
EA I ++A ++VW++LL +
Sbjct: 592 FDEAMKLIGEIAYQPSVMVWRALLGA 617
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 193/421 (45%), Gaps = 42/421 (9%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+ P + L+ S+ L +H + D + +++ Y G+++ AR
Sbjct: 133 EVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARH 192
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD + +++VSWT M+A ++N ++++L+ QM G P FT +K+C GL +
Sbjct: 193 VFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEA 252
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+G+ +H +K + L AL+ +Y K I+DA+ +F + + D+ W MIA
Sbjct: 253 FNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIAR 312
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------------- 254
+++ EAL F M + PN F F SV AC++ +
Sbjct: 313 YAQSDRSKEALDLFLRM-RQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNS 371
Query: 255 -----------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
LF E+ + +WN +I G + AM+LF+ M
Sbjct: 372 NVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHML 431
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ ++ P +T S+L A L G+Q+HS IK ++ + V N+++ MYAKC +
Sbjct: 432 EHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRIN 491
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A L F ++ K D VSWN++I H + E LF M + KP+ +TF V+ AC
Sbjct: 492 DARLTFDKMNKR-DEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSAC 550
Query: 412 A 412
+
Sbjct: 551 S 551
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 189/391 (48%), Gaps = 48/391 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T +G + +C L + +G+ VH L D+ + +L +Y K G + DA+ F++M
Sbjct: 239 TISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEM 298
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+ +++ W+ MIA +Q+ + +A+ L+++M Q+ V+P FTF S+++AC+ S+ LG+
Sbjct: 299 PKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGK 358
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H+ V+K S++ NA++ +Y K I ++ +F + ++ +W ++I + +LG
Sbjct: 359 QIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLG 418
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------------- 249
A+ F ML H QP E + SV A +
Sbjct: 419 DGERAMNLFTHMLEHDM-QPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVA 477
Query: 250 -------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
N AR+ F++++ D SWNA+I G + H + EA++LF M+ +
Sbjct: 478 NSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCK 537
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC----NAILTMYAKCSVLCN 352
P+ LT +L AC LY+G ++ M D ++ C ++ + +
Sbjct: 538 PNKLTFVGVLSACSNAGLLYKG---QAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDE 594
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
A+ + E+ + W +++ AC+ H + +
Sbjct: 595 AMKLIGEIAYQPSVMVWRALLGACVIHKKVD 625
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 171/338 (50%), Gaps = 17/338 (5%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+A ++ AC+S SL LG+++H +L +V + N I+++Y KCG +E++ F+++
Sbjct: 340 TFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEEL 399
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P RN V+W +I G Q A+ L+ ML+ + P + T+ S+++A + L ++ G
Sbjct: 400 PDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGL 459
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H+ IK+ + + N+LI MY K RI DAR F + ++D SW +MI +S G
Sbjct: 460 QIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHG 519
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARILFNEIDSPDLAS 266
+EAL F +M+ H +PN+ F V SACSN F + + P +
Sbjct: 520 MSMEALNLF-DMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEH 578
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
+ ++ + +EAM L E+ + P + +LL AC+ + G +++
Sbjct: 579 YTCMVWLLGRLGRFDEAMKLIGEIAYQ---PSVMVWRALLGACVIHKKVDLGRVCAQHVL 635
Query: 327 KMGFDSNVPVCNAILT-MYAKCSVLCNALLVFKELGKN 363
+M + + + +L+ MYA N V K + K
Sbjct: 636 EM--EPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKK 671
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 195/583 (33%), Positives = 293/583 (50%), Gaps = 71/583 (12%)
Query: 34 RP--STYAGLISACSSLRSLQLGRKVHDHILLS-KCQPDVVLQNHILNMYGKCGSLEDAR 90
RP S YA L+SA + G +H IL + P L NH+L YGK G AR
Sbjct: 3 RPLSSQYAALLSAAARTEPHVAG-ALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARAR 61
Query: 91 MGFDKMP-------------------------------QRNVVSWTAMIAGCSQNYQEND 119
FD MP QR++VS+ A+IAG S
Sbjct: 62 RVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQ 121
Query: 120 AIKLYIQMLQ--SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
A+++Y+ +LQ S V P + T +++ A S LG LG+Q H +++ G++ + L
Sbjct: 122 AVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPL 181
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
+ MY K + DA+ F + K+V + +MI + C E
Sbjct: 182 VDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLR--------CKMVEE--------- 224
Query: 238 EFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
AR LF + D +W ++ G + +EA+ +F MR + +
Sbjct: 225 --------------ARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAI 270
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D T S+L AC L QG Q+H+YII+ +D NV V +A++ MY+KC + A VF
Sbjct: 271 DQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVF 330
Query: 358 KELG-KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
+ + KN +SW ++I Q+ +EE R+FS M I PD T V+ +CA +AS
Sbjct: 331 RRMTCKNI--ISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLAS 388
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
LE Q HC +GL + V N L+ +Y KCGS+ A +LF+ M D VSW++L+ G
Sbjct: 389 LEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSG 448
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
YAQFG E + LF +M + GV P+ VT +GVL+ACS G VE+G + M+ ++GI+P
Sbjct: 449 YAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVP 508
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H +C++DL +R+G + EAE+FI QM D + W +LL++
Sbjct: 509 IDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSA 551
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 201/426 (47%), Gaps = 79/426 (18%)
Query: 26 QNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGK--- 82
Q ++++R T + ++ A S+L LG++ H IL + + + +++MY K
Sbjct: 131 QADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSL 190
Query: 83 ----------------------------CGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
C +E+AR F+ M R+ ++WT M+ G +QN
Sbjct: 191 VGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQN 250
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
E++A++++ +M G+ Q+TFGSI+ AC L ++ G+Q+HA++I++ + ++
Sbjct: 251 GLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVG 310
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
+AL+ MY+K I A VF + K++ SW ++I + + G EA+ F+EM G
Sbjct: 311 SALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG-I 369
Query: 235 QPNEFIFGSVFSACSNFARI---------------------------------------- 254
P+++ GSV S+C+N A +
Sbjct: 370 DPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHR 429
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
LF+E+ D SW AL++G A A E + LF +M + + PDG+T +L AC
Sbjct: 430 LFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGF 489
Query: 315 LYQGMQVHSYIIKMGFDSN-VPVCN---AILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
+ +G SY M D VP+ + ++ +Y++ L A K++ + D++ W
Sbjct: 490 VEKG---RSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWG 546
Query: 371 SIIAAC 376
++++AC
Sbjct: 547 TLLSAC 552
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 158/314 (50%), Gaps = 15/314 (4%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
V+ + L +EAL + I I T+ +++AC +L +L+ G+++H +I+ ++
Sbjct: 244 VTGFTQNGLESEALEIFR-RMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTR 302
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+V + + +++MY KC S++ A F +M +N++SWTA+I G QN +A++++
Sbjct: 303 YDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFS 362
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + G+ P +T GS+I +C+ L S+ G Q H + S ++ NAL+ +Y K
Sbjct: 363 EMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCG 422
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I DA +F ++ D SW ++++ +++ G E + F +ML G +P+ F V
Sbjct: 423 SIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGV-KPDGVTFIGVL 481
Query: 246 SACSNF-----ARILFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
SACS R F+ + P + +I + EA +M +
Sbjct: 482 SACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQM---PM 538
Query: 296 LPDGLTVHSLLCAC 309
PD + +LL AC
Sbjct: 539 HPDAIGWGTLLSAC 552
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 127/268 (47%), Gaps = 34/268 (12%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I P Y +IS+C++L SL+ G + H L+S + + N ++ +YGKCGS+EDA
Sbjct: 369 IDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAH 428
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+M + VSWTA+++G +Q + + I L+ +ML GV P TF ++ ACS G
Sbjct: 429 RLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAG 488
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILDARNVFSGIA-RKDVTSWGS 207
V GR + H ++ +HG I + +I +Y++ ++ +A + D WG+
Sbjct: 489 FVEKGRS-YFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGT 547
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASW 267
+++A C + G + + EID + AS+
Sbjct: 548 LLSA-----------CRLRGDMEIGKWAAENLL-----------------EIDPQNPASY 579
Query: 268 NALIAGVASHSNANEAMSLFSEMRDREL 295
L + A+ NE L MRDR++
Sbjct: 580 VLLCSMHAAKGQWNEVAQLRRGMRDRQV 607
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 182/614 (29%), Positives = 324/614 (52%), Gaps = 43/614 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S L + L EA++ + + + I P + ++SA + ++ +LG ++H ++
Sbjct: 233 ISGLSQNGLEEEAILLF-CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG 291
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ + N ++ +Y + L A F M R+ VS+ ++I+G Q + A++L+
Sbjct: 292 FHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFT 351
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + + P T S++ AC+ +G++ G QLH+H IK+ + +I + +L+ +Y+K
Sbjct: 352 KMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCA 411
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A F +++ W M+ A+ +L ++ F +M G PN+F + S+
Sbjct: 412 DVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI-PNQFTYPSIL 470
Query: 246 SACSNFARILFNE----------------------------------------IDSPDLA 265
C++ + E + D+
Sbjct: 471 RTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVV 530
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW A+IAG H +EA+ LF EM R + D + S + AC G L QG Q+H+
Sbjct: 531 SWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQS 590
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
GF +++ + NA++++YA+C + A L F+++G + +++SWNS+++ Q EE
Sbjct: 591 YAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG-DKNNISWNSLVSGLAQSGYFEEA 649
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
++F RML ++ + + T+ + A A +A+++ Q+H + KTG + V N L+ +
Sbjct: 650 LQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISL 709
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y K GS+ A + FN M +V+SW+++I GY+Q GCG EAL+LF M+ G+ PN VT
Sbjct: 710 YAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTF 769
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
VGVL+ACSH+GLV+EGL + M + ++P EH CVVDLL RAG + A ++I +M
Sbjct: 770 VGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMP 829
Query: 566 CDADIVVWKSLLAS 579
AD ++W++LL++
Sbjct: 830 IPADAMIWRTLLSA 843
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 155/583 (26%), Positives = 284/583 (48%), Gaps = 45/583 (7%)
Query: 37 TYAGLISACSSLR-SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
T+AG++ AC + ++VH ++ N ++++Y K G +E A+ F+
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ +++V+W AMI+G SQN E +AI L+ M S + P + S++ A + + LG
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
QLH VIK S N L+A+Y++ +++ A +FS + +D S+ S+I+ +
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G+ AL F +M +P+ S+ SAC++
Sbjct: 341 GFSDRALELFTKM-QRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIIL 399
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A F ++ ++ WN ++ N +++ +F +M+ +
Sbjct: 400 EGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGM 459
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
+P+ T S+L C LY G Q+H+++IK GF NV VC+ ++ MYAK L AL
Sbjct: 460 IPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALR 519
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+ + L ++ D VSW ++IA +QH+ E +LF M I+ D+I F + ACA +
Sbjct: 520 ILRRLPED-DVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIR 578
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+L Q+H G D+ + N L+ +Y +CG + A F + + + +SW+SL+
Sbjct: 579 ALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVS 638
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
G AQ G +EAL++F RM N+ T ++A + + +++G ++ M + G
Sbjct: 639 GLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHS-MVLKTGYD 697
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
RE + ++ L A++G + +A N M+ + +++ W +++
Sbjct: 698 SEREVSNSLISLYAKSGSISDAWREFNDMS-ERNVISWNAMIT 739
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 158/590 (26%), Positives = 278/590 (47%), Gaps = 47/590 (7%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+R Y L+ C + SL ++H I S + +L + +++ Y + G A
Sbjct: 54 VRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAV 113
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+ R+V SW MI L+ +ML G+ P +TF ++KAC G G
Sbjct: 114 KVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVG-G 172
Query: 151 SVCLG--RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+ +Q+H+ S + N LI +Y+K I A+ VF+ I KD+ +W +M
Sbjct: 173 DIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAM 232
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------- 251
I+ S+ G E EA+ F +M H P ++ SV SA +
Sbjct: 233 ISGLSQNGLEEEAILLFCDM-HASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG 291
Query: 252 -----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
A +F+ ++S D S+N+LI+G+ ++ A+ LF+
Sbjct: 292 FHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFT 351
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+M+ L PD +TV SLL AC L++GMQ+HS+ IK G +++ + ++L +Y+KC+
Sbjct: 352 KMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCA 411
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ A F + + V WN ++ A Q + + F +F +M + P+ T+ ++
Sbjct: 412 DVETAHKFFLXT-ETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSIL 470
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
C + +L + Q+H ++ KTG +V+V + L+D+Y K G L A ++ + DVV
Sbjct: 471 RTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVV 530
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
SW+++I GY Q EAL+LF M G+ + + ++AC+ + + +G ++
Sbjct: 531 SWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIH-AQ 589
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G + ++ L AR G + EA ++ D + + W SL++
Sbjct: 590 SYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG-DKNNISWNSLVS 638
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 250/522 (47%), Gaps = 61/522 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N +S L +Q + AL + Q + ++P T A L+SAC+S+ +L G ++H H
Sbjct: 331 NSLISGLVQQGFSDRALELFTKMQRDC---LKPDCITVASLLSACASVGALHKGMQLHSH 387
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ + D++L+ +L++Y KC +E A F N+V W M+ Q +D+
Sbjct: 388 AIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDS 447
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+++ QM G++P QFT+ SI++ C+ LG++ LG Q+H HVIK+ ++ + LI M
Sbjct: 448 FEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDM 507
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K+ ++ A + + DV SW +MIA + + EAL F EM + G Q +
Sbjct: 508 YAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGI-QFDNIG 566
Query: 241 FGSVFSACSN--------------------------------FAR--------ILFNEID 260
F S SAC+ +AR + F +I
Sbjct: 567 FASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG 626
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ SWN+L++G+A EA+ +F M E + T S + A + QG Q
Sbjct: 627 DKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQ 686
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+HS ++K G+DS V N+++++YAK + +A F ++ + + +SWN++I QH
Sbjct: 687 IHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSER-NVISWNAMITGYSQHG 745
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA-------SLEMVTQLHCYITKTGLA 433
E RLF M I P+H+TF V+ AC+ + E + ++H + K+
Sbjct: 746 CGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKS--- 802
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENP-DVVSWSSLI 474
+ +V ++D+ + G L A + M P D + W +L+
Sbjct: 803 -EHYVC--VVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLL 841
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 234/502 (46%), Gaps = 51/502 (10%)
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
I+L M + GV + +++ C GS+ +LH + KS + ++L+
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y + A VF + + V SW MI F + C F ML G PN +
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGI-TPNGYT 161
Query: 241 FGSVFSACS------NF-----------------------------------ARILFNEI 259
F V AC N+ A+ +FN I
Sbjct: 162 FAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCI 221
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-G 318
D+ +W A+I+G++ + EA+ LF +M E+ P + S+L A ++ L++ G
Sbjct: 222 CMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSAST-KIQLFELG 280
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
Q+H +IK GF S VCN ++ +Y++ L +A +F + + D VS+NS+I+ +Q
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTM-NSRDGVSYNSLISGLVQ 339
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
++ LF++M +KPD IT ++ ACA + +L QLH + K G++ D+ +
Sbjct: 340 QGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIIL 399
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
L+D+Y KC + +A K F E ++V W+ +++ Y Q ++ ++F +M+ G+
Sbjct: 400 EGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGM 459
Query: 499 SPNLVTLVGVLTACSHVG--LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
PN T +L C+ +G + E +H + I + G CS ++D+ A+ G +
Sbjct: 460 IPNQFTYPSILRTCTSLGALYLGEQIHTHVI---KTGFQLNVYVCSVLIDMYAKYGQLAL 516
Query: 557 AEDFINQMACDADIVVWKSLLA 578
A + ++ D D+V W +++A
Sbjct: 517 ALRILRRLPED-DVVSWTAMIA 537
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 196/394 (49%), Gaps = 54/394 (13%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY ++ C+SL +L LG ++H H++ + Q +V + + +++MY K G L A ++
Sbjct: 465 TYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRL 524
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+ +VVSWTAMIAG Q+ ++A++L+ +M G+ F S I AC+G+ ++ G+
Sbjct: 525 PEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQ 584
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+HA + G+ L NALI++Y + RI +A F I K+ SW S+++ ++ G
Sbjct: 585 QIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSG 644
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFG---------------------------------- 242
Y EAL F ML A + N F +G
Sbjct: 645 YFEEALQVFVRMLRTEA-EVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVS 703
Query: 243 ----SVFSACSNFARIL--FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
S+++ + + FN++ ++ SWNA+I G + H EA+ LF EM+ ++
Sbjct: 704 NSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIM 763
Query: 297 PDGLTVHSLLCAC--IG----RLTLYQGM-QVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
P+ +T +L AC IG L ++ M ++H + K S VC ++ + +
Sbjct: 764 PNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPK----SEHYVC--VVDLLGRAGQ 817
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A+ KE+ AD++ W ++++AC+ H E
Sbjct: 818 LDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIE 851
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 168/326 (51%), Gaps = 4/326 (1%)
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG-RL 313
+F+E + + SWN +I + + + LF M + P+G T +L AC+G +
Sbjct: 115 VFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDI 174
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
QVHS GFDS+ V N ++ +Y+K + +A VF + D V+W ++I
Sbjct: 175 AFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMK-DIVTWVAMI 233
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
+ Q+ EE LF M AS+I P + V+ A K+ E+ QLHC + K G
Sbjct: 234 SGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFH 293
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
+ +V NGL+ +Y + L SA ++F+ M + D VS++SLI G Q G D AL+LFT+M
Sbjct: 294 SETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKM 353
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
+ + P+ +T+ +L+AC+ VG + +G+ L+ + G+ ++DL ++
Sbjct: 354 QRDCLKPDCITVASLLSACASVGALHKGMQLHS-HAIKAGMSADIILEGSLLDLYSKCAD 412
Query: 554 VHEAEDFINQMACDADIVVWKSLLAS 579
V A F + +IV+W +L +
Sbjct: 413 VETAHKFFLXTETE-NIVLWNVMLVA 437
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 168/315 (53%), Gaps = 15/315 (4%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
++ + ++++EAL ++ I+ +A ISAC+ +R+L+ G+++H +
Sbjct: 536 IAGYVQHDMFSEALQLFE-EMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAG 594
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
D+ + N ++++Y +CG +++A + F+K+ +N +SW ++++G +Q+ +A+++++
Sbjct: 595 FGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFV 654
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+ML++ FT+GS I A + L ++ G+Q+H+ V+K+ + S N+LI++Y K
Sbjct: 655 RMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSG 714
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I DA F+ ++ ++V SW +MI +S+ G +EAL F EM G PN F V
Sbjct: 715 SISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGI-MPNHVTFVGVL 773
Query: 246 SACSNFARI---------LFNEID-SPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
SACS+ + +F D P + ++ + + AM EM +
Sbjct: 774 SACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEM---PI 830
Query: 296 LPDGLTVHSLLCACI 310
D + +LL AC+
Sbjct: 831 PADAMIWRTLLSACV 845
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 184/587 (31%), Positives = 308/587 (52%), Gaps = 45/587 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
ST+A ++SA +++++ G+++H ++ +V + + ++N+Y KCG DA+ FD
Sbjct: 336 STFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDL 395
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
++N+V W AM+ G QN +AI+++ M++ + +FTF SI+ AC+ L S LG
Sbjct: 396 SCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLG 455
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+Q+H IK+ L NA + MY+K+ I DA+ +FS I KD SW ++ ++
Sbjct: 456 KQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQN 515
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
E EA+C M HG P++ F + +ACSN
Sbjct: 516 LEEEEAVCMLKRMRLHG-ITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAV 574
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+R +F ++D+ + NALIAG ++N +EA+ LF ++ L
Sbjct: 575 GSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGL 634
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG--FDSNVPVCNAILTMYAKCSVLCNA 353
P +T S+L C G L G QVH Y +K G +D + + ++ +Y K +L +A
Sbjct: 635 KPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTL-LGVSLAGIYLKSKMLEDA 693
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
+ E+ + + W +II+ Q+ + F RM ++ D TF V+ AC+
Sbjct: 694 NKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSD 753
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP-DVVSWSS 472
+ + ++H ITK+G + L+D+Y KCG + S+ + F ++N D++ W+S
Sbjct: 754 VTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNS 813
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
+I+G+A+ G DEAL LF +M L + P+ VT +GVL AC+H GL+ EG H + M Y
Sbjct: 814 MIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVY 873
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G+ P +H +C +DLL R G + EA++ I+Q+ D VVW + LA+
Sbjct: 874 GLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAA 920
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 153/530 (28%), Positives = 268/530 (50%), Gaps = 11/530 (2%)
Query: 49 RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMI 108
R Q R +H IL L + ++ +Y K G + A +R + ++++
Sbjct: 80 RHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLL 139
Query: 109 AGCSQNYQENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
+ +++ D + + + +G P QF ++ ACS +G + GRQ+H V+KS
Sbjct: 140 SCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGF 199
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
S + + AL+ MY K + +AR VF GIA D W SMIA + ++G EAL F+
Sbjct: 200 SSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSR 259
Query: 228 MLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANE 282
M G+ P++ ++ S ++ R+ L ++ +P +WNA+I+G A
Sbjct: 260 MDKMGS-APDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFN 318
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
+ L+ +MR L P T S+L A +G Q+H+ + G D+NV V ++++
Sbjct: 319 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLIN 378
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
+YAKC +A VF +L + V WN+++ +Q+ EE R+F M+ ++ D
Sbjct: 379 LYAKCGCPSDAKNVF-DLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEF 437
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
TF ++GAC ++S + Q+HC K + +FV N +D+Y K G++G A+ LF+ +
Sbjct: 438 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 497
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
D +SW++L +G AQ +EA+ + RMR G++P+ V+ + ACS++ E G
Sbjct: 498 PYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGK 557
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
++ + +YGI S ++DL ++ G V + Q+ DA +V
Sbjct: 558 QIH-CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQV--DASSIV 604
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 152/502 (30%), Positives = 250/502 (49%), Gaps = 39/502 (7%)
Query: 34 RPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP + A ++SACS + L GR+VH ++ S V + +++MY KCG + +AR
Sbjct: 165 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 224
Query: 92 GFDKMPQRNVVSWTAMIA-----GCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
FD + + + W++MIA GC YQE A+ L+ +M + G P Q T +II
Sbjct: 225 VFDGIACPDTICWSSMIACYHRVGC---YQE--ALALFSRMDKMGSAPDQVTLVTII--- 276
Query: 147 SGLGSVCLGRQLHAH-VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
S L S GR HA ++K +A NA+I+ + + + ++ KD+ SW
Sbjct: 277 STLASS--GRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLY-----KDMRSW 329
Query: 206 G---------SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS-----ACSNF 251
G SM++A + + +E + HG N F+ S+ + C +
Sbjct: 330 GLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHG-LDANVFVGSSLINLYAKCGCPSD 388
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
A+ +F+ ++ WNA++ G + EA+ +F M L D T S+L AC
Sbjct: 389 AKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTY 448
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+ Y G QVH IK D ++ V NA L MY+K + +A +F L DS+SWN+
Sbjct: 449 LSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALF-SLIPYKDSISWNA 507
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+ Q+ + EE + RM I PD ++F+ + AC+ + + E Q+HC K G
Sbjct: 508 LTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYG 567
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
+ + V + L+D+Y K G + S+RK+F ++ +V ++LI G+ Q DEA++LF
Sbjct: 568 ICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQ 627
Query: 492 RMRSLGVSPNLVTLVGVLTACS 513
++ G+ P+ VT +L+ CS
Sbjct: 628 QVLKDGLKPSSVTFSSILSGCS 649
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 198/435 (45%), Gaps = 49/435 (11%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QNL E V I +++ I+ACS++R+ + G+++H + +
Sbjct: 514 QNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHA 573
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ + ++++Y K G +E +R F ++ ++V A+IAG QN E++AI+L+ Q+L+ G
Sbjct: 574 VGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDG 633
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE--HGSHLIAQNALIAMYTKFDRILD 189
+ P TF SI+ CSG + +G+Q+H + +KS + L+ +L +Y K + D
Sbjct: 634 LKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGV-SLAGIYLKSKMLED 692
Query: 190 ARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
A + + + K++ W ++I+ +++ GY +L F M H + +E F SV AC
Sbjct: 693 ANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRM-RHCNVRSDEATFASVLKAC 751
Query: 249 SNFARI----------------------------------------LFNEI-DSPDLASW 267
S+ F E+ + D+ W
Sbjct: 752 SDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPW 811
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
N++I G A + A+EA+ LF +M + ++ PD +T +L AC + +G + K
Sbjct: 812 NSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRK 871
Query: 328 M-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+ G + + + + L A +L D V W + +AAC H EE
Sbjct: 872 VYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKD-EERG 930
Query: 387 RLFSRMLASQIKPDH 401
++ +R L +++P +
Sbjct: 931 KIAARKLV-ELEPQY 944
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 155/322 (48%), Gaps = 22/322 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N ++ + N +EA+ + Q ++PS T++ ++S CS + +G++VH +
Sbjct: 607 NALIAGFVQNNNEDEAIQLF---QQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCY 663
Query: 61 ILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDKMP-QRNVVSWTAMIAGCSQNYQEN 118
L S D +L + +Y K LEDA +MP +N+ WTA+I+G +QN +
Sbjct: 664 TLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGD 723
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
++ + +M V + TF S++KACS + + G+++H + KS GS+ A +ALI
Sbjct: 724 HSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALI 783
Query: 179 AMYTKFDRILDARNVFSGIARK-DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
MY+K ++ + F + K D+ W SMI F+K GY EAL F +M +P+
Sbjct: 784 DMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKM-EELQIKPD 842
Query: 238 EFIFGSVFSACSNF-----ARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLF 287
E F V AC++ R F + +P L + I + + EA
Sbjct: 843 EVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAI 902
Query: 288 SEMRDRELLPDGLTVHSLLCAC 309
++ R PDG+ + L AC
Sbjct: 903 DQLPFR---PDGVVWATYLAAC 921
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 68/246 (27%)
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
+PD V+ AC+++ L Q+HC + K+G + VF L+D+Y KCG + +AR+
Sbjct: 165 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 224
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
+F+ + PD + WSS+I Y + GC EAL LF+RM +G +P+ VTLV +++ + G
Sbjct: 225 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGR 284
Query: 518 VEEG-------------------------------LHLYRIMENEYGIIPTRE------- 539
++ L LY+ M + +G+ PTR
Sbjct: 285 LDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRS-WGLWPTRSTFASMLS 343
Query: 540 --------------HCSCV--------------VDLLARAGCVHEAEDFINQMACDADIV 571
H + V ++L A+ GC +A++ + ++C+ +IV
Sbjct: 344 AAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFD-LSCEKNIV 402
Query: 572 VWKSLL 577
+W ++L
Sbjct: 403 MWNAML 408
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 198/621 (31%), Positives = 312/621 (50%), Gaps = 52/621 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDF--SQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDH 60
N +S+ K L+N AL Y + +I TY ++ +CS++ SL+ R++H
Sbjct: 113 NQMLSAYGKNGLWNRALELYHRMCEEGPEPDKI---TYFIVLGSCSAVGSLREAREIHAS 169
Query: 61 ILLSK--CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
I+ + + ++ LQN ++NMYGKCGS+E+AR FD + R+ VSWT+MI+ + N +
Sbjct: 170 IIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCD 229
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
+A+ LY QM G+ P TF S + AC+ L G+ +HA ++ S S + +ALI
Sbjct: 230 EALDLYQQMDADGIQPDSITFTSALLACTKLVD---GKAIHARIVSSNMESDFVG-SALI 285
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG------ 232
MY + + AR F I K V W S++ A+ + + EAL + M H G
Sbjct: 286 NMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGV 345
Query: 233 -------------AYQPNEFIFGSVF-----------------SACSNF--ARILFNEI- 259
A + + I VF + C AR +FN +
Sbjct: 346 TYVTALGACASLGALKEGKAIHSRVFECGFQSLVVHTALLTMYAKCGELDAARAVFNRVR 405
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
++ W A+I+ A + EA+ L+ +M P+ T ++L AC L GM
Sbjct: 406 QKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGM 465
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
++H ++ SNV V NA++TMYAKC L A F+ G+ D VSWN++I A QH
Sbjct: 466 KIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRK-DLVSWNAMIGAYAQH 524
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFV 438
E L+ M + + PD +T + ACA SL++ ++H + K + V
Sbjct: 525 GLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMV 584
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
L+++Y +CG L +AR +F M DV+SW+++ YAQ G D+ L L+ M G+
Sbjct: 585 QTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGI 644
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAE 558
PN +T +L CSH GL+ G+ + M++E+ ++P REH C+VDLL R+G + +AE
Sbjct: 645 RPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAE 704
Query: 559 DFINQMACDADIVVWKSLLAS 579
+ M D V W ++L S
Sbjct: 705 ALVESMPYQPDSVAWLTVLGS 725
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 175/582 (30%), Positives = 288/582 (49%), Gaps = 44/582 (7%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y L+ C L SL G+ VH H+L + + L N ++ MYG CG + AR F
Sbjct: 45 YDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFA 104
Query: 98 Q-RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ V + M++ +N N A++LY +M + G P + T+ ++ +CS +GS+ R
Sbjct: 105 SIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAR 164
Query: 157 QLHAHVIKSEH--GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
++HA +I++ +L QNAL+ MY K + +AR VF GI +D SW SMI++++
Sbjct: 165 EIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYAN 224
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------- 251
G+ EAL + +M G QP+ F S AC+
Sbjct: 225 NGFCDEALDLYQQMDADG-IQPDSITFTSALLACTKLVDGKAIHARIVSSNMESDFVGSA 283
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
AR F +I + + W +L+ + EA+ L+ M + D
Sbjct: 284 LINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHAD 343
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
G+T + L AC L +G +HS + + GF S V V A+LTMYAKC L A VF
Sbjct: 344 GVTYVTALGACASLGALKEGKAIHSRVFECGFQSLV-VHTALLTMYAKCGELDAARAVFN 402
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ + + W ++I+A Q +E L+ +M+A +P+ TF++V+ AC+ LE
Sbjct: 403 RVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLE 462
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
++H ++ + LA +V V N L+ +Y KCGSL A+ F D+VSW+++I YA
Sbjct: 463 AGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYA 522
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPT 537
Q G G EAL L+ M S GV P+ VT+ L+AC+ G ++ G ++ R+++N+ +
Sbjct: 523 QHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQ-SFRSS 581
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ +V++ R G + A M D++ W ++ ++
Sbjct: 582 LMVQTALVNMYGRCGRLETARSMFEDMG-QRDVLSWTAMTSA 622
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 188/369 (50%), Gaps = 48/369 (13%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S+ + EAL YD R T++ +++ACSS L+ G K+H H+ S+
Sbjct: 417 ISAYAQAGHTQEALELYD-QMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSE 475
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+V +QN ++ MY KCGSLE A+ F+ ++++VSW AMI +Q+ +A+ LY
Sbjct: 476 LASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQ 535
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH-GSHLIAQNALIAMYTKF 184
M GV+P + T S + AC+ GS+ LGR++H+ V+K++ S L+ Q AL+ MY +
Sbjct: 536 TMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRC 595
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
R+ AR++F + ++DV SW +M +A+++ G+ + L + EM+ HG +PNE F S+
Sbjct: 596 GRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHG-IRPNEITFTSI 654
Query: 245 FSACSN---FARIL--FNEIDS-------------------------------------P 262
CS+ AR + F E+ S P
Sbjct: 655 LVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQP 714
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQV 321
D +W ++ +HS+A+ A + R +EL P+ +++SLL + L Q ++V
Sbjct: 715 DSVAWLTVLGSCKTHSDADTAKR--AARRVKELDPENTSLYSLLSSIFTAAGLPQEALEV 772
Query: 322 HSYIIKMGF 330
+ +MG
Sbjct: 773 QLSMKEMGL 781
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 191/620 (30%), Positives = 323/620 (52%), Gaps = 44/620 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS+ + L+ +A+ + + T + T +I AC+ L L LG+ +H
Sbjct: 69 NAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMAT 128
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
DV + N ++ MYGKCG +E+A F+ MP+RN+VSW ++I G S+N ++
Sbjct: 129 KMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFN 188
Query: 123 LYIQML--QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ +ML + +P T +++ C+G + G +H +K L+ N+LI M
Sbjct: 189 AFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDM 248
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG------------------------ 216
Y+K + +A+ +F +K++ SW SMI +++
Sbjct: 249 YSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEF 308
Query: 217 ------------YELEALCHFNEMLHHGAYQPNEFI---FGSVFSACSNF--ARILFNEI 259
EL++L + Q NE + F + ++ C + +F+ +
Sbjct: 309 TILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLM 368
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
D+ ++SWNAL+ G A +S+ +A+ L+ +M D L PD T+ SLL AC +L+ G
Sbjct: 369 DTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGE 428
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
++H + ++ G + + ++L++Y C A ++F + ++ VSWN +IA Q+
Sbjct: 429 EIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGM-EHRSLVSWNVMIAGYSQN 487
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+E LF +ML+ I+P I V GAC+++++L + +LHC+ K L D+FV
Sbjct: 488 GLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVS 547
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
+ ++D+Y K G +G ++++F+ + DV SW+ +I GY G G EAL+LF +M LG+
Sbjct: 548 SSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLK 607
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
P+ T G+L ACSH GLVE+GL + M N + I P EH +CVVD+L RAG + +A
Sbjct: 608 PDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALR 667
Query: 560 FINQMACDADIVVWKSLLAS 579
I +M D D +W SLL+S
Sbjct: 668 LIEEMPGDPDSRIWSSLLSS 687
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 167/586 (28%), Positives = 295/586 (50%), Gaps = 54/586 (9%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSK--CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
L+ AC + +++GR++H+ + S C D VL I+ MY CGS D+RM FDK+ +
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCN-DFVLNTRIITMYSMCGSPSDSRMVFDKLRR 62
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+N+ W A+++ ++N DA+ ++ +++ + P FT +IKAC+GL + LG+
Sbjct: 63 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 122
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H K + S + NALIAMY K + +A VF + +++ SW S+I FS+ G+
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGF 182
Query: 218 ELEALCHFNEML-HHGAYQPNEFIFGSVFSACS--------------------------- 249
E+ F EML ++ P+ +V C+
Sbjct: 183 LQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVN 242
Query: 250 -------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR--DRE 294
+ A++LF++ D ++ SWN++I G A + L +M+ D +
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAK 302
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ D T+ ++L C+ R L ++H Y + G SN V NA + Y +C LC++
Sbjct: 303 MKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSE 362
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
VF +L SWN+++ Q++ + L+ +M S + PD T ++ AC++M
Sbjct: 363 RVF-DLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRM 421
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
SL ++H + + GLA D F+ L+ +YI CG +A+ LF+ ME+ +VSW+ +I
Sbjct: 422 KSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMI 481
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEY 532
GY+Q G DEA+ LF +M S G+ P + ++ V ACS + + G LH + + +
Sbjct: 482 AGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLT 541
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
I S ++D+ A+ GC+ ++ +++ + D+ W ++A
Sbjct: 542 EDIFV---SSSIIDMYAKGGCIGLSQRIFDRLR-EKDVASWNVIIA 583
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 207/431 (48%), Gaps = 46/431 (10%)
Query: 140 GSIIKACSGLGSVCLGRQLHAHVIKS-EHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
G +++AC + +GR+LH V S + + + +I MY+ D+R VF +
Sbjct: 2 GVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLR 61
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------- 251
RK++ W ++++A+++ +A+ F+E++ ++P+ F V AC+
Sbjct: 62 RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQ 121
Query: 252 ---------------------------------ARILFNEIDSPDLASWNALIAGVASHS 278
A +F + +L SWN++I G + +
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENG 181
Query: 279 NANEAMSLFSEM--RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
E+ + F EM + +PD T+ ++L C G + +GM VH +K+G + + V
Sbjct: 182 FLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMV 241
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA-- 394
N+++ MY+KC L A L+F + K + VSWNS+I + F L +M
Sbjct: 242 NNSLIDMYSKCRFLSEAQLLFDKNDKK-NIVSWNSMIGGYAREEDVCRTFYLLQKMQTED 300
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
+++K D T +V+ C + + L+ + +LH Y + GL + V N + Y +CG+L S
Sbjct: 301 AKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCS 360
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
+ ++F+ M+ V SW++L+ GYAQ +AL L+ +M G+ P+ T+ +L ACS
Sbjct: 361 SERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSR 420
Query: 515 VGLVEEGLHLY 525
+ + G ++
Sbjct: 421 MKSLHYGEEIH 431
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 173/384 (45%), Gaps = 42/384 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T ++ C LQ +++H + Q + ++ N + Y +CG+L + FD M
Sbjct: 309 TILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLM 368
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ V SW A++ G +QN A+ LY+QM SG+ P FT GS++ ACS + S+ G
Sbjct: 369 DTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGE 428
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H +++ +L+++Y + A+ +F G+ + + SW MIA +S+ G
Sbjct: 429 EIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNG 488
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
EA+ F +ML G QP E V ACS + +
Sbjct: 489 LPDEAINLFRQMLSDG-IQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVS 547
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+F+ + D+ASWN +IAG H EA+ LF +M L
Sbjct: 548 SSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLK 607
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALL 355
PD T +L AC + G++ + ++ + + + ++ M + + +AL
Sbjct: 608 PDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALR 667
Query: 356 VFKELGKNADSVSWNSIIAACLQH 379
+ +E+ + DS W+S++++C H
Sbjct: 668 LIEEMPGDPDSRIWSSLLSSCRIH 691
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 160/332 (48%), Gaps = 16/332 (4%)
Query: 9 LCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKC 66
LC ++ A D T+ + P T L+ ACS ++SL G ++H L +
Sbjct: 380 LCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGL 439
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
D + +L++Y CG A++ FD M R++VSW MIAG SQN ++AI L+ Q
Sbjct: 440 AVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQ 499
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
ML G+ P + + ACS L ++ LG++LH +K+ + +++I MY K
Sbjct: 500 MLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGC 559
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
I ++ +F + KDV SW +IA + G EAL F +ML G +P++F F +
Sbjct: 560 IGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLG-LKPDDFTFTGILM 618
Query: 247 ACSNFARI-----LFNEI-----DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
ACS+ + FN++ P L + ++ + ++A+ L EM
Sbjct: 619 ACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGD--- 675
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
PD SLL +C L G +V + ++++
Sbjct: 676 PDSRIWSSLLSSCRIHGNLGLGEKVANKLLEL 707
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 182/614 (29%), Positives = 324/614 (52%), Gaps = 43/614 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S L + L EA++ + + + I P + ++SA + ++ +LG ++H ++
Sbjct: 233 ISGLSQNGLEEEAILLF-CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG 291
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ + N ++ +Y + L A F M R+ VS+ ++I+G Q + A++L+
Sbjct: 292 FHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFT 351
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + + P T S++ AC+ +G++ G QLH+H IK+ + +I + +L+ +Y+K
Sbjct: 352 KMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCA 411
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A F +++ W M+ A+ +L ++ F +M G PN+F + S+
Sbjct: 412 DVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI-PNQFTYPSIL 470
Query: 246 SACSNFARILFNE----------------------------------------IDSPDLA 265
C++ + E + D+
Sbjct: 471 RTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVV 530
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW A+IAG H +EA+ LF EM R + D + S + AC G L QG Q+H+
Sbjct: 531 SWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQS 590
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
GF +++ + NA++++YA+C + A L F+++G + +++SWNS+++ Q EE
Sbjct: 591 YAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG-DKNNISWNSLVSGLAQSGYFEEA 649
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
++F RML ++ + + T+ + A A +A+++ Q+H + KTG + V N L+ +
Sbjct: 650 LQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISL 709
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y K GS+ A + FN M +V+SW+++I GY+Q GCG EAL+LF M+ G+ PN VT
Sbjct: 710 YAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTF 769
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
VGVL+ACSH+GLV+EGL + M + ++P EH CVVDLL RAG + A ++I +M
Sbjct: 770 VGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMP 829
Query: 566 CDADIVVWKSLLAS 579
AD ++W++LL++
Sbjct: 830 IPADAMIWRTLLSA 843
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 155/583 (26%), Positives = 284/583 (48%), Gaps = 45/583 (7%)
Query: 37 TYAGLISACSSLR-SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
T+AG++ AC + ++VH ++ N ++++Y K G +E A+ F+
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ +++V+W AMI+G SQN E +AI L+ M S + P + S++ A + + LG
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
QLH VIK S N L+A+Y++ +++ A +FS + +D S+ S+I+ +
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G+ AL F +M +P+ S+ SAC++
Sbjct: 341 GFSDRALELFTKM-QRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIIL 399
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A F ++ ++ WN ++ N +++ +F +M+ +
Sbjct: 400 EGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGM 459
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
+P+ T S+L C LY G Q+H+++IK GF NV VC+ ++ MYAK L AL
Sbjct: 460 IPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALR 519
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+ + L ++ D VSW ++IA +QH+ E +LF M I+ D+I F + ACA +
Sbjct: 520 ILRRLPED-DVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIR 578
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+L Q+H G D+ + N L+ +Y +CG + A F + + + +SW+SL+
Sbjct: 579 ALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVS 638
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
G AQ G +EAL++F RM N+ T ++A + + +++G ++ M + G
Sbjct: 639 GLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHS-MVLKTGYD 697
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
RE + ++ L A++G + +A N M+ + +++ W +++
Sbjct: 698 SEREVSNSLISLYAKSGSISDAWREFNDMS-ERNVISWNAMIT 739
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 158/590 (26%), Positives = 278/590 (47%), Gaps = 47/590 (7%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+R Y L+ C + SL ++H I S + +L + +++ Y + G A
Sbjct: 54 VRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAV 113
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+ R+V SW MI L+ +ML G+ P +TF ++KAC G G
Sbjct: 114 KVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVG-G 172
Query: 151 SVCLG--RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+ +Q+H+ S + N LI +Y+K I A+ VF+ I KD+ +W +M
Sbjct: 173 DIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAM 232
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------- 251
I+ S+ G E EA+ F +M H P ++ SV SA +
Sbjct: 233 ISGLSQNGLEEEAILLFCDM-HASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG 291
Query: 252 -----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
A +F+ ++S D S+N+LI+G+ ++ A+ LF+
Sbjct: 292 FHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFT 351
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+M+ L PD +TV SLL AC L++GMQ+HS+ IK G +++ + ++L +Y+KC+
Sbjct: 352 KMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCA 411
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ A F + + V WN ++ A Q + + F +F +M + P+ T+ ++
Sbjct: 412 DVETAHKFFLTT-ETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSIL 470
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
C + +L + Q+H ++ KTG +V+V + L+D+Y K G L A ++ + DVV
Sbjct: 471 RTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVV 530
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
SW+++I GY Q EAL+LF M G+ + + ++AC+ + + +G ++
Sbjct: 531 SWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIH-AQ 589
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G + ++ L AR G + EA ++ D + + W SL++
Sbjct: 590 SYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG-DKNNISWNSLVS 638
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 250/522 (47%), Gaps = 61/522 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N +S L +Q + AL + Q + ++P T A L+SAC+S+ +L G ++H H
Sbjct: 331 NSLISGLVQQGFSDRALELFTKMQRDC---LKPDCITVASLLSACASVGALHKGMQLHSH 387
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ + D++L+ +L++Y KC +E A F N+V W M+ Q +D+
Sbjct: 388 AIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDS 447
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+++ QM G++P QFT+ SI++ C+ LG++ LG Q+H HVIK+ ++ + LI M
Sbjct: 448 FEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDM 507
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K+ ++ A + + DV SW +MIA + + EAL F EM + G Q +
Sbjct: 508 YAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGI-QFDNIG 566
Query: 241 FGSVFSACSN--------------------------------FAR--------ILFNEID 260
F S SAC+ +AR + F +I
Sbjct: 567 FASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG 626
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ SWN+L++G+A EA+ +F M E + T S + A + QG Q
Sbjct: 627 DKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQ 686
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+HS ++K G+DS V N+++++YAK + +A F ++ + + +SWN++I QH
Sbjct: 687 IHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSER-NVISWNAMITGYSQHG 745
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA-------SLEMVTQLHCYITKTGLA 433
E RLF M I P+H+TF V+ AC+ + E + ++H + K+
Sbjct: 746 CGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKS--- 802
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENP-DVVSWSSLI 474
+ +V ++D+ + G L A + M P D + W +L+
Sbjct: 803 -EHYVC--VVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLL 841
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 132/506 (26%), Positives = 236/506 (46%), Gaps = 51/506 (10%)
Query: 117 ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA 176
++ I+L M + GV + +++ C GS+ +LH + KS + ++
Sbjct: 39 KSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDS 98
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
L+ Y + A VF + + V SW MI F + C F ML G P
Sbjct: 99 LVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGI-TP 157
Query: 237 NEFIFGSVFSACS------NF-----------------------------------ARIL 255
N + F V AC N+ A+ +
Sbjct: 158 NGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKV 217
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
FN I D+ +W A+I+G++ + EA+ LF +M E+ P + S+L A ++ L
Sbjct: 218 FNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSAST-KIQL 276
Query: 316 YQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
++ G Q+H +IK GF S VCN ++ +Y++ L +A +F + + D VS+NS+I+
Sbjct: 277 FELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTM-NSRDGVSYNSLIS 335
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
+Q ++ LF++M +KPD IT ++ ACA + +L QLH + K G++
Sbjct: 336 GLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSA 395
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
D+ + L+D+Y KC + +A K F E ++V W+ +++ Y Q ++ ++F +M+
Sbjct: 396 DIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQ 455
Query: 495 SLGVSPNLVTLVGVLTACSHVG--LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAG 552
G+ PN T +L C+ +G + E +H + I + G CS ++D+ A+ G
Sbjct: 456 MEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVI---KTGFQLNVYVCSVLIDMYAKYG 512
Query: 553 CVHEAEDFINQMACDADIVVWKSLLA 578
+ A + ++ D D+V W +++A
Sbjct: 513 QLALALRILRRLPED-DVVSWTAMIA 537
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 196/394 (49%), Gaps = 54/394 (13%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY ++ C+SL +L LG ++H H++ + Q +V + + +++MY K G L A ++
Sbjct: 465 TYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRL 524
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+ +VVSWTAMIAG Q+ ++A++L+ +M G+ F S I AC+G+ ++ G+
Sbjct: 525 PEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQ 584
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+HA + G+ L NALI++Y + RI +A F I K+ SW S+++ ++ G
Sbjct: 585 QIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSG 644
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFG---------------------------------- 242
Y EAL F ML A + N F +G
Sbjct: 645 YFEEALQVFVRMLRTEA-EVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVS 703
Query: 243 ----SVFSACSNFARIL--FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
S+++ + + FN++ ++ SWNA+I G + H EA+ LF EM+ ++
Sbjct: 704 NSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIM 763
Query: 297 PDGLTVHSLLCAC--IG----RLTLYQGM-QVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
P+ +T +L AC IG L ++ M ++H + K S VC ++ + +
Sbjct: 764 PNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPK----SEHYVC--VVDLLGRAGQ 817
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A+ KE+ AD++ W ++++AC+ H E
Sbjct: 818 LDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIE 851
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 169/326 (51%), Gaps = 4/326 (1%)
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+F+E + + SWN +I + + + LF M + P+G T +L AC+G
Sbjct: 115 VFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDI 174
Query: 315 LYQGM-QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
+ + QVHS GFDS+ V N ++ +Y+K + +A VF + D V+W ++I
Sbjct: 175 AFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMK-DIVTWVAMI 233
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
+ Q+ EE LF M AS+I P + V+ A K+ E+ QLHC + K G
Sbjct: 234 SGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFH 293
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
+ +V NGL+ +Y + L SA ++F+ M + D VS++SLI G Q G D AL+LFT+M
Sbjct: 294 SETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKM 353
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
+ + P+ +T+ +L+AC+ VG + +G+ L+ + G+ ++DL ++
Sbjct: 354 QRDCLKPDCITVASLLSACASVGALHKGMQLHS-HAIKAGMSADIILEGSLLDLYSKCAD 412
Query: 554 VHEAEDFINQMACDADIVVWKSLLAS 579
V A F + +IV+W +L +
Sbjct: 413 VETAHKFFLTTETE-NIVLWNVMLVA 437
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 168/315 (53%), Gaps = 15/315 (4%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
++ + ++++EAL ++ I+ +A ISAC+ +R+L+ G+++H +
Sbjct: 536 IAGYVQHDMFSEALQLFE-EMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAG 594
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
D+ + N ++++Y +CG +++A + F+K+ +N +SW ++++G +Q+ +A+++++
Sbjct: 595 FGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFV 654
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+ML++ FT+GS I A + L ++ G+Q+H+ V+K+ + S N+LI++Y K
Sbjct: 655 RMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSG 714
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I DA F+ ++ ++V SW +MI +S+ G +EAL F EM G PN F V
Sbjct: 715 SISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGI-MPNHVTFVGVL 773
Query: 246 SACSNFARI---------LFNEID-SPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
SACS+ + +F D P + ++ + + AM EM +
Sbjct: 774 SACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEM---PI 830
Query: 296 LPDGLTVHSLLCACI 310
D + +LL AC+
Sbjct: 831 PADAMIWRTLLSACV 845
>gi|302759917|ref|XP_002963381.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
gi|300168649|gb|EFJ35252.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
Length = 860
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 188/620 (30%), Positives = 309/620 (49%), Gaps = 60/620 (9%)
Query: 12 QNLYNE-ALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVH---DHILLSKCQ 67
QN Y A+ + + + P TYAG+++ACS+L L+ G ++H I +
Sbjct: 208 QNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIHRIYTLGLE 267
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
D VLQ+ IL+++ +CGSL R FD+MP R VV+WT MIA +Q +A++LY M
Sbjct: 268 YDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCM 327
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
+ P ++++ACS L ++ GR +H+ + + L+ Q L+ MY K +
Sbjct: 328 ---DIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDL 384
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
+AR F G +DV SW S+I A+S + EAL F+ M G +PN F +V A
Sbjct: 385 AEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGV-EPNSITFCTVIDA 443
Query: 248 CS----------------------------------------NFARILFNEIDSPDLASW 267
CS +FAR++F+ I SW
Sbjct: 444 CSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARMVFDSIPVKRYPSW 503
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
++ + + +++EA+ ++S + P + L +C + + +H I
Sbjct: 504 RVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKS 563
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
F ++ + N ++ +YAKC L A LVF ++ + + VSW ++I Q+ + E
Sbjct: 564 SDFYPDLVLSNVLMNVYAKCGELEKARLVFDQMTEK-NEVSWTTMIGGYAQNGRPAEALE 622
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
L+ M ++P+ I F V+ +CA + +L ++H ++ GL + ++ L+++Y
Sbjct: 623 LYKAM---DVQPNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYA 679
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
KCG LG AR+ F+ PD +W+S+ YAQFG G + L+L+ M GV PN +TL+
Sbjct: 680 KCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLS 739
Query: 508 VLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI------ 561
VL ACSH+G++EE H + M ++GI PT EH SC+ DLL R+G + EAE +
Sbjct: 740 VLVACSHMGMLEECEHRFECMVADHGIAPTSEHYSCMTDLLGRSGRLEEAEKVVKMASGE 799
Query: 562 --NQMACDADIVVWKSLLAS 579
++ A + W S L +
Sbjct: 800 SGSEAASPVAVSAWMSFLGA 819
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 168/618 (27%), Positives = 290/618 (46%), Gaps = 55/618 (8%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S+ ++ + EAL Y+ + + T+A ++SAC+ L+ ++ G+KVH I S
Sbjct: 2 ISAYAQKGYHREALELYE-EMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ D VLQN +LN+Y KCG LE++R F+ M +R V +W MI Q+ +A++ +
Sbjct: 61 ARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFR 120
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS--EHGSHLIAQNALIAMYTK 183
+M P TF S++ AC + G+ +H + S + + I QN+L+ MY K
Sbjct: 121 RM---DAPPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGK 177
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
+ DA VF GI RK+ SW +MI A+++ GYE A+ F +M+ G +P+ +
Sbjct: 178 CGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAG 237
Query: 244 VFSACSNFA-------------------------------------------RILFNEID 260
V +ACS R +F+ +
Sbjct: 238 VLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMP 297
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ +W +IA + EA+ L+ M ++ PD + + ++L AC L QG
Sbjct: 298 HRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQGRA 354
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
VHS I F+ ++ V ++ MY KC L A F K D +SW S+I A N
Sbjct: 355 VHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGF-KARDVISWTSLITAYSHEN 413
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
E +F M ++P+ ITF V+ AC++++SL LH + TG D FV N
Sbjct: 414 FGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGN 473
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+ +Y K G + AR +F+ + SW +++ Q G EAL++++R+ G P
Sbjct: 474 ALVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRP 533
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
L +C+ + V ++ ++++ P + ++++ A+ G + +A
Sbjct: 534 GSPIFSAALVSCTALEDVSRARAIHGVIKSS-DFYPDLVLSNVLMNVYAKCGELEKARLV 592
Query: 561 INQMACDADIVVWKSLLA 578
+QM + + V W +++
Sbjct: 593 FDQMT-EKNEVSWTTMIG 609
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 220/465 (47%), Gaps = 54/465 (11%)
Query: 107 MIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE 166
MI+ +Q +A++LY +M + GV P TF ++ AC+GL + G+++H + +S
Sbjct: 1 MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
+ QNAL+ +Y K + ++R +F + R+ V +W +MI A+ + + EAL F
Sbjct: 61 ARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFR 120
Query: 227 EMLHHGAYQPNEFIFGSVFSACSNF----------------------------------- 251
M P+ F SV AC +
Sbjct: 121 RM----DAPPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYG 176
Query: 252 -------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE-MRDRELLPDGLTVH 303
A +F+ I + SW A+I A + A+ +F + M + + PD +T
Sbjct: 177 KCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYA 236
Query: 304 SLLCACIGRLTLYQGMQVHSYIIK---MGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
+L AC L GM++H+ I + +G + + + + IL+++A+C L +F +
Sbjct: 237 GVLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRM 296
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
+ V+W ++IAA Q + E L+ M I+PD I ++V+ AC+++ +LE
Sbjct: 297 -PHRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQG 352
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
+H I + V L+D+Y+KCG L AR+ F+ + DV+SW+SLI Y+
Sbjct: 353 RAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHE 412
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
G EAL++F M GV PN +T V+ ACS + + G L+
Sbjct: 413 NFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALH 457
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 162/315 (51%), Gaps = 10/315 (3%)
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
+I+ A EA+ L+ EM +R + P+ T +L AC G + +G +VH I +
Sbjct: 1 MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
+ + NA+L +YAKC L + +F+ + + +WN++I A +QH+ +E F
Sbjct: 61 ARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRT-VATWNTMITAYVQHDFFQEALEAF 119
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI--TKTGLAFDVFVMNGLMDIYI 447
RM A P ITF V+GAC LE +H I + + D + N L+ +Y
Sbjct: 120 RRMDA---PPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYG 176
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNLVTLV 506
KCGSL A ++F+ + + SW+++I YAQ G A+++F M S G V P+ +T
Sbjct: 177 KCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYA 236
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC--SCVVDLLARAGCVHEAEDFINQM 564
GVLTACS +G +E G+ ++ ++ Y + + ++ L AR G + + ++M
Sbjct: 237 GVLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRM 296
Query: 565 ACDADIVVWKSLLAS 579
+V W +++A+
Sbjct: 297 P-HRTVVTWTTMIAA 310
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 187/440 (42%), Gaps = 63/440 (14%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+++ +N EAL + S + T+ +I ACS L SL GR +H ++ +
Sbjct: 406 ITAYSHENFGREALEVF-HSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATG 464
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
D + N +++MY K G ++ ARM FD +P + SW M+ +QN ++A+++Y
Sbjct: 465 HISDEFVGNALVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYS 524
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
++ G PG F + + +C+ L V R +H + S+ L+ N L+ +Y K
Sbjct: 525 RIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCG 584
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ AR VF + K+ SW +MI +++ G EAL + M QPN F V
Sbjct: 585 ELEKARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAM----DVQPNFIAFVPVI 640
Query: 246 SACSN----------------------------------------FARILFNEIDSPDLA 265
S+C++ AR F+ PD
Sbjct: 641 SSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAG 700
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC--IGRLTLYQGMQVHS 323
+WN++ A + ++ + L+ EM + + P+G+T+ S+L AC +G L + +
Sbjct: 701 AWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGMLEECE-HRFEC 759
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK----ELGKNADSV----SWNSIIAA 375
+ G + + + + L A V K E G A S +W S + A
Sbjct: 760 MVADHGIAPTSEHYSCMTDLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFLGA 819
Query: 376 CLQHNQ-------AEELFRL 388
C HN AE+L+ L
Sbjct: 820 CKTHNDWGRAAGAAEKLYEL 839
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 195/625 (31%), Positives = 320/625 (51%), Gaps = 62/625 (9%)
Query: 11 KQNLYNEALVAYDFSQNNTN---------IRIRPSTYAG-----LISACSSLRSLQLGRK 56
+Q L + ++FS+N+ N +R S G ++ C L +G++
Sbjct: 54 QQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQ 113
Query: 57 VHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQ 116
VH + DV + +++MY K S+ED FD+M +NVVSWT+++AG QN
Sbjct: 114 VHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGL 173
Query: 117 ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA 176
A+KL+ QM G+ P FTF +++ + G+V G Q+H VIKS S + N+
Sbjct: 174 NEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNS 233
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
++ MY+K + DA+ VF + ++ SW SMIA F G +LEA F M G +
Sbjct: 234 MVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGV-KL 292
Query: 237 NEFIFGSVFSACSNFARILF------------------------------NEIDSP---- 262
+ IF +V C+N + F +EID
Sbjct: 293 TQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLF 352
Query: 263 -------DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
++ SW A+I+G + + AM+LF +MR + P+ T ++L A
Sbjct: 353 CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAA---- 408
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
Q+H+ ++K ++++ V A+ Y+K A +F EL D V+W+++++
Sbjct: 409 VSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIF-ELIDEKDIVAWSAMLSG 467
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC-AKMASLEMVTQLHCYITKTGLAF 434
Q E ++F ++ ++P+ TF+ V+ AC A AS+E Q H K+G +
Sbjct: 468 YAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSN 527
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
+ V + L+ +Y K G++ SA ++F + D+VSW+S+I GYAQ GCG ++LK+F MR
Sbjct: 528 ALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMR 587
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCV 554
S + + +T +GV++AC+H GLV EG + +M +Y I+PT EH SC+VDL +RAG +
Sbjct: 588 SKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGML 647
Query: 555 HEAEDFINQMACDADIVVWKSLLAS 579
+A D IN+M A +W++LLA+
Sbjct: 648 EKAMDLINKMPFPAGATIWRTLLAA 672
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 137/529 (25%), Positives = 247/529 (46%), Gaps = 52/529 (9%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FD+ PQ+ + ++ S+N Q +A+ L++ + +SG + ++K C L
Sbjct: 49 FDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDR 108
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
+G+Q+H IK + +L+ MY K + + D VF + K+V SW S++A +
Sbjct: 109 IVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGY 168
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS----------------------- 249
+ G +AL F++M G +PN F F +V +
Sbjct: 169 RQNGLNEQALKLFSQMQLEG-IKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227
Query: 250 -----------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
+ A+ +F+ +++ + SWN++IAG ++ EA LF MR
Sbjct: 228 IFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287
Query: 293 R--ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+L LCA I ++ + Q+H +IK G D ++ + A++ Y+KCS +
Sbjct: 288 EGVKLTQTIFATVIKLCANIKEMSFAK--QLHCQVIKNGSDFDLNIKTALMVAYSKCSEI 345
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
+A +F + + VSW +II+ +Q+ + + LF +M ++P+H T++ ++ A
Sbjct: 346 DDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA 405
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
A ++ +Q+H + KT V L D Y K G A K+F ++ D+V+W
Sbjct: 406 NAAVSP----SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAW 461
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC-SHVGLVEEGLHLYRIME 529
S+++ GYAQ G + A+K+F ++ GV PN T VL AC + VE+G +
Sbjct: 462 SAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSC-S 520
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ G S +V + A+ G + A + + D D+V W S+++
Sbjct: 521 IKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQV-DRDLVSWNSMIS 568
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 190/395 (48%), Gaps = 54/395 (13%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+++ + +A +I C++++ + +++H ++ + D+ ++ ++ Y KC ++DA
Sbjct: 290 VKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAF 349
Query: 91 MGFDKMPQ-RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F M +NVVSWTA+I+G QN + + A+ L+ QM + GV P FT+ +I+ A + +
Sbjct: 350 KLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAV 409
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
Q+HA V+K+ + + AL Y+K +A +F I KD+ +W +M+
Sbjct: 410 SP----SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAML 465
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-------------------SN 250
+ ++++G ++E L +PNEF F SV +AC S
Sbjct: 466 SGYAQMG-DIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSG 524
Query: 251 FARIL----------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
F+ L F DL SWN++I+G A H +++ +F
Sbjct: 525 FSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFE 584
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN-VPVC---NAILTMY 344
EMR + L DG+T ++ AC + +G + ++K D + VP + ++ +Y
Sbjct: 585 EMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVK---DYHIVPTMEHYSCMVDLY 641
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
++ +L A+ + ++ A + W +++AAC H
Sbjct: 642 SRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH 676
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 183/617 (29%), Positives = 309/617 (50%), Gaps = 49/617 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + L EAL Y + + P + ++S+C+ GR +H
Sbjct: 115 LSGYAQNGLGEEALGLYR-QMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHG 173
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
++ + N ++ +Y +CGS A F MP R+ V++ +I+G +Q A++++
Sbjct: 174 FCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFE 233
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M SG+ P T S++ AC+ LG + G QLH+++ K+ S I + +L+ +Y K
Sbjct: 234 EMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCG 293
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSK---LGYELEALCHFNEMLHHGAYQPNEFIFG 242
+ A +F+ R +V W M+ AF + L E C + +PN+F +
Sbjct: 294 DVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQ----MQAAGIRPNQFTYP 349
Query: 243 SVFSACS----------------------------------------NFARILFNEIDSP 262
+ C+ AR + +
Sbjct: 350 CILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK 409
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ SW ++IAG H +A++ F EM+ + PD + + S + C G + QG+Q+H
Sbjct: 410 DVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIH 469
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ I G+ +V + NA++ +YA+C + A F+E+ + D ++ N +++ Q
Sbjct: 470 ARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEM-ELKDGITGNGLVSGFAQSGLH 528
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
EE ++F RM S +K + TF + A A +A ++ Q+H + KTG +F+ V N L
Sbjct: 529 EEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNAL 588
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+ +Y KCGS A+ F+ M + VSW+++I +Q G G EAL LF +M+ G+ PN
Sbjct: 589 ISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPND 648
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
VT +GVL ACSHVGLVEEGL ++ M +EYGI P +H +CV+D+ RAG + A+ FI
Sbjct: 649 VTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIE 708
Query: 563 QMACDADIVVWKSLLAS 579
+M AD +VW++LL++
Sbjct: 709 EMPIAADAMVWRTLLSA 725
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 151/587 (25%), Positives = 280/587 (47%), Gaps = 47/587 (8%)
Query: 35 PSTYAGLISAC-SSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
P +A + AC + R Q+ ++H + ++ N ++++Y K G + AR F
Sbjct: 41 PLDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVF 100
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
+++ R+ VSW AM++G +QN +A+ LY QM ++GV+P + S++ +C+
Sbjct: 101 EELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFA 160
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
GR +HA K S + NA+I +Y + A VF + +D ++ ++I+ +
Sbjct: 161 QGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHA 220
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------- 251
+ G+ AL F EM G P+ S+ +AC++
Sbjct: 221 QCGHGEHALEIFEEMQFSG-LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDY 279
Query: 252 ------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
A ++FN D ++ WN ++ ++ ++ LF +M+
Sbjct: 280 IMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAA 339
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ P+ T +L C + G Q+HS +K GF+S++ V ++ MY+K L A
Sbjct: 340 GIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKA 399
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
V E+ K D VSW S+IA +QH ++ F M I PD+I + CA
Sbjct: 400 RRVL-EMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAG 458
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ ++ Q+H I +G + DV + N L+++Y +CG + A F ME D ++ + L
Sbjct: 459 INAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGL 518
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEY 532
+ G+AQ G +EALK+F RM GV N+ T V L+A +++ +++G ++ R+++ +
Sbjct: 519 VSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGH 578
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
E + ++ L + G +A+ ++M+ + + V W +++ S
Sbjct: 579 SF--ETEVGNALISLYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITS 622
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 179/397 (45%), Gaps = 50/397 (12%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IRP+ TY ++ C+ R + LG ++H + + + D+ + +++MY K G LE AR
Sbjct: 341 IRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR 400
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ + +++VVSWT+MIAG Q+ DA+ + +M + G+ P S I C+G+
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN 460
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G Q+HA + S + + NAL+ +Y + RI +A + F + KD + +++
Sbjct: 461 AMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVS 520
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL--------------- 255
F++ G EAL F M G + N F F S SA +N A I
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGV-KHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHS 579
Query: 256 -------------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
F+E+ + SWN +I + H EA+ LF +M
Sbjct: 580 FETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQM 639
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM----GFDSNVPVCNAILTMYAK 346
+ + P+ +T +L AC + +G+ SY M G ++ ++ +
Sbjct: 640 KKEGIKPNDVTFIGVLAACSHVGLVEEGL---SYFKSMSDEYGIRPRPDHYACVIDIFGR 696
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A +E+ AD++ W ++++AC H E
Sbjct: 697 AGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIE 733
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 162/319 (50%), Gaps = 10/319 (3%)
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCA---CIGRLTLYQGM-Q 320
AS +AG +H + + +SLF+ D+ GL CA C G +Q + +
Sbjct: 7 ASLGRTLAGFLAHEDPAKVLSLFA---DKARQHGGLGPLDFACALRACRGNGRRWQVVPE 63
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H+ + G V N ++ +Y+K ++ A VF+EL D+VSW ++++ Q+
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSAR-DNVSWVAMLSGYAQNG 122
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
EE L+ +M + + P + V+ +C K +H K G ++FV N
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
++ +Y++CGS A ++F M + D V++++LI G+AQ G G+ AL++F M+ G+SP
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ VT+ +L AC+ +G +++G L+ + + GI ++DL + G V A
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYL-FKAGISSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 561 INQMACDADIVVWKSLLAS 579
N + ++V+W +L +
Sbjct: 302 FNS-SDRTNVVLWNLMLVA 319
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 201/618 (32%), Positives = 315/618 (50%), Gaps = 51/618 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ LC+ EAL + + R +Y ++ CS +RSL+ G++ H +
Sbjct: 65 NLHIQRLCRSGDLEEALGL--LGSDGVDDR----SYGAVLQLCSEVRSLEGGKRAHFLVR 118
Query: 63 ---LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ-RNVVSWTAMIAGCSQNYQEN 118
L + D VL ++ MY KCG LE+AR FD+MPQ +V WTA+++G ++
Sbjct: 119 ASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLR 178
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
+ + L+ +M GV P +T ++K +GLGS+ G +H + K GS NAL+
Sbjct: 179 EGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALM 238
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM---------- 228
A Y K +R DA VF G+ +DV SW SMI+ + G +A+ F M
Sbjct: 239 AFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSA 298
Query: 229 -----------LH--------HGAYQPNEFIFGS--------VFSACSNFARI--LFNEI 259
LH HG FI + ++S CS++ +F +
Sbjct: 299 TLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNM 358
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
++ SW A+I ++ LF EM PD + S L A G L G
Sbjct: 359 VQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGK 418
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
VH Y I+ G + + V NA++ MY KC + A L+F + + D +SWN++I ++
Sbjct: 419 SVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGV-VSKDMISWNTLIGGYSRN 477
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
N A E F LF+ ML Q++P+ +T ++ A A ++SLE ++H Y + G D FV
Sbjct: 478 NLANEAFSLFTEMLL-QLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVA 536
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
N L+D+Y+KCG+L AR+LF+ + N +++SW+ ++ GY G G +A+ LF +MR G++
Sbjct: 537 NALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIA 596
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
P+ + +L ACSH GL +EG + M E+ I P +H +C+VDLL G + EA +
Sbjct: 597 PDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYE 656
Query: 560 FINQMACDADIVVWKSLL 577
FI+ M + D +W SLL
Sbjct: 657 FIDSMPIEPDSSIWVSLL 674
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 138/288 (47%), Gaps = 17/288 (5%)
Query: 34 RPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP +A + A + L+ G+ VH + + + + + + N ++ MY KCG++E+A++
Sbjct: 395 RPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKL 454
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD + ++++SW +I G S+N N+A L+ +ML + P T I+ A + L S
Sbjct: 455 IFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSS 513
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ GR++HA+ ++ + NALI MY K +L AR +F ++ K++ SW M+A
Sbjct: 514 LERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAG 573
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARILFNEIDS 261
+ G +A+ F +M G P+ F ++ ACS+ F +
Sbjct: 574 YGMHGRGRDAIALFEQMRVSG-IAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIE 632
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
P L + ++ + + N EA M + PD SLL C
Sbjct: 633 PRLKHYTCMVDLLINTGNLKEAYEFIDSM---PIEPDSSIWVSLLRGC 677
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 113/242 (46%), Gaps = 6/242 (2%)
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
++ MY KC L NA VF E+ + +D W ++++ + E LF +M ++P
Sbjct: 135 LVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRP 194
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D T + V+ A + S+E +H + K G V N LM Y K A +F
Sbjct: 195 DAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVF 254
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ M + DV+SW+S+I G G D+A++LF RM G + TL+ VL AC+ + L+
Sbjct: 255 DGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLF 314
Query: 520 EG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
G +H Y + + G I + ++D+ + M ++V W +++
Sbjct: 315 LGRVVHGYSV---KTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMV-QKNVVSWTAMI 370
Query: 578 AS 579
S
Sbjct: 371 TS 372
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 186/548 (33%), Positives = 289/548 (52%), Gaps = 39/548 (7%)
Query: 35 PST--YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
P T Y LI+A S L ++ R V D + QP+ N +L+ Y K G L +
Sbjct: 38 PETFLYNNLINAYSKLGNITYARHVFDKM----PQPNSFSWNTMLSAYSKSGDLSTMQEI 93
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP-GQFTFGSIIKACSGLGS 151
F MP R+ VSW ++I+G +A+K Y M++ GV+ + TF +++ S G
Sbjct: 94 FSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGC 153
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
V LGRQ+H ++K G+++ ++L+ MY K + A VF + ++V + +MI
Sbjct: 154 VDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITG 213
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALI 271
+ G ++ + LF+ + D SW +I
Sbjct: 214 LLRSGMVKDS-------------------------------KRLFHGMKERDSISWTTMI 242
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
G+ + EAM LF +MR + D T S+L AC G L +G ++H+ II+ G++
Sbjct: 243 TGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYN 302
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
NV V +A++ MY KC + A VFK + N + VSW +++ Q+ +EE R+F
Sbjct: 303 HNVFVGSALVDMYCKCRSVRYAEAVFKRMA-NKNVVSWTAMLVGYGQNGFSEEAVRVFCD 361
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M + I+PD T V+ +CA +ASLE Q HC +GL + V N L+ +Y KCGS
Sbjct: 362 MQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGS 421
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+ + +LF+ M D VSW++L+ GYAQFG +E + LF RM G+ P+ VT + VL+A
Sbjct: 422 IEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSA 481
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
CS GLVE G + M ++GIIP +H +C++DL RAG + EA++FIN+M D +
Sbjct: 482 CSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSI 541
Query: 572 VWKSLLAS 579
W +LL+S
Sbjct: 542 GWATLLSS 549
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 202/442 (45%), Gaps = 79/442 (17%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
EA+ Y+ + + + T++ ++ SS + LGR++H I+ V + + +
Sbjct: 120 EAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSL 179
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVV-------------------------------SWT 105
++MY K G + A FD++ +RNVV SWT
Sbjct: 180 VDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWT 239
Query: 106 AMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS 165
MI G QN E +A+ L+ M Q G+ Q+TFGS++ AC GL ++ G+++H +I+S
Sbjct: 240 TMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRS 299
Query: 166 EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHF 225
+ ++ +AL+ MY K + A VF +A K+V SW +M+ + + G+ EA+ F
Sbjct: 300 GYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVF 359
Query: 226 NEMLHHGAYQPNEFIFGSVFSACSNFARI------------------------------- 254
+M +G +P++F GSV S+C+N A +
Sbjct: 360 CDMQRNGI-EPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGK 418
Query: 255 ---------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
LF+E+ D SW AL++G A ANE + LF M + L PD +T ++
Sbjct: 419 CGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAV 478
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSN-VPVCN---AILTMYAKCSVLCNALLVFKELG 361
L AC + +G Q ++K D +P + ++ ++ + L A ++
Sbjct: 479 LSACSRAGLVERGQQYFESMLK---DHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMP 535
Query: 362 KNADSVSWNSIIAACLQHNQAE 383
+ DS+ W +++++C + E
Sbjct: 536 FSPDSIGWATLLSSCRLYGNEE 557
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 126/247 (51%), Gaps = 5/247 (2%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN ++E V I T +IS+C++L SL+ G + H L+S +
Sbjct: 348 QNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFIT 407
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ N ++ +YGKCGS+ED+ FD+M R+ VSWTA+++G +Q + N+ I L+ +ML G
Sbjct: 408 VSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQG 467
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILD 189
+ P TF +++ ACS G V G+Q ++K +HG + + +I ++ + R+ +
Sbjct: 468 LKPDAVTFIAVLSACSRAGLVERGQQYFESMLK-DHGIIPFSDHYTCMIDLFGRAGRLEE 526
Query: 190 ARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI-FGSVFSA 247
A+N + + D W +++++ G E +L P +I S+++A
Sbjct: 527 AKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAA 586
Query: 248 CSNFARI 254
++ +
Sbjct: 587 KGKWSNV 593
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 194/648 (29%), Positives = 318/648 (49%), Gaps = 111/648 (17%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+ C+SLRS+ + RK+H ++ + + LQNH+LNMY CG + DA F + NV
Sbjct: 11 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 70
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQ------SGVMPGQFTFGSI---IKACSGLGSV 152
SW MI+G + + Q +A KL+ +M + + +M G F G + IKA LG +
Sbjct: 71 YSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYL 130
Query: 153 CLGRQLHAHVIKSEHG-------------------------------SHLIAQNALIAMY 181
L QLH K + G L N++I Y
Sbjct: 131 KLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGY 190
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
+K+ + A +F+ + +D SW +MI+ S+ G+ E L F EM + G ++PN +
Sbjct: 191 SKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQG-FRPNSMTY 249
Query: 242 GSVFSACSNF----------------------------------------ARILFNEIDS 261
SV SAC++ AR +F+ +
Sbjct: 250 ASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTE 309
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
+ SW +LI GVA EA+ LF++MR+ + D T+ ++L C+ + + G Q+
Sbjct: 310 HNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQL 369
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA------------------LLVFKELG-- 361
H++ I G DS+VPV NA++TMYAKC + A + F + G
Sbjct: 370 HAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDV 429
Query: 362 ----------KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+ +SWNS++A +Q EE +++ +ML +K D ITF+ + AC
Sbjct: 430 EKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISAC 489
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
A +A L + Q+ K G + +V V N ++ +Y +CG + A+K+F+ + ++VSW+
Sbjct: 490 ADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWN 549
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
+++ GYAQ G G + +++F +M ++G P+ ++ V VL+ CSH G V EG + + M +
Sbjct: 550 AMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKD 609
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+GI P EH C+VDLL RAG + +A++ INQM + +W +LLA+
Sbjct: 610 HGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAA 657
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 224/477 (46%), Gaps = 41/477 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S L + E L + N R TYA ++SAC+S+ L+ G +H I+
Sbjct: 215 NTMISILSQHGFGAETLNTF-LEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIV 273
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ DV +++MY KCG LE AR FD + + N VSWT++I G +Q + +A+
Sbjct: 274 RMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALV 333
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ QM + V QFT +++ C + +G QLHAH I S + NAL+ MY
Sbjct: 334 LFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYA 393
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + A + F + +D+ SW +MI AFS+ G ++E
Sbjct: 394 KCGDVWKANHAFELMPIRDIISWTAMITAFSQAG-DVEK--------------------- 431
Query: 243 SVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
AR F+++ ++ SWN+++A E + ++ +M + D +T
Sbjct: 432 ---------AREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITF 482
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
+ + AC L G Q+ + K+GF SNV V N+++TMY++C + A +F +
Sbjct: 483 STSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVM 542
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
+ VSWN+++A Q+ Q ++ +F +ML PD I++ V+ C+ V++
Sbjct: 543 K-NLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSG---FVSE 598
Query: 423 LHCYITKTGLAFDVFVMNG----LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
Y + M+ ++D+ + G L A+ L N M P+ W +L+
Sbjct: 599 GQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALL 655
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 137/550 (24%), Positives = 231/550 (42%), Gaps = 113/550 (20%)
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
F +K C+ L S+ + R+LHA +I S + QN L+ MY+ I DA VF GI
Sbjct: 7 FYESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIM 66
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEM---------------LHHGAYQPN------ 237
+V SW +MI+ F+ G EA F +M H+G +
Sbjct: 67 FPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGS 126
Query: 238 ---------------EFIFG----------SVFSACS--NFARILFNEIDSPDLASWNAL 270
+F FG ++ C +FA+ +F +P L WN++
Sbjct: 127 LGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSM 186
Query: 271 IAGVASHSNANEAMSLFSEMRDRELL-------------------------------PDG 299
I G + + + +A+ LF++M +R+ + P+
Sbjct: 187 IYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNS 246
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+T S+L AC L G +H+ I++M +V ++ MYAKC L +A VF
Sbjct: 247 MTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDG 306
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
L ++ ++VSW S+I Q EE LF++M + D T V+G C + +
Sbjct: 307 LTEH-NAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISI 365
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG-------------------------- 453
QLH + GL V V N L+ +Y KCG +
Sbjct: 366 GEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQ 425
Query: 454 -----SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
AR+ F+ M +V+SW+S++ Y Q G +E LK++ +M GV + +T
Sbjct: 426 AGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTS 485
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
++AC+ + ++ G + E + G + VV + +R G + EA+ + +
Sbjct: 486 ISACADLAVLILGNQILAQAE-KLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMK- 543
Query: 569 DIVVWKSLLA 578
++V W +++A
Sbjct: 544 NLVSWNAMMA 553
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 197/606 (32%), Positives = 306/606 (50%), Gaps = 65/606 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S C++ ++ + LV + +T A L+ AC L L LG ++H +
Sbjct: 132 NALLSGYCQRGMFRD-LVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAV 190
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + DV + +++MYGKC SLEDA F M +RN VSW A+IAGC QN Q
Sbjct: 191 KTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQ------ 244
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
Y++ L+ ++ C + + RQLHAH IK++ S + A++ +Y
Sbjct: 245 -YMRGLE------------LLCRCKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYA 291
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K D ++DAR F G+ V + +M+ + G EA+ F M G FG
Sbjct: 292 KADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSG------IGFG 345
Query: 243 -----SVFSACSNF-------------------------ARILFNEIDSPDLASWNALIA 272
VFSAC+ A ++F E++ D SWN +IA
Sbjct: 346 VVSLSGVFSACAEVKGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIA 405
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
+ + + + +EM + D T S+L AC G +L G+ VH IK G
Sbjct: 406 ALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGL 465
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
+ V + ++ MY KC ++ AL + +G + VSWNSIIA + Q+EE + FS M
Sbjct: 466 DAFVSSTVVDMYCKCGMITEALKLHDRIGGQ-ELVSWNSIIAGFSLNKQSEEAQKFFSEM 524
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
L +KPDH T+ V+ +CA +A++E+ Q+H I K + D F+ + L+D+Y KCG++
Sbjct: 525 LDMGVKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNM 584
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
++ +F ++ D VSW+++I GYA G G EAL++F R + V+PN T V VL AC
Sbjct: 585 PDSQLMFEKVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVLRAC 644
Query: 513 SHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
SHVGL+++G + +M + Y + P EH +C+ EA FI M +AD V+
Sbjct: 645 SHVGLLDDGCRYFHLMTSRYKLEPQLEHFACMGP--------QEALKFIRSMPLEADAVI 696
Query: 573 WKSLLA 578
WK+LL+
Sbjct: 697 WKTLLS 702
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 175/597 (29%), Positives = 291/597 (48%), Gaps = 75/597 (12%)
Query: 36 STYAGLISACSSL--RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
+T++ + C+S +L G+ H +L+S P + + N +L MY +CG A F
Sbjct: 30 ATFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVF 89
Query: 94 DKMPQRN-------------------------------VVSWTAMIAGCSQNYQENDAIK 122
D MP R+ VVSW A+++G Q D +
Sbjct: 90 DTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVG 149
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L I+M + GV P + T ++KAC GL + LG Q+HA +K+ + A +AL+ MY
Sbjct: 150 LSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYG 209
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAF---SKLGYELEALCHFNEM--------LHH 231
K + DA + F G+ ++ SWG++IA + LE LC + LH
Sbjct: 210 KCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELLCRCKAITCLSTARQLHA 269
Query: 232 GAYQPNEF----IFGS----VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNAN 281
A + N+F + G+ V++ + AR F + + + + NA++ G+
Sbjct: 270 HAIK-NKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGA 328
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
EAM LF M + +++ + AC +K GFD +V V NAIL
Sbjct: 329 EAMQLFQFMTRSGIGFGVVSLSGVFSACAE--------------VK-GFDVDVCVRNAIL 373
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+Y KC L A LVF+E+ + DSVSWN+IIAA Q+ E+ + ML S ++ D
Sbjct: 374 DLYGKCKALVEAYLVFQEM-EQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADD 432
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
T+ V+ ACA + SLE +H K+GL D FV + ++D+Y KCG + A KL +
Sbjct: 433 FTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDR 492
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
+ ++VSW+S+I G++ +EA K F+ M +GV P+ T VL +C+++ +E G
Sbjct: 493 IGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELG 552
Query: 522 LHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
++ +I++ E ++ S +VD+ A+ G + +++ ++ D V W +++
Sbjct: 553 KQIHGQIIKQE--MLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQ-KLDFVSWNAMI 606
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 189/439 (43%), Gaps = 68/439 (15%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + L + L EA+ + F + I + +G+ SAC+ ++ +
Sbjct: 315 NAMMVGLVRTGLGAEAMQLFQF-MTRSGIGFGVVSLSGVFSACAEVKGFDV--------- 364
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
DV ++N IL++YGKC +L +A + F +M QR+ VSW +IA QN D I
Sbjct: 365 ------DVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIV 418
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ML+SG+ FT+GS++KAC+GL S+ G +H IKS G + ++ MY
Sbjct: 419 HLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYC 478
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I +A + I +++ SW S+IA FS EA F+EML G +P+ F +
Sbjct: 479 KCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGV-KPDHFTYA 537
Query: 243 SVFSACSNFARI----------------------------------------LFNEIDSP 262
+V +C+N A I +F ++
Sbjct: 538 TVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKL 597
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ-V 321
D SWNA+I G A H EA+ +F + + P+ T ++L AC L G +
Sbjct: 598 DFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGCRYF 657
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H + + + + C AL + + AD+V W ++++ C
Sbjct: 658 HLMTSRYKLEPQLE--------HFACMGPQEALKFIRSMPLEADAVIWKTLLSICKIRQD 709
Query: 382 AEELFRLFSRMLASQIKPD 400
E S +L ++ PD
Sbjct: 710 VEVAETAASNVL--RLDPD 726
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 302/581 (51%), Gaps = 42/581 (7%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A ++ AC+ +++ LG +VH + +V + ++N+Y K G +++A + F +P
Sbjct: 124 ASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPV 183
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
R V+W +I G +Q A++L+ +M GV P +F S + ACS LG + GRQ+
Sbjct: 184 RTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQI 243
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H + +S + N LI +Y K R+ AR +F + +++ SW +MI+ + + +
Sbjct: 244 HGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFN 303
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA-------------------------- 252
EA+ F M G +QP+ F S+ ++C + A
Sbjct: 304 AEAITMFWNMTQAG-WQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNA 362
Query: 253 --------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
R +F+ + D S+NA+I G + + + EA+++F MR L P
Sbjct: 363 LIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPS 422
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
LT SLL +L + Q+H IIK G ++ +A++ +Y+KCS++ +A VF
Sbjct: 423 LLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFN 482
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
L D V WNS+I Q+ Q EE +LF+++L S + P+ TF ++ + +AS+
Sbjct: 483 ML-HYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMF 541
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
Q H +I K G+ D V N L+D+Y KCG + R LF DV+ W+S+I YA
Sbjct: 542 HGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYA 601
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
Q G +EAL++F M V PN VT VGVL+AC+H G V EGL+ + M++ Y I P
Sbjct: 602 QHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGI 661
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH + VV+L R+G +H A++FI +M VW+SLL++
Sbjct: 662 EHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSA 702
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/574 (27%), Positives = 293/574 (51%), Gaps = 49/574 (8%)
Query: 49 RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMI 108
R +L +H ++ D+ L N +L Y G L DAR FD+MP RN+VSW ++I
Sbjct: 32 RLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVI 91
Query: 109 AGCSQNYQENDAIKLYIQMLQSGV-MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
+ +Q+ +++ AI L++ ++ +P +F S+++AC+ +V LG Q+H +K +
Sbjct: 92 SMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDL 151
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
+++ ALI +Y K + +A VF + + +W ++I ++++G AL F+
Sbjct: 152 DANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDR 211
Query: 228 MLHHGAYQPNEFIFGSVFSACSNF------------------------------------ 251
M G +P+ F+ S SACS
Sbjct: 212 MGIEGV-RPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCS 270
Query: 252 ----ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC 307
AR LF+ ++ +L SW +I+G +S EA+++F M PDG S+L
Sbjct: 271 RLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILN 330
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
+C ++QG Q+H+++IK +++ V NA++ MYAKC L A VF L ++ D++
Sbjct: 331 SCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAED-DAI 389
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
S+N++I ++ E +F RM ++P +TF ++G + ++E+ Q+H I
Sbjct: 390 SYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLI 449
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K+G + D++ + L+D+Y KC + A+ +FN + D+V W+S+I G+AQ G+EA+
Sbjct: 450 IKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAI 509
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVV 545
KLF ++ G++PN T V ++T S + + G H + I + G+ + ++
Sbjct: 510 KLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWII---KAGVDNDPHVSNALI 566
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
D+ A+ G + E + + C D++ W S++ +
Sbjct: 567 DMYAKCGFIKEGR-MLFESTCGEDVICWNSMITT 599
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 149/493 (30%), Positives = 245/493 (49%), Gaps = 46/493 (9%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP + A +SACS+L L+ GR++H + S + D + N ++++Y KC L AR
Sbjct: 217 VRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAAR 276
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD M RN+VSWT MI+G QN +AI ++ M Q+G P F SI+ +C L
Sbjct: 277 KLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLA 336
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ GRQ+HAHVIK++ + +NALI MY K + + +AR VF +A D S+ +MI
Sbjct: 337 AIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIE 396
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS--------------------------- 243
+SK EA+ F M + +P+ F S
Sbjct: 397 GYSKNRDLAEAVNIFQRM-RFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTS 455
Query: 244 -----------VFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
V+S CS N A+ +FN + D+ WN++I G A + EA+ LF+++
Sbjct: 456 LDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQL 515
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ P+ T +L+ +++ G Q H++IIK G D++ V NA++ MYAKC +
Sbjct: 516 LLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFI 575
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
++F E D + WNS+I QH AEE ++F M ++++P+++TF V+ A
Sbjct: 576 KEGRMLF-ESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSA 634
Query: 411 CAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVV 468
CA + E + + + + + +++++ + G L +A++ M P
Sbjct: 635 CAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAA 694
Query: 469 SWSSLILGYAQFG 481
W SL+ FG
Sbjct: 695 VWRSLLSACHLFG 707
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 198/421 (47%), Gaps = 58/421 (13%)
Query: 12 QNLYN-EALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQP 68
QN +N EA+ + N T +P +A ++++C SL ++ GR++H H++ + +
Sbjct: 299 QNSFNAEAITMF---WNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEA 355
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D ++N +++MY KC L +AR FD + + + +S+ AMI G S+N +A+ ++ +M
Sbjct: 356 DEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMR 415
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
+ P TF S++ S ++ L +Q+H +IKS L A +ALI +Y+K +
Sbjct: 416 FFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVN 475
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
DA+ VF+ + KD+ W SMI ++ EA+ FN++L G PNEF F ++ +
Sbjct: 476 DAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSG-MAPNEFTFVALVTVA 534
Query: 249 SNFA----------------------------------------RILFNEIDSPDLASWN 268
S A R+LF D+ WN
Sbjct: 535 STLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWN 594
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC-----IGR-LTLYQGMQVH 322
++I A H +A EA+ +F M + E+ P+ +T +L AC +G L + M+
Sbjct: 595 SMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMK-S 653
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+Y I+ G + V N ++ + L A + + + W S+++AC A
Sbjct: 654 NYDIEPGIEHYASVVN----LFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNA 709
Query: 383 E 383
E
Sbjct: 710 E 710
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 185/619 (29%), Positives = 325/619 (52%), Gaps = 44/619 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +SS + L +E Y + + R ST+A ++SA +S+ + G+++H +
Sbjct: 296 NAVISSYSQSGLESEVFGLYKDMKRQGLMPTR-STFASMLSAAASMTAFDEGQQIHAAAV 354
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+V + + ++N+Y K G + DA+ FD ++N+V W AM+ G QN + + I+
Sbjct: 355 KHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQ 414
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ M ++ + FTF S++ AC L S+ +GRQ+H IK+ + L NA++ MY+
Sbjct: 415 MFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYS 474
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I A+ +FS I KD SW ++I + E EA+ M +G P+E F
Sbjct: 475 KLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYG-IAPDEVSFA 533
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
+ +ACSN +R + +D+
Sbjct: 534 TAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDAS 593
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+ NALI G+ ++ +EA+ LF ++ P T S+L C G ++ G QVH
Sbjct: 594 SMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVH 653
Query: 323 SYIIKMGF-DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
SY +K + + + +++ +Y KC +L +A + E+ + + V W + I+ Q+
Sbjct: 654 SYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGY 713
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+++ +F RM + ++ D TF V+ AC+++A+L ++H I K+G +
Sbjct: 714 SDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASA 773
Query: 442 LMDIYIKCGSLGSARKLFNFMENP-DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
LMD+Y KCG + S+ ++F ++N +++ W+S+I+G+A+ G +EAL LF +M+ + P
Sbjct: 774 LMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKP 833
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ VTL+GVL ACSH GL+ EG +L+ M YGI+P +H +C++DLL R G + EA++
Sbjct: 834 DEVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEV 893
Query: 561 INQMACDADIVVWKSLLAS 579
I+Q+ AD V+W + LA+
Sbjct: 894 IDQLPFRADGVIWATFLAA 912
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 134/436 (30%), Positives = 230/436 (52%), Gaps = 8/436 (1%)
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G P QF ++ ACS LG++ GRQ+H V+KS S Q L+ MY K + DA
Sbjct: 155 GGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDA 214
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
R VF GIA D W SMIA + ++G +AL F+ M G+ P++ + ++ S ++
Sbjct: 215 RRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGS-APDQVTYVTIISTLAS 273
Query: 251 F-----ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
AR L I P +WNA+I+ + +E L+ +M+ + L+P T S+
Sbjct: 274 MGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASM 333
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
L A +G Q+H+ +K G D+NV V ++++ +Y K + +A VF + +
Sbjct: 334 LSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVF-DFSTEKN 392
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
V WN+++ +Q++ EE ++F M + ++ D TF V+GAC + SL++ Q+HC
Sbjct: 393 IVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHC 452
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
K + D+FV N ++D+Y K G++ A+ LF+ + D VSW++LI+G A +E
Sbjct: 453 ITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEE 512
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
A+ + RM+ G++P+ V+ + ACS++ E G ++ +Y + S ++
Sbjct: 513 AVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIH-CASIKYNVCSNHAVGSSLI 571
Query: 546 DLLARAGCVHEAEDFI 561
DL ++ G V + +
Sbjct: 572 DLYSKFGDVESSRKVL 587
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/484 (28%), Positives = 242/484 (50%), Gaps = 15/484 (3%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A ++SACS L +L+ GR+VH +L S Q +++MY KC ++DAR FD +
Sbjct: 164 AVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIAC 223
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+ + W +MIAG + + A+ L+ +M + G P Q T+ +II + +G + R L
Sbjct: 224 PDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASMGRLSDARTL 283
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV----TSWGSMIAAFSK 214
+K +A NA+I+ Y++ + ++ + R+ + +++ SM++A +
Sbjct: 284 ----LKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAAS 339
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFS-----ACSNFARILFNEIDSPDLASWNA 269
+ E + HG N F+ S+ + C + A+ +F+ ++ WNA
Sbjct: 340 MTAFDEGQQIHAAAVKHG-LDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNA 398
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
++ G + E + +F MR +L D T S+L ACI +L G QVH IK
Sbjct: 399 MLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNS 458
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
D+++ V NA+L MY+K + A +F L DSVSWN++I + + EE +
Sbjct: 459 MDADLFVANAMLDMYSKLGAIDVAKALF-SLIPGKDSVSWNALIVGLAHNEEEEEAVYML 517
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
RM I PD ++F + AC+ + + E Q+HC K + + V + L+D+Y K
Sbjct: 518 KRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKF 577
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
G + S+RK+ ++ +V ++LI G Q DEA++LF ++ G P+ T +L
Sbjct: 578 GDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASIL 637
Query: 510 TACS 513
+ C+
Sbjct: 638 SGCT 641
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 190/396 (47%), Gaps = 53/396 (13%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++A I+ACS++R+ + G+++H + + + + ++++Y K G +E +R +
Sbjct: 531 SFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHV 590
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++V A+I G QN +E++AI+L+ Q+L+ G P FTF SI+ C+G S +G+
Sbjct: 591 DASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGK 650
Query: 157 QLHAHVIKSEHGSHLIAQN-----ALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIA 210
Q+H++ +KS L+ Q+ +L+ +Y K + DA + + + K++ W + I+
Sbjct: 651 QVHSYTLKSA----LLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATIS 706
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------- 254
+++ GY ++L F M H + +E F SV ACS A +
Sbjct: 707 GYAQNGYSDQSLVMFWRMRSHDV-RSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFV 765
Query: 255 ------------------------LFNEI-DSPDLASWNALIAGVASHSNANEAMSLFSE 289
+F E+ + ++ WN++I G A + ANEA+ LF +
Sbjct: 766 SYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQK 825
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCS 348
M++ +L PD +T+ +L AC + +G + + ++ G V ++ + +
Sbjct: 826 MQESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGG 885
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
L A V +L AD V W + +AAC H E
Sbjct: 886 HLQEAQEVIDQLPFRADGVIWATFLAACQMHKDEER 921
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 84/160 (52%), Gaps = 7/160 (4%)
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA-RKLFNFMENPDVVSWSSLILG-YAQF 480
LH + + GL + + L+D+Y + G +G A R L P + +S +L +A+
Sbjct: 78 LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137
Query: 481 GCGDEALKLFTRMR-SLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTR 538
G + L F R+R S+G +P+ L VL+ACS +G +E+G ++ ++++ G +
Sbjct: 138 GSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKS--GFCSSA 195
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +VD+ A+ V +A + +AC D + W S++A
Sbjct: 196 FCQAGLVDMYAKCVEVKDARRVFDGIAC-PDTICWASMIA 234
>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
gi|194688792|gb|ACF78480.1| unknown [Zea mays]
Length = 706
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 187/596 (31%), Positives = 325/596 (54%), Gaps = 28/596 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N ++++ + EAL Y Q + P+ T A ++SAC ++ +L GR+ H
Sbjct: 10 NTVIAAVARSGSPGEALEMY---QGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGL 66
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ ++N +L MY KCGS+ DA FD MP N VS+TAM+ G +Q +DA
Sbjct: 67 AVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDA 126
Query: 121 IKLYIQMLQSGVMPGQFTFGSII----KACSGLGSVC----LGRQLHAHVIKSEHGSHLI 172
++L+ +M ++G+ S++ +AC+G +V L + +HA V++ GS
Sbjct: 127 LRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQH 186
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG-YE--LEALCHFNEML 229
N+L+ +Y K ++ +A VF ++ + SW +I + +LG YE +E L E +
Sbjct: 187 VGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVL----EFM 242
Query: 230 HHGAYQPNEFIFGSVFSACSNF-----ARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
++PNE + ++ ++C AR +F++I P + +WN L++G E +
Sbjct: 243 QESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETI 302
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTM 343
LF M+ + + PD T+ +L +C RL ++ G QVHS +++ +++ V + ++ +
Sbjct: 303 DLFRRMQHQNVQPDRTTLAVILSSC-SRLGNFELGKQVHSASVRLLLHNDMFVASGLIDI 361
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
Y+KC + AL++F + + D V WNS+I+ H+ +EE F +M + + P +
Sbjct: 362 YSKCGQVGIALIIFNMMTER-DVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESS 420
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
+ ++ CA+++S+ Q+H + K G +V+V L+D+Y K G++ AR FN M
Sbjct: 421 YASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMI 480
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
++V+W+ +I GYAQ G G++A++LF M + P+ VT + VLT CSH GLV+E +
Sbjct: 481 VKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVT 540
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ME+ YGI P EH +C++D LARA E E I +M D ++W+ LLA+
Sbjct: 541 FFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVLLAA 596
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 244/502 (48%), Gaps = 31/502 (6%)
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP RN VSW +IA +++ +A+++Y MLQ G+ P FT S++ AC + ++ G
Sbjct: 1 MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R+ H +K H +N L+ MYTK + DA +F G+ + S+ +M+ ++
Sbjct: 61 RRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQG 120
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------NFAR----------ILFNE 258
G +AL F M G + + SV AC+ N AR ++ +
Sbjct: 121 GAVDDALRLFARMSRTG-IRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRK 179
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ- 317
D N+L+ A +EA+ +F + ++ ++L G+L Y+
Sbjct: 180 GFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVS-----WNILITGYGQLGCYER 234
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
M+V ++ + GF+ N + +L K + +A +F ++ K + +WN++++
Sbjct: 235 AMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPS-VTTWNTLLSGYG 293
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
Q +E LF RM ++PD T ++ +C+++ + E+ Q+H + L D+F
Sbjct: 294 QEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMF 353
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
V +GL+DIY KCG +G A +FN M DVV W+S+I G A +EA +MR G
Sbjct: 354 VASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENG 413
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSC-VVDLLARAGCVH 555
+ P + ++ C+ + + +G ++ +++++ Y + C ++D+ A++G +
Sbjct: 414 MFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGY---DQNVYVGCSLIDMYAKSGNMD 470
Query: 556 EAEDFINQMACDADIVVWKSLL 577
+A F N M ++V W ++
Sbjct: 471 DARLFFNCMIVK-NLVAWNEMI 491
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 169/401 (42%), Gaps = 59/401 (14%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
LI+ L + +V + + S +P+ V +++L K + AR FDK+P+ +
Sbjct: 222 LITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPS 281
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
V +W +++G Q + I L+ +M V P + T I+ +CS LG+ LG+Q+H+
Sbjct: 282 VTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHS 341
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
++ + + + LI +Y+K ++ A +F+ + +DV W SMI+ + E
Sbjct: 342 ASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEE 401
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------------- 251
A +M +G + P E + S+ + C+
Sbjct: 402 AFDFLKQMRENGMF-PTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLI 460
Query: 252 -----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
AR+ FN + +L +WN +I G A + +A+ LF M + PD +
Sbjct: 461 DMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSV 520
Query: 301 TVHSLLCACIGR------LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
T ++L C +T + M+ + I + V ++ A+ +
Sbjct: 521 TFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPL-----VEHYTCLIDALARAARFAEVE 575
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAE-------ELFRL 388
V ++ D + W ++AAC+ H+ AE LFRL
Sbjct: 576 AVIGKMPYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRL 616
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 180/552 (32%), Positives = 281/552 (50%), Gaps = 43/552 (7%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
Q D+ N L K G L +AR FDKM Q++ +SWT +I+G ++A+ L+
Sbjct: 46 QTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKN 105
Query: 127 M-LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M ++SG+ F KAC V G LH + +K+ + + +AL+ MYTK
Sbjct: 106 MRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNG 165
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+I + R VF + ++V SW ++I + GY EAL +F+EM + + + F
Sbjct: 166 KIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWR-SRVEYDSYTFAIAL 224
Query: 246 SACS-----NFAR-----------------------------------ILFNEIDSPDLA 265
AC+ N+ R LF ++ D+
Sbjct: 225 KACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVV 284
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW +I + A+ F MR+ ++ P+ T +++ C + G Q+H+ I
Sbjct: 285 SWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALI 344
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
+ +G +++ V N+I+TMYAKC L ++ ++F E+ + D VSW++IIA Q E
Sbjct: 345 LHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRR-DIVSWSTIIAGYXQGGHVSEA 403
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
F L S M KP V+ AC MA LE QLH Y+ GL V++ L+++
Sbjct: 404 FELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINM 463
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y KCGS+ A ++F+ EN D+VSW+++I GYA+ G E + LF ++ +G+ P+ VT
Sbjct: 464 YCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTF 523
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
+GVL+ACSH GLV+ G H + M +Y I P++EH C++DLL RAG + +AE I M
Sbjct: 524 IGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMP 583
Query: 566 CDADIVVWKSLL 577
D VVW +LL
Sbjct: 584 FHRDDVVWSTLL 595
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 142/538 (26%), Positives = 242/538 (44%), Gaps = 46/538 (8%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S N +EAL+ + + + +RI P + AC + G +H + + +
Sbjct: 87 ISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTG 146
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
V + + +L+MY K G + + R F +MP RNVVSWTA+I G + +A+ +
Sbjct: 147 LVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFS 206
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M +S V +TF +KAC+ G++ GR++HA +K N L MY K
Sbjct: 207 EMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCG 266
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
++ +F ++ +DV SW ++I ++G E A+ F M PNE+ F +V
Sbjct: 267 KLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRM-RESDVSPNEYTFAAVI 325
Query: 246 SACSNFARI----------------------------------------LFNEIDSPDLA 265
S C+N ARI +F+E+ D+
Sbjct: 326 SGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIV 385
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW+ +IAG + +EA L S MR P + S+L AC L G Q+H+Y+
Sbjct: 386 SWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYV 445
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
+ +G + V +A++ MY KC + A +F + +N D VSW ++I +H + E+
Sbjct: 446 LSIGLEHTAMVLSALINMYCKCGSIEEASRIF-DAAENDDIVSWTAMINGYAEHGYSREV 504
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG-LMD 444
LF ++ ++PD +TF V+ AC+ +++ ++K G ++D
Sbjct: 505 IDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMID 564
Query: 445 IYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
+ + G L A + M + D V WS+L+ G + + T R L + PN
Sbjct: 565 LLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRR--TAERILQLEPN 620
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 201/455 (44%), Gaps = 70/455 (15%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
YN+ + Y + + T+A + AC+ +L GR++H + + N
Sbjct: 197 YNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVAN 256
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
+ MY KCG LE F+KM R+VVSWT +I Q QE A++ +I+M +S V P
Sbjct: 257 TLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSP 316
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
++TF ++I C+ L + G QLHA ++ + L +N+++ MY K ++ + +F
Sbjct: 317 NEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIF 376
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
+ R+D+ SW ++IA + + G+ EA + M G +P EF SV SAC N A +
Sbjct: 377 HEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGP-KPTEFALASVLSACGNMAIL 435
Query: 255 ----------------------------------------LFNEIDSPDLASWNALIAGV 274
+F+ ++ D+ SW A+I G
Sbjct: 436 EHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGY 495
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF---- 330
A H + E + LF ++ L PD +T +L AC H+ ++ +GF
Sbjct: 496 AEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSAC-----------SHAGLVDLGFHYFN 544
Query: 331 --------DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ ++ + + L +A + + + + D V W++++ AC H
Sbjct: 545 AMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDV 604
Query: 383 EELFRLFSRMLASQIKPD----HITFNDVMGACAK 413
E R R+L Q++P+ HIT ++ + K
Sbjct: 605 ERGRRTAERIL--QLEPNCAGTHITLANIYASKGK 637
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 164/332 (49%), Gaps = 12/332 (3%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC---- 307
AR +F+++ D SW LI+G + ++++EA+ LF MR + GL + +
Sbjct: 68 ARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR----VESGLRIDPFILSLAH 123
Query: 308 -ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
AC + G +H Y +K G ++V V +A+L MY K + VF E+ +
Sbjct: 124 KACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR-NV 182
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
VSW +II ++ +E FS M S+++ D TF + ACA +L ++H
Sbjct: 183 VSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQ 242
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
K G FV N L +Y KCG L LF M DVVSW+++I Q G + A
Sbjct: 243 AMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECA 302
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
++ F RMR VSPN T V++ C+++ +E G L+ ++ + G+ + + ++
Sbjct: 303 VQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILH-LGLAASLSVENSIMT 361
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ A+ G + + ++M DIV W +++A
Sbjct: 362 MYAKCGQLTSSSVIFHEMT-RRDIVSWSTIIA 392
>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 831
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 186/594 (31%), Positives = 314/594 (52%), Gaps = 19/594 (3%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++++ K +AL YD +++ T+A + SAC L+ + GR+ H +L
Sbjct: 106 NTIITTMVKNGYERQALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVL 165
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ + N +L MY KCG EDA F+ + + N V++T M+ G SQ Q + ++
Sbjct: 166 KVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLE 225
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACS------------GLGSVCLGRQLHAHVIKSEHGSH 170
L+ ML+ G+ + +I+ C+ GL + G+Q+H +K
Sbjct: 226 LFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERD 285
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
L N+L+ MY K + A NVF + + V SW MI+ + +AL F M
Sbjct: 286 LHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQC 345
Query: 231 HGAYQPNEFIFGSVFSACSN-----FARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
G Y+P++ + ++ +AC R +F+ + SP L SWNA+++G ++ EA+
Sbjct: 346 CG-YEPDDVTYINMLTACVKSGDVKVGRQIFDCMSSPSLISWNAILSGYNQSADHGEAVE 404
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
LF +M+ + PD T+ +L +C L G QVH+ K+GF +V V ++++ +Y+
Sbjct: 405 LFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYS 464
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
KC + + VF +L + D V WNS+IA ++ ++ F RM P +F
Sbjct: 465 KCGKMEVSKHVFSKLSE-LDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFA 523
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
+ +CAK++SL Q+H I K G +VFV + L+++Y KCG +G+AR F+ M
Sbjct: 524 TIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGK 583
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
++V+W+ +I GYA G G EA+ L+ M S G P+ +T V VLTACSH LV+EG+ ++
Sbjct: 584 NIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIF 643
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M ++ ++P +H +C++D L R G +E E ++ M D +VW+ +L+S
Sbjct: 644 SSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSS 697
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 139/580 (23%), Positives = 252/580 (43%), Gaps = 120/580 (20%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ ++ L+ +C + +SL + +H I D L NH++++Y KC + A
Sbjct: 1 MEVKSLNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAH 60
Query: 91 MGFDK-------------------------------MPQRNVVSWTAMIAGCSQNYQEND 119
FDK MP+RN VS +I +N E
Sbjct: 61 HVFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQ 120
Query: 120 AIKLY-IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
A+ Y + M+ V P TF ++ AC GL V GR+ H V+K S++ NAL+
Sbjct: 121 ALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALL 180
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
MYTK DA VF GI + ++ +M+ S+ E L F ML G
Sbjct: 181 CMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKG------ 234
Query: 239 FIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
C +DS L++ + A S +++
Sbjct: 235 --------IC----------VDSVSLSTILVICAKGVSFGVCDDSR-------------- 262
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
GL+ ++ QG Q+H+ +K GF+ ++ +CN++L MYAK + +A VF+
Sbjct: 263 GLSTNA------------QGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFE 310
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
L K++ VSWN +I+ +E+ F RM +PD +T+ +++ AC
Sbjct: 311 NLDKHS-VVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTAC------- 362
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
+K G + R++F+ M +P ++SW++++ GY
Sbjct: 363 ----------------------------VKSGDVKVGRQIFDCMSSPSLISWNAILSGYN 394
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
Q EA++LF +M+ +P+ TL +L++C+ +GL+E G ++ + + + G
Sbjct: 395 QSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQ-KLGFYDDV 453
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
S ++++ ++ G + ++ ++++ + D+V W S++A
Sbjct: 454 YVASSLINVYSKCGKMEVSKHVFSKLS-ELDVVCWNSMIA 492
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 308/594 (51%), Gaps = 59/594 (9%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKC----------QPDVVLQNHILNMYGKCGSLEDAR 90
L+ +C +SL G+ +H H+L KC DV + ++++Y C L+ AR
Sbjct: 15 LLESCIQSKSLFRGKLIHQHLL--KCLHRTHETNLTNFDVPFEK-LVDLYIACSELKIAR 71
Query: 91 MGFDKMPQR--NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
FDKMP R NVV W +I + N +AI LY +ML G+ P +FTF ++KACS
Sbjct: 72 HVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSA 131
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
L GR++H + + S++ AL+ Y K + DA+ VF + ++DV +W SM
Sbjct: 132 LKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSM 191
Query: 209 IAAFS--KLGYE-----------------------LEALCHFNEMLH----HGAYQPNEF 239
I+ FS + Y+ L A+ N + H HG F
Sbjct: 192 ISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGF 251
Query: 240 IFGSVFSA----------CSNFARILFNEID-SPDLASWNALIAGVASHSNANEAMSLFS 288
+ V C ++AR +F+ + + +W+A++ EA+ LF
Sbjct: 252 VGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFC 311
Query: 289 EM---RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
++ +D ++ +T+ +++ C L G +H Y IK GF ++ V N +L+MYA
Sbjct: 312 QLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYA 371
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
KC ++ A+ F E+ D+VS+ +II+ +Q+ +EE R+F M S I P+ T
Sbjct: 372 KCGIINGAMRFFNEMDLR-DAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLA 430
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
V+ ACA +A L + HCY G D + N L+D+Y KCG + +ARK+F+ M
Sbjct: 431 SVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKR 490
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
+VSW+++I+ Y G G EAL LF M+S G+ P+ VT + +++ACSH GLV EG + +
Sbjct: 491 GIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWF 550
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M ++GIIP EH +C+VDLL+RAG E FI +M + D+ VW +LL++
Sbjct: 551 NAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSA 604
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 169/405 (41%), Gaps = 80/405 (19%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
Y+E VA Q ++ ST G++ A + + SL+ G+++H + DVV+
Sbjct: 202 YDE--VARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGT 259
Query: 75 HILNMYGKCGSLEDARMGFDKMP-QRNVVSWTAMIAGCSQNYQENDAIKLYIQML---QS 130
IL++YGKC ++ AR FD M +N V+W+AM+ +A++L+ Q+L
Sbjct: 260 GILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDD 319
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
++ T ++I+ C+ L + G LH + IKS L+ N L++MY K I A
Sbjct: 320 VIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGA 379
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
F+ + +D S+ ++I+ + + G E L F EM G P + SV AC++
Sbjct: 380 MRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGI-NPEKATLASVLPACAH 438
Query: 251 F----------------------------------------ARILFNEIDSPDLASWNAL 270
AR +F+ + + SWN +
Sbjct: 439 LAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTM 498
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC--------------------- 309
I H EA+ LF M+ L PD +T L+ AC
Sbjct: 499 IIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFG 558
Query: 310 -IGRLTLYQGM-----------QVHSYIIKMGFDSNVPVCNAILT 342
I R+ Y M +VHS+I KM + +V V A+L+
Sbjct: 559 IIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLS 603
>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
Length = 807
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 185/596 (31%), Positives = 323/596 (54%), Gaps = 28/596 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N ++++ + EAL Y Q + P+ T A ++SAC ++ +L GR+ H
Sbjct: 111 NTVIAAVARSGSPGEALEMY---QGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGL 167
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ ++N +L MY KCGS+ DA FD MP N VS+TAM+ G +Q +DA
Sbjct: 168 AVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDA 227
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGL--------GSVCLGRQLHAHVIKSEHGSHLI 172
++L+ +M ++G+ S++ AC+ ++ L + +HA V++ GS
Sbjct: 228 LRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQH 287
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG-YE--LEALCHFNEML 229
N+L+ +Y K ++ +A VF ++ + SW +I + +LG YE +E L E +
Sbjct: 288 VGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVL----EFM 343
Query: 230 HHGAYQPNEFIFGSVFSACSNF-----ARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
++PNE + ++ ++C AR +F++I P + +WN L++G E +
Sbjct: 344 QESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETI 403
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTM 343
LF M+ + + PD T+ +L +C RL ++ G QVHS +++ +++ V + ++ +
Sbjct: 404 DLFRRMQHQNVQPDRTTLAVILSSC-SRLGNFELGKQVHSASVRLLLHNDMFVASGLIDI 462
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
Y+KC + AL++F + + D V WNS+I+ H+ +EE F +M + + P +
Sbjct: 463 YSKCGQVGIALIIFNMMTER-DVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESS 521
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
+ ++ CA+++S+ Q+H + K G +V+V L+D+Y K G++ AR FN M
Sbjct: 522 YASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMI 581
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
++V+W+ +I GYAQ G G++A++LF M + P+ VT + VLT CSH GLV+E +
Sbjct: 582 VKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVT 641
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ME+ YGI P EH +C++D LARA E E I +M D ++W+ LLA+
Sbjct: 642 FFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVLLAA 697
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 256/531 (48%), Gaps = 31/531 (5%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
P+V N ++ + G L AR +MP RN VSW +IA +++ +A+++Y
Sbjct: 73 HPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQG 132
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
MLQ G+ P FT S++ AC + ++ GR+ H +K H +N L+ MYTK
Sbjct: 133 MLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGS 192
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+ DA +F G+ + S+ +M+ ++ G +AL F M G + + SV
Sbjct: 193 VADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTG-IRVDPVAVSSVLG 251
Query: 247 ACS-------NFAR----------ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
AC+ N AR ++ + D N+L+ A +EA+ +F
Sbjct: 252 ACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFES 311
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+ ++ ++L G+L Y+ M+V ++ + GF+ N + +L K
Sbjct: 312 LSSVSIVS-----WNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKAR 366
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ +A +F ++ K + +WN++++ Q +E LF RM ++PD T ++
Sbjct: 367 DVPSARAMFDKIPKPS-VTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVIL 425
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
+C+++ + E+ Q+H + L D+FV +GL+DIY KCG +G A +FN M DVV
Sbjct: 426 SSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVV 485
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RI 527
W+S+I G A +EA +MR G+ P + ++ C+ + + +G ++ ++
Sbjct: 486 CWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQV 545
Query: 528 MENEYGIIPTREHCSC-VVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+++ Y + C ++D+ A++G + +A F N M ++V W ++
Sbjct: 546 LKDGY---DQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVK-NLVAWNEMI 592
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 160/331 (48%), Gaps = 10/331 (3%)
Query: 190 ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
AR + +G+A D ++ +S G AL F + H Y N I + +
Sbjct: 34 ARVLAAGLA-ADTFLLNRLVELYSLSGLPCHALRAFRALPHPNVYSYNAAISAACRAGDL 92
Query: 250 NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
AR L + + SWN +IA VA + EA+ ++ M L P T+ S+L AC
Sbjct: 93 AAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSAC 152
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSW 369
L G + H +K+G D + V N +L MY KC + +A+ +F + + + VS+
Sbjct: 153 GAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGM-PSPNEVSF 211
Query: 370 NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK--------MASLEMVT 421
+++ Q ++ RLF+RM + I+ D + + V+GACA+ ++++
Sbjct: 212 TAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQ 271
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
+H + + G D V N L+D+Y K + A K+F + + +VSW+ LI GY Q G
Sbjct: 272 SIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLG 331
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
C + A+++ M+ G PN VT +L +C
Sbjct: 332 CYERAMEVLEFMQESGFEPNEVTYSNMLASC 362
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 169/401 (42%), Gaps = 59/401 (14%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
LI+ L + +V + + S +P+ V +++L K + AR FDK+P+ +
Sbjct: 323 LITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPS 382
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
V +W +++G Q + I L+ +M V P + T I+ +CS LG+ LG+Q+H+
Sbjct: 383 VTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHS 442
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
++ + + + LI +Y+K ++ A +F+ + +DV W SMI+ + E
Sbjct: 443 ASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEE 502
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------------- 251
A +M +G + P E + S+ + C+
Sbjct: 503 AFDFLKQMRENGMF-PTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLI 561
Query: 252 -----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
AR+ FN + +L +WN +I G A + +A+ LF M + PD +
Sbjct: 562 DMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSV 621
Query: 301 TVHSLLCACIGR------LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
T ++L C +T + M+ + I + V ++ A+ +
Sbjct: 622 TFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPL-----VEHYTCLIDALARAARFAEVE 676
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAE-------ELFRL 388
V ++ D + W ++AAC+ H+ AE LFRL
Sbjct: 677 AVIGKMPYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRL 717
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 44/165 (26%)
Query: 424 HCYITKTGLAFDVFVMNGLMDIY-------------------------------IKCGSL 452
H + GLA D F++N L+++Y + G L
Sbjct: 33 HARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPHPNVYSYNAAISAACRAGDL 92
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
+AR L M + + VSW+++I A+ G EAL+++ M G++P TL VL+AC
Sbjct: 93 AAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSAC 152
Query: 513 SHVGLVEE-----------GLHLYRIMENEYGIIPTREHCSCVVD 546
V +++ GL ++ +EN G++ C V D
Sbjct: 153 GAVAALDDGRRCHGLAVKVGLDGHQFVEN--GLLGMYTKCGSVAD 195
>gi|302785790|ref|XP_002974666.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
gi|300157561|gb|EFJ24186.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
Length = 921
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 179/591 (30%), Positives = 298/591 (50%), Gaps = 56/591 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T++ +++ACS+L + G+ + D I + D VLQ+ IL+++ +CGSL R FD+M
Sbjct: 303 TFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRM 362
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P R VV+WT MIA +Q +A++LY M + P ++++ACS L ++ GR
Sbjct: 363 PHRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQGR 419
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H+ + + L+ Q L+ MY K + +AR F G +DV SW S+I A+S
Sbjct: 420 AVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHEN 479
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------------- 249
+ EAL F+ M G +PN F +V ACS
Sbjct: 480 FGREALEVFHSMELEGV-EPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVG 538
Query: 250 -------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+FAR++F+ I SW ++ + + +++EA+ ++S +
Sbjct: 539 NALVSMYSKFGRVDFARVVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFR 598
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P + L +C + + +H I F ++ + N ++ +YAKC L A LV
Sbjct: 599 PGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARLV 658
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F ++ + + VSW ++I Q+ + E L+ M ++P+ I F V+ +CA + +
Sbjct: 659 FDQMTEK-NEVSWTTMIGGYAQNGRPAEALELYKAM---DVQPNFIAFVPVISSCADLGA 714
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L ++H ++ GL + ++ L+++Y KCG LG AR+ F+ PD +W+S+
Sbjct: 715 LVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATA 774
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
YAQFG G + L+L+ M GV PN +TL+ VL ACSH+G++EE H + M ++GI P
Sbjct: 775 YAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGMLEECEHRFECMVADHGIAP 834
Query: 537 TREHCSCVVDLLARAGCVHEAEDFI--------NQMACDADIVVWKSLLAS 579
T EH SC+ DLL R+G + EAE + ++ A + W S L +
Sbjct: 835 TSEHYSCMTDLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFLGA 885
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 158/530 (29%), Positives = 257/530 (48%), Gaps = 48/530 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+A ++SAC+ L+ ++ G+KVH I S + D VLQN +LN+Y KCG LE++R F+ M
Sbjct: 1 TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R V +W MI Q+ +A++ + +M P TF S++ AC + G+
Sbjct: 61 ERRTVATWNTMITAYVQHDFFQEALEAFRRM---DAPPSSITFTSVLGACCSPDDLETGK 117
Query: 157 QLHAHVIKS--EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
+H + S + + I QN+L+ MY K + DA VF GI RK+ SW +MI A+++
Sbjct: 118 AIHRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQ 177
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------------- 254
GYE A+ F +M+ G +P+ + V +ACS +
Sbjct: 178 NGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSKGVESAMV 237
Query: 255 -------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+F + D+ W A IA H + A+ LF +M L
Sbjct: 238 STGLIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEGL 297
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
+ +T +L AC G + I +G + + + + IL+++A+C L
Sbjct: 298 QANNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTRE 357
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F + + V+W ++IAA Q + E L+ M I+PD I ++V+ AC+++
Sbjct: 358 MFDRM-PHRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLK 413
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+LE +H I + V L+D+Y+KCG L AR+ F+ + DV+SW+SLI
Sbjct: 414 NLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLIT 473
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
Y+ G EAL++F M GV PN +T V+ ACS + + G L+
Sbjct: 474 AYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALH 523
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 157/606 (25%), Positives = 291/606 (48%), Gaps = 52/606 (8%)
Query: 12 QNLYNE-ALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
QN Y A+ + + + P TYAG+++ACS+L L+ G ++H ++ SK
Sbjct: 177 QNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIH-ALIRSKGVESA 235
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
++ ++++YGK G EDA F+ + R+VV WTA IA C + Q A++L+ +M
Sbjct: 236 MVSTGLIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAE 295
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G+ TF I+ ACS L G+ + + + Q+ +++++ + ++
Sbjct: 296 GLQANNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGT 355
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
R +F + + V +W +MIAA+++ GY +EAL E+ H +P++ +V ACS
Sbjct: 356 REMFDRMPHRTVVTWTTMIAAYNQRGYSMEAL----ELYHCMDIEPDDIALSNVLQACSR 411
Query: 251 F----------------------------------------ARILFNEIDSPDLASWNAL 270
AR F+ + D+ SW +L
Sbjct: 412 LKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSL 471
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I + + EA+ +F M + P+ +T +++ AC +L G +HS ++ G
Sbjct: 472 ITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGH 531
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
S+ V NA+++MY+K + A +VF + SW ++ A Q+ + E ++S
Sbjct: 532 ISDEFVGNALVSMYSKFGRVDFARVVFDSIPVKR-YPSWRVMLVALTQNGHSHEALEMYS 590
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
R+ +P F+ + +C + + +H I + D+ + N LM++Y KCG
Sbjct: 591 RIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCG 650
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
L AR +F+ M + VSW+++I GYAQ G EAL+L+ +++ V PN + V V++
Sbjct: 651 ELEEARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELY---KAMDVQPNFIAFVPVIS 707
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
+C+ +G + EG ++ + ++ G+ + +V++ A+ G + A +F + C D
Sbjct: 708 SCADLGALVEGQRVHARL-SDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYC-PDA 765
Query: 571 VVWKSL 576
W S+
Sbjct: 766 GAWNSM 771
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 188/440 (42%), Gaps = 63/440 (14%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+++ +N EAL + S + T+ +I ACS L SL GR +H ++ +
Sbjct: 472 ITAYSHENFGREALEVF-HSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATG 530
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
D + N +++MY K G ++ AR+ FD +P + SW M+ +QN ++A+++Y
Sbjct: 531 HISDEFVGNALVSMYSKFGRVDFARVVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYS 590
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
++ G PG F + + +C+ L V R +H + S+ L+ N L+ +Y K
Sbjct: 591 RIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCG 650
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ +AR VF + K+ SW +MI +++ G EAL + M QPN F V
Sbjct: 651 ELEEARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAM----DVQPNFIAFVPVI 706
Query: 246 SACSN----------------------------------------FARILFNEIDSPDLA 265
S+C++ AR F+ PD
Sbjct: 707 SSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAG 766
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC--IGRLTLYQGMQVHS 323
+WN++ A + ++ + L+ EM + + P+G+T+ S+L AC +G L + +
Sbjct: 767 AWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGMLEECE-HRFEC 825
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK----ELGKNADSV----SWNSIIAA 375
+ G + + + + L A V K E G A S +W S + A
Sbjct: 826 MVADHGIAPTSEHYSCMTDLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFLGA 885
Query: 376 CLQHNQ-------AEELFRL 388
C HN AE+L+ L
Sbjct: 886 CKTHNDWGRAAGAAEKLYEL 905
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 148/285 (51%), Gaps = 16/285 (5%)
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
T +L AC G + +G +VH I + + + NA+L +YAKC L + +F+ +
Sbjct: 1 TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
+ +WN++I A +QH+ +E F RM A P ITF V+GAC LE
Sbjct: 61 ERRT-VATWNTMITAYVQHDFFQEALEAFRRMDA---PPSSITFTSVLGACCSPDDLETG 116
Query: 421 TQLHCYI--TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
+H I + + D + N L+ +Y KCGSL A ++F+ + + SW+++I YA
Sbjct: 117 KAIHRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYA 176
Query: 479 QFGCGDEALKLFTRMRSLG-VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN---EYGI 534
Q G A+++F M S G V P+ +T GVLTACS +G +E G+ ++ ++ + E +
Sbjct: 177 QNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSKGVESAM 236
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ T ++DL + G +A + D D+V+W + +A+
Sbjct: 237 VST-----GLIDLYGKWGFFEDALQVFESVR-DRDVVIWTAFIAA 275
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 177/545 (32%), Positives = 287/545 (52%), Gaps = 34/545 (6%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA-----RMGFDK 95
++S +S + K + LS +PD V N I++ Y + G E+A MG K
Sbjct: 262 MVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLK 321
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ NVVSWTA+IAG QN + +A+ ++ +M+ GV P T S + AC+ L + G
Sbjct: 322 DFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHG 381
Query: 156 RQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
R++H + IK E S L+ N+L+ Y K + AR F I + D+ SW +M+A ++
Sbjct: 382 REIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYAL 441
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGV 274
G EA+ +EM G PD+ +WN L+ G
Sbjct: 442 RGSHEEAIELLSEMKFQGI---------------------------EPDIITWNGLVTGF 474
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+ + A+ F M + P+ T+ L AC L G ++H Y+++ + +
Sbjct: 475 TQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELST 534
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V +A+++MY+ C L A VF EL D V WNSII+AC Q ++ L M
Sbjct: 535 GVGSALISMYSGCDSLEVACSVFSELSTR-DVVVWNSIISACAQSGRSVNALDLLREMNL 593
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
S ++ + +T + AC+K+A+L ++H +I + GL F++N L+D+Y +CGS+
Sbjct: 594 SNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQK 653
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
+R++F+ M D+VSW+ +I Y G G +A+ LF + R++G+ PN +T +L+ACSH
Sbjct: 654 SRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSH 713
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
GL+EEG +++M+ EY + P E +C+VDLL+RAG +E +FI +M + + VW
Sbjct: 714 SGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWG 773
Query: 575 SLLAS 579
SLL +
Sbjct: 774 SLLGA 778
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 160/587 (27%), Positives = 279/587 (47%), Gaps = 50/587 (8%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
YA ++ C L +L+LG +VH ++++ L + +L +Y + G +EDAR FDKM
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+RNV SWTA++ + IKL+ M+ GV P F F + KACS L + +G+
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
++ +++ + + +++ M+ K R+ AR F I KDV W M++ ++ G
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEID-----SPDLASW 267
+AL ++M G +P++ + ++ S + + F E+ P++ SW
Sbjct: 272 FKKALKCISDMKLSGV-KPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
ALIAG + EA+S+F +M + P+ +T+ S + AC L G ++H Y IK
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIK 390
Query: 328 M-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+ DS++ V N+++ YAKC + A F + K D VSWN+++A EE
Sbjct: 391 VEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMI-KQTDLVSWNAMLAGYALRGSHEEAI 449
Query: 387 RLFSRMLASQIKPDHITFNDV-----------------------------------MGAC 411
L S M I+PD IT+N + + AC
Sbjct: 450 ELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAAC 509
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
++ +L++ ++H Y+ + + V + L+ +Y C SL A +F+ + DVV W+
Sbjct: 510 GQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWN 569
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
S+I AQ G AL L M V N VT+V L ACS + + +G +++ +
Sbjct: 570 SIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI-IR 628
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G+ + ++D+ R G + ++ + M D+V W +++
Sbjct: 629 CGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMIS 674
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 156/307 (50%), Gaps = 16/307 (5%)
Query: 15 YNEALVAYDFSQNNTNIRIRP--STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
Y + A +F Q ++ + P +T +G ++AC +R+L+LG+++H ++L + + +
Sbjct: 477 YGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGV 536
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
+ +++MY C SLE A F ++ R+VV W ++I+ C+Q+ + +A+ L +M S V
Sbjct: 537 GSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNV 596
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
T S + ACS L ++ G+++H +I+ + N+LI MY + I +R
Sbjct: 597 EVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRR 656
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-- 250
+F + ++D+ SW MI+ + G+ ++A+ F + G +PN F ++ SACS+
Sbjct: 657 IFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMG-LKPNHITFTNLLSACSHSG 715
Query: 251 -------FARILFNEID-SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
+ +++ E P + + ++ ++ NE + +M P+
Sbjct: 716 LIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKM---PFEPNAAVW 772
Query: 303 HSLLCAC 309
SLL AC
Sbjct: 773 GSLLGAC 779
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 198/608 (32%), Positives = 310/608 (50%), Gaps = 62/608 (10%)
Query: 30 NIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
+ +RP+ +A L++ACS L +L GR++H I + + VL N +++MY KCGSL
Sbjct: 134 RMEVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLI 193
Query: 88 DARMGFDKMP---QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP-GQFTFGSII 143
DA+ FD++P +R+VV+W AMI+ +N +A++L+ M + G P TF S++
Sbjct: 194 DAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVL 253
Query: 144 KAC--SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
+C +GL S+ R +H ++ + + AL+ Y K + DA VF ++
Sbjct: 254 DSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEE 313
Query: 202 ----VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------ 251
+ + +MI+A + G+ E+L F M G +P+ SV +ACS
Sbjct: 314 PSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGT-KPSGVTLVSVLNACSMLQVGSAT 372
Query: 252 -----------------------------------ARILFNEIDSPDLASWNALIAGVAS 276
AR F+ I SPD+ SWNA+ A
Sbjct: 373 AFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQ 432
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG---RLTLYQGMQVHSYIIKMGFDSN 333
H + EA+ LF M + P T + L AC + G ++ S + + G + +
Sbjct: 433 HHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGD 492
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGK-NADSVSWNSIIAACLQHNQAEELFRLFSRM 392
V NA L MYAKC L +A VF+ + D ++WNS++AA H +E F LF M
Sbjct: 493 TAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAM 552
Query: 393 LASQ-IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
A + +KP+ +TF V+ A S+ ++H + G D + N L+++Y KCGS
Sbjct: 553 EAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGS 612
Query: 452 LGSARKLFNFMEN--PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
L A+ +F+ + DV++W+SLI GYAQ+G + ALKLF M+ GV PN VT + L
Sbjct: 613 LDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISAL 672
Query: 510 TACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
TAC+H G +E+G L M ++GI+P +H SC+VDLL R G + EAE + + + AD
Sbjct: 673 TACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QAD 731
Query: 570 IVVWKSLL 577
++ W +LL
Sbjct: 732 VITWMALL 739
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/529 (27%), Positives = 242/529 (45%), Gaps = 60/529 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISAC--SSLRSLQLGRKVHDH 60
N +S+ + EAL + + T+ ++ +C + L SL+ R +H
Sbjct: 214 NAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGR 273
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF----DKMPQRNVVSWTAMIAGCSQNYQ 116
I+ + + + ++ +++ YGK GSL+DA F D+ P ++V+ +AMI+ C QN
Sbjct: 274 IVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGW 333
Query: 117 ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL--GSVCLGRQLHAHVIKSEHGSHLIAQ 174
++++L+ M G P T S++ ACS L GS A + S +++
Sbjct: 334 PQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLG- 392
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
L+ Y + + + AR F I DV SW +M AA+ + EAL F ML G
Sbjct: 393 TTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGV- 451
Query: 235 QPNEFIFGSVFSACSNF------------------------------------------- 251
+P+ F + +AC+ +
Sbjct: 452 RPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLAD 511
Query: 252 ARILFNEIDSP---DLASWNALIAGVASHSNANEAMSLFSEMRDRELL-PDGLTVHSLLC 307
AR +F I SP D +WN+++A H EA LF M +L+ P+ +T ++L
Sbjct: 512 ARAVFERI-SPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLD 570
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN-ADS 366
A R ++ QG ++H+ ++ GF+S+ + NA+L MYAKC L +A +F + N D
Sbjct: 571 ASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDV 630
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
++W S+IA Q+ QAE +LF M ++P+H+TF + AC LE +L
Sbjct: 631 IAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSG 690
Query: 427 ITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+T G+ + ++D+ +CG L A KL DV++W +L+
Sbjct: 691 MTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALL 739
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 148/564 (26%), Positives = 253/564 (44%), Gaps = 90/564 (15%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH------ILNMYGKCGSLED 88
PSTY L+ AC LR+L+ G+++H HIL + + L NH ++ M+ KCG+L +
Sbjct: 43 PSTYGCLLQACGRLRALKQGQRLHAHILSRR----IDLHNHSFLASDLIVMHAKCGNLAE 98
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A D+ +V S TAMI ++ + + A++L+ +M V P +++ ACS
Sbjct: 99 AEALADRFA--SVYSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSC 153
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
LG++ GR++H+ + + + + NAL
Sbjct: 154 LGNLAAGRRIHSQISDRDFEENSVLGNAL------------------------------- 182
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWN 268
I+ +SK G ++A F+ + D+ +WN
Sbjct: 183 ISMYSKCGSLIDAKQAFDRL----------------------------PRASKRDVVTWN 214
Query: 269 ALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACI--GRLTLYQGMQVHSYI 325
A+I+ + +A EA+ LF +M RD P+ +T S+L +C+ G L+L +H I
Sbjct: 215 AMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRI 274
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS---VSWNSIIAACLQHNQA 382
+ G + V A++ Y K L +A VF G S V+ +++I+AC Q+
Sbjct: 275 VGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWP 334
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKM----ASLEMVTQLHCYITKTGLAFDVFV 438
+E RLF M KP +T V+ AC+ + A+ ++ Q ++ T D +
Sbjct: 335 QESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSAT---RDNVL 391
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
L+ Y + L AR F+ +++PDVVSW+++ Y Q EAL LF RM GV
Sbjct: 392 GTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGV 451
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIME--NEYGIIPTREHCSCVVDLLARAGCVHE 556
P++ T + LTAC+ RI E G+ + +++ A+ G + +
Sbjct: 452 RPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLAD 511
Query: 557 AEDFINQMA-CDADIVVWKSLLAS 579
A +++ D + W S+LA+
Sbjct: 512 ARAVFERISPARRDCITWNSMLAA 535
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 191/445 (42%), Gaps = 58/445 (13%)
Query: 8 SLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRK----VHDHILL 63
S C QN + + + F+ N + T +++ACS L Q+G + + +
Sbjct: 326 SACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSML---QVGSATAFVLEQAMEV 382
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
D VL +L Y + L AR FD + +VVSW AM A Q+++ +A+ L
Sbjct: 383 VSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVL 442
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGL---GSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ +ML GV P TF + + AC+ + +G+++ + + ++ NA + M
Sbjct: 443 FERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNM 502
Query: 181 YTKFDRILDARNVFSGI--ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
Y K + DAR VF I AR+D +W SM+AA+ G EA F M +PN+
Sbjct: 503 YAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNK 562
Query: 239 FIFGSVFSACSN----------FARILFNEIDS--------------------------- 261
F +V A ++ AR++ N +S
Sbjct: 563 VTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDK 622
Query: 262 -----PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
D+ +W +LIAG A + A A+ LF M+ + + P+ +T S L AC L
Sbjct: 623 SSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLE 682
Query: 317 QGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
QG ++ S + G + I+ + +C L A + E AD ++W +++ A
Sbjct: 683 QGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLL-ERTSQADVITWMALLDA 741
Query: 376 CLQHNQAEELFRLFSRMLASQIKPD 400
C + E R R++ Q+ P+
Sbjct: 742 CKNSKELERGERCAERIM--QLDPE 764
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 117/227 (51%), Gaps = 16/227 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +++ L EA + + ++ T+ ++ A +S S+ GR++H ++
Sbjct: 530 NSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVV 589
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP--QRNVVSWTAMIAGCSQNYQENDA 120
+ + D V+QN +LNMY KCGSL+DA+ FDK Q +V++WT++IAG +Q Q A
Sbjct: 590 SNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERA 649
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL-------HAHVIKSEHGSHLIA 173
+KL+ M Q GV P TF S + AC+ G + G +L H + S+H S
Sbjct: 650 LKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFS---- 705
Query: 174 QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
++ + + R+ +A + ++ DV +W +++ A K ELE
Sbjct: 706 --CIVDLLGRCGRLDEAEKLLERTSQADVITWMALLDA-CKNSKELE 749
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 108/211 (51%), Gaps = 18/211 (8%)
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI--TKTGLAF 434
+Q E+L SR++A Q T+ ++ AC ++ +L+ +LH +I + L
Sbjct: 19 IQRLGVEDLTAAVSRIIADQGHCAPSTYGCLLQACGRLRALKQGQRLHAHILSRRIDLHN 78
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
F+ + L+ ++ KCG+L A L + + V S +++I + + G D+A++LF RM
Sbjct: 79 HSFLASDLIVMHAKCGNLAEAEALADRFAS--VYSCTAMIRAWMEHGRPDKAMELFDRME 136
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN----EYGIIPTREHCSCVVDLLAR 550
V PN L+ ++ ACS +G + G ++ + + E ++ + ++ + ++
Sbjct: 137 ---VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLG-----NALISMYSK 188
Query: 551 AGCVHEAEDFINQM--ACDADIVVWKSLLAS 579
G + +A+ +++ A D+V W +++++
Sbjct: 189 CGSLIDAKQAFDRLPRASKRDVVTWNAMISA 219
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 181/610 (29%), Positives = 315/610 (51%), Gaps = 43/610 (7%)
Query: 11 KQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
+ LY++A+ + +T T+ +I AC+ LG +H ++ DV
Sbjct: 7 RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV 66
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML-- 128
+ N ++ MYGK G ++ A F MP RN+VSW ++I+G S+N D + ++M+
Sbjct: 67 FVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAG 126
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
+ G++P T +++ C+ V +G ++H +K + N+L+ MY+K +
Sbjct: 127 EEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLT 186
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
+A+ +F RK+ SW +MI GY EA F EM + NE ++ AC
Sbjct: 187 EAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPAC 246
Query: 249 SNFARI----------------------------------------LFNEIDSPDLASWN 268
+++ +F +++ + SWN
Sbjct: 247 LEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWN 306
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
ALI G A + + +A++L+ +M L+PD T+ SLL A +L G +VH ++++
Sbjct: 307 ALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRH 366
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
G + + + ++L++Y C +A L+F + + + SVSWN++I+ Q+ E+ L
Sbjct: 367 GLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKS-SVSWNAMISGYSQNGLPEDALIL 425
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
F ++++ +P I V+GAC++ ++L + + HCY K L DVFV +D+Y K
Sbjct: 426 FRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAK 485
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
G + +R +F+ ++N D+ SW+++I Y G G+E+++LF RMR +G P+ T +G+
Sbjct: 486 SGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGI 545
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
LT CSH GLVEEGL + M+N +GI P EH +CV+D+L RAG + +A +++M
Sbjct: 546 LTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQP 605
Query: 569 DIVVWKSLLA 578
D VW SLL+
Sbjct: 606 DSRVWSSLLS 615
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 146/516 (28%), Positives = 247/516 (47%), Gaps = 58/516 (11%)
Query: 113 QNYQENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL 171
+N +DAI ++++++ + FTF +IKAC+G LG +H VIK +
Sbjct: 7 RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV 66
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH- 230
NALIAMY KF + A VF + +++ SW S+I+ FS+ G+ + EM+
Sbjct: 67 FVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAG 126
Query: 231 HGAYQPNEFIFGSVFSACS----------------------------------------N 250
P+ +V C+
Sbjct: 127 EEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLT 186
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP-DGLTVHSLLCAC 309
A++LF++ + + SWN +I G+ + EA +LF EM+ +E + + +TV ++L AC
Sbjct: 187 EAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPAC 246
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSW 369
+ L ++H Y I+ GF + V N + YAKC +L A VF + + SW
Sbjct: 247 LEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSM-ETKTVNSW 305
Query: 370 NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
N++I C Q+ + L+ +M S + PD T ++ A A + SL ++H ++ +
Sbjct: 306 NALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLR 365
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
GL D F+ L+ +YI CG SAR LF+ ME VSW+++I GY+Q G ++AL L
Sbjct: 366 HGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALIL 425
Query: 490 FTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYR----IMENEYGIIPTREHCSC 543
F ++ S G P+ + +V VL ACS + G H Y +ME+ + T
Sbjct: 426 FRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACST------ 479
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+D+ A++GC+ E+ + + + D+ W +++A+
Sbjct: 480 -IDMYAKSGCIKESRSVFDGLK-NKDLASWNAIIAA 513
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 221/490 (45%), Gaps = 47/490 (9%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T ++ C+ +Q+G ++H + DV + N +++MY KCG L +A+M FDK
Sbjct: 135 ATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDK 194
Query: 96 MPQRNVVSWTAMIAG-CSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGLGSVC 153
++N VSW MI G C++ Y +A L+ +M +Q + + T +I+ AC + +
Sbjct: 195 NNRKNAVSWNTMIGGLCTKGYI-FEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLR 253
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
++LH + I+ + N +A Y K ++ A VF + K V SW ++I +
Sbjct: 254 SLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCA 313
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------- 251
+ G +AL + +M + G P+ F GS+ A ++
Sbjct: 314 QNGDPRKALNLYIQMTYSGLV-PDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDS 372
Query: 252 ------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
AR+LF+ ++ SWNA+I+G + + +A+ LF ++
Sbjct: 373 FIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSD 432
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
P + V S+L AC + L G + H Y +K +V V + + MYAK + +
Sbjct: 433 GFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKES 492
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
VF L KN D SWN+IIAA H EE LF RM PD TF ++ C+
Sbjct: 493 RSVFDGL-KNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSH 551
Query: 414 MASLEMVTQLHCYITK-TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM-ENPDVVSWS 471
+E + + G+ + +MD+ + G L A +L + M E PD WS
Sbjct: 552 AGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWS 611
Query: 472 SLILGYAQFG 481
SL+ FG
Sbjct: 612 SLLSFCRNFG 621
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 216/478 (45%), Gaps = 51/478 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + LC + EA + Q +I + T ++ AC + L+ +++H + +
Sbjct: 204 NTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSI 263
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
Q D ++ N + Y KCG L A F M + V SW A+I GC+QN A+
Sbjct: 264 RHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALN 323
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL--IAQNALIAM 180
LYIQM SG++P FT GS++ A + L S+ G+++H V++ HG + +L+++
Sbjct: 324 LYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLR--HGLEIDSFIGISLLSL 381
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y AR +F G+ K SW +MI+ +S+ G +AL F +++ G +QP++
Sbjct: 382 YIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDG-FQPSDIA 440
Query: 241 FGSVFSACS----------------------------------------NFARILFNEID 260
SV ACS +R +F+ +
Sbjct: 441 VVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLK 500
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ DLASWNA+IA H + E++ LF MR +PDG T +L C + +G++
Sbjct: 501 NKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLK 560
Query: 321 VHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+ + G + + ++ M + L +AL + E+ + DS W+S+++ C
Sbjct: 561 YFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNF 620
Query: 380 NQAEELFRLFSRMLASQIK--PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
+ E + ++L + K ++++ +++ + + V Q+ I GL D
Sbjct: 621 GELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQM---IKDIGLQKD 675
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 136/262 (51%), Gaps = 9/262 (3%)
Query: 274 VASHSNA--NEAMSLFSEM-RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
VA H N ++A+ +F ++ D E D T ++ AC G L G +H +IKMG
Sbjct: 3 VAVHRNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGL 62
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+V V NA++ MY K + A+ VF + + VSWNSII+ ++ +++ F +
Sbjct: 63 LLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVR-NLVSWNSIISGFSENGFSKDCFDMLV 121
Query: 391 RMLASQ--IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
M+A + + PD T V+ CA+ ++M ++H K GL+ DV V N L+D+Y K
Sbjct: 122 EMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSK 181
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR-SLGVSPNLVTLVG 507
CG L A+ LF+ + VSW+++I G G EA LF M+ + N VT++
Sbjct: 182 CGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLN 241
Query: 508 VLTACSHVGLVE--EGLHLYRI 527
+L AC + + + LH Y I
Sbjct: 242 ILPACLEISQLRSLKELHGYSI 263
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 179/559 (32%), Positives = 309/559 (55%), Gaps = 21/559 (3%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T A ++SAC ++ +L GR+ H + + ++N +L MY KCGS+ DA FD M
Sbjct: 144 TLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWM 203
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII----KACSGLGSV 152
N VS+TAM+ G +Q+ +DA++L+ +M +S + S++ +AC+G +V
Sbjct: 204 SSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNV 263
Query: 153 C----LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
L + +HA V++ S N+LI MY K ++ +A VF ++ + SW +
Sbjct: 264 ARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNIL 323
Query: 209 IAAFSKLG-YE--LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-----ARILFNEID 260
+ + +LG YE LE L +++ ++PNE + ++ ++C AR +F++I
Sbjct: 324 VTGYGQLGCYERALEVL----DLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIS 379
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
P + +WN L++G + + LF M+ + + PD T+ +L C L G Q
Sbjct: 380 KPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQ 439
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
VHS +K+ +++ V + ++ MY+KC + A ++F + + D V WNS+I+ H+
Sbjct: 440 VHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTER-DVVCWNSMISGLAIHS 498
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
EE F F +M + + P ++ ++ +CA+++S+ Q+H + K G +V+V +
Sbjct: 499 LNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGS 558
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+D+Y KCG++ AR FN M ++V+W+ +I GYAQ G G++A++LF M + P
Sbjct: 559 SLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKP 618
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ VT + VLT CSH GLV+E + + ME+ YGI P EH +C++D L RAG E
Sbjct: 619 DSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAV 678
Query: 561 INQMACDADIVVWKSLLAS 579
I++M D ++W+ LLA+
Sbjct: 679 IDKMPYKDDAILWEVLLAA 697
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/531 (26%), Positives = 257/531 (48%), Gaps = 31/531 (5%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
+P+V N ++ + G L AR +MP RN VSW +IA +++ +A+++Y
Sbjct: 73 RPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRG 132
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
MLQ G+ P FT S++ AC + ++ GR+ H +K + +N L+ MYTK
Sbjct: 133 MLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGS 192
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+ DA +F ++ + S+ +M+ ++ G +AL F M A + + SV
Sbjct: 193 VADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARM-SRSAIRVDPVAVSSVLG 251
Query: 247 ACS-------NFAR-----------ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
AC+ N AR ++ DS D N+LI A +EAM +F
Sbjct: 252 ACAQACAGDYNVARAIRLAQSIHALVVRKGFDS-DQHVGNSLIDMYAKGMKMDEAMKVFE 310
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
M ++ ++L G+L Y+ ++V + + GF+ N + +L K
Sbjct: 311 SMSSVSIVS-----WNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKA 365
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
+ +A +F ++ K + +WN++++ Q ++ LF RM ++PD T +
Sbjct: 366 RDVPSARAMFDKISKPS-VTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVI 424
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
+ C+++ LE+ Q+H K L D+FV +GL+D+Y KCG +G A+ +FN M DV
Sbjct: 425 LSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDV 484
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-R 526
V W+S+I G A +EA F +MR G+ P + ++ +C+ + + +G ++ +
Sbjct: 485 VCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQ 544
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
++++ Y S ++D+ A+ G + +A F N M +IV W ++
Sbjct: 545 VLKDGYD--QNVYVGSSLIDMYAKCGNMDDARLFFNCMIVK-NIVAWNEMI 592
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 150/313 (47%), Gaps = 9/313 (2%)
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASW 267
++ +S G AL F + Y N I + + AR L + + SW
Sbjct: 51 LVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSW 110
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
N +IA VA + EA+ ++ M L P T+ S+L AC L G + H +K
Sbjct: 111 NTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVK 170
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
+G D N V N +L MY KC + +A+ +F + + + VS+ +++ Q ++ R
Sbjct: 171 VGLDGNQFVENGLLGMYTKCGSVADAVRLFDWM-SSPNEVSFTAMMGGLAQSGAVDDALR 229
Query: 388 LFSRMLASQIKPDHITFNDVMGACAK--------MASLEMVTQLHCYITKTGLAFDVFVM 439
LF+RM S I+ D + + V+GACA+ ++ + +H + + G D V
Sbjct: 230 LFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVG 289
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
N L+D+Y K + A K+F M + +VSW+ L+ GY Q GC + AL++ M+ G
Sbjct: 290 NSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFE 349
Query: 500 PNLVTLVGVLTAC 512
PN VT +L +C
Sbjct: 350 PNEVTYSNMLASC 362
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 168/318 (52%), Gaps = 15/318 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S ++ L+ + + + Q+ N++ +T A ++S CS L L+LG++VH +
Sbjct: 387 NTLLSGYGQEELHQDTIELFRRMQHQ-NVQPDRTTLAVILSTCSRLGILELGKQVHSASV 445
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
D+ + + +++MY KCG + A++ F+ M +R+VV W +MI+G + + +A
Sbjct: 446 KLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFD 505
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ QM ++G+ P + ++ S+I +C+ L S+ GRQ+HA V+K + ++ ++LI MY
Sbjct: 506 FFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYA 565
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + DAR F+ + K++ +W MI +++ G+ +A+ F ML +P+ F
Sbjct: 566 KCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTT-KQKPDSVTFI 624
Query: 243 SVFSACSNFARI-----LFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEMRD 292
+V + CS+ + FN ++S P + + LI + E +++ +M
Sbjct: 625 AVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPY 684
Query: 293 RELLPDGLTVHSLLCACI 310
++ D + LL AC+
Sbjct: 685 KD---DAILWEVLLAACV 699
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 171/400 (42%), Gaps = 57/400 (14%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L++ L + +V D + S +P+ V +++L K + AR FDK+ + +
Sbjct: 323 LVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPS 382
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
V +W +++G Q D I+L+ +M V P + T I+ CS LG + LG+Q+H+
Sbjct: 383 VTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHS 442
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+K + + + LI MY+K ++ A+ +F+ + +DV W SMI+ + E
Sbjct: 443 ASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEE 502
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------------- 251
A F +M +G + P E + S+ ++C+
Sbjct: 503 AFDFFKQMRENGMF-PTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLI 561
Query: 252 -----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
AR+ FN + ++ +WN +I G A + +A+ LF M + PD +
Sbjct: 562 DMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSV 621
Query: 301 TVHSLLCAC-----IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
T ++L C + Y +Y I+ + + +A+ + +
Sbjct: 622 TFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDAL----GRAGRFAEVVA 677
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAE-------ELFRL 388
V ++ D++ W ++AAC+ H+ AE LFRL
Sbjct: 678 VIDKMPYKDDAILWEVLLAACVVHHNAELGEFAAKHLFRL 717
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 31/126 (24%)
Query: 427 ITKTGLAFDVFVMNGLMDIY-------------------------------IKCGSLGSA 455
+ GLA D F++N L+++Y + G L +A
Sbjct: 36 VLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAA 95
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
R L M + + VSW+++I A+ EAL+++ M G++P TL VL+AC V
Sbjct: 96 RDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAV 155
Query: 516 GLVEEG 521
+++G
Sbjct: 156 AALDDG 161
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 196/607 (32%), Positives = 310/607 (51%), Gaps = 62/607 (10%)
Query: 31 IRIRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
+ +RP+ +A L++ACS L +L GR++H I + + VL N +++MY KCGSL D
Sbjct: 1 MEVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLID 60
Query: 89 ARMGFDKMP---QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP-GQFTFGSIIK 144
A+ FD++P +R+VV+W AMI+ +N +A++L+ M G P TF S++
Sbjct: 61 AKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLD 120
Query: 145 AC--SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD- 201
+C +GL S+ R +H ++ + + AL+ Y K + DA VF + ++
Sbjct: 121 SCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEP 180
Query: 202 ---VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------- 249
+ + +MI+A + G+ E+L F M G +P+ SV +ACS
Sbjct: 181 STSLVTCSAMISACWQNGWPQESLRLFYAMNLEGT-KPSGVTLVSVLNACSMLPVGSATA 239
Query: 250 --------------------------------NFARILFNEIDSPDLASWNALIAGVASH 277
+ AR F+ I SPD+ SWNA+ A H
Sbjct: 240 FVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQH 299
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG---RLTLYQGMQVHSYIIKMGFDSNV 334
EA+ LF M + P T + L AC + G ++ S + + G + +
Sbjct: 300 HRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDT 359
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNA-DSVSWNSIIAACLQHNQAEELFRLFSRML 393
V NA L MYAKC L +A VF+ + D ++WNS++AA H +E F LF M
Sbjct: 360 AVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAME 419
Query: 394 ASQ-IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
A + +KP+ +TF V+ A S+ ++H + G D + N L+++Y KCGSL
Sbjct: 420 AEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSL 479
Query: 453 GSARKLFNFMEN--PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
A+ +F+ + DV++W+SL+ GYAQ+G + ALKLF M+ GV PN +T + LT
Sbjct: 480 DDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALT 539
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
AC+H G +E+G L M ++GI+P +H SC+VDLL R G + EAE + + + AD+
Sbjct: 540 ACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADV 598
Query: 571 VVWKSLL 577
+ W +LL
Sbjct: 599 ITWMALL 605
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/529 (27%), Positives = 243/529 (45%), Gaps = 60/529 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISAC--SSLRSLQLGRKVHDH 60
N +S+ + EAL + ++ T+ ++ +C + L SL+ R +H
Sbjct: 80 NAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGR 139
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF----DKMPQRNVVSWTAMIAGCSQNYQ 116
I+ + + + ++ +++ YGK GSL+DA F D+ P ++V+ +AMI+ C QN
Sbjct: 140 IVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGW 199
Query: 117 ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL--GSVCLGRQLHAHVIKSEHGSHLIAQ 174
++++L+ M G P T S++ ACS L GS A + S +++
Sbjct: 200 PQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSATRDNVLG- 258
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
L+ Y + + + AR F I DV SW +M AA+ + EAL F ML G
Sbjct: 259 TTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGV- 317
Query: 235 QPNEFIFGSVFSACSNF------------------------------------------- 251
+P+ F + +AC+ +
Sbjct: 318 RPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLAD 377
Query: 252 ARILFNEIDSP---DLASWNALIAGVASHSNANEAMSLFSEMRDRELL-PDGLTVHSLLC 307
AR +F I SP D +WN+++A H EA LF M +L+ P+ +T ++L
Sbjct: 378 ARAVFERI-SPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLD 436
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN-ADS 366
A R ++ QG ++H+ ++ GF+S+ + NA+L MYAKC L +A +F + N D
Sbjct: 437 ASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDV 496
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
++W S++A Q+ QAE +LF M ++P+HITF + AC LE +L
Sbjct: 497 IAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSG 556
Query: 427 ITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+T G+ + ++D+ +CG L A KL DV++W +L+
Sbjct: 557 MTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALL 605
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 164/351 (46%), Gaps = 18/351 (5%)
Query: 242 GSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGL 300
GS+ A F R+ D+ +WNA+I+ + +A EA+ LF +M D P+ +
Sbjct: 56 GSLIDAKQAFDRL--PRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSV 113
Query: 301 TVHSLLCACI--GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
T S+L +C+ G L+L +H I+ G + V A++ Y K L +A VF
Sbjct: 114 TFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFL 173
Query: 359 ELGKNADS---VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM- 414
S V+ +++I+AC Q+ +E RLF M KP +T V+ AC+ +
Sbjct: 174 RKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLP 233
Query: 415 ---ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
A+ ++ Q ++ T D + L+ Y + L AR F+ +++PDVVSW+
Sbjct: 234 VGSATAFVLEQAMEVVSAT---RDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWN 290
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME-- 529
++ Y Q EAL LF RM GV P++ T + LTAC+ RI
Sbjct: 291 AMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLL 350
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA-CDADIVVWKSLLAS 579
E G+ + +++ A+ G + +A +++ D + W S+LA+
Sbjct: 351 EEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAA 401
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 191/445 (42%), Gaps = 58/445 (13%)
Query: 8 SLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL-LSKC 66
S C QN + + + ++ N + T +++ACS L V + + +
Sbjct: 192 SACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSA 251
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
D VL +L Y + L AR FD + +VVSW AM A Q+++ +A+ L+ +
Sbjct: 252 TRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFER 311
Query: 127 MLQSGVMPGQFTFGSIIKACSGLG---SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
ML GV P TF + + AC+ + +G+++ + + ++ NA + MY K
Sbjct: 312 MLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAK 371
Query: 184 FDRILDARNVFSGIA--RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
+ DAR VF I+ R+D +W SM+AA+ G EA F M +PN+ F
Sbjct: 372 CGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTF 431
Query: 242 GSVFSACSN----------FARILFNEIDS------------------------------ 261
+V A ++ AR++ N +S
Sbjct: 432 VAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSS 491
Query: 262 --PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
D+ +W +L+AG A + A A+ LF M+ + + P+ +T S L AC L QG
Sbjct: 492 NQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGC 551
Query: 320 QVHSYIIKMGFDSN-VPVC---NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
++ S M D VP + I+ + +C L A + E AD ++W +++ A
Sbjct: 552 ELLS---GMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLL-ERTSQADVITWMALLDA 607
Query: 376 CLQHNQAEELFRLFSRMLASQIKPD 400
C + E R R++ Q+ P+
Sbjct: 608 CKNSKELERGERCAERIM--QLDPE 630
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 147/285 (51%), Gaps = 18/285 (6%)
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA-- 364
C+C+G L G ++HS I F+ N + NA+++MY+KC L +A F L + +
Sbjct: 17 CSCLGNLA--AGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKR 74
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRM-LASQIKPDHITFNDVMGAC--AKMASLEMVT 421
D V+WN++I+A L++ A E +LF M P+ +TF V+ +C A + SLE V
Sbjct: 75 DVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVR 134
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF--NFMENP--DVVSWSSLILGY 477
+H I G+ + FV L+D Y K GSL A ++F E P +V+ S++I
Sbjct: 135 AIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISAC 194
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII-P 536
Q G E+L+LF M G P+ VTLV VL ACS ++ G ++E ++
Sbjct: 195 WQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACS---MLPVGSATAFVLEQAMEVVSA 251
Query: 537 TREHC--SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
TR++ + ++ AR+ + A + + D+V W ++ A+
Sbjct: 252 TRDNVLGTTLLTTYARSNDLSRARATFDAIQ-SPDVVSWNAMAAA 295
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 117/227 (51%), Gaps = 16/227 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +++ L EA + + ++ T+ ++ A +S S+ GR++H ++
Sbjct: 396 NSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVV 455
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP--QRNVVSWTAMIAGCSQNYQENDA 120
+ + D V+QN +LNMY KCGSL+DA+ FDK Q +V++WT+++AG +Q Q A
Sbjct: 456 SNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERA 515
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL-------HAHVIKSEHGSHLIA 173
+KL+ M Q GV P TF S + AC+ G + G +L H V S+H S
Sbjct: 516 LKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFS---- 571
Query: 174 QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
++ + + R+ +A + ++ DV +W +++ A K ELE
Sbjct: 572 --CIVDLLGRCGRLDEAEKLLERTSQADVITWMALLDA-CKNSKELE 615
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 177/545 (32%), Positives = 286/545 (52%), Gaps = 34/545 (6%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA-----RMGFDK 95
++S +S + K + LS +PD V N I++ Y + G E+A MG K
Sbjct: 262 MVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLK 321
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ NVVSWTA+IAG QN + +A+ ++ +M+ GV P T S + AC+ L + G
Sbjct: 322 DFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHG 381
Query: 156 RQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
R++H + IK E S L+ N+L+ Y K + AR F I + D+ SW +M+A ++
Sbjct: 382 REIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYAL 441
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGV 274
G EA+ +EM G PD+ +WN L+ G
Sbjct: 442 RGSHEEAIELLSEMKFQGI---------------------------EPDIITWNGLVTGF 474
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+ + A+ F M + P+ T+ L AC L G ++H Y+++ + +
Sbjct: 475 TQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELST 534
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V +A+++MY+ C L A VF EL D V WNSII+AC Q ++ L M
Sbjct: 535 GVGSALISMYSGCDSLEVACSVFSELSTR-DVVVWNSIISACAQSGRSVNALDLLREMNL 593
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
S ++ + +T + AC+K+A+L ++H +I + GL F++N L+D+Y +CGS+
Sbjct: 594 SNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQK 653
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
+R++F+ M D+VSW+ +I Y G G +A+ LF R++G+ PN +T +L+ACSH
Sbjct: 654 SRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSH 713
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
GL+EEG +++M+ EY + P E +C+VDLL+RAG +E +FI +M + + VW
Sbjct: 714 SGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWG 773
Query: 575 SLLAS 579
SLL +
Sbjct: 774 SLLGA 778
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 160/587 (27%), Positives = 279/587 (47%), Gaps = 50/587 (8%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
YA ++ C L +L+LG +VH ++++ L + +L +Y + G +EDAR FDKM
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+RNV SWTA++ + IKL+ M+ GV P F F + KACS L + +G+
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
++ +++ + + +++ M+ K R+ AR F I KDV W M++ ++ G
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEID-----SPDLASW 267
+AL ++M G +P++ + ++ S + + F E+ P++ SW
Sbjct: 272 FKKALKCISDMKLSGV-KPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
ALIAG + EA+S+F +M + P+ +T+ S + AC L G ++H Y IK
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIK 390
Query: 328 M-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+ DS++ V N+++ YAKC + A F + K D VSWN+++A EE
Sbjct: 391 VEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMI-KQTDLVSWNAMLAGYALRGSHEEAI 449
Query: 387 RLFSRMLASQIKPDHITFNDV-----------------------------------MGAC 411
L S M I+PD IT+N + + AC
Sbjct: 450 ELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAAC 509
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
++ +L++ ++H Y+ + + V + L+ +Y C SL A +F+ + DVV W+
Sbjct: 510 GQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWN 569
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
S+I AQ G AL L M V N VT+V L ACS + + +G +++ +
Sbjct: 570 SIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI-IR 628
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G+ + ++D+ R G + ++ + M D+V W +++
Sbjct: 629 CGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMIS 674
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 155/307 (50%), Gaps = 16/307 (5%)
Query: 15 YNEALVAYDFSQNNTNIRIRP--STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
Y + A +F Q ++ + P +T +G ++AC +R+L+LG+++H ++L + + +
Sbjct: 477 YGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGV 536
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
+ +++MY C SLE A F ++ R+VV W ++I+ C+Q+ + +A+ L +M S V
Sbjct: 537 GSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNV 596
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
T S + ACS L ++ G+++H +I+ + N+LI MY + I +R
Sbjct: 597 EVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRR 656
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-- 250
+F + ++D+ SW MI+ + G+ ++A+ F G +PN F ++ SACS+
Sbjct: 657 IFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMG-LKPNHITFTNLLSACSHSG 715
Query: 251 -------FARILFNEID-SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
+ +++ E P + + ++ ++ NE + +M P+
Sbjct: 716 LIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKM---PFEPNAAVW 772
Query: 303 HSLLCAC 309
SLL AC
Sbjct: 773 GSLLGAC 779
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 192/583 (32%), Positives = 304/583 (52%), Gaps = 46/583 (7%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A + AC+ R++ G++VH + +V + ++N+Y K G ++ A + FD +P
Sbjct: 118 ASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPV 177
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+N V+WTA+I G SQ Q A++L+ +M GV P +F S + ACS LG + GRQ
Sbjct: 178 KNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQT 237
Query: 159 H--AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
H A+ I E + +I NALI +Y K R+ AR +F + +++ SW +MIA + +
Sbjct: 238 HGYAYRIAVETDASVI--NALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNS 295
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+ EA+ F ++ G +QP+ F S+ ++C +
Sbjct: 296 CDAEAMAMFWQLSQEG-WQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVK 354
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR +F + D S+NA+I G + + A+ +FS+MR L
Sbjct: 355 NSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLK 414
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P LT SLL + + Q+H I+K G ++ ++++ +Y+K S++ +A V
Sbjct: 415 PSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAV 474
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F L N D V WN++I Q+ Q EE +LF+++ S + P+ TF ++ + + S
Sbjct: 475 FN-LMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVS 533
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
+ Q H I K G D V N L+D+Y KCG + R LF DV+ W+S+I
Sbjct: 534 MFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMIST 593
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
YAQ G +EAL +F M GV PN VT VGVL+AC+H GLV+EGL + M+ +Y I P
Sbjct: 594 YAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEP 653
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH + VV+L R+G +H A++FI +M + VW+SLL++
Sbjct: 654 GTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSA 696
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 165/582 (28%), Positives = 294/582 (50%), Gaps = 48/582 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+S + R +L H +++ PD+ L N +L Y K G + DAR FD+MP +N
Sbjct: 17 LLSCLAGDRLHRLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKN 76
Query: 101 VVSWTAMIAGCSQNYQENDAIKLY--IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+VSW + I+ +Q+ E DA+ L+ Q G P +F S ++AC+ +V G+Q+
Sbjct: 77 LVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQV 136
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H ++ ++ ALI +Y K I A VF + K+ +W ++I +S++G
Sbjct: 137 HGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQG 196
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACS----------------------------- 249
AL F +M G +P+ F+ S SACS
Sbjct: 197 GVALELFGKMGLDGV-RPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINA 255
Query: 250 -----------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
+ AR LF+ +++ +L SW +IAG +S EAM++F ++ PD
Sbjct: 256 LIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPD 315
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
S+L +C ++QG QVH++ IK +S+ V N+++ MYAKC L A VF+
Sbjct: 316 VFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFE 375
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
L ++ D++S+N++I + +FS+M +KP +TF ++G + +++E
Sbjct: 376 ALAED-DAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIE 434
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
+ Q+H I K+G + D++ + L+D+Y K + A+ +FN M N D+V W+++I G A
Sbjct: 435 LSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLA 494
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPT 537
Q G+EA+KLF +++ G++PN T V ++T S + + G + +I++ G
Sbjct: 495 QNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKA--GADSD 552
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++D+ A+ G + E + + D++ W S++++
Sbjct: 553 HHVSNALIDMYAKCGFIKEGR-LLFESTLGKDVICWNSMIST 593
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 155/495 (31%), Positives = 250/495 (50%), Gaps = 50/495 (10%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP + A +SACS+L L+ GR+ H + + D + N ++++Y KC L AR
Sbjct: 211 VRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLAR 270
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD M RN+VSWT MIAG QN + +A+ ++ Q+ Q G P F SI+ +C L
Sbjct: 271 KLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLA 330
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ GRQ+HAH IK+ S +N+LI MY K + + +AR VF +A D S+ +MI
Sbjct: 331 AIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIE 390
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------- 251
+S+LG A+ F++M + + +P+ F S+ S+
Sbjct: 391 GYSRLGDLAGAIDVFSKM-RYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTS 449
Query: 252 ---------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
A+ +FN + + D+ WNA+I G+A + EA+ LF+++
Sbjct: 450 LDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQL 509
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ L P+ T +L+ ++++ G Q H+ IIK G DS+ V NA++ MYAKC +
Sbjct: 510 QVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFI 569
Query: 351 CNALLVFKE-LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L+F+ LGK D + WNS+I+ QH QAEE +F M + ++P+++TF V+
Sbjct: 570 KEGRLLFESTLGK--DVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLS 627
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMN--GLMDIYIKCGSLGSARKLFNFME-NPD 466
ACA A L H KT A + + +++++ + G L +A++ M P
Sbjct: 628 ACAH-AGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPA 686
Query: 467 VVSWSSLILGYAQFG 481
W SL+ FG
Sbjct: 687 AAVWRSLLSACHLFG 701
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 124/221 (56%), Gaps = 1/221 (0%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
+++ P T+ L+ SS +++L +++H I+ S D+ + ++++Y K +EDA
Sbjct: 412 SLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDA 471
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
+ F+ M R++V W AMI G +QN Q +A+KL+ Q+ SG+ P +FTF +++ S L
Sbjct: 472 KAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTL 531
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
S+ G+Q HA +IK+ S NALI MY K I + R +F KDV W SMI
Sbjct: 532 VSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMI 591
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
+ +++ G EAL F M G +PN F V SAC++
Sbjct: 592 STYAQHGQAEEALYVFRMMGGTGV-EPNYVTFVGVLSACAH 631
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 143/283 (50%), Gaps = 18/283 (6%)
Query: 305 LLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
LL +C+ L++ + + H+ + G ++ + N +L Y+K + +A +F + +
Sbjct: 16 LLLSCLAGDRLHRLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRM-PH 74
Query: 364 ADSVSWNSIIAACLQHNQAEE---LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
+ VSW S I+ QH E+ LF F R + P+ + ACA+ ++
Sbjct: 75 KNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGE-APNEFLLASALRACAQSRAVSFG 133
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
Q+H + GL +V+V L+++Y K G + +A +F+ + + V+W+++I GY+Q
Sbjct: 134 QQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQI 193
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL----HLYRI-MENEYGII 535
G G AL+LF +M GV P+ L ++ACS +G +E G + YRI +E + +I
Sbjct: 194 GQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVI 253
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++DL + + A + M + ++V W +++A
Sbjct: 254 ------NALIDLYCKCSRLSLARKLFDCME-NRNLVSWTTMIA 289
>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 655
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 195/588 (33%), Positives = 307/588 (52%), Gaps = 53/588 (9%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKC--QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
L+ +C R+L LG+ +H H+L VL N + +Y C +E AR FD++P
Sbjct: 5 LLESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDEIPH 63
Query: 99 R--NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
N ++W MI N A+ LY +ML SGV P +FT+ ++KAC+GL ++ G+
Sbjct: 64 PRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGK 123
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H+HV S + + AL+ Y K + A VF + ++D+ +W +MI+ FS
Sbjct: 124 LIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHC 183
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSA----------------------------- 247
+ + F +M PN +F A
Sbjct: 184 CLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 248 -----------CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM---RDR 293
C +AR +F+ + +W+A+I G + EA +F +M D
Sbjct: 244 TGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVNADM 303
Query: 294 ELL-PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
++ P + + + CA G L+ G VH Y IK GF ++ V N +++ YAK LC+
Sbjct: 304 AMVTPVAIGLILMGCARFGDLS--GGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCD 361
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A F E+G D VS+NS+I+ C+++ +AEE FRLF +M +S I+PD T ++ AC+
Sbjct: 362 AFRQFTEIGLK-DIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACS 420
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+A+L + H Y G A + + N LMD+Y KCG L A+++F+ M D+VSW++
Sbjct: 421 NLAALGHGSSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNT 480
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM-ENE 531
++ G+ G G EAL LF M+ GV P+ VTL+ +L+ACSH GLV+EG L+ M +
Sbjct: 481 MLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGD 540
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ +IP +H +C+ DLLARAG + EA DF+N+M + DI V +LL++
Sbjct: 541 FNVIPRLDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSA 588
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 149/586 (25%), Positives = 257/586 (43%), Gaps = 61/586 (10%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
N + E + + N+ +R TY ++ AC+ LR+++ G+ +H H+ S D+
Sbjct: 80 SNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGKLIHSHVKCSNFAADMY 139
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ +++ Y KCG L+ A FD+MP+R++V+W AMI+G S + D I L++ M +S
Sbjct: 140 VCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHCCLTDVIGLFLDMRRSD 199
Query: 132 VM-PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
+ P T + A G++ G+ +H + + + L+ + ++ +Y K I+ A
Sbjct: 200 CLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYA 259
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY-QPNEFIFGSVFSACS 249
R VF +K+ +W +MI + + EA F +ML + G + C+
Sbjct: 260 RRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVNADMAMVTPVAIGLILMGCA 319
Query: 250 NFARI----------------------------------------LFNEIDSPDLASWNA 269
F + F EI D+ S+N+
Sbjct: 320 RFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAFRQFTEIGLKDIVSYNS 379
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
LI+G + A E+ LF +M+ + PD T+ +L AC L G H Y + G
Sbjct: 380 LISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVVNG 439
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
+ N +CNA++ MY KC L A VF + K D VSWN+++ H +E LF
Sbjct: 440 YAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKR-DIVSWNTMLFGFGIHGLGKEALSLF 498
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV----MNGLMDI 445
+ M + + PD +T ++ AC+ ++ QL +++ F+V N + D+
Sbjct: 499 NSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGD--FNVIPRLDHYNCMTDL 556
Query: 446 YIKCGSLGSARKLFNFME-NPDVVSWSSLILG---YAQFGCGDEALKLFTRMRSLG-VSP 500
+ G L A N M PD+ +L+ Y G+E K +M+SLG +
Sbjct: 557 LARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNVELGNEVSK---KMQSLGETTE 613
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
+LV L +A E R+ + + G++ T + VD
Sbjct: 614 SLVLLSNTYSAAER----WEDAAKIRMTQKKSGLLKTPGYSWVDVD 655
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 236/490 (48%), Gaps = 60/490 (12%)
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSE--HGSHLIAQNALIAMYTKFDRILDARNVFSG 196
F ++++C ++ LG+ +H H++K S + N L +Y + + AR+VF
Sbjct: 2 FLRLLESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDE 60
Query: 197 I--ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA------- 247
I R + +W MI A+ G+ +AL + +ML+ G +P +F + V A
Sbjct: 61 IPHPRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGV-RPTKFTYPFVLKACAGLRAI 119
Query: 248 -----------CSNFARIL----------------------FNEIDSPDLASWNALIAGV 274
CSNFA + F+E+ D+ +WNA+I+G
Sbjct: 120 EDGKLIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGF 179
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL-TLYQGMQVHSYIIKMGFDSN 333
+ H + + LF +MR + L L+ + +GR L +G VH Y +MGF ++
Sbjct: 180 SLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
+ V IL +YAK + A VF K + V+W+++I +++ +E +F +ML
Sbjct: 240 LVVKTGILDVYAKSKCIIYARRVFDSDFKK-NEVTWSAMIGGYVENEMIKEAGEVFLQML 298
Query: 394 A----SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
+ + P + ++ CA+ L +HCY K G D+ V N ++ Y K
Sbjct: 299 VNADMAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKY 356
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
GSL A + F + D+VS++SLI G + +E+ +LF +M+S G+ P++ TL+G+L
Sbjct: 357 GSLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGIL 416
Query: 510 TACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
TACS++ + G H Y ++ N Y + C+ ++D+ + G ++ A+ + M
Sbjct: 417 TACSNLAALGHGSSCHGYCVV-NGYAV--NTSICNALMDMYTKCGKLYVAKRVFDTMH-K 472
Query: 568 ADIVVWKSLL 577
DIV W ++L
Sbjct: 473 RDIVSWNTML 482
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 34/253 (13%)
Query: 8 SLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQ 67
S C +N E ++ IR +T G+++ACS+L +L G H + +++
Sbjct: 382 SGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVVNGYA 441
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
+ + N +++MY KCG L A+ FD M +R++VSW M+ G + +A+ L+ M
Sbjct: 442 VNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSM 501
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
+GV P + T +I+ ACS G V G+QL +
Sbjct: 502 QDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSM------------------------- 536
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
+R F+ I R D + M ++ GY EA N+M ++P+ + G++ SA
Sbjct: 537 --SRGDFNVIPRLD--HYNCMTDLLARAGYLDEAYDFVNKM----PFEPDIRVLGTLLSA 588
Query: 248 CSNFARI-LFNEI 259
C + + L NE+
Sbjct: 589 CWTYKNVELGNEV 601
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 187/574 (32%), Positives = 308/574 (53%), Gaps = 71/574 (12%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T+A ++ +CSSL G ++H + DVV + +L+MY KC L+ + F
Sbjct: 175 TTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHS 234
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP++N VSW+A+IAGC QN ++L+ +M ++GV Q TF S+ ++C+GL ++ LG
Sbjct: 235 MPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLG 294
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
QLH H +K++ G+ ++ A + MY K + + DA+ +F+ + ++ S+ ++I +++
Sbjct: 295 SQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARS 354
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFG----------SVFSAC-SNF------------- 251
L +E+ GA++ I G S+ S C SN
Sbjct: 355 DKGL----GLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKC 410
Query: 252 -----ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
A ++F E+ S D SWNA+IA + N + +SLF
Sbjct: 411 GALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF------------------- 451
Query: 307 CACIGRLTLYQGMQVHSYIIK--MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
+H+ IIK +G DS V + A++ MY+KC ++ A + L +
Sbjct: 452 --------------IHNRIIKSRLGLDSFVGI--ALIDMYSKCGMMEKAEKLHDRLAEQT 495
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
VSWN+II+ Q+EE + FS+ML + PD+ T+ ++ CA + ++E+ Q+H
Sbjct: 496 -VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIH 554
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
I K L D ++ + L+D+Y KCG++ + +F N D V+W++++ GYAQ G G+
Sbjct: 555 AQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGE 614
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV 544
EALK+F M+ V PN T + VL AC H+GLVE+GLH + M + YG+ P EH SCV
Sbjct: 615 EALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCV 674
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
VD++ R+G V +A + I M +AD V+W++LL+
Sbjct: 675 VDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 708
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 162/616 (26%), Positives = 271/616 (43%), Gaps = 124/616 (20%)
Query: 34 RPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE------ 87
+ T++ + CS ++L G++ H ++L++ +P V + N ++ MY KC LE
Sbjct: 41 KKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVF 100
Query: 88 -------------------------DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
A+ FD MP+R+VVSW ++I+G N I
Sbjct: 101 DGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVID 160
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+++QM + G + + TF ++K+CS L G Q+H +K ++ +AL+ MY
Sbjct: 161 VFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYA 220
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K ++ + F + K+ SW ++IA + L F EM G ++ F
Sbjct: 221 KCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGV-GVSQSTFA 279
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
SVF +C+ A+ LFN + +
Sbjct: 280 SVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNH 339
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+L S+NA+I G A D+ L D +++ AC +G+QVH
Sbjct: 340 NLQSYNAIIVGYAR--------------SDKGLGLDEVSLSGAFRACAVIKGDLEGLQVH 385
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+K SN+ V NAIL MY KC L A LVF+E+ + D+VSWN+IIAA Q+
Sbjct: 386 GLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAAHEQNGNE 444
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
E+ LF +H I K+ L D FV L
Sbjct: 445 EKTLSLF---------------------------------IHNRIIKSRLGLDSFVGIAL 471
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y KCG + A KL + + VVSW+++I G++ +EA K F++M +GV P+
Sbjct: 472 IDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDN 531
Query: 503 VTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
T +L C+++ VE G ++ +I++ E + S +VD+ ++ G + + + I
Sbjct: 532 FTYATILDTCANLVTVELGKQIHAQIIKKE--LQSDAYISSTLVDMYSKCGNMQDFQ-LI 588
Query: 562 NQMACDADIVVWKSLL 577
+ A + D V W +++
Sbjct: 589 FEKAPNRDFVTWNAMV 604
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 225/455 (49%), Gaps = 29/455 (6%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ + ST+A + +C+ L +L+LG ++H H L + DVV+ L+MY KC +L DA+
Sbjct: 271 VGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQ 330
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F+ +P N+ S+ A+I G Y +D G+ + + +AC+ +
Sbjct: 331 KLFNSLPNHNLQSYNAIIVG----YARSD----------KGLGLDEVSLSGAFRACAVIK 376
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
G Q+H +KS S++ NA++ MY K +++A VF + +D SW ++IA
Sbjct: 377 GDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIA 436
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQP----NEFI---FGSVFSACSNF--ARILFNEIDS 261
A + G E + L F +H+ + + F+ ++S C A L + +
Sbjct: 437 AHEQNGNEEKTLSLF---IHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAE 493
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
+ SWNA+I+G + + EA FS+M + + PD T ++L C +T+ G Q+
Sbjct: 494 QTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQI 553
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H+ IIK S+ + + ++ MY+KC + + L+F E N D V+WN+++ QH
Sbjct: 554 HAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIF-EKAPNRDFVTWNAMVCGYAQHGL 612
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM-VTQLHCYITKTGLAFDVFVMN 440
EE ++F M +KP+H TF V+ AC M +E + H ++ GL + +
Sbjct: 613 GEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYS 672
Query: 441 GLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++DI + G + A +L M D V W +L+
Sbjct: 673 CVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLL 707
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 180/420 (42%), Gaps = 79/420 (18%)
Query: 7 SSLCKQNL--YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLS 64
+SL NL YN +V Y ++++ + + + +G AC+ ++ G +VH + S
Sbjct: 334 NSLPNHNLQSYNAIIVGY--ARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKS 391
Query: 65 KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
CQ ++ + N IL+MYGKCG+L +A + F++M R+ VSW A+IA QN E + L+
Sbjct: 392 LCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF 451
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
I H +IKS G ALI MY+K
Sbjct: 452 I---------------------------------HNRIIKSRLGLDSFVGIALIDMYSKC 478
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ A + +A + V SW ++I+ FS EA F++ML G P+ F + ++
Sbjct: 479 GMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGV-DPDNFTYATI 537
Query: 245 FSACSNFA----------------------------------------RILFNEIDSPDL 264
C+N +++F + + D
Sbjct: 538 LDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDF 597
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHS 323
+WNA++ G A H EA+ +F M+ + P+ T ++L AC + +G+ HS
Sbjct: 598 VTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHS 657
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ G D + + ++ + + + AL + + + AD+V W ++++ C H E
Sbjct: 658 MLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVE 717
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 65/156 (41%), Gaps = 33/156 (21%)
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
FS A+ K TF+ + C+ +L Q H + T VFV N L+ +YIK
Sbjct: 32 FSSYQATPTKKK--TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIK 89
Query: 449 C-------------------------------GSLGSARKLFNFMENPDVVSWSSLILGY 477
C G +G A+KLF+ M DVVSW+SLI GY
Sbjct: 90 CSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGY 149
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
G + + +F +M +G + T VL +CS
Sbjct: 150 LHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCS 185
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 194/582 (33%), Positives = 299/582 (51%), Gaps = 41/582 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
++Y ++ C+ +SL+ G++VH I+ + D L ++ MY CG L R FDK
Sbjct: 95 NSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDK 154
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ V W +++ ++ +++ L+ +M + GV+ +TF ++K + LG V
Sbjct: 155 IMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKEC 214
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+++H +V+K GS+ N+LIA Y KF + A N+F ++ DV SW SMI
Sbjct: 215 KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVN 274
Query: 216 GYELEALCHFNEML-----------------------------HHG----AYQPNEFIFG 242
G+ L F +ML HG A E +F
Sbjct: 275 GFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFS 334
Query: 243 S----VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+ ++S C N A +F ++ + SW ++IA ++A+ LF EM+ + +
Sbjct: 335 NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVR 394
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD TV S++ AC +L +G VHSY+IK G SN+PV NA++ MYAKC + A LV
Sbjct: 395 PDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLV 454
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F ++ D VSWN++I Q+ E LF M Q KPD IT V+ ACA +A+
Sbjct: 455 FSKI-PVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAA 512
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L+ ++H +I + G D+ V L+D+Y KCG L A+ LF+ + D++SW+ +I G
Sbjct: 513 LDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAG 572
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y G G+EA+ F MR G+ P+ + +L ACSH GL+ EG + M NE G+ P
Sbjct: 573 YGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEP 632
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
EH +CVVDLLAR G + +A FI M D +W LL+
Sbjct: 633 KLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLS 674
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/487 (26%), Positives = 237/487 (48%), Gaps = 51/487 (10%)
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
G ++ S+++ C+ S+ G+++H+ +I + L+ MY ++ R +F
Sbjct: 93 GLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIF 152
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG---------------------- 232
I V W +++ ++K+G E++ F +M G
Sbjct: 153 DKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVK 212
Query: 233 ------------AYQPNEFIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVA 275
+ N + S+ +A F + LF+E+ PD+ SWN++I G
Sbjct: 213 ECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCV 272
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC--IGRLTLYQGMQVHSYIIKMGFDSN 333
+ + + +F +M + D T+ S+L AC IG L+L G +H + +K F
Sbjct: 273 VNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSL--GRALHGFGVKACFSEE 330
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
V N +L MY+KC L A VF ++G + VSW SIIAA ++ + LF M
Sbjct: 331 VVFSNTLLDMYSKCGNLNGATEVFVKMG-DTTIVSWTSIIAAYVREGLYSDAIGLFDEMQ 389
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
+ ++PD T ++ ACA +SL+ +H Y+ K G+ ++ V N L+++Y KCGS+
Sbjct: 390 SKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVE 449
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
AR +F+ + D+VSW+++I GY+Q +EAL+LF M+ P+ +T+ VL AC+
Sbjct: 450 EARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK-QFKPDDITMACVLPACA 508
Query: 514 HVGLVEEGLHLY-RIMENEYGIIPTREHCSC-VVDLLARAGCVHEAEDFINQMACDADIV 571
+ +++G ++ I+ Y + H +C +VD+ A+ G + A+ + M D++
Sbjct: 509 GLAALDKGREIHGHILRRGYF---SDLHVACALVDMYAKCGLLVLAQ-LLFDMIPKKDLI 564
Query: 572 VWKSLLA 578
W ++A
Sbjct: 565 SWTVMIA 571
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 209/444 (47%), Gaps = 46/444 (10%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ + +T ++ AC+++ +L LGR +H + + +VV N +L+MY KCG+L A
Sbjct: 292 VEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGAT 351
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F KM +VSWT++IA + +DAI L+ +M GV P +T SI+ AC+
Sbjct: 352 EVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSS 411
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
S+ GR +H++VIK+ GS+L NALI MY K + +AR VFS I KD+ SW +MI
Sbjct: 412 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 471
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-------------------- 250
+S+ EAL F +M ++P++ V AC+
Sbjct: 472 GYSQNLLPNEALELFLDM--QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYF 529
Query: 251 --------------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
A++LF+ I DL SW +IAG H NEA+S F+EM
Sbjct: 530 SDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEM 589
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
R + PD + ++L AC L +G + +S + G + + ++ + A+
Sbjct: 590 RIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGN 649
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L A + + D+ W +++ C H+ + ++ + +++PD+ + V+
Sbjct: 650 LSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIF--ELEPDNTRYYVVLA 707
Query: 410 AC-AKMASLEMVTQLHCYITKTGL 432
A+ E V +L + K G
Sbjct: 708 NVYAEAEKWEEVKKLRKRMQKRGF 731
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 205/419 (48%), Gaps = 32/419 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILL 63
+++ ++ LY++A+ +D Q+ +RP Y ++ AC+ SL GR VH +++
Sbjct: 369 IAAYVREGLYSDAIGLFDEMQSKG---VRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK 425
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
+ ++ + N ++NMY KCGS+E+AR+ F K+P +++VSW MI G SQN N+A++L
Sbjct: 426 NGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALEL 485
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
++ M Q P T ++ AC+GL ++ GR++H H+++ + S L AL+ MY K
Sbjct: 486 FLDM-QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAK 544
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
++ A+ +F I +KD+ SW MIA + G+ EA+ FNEM G +P+E F +
Sbjct: 545 CGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAG-IEPDESSFSA 603
Query: 244 VFSACS-----NFARILFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
+ +ACS N FN + + P L + ++ +A N ++A M
Sbjct: 604 ILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESM--- 660
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ PD LL C + +V +I ++ D N + +YA+
Sbjct: 661 PIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPD-NTRYYVVLANVYAEAEKWEEV 719
Query: 354 LLVFKELGKNA----DSVSW-------NSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+ K + K SW N +A +H QA+++ L S++ D+
Sbjct: 720 KKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDY 778
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 111/218 (50%), Gaps = 18/218 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N + + L NEAL + Q + +P T A ++ AC+ L +L GR++H H
Sbjct: 467 NTMIGGYSQNLLPNEALELFLDMQK----QFKPDDITMACVLPACAGLAALDKGREIHGH 522
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
IL D+ + +++MY KCG L A++ FD +P+++++SWT MIAG + N+A
Sbjct: 523 ILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEA 582
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV-------IKSEHGSHLIA 173
I + +M +G+ P + +F +I+ ACS G + G + + K EH + ++
Sbjct: 583 ISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVD 642
Query: 174 QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
A + +K + +++ + + D T WG +++
Sbjct: 643 LLARMGNLSKAYKFIESMPI-----KPDTTIWGVLLSG 675
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 195/612 (31%), Positives = 308/612 (50%), Gaps = 73/612 (11%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQP--DVVLQNHILNMYGKCGSLEDARMGFDK 95
+ ++ A +++ L LG+++H H+ P V + N ++NMYGKCG L AR FD
Sbjct: 333 FPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDD 392
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL-GSVCL 154
+P R+ VSW +MIA + + ++ L+ ML V P FT S+ ACS + G V L
Sbjct: 393 IPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRL 452
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+Q+HA+ +++ NAL+ MY + R+ DA+ +F KD+ SW ++I++ S+
Sbjct: 453 GKQVHAYTLRNGD-LRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQ 511
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------- 251
EAL + M+ G +P+ SV ACS
Sbjct: 512 NDRFEEALMYVYLMIVDGV-RPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENS 570
Query: 252 ------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RD 292
R++F+ + +A WNAL+AG A + ++A+ LF EM +
Sbjct: 571 FVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISE 630
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
E P+ T S+L AC+ +H YI+K GF + V NA++ MY++ +
Sbjct: 631 SEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEI 690
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ---------------- 396
+ +F + K D VSWN++I C+ + ++ L M Q
Sbjct: 691 SKTIFGRMNKR-DIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGG 749
Query: 397 --IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
KP+ +T V+ CA +A+L ++H Y K LA DV V + L+D+Y KCG L
Sbjct: 750 VPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNL 809
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG------VSPNLVTLVGV 508
A ++F+ M +V++W+ LI+ Y G G+EAL+LF M + G + PN VT + +
Sbjct: 810 ASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAI 869
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
ACSH G+V+EGLHL+ M+ +G+ P +H +C+VDLL R+G V EA + IN M +
Sbjct: 870 FAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNL 929
Query: 569 DIV-VWKSLLAS 579
+ V W SLL +
Sbjct: 930 NKVDAWSSLLGA 941
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 151/544 (27%), Positives = 241/544 (44%), Gaps = 70/544 (12%)
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+R+ W ++ + + DAI Y ML + P F F +++KA + + +CLG+Q
Sbjct: 292 RRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQ 351
Query: 158 LHAHVIKSEHG--SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+HAHV K H S + N+L+ MY K + AR VF I +D SW SMIA +
Sbjct: 352 IHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRF 411
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------------- 249
E E H ++ P F SV ACS
Sbjct: 412 -EEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTYT 470
Query: 250 --------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
N A+ LF D DL SWN +I+ ++ + EA+ M +
Sbjct: 471 NNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGV 530
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNAL 354
PDG+T+ S+L AC L G ++H Y ++ G N V A++ MY C
Sbjct: 531 RPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGR 590
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA-SQIKPDHITFNDVMGACAK 413
LVF + + +V WN+++A ++ ++ RLF M++ S+ P+ TF V+ AC +
Sbjct: 591 LVFDGVVRRTVAV-WNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVR 649
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+H YI K G D +V N LMD+Y + G + ++ +F M D+VSW+++
Sbjct: 650 CKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTM 709
Query: 474 ILGYAQFGCGDEALKLFTRMR------------------SLGVSPNLVTLVGVLTACSHV 515
I G G D+AL L M+ + PN VTL+ VL C+ +
Sbjct: 710 ITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAAL 769
Query: 516 GLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
+ +G +H Y + + + S +VD+ A+ GC++ A +QM +++ W
Sbjct: 770 AALGKGKEIHAYAVKQKLAMDVAV---GSALVDMYAKCGCLNLASRVFDQMPI-RNVITW 825
Query: 574 KSLL 577
L+
Sbjct: 826 NVLI 829
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/541 (24%), Positives = 241/541 (44%), Gaps = 72/541 (13%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRS-LQLGRKVHDHI 61
N +++LC+ + +L + + N+ T + ACS +R ++LG++VH +
Sbjct: 402 NSMIATLCRFEEWELSLHLFRLMLSE-NVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYT 460
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
L + N ++ MY + G + DA+ F +++VSW +I+ SQN + +A+
Sbjct: 461 LRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEAL 519
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS-EHGSHLIAQNALIAM 180
M+ GV P T S++ ACS L + +GR++H + +++ + + AL+ M
Sbjct: 520 MYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDM 579
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y + R VF G+ R+ V W +++A +++ ++ +AL F EM+ + PN
Sbjct: 580 YCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATT 639
Query: 241 FGSVFSAC-----------------------------------SNFARI-----LFNEID 260
F SV AC S R+ +F ++
Sbjct: 640 FASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMN 699
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRE------------------LLPDGLTV 302
D+ SWN +I G ++A++L EM+ R+ P+ +T+
Sbjct: 700 KRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTL 759
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
++L C L +G ++H+Y +K +V V +A++ MYAKC L A VF ++
Sbjct: 760 MTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPI 819
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ------IKPDHITFNDVMGACAKMAS 416
+ ++WN +I A H + EE LF M A I+P+ +T+ + AC+
Sbjct: 820 R-NVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGM 878
Query: 417 LEMVTQL-HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN--PDVVSWSSL 473
++ L H G+ L+D+ + G + A +L N M + V +WSSL
Sbjct: 879 VDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSL 938
Query: 474 I 474
+
Sbjct: 939 L 939
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 151/332 (45%), Gaps = 24/332 (7%)
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
E SP + W L+ S+ +A+S ++ M PD ++L A L
Sbjct: 291 ERRSP--SQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCL 348
Query: 318 GMQVHSYIIKMGF--DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
G Q+H+++ K G S+V V N+++ MY KC L A VF ++ + D VSWNS+IA
Sbjct: 349 GKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDI-PDRDHVSWNSMIAT 407
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM-ASLEMVTQLHCYITKTGLAF 434
+ + E LF ML+ + P T V AC+ + + + Q+H Y + G
Sbjct: 408 LCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DL 466
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
+ N L+ +Y + G + A+ LF + D+VSW+++I +Q +EAL M
Sbjct: 467 RTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMI 526
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEG--LHLY-----RIMENEY-GIIPTREHCSCVVD 546
GV P+ VTL VL ACS + + G +H Y ++EN + G +C+C
Sbjct: 527 VDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQP 586
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
R + + VW +LLA
Sbjct: 587 KKGR---------LVFDGVVRRTVAVWNALLA 609
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 185/438 (42%), Gaps = 64/438 (14%)
Query: 14 LYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQ 73
L+ E + +F N T T+A ++ AC + +H +I+ D +Q
Sbjct: 623 LFVEMISESEFCPNAT-------TFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQ 675
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ---- 129
N +++MY + G +E ++ F +M +R++VSW MI GC + +DA+ L +M +
Sbjct: 676 NALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGE 735
Query: 130 ------------SGV--MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
GV P T +++ C+ L ++ G+++HA+ +K + + +
Sbjct: 736 DGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGS 795
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA-- 233
AL+ MY K + A VF + ++V +W +I A+ G EAL F M G
Sbjct: 796 ALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSN 855
Query: 234 ---YQPNEFIFGSVFSACSNFARI-----LFNEIDS-----PDLASWNALIAGVASHSNA 280
+PNE + ++F+ACS+ + LF+ + + P + L+ +
Sbjct: 856 REVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRV 915
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF--DSNVPVCN 338
EA L + M P L + +G ++Q ++ K F + NV
Sbjct: 916 KEAYELINTM------PSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHY 969
Query: 339 AILT-MYAKCSVLCNALLV---FKELG-KNADSVSW-------NSIIAACLQHNQAEELF 386
+++ +Y+ + AL V KE+G + SW + ++ H Q++EL
Sbjct: 970 VLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELH 1029
Query: 387 R----LFSRMLASQIKPD 400
L RM PD
Sbjct: 1030 EYLETLSQRMRKEGYVPD 1047
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 10/185 (5%)
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLA--FDVFVMNGLMDIYIKCGSLGSARK 457
D+ F V+ A A + L + Q+H ++ K G A V V N L+++Y KCG L +AR+
Sbjct: 329 DNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQ 388
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV-G 516
+F+ + + D VSW+S+I +F + +L LF M S V P TLV V ACSHV G
Sbjct: 389 VFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRG 448
Query: 517 LVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
V G +H Y + + + +V + AR G V++A+ D+V W
Sbjct: 449 GVRLGKQVHAYTLRNGDLRTYTN----NALVTMYARLGRVNDAKALFGVFD-GKDLVSWN 503
Query: 575 SLLAS 579
++++S
Sbjct: 504 TVISS 508
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 189/588 (32%), Positives = 314/588 (53%), Gaps = 45/588 (7%)
Query: 34 RPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+P+ Y A ++ AC+ L +L ++H ++ DV + +++ Y K G +++AR+
Sbjct: 151 KPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARL 210
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD + + V+WTA+IAG ++ + ++KL+ QM + V P ++ S++ ACS L
Sbjct: 211 IFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEF 270
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ G+Q+H +V++ + N +I Y K ++ R +F+ + KDV SW +MIA
Sbjct: 271 LEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAG 330
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
+ + +A+ F EM+ G ++P+ F SV ++C +
Sbjct: 331 CMQNSFHGDAMDLFVEMVRKG-WKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDN 389
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
AR +F+ + + ++ S+NA+I G + EA+ LF EMR
Sbjct: 390 DDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMR 449
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
P LT SLL L Q+H IIK G + +A++ +Y+KCS +
Sbjct: 450 LSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVG 509
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A LVF+E+ + D V WN++ + Q + EE +L+ + S++KP+ TF V+ A
Sbjct: 510 DARLVFEEI-YDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAA 568
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ +ASL Q H + K GL D FV N L+D+Y KCGS+ + K F+ D+ W+
Sbjct: 569 SNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWN 628
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
S+I YAQ G +AL++F RM GV PN VT VG+L+ACSH GL++ G H + M ++
Sbjct: 629 SMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESM-SK 687
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+GI P +H +C+V LL RAG ++EA++F+ +M VVW+SLL++
Sbjct: 688 FGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSA 735
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 169/567 (29%), Positives = 284/567 (50%), Gaps = 46/567 (8%)
Query: 55 RKVHDHIL-LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ 113
+K+H HI+ L Q DV L N +L+ Y K DA+ FD MP RN+V+W++M++ +Q
Sbjct: 71 KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQ 130
Query: 114 NYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
+ +A+ L+ + ++S P ++ S+++AC+ LG++ QLH V+K +
Sbjct: 131 HGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVY 190
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
+LI Y K + +AR +F G+ K +W ++IA ++KLG +L FN+M G
Sbjct: 191 VGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQM-REG 249
Query: 233 AYQPNEFIFGSVFSACS----------------------------------------NFA 252
P+ ++ SV SACS
Sbjct: 250 DVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTG 309
Query: 253 RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
R LFN + D+ SW +IAG +S +AM LF EM + PD S+L +C
Sbjct: 310 RKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSL 369
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
L +G QVH+Y IK+ D++ V N ++ MYAKC L NA VF +L + VS+N++
Sbjct: 370 QALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVF-DLVAAINVVSYNAM 428
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
I + ++ E LF M S P +TF ++G + + LE+ +Q+HC I K G+
Sbjct: 429 IEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGV 488
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
+ D F + L+D+Y KC +G AR +F + + D+V W+++ GY+Q +E+LKL+
Sbjct: 489 SLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKD 548
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAG 552
++ + PN T V+ A S++ + G + + + G+ + +VD+ A+ G
Sbjct: 549 LQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQV-IKMGLDDDPFVTNSLVDMYAKCG 607
Query: 553 CVHEAEDFINQMACDADIVVWKSLLAS 579
+ E+ + DI W S++++
Sbjct: 608 SIEESHKAFSS-TNQRDIACWNSMIST 633
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 239/486 (49%), Gaps = 47/486 (9%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ P Y + ++SACS L L+ G+++H ++L DV + N I++ Y KC ++ R
Sbjct: 251 VYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGR 310
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F+++ ++VVSWT MIAGC QN DA+ L+++M++ G P F S++ +C L
Sbjct: 311 KLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQ 370
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ GRQ+HA+ IK + +N LI MY K D + +AR VF +A +V S+ +MI
Sbjct: 371 ALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIE 430
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFI---------------------------FG- 242
+S+ +EAL F EM + P + FG
Sbjct: 431 GYSRQDKLVEALDLFREM--RLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGV 488
Query: 243 -----------SVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
V+S CS AR++F EI D+ WNA+ +G + E++ L+ +
Sbjct: 489 SLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKD 548
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
++ L P+ T +++ A +L G Q H+ +IKMG D + V N+++ MYAKC
Sbjct: 549 LQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGS 608
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ + F + D WNS+I+ QH A + +F RM+ +KP+++TF ++
Sbjct: 609 IEESHKAFSSTNQR-DIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLS 667
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVV 468
AC+ L++ ++K G+ + ++ + + G + A++ M P V
Sbjct: 668 ACSHAGLLDLGFHHFESMSKFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAV 727
Query: 469 SWSSLI 474
W SL+
Sbjct: 728 VWRSLL 733
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 174/340 (51%), Gaps = 24/340 (7%)
Query: 214 KLGYELEAL----------CHFNEMLHH-----GAYQPNEFIFGSVFSACSNF-----AR 253
K+G EL L H+ + +H G +Q + F+ ++ A S A+
Sbjct: 48 KIGRELGKLLQLPSPNILTSHYYKKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQ 107
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE-MRDRELLPDGLTVHSLLCACIGR 312
LF+ + +L +W+++++ H + EA+ LF MR P+ + S++ AC
Sbjct: 108 KLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQL 167
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
L Q +Q+H +++K GF +V V +++ YAK + A L+F L K +V+W +I
Sbjct: 168 GNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGL-KVKTTVTWTAI 226
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
IA + ++E +LF++M + PD + V+ AC+ + LE Q+H Y+ + G
Sbjct: 227 IAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGF 286
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
DV V+NG++D Y+KC + + RKLFN + + DVVSW+++I G Q +A+ LF
Sbjct: 287 DMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVE 346
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMEN 530
M G P+ VL +C + +++G +H Y I N
Sbjct: 347 MVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVN 386
>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Glycine max]
Length = 770
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 190/594 (31%), Positives = 311/594 (52%), Gaps = 22/594 (3%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N +S++ + +AL YD + I PS T+A + SAC SL GR+ H
Sbjct: 107 NTLISTMVRCGYERQALDTYDSVMLDGVI---PSHITFATVFSACGSLLDADCGRRTHGV 163
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
++ + ++ + N +L MY KCG DA F +P+ N V++T M+ G +Q Q +A
Sbjct: 164 VIKVGLESNIYVVNALLCMYAKCGLNADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEA 223
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACS----------GLGSVCLGRQLHAHVIKSEHGSH 170
+L+ ML+ G+ + S++ C+ G+ + G+Q+H +K
Sbjct: 224 AELFRLMLRKGIRVDSVSLSSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFERD 283
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
L N+L+ MY K + A VF + R V SW MIA + +A + M
Sbjct: 284 LHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQS 343
Query: 231 HGAYQPNEFIFGSVFSACSN-----FARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
G Y+P++ + ++ +AC R +F+ + P L SWNA+++G +++ EA+
Sbjct: 344 DG-YEPDDVTYINMLTACVKSGDVRTGRQIFDCMPCPSLTSWNAILSGYNQNADHREAVE 402
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
LF +M+ + PD T+ +L +C L G +VH+ K GF +V V ++++ +Y+
Sbjct: 403 LFRKMQFQCQHPDRTTLAVILSSCAELGFLEAGKEVHAASQKFGFYDDVYVASSLINVYS 462
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
KC + + VF +L + D V WNS++A ++ ++ F +M P +F
Sbjct: 463 KCGKMELSKHVFSKLPE-LDVVCWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFA 521
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
V+ +CAK++SL Q H I K G D+FV + L+++Y KCG + AR F+ M
Sbjct: 522 TVVSSCAKLSSLFQGQQFHAQIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGR 581
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
+ V+W+ +I GYAQ G G AL L+ M S G P+ +T V VLTACSH LV+EGL ++
Sbjct: 582 NTVTWNEMIHGYAQNGDGHNALCLYNDMISSGEKPDDITYVAVLTACSHSALVDEGLEIF 641
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M +YG++P H +C++D L+RAG +E E ++ M C D VVW+ +L+S
Sbjct: 642 NAMLQKYGVVPKVAHYTCIIDCLSRAGRFNEVEVILDAMPCKDDAVVWEVVLSS 695
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 142/620 (22%), Positives = 248/620 (40%), Gaps = 120/620 (19%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD---- 94
A L+ C + ++ G+ VH + D L NH + +Y KC + A FD
Sbjct: 10 ANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNIPH 69
Query: 95 ---------------------------KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
+MPQRN VS +I+ + E A+ Y +
Sbjct: 70 KNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSV 129
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
+ GV+P TF ++ AC L GR+ H VIK S++ NAL+ MY K
Sbjct: 130 MLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLN 189
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
DA VF I + ++ +M+ ++ EA F ML G + + S+
Sbjct: 190 ADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKG-IRVDSVSLSSMLGV 248
Query: 248 CSN------------------------------------------FARI--------LFN 257
C+ +A+I +F
Sbjct: 249 CAKGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFV 308
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
++ + SWN +IAG + N+ +A M+ PD +T ++L AC+ +
Sbjct: 309 NLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVKSGDVRT 368
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G Q+ FD +P C +L SWN+I++
Sbjct: 369 GRQI--------FDC-MP---------------CPSL------------TSWNAILSGYN 392
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
Q+ E LF +M PD T ++ +CA++ LE ++H K G DV+
Sbjct: 393 QNADHREAVELFRKMQFQCQHPDRTTLAVILSSCAELGFLEAGKEVHAASQKFGFYDDVY 452
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
V + L+++Y KCG + ++ +F+ + DVV W+S++ G++ G +AL F +MR LG
Sbjct: 453 VASSLINVYSKCGKMELSKHVFSKLPELDVVCWNSMLAGFSINSLGQDALSFFKKMRQLG 512
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
P+ + V+++C+ + + +G + + + G + S ++++ + G V+ A
Sbjct: 513 FFPSEFSFATVVSSCAKLSSLFQGQQFHAQIVKD-GFLDDIFVGSSLIEMYCKCGDVNGA 571
Query: 558 EDFINQMACDADIVVWKSLL 577
F + M + V W ++
Sbjct: 572 RCFFDVMP-GRNTVTWNEMI 590
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 134/305 (43%), Gaps = 44/305 (14%)
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
L + +L+ CI G VH+ + ++ S+ + N + +Y+KC + +A VF
Sbjct: 7 LNLANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDN 66
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRM--------------------------- 392
+ + + SWN+I+AA + + RLF +M
Sbjct: 67 I-PHKNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDT 125
Query: 393 ----LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
+ + P HITF V AC + + + H + K GL +++V+N L+ +Y K
Sbjct: 126 YDSVMLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAK 185
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
CG A ++F + P+ V++++++ G AQ EA +LF M G+ + V+L +
Sbjct: 186 CGLNADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSM 245
Query: 509 LTACSH----------VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAE 558
L C+ + +G ++ + + G C+ ++D+ A+ G + AE
Sbjct: 246 LGVCAKGERDVGPCHGISTNAQGKQMH-TLSVKLGFERDLHLCNSLLDMYAKIGDMDSAE 304
Query: 559 D-FIN 562
F+N
Sbjct: 305 KVFVN 309
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 184/573 (32%), Positives = 294/573 (51%), Gaps = 45/573 (7%)
Query: 49 RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMI 108
RSLQ G+ +H I+ S V + N ++N+Y KC L +A+ F+++ ++VVSW +I
Sbjct: 20 RSLQKGKALHAQIIKSSSSC-VYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCII 78
Query: 109 AGCSQNYQENDA--IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE 166
G SQ+ + ++L+ +M P TF + A S L GR HA IK +
Sbjct: 79 NGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMD 138
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
+ ++L+ MY K +AR VF + ++ SW +MI+ ++ EAL F
Sbjct: 139 SCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFR 198
Query: 227 EMLHHGAYQPNEFIFGSVFSACS---------------------------NFARILFNEI 259
++ NEF+F SV SA + N ++ +
Sbjct: 199 -LMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKC 257
Query: 260 DSPDLA-------------SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
S D A +W+A+I G A ++++A+ LFS M + P T ++
Sbjct: 258 GSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVI 317
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
AC ++G QVH Y++K+GF+S + V A++ MYAKCS + +A F L + D
Sbjct: 318 NACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYL-QEPDI 376
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
V W S+I +Q+ + E+ L+ RM I P+ +T V+ AC+ +A+LE Q+H
Sbjct: 377 VLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHAR 436
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
K G +V + + L +Y KCG L +F M DV+SW+++I G +Q GCG EA
Sbjct: 437 TVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEA 496
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
L+LF M+ G P+ VT V +L+ACSH+GLVE G +R+M +E+G+ P EH +C+VD
Sbjct: 497 LELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVD 556
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+L+RAG + EA +F D + +W+ +L +
Sbjct: 557 ILSRAGKLKEAIEFTESATIDHGMCLWRIILGA 589
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 142/467 (30%), Positives = 225/467 (48%), Gaps = 57/467 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHD-HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
T+AG+ +A S+L GR H I + C+ DV + + ++NMY K G +AR FD
Sbjct: 110 TFAGVFTAASTLVDAAGGRLAHAVAIKMDSCR-DVFVGSSLMNMYCKAGLTPEARKVFDT 168
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP+RN VSW MI+G + +A+ L+ M + +F F S++ A + V G
Sbjct: 169 MPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNG 228
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+Q+H +K+ S + NAL+ MY K + DA F + K+ +W +MI +++
Sbjct: 229 KQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQS 288
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G +AL F+ M H +P+EF F V +ACS+
Sbjct: 289 GDSDKALKLFSSM-HLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYV 347
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR F+ + PD+ W ++I G + +A+SL+ M +
Sbjct: 348 MTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGI 407
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
LP+ LT+ S+L AC L QG Q+H+ +K GF VP+ +A+ TMYAKC L + L
Sbjct: 408 LPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTL 467
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF+ + D +SWN++I+ Q+ +E LF M KPD++TF +++ AC+ M
Sbjct: 468 VFRRMPAR-DVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMG 526
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNG-------LMDIYIKCGSLGSA 455
+V + Y + FD F M+ ++DI + G L A
Sbjct: 527 ---LVERGWGYFR---MMFDEFGMDPRVEHYACMVDILSRAGKLKEA 567
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 137/237 (57%), Gaps = 12/237 (5%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IRPS T+ G+I+ACS L + G++VHD++L + + + +++MY KC S+ DAR
Sbjct: 306 IRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDAR 365
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
GFD + + ++V WT+MI G QN + DA+ LY +M G++P + T S++KACS L
Sbjct: 366 KGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLA 425
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G+Q+HA +K G + +AL MY K + D VF + +DV SW +MI+
Sbjct: 426 ALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMIS 485
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNE 258
S+ G EAL F EM G +P+ F ++ SACS+ + R++F+E
Sbjct: 486 GLSQNGCGKEALELFEEMQLEGT-KPDYVTFVNILSACSHMGLVERGWGYFRMMFDE 541
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 201/461 (43%), Gaps = 45/461 (9%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S Q L EAL + + + ++SA + + G+++H + +
Sbjct: 181 ISGYASQKLAAEALGLFRLMRREEEGE-NEFVFTSVLSALTLPELVNNGKQIHCIAVKNG 239
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
V + N ++ MY KCGSL+DA F+ +N ++W+AMI G +Q+ + A+KL+
Sbjct: 240 LLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFS 299
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M SG+ P +FTF +I ACS LG+ G+Q+H +++K S + AL+ MY K
Sbjct: 300 SMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCS 359
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I+DAR F + D+ W SMI + + G +AL + M G PNE SV
Sbjct: 360 SIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGIL-PNELTMASVL 418
Query: 246 SACSNFA----------------------------------------RILFNEIDSPDLA 265
ACS+ A ++F + + D+
Sbjct: 419 KACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVI 478
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SWNA+I+G++ + EA+ LF EM+ PD +T ++L AC + +G +
Sbjct: 479 SWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMM 538
Query: 326 I-KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
+ G D V ++ + ++ L A+ + + W I+ AC + E
Sbjct: 539 FDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYEL 598
Query: 385 LFRLFSRM--LASQIKPDHITFNDVMGACAKMASLEMVTQL 423
++ L SQ ++ + + A + +E V ++
Sbjct: 599 GAYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRM 639
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 134/285 (47%), Gaps = 8/285 (2%)
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
LP + + L +L +G +H+ IIK S V + N+++ +YAKC L A
Sbjct: 3 LPSNRSFFTALLQYTHNRSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKF 61
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQ--AEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
VF+ + +N D VSWN II QH + + LF RM A P+ TF V A +
Sbjct: 62 VFERI-QNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAST 120
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ H K DVFV + LM++Y K G ARK+F+ M + VSW+++
Sbjct: 121 LVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATM 180
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I GYA EAL LF MR N VL+A + LV G ++ I G
Sbjct: 181 ISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKN-G 239
Query: 534 IIPTREHCSCVVDLLARAGCVHEA-EDFINQMACDADIVVWKSLL 577
++ + +V + A+ G + +A + F + + D + + W +++
Sbjct: 240 LLSIVSVGNALVTMYAKCGSLDDALQTF--ETSSDKNSITWSAMI 282
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 280/552 (50%), Gaps = 43/552 (7%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
Q D+ N L K G L +AR FDKM Q++ +SWT +I+G ++A+ L+
Sbjct: 46 QTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKN 105
Query: 127 M-LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M ++SG+ F KAC V G LH + +K+ + + +AL+ MYTK
Sbjct: 106 MRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNG 165
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+I + R VF + ++V SW ++I + GY EAL +F+EM + + + F
Sbjct: 166 KIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWR-SRVEYDSYTFAIAL 224
Query: 246 SACS-----NFAR-----------------------------------ILFNEIDSPDLA 265
AC+ N+ R LF ++ D+
Sbjct: 225 KACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVV 284
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW +I + A+ F MR+ ++ P+ T +++ C + G Q+H+ I
Sbjct: 285 SWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALI 344
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
+ +G +++ V N+I+TMYAKC L ++ ++F E+ + D VSW++IIA Q E
Sbjct: 345 LHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRR-DIVSWSTIIAGYSQGGHVSEA 403
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
F L S M KP V+ AC MA LE QLH Y+ GL V++ L+++
Sbjct: 404 FELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINM 463
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y KCGS+ A ++F+ EN D+VSW+++I GYA+ G E + LF ++ +G+ P+ VT
Sbjct: 464 YCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTF 523
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
+GVL+ACSH GLV+ G + M +Y I P++EH C++DLL RAG + +AE I M
Sbjct: 524 IGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMP 583
Query: 566 CDADIVVWKSLL 577
D VVW +LL
Sbjct: 584 FHRDDVVWSTLL 595
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 142/538 (26%), Positives = 244/538 (45%), Gaps = 46/538 (8%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S N +EAL+ + + + +RI P + AC + G +H + + +
Sbjct: 87 ISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTG 146
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
V + + +L+MY K G + + R F +MP RNVVSWTA+I G + +A+ +
Sbjct: 147 LVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFS 206
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M +S V +TF +KAC+ G++ GR++HA +K N L MY K
Sbjct: 207 EMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCG 266
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
++ +F ++ +DV SW ++I ++G E A+ F M PNE+ F +V
Sbjct: 267 KLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRM-RESDVSPNEYTFAAVI 325
Query: 246 SACSNFARI----------------------------------------LFNEIDSPDLA 265
S C+N ARI +F+E+ D+
Sbjct: 326 SGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIV 385
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW+ +IAG + + +EA L S MR P + S+L AC L G Q+H+Y+
Sbjct: 386 SWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYV 445
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
+ +G + V +A++ MY KC + A +F + +N D VSW ++I +H + E+
Sbjct: 446 LSIGLEHTAMVLSALINMYCKCGSIEEASRIF-DAAENDDIVSWTAMINGYAEHGYSREV 504
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG-LMD 444
LF ++ ++PD +TF V+ AC+ +++ + ++K G ++D
Sbjct: 505 IDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMID 564
Query: 445 IYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
+ + G L A + M + D V WS+L+ G + + T R L + PN
Sbjct: 565 LLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRR--TAERILQLEPN 620
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 202/455 (44%), Gaps = 70/455 (15%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
YN+ + Y + + T+A + AC+ +L GR++H + + N
Sbjct: 197 YNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVAN 256
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
+ MY KCG LE F+KM R+VVSWT +I Q QE A++ +I+M +S V P
Sbjct: 257 TLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSP 316
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
++TF ++I C+ L + G QLHA ++ + L +N+++ MY K ++ + +F
Sbjct: 317 NEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIF 376
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
+ R+D+ SW ++IA +S+ G+ EA + M G +P EF SV SAC N A +
Sbjct: 377 HEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGP-KPTEFALASVLSACGNMAIL 435
Query: 255 ----------------------------------------LFNEIDSPDLASWNALIAGV 274
+F+ ++ D+ SW A+I G
Sbjct: 436 EHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGY 495
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF---- 330
A H + E + LF ++ L PD +T +L AC H+ ++ +GF
Sbjct: 496 AEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSAC-----------SHAGLVDLGFRYFN 544
Query: 331 --------DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ ++ + + L +A + + + + D V W++++ AC H
Sbjct: 545 AMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDV 604
Query: 383 EELFRLFSRMLASQIKPD----HITFNDVMGACAK 413
E R R+L Q++P+ HIT ++ + K
Sbjct: 605 ERGRRTAERIL--QLEPNCAGTHITLANIYASKGK 637
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 164/332 (49%), Gaps = 12/332 (3%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC---- 307
AR +F+++ D SW LI+G + ++++EA+ LF MR + GL + +
Sbjct: 68 ARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR----VESGLRIDPFILSLAH 123
Query: 308 -ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
AC + G +H Y +K G ++V V +A+L MY K + VF E+ +
Sbjct: 124 KACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR-NV 182
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
VSW +II ++ +E FS M S+++ D TF + ACA +L ++H
Sbjct: 183 VSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQ 242
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
K G FV N L +Y KCG L LF M DVVSW+++I Q G + A
Sbjct: 243 AMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECA 302
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
++ F RMR VSPN T V++ C+++ +E G L+ ++ + G+ + + ++
Sbjct: 303 VQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILH-LGLAASLSVENSIMT 361
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ A+ G + + ++M DIV W +++A
Sbjct: 362 MYAKCGQLTSSSVIFHEMT-RRDIVSWSTIIA 392
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 189/601 (31%), Positives = 301/601 (50%), Gaps = 45/601 (7%)
Query: 21 AYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
A DF ++ + + PS+ + L L +++L R +H ++ V N +++
Sbjct: 214 AVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV--SNGLID 271
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
+Y KCG ++ AR FD+M ++ VSW M+AG + N + ++L+ +M V + +
Sbjct: 272 LYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVS 331
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
S A + + G+++H ++ S ++ L+ MY K A+ +F G+
Sbjct: 332 AVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQ 391
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------- 251
+D+ +W ++IAA + GY EAL F EM + +PN S+ AC++
Sbjct: 392 GRDLVAWSAIIAALVQTGYPEEALSLFQEM-QNQKMKPNRVTLMSILPACADLSLLKLGK 450
Query: 252 ---------------------------------ARILFNEIDSPDLASWNALIAGVASHS 278
A FN + S D+ +WN+LI G A
Sbjct: 451 SIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIG 510
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
+ A+ +F ++R + PD T+ ++ AC L QG +H I+K+GF+S+ V N
Sbjct: 511 DPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKN 570
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
A++ MYAKC L +A +F + D V+WN IIAA +Q+ A+E F +M
Sbjct: 571 ALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFH 630
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
P+ +TF V+ A A +A+ H I + G + V N L+D+Y KCG L + KL
Sbjct: 631 PNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKL 690
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
FN M++ D VSW++++ GYA G GD A+ LF+ M+ V + V+ V VL+AC H GLV
Sbjct: 691 FNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLV 750
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
EEG ++ M ++Y I P EH +C+VDLL RAG E FI M + D VW +LL
Sbjct: 751 EEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLG 810
Query: 579 S 579
S
Sbjct: 811 S 811
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 184/616 (29%), Positives = 299/616 (48%), Gaps = 46/616 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + + + YNEAL Y + + T+ ++ AC+ +LQ G H I
Sbjct: 98 NSMIRAYTRSKQYNEALEMY-YCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEID 156
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ DV + +++MY K G L+ AR FDKMP+R+VV+W AMIAG SQ+ +A+
Sbjct: 157 RRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVD 216
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ M GV P + ++ L ++ L R +H +V + + S + N LI +Y+
Sbjct: 217 FFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV--SNGLIDLYS 274
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM-------------- 228
K + AR VF + +D SWG+M+A ++ G +E L F++M
Sbjct: 275 KCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVS 334
Query: 229 ----------------LHHGAYQ---PNEFIFGS----VFSAC--SNFARILFNEIDSPD 263
+H A Q ++ + + +++ C + A+ LF + D
Sbjct: 335 AFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRD 394
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
L +W+A+IA + EA+SLF EM+++++ P+ +T+ S+L AC L G +H
Sbjct: 395 LVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHC 454
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ +K DS++ A+++MYAKC AL F + D V+WNS+I Q
Sbjct: 455 FTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLINGYAQIGDPY 513
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
+F ++ S I PD T V+ ACA + L+ T +H I K G D V N L+
Sbjct: 514 NAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALI 573
Query: 444 DIYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
D+Y KCGSL SA LFN + D V+W+ +I Y Q G EA+ F +MR PN
Sbjct: 574 DMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNS 633
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
VT V VL A +++ EG+ + + + G + + ++D+ A+ G + +E N
Sbjct: 634 VTFVSVLPAAAYLAAFREGMAFHACI-IQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFN 692
Query: 563 QMACDADIVVWKSLLA 578
+M D V W ++L+
Sbjct: 693 EMD-HKDTVSWNAMLS 707
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 162/607 (26%), Positives = 297/607 (48%), Gaps = 45/607 (7%)
Query: 11 KQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
+++ + A A +F +++ Y L+S+C L L ++H I++S +
Sbjct: 8 RRSFTSIATAASEFPSLSSSTYTNYLHYPRLLSSCKHLNPLL---QIHAQIIVSGFKHHH 64
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ H++N+Y + AR FD P + + W +MI +++ Q N+A+++Y M++
Sbjct: 65 SI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEK 123
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G+ P ++TF ++KAC+G ++ G H + + + L+ MY+K + A
Sbjct: 124 GLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRA 183
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF----------- 239
R VF + ++DV +W +MIA S+ EA+ F M G +P+
Sbjct: 184 REVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGV-EPSSVSLLNLFPGICK 242
Query: 240 ---------IFGSVF-----SACSN-------------FARILFNEIDSPDLASWNALIA 272
I G VF SA SN AR +F+++ D SW ++A
Sbjct: 243 LSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMA 302
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A + E + LF +M+ + + ++ S A + L +G ++H ++ DS
Sbjct: 303 GYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDS 362
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
++ V ++ MYAKC A +F L + D V+W++IIAA +Q EE LF M
Sbjct: 363 DILVATPLMVMYAKCGETEKAKQLFWGL-QGRDLVAWSAIIAALVQTGYPEEALSLFQEM 421
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
++KP+ +T ++ ACA ++ L++ +HC+ K + D+ L+ +Y KCG
Sbjct: 422 QNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFF 481
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
+A FN M + D+V+W+SLI GYAQ G A+ +F ++R ++P+ T+VGV+ AC
Sbjct: 482 TAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPAC 541
Query: 513 SHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
+ + +++G ++ ++ + G + ++D+ A+ G + AE N+ D V
Sbjct: 542 ALLNDLDQGTCIHGLIV-KLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVT 600
Query: 573 WKSLLAS 579
W ++A+
Sbjct: 601 WNVIIAA 607
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 194/422 (45%), Gaps = 48/422 (11%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILL 63
+++L + EAL + QN +++P+ T ++ AC+ L L+LG+ +H +
Sbjct: 402 IAALVQTGYPEEALSLFQEMQNQ---KMKPNRVTLMSILPACADLSLLKLGKSIHCFTVK 458
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
+ D+ +++MY KCG A F++M R++V+W ++I G +Q +AI +
Sbjct: 459 ADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDM 518
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ ++ S + P T ++ AC+ L + G +H ++K S +NALI MY K
Sbjct: 519 FYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAK 578
Query: 184 FDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
+ A +F+ KD +W +IAA+ + G+ EA+ F++M + PN F
Sbjct: 579 CGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLEN-FHPNSVTFV 637
Query: 243 SVFSACS----------------------------------------NFARILFNEIDSP 262
SV A + +++ LFNE+D
Sbjct: 638 SVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHK 697
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV- 321
D SWNA+++G A H + + A++LFS M++ ++ D ++ S+L AC + +G ++
Sbjct: 698 DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIF 757
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
HS K ++ ++ + + + L K + D+ W +++ +C H+
Sbjct: 758 HSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSN 817
Query: 382 AE 383
+
Sbjct: 818 VK 819
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 194/582 (33%), Positives = 299/582 (51%), Gaps = 41/582 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
++Y ++ C+ +SL+ G++VH I+ + D L ++ MY CG L R FDK
Sbjct: 370 NSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDK 429
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ V W +++ ++ +++ L+ +M + GV+ +TF ++K + LG V
Sbjct: 430 IMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKEC 489
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+++H +V+K GS+ N+LIA Y KF + A N+F ++ DV SW SMI
Sbjct: 490 KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVN 549
Query: 216 GYELEALCHFNEML-----------------------------HHG----AYQPNEFIFG 242
G+ L F +ML HG A E +F
Sbjct: 550 GFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFS 609
Query: 243 S----VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+ ++S C N A +F ++ + SW + IA ++A+ LF EM+ + +
Sbjct: 610 NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVR 669
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD TV S++ AC +L +G VHSY+IK G SN+PV NA++ MYAKC + A LV
Sbjct: 670 PDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLV 729
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F ++ D VSWN++I Q++ E LF M Q KPD IT V+ ACA +A+
Sbjct: 730 FSKI-PVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAA 787
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L+ ++H +I + G D+ V L+D+Y KCG L A+ LF+ + D++SW+ +I G
Sbjct: 788 LDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAG 847
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y G G+EA+ F MR G+ P+ + +L ACSH GL+ EG + M NE G+ P
Sbjct: 848 YGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEP 907
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
EH +CVVDLLAR G + +A FI M D +W LL+
Sbjct: 908 KLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLS 949
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 149/317 (47%), Gaps = 15/317 (4%)
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH-SLLCACIGRLTLYQGMQVHSYII 326
NA I + A+ L ++ + EL GL + S+L C + +L G +VHS II
Sbjct: 340 NAKINKFCEMGDLRNAIELLTKSKSYEL---GLNSYCSVLQLCAEKKSLEDGKRVHSVII 396
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
G + + ++ MY C L +F ++ N WN +++ + E
Sbjct: 397 SNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI-MNDKVFLWNLLMSEYAKIGNFRESV 455
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
LF +M + + TF V+ A + ++ ++H Y+ K G + V+N L+ Y
Sbjct: 456 SLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAY 515
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
K G + SA LF+ + PDVVSW+S+I G G L++F +M LGV +L TLV
Sbjct: 516 FKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLV 575
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH----CSCVVDLLARAGCVHEAEDFIN 562
VL A +++G + G L+ +G+ + ++D+ ++ G ++ A +
Sbjct: 576 SVLVAWANIGNLSLGRALH-----GFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFV 630
Query: 563 QMACDADIVVWKSLLAS 579
+M D IV W S +A+
Sbjct: 631 KMG-DTTIVSWTSTIAA 646
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 192/598 (32%), Positives = 315/598 (52%), Gaps = 53/598 (8%)
Query: 33 IRP---STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
IRP T++ L+ +C R +LG+ VH ++ +PD VL N ++++Y K G A
Sbjct: 57 IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKA 116
Query: 90 RMGFDKMP---QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
F+ M +R+VVSW+AM+A N +E DAIK++++ L+ G++P + + ++I+AC
Sbjct: 117 EDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRAC 176
Query: 147 SGLGSVCLGRQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILD-ARNVFSGIARKDVTS 204
S V +GR ++K+ H S + +LI M+ K + + A VF ++ +V +
Sbjct: 177 SNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVT 236
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------ 252
W MI ++G+ EA+ F +M+ G ++ ++F SVFSAC+
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSG-FESDKFTLSSVFSACAELENLSLGKQLHSWA 295
Query: 253 -----------------------------RILFNEIDSPDLASWNALIAGVASHSN-ANE 282
R +F+ ++ + SW ALI G + N A E
Sbjct: 296 IRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATE 355
Query: 283 AMSLFSEMRDR-ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
A++LFSEM + + P+ T S AC G QV K G SN V N+++
Sbjct: 356 AINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVI 415
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+M+ K + +A F+ L + + VS+N+ + ++ E+ F+L S + ++
Sbjct: 416 SMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSA 474
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
TF ++ A + S+ Q+H + K GL+ + V N L+ +Y KCGS+ +A ++FNF
Sbjct: 475 FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNF 534
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
MEN +V+SW+S+I G+A+ G L+ F +M GV PN VT V +L+ACSHVGLV EG
Sbjct: 535 MENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEG 594
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ M ++ I P EH +C+VDLL RAG + +A +FIN M AD++VW++ L +
Sbjct: 595 WRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 185/404 (45%), Gaps = 52/404 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC---GSLEDARMGF 93
T + + SAC+ L +L LG+++H + S DV + +++MY KC GS++D R F
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVF 328
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQ-ENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGS 151
D+M +V+SWTA+I G +N +AI L+ +M+ G V P FTF S KAC L
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+G+Q+ K S+ N++I+M+ K DR+ DA+ F ++ K++ S+ + +
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 448
Query: 212 FSK-LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------- 254
+ L +E +A +E+ + F F S+ S +N I
Sbjct: 449 TCRNLNFE-QAFKLLSEITER-ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLS 506
Query: 255 ------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+FN +++ ++ SW ++I G A H A + F++M
Sbjct: 507 CNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQM 566
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
+ + P+ +T ++L AC + +G + +S + ++ + + +
Sbjct: 567 IEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGL 626
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
L +A + AD + W + + AC H+ EL +L +R +
Sbjct: 627 LTDAFEFINTMPFQADVLVWRTFLGACRVHSNT-ELGKLAARKI 669
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 128/240 (53%), Gaps = 5/240 (2%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
NL EA+ FS+ T + P+ T++ AC +L ++G++V +
Sbjct: 351 NLATEAINL--FSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 408
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ N +++M+ K +EDA+ F+ + ++N+VS+ + G +N A KL ++ +
Sbjct: 409 SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
+ FTF S++ + +GS+ G Q+H+ V+K + NALI+MY+K I A
Sbjct: 469 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
VF+ + ++V SW SMI F+K G+ + L FN+M+ G +PNE + ++ SACS+
Sbjct: 529 SRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGV-KPNEVTYVAILSACSH 587
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 184/574 (32%), Positives = 300/574 (52%), Gaps = 45/574 (7%)
Query: 49 RSLQLGRKVHDHIL-LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAM 107
+SLQ GR +H I+ L+ + L N ++N Y KC L A++ FD++ ++V+SW +
Sbjct: 21 KSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCL 80
Query: 108 IAGCSQNYQENDA--IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS 165
I G SQ + ++L+ +M ++P TF I A S L S+ G+Q HA IK
Sbjct: 81 INGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKM 140
Query: 166 EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHF 225
+ ++L+ MY K + +AR VF + ++ +W +MI+ ++ EA F
Sbjct: 141 ACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVF 200
Query: 226 NEMLHHGAYQPNEFIFGSVFSACSN---------------------FARIL--------- 255
E++ NEF F SV SA + F IL
Sbjct: 201 -ELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAK 259
Query: 256 ----------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
F + + +W+A+I G A ++++A+ LFS M + P T+ +
Sbjct: 260 CGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGV 319
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
L AC + +G QVH+Y++K+GF+S + + A++ MYAK V +A F L + D
Sbjct: 320 LNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYL-QQPD 378
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
V W S+IA +Q+ + E+ L+ RM I P+ +T V+ AC+ +A+ + Q+H
Sbjct: 379 LVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHA 438
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
K GL +V + + L +Y KCG+L +F M D++SW+++I G +Q G G E
Sbjct: 439 RTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKE 498
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
AL+LF MR P+ VT V VL+ACSH+GLV+ G +R+M +E+G++P EH +C+V
Sbjct: 499 ALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMV 558
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
D+L+RAG ++EA++FI D + +W+ LL +
Sbjct: 559 DVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGA 592
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 207/426 (48%), Gaps = 42/426 (9%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
NI T++G+ +A S+L S+ G++ H + C DV + + +LNMY K G L +A
Sbjct: 106 NILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEA 165
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD+MP+RN V+W MI+G + +A +++ M + +F F S++ A +
Sbjct: 166 REVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVP 225
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
V G+Q+H +K+ L NAL+ MY K + D+ VF K+ +W +MI
Sbjct: 226 EFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMI 285
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------ 251
+++ G +AL F+ M H P+EF V +ACS+
Sbjct: 286 TGYAQSGDSHKALKLFSRM-HFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGF 344
Query: 252 ----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
AR FN + PDL W ++IAG + +A+SL+
Sbjct: 345 ESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCR 404
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M+ +LP+ LT+ S+L AC QG Q+H+ IK G V + +A+ TMYAKC
Sbjct: 405 MQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGN 464
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L +VF+ + + D +SWN++I+ Q+ +E LF M KPD +TF +V+
Sbjct: 465 LEEGNIVFRRMPER-DIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLS 523
Query: 410 ACAKMA 415
AC+ M
Sbjct: 524 ACSHMG 529
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 136/238 (57%), Gaps = 12/238 (5%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I PS T G+++ACS +++ G++VH+++L + + + +++MY K G EDAR
Sbjct: 309 INPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDAR 368
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
GF+ + Q ++V WT+MIAG QN + DA+ LY +M G++P + T S++KACS L
Sbjct: 369 KGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLA 428
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ GRQ+HA IK G + +AL MY K + + VF + +D+ SW +MI+
Sbjct: 429 AFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMIS 488
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNEI 259
S+ GY EAL F EM +P++ F +V SACS+ + R++F+E
Sbjct: 489 GLSQNGYGKEALELFEEMRQQDT-KPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEF 545
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 180/585 (30%), Positives = 303/585 (51%), Gaps = 42/585 (7%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P ++ ++SAC + SL++G ++H +L D + N ++++Y G+L A F
Sbjct: 248 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 307
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
M QR+ V++ +I G SQ A++L+ +M G+ P T S++ ACS G++
Sbjct: 308 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 367
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+QLHA+ K S+ + AL+ +Y K I A + F ++V W M+ A+
Sbjct: 368 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 427
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE---------------- 258
L + F +M PN++ + S+ C + E
Sbjct: 428 LDDLRNSFRIFRQM-QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY 486
Query: 259 -----ID-------------------SPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
ID D+ SW +IAG ++ ++A++ F +M DR
Sbjct: 487 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 546
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ D + + + + AC G L +G Q+H+ GF S++P NA++T+Y++C + +
Sbjct: 547 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 606
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
L F++ + D+++WN++++ Q EE R+F RM I ++ TF + A ++
Sbjct: 607 LAFEQT-EAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 665
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
A+++ Q+H ITKTG + V N L+ +Y KCGS+ A K F + + VSW+++I
Sbjct: 666 ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 725
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
Y++ G G EAL F +M V PN VTLVGVL+ACSH+GLV++G+ + M +EYG+
Sbjct: 726 NAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGL 785
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P EH CVVD+L RAG + A++FI +M D +VW++LL++
Sbjct: 786 SPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 830
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 173/599 (28%), Positives = 278/599 (46%), Gaps = 52/599 (8%)
Query: 25 SQNNTNIRIRPSTYAGLISAC-SSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
S N IR T L+ C + SL GRK+H IL + L + + Y
Sbjct: 34 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 93
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G L A FD+MP+R + +W MI + + L+++M+ V P + TF ++
Sbjct: 94 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 153
Query: 144 KACSGLGSVCLG--RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
+AC G GSV Q+HA ++ + N LI +Y++ + AR VF G+ KD
Sbjct: 154 EACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 212
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------- 251
+SW +MI+ SK E EA+ F +M G P + F SV SAC
Sbjct: 213 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGI-MPTPYAFSSVLSACKKIESLEIGEQLH 271
Query: 252 ------------------------------ARILFNEIDSPDLASWNALIAGVASHSNAN 281
A +F+ + D ++N LI G++
Sbjct: 272 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 331
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
+AM LF M L PD T+ SL+ AC TL++G Q+H+Y K+GF SN + A+L
Sbjct: 332 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL 391
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+YAKC+ + AL F E + + V WN ++ A + FR+F +M +I P+
Sbjct: 392 NLYAKCADIETALDYFLET-EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 450
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
T+ ++ C ++ LE+ Q+H I KT + +V + L+D+Y K G L +A +
Sbjct: 451 YTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 510
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
DVVSW+++I GY Q+ D+AL F +M G+ + V L ++AC+ + ++EG
Sbjct: 511 FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 570
Query: 522 --LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+H + +P + + +V L +R G + E+ Q D + W +L++
Sbjct: 571 QQIHAQACVSGFSSDLPFQ---NALVTLYSRCGKIEESYLAFEQTEA-GDNIAWNALVS 625
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/617 (25%), Positives = 294/617 (47%), Gaps = 48/617 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLR-SLQLGRKVHDHI 61
N + L +NL E + + N+ T++G++ AC + + ++H I
Sbjct: 115 NKMIKELASRNLIGEVFGLF-VRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARI 173
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
L + V+ N ++++Y + G ++ AR FD + ++ SW AMI+G S+N E +AI
Sbjct: 174 LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAI 233
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+L+ M G+MP + F S++ AC + S+ +G QLH V+K S NAL+++Y
Sbjct: 234 RLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLY 293
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
++ A ++FS ++++D ++ ++I S+ GY +A+ F M H +P+
Sbjct: 294 FHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM-HLDGLEPDSNTL 352
Query: 242 GSVFSACSNFARIL----------------------------------------FNEIDS 261
S+ ACS + F E +
Sbjct: 353 ASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV 412
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
++ WN ++ + + +F +M+ E++P+ T S+L CI L G Q+
Sbjct: 413 ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQI 472
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL-LVFKELGKNADSVSWNSIIAACLQHN 380
HS IIK F N VC+ ++ MYAK L A ++ + GK D VSW ++IA Q+N
Sbjct: 473 HSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK--DVVSWTTMIAGYTQYN 530
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
++ F +ML I+ D + + + ACA + +L+ Q+H +G + D+ N
Sbjct: 531 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN 590
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+ +Y +CG + + F E D ++W++L+ G+ Q G +EAL++F RM G+
Sbjct: 591 ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN 650
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
N T + A S +++G ++ ++ + G E C+ ++ + A+ G + +AE
Sbjct: 651 NNFTFGSAVKAASETANMKQGKQVHAVI-TKTGYDSETEVCNALISMYAKCGSISDAEKQ 709
Query: 561 INQMACDADIVVWKSLL 577
+++ + V W +++
Sbjct: 710 FLEVSTKNE-VSWNAII 725
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 150/279 (53%), Gaps = 14/279 (5%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+SAC+ L++L+ G+++H +S D+ QN ++ +Y +CG +E++ + F++ +
Sbjct: 558 VSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN 617
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
++W A+++G Q+ +A++++++M + G+ FTFGS +KA S ++ G+Q+HA
Sbjct: 618 IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAV 677
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
+ K+ + S NALI+MY K I DA F ++ K+ SW ++I A+SK G+ EA
Sbjct: 678 ITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEA 737
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEID-----SPDLASWNALI 271
L F++M+H +PN V SACS+ + F ++ SP + ++
Sbjct: 738 LDSFDQMIHSNV-RPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVV 796
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+ + A EM + PD L +LL AC+
Sbjct: 797 DMLTRAGLLSRAKEFIQEM---PIKPDALVWRTLLSACV 832
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 187/423 (44%), Gaps = 54/423 (12%)
Query: 14 LYNEALVAY---DFSQNNTNI-------RIRPS--TYAGLISACSSLRSLQLGRKVHDHI 61
L+N LVAY D +N+ I I P+ TY ++ C L L+LG ++H I
Sbjct: 417 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 476
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ + Q + + + +++MY K G L+ A + ++VVSWT MIAG +Q ++ A+
Sbjct: 477 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 536
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+ QML G+ + + + AC+GL ++ G+Q+HA S S L QNAL+ +Y
Sbjct: 537 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 596
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
++ +I ++ F D +W ++++ F + G EAL F M G N F F
Sbjct: 597 SRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI-DNNNFTF 655
Query: 242 GSVFSACSNFARI----------------------------------------LFNEIDS 261
GS A S A + F E+ +
Sbjct: 656 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 715
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ- 320
+ SWNA+I + H +EA+ F +M + P+ +T+ +L AC + +G+
Sbjct: 716 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 775
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
S + G ++ M + +L A +E+ D++ W ++++AC+ H
Sbjct: 776 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 835
Query: 381 QAE 383
E
Sbjct: 836 NME 838
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%)
Query: 11 KQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
+Q+ NE + N I T+ + A S +++ G++VH I + +
Sbjct: 628 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 687
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ N +++MY KCGS+ DA F ++ +N VSW A+I S++ ++A+ + QM+ S
Sbjct: 688 EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHS 747
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLG 155
V P T ++ ACS +G V G
Sbjct: 748 NVRPNHVTLVGVLSACSHIGLVDKG 772
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 189/601 (31%), Positives = 301/601 (50%), Gaps = 45/601 (7%)
Query: 21 AYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
A DF ++ + + PS+ + L L +++L R +H ++ V N +++
Sbjct: 214 AVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV--SNGLID 271
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
+Y KCG ++ AR FD+M ++ VSW M+AG + N + ++L+ +M V + +
Sbjct: 272 LYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVS 331
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
S A + + G+++H ++ S ++ L+ MY K A+ +F G+
Sbjct: 332 AVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQ 391
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------- 251
+D+ +W ++IAA + GY EAL F EM + +PN S+ AC++
Sbjct: 392 GRDLVAWSAIIAALVQTGYPEEALSLFQEM-QNQKMKPNRVTLMSILPACADLSLLKLGK 450
Query: 252 ---------------------------------ARILFNEIDSPDLASWNALIAGVASHS 278
A FN + S D+ +WN+LI G A
Sbjct: 451 SIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIG 510
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
+ A+ +F ++R + PD T+ ++ AC L QG +H I+K+GF+S+ V N
Sbjct: 511 DPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKN 570
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
A++ MYAKC L +A +F + D V+WN IIAA +Q+ A+E F +M
Sbjct: 571 ALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFH 630
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
P+ +TF V+ A A +A+ H I + G + V N L+D+Y KCG L + KL
Sbjct: 631 PNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKL 690
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
FN M++ D VSW++++ GYA G GD A+ LF+ M+ V + V+ V VL+AC H GLV
Sbjct: 691 FNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLV 750
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
EEG ++ M ++Y I P EH +C+VDLL RAG E FI M + D VW +LL
Sbjct: 751 EEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLG 810
Query: 579 S 579
S
Sbjct: 811 S 811
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 184/616 (29%), Positives = 299/616 (48%), Gaps = 46/616 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + + + YNEAL Y + + T+ ++ AC+ +LQ G H I
Sbjct: 98 NSMIRAYTRSKQYNEALEMY-YCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEID 156
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ DV + +++MY K G L+ AR FDKMP+R+VV+W AMIAG SQ+ +A+
Sbjct: 157 RRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVD 216
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ M GV P + ++ L ++ L R +H +V + + S + N LI +Y+
Sbjct: 217 FFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV--SNGLIDLYS 274
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM-------------- 228
K + AR VF + +D SWG+M+A ++ G +E L F++M
Sbjct: 275 KCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVS 334
Query: 229 ----------------LHHGAYQ---PNEFIFGS----VFSAC--SNFARILFNEIDSPD 263
+H A Q ++ + + +++ C + A+ LF + D
Sbjct: 335 AFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRD 394
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
L +W+A+IA + EA+SLF EM+++++ P+ +T+ S+L AC L G +H
Sbjct: 395 LVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHC 454
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ +K DS++ A+++MYAKC AL F + D V+WNS+I Q
Sbjct: 455 FTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLINGYAQIGDPY 513
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
+F ++ S I PD T V+ ACA + L+ T +H I K G D V N L+
Sbjct: 514 NAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALI 573
Query: 444 DIYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
D+Y KCGSL SA LFN + D V+W+ +I Y Q G EA+ F +MR PN
Sbjct: 574 DMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNS 633
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
VT V VL A +++ EG+ + + + G + + ++D+ A+ G + +E N
Sbjct: 634 VTFVSVLPAAAYLAAFREGMAFHACI-IQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFN 692
Query: 563 QMACDADIVVWKSLLA 578
+M D V W ++L+
Sbjct: 693 EMD-HKDTVSWNAMLS 707
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 159/580 (27%), Positives = 286/580 (49%), Gaps = 45/580 (7%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y L+S+C L L ++H I++S + + H++N+Y + AR FD P
Sbjct: 35 YPRLLSSCKHLNPLL---QIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTP 90
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+ + W +MI +++ Q N+A+++Y M++ G+ P ++TF ++KAC+G ++ G
Sbjct: 91 NPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVW 150
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
H + + + L+ MY+K + AR VF + ++DV +W +MIA S+
Sbjct: 151 FHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSED 210
Query: 218 ELEALCHFNEMLHHGAYQPNEF--------------------IFGSVF-----SACSN-- 250
EA+ F M G +P+ I G VF SA SN
Sbjct: 211 PCEAVDFFRSMQLVGV-EPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGL 269
Query: 251 -----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
AR +F+++ D SW ++AG A + E + LF +M+ + +
Sbjct: 270 IDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINK 329
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
++ S A + L +G ++H ++ DS++ V ++ MYAKC A +F
Sbjct: 330 VSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWG 389
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
L + D V+W++IIAA +Q EE LF M ++KP+ +T ++ ACA ++ L++
Sbjct: 390 L-QGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL 448
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
+HC+ K + D+ L+ +Y KCG +A FN M + D+V+W+SLI GYAQ
Sbjct: 449 GKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQ 508
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTRE 539
G A+ +F ++R ++P+ T+VGV+ AC+ + +++G ++ ++ + G
Sbjct: 509 IGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIV-KLGFESDCH 567
Query: 540 HCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++D+ A+ G + AE N+ D V W ++A+
Sbjct: 568 VKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 196/422 (46%), Gaps = 48/422 (11%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILL 63
+++L + EAL + QN +++P+ T ++ AC+ L L+LG+ +H +
Sbjct: 402 IAALVQTGYPEEALSLFQEMQNQ---KMKPNRVTLMSILPACADLSLLKLGKSIHCFTVK 458
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
+ D+ +++MY KCG A F++M R++V+W ++I G +Q +AI +
Sbjct: 459 ADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDM 518
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ ++ S + P T ++ AC+ L + G +H ++K S +NALI MY K
Sbjct: 519 FYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAK 578
Query: 184 FDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
+ A +F+ KD +W +IAA+ + G+ EA+ F++M + PN F
Sbjct: 579 CGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLEN-FHPNSVTFV 637
Query: 243 SV---------------FSAC-------SN------------------FARILFNEIDSP 262
SV F AC SN ++ LFNE+D
Sbjct: 638 SVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHK 697
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV- 321
D SWNA+++G A H + + A++LFS M++ ++ D ++ S+L AC + +G ++
Sbjct: 698 DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIF 757
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
HS K ++ ++ + + + L K + D+ W +++ +C H+
Sbjct: 758 HSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSN 817
Query: 382 AE 383
+
Sbjct: 818 VK 819
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 192/598 (32%), Positives = 315/598 (52%), Gaps = 53/598 (8%)
Query: 33 IRP---STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
IRP T++ L+ +C R +LG+ VH ++ +PD VL N ++++Y K G A
Sbjct: 57 IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKA 116
Query: 90 RMGFDKMP---QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
F+ M +R+VVSW+AM+A N +E DAIK++++ L+ G++P + + ++I+AC
Sbjct: 117 EDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRAC 176
Query: 147 SGLGSVCLGRQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILD-ARNVFSGIARKDVTS 204
S V +GR ++K+ H S + +LI M+ K + + A VF ++ +V +
Sbjct: 177 SNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVT 236
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------ 252
W MI ++G+ EA+ F +M+ G ++ ++F SVFSAC+
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSG-FESDKFTLSSVFSACAELENLSLGKQLHSWA 295
Query: 253 -----------------------------RILFNEIDSPDLASWNALIAGVASHSN-ANE 282
R +F+ ++ + SW ALI G + N A E
Sbjct: 296 IRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATE 355
Query: 283 AMSLFSEMRDR-ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
A++LFSEM + + P+ T S AC G QV K G SN V N+++
Sbjct: 356 AINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVI 415
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+M+ K + +A F+ L + + VS+N+ + ++ E+ F+L S + ++
Sbjct: 416 SMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSA 474
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
TF ++ A + S+ Q+H + K GL+ + V N L+ +Y KCGS+ +A ++FNF
Sbjct: 475 FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNF 534
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
MEN +V+SW+S+I G+A+ G L+ F +M GV PN VT V +L+ACSHVGLV EG
Sbjct: 535 MENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEG 594
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ M ++ I P EH +C+VDLL RAG + +A +FIN M AD++VW++ L +
Sbjct: 595 WRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 179/394 (45%), Gaps = 51/394 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC---GSLEDARMGF 93
T + + SAC+ L +L LG+++H + S DV + +++MY KC GS++D R F
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVF 328
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQ-ENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGS 151
D+M +V+SWTA+I G +N +AI L+ +M+ G V P FTF S KAC L
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+G+Q+ K S+ N++I+M+ K DR+ DA+ F ++ K++ S+ + +
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 448
Query: 212 FSK-LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------- 254
+ L +E +A +E+ + F F S+ S +N I
Sbjct: 449 TCRNLNFE-QAFKLLSEITER-ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLS 506
Query: 255 ------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+FN +++ ++ SW ++I G A H A + F++M
Sbjct: 507 CNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQM 566
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
+ + P+ +T ++L AC + +G + +S + ++ + + +
Sbjct: 567 IEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGL 626
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L +A + AD + W + + AC H+ E
Sbjct: 627 LTDAFEFINTMPFQADVLVWRTFLGACRVHSNTE 660
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 128/240 (53%), Gaps = 5/240 (2%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
NL EA+ FS+ T + P+ T++ AC +L ++G++V +
Sbjct: 351 NLATEAINL--FSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 408
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ N +++M+ K +EDA+ F+ + ++N+VS+ + G +N A KL ++ +
Sbjct: 409 SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
+ FTF S++ + +GS+ G Q+H+ V+K + NALI+MY+K I A
Sbjct: 469 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
VF+ + ++V SW SMI F+K G+ + L FN+M+ G +PNE + ++ SACS+
Sbjct: 529 SRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGV-KPNEVTYVAILSACSH 587
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 181/585 (30%), Positives = 302/585 (51%), Gaps = 42/585 (7%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P ++ ++SAC + SL++G ++H +L D + N ++++Y G+L A F
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 347
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
M QR+ V++ +I G SQ A++L+ +M G+ P T S++ ACS G++
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+QLHA+ K S+ + AL+ +Y K I A + F ++V W M+ A+
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE---------------- 258
L + F +M PN++ + S+ C + E
Sbjct: 468 LDDLRNSFRIFRQM-QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY 526
Query: 259 -----ID-------------------SPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
ID D+ SW +IAG ++ ++A++ F +M DR
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ D + + + + AC G L +G Q+H+ GF S++P NA++T+Y++C + +
Sbjct: 587 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 646
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
L F E + D+++WN++++ Q EE R+F RM I ++ TF + A ++
Sbjct: 647 LAF-EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 705
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
A+++ Q+H ITKTG + V N L+ +Y KCGS+ A K F + + VSW+++I
Sbjct: 706 ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 765
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
Y++ G G EAL F +M V PN VTLVGVL+ACSH+GLV++G+ + M +EYG+
Sbjct: 766 NAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGL 825
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P EH CVVD+L RAG + A++FI +M D +VW++LL++
Sbjct: 826 SPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 173/599 (28%), Positives = 278/599 (46%), Gaps = 52/599 (8%)
Query: 25 SQNNTNIRIRPSTYAGLISAC-SSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
S N IR T L+ C + SL GRK+H IL + L + + Y
Sbjct: 74 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 133
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G L A FD+MP+R + +W MI + + L+++M+ V P + TF ++
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 144 KACSGLGSVCLG--RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
+AC G GSV Q+HA ++ + N LI +Y++ + AR VF G+ KD
Sbjct: 194 EACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 252
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------- 251
+SW +MI+ SK E EA+ F +M G P + F SV SAC
Sbjct: 253 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGI-MPTPYAFSSVLSACKKIESLEIGEQLH 311
Query: 252 ------------------------------ARILFNEIDSPDLASWNALIAGVASHSNAN 281
A +F+ + D ++N LI G++
Sbjct: 312 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
+AM LF M L PD T+ SL+ AC TL++G Q+H+Y K+GF SN + A+L
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL 431
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+YAKC+ + AL F E + + V WN ++ A + FR+F +M +I P+
Sbjct: 432 NLYAKCADIETALDYFLET-EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
T+ ++ C ++ LE+ Q+H I KT + +V + L+D+Y K G L +A +
Sbjct: 491 YTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 550
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
DVVSW+++I GY Q+ D+AL F +M G+ + V L ++AC+ + ++EG
Sbjct: 551 FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 610
Query: 522 --LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+H + +P + + +V L +R G + E+ Q D + W +L++
Sbjct: 611 QQIHAQACVSGFSSDLPFQ---NALVTLYSRCGKIEESYLAFEQTEA-GDNIAWNALVS 665
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/617 (25%), Positives = 294/617 (47%), Gaps = 48/617 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLR-SLQLGRKVHDHI 61
N + L +NL E + + N+ T++G++ AC + + ++H I
Sbjct: 155 NKMIKELASRNLIGEVFGLF-VRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARI 213
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
L + V+ N ++++Y + G ++ AR FD + ++ SW AMI+G S+N E +AI
Sbjct: 214 LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAI 273
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+L+ M G+MP + F S++ AC + S+ +G QLH V+K S NAL+++Y
Sbjct: 274 RLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLY 333
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
++ A ++FS ++++D ++ ++I S+ GY +A+ F M H +P+
Sbjct: 334 FHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM-HLDGLEPDSNTL 392
Query: 242 GSVFSACSNFARIL----------------------------------------FNEIDS 261
S+ ACS + F E +
Sbjct: 393 ASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV 452
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
++ WN ++ + + +F +M+ E++P+ T S+L CI L G Q+
Sbjct: 453 ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQI 512
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL-LVFKELGKNADSVSWNSIIAACLQHN 380
HS IIK F N VC+ ++ MYAK L A ++ + GK D VSW ++IA Q+N
Sbjct: 513 HSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK--DVVSWTTMIAGYTQYN 570
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
++ F +ML I+ D + + + ACA + +L+ Q+H +G + D+ N
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN 630
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+ +Y +CG + + F E D ++W++L+ G+ Q G +EAL++F RM G+
Sbjct: 631 ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN 690
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
N T + A S +++G ++ ++ + G E C+ ++ + A+ G + +AE
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVHAVI-TKTGYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 561 INQMACDADIVVWKSLL 577
+++ + V W +++
Sbjct: 750 FLEVSTKNE-VSWNAII 765
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 150/279 (53%), Gaps = 14/279 (5%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+SAC+ L++L+ G+++H +S D+ QN ++ +Y +CG +E++ + F++ +
Sbjct: 598 VSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN 657
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
++W A+++G Q+ +A++++++M + G+ FTFGS +KA S ++ G+Q+HA
Sbjct: 658 IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAV 717
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
+ K+ + S NALI+MY K I DA F ++ K+ SW ++I A+SK G+ EA
Sbjct: 718 ITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEA 777
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEID-----SPDLASWNALI 271
L F++M+H +PN V SACS+ + F ++ SP + ++
Sbjct: 778 LDSFDQMIHSNV-RPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVV 836
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+ + A EM + PD L +LL AC+
Sbjct: 837 DMLTRAGLLSRAKEFIQEM---PIKPDALVWRTLLSACV 872
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 187/423 (44%), Gaps = 54/423 (12%)
Query: 14 LYNEALVAY---DFSQNNTNI-------RIRPS--TYAGLISACSSLRSLQLGRKVHDHI 61
L+N LVAY D +N+ I I P+ TY ++ C L L+LG ++H I
Sbjct: 457 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ + Q + + + +++MY K G L+ A + ++VVSWT MIAG +Q ++ A+
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+ QML G+ + + + AC+GL ++ G+Q+HA S S L QNAL+ +Y
Sbjct: 577 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 636
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
++ +I ++ F D +W ++++ F + G EAL F M G N F F
Sbjct: 637 SRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI-DNNNFTF 695
Query: 242 GSVFSACSNFARI----------------------------------------LFNEIDS 261
GS A S A + F E+ +
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ- 320
+ SWNA+I + H +EA+ F +M + P+ +T+ +L AC + +G+
Sbjct: 756 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 815
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
S + G ++ M + +L A +E+ D++ W ++++AC+ H
Sbjct: 816 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 875
Query: 381 QAE 383
E
Sbjct: 876 NME 878
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%)
Query: 11 KQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
+Q+ NE + N I T+ + A S +++ G++VH I + +
Sbjct: 668 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 727
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ N +++MY KCGS+ DA F ++ +N VSW A+I S++ ++A+ + QM+ S
Sbjct: 728 EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHS 787
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLG 155
V P T ++ ACS +G V G
Sbjct: 788 NVRPNHVTLVGVLSACSHIGLVDKG 812
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 188/572 (32%), Positives = 295/572 (51%), Gaps = 57/572 (9%)
Query: 60 HILLSKCQP-------DVVLQNHILNMYGKC--GSLEDARMGFDKMPQRNVVSWTAMIAG 110
+I ++ CQ D+ N+IL+ Y +C G L A FD+M R+ V+W MI+G
Sbjct: 17 NIFITHCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISG 76
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
+ A +LY M G+MP +TFGSI+K + + +G+Q+H+ ++K + H
Sbjct: 77 YVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEH 136
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF------------------ 212
+ A +AL+ MY K +R+ DA VF I R++ SW ++IA F
Sbjct: 137 VYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEE 196
Query: 213 ------------------SKLGYELEALCHFNEMLHHGAYQPNEFIFGSV--FSACSNFA 252
K Y+L H +++ HG N ++ +S C +
Sbjct: 197 EGVRLDDGTFSPLLTLLDEKKFYKLTMQLH-CKIIKHGVQFDNTVCNATITSYSQCGSLE 255
Query: 253 ---RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
R+ + S DL +WN+++A +H A LF +M+ PD T +++ AC
Sbjct: 256 DAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISAC 315
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV--LCNALLVFKELGKNADSV 367
+ G +H +IK G + VP+CNA++ MY + S + +AL VF + ++ D V
Sbjct: 316 SHK---DNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSM-ESKDRV 371
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
SWNSI+ Q +E +LF M + + DH F+ V+ +C+ +A+L++ Q+H
Sbjct: 372 SWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLT 431
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K+G + FV + L+ +Y KCG + ARK F ++W+S++ YAQ G GD AL
Sbjct: 432 VKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVAL 491
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
LF +MR V + +T V LTACSH+GLVE+G +L + M ++YGI P EH +C VDL
Sbjct: 492 GLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDL 551
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
RAG + EA+ I M D D +VWK+LL +
Sbjct: 552 FGRAGYLDEAKALIESMPFDPDAMVWKTLLGA 583
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 154/578 (26%), Positives = 259/578 (44%), Gaps = 79/578 (13%)
Query: 21 AYDFSQNNTNIRIRPSTYA------GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
A++ ++ + + P Y G+ AC L +G++VH I+ + V +
Sbjct: 86 AWELYKSMKSFGLMPDAYTFGSILKGVACACR----LDVGQQVHSLIVKMGYEEHVYAGS 141
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
+L+MY KC + DA M F +P+RN VSW A+IAG + A L M + GV
Sbjct: 142 ALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRL 201
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL--IAQNALIAMYTKFDRILDARN 192
TF ++ L QLH +IK HG NA I Y++ + DA
Sbjct: 202 DDGTFSPLLTLLDEKKFYKLTMQLHCKIIK--HGVQFDNTVCNATITSYSQCGSLEDAER 259
Query: 193 VFSG-IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF 251
VF G + +D+ +W SM+AAF + A F +M G ++P+ + + ++ SACS+
Sbjct: 260 VFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFG-FEPDIYTYTTIISACSHK 318
Query: 252 ---------------------------------------ARILFNEIDSPDLASWNALIA 272
A +F+ ++S D SWN+++
Sbjct: 319 DNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILT 378
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G + ++ A+ LF MR + D ++L +C TL G Q+H +K GF+S
Sbjct: 379 GFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFES 438
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N V ++++ MY+KC ++ +A F++ K++ S++WNSI+ A QH Q + LF +M
Sbjct: 439 NDFVASSLIFMYSKCGMIEDARKSFEKTAKDS-SITWNSIMFAYAQHGQGDVALGLFFQM 497
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
++K DHITF + AC+ + +E L + G++ + +D++ + G
Sbjct: 498 RDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGY 557
Query: 452 LGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
L A+ L M +PD + W +L LG + CGD L L + P
Sbjct: 558 LDEAKALIESMPFDPDAMVWKTL-LGACR-ACGDIELAAQVASHLLELEPE--------E 607
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLL 548
C++V I+ N YG + + +C+ L+
Sbjct: 608 HCTYV-----------ILSNMYGHLKRWDEKACMARLM 634
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 174/382 (45%), Gaps = 35/382 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMY--GKCGSLEDARMGFD 94
TY +ISACS + G+ +H ++ + V + N ++ MY S+EDA F
Sbjct: 307 TYTTIISACSHKDN---GKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFH 363
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
M ++ VSW +++ G SQ +A+KL++ M + V + F +++++CS L ++ L
Sbjct: 364 SMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQL 423
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+Q+H +KS S+ ++LI MY+K I DAR F A+ +W S++ A+++
Sbjct: 424 GQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQ 483
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-----ARILFNEID-----SPDL 264
G AL F +M + + F + +ACS+ R L + SP +
Sbjct: 484 HGQGDVALGLFFQM-RDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRM 542
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
+ + +EA +L M PD + +LL AC + QV S+
Sbjct: 543 EHYACAVDLFGRAGYLDEAKALIESM---PFDPDAMVWKTLLGACRACGDIELAAQVASH 599
Query: 325 IIKMGFDSNVPVCNAIL--TMYAKCSVL----CNALLVFKELGKNADSVSW-------NS 371
++++ + + C ++ MY C A L+ + K SW ++
Sbjct: 600 LLELEPEEH---CTYVILSNMYGHLKRWDEKACMARLMRERKVKKVPGWSWIEVKNEVHA 656
Query: 372 IIAACLQHNQAEELFRLFSRML 393
IA H+ EE++++ +++
Sbjct: 657 FIADDRCHSHFEEIYQILEQLM 678
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 126/268 (47%), Gaps = 6/268 (2%)
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV--LCNALLVFKELGKNADSVSWNSI 372
LY H IK+G +++ N IL+ Y +CS L A +F E+ + D+V+WN++
Sbjct: 15 LYNIFITHCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMS-HRDTVTWNTM 73
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
I+ + + L+ M + + PD TF ++ A L++ Q+H I K G
Sbjct: 74 ISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGY 133
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
V+ + L+D+Y KC + A +F + + VSW++LI G+ G D A L
Sbjct: 134 EEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRC 193
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARA 551
M GV + T +LT + + L+ +I+ ++G+ C+ + ++
Sbjct: 194 MEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKII--KHGVQFDNTVCNATITSYSQC 251
Query: 552 GCVHEAEDFINQMACDADIVVWKSLLAS 579
G + +AE + D+V W S+LA+
Sbjct: 252 GSLEDAERVFDGAVGSRDLVTWNSMLAA 279
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 178/586 (30%), Positives = 310/586 (52%), Gaps = 43/586 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
ST+A ++SA ++ + GR+VH + +V + + ++N+Y KCG + DA + FD
Sbjct: 201 STFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDC 260
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
++NVV W AM+ G +N + +AI++++ M + G+ +FT+ S++ AC+ L S CLG
Sbjct: 261 SGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLG 320
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
RQ+ IK+ + L NA + M++KF I DA+ +F+ I KD SW +++ +
Sbjct: 321 RQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHN 380
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA----------------------- 252
+ EA+ H + ++ P+E F +V +ACSN
Sbjct: 381 EEDEEAI-HMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAV 439
Query: 253 -----------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
R + ++D+ + N LIAG+ ++ +EA+ LF ++ L
Sbjct: 440 GSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGL 499
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF-DSNVPVCNAILTMYAKCSVLCNAL 354
P T S+L C G L+ G QVH Y +K GF + + V +++ Y K + +A
Sbjct: 500 KPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDAN 559
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+ E+ + + V W +I++ Q+ + + F RM + + PD +TF ++ AC++M
Sbjct: 560 KLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEM 619
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP-DVVSWSSL 473
+L ++H I K+G + ++D+Y KCG + S+ + F +++ D+ W+S+
Sbjct: 620 TALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSM 679
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
ILG+A+ G DEAL LF +M+ + + VT +GVL AC+H GL+ EG H + M YG
Sbjct: 680 ILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYG 739
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
I+P +H +C +DLL R G + EA++ IN++ D V+W + LA+
Sbjct: 740 IMPRVDHYACFIDLLGRGGHLQEAQEVINELPFRPDGVIWATYLAA 785
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 138/454 (30%), Positives = 232/454 (51%), Gaps = 12/454 (2%)
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
GV P QF + + ACS LG++ G+Q H K GS AL+ MY + R+ DA
Sbjct: 26 GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
R VF GI+ D W SMI+ + + G EA+C F M G+ P+ +V A +
Sbjct: 86 RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGS-SPDRVTCVAVVCALTA 144
Query: 251 F-----ARILFNEIDSP-DLASWNALIAGVASHSN-ANEAMSLFSEMRDRELLPDGLTVH 303
AR L + + +P +WNA+I+G A S +E L+ +MR L P T
Sbjct: 145 LGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFA 204
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
S+L A +G QVH+ ++ G D+NV V ++++ +YAKC + +A+LVF G+
Sbjct: 205 SMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEK 264
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
+ V WN+++ +++ E ++F M ++ D T+ V+GACA + S + Q+
Sbjct: 265 -NVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQV 323
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
C K + +FV N +D++ K G++ A+ LFN + D VSW++L++G
Sbjct: 324 QCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEED 383
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
+EA+ + M GV+P+ V+ V+ ACS++ E G ++ + ++ I S
Sbjct: 384 EEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIH-CLAMKHSICSNHAVGSS 442
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
++D ++ G V + Q+ DA +V +++L
Sbjct: 443 LIDFYSKHGDVESCRKVLAQV--DASSIVPRNVL 474
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 136/513 (26%), Positives = 239/513 (46%), Gaps = 27/513 (5%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP + A +SACS L +L G++ H ++NMY +CG + DAR
Sbjct: 27 VRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDAR 86
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F + + V W +MI+G + + +A+ L+ +M + G P + T +++ A + LG
Sbjct: 87 RVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALG 146
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG---- 206
+ R L + + S +A NA+I+ Y + I VF KD+ WG
Sbjct: 147 RLEDARTL---LHRMPAPSSTVAWNAVISGYAQQSGI--EHEVFG--LYKDMRCWGLWPT 199
Query: 207 -----SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS-----ACSNFARILF 256
SM++A + +E + HG N F+ S+ + C A ++F
Sbjct: 200 RSTFASMLSAAANATAFIEGRQVHAAAVRHG-LDANVFVGSSLINLYAKCGCIGDAILVF 258
Query: 257 NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
+ ++ WNA++ G+ + EA+ +F M+ L D T S+L AC +
Sbjct: 259 DCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHC 318
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
G QV IK D+++ V NA L M++K + +A +F L D+VSWN+++
Sbjct: 319 LGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFN-LITYKDTVSWNALLVGL 377
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
+ + EE + M + PD ++F V+ AC+ + + E Q+HC K + +
Sbjct: 378 THNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNH 437
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
V + L+D Y K G + S RK+ ++ +V + LI G Q DEA+ LF ++
Sbjct: 438 AVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRD 497
Query: 497 GVSPNLVTLVGVLTACSHV--GLVEEGLHLYRI 527
G+ P+ T +L+ C+ + ++ + +H Y +
Sbjct: 498 GLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTL 530
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 180/392 (45%), Gaps = 45/392 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++A +I+ACS++R+ + G+++H + + + + +++ Y K G +E R ++
Sbjct: 404 SFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQV 463
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++V +IAG QN +E++AI L+ Q+L+ G+ P FTF SI+ C+GL S +G+
Sbjct: 464 DASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGK 523
Query: 157 QLHAHVIKSEHGSHLIAQN-ALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSK 214
Q+H + +KS + + +L+ Y K DA + + K++ W ++++ +++
Sbjct: 524 QVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQ 583
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------------- 254
GY ++L F M + + P+E F S+ ACS +
Sbjct: 584 NGYSYQSLLSFWRMRSYDVH-PDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKT 642
Query: 255 --------------------LFNEIDSP-DLASWNALIAGVASHSNANEAMSLFSEMRDR 293
F E+ S D+ WN++I G A + A+EA+ LF +M+D
Sbjct: 643 ATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDS 702
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCN 352
++ D +T +L AC + +G + K+ G V + + + L
Sbjct: 703 QIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQE 762
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
A V EL D V W + +AAC H E
Sbjct: 763 AQEVINELPFRPDGVIWATYLAACRMHKDEER 794
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 183/583 (31%), Positives = 294/583 (50%), Gaps = 42/583 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TYA + ACS L+ G++VH + D+ + + ++++Y KCG + A F M
Sbjct: 231 TYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCM 290
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P++N VSW A++ G +Q + L+ +M S + +FT +++K C+ G++ G+
Sbjct: 291 PKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQ 350
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H+ I+ L+ MY+K DA VF I DV SW ++I + G
Sbjct: 351 IVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKG 410
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE------------------ 258
EA F M H G PN+F S+ SA ++ + + E
Sbjct: 411 QSREAAEVFKRMRHSGVI-PNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVC 469
Query: 259 ----------------------IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+ DL SWNAL++G + + + +F++M
Sbjct: 470 NALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFN 529
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P+ T S+L +C + G QVH+ I+K D N V A++ MYAK L +A +
Sbjct: 530 PNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETI 589
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F L K D +W I+A Q Q E+ + F +M +KP+ T + C+++A+
Sbjct: 590 FNRLIKR-DLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIAT 648
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L+ QLH K G + D+FV + L+D+Y KCG + A +F+ + + D VSW+++I G
Sbjct: 649 LDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICG 708
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y+Q G G +ALK F M G P+ VT +GVL+ACSH+GL+EEG + + YGI P
Sbjct: 709 YSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITP 768
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
T EH +C+VD+L RAG HE E FI +M +++++W+++L +
Sbjct: 769 TIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGA 811
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 171/586 (29%), Positives = 293/586 (50%), Gaps = 48/586 (8%)
Query: 34 RPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
R Y+G++ C+S L G+ +H ++ S PD L N ++N+Y KCGS A F
Sbjct: 127 RLRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVF 186
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
++P+R+VVSWTA+I G + A+ L+ +M + GV +FT+ + +KACS +
Sbjct: 187 GEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLE 246
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
G+Q+HA IK S L +AL+ +Y K ++ A VF + +++ SW +++ F+
Sbjct: 247 FGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFA 306
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------- 254
++G + L F M ++F +V C+N +
Sbjct: 307 QMGDAEKVLNLFCRMT-GSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDE 365
Query: 255 ---------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
+F I+ PD+ SW+A+I + + EA +F MR
Sbjct: 366 FISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHS 425
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
++P+ T+ SL+ A LY G +H+ + K GF+ + VCNA++TMY K + +
Sbjct: 426 GVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDG 485
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
VF E N D +SWN++++ + + R+F++MLA P+ TF ++ +C+
Sbjct: 486 CRVF-EATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSS 544
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
++ +++ Q+H I K L + FV L+D+Y K L A +FN + D+ +W+ +
Sbjct: 545 LSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVI 604
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENE 531
+ GYAQ G G++A+K F +M+ GV PN TL L+ CS + ++ G LH I +
Sbjct: 605 VAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQ 664
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
G + S +VD+ A+ GCV +AE + + D V W +++
Sbjct: 665 SGDMFV---ASALVDMYAKCGCVEDAEVVFDGLV-SRDTVSWNTII 706
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/509 (27%), Positives = 233/509 (45%), Gaps = 50/509 (9%)
Query: 29 TNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
+ I T + ++ C++ +L+ G+ VH + C+ D + +++MY KCG D
Sbjct: 324 SEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGD 383
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A F ++ +VVSW+A+I Q Q +A +++ +M SGV+P QFT S++ A +
Sbjct: 384 ALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATD 443
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
LG + G +HA V K NAL+ MY K + D VF +D+ SW ++
Sbjct: 444 LGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNAL 503
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------- 251
++ F L FN+ML G + PN + F S+ +CS+
Sbjct: 504 LSGFHDNETCDTGLRIFNQMLAEG-FNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNS 562
Query: 252 -----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
A +FN + DL +W ++AG A +A+ F
Sbjct: 563 LDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFI 622
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+M+ + P+ T+ S L C TL G Q+HS IK G ++ V +A++ MYAKC
Sbjct: 623 QMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCG 682
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ +A +VF L + D+VSWN+II QH Q + + F ML PD +TF V+
Sbjct: 683 CVEDAEVVFDGL-VSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVL 741
Query: 409 GACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPD 466
AC+ M +E + ++K G+ + ++DI + G M+ +
Sbjct: 742 SACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSN 801
Query: 467 VVSWSSLI-----LGYAQFGCGDEALKLF 490
V+ W +++ G +FG A+KLF
Sbjct: 802 VLIWETVLGACKMHGNIEFG-ERAAMKLF 829
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 226/483 (46%), Gaps = 50/483 (10%)
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKS--EHGSHLIAQNALIAMYTKFDRILDARNVFSG 196
+ +++ C+ G + G+ +H VIKS SHL N+L+ +Y K A VF
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHL--WNSLVNVYAKCGSANYACKVFGE 188
Query: 197 IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NF 251
I +DV SW ++I F GY A+ F EM G + NEF + + ACS F
Sbjct: 189 IPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGV-EANEFTYATALKACSMCLDLEF 247
Query: 252 ARILFNEI----DSPDL-------------------------------ASWNALIAGVAS 276
+ + E D DL SWNAL+ G A
Sbjct: 248 GKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQ 307
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
+A + ++LF M E+ T+ ++L C L G VHS I++G + + +
Sbjct: 308 MGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFI 367
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
++ MY+KC + +AL VF + ++ D VSW++II Q Q+ E +F RM S
Sbjct: 368 SCCLVDMYSKCGLAGDALKVFVRI-EDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSG 426
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
+ P+ T ++ A + L +H + K G +D V N L+ +Y+K GS+
Sbjct: 427 VIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGC 486
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
++F N D++SW++L+ G+ D L++F +M + G +PN+ T + +L +CS +
Sbjct: 487 RVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLS 546
Query: 517 LVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
V+ G ++ +I++N + + +VD+ A+ + +AE N++ D+ W
Sbjct: 547 DVDLGKQVHAQIVKNS--LDGNDFVGTALVDMYAKNRFLEDAETIFNRLI-KRDLFAWTV 603
Query: 576 LLA 578
++A
Sbjct: 604 IVA 606
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 189/419 (45%), Gaps = 48/419 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T A L+SA + L L G +H + + D + N ++ MY K GS++D F+
Sbjct: 433 TLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEAT 492
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+++SW A+++G N + ++++ QML G P +TF SI+++CS L V LG+
Sbjct: 493 TNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGK 552
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+HA ++K+ + AL+ MY K + DA +F+ + ++D+ +W ++A +++ G
Sbjct: 553 QVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDG 612
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------------------ 252
+A+ F +M G +PNEF S S CS A
Sbjct: 613 QGEKAVKCFIQMQREGV-KPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVA 671
Query: 253 ----------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
++F+ + S D SWN +I G + H +A+ F M D +
Sbjct: 672 SALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTV 731
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALL 355
PD +T +L AC + +G + + + K+ G + ++ + +
Sbjct: 732 PDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVES 791
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAE----ELFRLFSRMLASQIKPDHITFNDVMGA 410
+E+ ++ + W +++ AC H E +LF L +I ++I +++ A
Sbjct: 792 FIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFE--LEPEIDSNYILLSNMFAA 848
>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
Length = 1073
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 183/595 (30%), Positives = 311/595 (52%), Gaps = 45/595 (7%)
Query: 24 FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
+ ++ +T+ ++SAC S +L+ G ++H I + + DV + ++NMY KC
Sbjct: 190 YQMQREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKC 249
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
GSLE AR F++M +RNVVSWTAMI+G Q+ +A+ L+ ++++SG+ P + +F SI+
Sbjct: 250 GSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASIL 309
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
AC+ + G +LHA++ ++ ++ NALI+MY++ + +AR VF + + T
Sbjct: 310 GACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRT 369
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------ 251
+W +MIA + + G EA F M G +QP++F + S+ + C++
Sbjct: 370 TWNAMIAGYGE-GLMEEAFRLFRAMEQKG-FQPDKFTYASLLAICADRADLDRGKELHSQ 427
Query: 252 ----------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEA 283
AR +FN++ ++ SWNA I+ H EA
Sbjct: 428 IASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEA 487
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
F +MR ++ PD +T +LL +C L +G +H I + G SN V NA+++M
Sbjct: 488 FQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISM 547
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
Y +C L +A VF + + D SWN++IAA +QH F LF + + K D T
Sbjct: 548 YGRCGNLADAREVFYRI-RRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYT 606
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
F +V+ A A + L+ +H + K G D+ V+ L+ +Y KCGSL A +F+ ++
Sbjct: 607 FINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQ 666
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
DVV W++++ YA G +ALKLF +M+ GV+P+ T L AC+ + VE G
Sbjct: 667 EKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKK 726
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++ ++ E G+ + ++++ +R GC+ A+ +M DI W +L+A
Sbjct: 727 IHAQLK-EAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKM-LSRDINSWNALIA 779
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/582 (30%), Positives = 303/582 (52%), Gaps = 45/582 (7%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
YA + C +SL G+KVHDH+ ++ +PD+ L N +++MY KCGS+EDA F M
Sbjct: 103 YARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAME 162
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
++VVSW AMI+G + + ++ +A L+ QM + G+ P Q TF SI+ AC ++ G Q
Sbjct: 163 DKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQ 222
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H+ + K+ + S + ALI MY K + AR VF+ + ++V SW +MI+ + + G
Sbjct: 223 IHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGD 282
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------- 251
EAL F +++ G QPN+ F S+ AC+N
Sbjct: 283 SREALALFRKLIRSG-IQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGN 341
Query: 252 --------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
AR +F+ + S + +WNA+IAG EA LF M + P
Sbjct: 342 ALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYG-EGLMEEAFRLFRAMEQKGFQP 400
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D T SLL C R L +G ++HS I G+ +++ V A+++MYAKC A VF
Sbjct: 401 DKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVF 460
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
++ + + +SWN+ I+ C +H+ +E F+ F +M + PDHITF ++ +C L
Sbjct: 461 NQMPER-NVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDL 519
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
E +H I + G+ + V N L+ +Y +CG+L AR++F + D+ SW+++I
Sbjct: 520 ERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAAN 579
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
Q G A LF + RS G + T + VL A +++ ++ G ++ ++E + G
Sbjct: 580 VQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVE-KGGFGKD 638
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++ + ++ G + +AE+ + + + D+V W ++LA+
Sbjct: 639 IRVLTTLIKMYSKCGSLRDAENVFSTVQ-EKDVVCWNAMLAA 679
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 171/588 (29%), Positives = 301/588 (51%), Gaps = 43/588 (7%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+P+ ++A ++ AC++ L G K+H +I + + +V++ N +++MY +CGSL +AR
Sbjct: 298 IQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANAR 357
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD + N +W AMIAG + E +A +L+ M Q G P +FT+ S++ C+
Sbjct: 358 QVFDNLRSLNRTTWNAMIAGYGEGLME-EAFRLFRAMEQKGFQPDKFTYASLLAICADRA 416
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ G++LH+ + + + L ALI+MY K +AR VF+ + ++V SW + I+
Sbjct: 417 DLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFIS 476
Query: 211 AFSKLGYELEALCHFNEM--------------LHHGAYQPNE-----FIFG--------- 242
+ EA F +M L + P + +I G
Sbjct: 477 CCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLS 536
Query: 243 ---------SVFSACSNFA--RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
S++ C N A R +F I DL SWNA+IA H A LF + R
Sbjct: 537 NNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYR 596
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
D T ++L A L G +H + K GF ++ V ++ MY+KC L
Sbjct: 597 SEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLR 656
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A VF + + D V WN+++AA ++ ++ +LF +M + PD T++ + AC
Sbjct: 657 DAENVFSTV-QEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNAC 715
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
A++ ++E ++H + + G+ D V N L+++Y +CG L SA+++F M + D+ SW+
Sbjct: 716 ARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWN 775
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
+LI GY Q G G+ AL+ + M + PN T +L++ + +G E+ ++ E
Sbjct: 776 ALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKKE 835
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + P+ +H + +V L RAG + EAE+FI +++ ++ ++W+SLL +
Sbjct: 836 WNMEPSEQHYAYMVAALGRAGLLKEAEEFIEEISAESAALMWESLLVA 883
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 145/508 (28%), Positives = 258/508 (50%), Gaps = 46/508 (9%)
Query: 113 QNYQENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL 171
++ +E +IK +Q+L + GV + ++ C S+ G+++H H+ ++ +
Sbjct: 76 RDTREGKSIKGAVQLLGKRGVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDI 135
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH 231
N LI+MY+K I DA NVF + KDV SW +MI+ ++ G + EA F +M
Sbjct: 136 YLNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQRE 195
Query: 232 GAYQPNEFIFGSVFSACSN----------------------------------------F 251
G +PN+ F S+ SAC +
Sbjct: 196 G-LKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLEL 254
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR +FNE+ ++ SW A+I+G H ++ EA++LF ++ + P+ ++ S+L AC
Sbjct: 255 ARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTN 314
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
L +G+++H+YI + G + V V NA+++MY++C L NA VF L ++ + +WN+
Sbjct: 315 PNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNL-RSLNRTTWNA 373
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+IA EE FRLF M +PD T+ ++ CA A L+ +LH I TG
Sbjct: 374 MIAG-YGEGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTG 432
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
D+ V L+ +Y KCGS ARK+FN M +V+SW++ I + G EA + F
Sbjct: 433 WQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFK 492
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
+MR V+P+ +T + +L +C+ +E G +++ + N++G++ + ++ + R
Sbjct: 493 QMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKI-NQWGMLSNNHVANALISMYGRC 551
Query: 552 GCVHEAEDFINQMACDADIVVWKSLLAS 579
G + +A + ++ D+ W +++A+
Sbjct: 552 GNLADAREVFYRIR-RRDLGSWNAMIAA 578
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 207/480 (43%), Gaps = 61/480 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N ++S C+ +L EA A+ + + + P T+ L+++C+S L+ GR +H
Sbjct: 472 NAFISCCCRHDLGKEAFQAFKQMRRDD---VNPDHITFITLLNSCTSPEDLERGRYIHGK 528
Query: 61 ILLSKCQPDVVLQNHILN----MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQ 116
I Q ++ NH+ N MYG+CG+L DAR F ++ +R++ SW AMIA Q+
Sbjct: 529 I----NQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGA 584
Query: 117 ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA 176
A L+ + G ++TF ++++A + L + GR +H V K G +
Sbjct: 585 NGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTT 644
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
LI MY+K + DA NVFS + KDV W +M+AA++ +AL F +M G P
Sbjct: 645 LIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGV-NP 703
Query: 237 NEFIFGSVFSACSNF----------------------------------------ARILF 256
+ + + +AC+ A+ +F
Sbjct: 704 DSSTYSTALNACARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVF 763
Query: 257 NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
++ S D+ SWNALIAG + N A+ + M ++P+ T S+L + L
Sbjct: 764 EKMLSRDINSWNALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSILSSYA---QLG 820
Query: 317 QGMQVHSYIIKMGFDSNVPVCNA----ILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
+ Q ++ + + N+ ++ + +L A +E+ + ++ W S+
Sbjct: 821 EEEQAFDFLESIKKEWNMEPSEQHYAYMVAALGRAGLLKEAEEFIEEISAESAALMWESL 880
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
+ AC H E +L ++ + +M A E V+ L + + GL
Sbjct: 881 LVACRIHLNVELAETAVEHLLDAKAQASPAVCEQLMSIYAAAGRWEDVSVLKTTMQEAGL 940
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/585 (29%), Positives = 306/585 (52%), Gaps = 42/585 (7%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P + ++SAC+ + GR VH + + V+ N ++ +Y + GSL A F
Sbjct: 143 PYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFS 202
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+MP + V++ +I+ +Q A++++ +M SG P T S++ AC+ +G +
Sbjct: 203 EMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNK 262
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+QLH++++K+ I + +L+ +Y K I++A +F R +V W M+ A+ +
Sbjct: 263 GKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQ 322
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------- 249
+ ++ F +M+ G +PNEF + + C+
Sbjct: 323 ISDLAKSFDLFCQMVAAGV-RPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMY 381
Query: 250 ---------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+ AR + +++ D+ SW ++IAG H EA+ F +M+
Sbjct: 382 VSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFG 441
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ PD + + S + AC G + QG Q+HS + G+ ++V + NA++ +YA+C A
Sbjct: 442 IWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAF 501
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F+ + ++ D ++WN +++ Q EE +F +M + +K + TF + A A +
Sbjct: 502 SLFEAI-EHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANL 560
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
A ++ Q+H + KTG + V N L+ +Y KCGS+ A+ F M + VSW+++I
Sbjct: 561 ADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTII 620
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
+Q G G EAL LF +M+ G+ PN VT +GVL ACSHVGLVEEGL ++ M +E+GI
Sbjct: 621 TSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGI 680
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P +H +CVVD+L RAG + A F+ +M A+ +VW++LL++
Sbjct: 681 HPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSA 725
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 150/573 (26%), Positives = 274/573 (47%), Gaps = 44/573 (7%)
Query: 47 SLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTA 106
S++ L +H + D + N ++++Y K G ++ AR F+++ R+ VSW A
Sbjct: 54 SVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVA 113
Query: 107 MIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE 166
M++G ++N +A+ LY QM SGV+P + S++ AC+ GR +HA V K
Sbjct: 114 MLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQG 173
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
S + NALIA+Y +F + A VFS + D ++ ++I+ ++ G AL F
Sbjct: 174 SCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFE 233
Query: 227 EMLHHGAYQPNEFIFGSVFSACSNFARI-------------------------------- 254
EM G + P+ S+ +AC++ +
Sbjct: 234 EMRLSG-WTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKC 292
Query: 255 --------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
+F D ++ WN ++ S+ ++ LF +M + P+ T LL
Sbjct: 293 GVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLL 352
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
C + G Q+H IK GF+S++ V ++ MY+K L A + + L + D
Sbjct: 353 RTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVL-EAKDV 411
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
VSW S+IA +QH +E F M I PD+I + ACA + ++ Q+H
Sbjct: 412 VSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSR 471
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
+ +G + DV + N L+++Y +CG A LF +E+ D ++W+ ++ G+AQ G +EA
Sbjct: 472 VYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEA 531
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
L++F +M GV N+ T V ++A +++ +++G ++ + + G E + ++
Sbjct: 532 LEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATV-IKTGCTSETEVANALIS 590
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
L + G + +A+ +M+ + + V W +++ S
Sbjct: 591 LYGKCGSIEDAKMQFFEMS-ERNHVSWNTIITS 622
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 234/497 (47%), Gaps = 62/497 (12%)
Query: 139 FGSIIKACSGLGSV---CLGRQ-------------LHAHVIKSEHGSHLIAQNALIAMYT 182
F + ++ C GLGSV C R+ +HA I G IA N LI +Y
Sbjct: 29 FAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYA 88
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + AR VF ++ +D SW +M++ +++ G EA+ +++M H P ++
Sbjct: 89 KKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQM-HCSGVVPTPYVLS 147
Query: 243 SVFSACS----------------------------------------NFARILFNEIDSP 262
SV SAC+ + A +F+E+
Sbjct: 148 SVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYC 207
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D ++N LI+ A N A+ +F EMR PD +T+ SLL AC L +G Q+H
Sbjct: 208 DRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLH 267
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
SY++K G + + ++L +Y KC V+ AL +FK G + V WN ++ A Q +
Sbjct: 268 SYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKS-GDRTNVVLWNLMLVAYGQISDL 326
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
+ F LF +M+A+ ++P+ T+ ++ C + + Q+H KTG D++V L
Sbjct: 327 AKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVL 386
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y K G L AR++ +E DVVSW+S+I GY Q EAL+ F M+ G+ P+
Sbjct: 387 IDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDN 446
Query: 503 VTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
+ L ++AC+ + + +G ++ R+ + Y + +V+L AR G EA
Sbjct: 447 IGLASAISACAGIKAMRQGQQIHSRVYVSGYS--ADVSIWNALVNLYARCGRSKEAFSLF 504
Query: 562 NQMACDADIVVWKSLLA 578
+ D + W +++
Sbjct: 505 EAIE-HKDKITWNGMVS 520
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 180/394 (45%), Gaps = 44/394 (11%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP+ TY L+ C+ + LG ++H + + + D+ + +++MY K G L+ AR
Sbjct: 341 VRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKAR 400
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ + ++VVSWT+MIAG Q+ +A++ + M G+ P S I AC+G+
Sbjct: 401 RILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIK 460
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G+Q+H+ V S + + + NAL+ +Y + R +A ++F I KD +W M++
Sbjct: 461 AMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVS 520
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------- 251
F++ G EAL F +M G + N F F S SA +N
Sbjct: 521 GFAQSGLYEEALEVFIKMYQAGV-KYNVFTFVSSISASANLADIKQGKQIHATVIKTGCT 579
Query: 252 ---------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
A++ F E+ + SWN +I + H EA+ LF +M
Sbjct: 580 SETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQM 639
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGM-QVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
+ L P+ +T +L AC + +G+ S + G ++ + +
Sbjct: 640 KQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQ 699
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A +E+ +A+++ W ++++AC H E
Sbjct: 700 LDRARKFVEEMPVSANAMVWRTLLSACRVHKNIE 733
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 162/319 (50%), Gaps = 10/319 (3%)
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCA---CIGRLTLYQGMQV 321
AS N + G +H + + +SLF+ + R+ GL CA C G + + + V
Sbjct: 7 ASLNKSLTGFLAHEDPEKLLSLFA-AKVRQC--RGLGSVDFACALRECRGSVKHWPLVPV 63
Query: 322 -HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
H+ I G + N ++ +YAK ++ A VF++L D+VSW ++++ ++
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSAR-DNVSWVAMLSGYARNG 122
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
EE L+ +M S + P + V+ AC K A E +H + K G + V N
Sbjct: 123 LGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGN 182
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+ +Y++ GSL A ++F+ M D V++++LI +AQ G G+ AL++F MR G +P
Sbjct: 183 ALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTP 242
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ VT+ +L AC+ +G + +G L+ + G+ P ++DL + G + EA +
Sbjct: 243 DCVTIASLLAACASIGDLNKGKQLHSYLLKA-GMSPDYIIEGSLLDLYVKCGVIVEALE- 300
Query: 561 INQMACDADIVVWKSLLAS 579
I + ++V+W +L +
Sbjct: 301 IFKSGDRTNVVLWNLMLVA 319
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 94/168 (55%), Gaps = 2/168 (1%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS + LY EAL + ++ T+ ISA ++L ++ G+++H ++
Sbjct: 516 NGMVSGFAQSGLYEEALEVF-IKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVI 574
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ C + + N ++++YGKCGS+EDA+M F +M +RN VSW +I CSQ+ +A+
Sbjct: 575 KTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALD 634
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
L+ QM Q G+ P TF ++ ACS +G V G + + SEHG H
Sbjct: 635 LFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLG-YFKSMSSEHGIH 681
>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 191/589 (32%), Positives = 301/589 (51%), Gaps = 49/589 (8%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKC--QPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+ L+ C R+L LG+ +H H+L VL N + +Y C +E AR FD+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDE 60
Query: 96 MPQR--NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
+P N ++W MI + N A+ LY +ML SGV P ++T+ ++KAC+GL ++
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
G+ +H+HV S+ + + AL+ Y K + A VF + ++D+ +W +MI+ FS
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA-------------------------- 247
+ + F +M PN +F A
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 248 --------------CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM--R 291
C +AR +F+ + +W+A+I G + EA +F +M
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
D + + + +L C L G VH Y +K GF ++ V N I++ YAK LC
Sbjct: 301 DNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLC 360
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A F E+G D +S+NS+I C+ + + EE FRLF M S I+PD T V+ AC
Sbjct: 361 DAFRQFSEIGLK-DVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTAC 419
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ +A+L + H Y G A + + N LMD+Y KCG L A+++F+ M D+VSW+
Sbjct: 420 SHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWN 479
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM-EN 530
+++ G+ G G EAL LF M+ GV+P+ VTL+ +L+ACSH GLV+EG L+ M
Sbjct: 480 TMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRG 539
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++ +IP +H +C+ DLLARAG + EA DF+N+M + DI V +LL++
Sbjct: 540 DFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSA 588
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 149/577 (25%), Positives = 253/577 (43%), Gaps = 61/577 (10%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
N + E + + N+ +R TY ++ AC+ LR++ G+ +H H+ S D+
Sbjct: 80 SNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMY 139
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ-S 130
+ +++ Y KCG LE A FD+MP+R++V+W AMI+G S + D I L++ M +
Sbjct: 140 VCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRID 199
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G+ P T + A G++ G+ +H + + + L+ + ++ +Y K I+ A
Sbjct: 200 GLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYA 259
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML-HHGAYQPNEFIFGSVFSACS 249
R VF +K+ +W +MI + + EA F +ML + G + C+
Sbjct: 260 RRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCA 319
Query: 250 NFARI----------------------------------------LFNEIDSPDLASWNA 269
F + F+EI D+ S+N+
Sbjct: 320 RFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNS 379
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
LI G + E+ LF EMR + PD T+ +L AC L G H Y + G
Sbjct: 380 LITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHG 439
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
+ N +CNA++ MY KC L A VF + K D VSWN+++ H +E LF
Sbjct: 440 YAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKR-DIVSWNTMLFGFGIHGLGKEALSLF 498
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV----MNGLMDI 445
+ M + + PD +T ++ AC+ ++ QL +++ F+V N + D+
Sbjct: 499 NSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGD--FNVIPRIDHYNCMTDL 556
Query: 446 YIKCGSLGSARKLFNFME-NPDVVSWSSLILG---YAQFGCGDEALKLFTRMRSLG-VSP 500
+ G L A N M PD+ +L+ Y G+E K +M+SLG +
Sbjct: 557 LARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSK---KMQSLGETTE 613
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
+LV L +A E R+++ + G++ T
Sbjct: 614 SLVLLSNTYSAAER----WEDAARIRMIQKKRGLLKT 646
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 191/603 (31%), Positives = 308/603 (51%), Gaps = 48/603 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ L + + L+ Y S +T+ T+ L+ AC+SL G H ++
Sbjct: 17 NAIINRLSTAGAFCDVLLTYS-SMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVI 75
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND-AI 121
+ D + ++N Y K G + AR FD M RNVV WT MI GC E+D A
Sbjct: 76 VDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMI-GCYTRAGEHDVAF 134
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+Y M + G+ P T ++ SG+ + + LHA VI+ GS + N+++ +Y
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLL---SGVLELVHLQCLHACVIQYGFGSDVALANSMLNVY 191
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K R+ DA+ +F + +DV SW S+++ +++LG E L M G +P++ F
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDG-IEPDQQTF 250
Query: 242 GSVFSACS----------------------------------------NFARILFNEIDS 261
GS+ SA + N A +F +
Sbjct: 251 GSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMH 310
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
D+ SW A+I+G+ + A+ A+++F M ++P T+ S+L AC + G V
Sbjct: 311 KDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSV 370
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H YI++ ++P N+++TMYAKC L + VF + + D VSWN+I++ Q+
Sbjct: 371 HGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRR-DIVSWNAIVSGHAQNGH 429
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+ LF+ M ++ +PD IT ++ ACA + +L +H ++TK+ L + +
Sbjct: 430 LCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTA 489
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+D+Y KCG LGSA+K F+ M D+VSWSS+I GY G G+ AL++++ G+ PN
Sbjct: 490 LVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPN 549
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
V + +L+ACSH GLV++GL + M ++GI P EH +C+VDLL+RAG V EA F
Sbjct: 550 HVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFY 609
Query: 562 NQM 564
+M
Sbjct: 610 KRM 612
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 248/513 (48%), Gaps = 41/513 (7%)
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
S+ A+I S D + Y ML + P TF S++KAC+ L G H V
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL 222
I + S +LI Y+KF AR VF + ++V W +MI +++ G A
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 223 CHFNEMLHHGAYQPN-------------------------EFIFGS----------VFSA 247
+N M G QP+ ++ FGS V+
Sbjct: 135 SMYNIMRRQG-IQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCK 193
Query: 248 CSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
C A+ LF +D+ D+ SWN+L++G A N E + L M+ + PD T SL
Sbjct: 194 CGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSL 253
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
+ A + L G VH +I++ G + + + +++ MY KC + +A +F+ + + D
Sbjct: 254 VSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGM-MHKD 312
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
+SW ++I+ +Q++ A+ +F RML S++ P T V+ ACA++ S + T +H
Sbjct: 313 VISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHG 372
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
YI + + D+ N L+ +Y KCG L + +F+ M D+VSW++++ G+AQ G +
Sbjct: 373 YILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCK 432
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
AL LF MR P+ +T+V +L AC+ +G + +G ++ + + P + +V
Sbjct: 433 ALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSC-LGPCILIDTALV 491
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
D+ ++ G + A+ ++M D+V W S++A
Sbjct: 492 DMYSKCGDLGSAQKCFDRMP-QQDLVSWSSIIA 523
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 128/253 (50%), Gaps = 4/253 (1%)
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+P S+NA+I +++ + + +S M + PD T SL+ AC G+
Sbjct: 10 NPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLS 69
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
H +I G+ S+ + +++ Y+K +A VF + + + V W ++I +
Sbjct: 70 FHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTM-DDRNVVPWTTMIGCYTRAG 128
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
+ + F +++ M I+P +T ++ ++ L+ LH + + G DV + N
Sbjct: 129 EHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQC---LHACVIQYGFGSDVALAN 185
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
++++Y KCG + A+ LF M+ DV+SW+SL+ GYAQ G E L+L RM++ G+ P
Sbjct: 186 SMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEP 245
Query: 501 NLVTLVGVLTACS 513
+ T +++A +
Sbjct: 246 DQQTFGSLVSAAA 258
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 194/583 (33%), Positives = 289/583 (49%), Gaps = 71/583 (12%)
Query: 34 RP--STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV-LQNHILNMYGKCGSLEDAR 90
RP S YA L+SA + G +H IL + P L NH+L YGK G AR
Sbjct: 3 RPLSSQYAALLSAAARTEPHAAG-ALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARAR 61
Query: 91 MGFDKMP-------------------------------QRNVVSWTAMIAGCSQNYQEND 119
FD P QR+ VS+ A+IAG S
Sbjct: 62 RVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHAR 121
Query: 120 AIKLYIQMLQSG--VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
A++LY +L++G V P + T +++ A S LG LGRQ H +++ G + + L
Sbjct: 122 AVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPL 181
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
+ MY K I DA+ VF + K+V + +MI + C E
Sbjct: 182 VGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLR--------CKMVEE--------- 224
Query: 238 EFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
AR LF + D +W ++ G + ++A++ F MR + +
Sbjct: 225 --------------ARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAI 270
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D T S+L AC L QG Q+H+YII+ +D NV V +A++ MY+KC + A F
Sbjct: 271 DQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAF 330
Query: 358 KELG-KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
+ + KN +SW ++I Q+ +EE R+FS M I PD T V+ +CA +AS
Sbjct: 331 RRMSCKNI--ISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLAS 388
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
LE Q HC +GL + V N L+ +Y KCGS+ A +LF+ M D VSW++L+ G
Sbjct: 389 LEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTG 448
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
YAQFG E + LF +M + V P+ VT +GVL+ACS G VE+G + M+ ++GI+P
Sbjct: 449 YAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVP 508
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H +C++DL +R+G + EAE+FI QM D + W +LL++
Sbjct: 509 IDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSA 551
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 196/421 (46%), Gaps = 81/421 (19%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RPS T + ++ A S+L LGR+ H IL + + + ++ MY K G + DA+
Sbjct: 136 VRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAK 195
Query: 91 MGFDKMPQRNVV-------------------------------SWTAMIAGCSQNYQEND 119
FD+M +NVV +WT M+ G +QN E+
Sbjct: 196 RVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQ 255
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
A+ + +M G+ Q+TFGSI+ AC L ++ G+Q+HA++I++ + ++ +AL+
Sbjct: 256 ALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVD 315
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY+K I A F ++ K++ SW ++I + + G EA+ F+EM G P++F
Sbjct: 316 MYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG-IDPDDF 374
Query: 240 IFGSVFSACSNFARI----------------------------------------LFNEI 259
GSV S+C+N A + LF+E+
Sbjct: 375 TLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM 434
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
D SW AL+ G A A E + LF +M +++ PDG+T +L AC + +G
Sbjct: 435 LFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGC 494
Query: 320 QVHSYIIKMGFDSN-VPVCN---AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
SY M D VP+ + ++ +Y++ L A K++ + D++ W ++++A
Sbjct: 495 ---SYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSA 551
Query: 376 C 376
C
Sbjct: 552 C 552
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 123/220 (55%), Gaps = 1/220 (0%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I I T+ +++AC +L +L+ G+++H +I+ + +V + + +++MY KC S++ A
Sbjct: 268 IAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAE 327
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F +M +N++SWTA+I G QN +A++++ +M + G+ P FT GS+I +C+ L
Sbjct: 328 TAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLA 387
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
S+ G Q H + S ++ NAL+ +Y K I DA +F + D SW +++
Sbjct: 388 SLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVT 447
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
+++ G E + F +ML +P+ F V SACS
Sbjct: 448 GYAQFGRAKETIDLFEKMLAKDV-KPDGVTFIGVLSACSR 486
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 180/552 (32%), Positives = 284/552 (51%), Gaps = 45/552 (8%)
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
P++ N L K G + +AR F+KM R+ +SWT +IAG N+A+ L+ M
Sbjct: 82 PNMPELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNM 141
Query: 128 -LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
+ SG+ QF +KAC+ +V G LH +KS + + +AL+ MY K +
Sbjct: 142 WVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGK 201
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM------------------ 228
+VF + ++V SW ++I G L+ L +F+EM
Sbjct: 202 TEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKA 261
Query: 229 ------LHHG---------------AYQPNEFIFGSVFSAC--SNFARILFNEIDSPDLA 265
LH+G AY N G+++S C ++ LF ++ +PD+
Sbjct: 262 SAESGLLHYGKAIHAQTIKQGFNETAYVVN--TLGTMYSKCRKPDYVMRLFGKMSTPDVV 319
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW LI + A+ F MR ++ P+ T S++ AC G Q+H +
Sbjct: 320 SWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHA 379
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
+++G + V N+I+T+Y+KC +L A LVF + + D +SW++II+ Q + A+E
Sbjct: 380 LRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRK-DIISWSTIISVYCQGSHAKEA 438
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
F S M KP+ V+ C MA LE Q+H Y GL + V + L+ +
Sbjct: 439 FNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISM 498
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y + G+L A K+F+ ++N D+VSW+++I GYA+ G EA+ LF + S+G+ P+ VT
Sbjct: 499 YSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTF 558
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
+G+LTAC+H GLV+ G + Y++M NEY I P++EH C++DLL RAG + EAE + M
Sbjct: 559 IGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMP 618
Query: 566 CDADIVVWKSLL 577
D VVW +LL
Sbjct: 619 FPCDDVVWSTLL 630
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 146/566 (25%), Positives = 250/566 (44%), Gaps = 54/566 (9%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
NEAL+ + ++ ++ + + AC+ ++ G +H + S V + +
Sbjct: 132 NEALILFSNMWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSA 191
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
+++MY K G E F+ M RNVVSWTA+I G D + + +M +S V
Sbjct: 192 LVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYD 251
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
TF +KA + G + G+ +HA IK N L MY+K + +F
Sbjct: 252 SHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFG 311
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---- 251
++ DV SW ++I + ++G E AL F M PNE+ F SV SAC+N
Sbjct: 312 KMSTPDVVSWTNLIMTYVQMGDEERALDAFKRM-RKSDVSPNEYTFASVISACANLAITK 370
Query: 252 ------------------------------------ARILFNEIDSPDLASWNALIAGVA 275
A ++F+ + D+ SW+ +I+
Sbjct: 371 WGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYC 430
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
S+A EA + S M P+ + S+L C L G QVH+Y + +G D
Sbjct: 431 QGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETM 490
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
V +A+++MY++ L A +F + KN D VSW ++I +H ++E LF + +
Sbjct: 491 VHSALISMYSRSGNLQEASKIFDSI-KNNDIVSWTAMINGYAEHGYSQEAISLFENISSV 549
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYIT-KTGLAFDVFVMNGLMDIYIKCGSLGS 454
+ PD++TF ++ AC +++ + +T + +A ++D+ + G L
Sbjct: 550 GLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSE 609
Query: 455 ARKLFNFMENP-DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL----VTLVGVL 509
A + M P D V WS+L+ G D A+ +M L + PN +TL +
Sbjct: 610 AEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQM--LRLHPNSAGAHITLANIY 667
Query: 510 TACSHVGLVEEGLHLYRIMENEYGII 535
+A G EE H+ ++M+++ G+I
Sbjct: 668 SAS---GRREEAAHVRKLMKSK-GVI 689
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 179/583 (30%), Positives = 296/583 (50%), Gaps = 42/583 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +I AC L S+ LGR VHD I + DV + + ++ Y + G + DAR FD+M
Sbjct: 149 TFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRM 208
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P ++ V W M+ G +N ++A ++++M ++ P TF ++ C+ + G
Sbjct: 209 PSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGS 268
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
QLH V+ S N L+AMY K + DAR +F + + D+ +W MI+ + + G
Sbjct: 269 QLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNG 328
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGS--------------------------------- 243
+ EA C F+EM+ +P+ F S
Sbjct: 329 FMDEASCLFHEMIS-ARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLK 387
Query: 244 -----VFSACSN--FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
++ C + AR +F++ D+ A+I+G + N A+ +F + +
Sbjct: 388 SALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMR 447
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
+ +T+ S+L AC G L G ++H +I+K G + V +AI+ MYAKC L A
Sbjct: 448 ANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQT 507
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + + D+V WNS+I +C Q+ + EE LF +M + K D ++ + + ACA + +
Sbjct: 508 FIGI-SDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPA 566
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L ++H ++ + D+F + L+D+Y KCG+L A ++F+ ME + VSW+S+I
Sbjct: 567 LHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAA 626
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y G ++L LF M G+ P+ VT + +++AC H G V+EG+H +R M E GI+
Sbjct: 627 YGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMA 686
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH +C+VDL RAG ++EA IN M D VW +LL +
Sbjct: 687 RMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGA 729
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 159/580 (27%), Positives = 268/580 (46%), Gaps = 46/580 (7%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++ C+ L GR+ H +L++ + +L +L MY CG+ DA+ F ++
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
W MI G + Q + A+ Y +ML G +P ++TF +IKAC GL SV LGR +H
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+ + ++LI Y++ I DAR +F + KD W M+ + K G
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDN 231
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NF------------------------ 251
A F EM PN F V S C+ NF
Sbjct: 232 ATGVFMEM-RRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLL 290
Query: 252 -----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
AR LF+ + DL +WN +I+G + +EA LF EM + PD +
Sbjct: 291 AMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSI 350
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
T S L TL QG ++H YII+ G +V + +A++ +Y KC + A +F +
Sbjct: 351 TFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQR 410
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
D V ++I+ + + +F +L +++ + +T V+ ACA +A+L +
Sbjct: 411 -TPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLG 469
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
+LH +I K G +V + +MD+Y KCG L A + F + + D V W+S+I +Q
Sbjct: 470 KELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQN 529
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
G +EA+ LF +M G + V++ L+AC+++ + G ++ M G +
Sbjct: 530 GKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMR--GAFRSDLF 587
Query: 541 C-SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
S ++D+ ++ G + A + M + + V W S++A+
Sbjct: 588 AESALIDMYSKCGNLDLACRVFDTME-EKNEVSWNSIIAA 626
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/484 (29%), Positives = 233/484 (48%), Gaps = 54/484 (11%)
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
SI++ C+ + GRQ HA ++ + G + I L+ MY LDA+N+F +
Sbjct: 51 SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------- 251
W MI F+ +G AL + +ML G P+++ F V AC
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTL-PDKYTFPYVIKACGGLNSVALGRVV 169
Query: 252 -------------------------------ARILFNEIDSPDLASWNALIAGVASHSNA 280
AR LF+ + S D WN ++ G + +
Sbjct: 170 HDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDW 229
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
+ A +F EMR E P+ +T +L C + + G Q+H ++ G + + PV N +
Sbjct: 230 DNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTL 289
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
L MYAKC L +A +F + K D V+WN +I+ +Q+ +E LF M+++++KPD
Sbjct: 290 LAMYAKCGHLFDARRLFDMMPK-TDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPD 348
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
ITF+ + ++ A+L ++HCYI + G++ DVF+ + L+DIY KC + ARK+F+
Sbjct: 349 SITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFD 408
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
D+V +++I GY G + AL++F + + N VTL VL AC+ + +
Sbjct: 409 QRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTL 468
Query: 521 GLHLY-RIMENEYGIIPTREHC---SCVVDLLARAGCVHEA-EDFINQMACDADIVVWKS 575
G L+ I++N +G C S ++D+ A+ G + A + FI D D V W S
Sbjct: 469 GKELHGHILKNGHG-----GSCYVGSAIMDMYAKCGRLDLAHQTFIG--ISDKDAVCWNS 521
Query: 576 LLAS 579
++ S
Sbjct: 522 MITS 525
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 193/394 (48%), Gaps = 42/394 (10%)
Query: 32 RIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
R++P T++ + S +L+ G+++H +I+ + DV L++ ++++Y KC +E A
Sbjct: 344 RMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMA 403
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD+ ++V TAMI+G N N+A++++ +LQ + T S++ AC+GL
Sbjct: 404 RKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGL 463
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
++ LG++LH H++K+ HG +A++ MY K R+ A F GI+ KD W SMI
Sbjct: 464 AALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMI 523
Query: 210 AAFSKLGYELEALCHFNEM------------------------LHH----------GAYQ 235
+ S+ G EA+ F +M LH+ GA++
Sbjct: 524 TSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFR 583
Query: 236 PNEFIFGSV---FSACSN--FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ F ++ +S C N A +F+ ++ + SWN++IA +H ++++LF M
Sbjct: 584 SDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGM 643
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAILTMYAKCSV 349
+ PD +T +++ AC + +G+ + ++G + + ++ ++ +
Sbjct: 644 LGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGR 703
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A + + + D+ W +++ AC H E
Sbjct: 704 LNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVE 737
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 136/295 (46%), Gaps = 43/295 (14%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+R T A ++ AC+ L +L LG+++H HIL + + + I++MY KCG L+ A
Sbjct: 446 MRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAH 505
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F + ++ V W +MI CSQN + +AI L+ QM +G + + + AC+ L
Sbjct: 506 QTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLP 565
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G+++HA +++ S L A++ALI MY+K + A VF + K+ SW S+IA
Sbjct: 566 ALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIA 625
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNEID- 260
A+ G ++L F+ ML G QP+ F ++ SAC + + R + E+
Sbjct: 626 AYGNHGRLKDSLNLFHGMLGDGI-QPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGI 684
Query: 261 --------------------------------SPDLASWNALIAGVASHSNANEA 283
SPD W L+ H N A
Sbjct: 685 MARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELA 739
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 133/292 (45%), Gaps = 6/292 (2%)
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
FS D L P + S+L C L QG Q H+ ++ G N + +L MY
Sbjct: 37 FSIHNDDSLAPQ---LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVL 93
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
C +A +F +L + S WN +I Q + + +ML PD TF
Sbjct: 94 CGAFLDAKNIFYQL-RLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPY 152
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
V+ AC + S+ + +H I G DVFV + L+ Y + G + AR LF+ M + D
Sbjct: 153 VIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKD 212
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
V W+ ++ GY + G D A +F MR +PN VT VL+ C+ ++ G L+
Sbjct: 213 GVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHG 272
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++ + G+ + ++ + A+ G + +A + M D+V W +++
Sbjct: 273 LVVSS-GLEMDSPVANTLLAMYAKCGHLFDARRLFDMMP-KTDLVTWNGMIS 322
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 191/603 (31%), Positives = 308/603 (51%), Gaps = 48/603 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ L + + L+ Y S +T+ T+ L+ AC+SL G H ++
Sbjct: 17 NAIINRLSTAGAFCDVLLTYS-SMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVI 75
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND-AI 121
+ D + ++N Y K G + AR FD M RNVV WT MI GC E+D A
Sbjct: 76 VDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMI-GCYTRAGEHDVAF 134
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+Y M + G+ P T ++ SG+ + + LHA VI+ GS + N+++ +Y
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLL---SGVLELVHLQCLHACVIQYGFGSDVALANSMLNVY 191
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K R+ DA+ +F + +DV SW S+++ +++LG E L M G +P++ F
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDG-IEPDQQTF 250
Query: 242 GSVFSACS----------------------------------------NFARILFNEIDS 261
GS+ SA + N A +F +
Sbjct: 251 GSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMH 310
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
D+ SW A+I+G+ + A+ A+++F M ++P T+ S+L AC + G V
Sbjct: 311 KDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSV 370
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H YI++ ++P N+++TMYAKC L + VF + + D VSWN+I++ Q+
Sbjct: 371 HGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRR-DIVSWNAIVSGHAQNGH 429
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+ LF+ M ++ +PD IT ++ ACA + +L +H ++TK+ L + +
Sbjct: 430 LCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTA 489
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+D+Y KCG LGSA+K F+ M D+VSWSS+I GY G G+ AL++++ G+ PN
Sbjct: 490 LVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPN 549
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
V + +L+ACSH GLV++GL + M ++GI P EH +C+VDLL+RAG V EA F
Sbjct: 550 HVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFY 609
Query: 562 NQM 564
+M
Sbjct: 610 KRM 612
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 243/497 (48%), Gaps = 41/497 (8%)
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
D + Y ML + P TF S++KAC+ L G H VI + S +LI
Sbjct: 31 DVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLI 90
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN- 237
Y+KF AR VF + ++V W +MI +++ G A +N M G QP+
Sbjct: 91 NFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQG-IQPSS 149
Query: 238 ------------------------EFIFGS----------VFSACSNF--ARILFNEIDS 261
++ FGS V+ C A+ LF +D+
Sbjct: 150 VTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDA 209
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
D+ SWN+L++G A N E + L M+ + PD T SL+ A + L G V
Sbjct: 210 RDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMV 269
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H +I++ G + + + +++ MY KC + +A +F+ + + D +SW ++I+ +Q++
Sbjct: 270 HGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGM-MHKDVISWTAMISGLVQNDC 328
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
A+ +F RML S++ P T V+ ACA++ S + T +H YI + + D+ N
Sbjct: 329 ADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNS 388
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+ +Y KCG L + +F+ M D+VSW++++ G+AQ G +AL LF MR P+
Sbjct: 389 LVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPD 448
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
+T+V +L AC+ +G + +G ++ + + + P + +VD+ ++ G + A+
Sbjct: 449 SITVVSLLQACASIGALHQGKWIHNFV-TKSCLGPCILIDTALVDMYSKCGDLGSAQKCF 507
Query: 562 NQMACDADIVVWKSLLA 578
++M D+V W S++A
Sbjct: 508 DRMP-QQDLVSWSSIIA 523
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 128/253 (50%), Gaps = 4/253 (1%)
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+P S+NA+I +++ + + +S M + PD T SL+ AC G+
Sbjct: 10 NPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLS 69
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
H +I G+ S+ + +++ Y+K +A VF + + + V W ++I +
Sbjct: 70 FHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTM-DDRNVVPWTTMIGCYTRAG 128
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
+ + F +++ M I+P +T ++ ++ L+ LH + + G DV + N
Sbjct: 129 EHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQC---LHACVIQYGFGSDVALAN 185
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
++++Y KCG + A+ LF M+ DV+SW+SL+ GYAQ G E L+L RM++ G+ P
Sbjct: 186 SMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEP 245
Query: 501 NLVTLVGVLTACS 513
+ T +++A +
Sbjct: 246 DQQTFGSLVSAAA 258
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 194/620 (31%), Positives = 324/620 (52%), Gaps = 45/620 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + +L+ +A+ + + T T +I AC + ++LG VH L
Sbjct: 164 NALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFAL 223
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+K DV + N ++ MYGK G +E A FDKMPQRN+VSW +++ C +N ++
Sbjct: 224 KTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYG 283
Query: 123 LYIQMLQ--SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
L+ +L G+MP T ++I C+ G V LG H +K L ++L+ M
Sbjct: 284 LFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDM 343
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK-----------LGYELEALCHFNEM- 228
Y+K + +AR +F K+V SW SMI +SK ++E NE+
Sbjct: 344 YSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVT 402
Query: 229 ------------------------LHHGAYQPNEFI---FGSVFSACS--NFARILFNEI 259
L HG Q +E + F + ++ C ++A +F +
Sbjct: 403 LLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGM 462
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
+S ++SWNALI G + +A+ L+ MR L PD T+ SLL AC +L G
Sbjct: 463 ESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGK 522
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
++H +++ GF+ + +C +++++Y +C + A L F + + + V WN++I Q+
Sbjct: 523 EIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNM-EEKNLVCWNTMINGFSQN 581
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+ +F +ML+S+I PD I+ +GAC+++++L + +LHC+ K+ L FV
Sbjct: 582 EFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVT 641
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
L+D+Y KCG + ++ +F+ + V+W+ LI GY G G +A++LF M++ G
Sbjct: 642 CSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFR 701
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
P+ VT + +LTAC+H GLV EGL M++ +GI P EH +CVVD+L RAG ++EA +
Sbjct: 702 PDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALE 761
Query: 560 FINQMACDADIVVWKSLLAS 579
+N++ D +W SLL+S
Sbjct: 762 LVNELPDKPDSRIWSSLLSS 781
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 166/628 (26%), Positives = 310/628 (49%), Gaps = 58/628 (9%)
Query: 2 SNDYVSSLCKQNLYNEALVAYDFSQNNTNIRI-----RPSTYAGLI-SACSSLRSLQLGR 55
++ + +LC N+A ++F Q+N N + +P GL+ C +++++GR
Sbjct: 57 ASKHFHNLCNTGNLNQA---FNFLQSNLNDVVSSSNSKPKQLIGLLLQLCGEYKNIEIGR 113
Query: 56 KVHDHILLSK-CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
K+H+ I S Q DVVL ++ MY C S D+ + F+ ++N+ W A+++G +N
Sbjct: 114 KIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRN 173
Query: 115 YQENDAIKLYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA 173
DA+ ++++M+ + +P FT +IKAC G+ V LG +H +K++ S +
Sbjct: 174 SLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFV 233
Query: 174 QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH-HG 232
NALIAMY KF + A VF + ++++ SW S++ A + G E+ F +L+
Sbjct: 234 GNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDE 293
Query: 233 AYQPN---------------EFIFGSVF-----------------------SACSNF--A 252
P+ E G VF S C A
Sbjct: 294 GLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEA 353
Query: 253 RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR-DRELLPDGLTVHSLLCACIG 311
R+LF + + ++ SWN++I G + + A L +M+ + ++ + +T+ ++L C
Sbjct: 354 RVLF-DTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEE 412
Query: 312 RLTLYQGMQVHSYIIKMGF-DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
+ + ++H Y ++ GF S+ V NA + YAKC L A VF + S SWN
Sbjct: 413 EIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVS-SWN 471
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
++I +Q+ + L+ M S ++PD T ++ ACA++ SL ++H + +
Sbjct: 472 ALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRN 531
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
G D F+ L+ +Y++CG + A+ F+ ME ++V W+++I G++Q +AL +F
Sbjct: 532 GFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMF 591
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
+M S + P+ ++++G L ACS V + G L+ + + CS ++D+ A+
Sbjct: 592 HQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCS-LIDMYAK 650
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLA 578
GC+ ++++ +++ + V W L+
Sbjct: 651 CGCMEQSQNIFDRVHLKGE-VTWNVLIT 677
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 158/307 (51%), Gaps = 16/307 (5%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T A L+SAC+ L+SL G+++H +L + + D + ++++Y +CG + A++ FD M
Sbjct: 504 TIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNM 563
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++N+V W MI G SQN DA+ ++ QML S + P + + + ACS + ++ LG+
Sbjct: 564 EEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGK 623
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+LH +KS H +LI MY K + ++N+F + K +W +I + G
Sbjct: 624 ELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHG 683
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEID-----------SPDLA 265
+ +A+ F M + G ++P+ F ++ +AC N A ++ ++ P L
Sbjct: 684 HGRKAIELFKSMQNAG-FRPDSVTFIALLTAC-NHAGLVAEGLEYLGQMQSLFGIKPKLE 741
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
+ ++ + NEA+ L +E+ D+ PD SLL +C L G +V + +
Sbjct: 742 HYACVVDMLGRAGRLNEALELVNELPDK---PDSRIWSSLLSSCRNYRDLDIGEKVANKL 798
Query: 326 IKMGFDS 332
+++G D
Sbjct: 799 LELGPDK 805
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 197/456 (43%), Gaps = 52/456 (11%)
Query: 26 QNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK-CQPDVVLQNHILNMYGKCG 84
Q +++ T ++ C +++H + L Q D ++ N + Y KCG
Sbjct: 391 QMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCG 450
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
SL A F M + V SW A+I G QN A+ LY+ M SG+ P FT S++
Sbjct: 451 SLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLS 510
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
AC+ L S+ G+++H ++++ +L+++Y + +IL A+ F + K++
Sbjct: 511 ACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVC 570
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------- 254
W +MI FS+ + +AL F++ML + P+E ACS + +
Sbjct: 571 WNTMINGFSQNEFPFDALDMFHQMLSSKIW-PDEISIIGALGACSQVSALRLGKELHCFA 629
Query: 255 ------------------------------LFNEIDSPDLASWNALIAGVASHSNANEAM 284
+F+ + +WN LI G H + +A+
Sbjct: 630 VKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAI 689
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM----GFDSNVPVCNAI 340
LF M++ PD +T +LL AC + +G++ Y+ +M G + +
Sbjct: 690 ELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLE---YLGQMQSLFGIKPKLEHYACV 746
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+ M + L AL + EL DS W+S++++C + + ++ +++L ++ PD
Sbjct: 747 VDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLL--ELGPD 804
Query: 401 HI-TFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
+ + A++ + V ++ + + GL D
Sbjct: 805 KAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKD 840
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 188/597 (31%), Positives = 300/597 (50%), Gaps = 47/597 (7%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKC--QPDVVLQNHILNMYGKCG 84
N+ N ++ LI + R L+ + +H ++ + + V+ N ++ Y KC
Sbjct: 53 NDGNCCYSETSLIELIRESADERCLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCS 112
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
AR FD++PQ++V SWT ++ G ++N D I ++++L ++P ++ + I+
Sbjct: 113 DFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQ 172
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
AC G+ S+ +G +HA VI S +L+ MY K RI D+ VF+ + ++ S
Sbjct: 173 ACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVS 232
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA---------RIL 255
W +MI+ F G EA F ML +PN F SV A RI
Sbjct: 233 WNAMISGFVSNGLYAEAYNSFLRMLGE-EIRPNVACFISVSKAIGQLGDVEKGRYINRIA 291
Query: 256 FNEIDSPDL---------------------------------ASWNALIAGVASHSNANE 282
F ++ WNA+I+G + E
Sbjct: 292 FEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEE 351
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
AM LF M + D T S L + +L Q+H I K G V +CNA++
Sbjct: 352 AMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSG-SIGVSLCNALMD 410
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
YAKC L +A+ + + ++ +SW +++ A Q ++ E+ +FS+M +P+ +
Sbjct: 411 AYAKCGEL-DAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQV 469
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
TF+ V+ +CA + SLE Q+H KTG A D V + L+D+Y KCGS+ A K+F +
Sbjct: 470 TFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESL 529
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
++PDV+SW+++I GYAQ G +AL+LF +M + +PN T + +L ACSH GLV+EGL
Sbjct: 530 KDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGL 589
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ +ME YG++P EH +CVVD+L R G + EA FI +M + D VW +LL +
Sbjct: 590 RYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDEKVWSTLLGA 646
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 180/608 (29%), Positives = 311/608 (51%), Gaps = 42/608 (6%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN E V + + + P + ++SAC+ QLGR +H + +
Sbjct: 120 QNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETF 179
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ N ++++Y +C S A F M + V++ +I+G +Q + A+ ++ +M SG
Sbjct: 180 VGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSG 239
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
+ P T S++ ACS +G + G+QLH++++K+ I + +L+ +Y K I +A
Sbjct: 240 LSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEAL 299
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF 251
+F R +V W M+ A+ ++ ++ F ML G +PN+F + + C++
Sbjct: 300 QIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGV-RPNKFTYPCMLRTCTHT 358
Query: 252 ARILFNE----------------------------------------IDSPDLASWNALI 271
I E I+ D+ SW ++I
Sbjct: 359 GEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMI 418
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
AG H EA+ F EM+ + PD + + S + AC G ++QG Q+H+ + G+
Sbjct: 419 AGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYS 478
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
++V + N ++ +YA+C + A F+ + ++ + ++WN +I+ Q EE ++F +
Sbjct: 479 ADVSIWNGLVYLYARCGISKEAFSSFEAI-EHKEGITWNGLISGFAQSGLYEEALKVFMK 537
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M + K + TF + A A +A ++ Q+H + KTG + + N L+ +Y KCGS
Sbjct: 538 MDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGS 597
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+ A+ F M + VSW+++I +Q G G EAL LF +M+ G+ P+ VT VGVLTA
Sbjct: 598 IEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTA 657
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
CSHVGLVEEGL ++ M NE+GI P +H +CVVD+L RAG + A+ F+ +M AD +
Sbjct: 658 CSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSM 717
Query: 572 VWKSLLAS 579
VW++LL++
Sbjct: 718 VWRTLLSA 725
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 151/584 (25%), Positives = 275/584 (47%), Gaps = 49/584 (8%)
Query: 38 YAGLISAC-SSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+A + AC S R L ++H ++ ++ N ++++Y K G + AR F+++
Sbjct: 44 FACALRACRGSGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEEL 103
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+ VSW A+++G +QN +A++LY +M +SGV+P + SI+ AC+ LGR
Sbjct: 104 SVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGR 163
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H V K S NALI++Y + A VF + D ++ ++I+ ++ G
Sbjct: 164 LIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCG 223
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
+ AL F+EM G P+ S+ +ACS +
Sbjct: 224 HGDRALGIFDEMQLSG-LSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIME 282
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+F+ D ++ WN ++ + ++ +F M +
Sbjct: 283 GSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVR 342
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P+ T +L C + G Q+HS IK GF S++ V ++ MY+K L A +
Sbjct: 343 PNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRI 402
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
++ + D VSW S+IA +QH +E F M A I PD+I + ACA + +
Sbjct: 403 L-DMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKA 461
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
+ +Q+H + +G + DV + NGL+ +Y +CG A F +E+ + ++W+ LI G
Sbjct: 462 VHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISG 521
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGII 535
+AQ G +EALK+F +M G N+ T V ++A +++ +++G ++ R+++ G
Sbjct: 522 FAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKT--GYT 579
Query: 536 PTREHCSCVVDLLARAGCVHEAE-DFINQMACDADIVVWKSLLA 578
E + ++ L + G + +A+ DF + V W +++
Sbjct: 580 SETEISNALISLYGKCGSIEDAKMDFFEMTKRNE--VSWNTIIT 621
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/471 (26%), Positives = 221/471 (46%), Gaps = 43/471 (9%)
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC-L 154
M R S+ +AG + L+ + ++ G F ++AC G G L
Sbjct: 1 MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPL 60
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
++HA I + I N LI +Y K + AR VF ++ +D SW ++++ +++
Sbjct: 61 VPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQ 120
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------------ 250
G EA+ + EM H P ++ S+ SAC+
Sbjct: 121 NGLGEEAVRLYREM-HRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETF 179
Query: 251 ----------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
A +F ++ D ++N LI+G A + + A+ +F EM+
Sbjct: 180 VGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSG 239
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
L PD +T+ SLL AC L +G Q+HSY++K G + + ++L +Y K + AL
Sbjct: 240 LSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEAL 299
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F + G + V WN ++ A Q + + F +F RMLA+ ++P+ T+ ++ C
Sbjct: 300 QIF-DSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHT 358
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+ + Q+H K G D++V L+D+Y K G L A+++ + +E DVVSW+S+I
Sbjct: 359 GEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMI 418
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
GY Q EAL+ F M++ G+ P+ + L ++AC+ + V +G ++
Sbjct: 419 AGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIH 469
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 177/394 (44%), Gaps = 44/394 (11%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP+ TY ++ C+ + LG ++H + + Q D+ + +++MY K G L+ A+
Sbjct: 341 VRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQ 400
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
D + +++VVSWT+MIAG Q+ +A++ + +M G+ P S I AC+G+
Sbjct: 401 RILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIK 460
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+V G Q+HA V S + + + N L+ +Y + +A + F I K+ +W +I+
Sbjct: 461 AVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLIS 520
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL--------------- 255
F++ G EAL F +M GA + N F F S SA +N A I
Sbjct: 521 GFAQSGLYEEALKVFMKMDQAGA-KYNVFTFVSSISASANLADIKQGKQIHARVIKTGYT 579
Query: 256 -------------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
F E+ + SWN +I + H EA+ LF +M
Sbjct: 580 SETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQM 639
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGM-QVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
+ + L P +T +L AC + +G+ S + G ++ + +
Sbjct: 640 KQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQ 699
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A +E+ ADS+ W ++++AC H E
Sbjct: 700 LDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLE 733
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 158/318 (49%), Gaps = 8/318 (2%)
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG---RLTLYQGMQV 321
AS+N +AG + + + + LF+ + ++ + L AC G R L ++
Sbjct: 7 ASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVP--EI 64
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H+ I G + N ++ +YAK + A VF+EL D+VSW ++++ Q+
Sbjct: 65 HAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVR-DNVSWVAVLSGYAQNGL 123
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
EE RL+ M S + P + ++ AC K ++ +H + K G + FV N
Sbjct: 124 GEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNA 183
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+ +Y++C S A ++F M D V++++LI G+AQ G GD AL +F M+ G+SP+
Sbjct: 184 LISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPD 243
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
VT+ +L ACS VG + +G L+ + G+ ++DL ++G + EA
Sbjct: 244 SVTIASLLAACSAVGDLRKGKQLHSYLLKA-GMSLDYIMEGSLLDLYVKSGDIEEALQIF 302
Query: 562 NQMACDADIVVWKSLLAS 579
+ ++V+W +L +
Sbjct: 303 DS-GDRTNVVLWNLMLVA 319
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 179/540 (33%), Positives = 297/540 (55%), Gaps = 36/540 (6%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR- 99
L+ SS++S +++H IL + P L + IL++Y L D+ + F+ +P
Sbjct: 11 LLQNPSSVKSKSQAKQLHAQILRTSL-PSPSLLSTILSIYSNLNLLHDSLLIFNSLPSPP 69
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
++W ++I + + ++ +IQML SG P F S++K+C+ + + G +H
Sbjct: 70 TTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVH 129
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
+I+ G L NAL+ MY+KF L+ N + K V G +SK
Sbjct: 130 GCIIRLGMGFDLYTCNALMNMYSKF-WSLEEVNTY-----KKVFDEGKTSDVYSK----- 178
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSN 279
+ + GS+ R +F + D+ SWN +I+G A +
Sbjct: 179 --------------KEKESYYLGSL--------RKVFEMMPKRDIVSWNTVISGNAQNGM 216
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
+A+ + EM + +L PD T+ S+L + L +G ++H Y I+ G+D++V + ++
Sbjct: 217 HEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSS 276
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
++ MYAKC+ + ++ VF L ++ D +SWNSIIA C+Q+ +E + F +ML ++IKP
Sbjct: 277 LIDMYAKCTRVDDSCRVFYMLPQH-DGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKP 335
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
+H++F+ +M ACA + +L + QLH YI ++ +VF+ + L+D+Y KCG++ +AR +F
Sbjct: 336 NHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIF 395
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ ME D+VSW+++I+GYA G +A+ LF RM GV PN V + VLTACSH GLV+
Sbjct: 396 DKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVD 455
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
E + M +Y IIP EH + V DLL R G + EA +FI+ M + VW +LLA+
Sbjct: 456 EAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAA 515
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 159/317 (50%), Gaps = 15/317 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + ++ +AL+ N ++R T + ++ + +L G+++H + +
Sbjct: 205 NTVISGNAQNGMHEDALMMVR-EMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAI 263
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ DV + + +++MY KC ++D+ F +PQ + +SW ++IAGC QN ++ +K
Sbjct: 264 RNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLK 323
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ QML + + P +F SI+ AC+ L ++ LG+QLH ++I+S ++ +AL+ MY
Sbjct: 324 FFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYA 383
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I AR +F + D+ SW +MI ++ G+ +A+ F M G +PN F
Sbjct: 384 KCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGV-KPNYVAFM 442
Query: 243 SVFSACSNFARI-----LFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEMRD 292
+V +ACS+ + FN + P L + A+ + EA S+M
Sbjct: 443 AVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDM-- 500
Query: 293 RELLPDGLTVHSLLCAC 309
+ P G +LL AC
Sbjct: 501 -HIEPTGSVWSTLLAAC 516
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 177/422 (41%), Gaps = 79/422 (18%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA------ 89
+ + ++ +C+ ++ L+ G VH I+ D+ N ++NMY K SLE+
Sbjct: 107 NVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKV 166
Query: 90 -----------------------RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
R F+ MP+R++VSW +I+G +QN DA+ + +
Sbjct: 167 FDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVRE 226
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M + + P FT S++ + ++ G+++H + I++ + + + ++LI MY K R
Sbjct: 227 MGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTR 286
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+ D+ VF + + D SW S+IA + G E L F +ML +PN F S+
Sbjct: 287 VDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQML-IAKIKPNHVSFSSIMP 345
Query: 247 ACSNF----------------------------------------ARILFNEIDSPDLAS 266
AC++ AR +F++++ D+ S
Sbjct: 346 ACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVS 405
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC-----IGRLTLYQGMQV 321
W A+I G A H +A +A+SLF M + P+ + ++L AC + Y
Sbjct: 406 WTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMT 465
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
Y I G + V + + + L A ++ W++++AAC H
Sbjct: 466 QDYRIIPGLEHYAAVAD----LLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKN 521
Query: 382 AE 383
E
Sbjct: 522 IE 523
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 187/591 (31%), Positives = 318/591 (53%), Gaps = 49/591 (8%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+TY+ L+ +C R+ QLG+ VH ++ S + D V+ N ++++Y KCG E AR+ F+
Sbjct: 27 TTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEG 86
Query: 96 MP-QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
M +R++VSW+AM++ + N E AI ++ ML+ G P ++ F ++I+ACS +
Sbjct: 87 MGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWV 146
Query: 155 GRQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRIL-DARNVFSGIARKDVTSWGSMIAAF 212
G ++ V+K+ + + + LI M+ K L A VF + +++ +W MI F
Sbjct: 147 GEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRF 206
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------- 251
++LG +A+ F +M G Y P+ F + SV SAC+
Sbjct: 207 AQLGCARDAIDLFLDMELSG-YVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALD 265
Query: 252 ----------------------ARILFNEIDSPDLASWNALI-AGVASHSNANEAMSLFS 288
+R +F ++ ++ SW A+I A V S EA+ LF
Sbjct: 266 VCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFC 325
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+M + P+ + S+L AC Y G QV+SY +K+G S V N++++MYA+
Sbjct: 326 KMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSG 385
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ +A F L + + VS+N+I+ ++ ++EE F LF+ + + I TF ++
Sbjct: 386 RMEDARKAFDILFEK-NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLL 444
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
A + ++ Q+H + K G + + N L+ +Y +CG++ +A ++FN ME+ +V+
Sbjct: 445 SGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVI 504
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
SW+S+I G+A+ G AL++F +M G PN +T V VL+ACSHVG++ EG + M
Sbjct: 505 SWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSM 564
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
E+GI+P EH +C+VDLL R+G + EA +FIN M AD +VW++LL +
Sbjct: 565 YKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 615
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 248/500 (49%), Gaps = 53/500 (10%)
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M Q P T+ ++K+C + LG+ +H +++S + N LI++Y+K
Sbjct: 17 MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 76
Query: 187 ILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
AR +F G+ ++D+ SW +M++ F+ E +A+ F +ML G Y PNE+ F +V
Sbjct: 77 TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFY-PNEYCFAAVI 135
Query: 246 SACSNF------------------------------------------ARILFNEIDSPD 263
ACSN A +F+++ +
Sbjct: 136 RACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERN 195
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
L +W +I A A +A+ LF +M +PD T S+L AC L G Q+HS
Sbjct: 196 LVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHS 255
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSV---LCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+I++G +V V +++ MYAKC+ + ++ VF+++ ++ + +SW +II A +Q
Sbjct: 256 RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH-NVMSWTAIITAYVQSG 314
Query: 381 QAE-ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+ + E LF +M++ I+P+H +F+ V+ AC ++ Q++ Y K G+A V
Sbjct: 315 ECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVG 374
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
N L+ +Y + G + ARK F+ + ++VS+++++ GYA+ +EA LF + G+
Sbjct: 375 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 434
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAE 558
+ T +L+ + +G + +G ++ R+++ Y + C+ ++ + +R G + A
Sbjct: 435 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK--SNQCICNALISMYSRCGNIEAAF 492
Query: 559 DFINQMACDADIVVWKSLLA 578
N+M D +++ W S++
Sbjct: 493 QVFNEME-DRNVISWTSMIT 511
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 203/408 (49%), Gaps = 46/408 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC---GSLEDARMGF 93
TY+ ++SAC+ L L LG+++H ++ DV + +++MY KC GS++D+R F
Sbjct: 233 TYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVF 292
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQ-ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
++MP+ NV+SWTA+I Q+ + + +AI+L+ +M+ + P F+F S++KAC L
Sbjct: 293 EQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP 352
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G Q++++ +K S N+LI+MY + R+ DAR F + K++ S+ +++ +
Sbjct: 353 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGY 412
Query: 213 SKLGYELEALCHFNEM----------------------------------LHHGAYQPNE 238
+K EA FNE+ L G Y+ N+
Sbjct: 413 AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 472
Query: 239 FI---FGSVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
I S++S C N A +FNE++ ++ SW ++I G A H A A+ +F +M +
Sbjct: 473 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 532
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
P+ +T ++L AC + +G + +S + G + ++ + + +L
Sbjct: 533 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVE 592
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
A+ + AD++ W +++ AC H EL R + M+ Q +PD
Sbjct: 593 AMEFINSMPLMADALVWRTLLGACRVHGNT-ELGRHAAEMILEQ-EPD 638
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 153/303 (50%), Gaps = 9/303 (2%)
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
A S M + PD T LL +CI G VH +++ G + + V N +++
Sbjct: 10 AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 69
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE-ELFRLFSRMLASQIKPDH 401
+Y+KC A L+F+ +G D VSW++++ +C +N E + F ML P+
Sbjct: 70 LYSKCGDTETARLIFEGMGNKRDLVSWSAMV-SCFANNSMEWQAIWTFLDMLELGFYPNE 128
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTG-LAFDVFVMNGLMDIYIK-CGSLGSARKLF 459
F V+ AC+ + ++ ++ KTG L DV V L+D+++K G LGSA K+F
Sbjct: 129 YCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVF 188
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ M ++V+W+ +I +AQ GC +A+ LF M G P+ T VL+AC+ +GL+
Sbjct: 189 DKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLA 248
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARA---GCVHEAEDFINQMACDADIVVWKSL 576
G L+ + + CS +VD+ A+ G V ++ QM + +++ W ++
Sbjct: 249 LGKQLHSRVIRLGLALDVCVGCS-LVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAI 306
Query: 577 LAS 579
+ +
Sbjct: 307 ITA 309
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 87/141 (61%), Gaps = 1/141 (0%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
+T I I T+A L+S +S+ ++ G ++H +L + + + N +++MY +CG++E
Sbjct: 430 DTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIE 489
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
A F++M RNV+SWT+MI G +++ A++++ +ML++G P + T+ +++ ACS
Sbjct: 490 AAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACS 549
Query: 148 GLGSVCLGRQLHAHVIKSEHG 168
+G + G Q H + + EHG
Sbjct: 550 HVGMISEG-QKHFNSMYKEHG 569
>gi|255594521|ref|XP_002536106.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223520840|gb|EEF26277.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 284/541 (52%), Gaps = 68/541 (12%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N IL Y K G+L A FD++P R+ VSWT MI G +Q + AIK+++ M++ V+
Sbjct: 10 NTILTGYAKLGTLAKAHSVFDEIPDRDSVSWTTMIVGYNQMGRFESAIKMFVAMMKDKVL 69
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P QFT ++ +C+ LG++ +G+++H+ VIK + N+L+ MY K + A+ V
Sbjct: 70 PTQFTVTNVFASCAALGALDIGKKIHSFVIKLGLSGCVPVANSLLNMYAKAGDSVMAKIV 129
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH-HGAYQPNEFIFGSVFSACSNFA 252
F + + ++SW MI+ LH HG ++ A
Sbjct: 130 FDRMRLRSISSWNIMIS------------------LHMHGGR--------------ADLA 157
Query: 253 RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
F ++ D+ +WN++I G + H EA+ LFS M + L PD T+ S+L AC
Sbjct: 158 LAQFEQMSERDVVTWNSMITGYSQHGFDKEALELFSRMLEDSLKPDRFTLASILSACANI 217
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS-------------------VLCNA 353
L G Q+HSYII+ FD + V NA+++MYAK + A
Sbjct: 218 ENLNLGKQIHSYIIRTEFDISGVVQNALISMYAKTGGVEIAQSIVEQSGISDLNVIAFTA 277
Query: 354 LL--------------VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
LL +F L K++D V+W ++I +Q+ ++ LF M +P
Sbjct: 278 LLDGYVKLGNITPARHIFDSL-KDSDVVAWTAMIVGYVQNGLNDDAMELFRIMAKEGPRP 336
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
+ T ++ + +ASL Q+H ++G V V N L+ +Y K GS+ A+++F
Sbjct: 337 NSFTLAAMLSVSSNVASLNHGKQIHASAIRSGENLSVSVGNALITMYAKAGSITDAQQVF 396
Query: 460 NFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
N ++ N D VSW+S+I+ Q G G E+++LF +M +LG+ P+ +T VGVL+AC+HVGLV
Sbjct: 397 NLIQRNKDTVSWTSMIIALGQHGLGQESIELFEKMLALGIKPDHITYVGVLSACTHVGLV 456
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
E+G + +M + + I PT H +C++DL RAG + EA FI M + D++ W SLL+
Sbjct: 457 EQGRGYFNLMTSIHKIEPTLSHYACMIDLFGRAGLLQEAFSFIENMPIEPDVIAWGSLLS 516
Query: 579 S 579
S
Sbjct: 517 S 517
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 198/456 (43%), Gaps = 115/456 (25%)
Query: 32 RIRPS--TYAGLISACSSLRSLQLGRKVHDHIL---LSKCQPDVVLQNHILNMYGKCGSL 86
++ P+ T + ++C++L +L +G+K+H ++ LS C P + N +LNMY K G
Sbjct: 67 KVLPTQFTVTNVFASCAALGALDIGKKIHSFVIKLGLSGCVP---VANSLLNMYAKAGDS 123
Query: 87 EDARMGFDK-------------------------------MPQRNVVSWTAMIAGCSQNY 115
A++ FD+ M +R+VV+W +MI G SQ+
Sbjct: 124 VMAKIVFDRMRLRSISSWNIMISLHMHGGRADLALAQFEQMSERDVVTWNSMITGYSQHG 183
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+ +A++L+ +ML+ + P +FT SI+ AC+ + ++ LG+Q+H+++I++E + QN
Sbjct: 184 FDKEALELFSRMLEDSLKPDRFTLASILSACANIENLNLGKQIHSYIIRTEFDISGVVQN 243
Query: 176 ALIAMYTK-----------------------FDRILD----------ARNVFSGIARKDV 202
ALI+MY K F +LD AR++F + DV
Sbjct: 244 ALISMYAKTGGVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDSLKDSDV 303
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------- 254
+W +MI + + G +A+ F M G +PN F ++ S SN A +
Sbjct: 304 VAWTAMIVGYVQNGLNDDAMELFRIMAKEGP-RPNSFTLAAMLSVSSNVASLNHGKQIHA 362
Query: 255 --------------------------------LFNEID-SPDLASWNALIAGVASHSNAN 281
+FN I + D SW ++I + H
Sbjct: 363 SAIRSGENLSVSVGNALITMYAKAGSITDAQQVFNLIQRNKDTVSWTSMIIALGQHGLGQ 422
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAI 340
E++ LF +M + PD +T +L AC + QG + + + + + +
Sbjct: 423 ESIELFEKMLALGIKPDHITYVGVLSACTHVGLVEQGRGYFNLMTSIHKIEPTLSHYACM 482
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+ ++ + +L A + + D ++W S++++C
Sbjct: 483 IDLFGRAGLLQEAFSFIENMPIEPDVIAWGSLLSSC 518
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
F N ++ Y K G+L A +F+ + + D VSW+++I+GY Q G + A+K+F M
Sbjct: 6 TFSWNTILTGYAKLGTLAKAHSVFDEIPDRDSVSWTTMIVGYNQMGRFESAIKMFVAMMK 65
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAG 552
V P T+ V +C+ +G ++ G +H + I G +P + ++++ A+AG
Sbjct: 66 DKVLPTQFTVTNVFASCAALGALDIGKKIHSFVIKLGLSGCVPV---ANSLLNMYAKAG 121
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 187/591 (31%), Positives = 318/591 (53%), Gaps = 49/591 (8%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+TY+ L+ +C R+ QLG+ VH ++ S + D V+ N ++++Y KCG E AR+ F+
Sbjct: 45 TTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEG 104
Query: 96 MP-QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
M +R++VSW+AM++ + N E AI ++ ML+ G P ++ F ++I+ACS +
Sbjct: 105 MGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWV 164
Query: 155 GRQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRIL-DARNVFSGIARKDVTSWGSMIAAF 212
G ++ V+K+ + + + LI M+ K L A VF + +++ +W MI F
Sbjct: 165 GEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRF 224
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------- 251
++LG +A+ F +M G Y P+ F + SV SAC+
Sbjct: 225 AQLGCARDAIDLFLDMELSG-YVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALD 283
Query: 252 ----------------------ARILFNEIDSPDLASWNALI-AGVASHSNANEAMSLFS 288
+R +F ++ ++ SW A+I A V S EA+ LF
Sbjct: 284 VCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFC 343
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+M + P+ + S+L AC Y G QV+SY +K+G S V N++++MYA+
Sbjct: 344 KMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSG 403
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ +A F L + + VS+N+I+ ++ ++EE F LF+ + + I TF ++
Sbjct: 404 RMEDARKAFDILFEK-NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLL 462
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
A + ++ Q+H + K G + + N L+ +Y +CG++ +A ++FN ME+ +V+
Sbjct: 463 SGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVI 522
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
SW+S+I G+A+ G AL++F +M G PN +T V VL+ACSHVG++ EG + M
Sbjct: 523 SWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSM 582
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
E+GI+P EH +C+VDLL R+G + EA +FIN M AD +VW++LL +
Sbjct: 583 YKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 633
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 248/500 (49%), Gaps = 53/500 (10%)
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M Q P T+ ++K+C + LG+ +H +++S + N LI++Y+K
Sbjct: 35 MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 94
Query: 187 ILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
AR +F G+ ++D+ SW +M++ F+ E +A+ F +ML G Y PNE+ F +V
Sbjct: 95 TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFY-PNEYCFAAVI 153
Query: 246 SACSNF------------------------------------------ARILFNEIDSPD 263
ACSN A +F+++ +
Sbjct: 154 RACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERN 213
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
L +W +I A A +A+ LF +M +PD T S+L AC L G Q+HS
Sbjct: 214 LVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHS 273
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSV---LCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+I++G +V V +++ MYAKC+ + ++ VF+++ ++ + +SW +II A +Q
Sbjct: 274 RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH-NVMSWTAIITAYVQSG 332
Query: 381 QAE-ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+ + E LF +M++ I+P+H +F+ V+ AC ++ Q++ Y K G+A V
Sbjct: 333 ECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVG 392
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
N L+ +Y + G + ARK F+ + ++VS+++++ GYA+ +EA LF + G+
Sbjct: 393 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 452
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAE 558
+ T +L+ + +G + +G ++ R+++ Y + C+ ++ + +R G + A
Sbjct: 453 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK--SNQCICNALISMYSRCGNIEAAF 510
Query: 559 DFINQMACDADIVVWKSLLA 578
N+M D +++ W S++
Sbjct: 511 QVFNEME-DRNVISWTSMIT 529
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 203/408 (49%), Gaps = 46/408 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC---GSLEDARMGF 93
TY+ ++SAC+ L L LG+++H ++ DV + +++MY KC GS++D+R F
Sbjct: 251 TYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVF 310
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQ-ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
++MP+ NV+SWTA+I Q+ + + +AI+L+ +M+ + P F+F S++KAC L
Sbjct: 311 EQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP 370
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G Q++++ +K S N+LI+MY + R+ DAR F + K++ S+ +++ +
Sbjct: 371 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGY 430
Query: 213 SKLGYELEALCHFNEM----------------------------------LHHGAYQPNE 238
+K EA FNE+ L G Y+ N+
Sbjct: 431 AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 490
Query: 239 FI---FGSVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
I S++S C N A +FNE++ ++ SW ++I G A H A A+ +F +M +
Sbjct: 491 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 550
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
P+ +T ++L AC + +G + +S + G + ++ + + +L
Sbjct: 551 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVE 610
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
A+ + AD++ W +++ AC H EL R + M+ Q +PD
Sbjct: 611 AMEFINSMPLMADALVWRTLLGACRVHGNT-ELGRHAAEMILEQ-EPD 656
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 153/303 (50%), Gaps = 9/303 (2%)
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
A S M + PD T LL +CI G VH +++ G + + V N +++
Sbjct: 28 AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 87
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE-ELFRLFSRMLASQIKPDH 401
+Y+KC A L+F+ +G D VSW++++ +C +N E + F ML P+
Sbjct: 88 LYSKCGDTETARLIFEGMGNKRDLVSWSAMV-SCFANNSMEWQAIWTFLDMLELGFYPNE 146
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTG-LAFDVFVMNGLMDIYIK-CGSLGSARKLF 459
F V+ AC+ + ++ ++ KTG L DV V L+D+++K G LGSA K+F
Sbjct: 147 YCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVF 206
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ M ++V+W+ +I +AQ GC +A+ LF M G P+ T VL+AC+ +GL+
Sbjct: 207 DKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLA 266
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARA---GCVHEAEDFINQMACDADIVVWKSL 576
G L+ + + CS +VD+ A+ G V ++ QM + +++ W ++
Sbjct: 267 LGKQLHSRVIRLGLALDVCVGCS-LVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAI 324
Query: 577 LAS 579
+ +
Sbjct: 325 ITA 327
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 87/141 (61%), Gaps = 1/141 (0%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
+T I I T+A L+S +S+ ++ G ++H +L + + + N +++MY +CG++E
Sbjct: 448 DTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIE 507
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
A F++M RNV+SWT+MI G +++ A++++ +ML++G P + T+ +++ ACS
Sbjct: 508 AAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACS 567
Query: 148 GLGSVCLGRQLHAHVIKSEHG 168
+G + G Q H + + EHG
Sbjct: 568 HVGMISEG-QKHFNSMYKEHG 587
>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
Length = 654
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/561 (32%), Positives = 287/561 (51%), Gaps = 45/561 (8%)
Query: 49 RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMI 108
RSLQ G+ +H I+ S V + N ++N+Y KC L +A+ F+++ ++VVSW +I
Sbjct: 20 RSLQKGKALHAQIIKSSSSC-VYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCII 78
Query: 109 AGCSQNYQENDA--IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE 166
G SQ+ + ++L+ +M P TF + A S L GR HA IK +
Sbjct: 79 NGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMD 138
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
+ ++L+ MY K +AR VF + ++ SW +MI+ ++ EAL F
Sbjct: 139 SCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFR 198
Query: 227 EMLHHGAYQPNEFIFGSVFSACS---------------------------NFARILFNEI 259
++ NEF+F SV SA + N ++ +
Sbjct: 199 -LMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKC 257
Query: 260 DSPDLA-------------SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
S D A +W+A+I G A ++++A+ LFS M + P T ++
Sbjct: 258 GSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVI 317
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
AC ++G QVH Y++K+GF+S + V A++ MYAKCS + +A F L + D
Sbjct: 318 NACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYL-QEPDI 376
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
V W S+I +Q+ + E+ L+ RM I P+ +T V+ AC+ +A+LE Q+H
Sbjct: 377 VLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHAR 436
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
K G +V + + L +Y KCG L +F M DV+SW+++I G +Q GCG EA
Sbjct: 437 TVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEA 496
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
L+LF M+ G P+ VT V +L+ACSH+GLVE G +R+M +E+G+ P EH +C+VD
Sbjct: 497 LELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVD 556
Query: 547 LLARAGCVHEAEDFINQMACD 567
+L+RAG + EA +F D
Sbjct: 557 ILSRAGKLKEAIEFTESATID 577
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/469 (30%), Positives = 232/469 (49%), Gaps = 53/469 (11%)
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+ LHA +IKS IA N+L+ +Y K R+ +A+ VF I KDV SW +I +S+
Sbjct: 25 GKALHAQIIKSSSSCVYIA-NSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQ 83
Query: 215 LGYELEALCHFNEMLHHGAYQ---PNEFIFGSVFSACSNF-------------------- 251
G H E+ + PN F VF+A S
Sbjct: 84 HG--PSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCR 141
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
AR +F+ + + SW +I+G AS A EA+ LF MR
Sbjct: 142 DVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMR 201
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
E + S+L A + G Q+H +K G S V V NA++TMYAKC L
Sbjct: 202 REEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLD 261
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+AL F E + +S++W+++I Q +++ +LFS M S I+P TF V+ AC
Sbjct: 262 DALQTF-ETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINAC 320
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ + + Q+H Y+ K G ++VM L+D+Y KC S+ ARK F++++ PD+V W+
Sbjct: 321 SDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWT 380
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMEN 530
S+I GY Q G ++AL L+ RM G+ PN +T+ VL ACS + +E+G ++ R ++
Sbjct: 381 SMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKY 440
Query: 531 EYGI-IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+G+ +P S + + A+ GC+ + +M D++ W ++++
Sbjct: 441 GFGLEVPI---GSALSTMYAKCGCLKDGTLVFRRMPA-RDVISWNAMIS 485
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/467 (30%), Positives = 224/467 (47%), Gaps = 57/467 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHD-HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
T+AG+ +A S+L GR H I + C+ DV + + ++NMY K G +AR FD
Sbjct: 110 TFAGVFTAASTLVDAAGGRLAHAVAIKMDSCR-DVFVGSSLMNMYCKAGLTPEARKVFDT 168
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP+RN VSW MI+G + +A+ L+ M + +F F S++ A + V G
Sbjct: 169 MPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNG 228
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+Q+H +K+ S + NAL+ MY K + DA F + K+ +W +MI ++
Sbjct: 229 KQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQS 288
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G +AL F+ M H +P+EF F V +ACS+
Sbjct: 289 GDSDKALKLFSSM-HLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYV 347
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR F+ + PD+ W ++I G + +A+SL+ M +
Sbjct: 348 MTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGI 407
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
LP+ LT+ S+L AC L QG Q+H+ +K GF VP+ +A+ TMYAKC L + L
Sbjct: 408 LPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTL 467
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF+ + D +SWN++I+ Q+ +E LF M KPD++TF +++ AC+ M
Sbjct: 468 VFRRMPAR-DVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMG 526
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNG-------LMDIYIKCGSLGSA 455
+V + Y + FD F M+ ++DI + G L A
Sbjct: 527 ---LVERGWGYFR---MMFDEFGMDPRVEHYACMVDILSRAGKLKEA 567
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 137/237 (57%), Gaps = 12/237 (5%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IRPS T+ G+I+ACS L + G++VHD++L + + + +++MY KC S+ DAR
Sbjct: 306 IRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDAR 365
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
GFD + + ++V WT+MI G QN + DA+ LY +M G++P + T S++KACS L
Sbjct: 366 KGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLA 425
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G+Q+HA +K G + +AL MY K + D VF + +DV SW +MI+
Sbjct: 426 ALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMIS 485
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNE 258
S+ G EAL F EM G +P+ F ++ SACS+ + R++F+E
Sbjct: 486 GLSQNGCGKEALELFEEMQLEGT-KPDYVTFVNILSACSHMGLVERGWGYFRMMFDE 541
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 160/344 (46%), Gaps = 42/344 (12%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S Q L EAL + + + ++SA + + G+++H + +
Sbjct: 181 ISGYASQKLAAEALGLFRLMRREEEGE-NEFVFTSVLSALTLPELVNNGKQIHCIAVKNG 239
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
V + N ++ MY KCGSL+DA F+ +N ++W+AMI G +Q+ + A+KL+
Sbjct: 240 LLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFS 299
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M SG+ P +FTF +I ACS LG+ G+Q+H +++K S + AL+ MY K
Sbjct: 300 SMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCS 359
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I+DAR F + D+ W SMI + + G +AL + M G PNE SV
Sbjct: 360 SIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGIL-PNELTMASVL 418
Query: 246 SACSNFA----------------------------------------RILFNEIDSPDLA 265
ACS+ A ++F + + D+
Sbjct: 419 KACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVI 478
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
SWNA+I+G++ + EA+ LF EM+ PD +T ++L AC
Sbjct: 479 SWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSAC 522
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 134/285 (47%), Gaps = 8/285 (2%)
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
LP + + L +L +G +H+ IIK S V + N+++ +YAKC L A
Sbjct: 3 LPSNRSFFTALLQYTHNRSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKF 61
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQ--AEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
VF+ + +N D VSWN II QH + + LF RM A P+ TF V A +
Sbjct: 62 VFERI-QNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAST 120
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ H K DVFV + LM++Y K G ARK+F+ M + VSW+++
Sbjct: 121 LVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATM 180
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I GYA EAL LF MR N VL+A + LV G ++ I G
Sbjct: 181 ISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKN-G 239
Query: 534 IIPTREHCSCVVDLLARAGCVHEA-EDFINQMACDADIVVWKSLL 577
++ + +V + A+ G + +A + F + + D + + W +++
Sbjct: 240 LLSIVSVGNALVTMYAKCGSLDDALQTF--ETSSDKNSITWSAMI 282
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 187/570 (32%), Positives = 291/570 (51%), Gaps = 70/570 (12%)
Query: 45 CSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSW 104
C L+ + +K+H HI+ + P++ L N++++ Y K + AR FD+MPQRN+ SW
Sbjct: 19 CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78
Query: 105 TAMIAGCSQ---------------------------NYQEN----DAIKLYIQMLQSGVM 133
+++ S+ Y ++K Y ML +G
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138
Query: 134 P-GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
+ +++ S G V LG Q+H HV+K S++ + L+ MY+K + AR
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF- 251
F + K+V + ++IA + CS
Sbjct: 199 AFDEMPEKNVVMYNTLIAGLMR---------------------------------CSRIE 225
Query: 252 -ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+R LF ++ D SW A+IAG + EA+ LF EMR L D T S+L AC
Sbjct: 226 DSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACG 285
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSVSW 369
G + L +G QVH+YII+ + N+ V +A++ MY KC + +A VF+++ KN VSW
Sbjct: 286 GVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNV--VSW 343
Query: 370 NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
+++ Q+ +EE ++F M + I+PD T V+ +CA +ASLE Q HC
Sbjct: 344 TAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALV 403
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
+GL + V N L+ +Y KCGS+ + +LF+ M D VSW++L+ GYAQFG +E L+L
Sbjct: 404 SGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRL 463
Query: 490 FTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLA 549
F M + G P+ VT +GVL+ACS GLV++G ++ M E+ IIP +H +C++DL +
Sbjct: 464 FESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFS 523
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLLAS 579
RAG + EA FIN+M D + W SLL+S
Sbjct: 524 RAGRLEEARKFINKMPFSPDAIGWASLLSS 553
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 218/476 (45%), Gaps = 84/476 (17%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S+ + +++ AY+ N + + ++ S + LG +VH H++
Sbjct: 110 NSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVV 169
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVV-------------------- 102
Q V + + +++MY K G + AR FD+MP++NVV
Sbjct: 170 KFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQ 229
Query: 103 -----------SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
SWTAMIAG +QN + +AI L+ +M + Q+TFGS++ AC G+ +
Sbjct: 230 LFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMA 289
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ G+Q+HA++I++++ ++ +AL+ MY K I A VF + K+V SW +M+
Sbjct: 290 LQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVG 349
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------------- 254
+ + GY EA+ F +M ++G +P++F GSV S+C+N A +
Sbjct: 350 YGQNGYSEEAVKIFCDMQNNGI-EPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLIS 408
Query: 255 -----------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
LF+E+ D SW AL++G A ANE + LF M
Sbjct: 409 FITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESML 468
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN---AILTMYAKCS 348
PD +T +L AC + +G Q+ +IK +P+ + ++ ++++
Sbjct: 469 AHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKE--HRIIPIEDHYTCMIDLFSRAG 526
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRLFSRMLASQI 397
L A ++ + D++ W S++++C H AE L +L AS I
Sbjct: 527 RLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYI 582
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 134/287 (46%), Gaps = 32/287 (11%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN Y+E V N I T +IS+C++L SL+ G + H L+S +
Sbjct: 352 QNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFIT 411
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ N ++ +YGKCGS+ED+ F +M + VSWTA+++G +Q + N+ ++L+ ML G
Sbjct: 412 VSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHG 471
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILD 189
P + TF ++ ACS G V G Q+ +IK EH I + +I ++++ R+ +
Sbjct: 472 FKPDKVTFIGVLSACSRAGLVQKGNQIFESMIK-EHRIIPIEDHYTCMIDLFSRAGRLEE 530
Query: 190 ARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
AR + + D W S++++ C F+ + G + +
Sbjct: 531 ARKFINKMPFSPDAIGWASLLSS-----------CRFHRNMEIGKWAAESLL-------- 571
Query: 249 SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+++ + AS+ L + A+ E +L MRD+ L
Sbjct: 572 ---------KLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGL 609
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/489 (34%), Positives = 265/489 (54%), Gaps = 34/489 (6%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FD + + N++ W M G + + A+ LY+ M+ G++P +TF ++KAC+ +
Sbjct: 60 FDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAF 119
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+Q+H HV+K L +LIAMY K R DAR VF + +DV S+ ++I +
Sbjct: 120 REGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGY 179
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
+ GY A+ +F+EI D+ SWNALI+
Sbjct: 180 ASNGYIXS-------------------------------AQKMFDEIPVKDVVSWNALIS 208
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A N EA+ LF EM + PD T+ ++L AC ++ G QVHS+I GF S
Sbjct: 209 GYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGS 268
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N+ + NA++ +Y KC + A +F+ L D +SWN++I N +E LF M
Sbjct: 269 NLKIVNALIDLYIKCGEVETASGLFEGLSYK-DVISWNTLIGGYTHMNLYKEALLLFQEM 327
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFDVFVMNGLMDIYIKCG 450
L S P+ +T ++ ACA + ++++ +H YI K G++ + L+D+Y KCG
Sbjct: 328 LRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCG 387
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ +A+++F+ M N + SW+++I G+A G + A +F+RMR G+ P+ +T VG+L+
Sbjct: 388 DIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLS 447
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSH G+++ G H++R M +Y I P EH C++DLL +G EAE+ IN M D D
Sbjct: 448 ACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDG 507
Query: 571 VVWKSLLAS 579
V+W SLL +
Sbjct: 508 VIWCSLLKA 516
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 183/371 (49%), Gaps = 36/371 (9%)
Query: 229 LHHGAYQPNEFIFGSVFSACSN---FARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
LH+ Y ++ I SV S + +A +F+ I P+L WN + G A S+ A+
Sbjct: 30 LHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALY 89
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
L+ M L+P+ T LL AC +G Q+H +++K+G D ++ V +++ MY
Sbjct: 90 LYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYV 149
Query: 346 KCSVLCNALLVFKELGKN------------------------------ADSVSWNSIIAA 375
K +A VF + D VSWN++I+
Sbjct: 150 KNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISG 209
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
+ +E LF M+ + +KPD T V+ ACA+ AS+E+ Q+H +I G +
Sbjct: 210 YAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSN 269
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
+ ++N L+D+YIKCG + +A LF + DV+SW++LI GY EAL LF M
Sbjct: 270 LKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 329
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
G SPN VT++ +L AC+H+G ++ G +H+Y I + G+ + ++D+ A+ G
Sbjct: 330 SGESPNEVTMLSILPACAHLGAIDIGRWIHVY-IDKRLKGVSNPSSLRTSLIDMYAKCGD 388
Query: 554 VHEAEDFINQM 564
+ A+ + M
Sbjct: 389 IEAAQQVFDSM 399
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 184/421 (43%), Gaps = 75/421 (17%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK- 95
T+ L+ AC+ ++ + G+++H H+L C D+ + ++ MY K G EDAR FD+
Sbjct: 105 TFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQS 164
Query: 96 ------------------------------MPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+P ++VVSW A+I+G ++ +A++L+
Sbjct: 165 SHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFK 224
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M+++ V P + T +++ AC+ S+ LGRQ+H+ + GS+L NALI +Y K
Sbjct: 225 EMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 284
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A +F G++ KDV SW ++I ++ + EAL F EML G PNE S+
Sbjct: 285 EVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-SPNEVTMLSIL 343
Query: 246 SACSNFARI------------------------------------------LFNEIDSPD 263
AC++ I +F+ + +
Sbjct: 344 PACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRS 403
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV-H 322
L+SWNA+I G A H AN A +FS MR + PD +T LL AC L G +
Sbjct: 404 LSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFR 463
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
S + ++ + + A + + + D V W S++ AC H
Sbjct: 464 SMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNV 523
Query: 383 E 383
E
Sbjct: 524 E 524
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 160/319 (50%), Gaps = 17/319 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + Y EAL + TN++ ST ++SAC+ S++LGR+VH I
Sbjct: 204 NALISGYAETGNYKEALELFK-EMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWID 262
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ + N ++++Y KCG +E A F+ + ++V+SW +I G + +A+
Sbjct: 263 DHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALL 322
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA--QNALIAM 180
L+ +ML+SG P + T SI+ AC+ LG++ +GR +H ++ K G + + +LI M
Sbjct: 323 LFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDM 382
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K I A+ VF + + ++SW +MI F+ G A F+ M G +P++
Sbjct: 383 YAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGI-EPDDIT 441
Query: 241 FGSVFSACS-----NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEM 290
F + SACS + R +F + +P L + +I + EA + + M
Sbjct: 442 FVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSM 501
Query: 291 RDRELLPDGLTVHSLLCAC 309
E+ PDG+ SLL AC
Sbjct: 502 ---EMDPDGVIWCSLLKAC 517
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/531 (35%), Positives = 273/531 (51%), Gaps = 49/531 (9%)
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP+RNVVSW ++I+G +Q ++ + L+ + S + +FTF + + C + LG
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R +HA + S G ++ N+LI MY K RI AR VF D SW S+IA + ++
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-SNF----------------------- 251
G E L +ML HG N + GS AC SNF
Sbjct: 121 GSNDEMLRLLVKMLRHG-LNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDV 179
Query: 252 ------------------ARILFNEIDSPDLASWNALIAG-----VASHSNANEAMSLFS 288
A +F + P++ +NA+IAG + ANEAM LF
Sbjct: 180 VVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFF 239
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
EM+ R + P T S+L AC G Q+H+ I K S+ + NA++ +Y+
Sbjct: 240 EMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSG 299
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ + L F K D VSW S+I +Q+ Q E LF +L S KPD T + ++
Sbjct: 300 SIEDGLKCFHSTPK-LDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIML 358
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
ACA +A+++ Q+H Y KTG+ + N + +Y KCG + SA F +NPD+V
Sbjct: 359 SACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIV 418
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
SWS +I AQ GC EA+ LF M+ G++PN +T +GVL ACSH GLVEEGL + IM
Sbjct: 419 SWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIM 478
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++GI P +H +C+VDLL RAG + EAE FI + D V+W+SLL++
Sbjct: 479 KKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSA 529
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 145/523 (27%), Positives = 243/523 (46%), Gaps = 56/523 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + Y+E + + ++ +++R+ T++ +S C L+LGR +H I
Sbjct: 10 NSLISGYTQMGFYHEVMNLFKEARM-SDLRLDKFTFSNALSVCGRTLDLRLGRLIHALIT 68
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+S V+L N +++MY KCG ++ AR+ F+ + + VSW ++IAG + ++ ++
Sbjct: 69 VSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLR 128
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSG--LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
L ++ML+ G+ + GS +KAC S+ G+ LH +K ++ AL+
Sbjct: 129 LLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDT 188
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL-----GYELEALCHFNEMLHHGAYQ 235
Y K + DA +F + +V + +MIA F ++ + EA+ F EM G +
Sbjct: 189 YAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRG-MK 247
Query: 236 PNEFIFGSVFSACSNF----------ARIL------------------------------ 255
P+EF F S+ ACS A+I
Sbjct: 248 PSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKC 307
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F+ D+ SW +LI G + ++LF E+ PD T+ +L AC +
Sbjct: 308 FHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAV 367
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
G Q+H+Y IK G + + N+ + MYAKC + +A + FKE KN D VSW+ +I++
Sbjct: 368 KSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKET-KNPDIVSWSVMISS 426
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAF 434
QH A+E LF M S I P+HITF V+ AC+ +E + + K G+
Sbjct: 427 NAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITP 486
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLF---NFMENPDVVSWSSLI 474
+V ++D+ + G L A F +P V W SL+
Sbjct: 487 NVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDP--VMWRSLL 527
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 168/387 (43%), Gaps = 68/387 (17%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
NEA+ + F + ++ T++ ++ ACS++ + + G+++H I Q D + N
Sbjct: 232 NEAMYLF-FEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNA 290
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
++ +Y GS+ED F P+ +VVSWT++I G QN Q + L+ ++L SG P
Sbjct: 291 LVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPD 350
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
+FT ++ AC+ L +V G Q+HA+ IK+ G+ I QN+ I MY K I A F
Sbjct: 351 EFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFK 410
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL 255
D+ SW MI++ ++ G EA+ F E++ PN F V ACS+ +
Sbjct: 411 ETKNPDIVSWSVMISSNAQHGCAKEAVDLF-ELMKGSGIAPNHITFLGVLVACSHGGLV- 468
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
E + F M+ G+T + ACI L
Sbjct: 469 -------------------------EEGLRYFEIMKKDH----GITPNVKHSACIVDLLG 499
Query: 316 YQGM--QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
G + S+I+ GF+ D V W S++
Sbjct: 500 RAGRLAEAESFIMDSGFE--------------------------------GDPVMWRSLL 527
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPD 400
+AC H + R+ R++ +++P+
Sbjct: 528 SACRVHKATDTGKRVAERVI--ELEPE 552
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 195/586 (33%), Positives = 297/586 (50%), Gaps = 47/586 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+YA ++ R G+ +H HIL D+ QN +LN Y G LEDA FD+M
Sbjct: 5 SYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEM 64
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK--ACSGLGSVCL 154
P N VS+ + G S+++Q A +L +++ + G QF F +++K L CL
Sbjct: 65 PLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCL 124
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
+HA+V K H + ALI Y+ + AR VF GI KD+ SW M+A +++
Sbjct: 125 S--VHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAE 182
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------- 251
++L F +M G Y+PN F + +C+
Sbjct: 183 NYCHEDSLLLFCQMRIMG-YRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLY 241
Query: 252 -----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
A+ F E+ DL W+ +I+ A + EA+ LF MR
Sbjct: 242 VGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSS 301
Query: 295 -LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
++P+ T S+L AC + L G Q+HS ++K+G DSNV V NA++ +YAKC + N+
Sbjct: 302 VVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENS 361
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
+ +F + V+WN+II +Q E+ LFS ML I+P +T++ V+ A A
Sbjct: 362 VKLFTG-STEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASAS 420
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ +LE Q+H KT D V N L+D+Y KCG + AR F+ M+ D VSW++L
Sbjct: 421 LVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNAL 480
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I GY+ G G EAL LF M+ PN +T VGVL+ACS+ GL+++G ++ M +YG
Sbjct: 481 ICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYG 540
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
I P EH +C+V LL R+G EA I ++ ++VW++LL +
Sbjct: 541 IEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGA 586
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 151/302 (50%), Gaps = 14/302 (4%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+A ++ AC+SL L LG ++H +L +V + N ++++Y KCG +E++ F
Sbjct: 309 TFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGS 368
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++N V+W +I G Q A+ L+ ML + P + T+ S+++A + L ++ GR
Sbjct: 369 TEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGR 428
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H+ IK+ + + N+LI MY K RI DAR F + ++D SW ++I +S G
Sbjct: 429 QIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHG 488
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARILFNEIDSPDLAS 266
+EAL F +M+ +PN+ F V SACSN F +L + P +
Sbjct: 489 LGMEALNLF-DMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEH 547
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
+ ++ + +EA+ L E+ P + +LL AC+ L G ++
Sbjct: 548 YTCMVWLLGRSGQFDEAVKLIGEI---PFQPSVMVWRALLGACVIHKNLDLGKVCAQRVL 604
Query: 327 KM 328
+M
Sbjct: 605 EM 606
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/536 (32%), Positives = 277/536 (51%), Gaps = 41/536 (7%)
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFG 140
K G L AR FDKM R+ +SWT +IAG +A+ L+ M + G QF
Sbjct: 69 KQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMIS 128
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
+KAC+ ++C G LH +KS + +ALI MY K +I VF + +
Sbjct: 129 VALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTR 188
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEM------------------------LHHG---- 232
+V SW ++IA GY +E L +F+EM LHHG
Sbjct: 189 NVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIH 248
Query: 233 ------AYQPNEFI---FGSVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNAN 281
+ + F+ ++++ C ++ LF ++ PD+ SW LI+
Sbjct: 249 TQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEE 308
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
A+ F MR + P+ T +++ +C G Q+H +++++G + + V N+I+
Sbjct: 309 HAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSII 368
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
T+Y+KC +L +A LVF + + D +SW++II+ Q A+E F S M KP+
Sbjct: 369 TLYSKCGLLKSASLVFHGITRK-DIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNE 427
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
+ V+ C MA LE Q+H ++ G+ + V + ++ +Y KCGS+ A K+FN
Sbjct: 428 FALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNG 487
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
M+ D++SW+++I GYA+ G EA+ LF ++ S+G+ P+ V +GVLTAC+H G+V+ G
Sbjct: 488 MKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLG 547
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ + +M N Y I P++EH C++DLL RAG + EAE I M D VVW +LL
Sbjct: 548 FYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLL 603
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 203/447 (45%), Gaps = 51/447 (11%)
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
N+ + K ++ AR +F + +D SW ++IA + EAL F+ M H
Sbjct: 61 NSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGP 120
Query: 235 QPNEFIFGSVFSACSNFARILFNE---------------------ID------------- 260
Q ++F+ AC+ I F E ID
Sbjct: 121 QRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCR 180
Query: 261 ------SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+ ++ SW A+IAG+ E + FSEM ++ D T L A
Sbjct: 181 VFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSL 240
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
L+ G +H+ IK GFD + V N + TMY KC + +F+++ + D VSW ++I+
Sbjct: 241 LHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKM-RMPDVVSWTTLIS 299
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
+Q + E F RM S + P+ TF V+ +CA +A+ + Q+H ++ + GL
Sbjct: 300 TYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVN 359
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
+ V N ++ +Y KCG L SA +F+ + D++SWS++I Y+Q G EA + MR
Sbjct: 360 ALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMR 419
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEG----LHLYRIMENEYGIIPTREHCSCVVDLLAR 550
G PN L VL+ C + L+E+G HL I + ++ S ++ + ++
Sbjct: 420 REGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVH-----SAIISMYSK 474
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLL 577
G V EA N M + DI+ W +++
Sbjct: 475 CGSVQEASKIFNGMKIN-DIISWTAMI 500
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 138/543 (25%), Positives = 237/543 (43%), Gaps = 54/543 (9%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+ AC+ ++ G +H + S V + + +++MY K G +E F+KM RNV
Sbjct: 131 LKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNV 190
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
VSWTA+IAG + + + +M +S V TF +KA + + G+ +H
Sbjct: 191 VSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQ 250
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
IK N L MY K + +F + DV SW ++I+ + ++G E A
Sbjct: 251 TIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHA 310
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------------ 251
+ F M PN++ F +V S+C+N
Sbjct: 311 VEAFKRM-RKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIIT 369
Query: 252 ----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
A ++F+ I D+ SW+ +I+ + A EA S MR P+
Sbjct: 370 LYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFA 429
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
+ S+L C L QG QVH++++ +G D V +AI++MY+KC + A +F +
Sbjct: 430 LSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMK 489
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
N D +SW ++I +H ++E LF ++ + +KPD++ F V+ AC +++
Sbjct: 490 IN-DIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGF 548
Query: 422 QLHCYITKTGLAFDVFVMNG-LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYAQ 479
+T G L+D+ + G L A + M + D V WS+L+
Sbjct: 549 YYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRV 608
Query: 480 FGCGDEALKLFTRMRSLGVSPNL----VTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
G D +T + L + PN +TL + A G +E H+ ++M+++ G+I
Sbjct: 609 HGDVDRG--RWTAEQLLQLDPNSAGTHITLANIYAA---KGRWKEAAHIRKLMKSK-GVI 662
Query: 536 PTR 538
R
Sbjct: 663 KER 665
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 195/443 (44%), Gaps = 70/443 (15%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+A + A + L G+ +H + + N + MY KCG + F+KM
Sbjct: 227 TFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKM 286
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+VVSWT +I+ Q +E A++ + +M +S V P ++TF ++I +C+ L + G
Sbjct: 287 RMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGE 346
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H HV++ + L N++I +Y+K + A VF GI RKD+ SW ++I+ +S+ G
Sbjct: 347 QIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGG 406
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
Y EA + + M G +PNEF SV S C + A +
Sbjct: 407 YAKEAFDYLSWMRREGP-KPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVH 465
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+FN + D+ SW A+I G A H + EA++LF ++ L
Sbjct: 466 SAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLK 525
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA------------ILTMY 344
PD + +L AC H+ ++ +GF + + N ++ +
Sbjct: 526 PDYVMFIGVLTAC-----------NHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLL 574
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD---- 400
+ L A + + + + D V W++++ AC H + ++L Q+ P+
Sbjct: 575 CRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLL--QLDPNSAGT 632
Query: 401 HITFNDVMGACAKMASLEMVTQL 423
HIT ++ A + + +L
Sbjct: 633 HITLANIYAAKGRWKEAAHIRKL 655
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
Query: 34 RPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+P+ +A ++S C S+ L+ G++VH H+L + ++ + I++MY KCGS+++A
Sbjct: 424 KPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASK 483
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
F+ M +++SWTAMI G +++ +AI L+ ++ G+ P F ++ AC+ G
Sbjct: 484 IFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGM 543
Query: 152 VCLG 155
V LG
Sbjct: 544 VDLG 547
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
++ +N + +K G L AR +F+ M + D +SW++LI GY EAL LF+ M
Sbjct: 56 NMLELNSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMW 115
Query: 495 -SLGVSPNLVTLVGVLTACSHVGL---VEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
G + + L AC+ +G+ E LH + + + G+I + S ++D+ +
Sbjct: 116 VHPGPQRDQFMISVALKACA-LGVNICFGELLHGFSV---KSGLIHSVFVSSALIDMYMK 171
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLA 578
G + + +M ++V W +++A
Sbjct: 172 VGKIEQGCRVFEKMMTR-NVVSWTAIIA 198
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 201/652 (30%), Positives = 326/652 (50%), Gaps = 79/652 (12%)
Query: 1 FSNDYVSSLCKQ----NLYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLG 54
+++VS L Q + +++A+ Y N + P +A ++ A + ++ L LG
Sbjct: 48 LPSEWVSHLRSQTQSSSTFHQAISTY---TNMVTAGVPPDNFAFPAVLKATAGIQDLNLG 104
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
+++H H+ + N ++NMYGKCG ++ AR FD++ R+ VSW +MI +
Sbjct: 105 KQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRF 164
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL-GSVCLGRQLHAHVIKSEHGSHLIA 173
+ A+ L+ ML V P FT S+ ACS L + LG+Q+HA V+++
Sbjct: 165 EEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDW-RTFT 223
Query: 174 QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA 233
NAL+ MY K R+ +A+ +F KD+ SW ++I++ S+ EAL + + ML G
Sbjct: 224 NNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGV 283
Query: 234 YQPNEFIFGSVFSACSNF-----------------------------------------A 252
+PN SV ACS+
Sbjct: 284 -RPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKG 342
Query: 253 RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR-DRELLPDGLTVHSLLCACIG 311
R++F+ + +A WNA+IAG + EA+ LF EM + L P+ +T+ S+L AC+
Sbjct: 343 RLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVR 402
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+ +HS ++K GF+ + V NA++ MY++ + A +F + + D VSWN+
Sbjct: 403 CESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRK-DIVSWNT 461
Query: 372 IIAA---CLQHNQAEELFRLFSRMLASQ---------------IKPDHITFNDVMGACAK 413
+I C +H+ A L R A +KP+ +T V+ CA
Sbjct: 462 MITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAA 521
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+A+L ++H Y K L+ DV V + L+D+Y KCG L +R +F M +V++W+ L
Sbjct: 522 LAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVL 581
Query: 474 ILGYAQFGCGDEALKLFTRMRSLG-----VSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
I+ Y G G+EALKLF RM G + PN VT + + + SH G+V+EGL+L+ M
Sbjct: 582 IMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTM 641
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV-VWKSLLAS 579
+ ++GI PT +H +C+VDLL R+G + EA + I M + V W SLL +
Sbjct: 642 KAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGA 693
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 194/450 (43%), Gaps = 73/450 (16%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +SSL + + + EAL+ Y + +R T A ++ ACS L L G+++H +L
Sbjct: 256 NTIISSLSQNDRFEEALL-YLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVL 314
Query: 63 LSKCQPDVVLQNHI----LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
++ D++ + + ++MY C E R+ FD M +R + W AMIAG +N +
Sbjct: 315 MNN---DLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDY 371
Query: 119 DAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
+AI+L+++M+ + G+ P T S++ AC S +H+ V+K QNAL
Sbjct: 372 EAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNAL 431
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA---- 233
+ MY++ RI AR++F + RKD+ SW +MI + G +AL ++M A
Sbjct: 432 MDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRI 491
Query: 234 -------------YQPNEFIFGSVFSACS------------------------------- 249
+PN +V C+
Sbjct: 492 NTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALV 551
Query: 250 ---------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-----RDREL 295
N +R +F ++ ++ +WN LI H EA+ LF M +RE+
Sbjct: 552 DMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREI 611
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
P+ +T ++ + + +G+ + ++ K G + ++ + + + A
Sbjct: 612 RPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAY 671
Query: 355 LVFKELGKNADSV-SWNSIIAACLQHNQAE 383
+ K + N V +W+S++ AC H E
Sbjct: 672 NLIKTMPSNMKKVDAWSSLLGACKIHQNLE 701
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 157/351 (44%), Gaps = 41/351 (11%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
+D ++N N ++P+ T ++ C++L +L G+++H + + DV + + +++
Sbjct: 493 TFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVD 552
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG-----VM 133
MY KCG L +R F++M RNV++W +I + + +A+KL+ +M++ G +
Sbjct: 553 MYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIR 612
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILDAR 191
P + T+ +I + S G V G L + +K++HG + + L+ + + +I +A
Sbjct: 613 PNEVTYIAIFASLSHSGMVDEGLNLF-YTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAY 671
Query: 192 NVFSGIAR--KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY--QPNEFIFGSVFSA 247
N+ + K V +W S++ A K+ LE E+ + PN +G+ S
Sbjct: 672 NLIKTMPSNMKKVDAWSSLLGA-CKIHQNLE----IGEIAAKNLFVLDPNVLDYGTKQSM 726
Query: 248 CSNFARILFNEIDSPDLASW-------NALIAGVASHSNANEAM----SLFSEMRDRELL 296
++ + SW + +AG SH + E +L M+ +
Sbjct: 727 LGR--KMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKEGYV 784
Query: 297 PDGLTV---------HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
PD V ++LC RL + G+ S + N+ VCN
Sbjct: 785 PDTSCVLHNVGEEEKETMLCGHSERLAIAFGLLNTSPGTTIRVAKNLRVCN 835
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 185/586 (31%), Positives = 297/586 (50%), Gaps = 46/586 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++ L+ C+ + LQ G+ +H +L + V L N ++N+Y KCGS+ A++ F+ +
Sbjct: 12 SFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESI 71
Query: 97 PQRNVVSWTAMIAGCSQN--YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
++VVSW +I G SQ + ++L+ +M +P TF + A S
Sbjct: 72 TNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFG 131
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G Q HA IK+ + + ++LI MY K +LDAR VF I ++ SW ++I+ ++
Sbjct: 132 GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAM 191
Query: 215 LGYELEALCHFNEML-HHGAYQPNEFIFGSVFSA-------------------------- 247
EA F M GA+ ++FI+ SV SA
Sbjct: 192 ERMAFEAWELFXLMRREEGAH--DKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIA 249
Query: 248 --------------CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
C + A F D +W+A+I G A +++EA++LF M
Sbjct: 250 SVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLN 309
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
P T ++ AC L +G Q+H Y +K G++ + A++ MYAKC L +A
Sbjct: 310 GNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDA 369
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
F L K D V W S+I+ Q+ + E L+ RM +I P +T V+ AC+
Sbjct: 370 RKGFDYL-KEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSS 428
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+A+LE Q+H K G + +V + + L +Y KCGSL +F M + D+++W+++
Sbjct: 429 LAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAM 488
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I G +Q G G +AL+LF +R P+ VT V VL+ACSH+GLVE G +R+M +E+G
Sbjct: 489 ISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFG 548
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
I+P EH +C+VD+L+RAG +HE ++FI D + +W+ LL +
Sbjct: 549 IVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGA 594
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 230/488 (47%), Gaps = 48/488 (9%)
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P +F ++ C+ + G+ +HA ++++ S + N+L+ +Y K I+ A+ V
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 194 FSGIARKDVTSWGSMIAAFSK---LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-- 248
F I KDV SW +I +S+ +GY + F M PN F VF+A
Sbjct: 68 FESITNKDVVSWNCLINGYSQKGTVGYSF-VMELFQRMRAENTL-PNGHTFSGVFTAASS 125
Query: 249 -----------------SNF---------------------ARILFNEIDSPDLASWNAL 270
SNF AR +F+ I + SW +
Sbjct: 126 SPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATI 185
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I+G A A EA LF MR E D S+L A ++ G Q+H +K G
Sbjct: 186 ISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGL 245
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
S V NA++TMY KC L +AL F EL + D ++W+++I Q + E LF
Sbjct: 246 LSIASVGNALVTMYGKCGCLDDALKTF-ELSGDKDDITWSAMITGYAQAGDSHEALNLFY 304
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
M + KP TF V+ AC+ + +LE Q+H Y K G ++ M L+D+Y KCG
Sbjct: 305 NMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCG 364
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
SL ARK F++++ PD+V W+S+I GYAQ G + AL L+ RM+ + P+ +T+ VL
Sbjct: 365 SLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLR 424
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACS + +E+G ++ +YG S + + A+ G + + +M DI
Sbjct: 425 ACSSLAALEQGKQIH-AQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMP-SRDI 482
Query: 571 VVWKSLLA 578
+ W ++++
Sbjct: 483 MTWNAMIS 490
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 5/286 (1%)
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
L P + LL C + L +G +H+ +++ G S+V + N+++ +YAKC + A
Sbjct: 6 LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELF--RLFSRMLASQIKPDHITFNDVMGACA 412
LVF+ + N D VSWN +I Q F LF RM A P+ TF+ V A +
Sbjct: 66 LVFESI-TNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAAS 124
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
Q H KT +DVFV + L+++Y K G + ARK+F+ + + VSW++
Sbjct: 125 SSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWAT 184
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
+I GYA EA +LF MR + + VL+A + LV G ++ + +
Sbjct: 185 IISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIH-CLALKN 243
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G++ + +V + + GC+ +A +++ D D + W +++
Sbjct: 244 GLLSIASVGNALVTMYGKCGCLDDALKTF-ELSGDKDDITWSAMIT 288
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 76/127 (59%), Gaps = 2/127 (1%)
Query: 32 RIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
RI P T A ++ ACSSL +L+ G+++H + +V + + + MY KCGSLED
Sbjct: 411 RIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDG 470
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
+ F +MP R++++W AMI+G SQN + A++L+ ++ P TF +++ ACS +
Sbjct: 471 NLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHM 530
Query: 150 GSVCLGR 156
G V G+
Sbjct: 531 GLVERGK 537
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 182/619 (29%), Positives = 322/619 (52%), Gaps = 44/619 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++S + L +E Y + + R ST+A ++SA +++ + GR++H +
Sbjct: 293 NAVIASYSQSGLDSEVFGLYKDMKKQGLMPTR-STFASILSAAANMTAFDEGRQIHATAV 351
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+V + + ++N+Y K G + DA+ FD ++N+V W A++ G QN + + I+
Sbjct: 352 KHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQ 411
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ M ++ + FTF S++ AC L S+ LGRQ+H IK+ + L NA++ MY+
Sbjct: 412 MFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYS 471
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I A+ +FS I KD SW ++I + E EA+ M +G +E F
Sbjct: 472 KLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYG-IALDEVSFA 530
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
+ +ACSN +R + +D+
Sbjct: 531 TAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDAS 590
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+ NALI G+ ++ +EA+ LF ++ P T S+L C ++ G QVH
Sbjct: 591 SIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVH 650
Query: 323 SYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
Y +K + + + +++ +Y KC +L +A + +E+ + + V W + I+ Q+
Sbjct: 651 CYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGY 710
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+ + +F RM + ++ D TF V+ AC++MA+L ++H I K+G +
Sbjct: 711 SVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSA 770
Query: 442 LMDIYIKCGSLGSARKLFNFMEN-PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
LMD+Y KCG + S+ ++F ++N +++ W+S+I+G+A+ G +EAL LF +M+ + P
Sbjct: 771 LMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKP 830
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ VTL+GVL ACSH GL+ EGLH + M YGI+P +H +C++DLL R G + +A++
Sbjct: 831 DDVTLLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEV 890
Query: 561 INQMACDADIVVWKSLLAS 579
I+Q+ AD V+W + LA+
Sbjct: 891 IDQLPFRADGVIWATYLAA 909
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/447 (30%), Positives = 233/447 (52%), Gaps = 10/447 (2%)
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G P QF ++ ACS LG++ GRQ+H V+KS S + Q L+ MY K + DA
Sbjct: 152 GSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDA 211
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
R +F GIA D W SMIA + ++G +AL F+ M G+ P++ ++ S ++
Sbjct: 212 RRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSV-PDQVTCVTIISTLAS 270
Query: 251 F-----ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
AR L I +WNA+IA + +E L+ +M+ + L+P T S+
Sbjct: 271 MGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASI 330
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
L A +G Q+H+ +K G D+NV V ++++ +Y K + +A VF + +
Sbjct: 331 LSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVF-DFSTEKN 389
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
V WN+I+ +Q+ EE ++F M + ++ D TF V+GAC + SL++ Q+HC
Sbjct: 390 IVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHC 449
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
K G+ D+FV N ++D+Y K G++ A+ LF+ + D VSW++LI+G A E
Sbjct: 450 ITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGE 509
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
A+ + RM+ G++ + V+ + ACS++ +E G ++ +Y + S ++
Sbjct: 510 AINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHS-ASIKYNVCSNHAVGSSLI 568
Query: 546 DLLARAGCVHEAEDFINQMACDADIVV 572
DL ++ G V + + + DA +V
Sbjct: 569 DLYSKFGDVESSRKVLAHV--DASSIV 593
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 143/486 (29%), Positives = 244/486 (50%), Gaps = 17/486 (3%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A ++SACS L +L+ GR+VH +L S V Q +++MY KCG ++DAR FD +
Sbjct: 161 AVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIAC 220
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+ + WT+MIAG + + A+ L+ +M + G +P Q T +II + +G + R L
Sbjct: 221 PDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLGDARTL 280
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
+K + +A NA+IA Y++ + ++ + ++ + S A+
Sbjct: 281 ----LKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAAN 336
Query: 219 LEALCHFNEM----LHHGAYQPNEFIFGSVFS-----ACSNFARILFNEIDSPDLASWNA 269
+ A ++ + HG N F+ S+ + C + A+ +F+ ++ WNA
Sbjct: 337 MTAFDEGRQIHATAVKHG-LDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNA 395
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
++ G + E + +F MR +L D T S+L ACI +L G QVH IK G
Sbjct: 396 ILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNG 455
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE-ELFRL 388
D+++ V NA+L MY+K + A +F L DSVSWN++I L HN+ E E +
Sbjct: 456 MDADLFVANAMLDMYSKLGAIDVAKALF-SLIPVKDSVSWNALIVG-LAHNEEEGEAINM 513
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
RM I D ++F + AC+ + ++E Q+H K + + V + L+D+Y K
Sbjct: 514 LKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSK 573
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
G + S+RK+ ++ +V ++LI G Q DEA++LF ++ G P+ T +
Sbjct: 574 FGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSI 633
Query: 509 LTACSH 514
L+ C+
Sbjct: 634 LSGCTR 639
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 190/402 (47%), Gaps = 53/402 (13%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I + ++A I+ACS++ +++ G+++H + + + + ++++Y K G +E +R
Sbjct: 522 IALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSR 581
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ ++V A+I G QN +E++AI+L+ Q+L+ G P FTF SI+ C+
Sbjct: 582 KVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPV 641
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQN-----ALIAMYTKFDRILDARNVFSGIA-RKDVTS 204
S +G+Q+H + +KS ++ Q+ +L+ +Y K + DA + + K++
Sbjct: 642 SSVIGKQVHCYTLKSA----ILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVE 697
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------- 254
W + I+ +++ GY +++L F M + + +E F SV ACS A +
Sbjct: 698 WTATISGYAQNGYSVQSLVMFWRMRSYDV-RSDEATFTSVLKACSEMAALTDGKEIHGLI 756
Query: 255 ------------------------------LFNEI-DSPDLASWNALIAGVASHSNANEA 283
+F E+ + ++ WN++I G A + ANEA
Sbjct: 757 VKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEA 816
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILT 342
+ LF +M++ ++ PD +T+ +L AC + +G+ + ++ G V ++
Sbjct: 817 LLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLID 876
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
+ + L A V +L AD V W + +AAC H E
Sbjct: 877 LLGRGGHLQKAQEVIDQLPFRADGVIWATYLAACQMHKDEER 918
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 150/326 (46%), Gaps = 38/326 (11%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR +F+ I PD W ++IAG +A++LFS M +PD +T
Sbjct: 211 ARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVT---------- 260
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
C I++ A L +A + K + + +V+WN+
Sbjct: 261 -------------------------CVTIISTLASMGRLGDARTLLKRI-RMTSTVAWNA 294
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+IA+ Q E+F L+ M + P TF ++ A A M + + Q+H K G
Sbjct: 295 VIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHG 354
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
L +VFV + L+++Y+K G + A+K+F+F ++V W++++ G+ Q +E +++F
Sbjct: 355 LDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQ 414
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
MR + + T V VL AC ++ ++ G ++ I G+ + ++D+ ++
Sbjct: 415 YMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKN-GMDADLFVANAMLDMYSKL 473
Query: 552 GCVHEAEDFINQMACDADIVVWKSLL 577
G + A+ + + D V W +L+
Sbjct: 474 GAIDVAKALFSLIPVK-DSVSWNALI 498
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 133/293 (45%), Gaps = 37/293 (12%)
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE-LGKNADSVSWNSIIAACLQH 379
+H+ I+++G + +A++ +Y + + A G A S + +S+++ +
Sbjct: 75 LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHARS 134
Query: 380 NQAEELFRLFSRMLAS-QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
++ F R+ S PD V+ AC+++ +LE Q+HC + K+G VF
Sbjct: 135 GSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFC 194
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
GL+D+Y KCG + AR++F+ + PD + W+S+I GY + G +AL LF+RM +G
Sbjct: 195 QAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGS 254
Query: 499 SPNLVTLV-------------------------------GVLTACSHVGLVEEGLHLYRI 527
P+ VT V V+ + S GL E LY+
Sbjct: 255 VPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKD 314
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDF---INQMACDADIVVWKSLL 577
M+ + G++PTR + ++ A E + DA++ V SL+
Sbjct: 315 MKKQ-GLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLI 366
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 185/590 (31%), Positives = 305/590 (51%), Gaps = 49/590 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY+ + C RS +G VH+ + S Q D V N ++++Y KCG E A F M
Sbjct: 68 TYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLM 127
Query: 97 -PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
R+++SW+AM++ + N A+ ++ M+++G P ++ F + +ACS V +G
Sbjct: 128 GSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVG 187
Query: 156 RQLHAHVIKSEH-GSHLIAQNALIAMYTK-FDRILDARNVFSGIARKDVTSWGSMIAAFS 213
+ V+K+ + S + LI M+ K ++ A VF + ++ +W MI
Sbjct: 188 DSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLM 247
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------- 251
+ GY EA+ F EM+ G Y+P+ F V SAC+N
Sbjct: 248 QFGYAGEAIDLFLEMILSG-YEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDR 306
Query: 252 ---------------------ARILFNEIDSPDLASWNALIAGVASHSNANE-AMSLFSE 289
AR +F++I ++ SW A+I G +E A+ LF
Sbjct: 307 CVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRG 366
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M ++P+ T S L AC L G QV ++ +K+GF S V N++++MYA+
Sbjct: 367 MILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGR 426
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ +A F L + + +S+N++I A ++ +EE LF+ + + TF ++
Sbjct: 427 IDDARKAFDILFEK-NLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLS 485
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
A + ++ Q+H + K+GL + V N L+ +Y +CG++ SA ++F ME+ +V+S
Sbjct: 486 GAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVIS 545
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+S+I G+A+ G +AL+LF +M GV PNLVT + VL+ACSHVGLV EG ++ M
Sbjct: 546 WTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMY 605
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
E+G+IP EH +C+VD+L R+G + EA FIN M AD +VW++ L +
Sbjct: 606 TEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGA 655
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/513 (24%), Positives = 239/513 (46%), Gaps = 53/513 (10%)
Query: 114 NYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA 173
N + + AI M+ G P T+ +K C S +G +H + +S+ +
Sbjct: 44 NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103
Query: 174 QNALIAMYTKFDRILDARNVFSGI-ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
N+LI++Y+K + A ++F + + +D+ SW +M++ F+ AL F +M+ +G
Sbjct: 104 LNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163
Query: 233 AYQPNEFIFGSVFSACSN--FARI------------------------------------ 254
Y PNE+ F + ACS F +
Sbjct: 164 -YYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLV 222
Query: 255 ----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+F ++ + +W +I + A EA+ LF EM PD T+ ++ AC
Sbjct: 223 SAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACA 282
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV---LCNALLVFKELGKNADSV 367
L G Q+HS I+ G + V ++ MYAKCSV +C A +F ++ + +
Sbjct: 283 NMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI-LDHNVF 341
Query: 368 SWNSIIAACLQH-NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
SW ++I +Q EE LF M+ + + P+H TF+ + ACA +A+L + Q+ +
Sbjct: 342 SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTH 401
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
K G + V N L+ +Y + G + ARK F+ + +++S++++I YA+ +EA
Sbjct: 402 AVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEA 461
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVV 545
L+LF + G+ + T +L+ + +G + +G ++ R++++ G+ + C+ ++
Sbjct: 462 LELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKS--GLKLNQSVCNALI 519
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +R G + A M D +++ W S++
Sbjct: 520 SMYSRCGNIESAFQVFEDME-DRNVISWTSIIT 551
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 227/483 (46%), Gaps = 56/483 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC---GSLEDARMGF 93
T +G+ISAC+++ L LG+++H + D + ++NMY KC GS+ AR F
Sbjct: 273 TLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIF 332
Query: 94 DKMPQRNVVSWTAMIAGCSQN--YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
D++ NV SWTAMI G Q Y E +A+ L+ M+ + V+P FTF S +KAC+ L +
Sbjct: 333 DQILDHNVFSWTAMITGYVQKGGYDE-EALDLFRGMILTHVIPNHFTFSSTLKACANLAA 391
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ +G Q+ H +K S N+LI+MY + RI DAR F + K++ S+ ++I A
Sbjct: 392 LRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDA 451
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------------- 254
++K EAL FNE+ G + F F S+ S ++ I
Sbjct: 452 YAKNLNSEEALELFNEIEDQGM-GASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKL 510
Query: 255 -----------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
+F +++ ++ SW ++I G A H A +A+ LF +M
Sbjct: 511 NQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKML 570
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ + P+ +T ++L AC + +G + S + G + ++ + + L
Sbjct: 571 EEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSL 630
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD---HITFNDV 407
A+ + AD++ W + + AC H EL + ++M+ Q D +I +++
Sbjct: 631 SEAIQFINSMPYKADALVWRTFLGACRVHGNL-ELGKHAAKMIIEQEPHDPAAYILLSNL 689
Query: 408 MGACAK---MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
+ +K ++++ + I + G ++ V V N + Y+ S A ++++ ++N
Sbjct: 690 YASTSKWDEVSNIRKAMKEKNLIKEAGCSW-VEVENKVHKFYVGDTSHPKAAEIYDELQN 748
Query: 465 PDV 467
V
Sbjct: 749 LSV 751
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 193/588 (32%), Positives = 302/588 (51%), Gaps = 47/588 (7%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
I P T ++ C+ +SL+ G++V + I + D L + + MY CG L++A
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FD++ + W ++ +++ + +I L+ +M+ SGV +TF + K+ S L SV
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G QLH ++KS G N+L+A Y K R+ AR VF + +DV SW S+I +
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------- 251
G + L F +ML G + + SVF+ C++
Sbjct: 272 VSNGLAEKGLSVFVQMLVSG-IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 252 -------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
A+ +F E+ + S+ ++IAG A A EA+ LF EM +
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK--MGFDSNVPVCNAILTMYAKCSVL 350
+ PD TV ++L C L +G +VH +I + +GFD + V NA++ MYAKC +
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD--IFVSNALMDMYAKCGSM 448
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ-IKPDHITFNDVMG 409
A LVF E+ + D +SWN+II ++ A E LF+ +L + PD T V+
Sbjct: 449 QEAELVFSEM-RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
ACA +++ + ++H YI + G D V N L+D+Y KCG+L A LF+ + + D+VS
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 567
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+ +I GY G G EA+ LF +MR G+ + ++ V +L ACSH GLV+EG + IM
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+E I PT EH +C+VD+LAR G + +A FI M D +W +LL
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALL 675
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 209/446 (46%), Gaps = 44/446 (9%)
Query: 29 TNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
+ I I +T + + C+ R + LGR VH + + + N +L+MY KCG L+
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDS 349
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A+ F +M R+VVS+T+MIAG ++ +A+KL+ +M + G+ P +T +++ C+
Sbjct: 350 AKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR 409
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+ G+++H + +++ G + NAL+ MY K + +A VFS + KD+ SW ++
Sbjct: 410 YRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTI 469
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------ 250
I +SK Y EAL FN +L + P+E V AC++
Sbjct: 470 IGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 529
Query: 251 ----------------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
A +LF++I S DL SW +IAG H EA++LF+
Sbjct: 530 YFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFN 589
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAILTMYAKC 347
+MR + D ++ SLL AC + +G + + + + + V I+ M A+
Sbjct: 590 QMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLART 649
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
L A + + D+ W +++ C H+ + ++ ++ +++P++ + +
Sbjct: 650 GDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVF--ELEPENTGYYVL 707
Query: 408 MGAC-AKMASLEMVTQLHCYITKTGL 432
M A+ E V +L I + GL
Sbjct: 708 MANIYAEAEKWEQVKRLRKRIGQRGL 733
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 160/317 (50%), Gaps = 20/317 (6%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILL 63
++ ++ L EA+ ++ + I P Y +++ C+ R L G++VH+ I
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEG---ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
+ D+ + N +++MY KCGS+++A + F +M ++++SW +I G S+N N+A+ L
Sbjct: 426 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSL 485
Query: 124 YIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ +L+ P + T ++ AC+ L + GR++H +++++ + S N+L+ MY
Sbjct: 486 FNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 545
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K +L A +F IA KD+ SW MIA + G+ EA+ FN+M G + +E F
Sbjct: 546 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG-IEADEISFV 604
Query: 243 SVFSACSN---------FARILFNEID-SPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
S+ ACS+ F I+ +E P + + ++ +A + +A M
Sbjct: 605 SLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM-- 662
Query: 293 RELLPDGLTVHSLLCAC 309
+ PD +LLC C
Sbjct: 663 -PIPPDATIWGALLCGC 678
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 81/153 (52%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + K NEAL ++ T A ++ AC+SL + GR++H +I+
Sbjct: 467 NTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIM 526
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D + N +++MY KCG+L A M FD + +++VSWT MIAG + +AI
Sbjct: 527 RNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIA 586
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
L+ QM Q+G+ + +F S++ ACS G V G
Sbjct: 587 LFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 745
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 184/610 (30%), Positives = 306/610 (50%), Gaps = 76/610 (12%)
Query: 45 CSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSW 104
C RS++ + +H HI+ S + + N+++++Y KC S+ DAR FD+MP RN+VSW
Sbjct: 13 CIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSW 72
Query: 105 TAMIAGCSQNYQENDAIKLYIQMLQSGV-MPGQFTFGSIIKACSGLGSVCLGRQLHAHVI 163
T M++ + + ++A+ LY +M++S + P QF + +++KAC + +V LG+ +H H+
Sbjct: 73 TTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIF 132
Query: 164 KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALC 223
+++ ++ NAL+ MY K + DA+ VF I K+ TSW ++I ++K G +A+
Sbjct: 133 QAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMK 192
Query: 224 HFNEM-----------------------------LHHGAYQPNEFIFGSVFSAC------ 248
F++M +H + +EF F SV AC
Sbjct: 193 LFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDEL 252
Query: 249 ---------------------------------------SNFARILFNEIDSPDLASWNA 269
F + N S LA WN+
Sbjct: 253 MLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNS 312
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
+++G + + EA+S+ S M + D T +L C+ L QVH ++I G
Sbjct: 313 MLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSG 372
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
++ + V + ++ +YAK + NAL +F+ L + D V+W+S+I C + + F LF
Sbjct: 373 YELDCVVGSILIDIYAKQGSINNALRLFERL-PDKDVVAWSSLITGCARFGSDKLAFSLF 431
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
M+ ++ DH + V+ AC+ +AS + Q+H K G + V L+D+Y KC
Sbjct: 432 MDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKC 491
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
G + A LF + D +SW+S+I+G AQ G +EA+ L +M G PN +T++GVL
Sbjct: 492 GDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVL 551
Query: 510 TACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
TAC H GLVEE ++ +E +G+IP EH +C+VD+L +AG EA I++M D
Sbjct: 552 TACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPD 611
Query: 570 IVVWKSLLAS 579
+W SLL +
Sbjct: 612 KTIWSSLLGA 621
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 247/547 (45%), Gaps = 81/547 (14%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VS L ++ +EAL Y+ + + Y+ ++ AC +R+++LG+ VH HI +K
Sbjct: 76 VSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAK 135
Query: 66 CQPDVVLQNHILNMYGKCGSLEDAR------------------MG-------------FD 94
D+VL N +L+MY KCGSL DA+ +G FD
Sbjct: 136 LDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFD 195
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
KMP+ ++VSW ++IAG N + A++ M G+ +FTF S++KAC + L
Sbjct: 196 KMPEPDIVSWNSIIAGLVDN-ASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELML 254
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS-----WGSMI 209
GR++H ++IKS S +ALI MY+ + +A +F R S W SM+
Sbjct: 255 GREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSML 314
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------------- 254
+ G +EAL + M H + + + F V C NF +
Sbjct: 315 SGHVVNGDYVEALSMISHM-HRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGY 373
Query: 255 -------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
LF + D+ +W++LI G A + A SLF +
Sbjct: 374 ELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMD 433
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M L D + +L AC + G QVHS +K G++S V A++ MYAKC
Sbjct: 434 MIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGD 493
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ +AL +F L + D++SW SII C Q+ +AEE L +M+ S KP+ IT V+
Sbjct: 494 IEDALSLFGCLSE-IDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLT 552
Query: 410 ACAKMASLEMVTQLHCYI-TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDV 467
AC +E + I T GL N ++DI + G A KL + M PD
Sbjct: 553 ACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDK 612
Query: 468 VSWSSLI 474
WSSL+
Sbjct: 613 TIWSSLL 619
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 160/316 (50%), Gaps = 25/316 (7%)
Query: 4 DYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILL 63
DYV +L + + + V +DF T++ ++ C + +L L +VH ++
Sbjct: 322 DYVEALSMISHMHRSGVRFDFY-----------TFSIVLKICMNFDNLSLASQVHGFVIT 370
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
S + D V+ + ++++Y K GS+ +A F+++P ++VV+W+++I GC++ + A L
Sbjct: 371 SGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSL 430
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
++ M+ G+ F ++KACS L S G+Q+H+ +K + S + ALI MY K
Sbjct: 431 FMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAK 490
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
I DA ++F ++ D SW S+I ++ G EA+ ++M+ G +PN+
Sbjct: 491 CGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGT-KPNKITILG 549
Query: 244 VFSACSNFARI-----LFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
V +AC + + +FN I++ P +N ++ + EA+ L SEM +
Sbjct: 550 VLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFK 609
Query: 294 ELLPDGLTVHSLLCAC 309
PD SLL AC
Sbjct: 610 ---PDKTIWSSLLGAC 622
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 116/510 (22%), Positives = 217/510 (42%), Gaps = 68/510 (13%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+++ T+ ++ AC L LGR++H +I+ S + + +++MY C L +A
Sbjct: 232 LKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEAT 291
Query: 91 MGFDKMPQRNVVS-----WTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
FD+ + + VS W +M++G N +A+ + M +SGV +TF ++K
Sbjct: 292 KIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKI 351
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
C ++ L Q+H VI S + + + LI +Y K I +A +F + KDV +W
Sbjct: 352 CMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAW 411
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR------------ 253
S+I ++ G + A F +M+H G Q + F+ V ACS+ A
Sbjct: 412 SSLITGCARFGSDKLAFSLFMDMIHLG-LQIDHFVISIVLKACSSLASHQHGKQVHSLCL 470
Query: 254 ----------------------------ILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
LF + D SW ++I G A + A EA+S
Sbjct: 471 KKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAIS 530
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN---VPVC---NA 339
L +M + P+ +T+ +L AC + G+ ++ + ++N +P N
Sbjct: 531 LLHKMIESGTKPNKITILGVLTAC-----RHSGLVEEAWDVFNSIETNHGLIPCPEHYNC 585
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
++ + + A+ + E+ D W+S++ AC + + +L + + L +
Sbjct: 586 MVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTY-KNRDLANIVAEHLLATSPE 644
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTG----------LAFDVFVMNGLMDIYIKC 449
D + + A + + V+++ + K G + F + M L + K
Sbjct: 645 DVSVYIMLSNVYAALGMWDSVSKVRETVKKIGKKRAGKIFYEIPFKFYFMEHLHLGHAKQ 704
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
G G K+ + PD+VSW+++I G A
Sbjct: 705 GLNGGVVKVIYPILEPDLVSWNNVIAGLAD 734
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 193/606 (31%), Positives = 306/606 (50%), Gaps = 47/606 (7%)
Query: 14 LYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQ 73
+ EA+ Y +I + ++ ACS L +G KVH ++ + D V++
Sbjct: 79 FFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVE 138
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
+L MYG+ L+DA FD MP R+VV+W++++ QN Q ++ + ++ QM+ V
Sbjct: 139 TSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVE 198
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P T S+ +ACS LGS+ LGR +H +V++ E S+ N+LI MY K + A +
Sbjct: 199 PDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERL 258
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR 253
F + + W MI+ +++ G EAL F +M +PN+ V AC+ R
Sbjct: 259 FENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKM-QEFKMEPNQVTMVGVLCACARLGR 317
Query: 254 I-----------------------------------------LFNEIDSPDLASWNALIA 272
+ +F I + SWN LI+
Sbjct: 318 VKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLIS 377
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMGFD 331
+ EA+ LF +M+ + L+PD ++ S L AC G ++ Q G Q+H YIIK G +
Sbjct: 378 IFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSAC-GTISFSQLGAQIHGYIIKTG-N 435
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
N V NA++ MYAKC + +A +F+++ K V+WNS+I Q+ + E LF +
Sbjct: 436 FNDFVQNALIDMYAKCGFVHSANKMFEKI-KEKSLVTWNSMICGFSQNGYSVEAITLFDQ 494
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M + +K D +TF V+ AC+ + LE +H + GL D ++ L D+Y KCG
Sbjct: 495 MYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGE 554
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
L A +F+ M +VSWS +I GY G + + LF +M G+ PN +T + +L+A
Sbjct: 555 LQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSA 614
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
CSH G VEEG LY +E+G+ P +H +C+VDLL+RAG ++ A I + A+
Sbjct: 615 CSHAGAVEEG-KLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSS 673
Query: 572 VWKSLL 577
+W +LL
Sbjct: 674 IWGALL 679
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 155/585 (26%), Positives = 277/585 (47%), Gaps = 54/585 (9%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y L C++ +L ++H H+ ++ ++ Y + G E ++ FD P
Sbjct: 4 YMPLFRRCATSTTLT---QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFP 60
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ + W +I +A+ LY +M+ Q F F S++KACSG G + +G
Sbjct: 61 KPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGG 120
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H VIK S + + +L+ MY + + DA F + +DV +W S++ F + G
Sbjct: 121 KVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNG 180
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
E L F++M+ A +P+ SV ACS
Sbjct: 181 QASEGLDMFSQMISE-AVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLN 239
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A LF + A W +I+ EA+++F++M++ ++
Sbjct: 240 NSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKME 299
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN-AILTMYAKCSVLCNALL 355
P+ +T+ +LCAC + +G VH ++I+ D + A++ +YA L +
Sbjct: 300 PNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHK 359
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF+ + K +SWN++I+ ++ Q EE LF +M + PD + + AC ++
Sbjct: 360 VFETI-KEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTIS 418
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
++ Q+H YI KTG F+ FV N L+D+Y KCG + SA K+F ++ +V+W+S+I
Sbjct: 419 FSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMIC 477
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYG 533
G++Q G EA+ LF +M V + +T + V+ ACSH+G +E+G +H IM YG
Sbjct: 478 GFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIM---YG 534
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ + + D+ ++ G + A ++M+ + IV W ++A
Sbjct: 535 LRKDSYLDTALTDMYSKCGELQMAHGVFDRMS-ERSIVSWSVMIA 578
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 222/480 (46%), Gaps = 41/480 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T + ACS L SL+LGR VH +++ + + + L N ++ MYGK G L A F+ +
Sbjct: 203 TMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENV 262
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P R WT MI+ +Q+ +A+ ++ +M + + P Q T ++ AC+ LG V GR
Sbjct: 263 PCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGR 322
Query: 157 QLHAHVIKSEHGSHL-IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+H VI+ L AL+ +Y + D VF I K + SW ++I+ F++
Sbjct: 323 SVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRN 382
Query: 216 GYELEALCHFNEMLHHGAYQP---------------------------------NEFIFG 242
G EAL F +M G N+F+
Sbjct: 383 GQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQN 442
Query: 243 SV---FSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
++ ++ C + A +F +I L +WN++I G + + + EA++LF +M +
Sbjct: 443 ALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKM 502
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D LT S++ AC L +G VH +I G + + A+ MY+KC L A VF
Sbjct: 503 DKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVF 562
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+ + + VSW+ +IA H Q LF++ML S IKP+ ITF ++ AC+ ++
Sbjct: 563 DRMSERS-IVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAV 621
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS-WSSLILG 476
E +++ G+ ++D+ + G L A ++ + P S W +L+ G
Sbjct: 622 EEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNG 681
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 189/412 (45%), Gaps = 48/412 (11%)
Query: 15 YNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV-V 71
+ EAL + Q ++ P+ T G++ AC+ L ++ GR VH ++ P++
Sbjct: 283 FQEALNVFAKMQE---FKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDF 339
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
L ++ +Y G+L D F+ + ++ ++SW +I+ ++N Q +A+ L++QM G
Sbjct: 340 LGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQG 399
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
+MP ++ S + AC + LG Q+H ++IK+ + + + QNALI MY K + A
Sbjct: 400 LMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFV-QNALIDMYAKCGFVHSAN 458
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF 251
+F I K + +W SMI FS+ GY +EA+ F++M + + ++ F SV ACS+
Sbjct: 459 KMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQM-YMNCVKMDKLTFLSVIQACSHL 517
Query: 252 ARI----------------------------------------LFNEIDSPDLASWNALI 271
+ +F+ + + SW+ +I
Sbjct: 518 GYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMI 577
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
AG H N +SLF++M + P+ +T +L AC + +G + + + G +
Sbjct: 578 AGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVE 637
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
++ + ++ L A + L A+S W +++ C H + +
Sbjct: 638 PKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRID 689
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 84/146 (57%), Gaps = 2/146 (1%)
Query: 12 QNLYN-EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
QN Y+ EA+ +D N +++ T+ +I ACS L L+ G+ VH +++ + D
Sbjct: 481 QNGYSVEAITLFDQMYMNC-VKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDS 539
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
L + +MY KCG L+ A FD+M +R++VSW+ MIAG + Q N I L+ QML S
Sbjct: 540 YLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGS 599
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGR 156
G+ P TF I+ ACS G+V G+
Sbjct: 600 GIKPNDITFMHILSACSHAGAVEEGK 625
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 192/582 (32%), Positives = 293/582 (50%), Gaps = 42/582 (7%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y L+ +C G+ +H I+ D+ N +LN Y K SL DA FD+MP
Sbjct: 47 YGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMP 106
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
RN VS+ +I G SQ + ++AI L+ ++ G F F +++K LG
Sbjct: 107 DRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFS 166
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+HA V K S ALI Y+ AR VF I KD+ SW M+A + +
Sbjct: 167 VHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENEC 226
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------- 251
E+L F+ M G ++PN F F SV AC
Sbjct: 227 FEESLKLFSRMRIVG-FKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGV 285
Query: 252 --------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
A +F E+ D+ W+ +IA A + EA+ +F MR +LP
Sbjct: 286 ELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLP 345
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+ T+ SLL AC + L G Q+H +++K+G D NV V NA++ MYAKC + N+L +F
Sbjct: 346 NQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLF 405
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
E N VSWN++I +Q E+ LF ML Q++ +T++ V+ ACA +A+L
Sbjct: 406 SE-SPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAAL 464
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
E +Q+H KT + V N L+D+Y KCG++ AR +F+ + D VSW+++I GY
Sbjct: 465 EPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGY 524
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
+ G EALK F M P+ VT VG+L+ACS+ GL++ G ++ M EY I P
Sbjct: 525 SVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPC 584
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH +C+V LL R+G + +A ++++ + ++VW++LL++
Sbjct: 585 AEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSA 626
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 238/486 (48%), Gaps = 52/486 (10%)
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG 196
+ +GS++++C G G+ LH +IK + L A N L+ Y K+D + DA +F
Sbjct: 45 YIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDE 104
Query: 197 IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV------------ 244
+ ++ S+ ++I +S+ EA+ F+ + G ++ N F+F +V
Sbjct: 105 MPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEG-HELNPFVFSTVLKLLVSAEWAKL 163
Query: 245 --------------------------FSAC--SNFARILFNEIDSPDLASWNALIAGVAS 276
+S C + AR +F+ I+ D+ SW ++A
Sbjct: 164 GFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVE 223
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
+ E++ LFS MR P+ T S+L AC+G G VH K + + V
Sbjct: 224 NECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFV 283
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
++ +Y K + +AL VF+E+ K+ D + W+ +IA Q Q+EE +F RM
Sbjct: 284 GVELIDLYIKSGDVDDALQVFEEMPKD-DVIPWSFMIARYAQSEQSEEAIEMFCRMRRGL 342
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
+ P+ T ++ ACA + L++ Q+HC++ K GL +VFV N LMD+Y KCG + ++
Sbjct: 343 VLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSL 402
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
+LF+ N VSW+++I+GY Q G G++AL LF M V VT VL AC+ +
Sbjct: 403 QLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIA 462
Query: 517 LVEEGLHLY----RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
+E G ++ + + ++ ++ + ++D+ A+ G + +A + M + D V
Sbjct: 463 ALEPGSQIHSLSVKTIYDKNTVVG-----NALIDMYAKCGNIKDAR-LVFDMLREHDQVS 516
Query: 573 WKSLLA 578
W ++++
Sbjct: 517 WNAMIS 522
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 196/427 (45%), Gaps = 42/427 (9%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+ P ++ ++ S +LG VH + D + +++ Y CG E AR
Sbjct: 142 ELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQ 201
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD + +++VSWT M+A +N +++KL+ +M G P FTF S++KAC GL
Sbjct: 202 VFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEV 261
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+G+ +H K+ + L LI +Y K + DA VF + + DV W MIA
Sbjct: 262 FNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIAR 321
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------------- 254
+++ EA+ F M G PN+F S+ AC++ +
Sbjct: 322 YAQSEQSEEAIEMFCRM-RRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDM 380
Query: 255 -----------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
LF+E + SWN +I G N +A+ LF +M
Sbjct: 381 NVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDML 440
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ ++ +T S+L AC G L G Q+HS +K +D N V NA++ MYAKC +
Sbjct: 441 ECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIK 500
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A LVF L + D VSWN++I+ H E + F ML ++ KPD +TF ++ AC
Sbjct: 501 DARLVFDML-REHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSAC 559
Query: 412 AKMASLE 418
+ L+
Sbjct: 560 SNAGLLD 566
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 193/408 (47%), Gaps = 50/408 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+A ++ AC L +G+ VH + ++ + ++++Y K G ++DA F++M
Sbjct: 248 TFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEM 307
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+ +V+ W+ MIA +Q+ Q +AI+++ +M + V+P QFT S+++AC+ L + LG
Sbjct: 308 PKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGN 367
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H HV+K ++ NAL+ MY K R+ ++ +FS SW ++I + + G
Sbjct: 368 QIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAG 427
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+AL F +ML Q E + SV AC+
Sbjct: 428 NGEKALILFKDML-ECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVG 486
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR++F+ + D SWNA+I+G + H EA+ F M + E
Sbjct: 487 NALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECK 546
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC----NAILTMYAKCSVLCN 352
PD +T +L AC L +G +Y M + ++ C ++ + + L
Sbjct: 547 PDKVTFVGILSACSNAGLLDRG---QAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDK 603
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
A + E+ + W ++++AC+ HN EL R+ ++ + +I+P+
Sbjct: 604 AAKLVHEIPFEPSVMVWRALLSACVIHNDV-ELGRISAQRVL-EIEPE 649
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 387 RLFSRMLASQIKPDHITF--NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
R F S P+ T+ ++ +C + LHC I K G D+F N L++
Sbjct: 28 RSFLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLN 87
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
Y+K SL A KLF+ M + + VS+ +LI GY+Q EA+ LF+R++ G N
Sbjct: 88 FYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFV 147
Query: 505 LVGVL 509
VL
Sbjct: 148 FSTVL 152
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 194/611 (31%), Positives = 305/611 (49%), Gaps = 53/611 (8%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL---LSKCQPDVV 71
Y EA++ N+R T L+ AC L+LGR VH + L + P V
Sbjct: 135 YEEAMLLVR-EMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVA 193
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
++ Y + + + FD M RN+VSW AMI+G A++L++QML
Sbjct: 194 --TALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDE 250
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
V T ++AC+ LGS+ LG+Q+H IK E L NAL+ MY+ + +
Sbjct: 251 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSH 310
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF 251
+F + +D W SMI+A++ G EA+ F M G + +E + S C
Sbjct: 311 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGV-KKDERTVVIMLSMCEEL 369
Query: 252 A------------------RI-----------------------LFNEIDSPDLASWNAL 270
A RI +F+ + D+ SWN +
Sbjct: 370 ASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTM 429
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I +A ++ +A LF MR+ E+ P+ T+ S+L AC L G +H Y++K
Sbjct: 430 ILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSI 489
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+ N P+ A+ MY C A +F E + D +SWN++IA+ +++NQA + LF
Sbjct: 490 EINQPLRTALADMYMNCGDEATARDLF-EGCPDRDLISWNAMIASYVKNNQAHKALLLFH 548
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG--LAFDVFVMNGLMDIYIK 448
RM+ S+ +P+ +T +V+ + +A+L LH Y+T+ G L D+ + N + +Y +
Sbjct: 549 RMI-SEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYAR 607
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
CGSL SA +F + +++SW+++I GY G G +A+ F++M G PN VT V V
Sbjct: 608 CGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSV 667
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
L+ACSH G +E GL L+ M ++ + P H SC+VDLLAR GC+ EA +FI+ M +
Sbjct: 668 LSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEP 727
Query: 569 DIVVWKSLLAS 579
D VW++LL+S
Sbjct: 728 DASVWRALLSS 738
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 160/616 (25%), Positives = 297/616 (48%), Gaps = 57/616 (9%)
Query: 11 KQNLYNEALVAYDFSQNNTNIRIRP--STYAGLISACSSLRSLQLGRKVHDHILLSKCQP 68
+ NL N+ + ++Q + + + P +T ++ AC++ +++ G+ +H I +
Sbjct: 28 QANLKNDQAILSAYTQMES-LGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMD 86
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
DV + +++ Y KCG +EDAR FD M R+VV W AM+ G +A+ L +M
Sbjct: 87 DVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMG 146
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS---EHGSHLIAQNALIAMYTKFD 185
+ + P T +++ AC G + LGR +H + +++ + H+ ALI Y +FD
Sbjct: 147 RENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHV--ATALIGFYLRFD 204
Query: 186 -RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML--------------- 229
R+L +F + +++ SW +MI+ + +G +AL F +ML
Sbjct: 205 MRVLPL--LFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAV 262
Query: 230 ---------------HHGA----YQPNEFIFGSVFSACSNFARI-----LFNEIDSPDLA 265
H A + + +I ++ + SN + LF + + D
Sbjct: 263 QACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAP 322
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT-LYQGMQVHSY 324
WN++I+ A+ EAM LF M+ + D TV +L C + L +G +H++
Sbjct: 323 LWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAH 382
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
+IK G + + NA+L+MY + + + + +F + K D +SWN++I A ++ +
Sbjct: 383 VIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRM-KGVDIISWNTMILALARNTLRAQ 441
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
LF RM S+IKP+ T ++ AC + L+ +H Y+ K + + + L D
Sbjct: 442 ACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALAD 501
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y+ CG +AR LF + D++SW+++I Y + +AL LF RM S PN VT
Sbjct: 502 MYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMIS-EAEPNSVT 560
Query: 505 LVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
++ VL++ +H+ + +G LH Y + + + + + + AR G + AE+
Sbjct: 561 IINVLSSFTHLATLPQGQSLHAY-VTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFK 619
Query: 563 QMACDADIVVWKSLLA 578
+ +I+ W +++A
Sbjct: 620 TLP-KRNIISWNAMIA 634
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 240/500 (48%), Gaps = 48/500 (9%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+ AC+ L SL+LG+++H + + D+ + N +LNMY GSLE + F+ +P R+
Sbjct: 262 VQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDA 321
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL-GRQLHA 160
W +MI+ + +A+ L+I+M GV + T ++ C L S L G+ LHA
Sbjct: 322 PLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHA 381
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
HVIKS NAL++MYT+ + + + +F + D+ SW +MI A ++ +
Sbjct: 382 HVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQ 441
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------------- 251
A C E + +PN + S+ +AC +
Sbjct: 442 A-CELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALA 500
Query: 252 -----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
AR LF DL SWNA+IA ++ A++A+ LF M E P+ +
Sbjct: 501 DMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMIS-EAEPNSV 559
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFD--SNVPVCNAILTMYAKCSVLCNALLVFK 358
T+ ++L + TL QG +H+Y+ + GF ++ + NA +TMYA+C L +A +FK
Sbjct: 560 TIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFK 619
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
L K + +SWN++IA + + + FS+ML +P+ +TF V+ AC+ +E
Sbjct: 620 TLPKR-NIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIE 678
Query: 419 MVTQL-HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILG 476
M QL H + + ++ + ++D+ + G + AR+ + M PD W +L+
Sbjct: 679 MGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSS 738
Query: 477 YAQFGCGDEALKLFTRMRSL 496
+ +A +F ++ L
Sbjct: 739 CRAYSDAKQAKTIFEKLDKL 758
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 217/487 (44%), Gaps = 72/487 (14%)
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
K+ ++ W ++I + + + Y QM GV+P T ++KAC+ +V
Sbjct: 12 KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 71
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+ +H +S G+ L+ DV +++ + K
Sbjct: 72 GKSIH----RSIQGTDLM---------------------------DDVRVGTAVVDFYCK 100
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGV 274
G+ +A C F+ M D+ WNA++ G
Sbjct: 101 CGFVEDARCVFDAM-------------------------------SDRDVVLWNAMVYGY 129
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG-FDSN 333
EAM L EM L P+ T+ +LL AC G L G VH Y ++ G FDSN
Sbjct: 130 VGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSN 189
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
V A++ Y + + LL + +N VSWN++I+ + LF +ML
Sbjct: 190 PHVATALIGFYLRFDMRVLPLLFDLMVVRNI--VSWNAMISGYYDVGDYFKALELFVQML 247
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
++K D +T + ACA++ SL++ Q+H K D++++N L+++Y GSL
Sbjct: 248 VDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLE 307
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
S+ +LF + N D W+S+I YA FGC +EA+ LF RM+S GV + T+V +L+ C
Sbjct: 308 SSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCE 367
Query: 514 HV--GLVE-EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
+ GL++ + LH + I + G+ + ++ + CV + ++M DI
Sbjct: 368 ELASGLLKGKSLHAHVI---KSGMRIDASLGNALLSMYTELNCVESVQKIFDRMK-GVDI 423
Query: 571 VVWKSLL 577
+ W +++
Sbjct: 424 ISWNTMI 430
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 197/441 (44%), Gaps = 49/441 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRS-LQLGRKVHDHI 61
N +S+ + EA+ + + ++ T ++S C L S L G+ +H H+
Sbjct: 325 NSMISAYAAFGCHEEAMDLF-IRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHV 383
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ S + D L N +L+MY + +E + FD+M +++SW MI ++N A
Sbjct: 384 IKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQAC 443
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+L+ +M +S + P +T SI+ AC + + GR +H +V+K + + AL MY
Sbjct: 444 ELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMY 503
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
AR++F G +D+ SW +MIA++ K +AL F+ M+ +PN
Sbjct: 504 MNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISEA--EPNSVTI 561
Query: 242 GSVFSACSNFARI------------------------------------------LFNEI 259
+V S+ ++ A + +F +
Sbjct: 562 INVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTL 621
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
++ SWNA+IAG + ++AM FS+M + P+G+T S+L AC + G+
Sbjct: 622 PKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGL 681
Query: 320 QV-HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
Q+ HS + + + I+ + A+ + A + D+ W +++++C
Sbjct: 682 QLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRA 741
Query: 379 HNQAEELFRLFSRMLASQIKP 399
++ A++ +F ++ +++P
Sbjct: 742 YSDAKQAKTIFEKL--DKLEP 760
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 152/313 (48%), Gaps = 48/313 (15%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+P++Y +++AC + L GR +H +++ + + L+ + +MY CG AR
Sbjct: 454 IKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATAR 513
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F+ P R+++SW AMIA +N Q + A+ L+ +M+ S P T +++ + + L
Sbjct: 514 DLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMI-SEAEPNSVTIINVLSSFTHLA 572
Query: 151 SVCLGRQLHAHVIKS--EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
++ G+ LHA+V + G L NA I MY + + A N+F + ++++ SW +M
Sbjct: 573 TLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAM 632
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNE----- 258
IA + G +A+ F++ML G ++PN F SV SACS+ I LF+
Sbjct: 633 IAGYGMNGRGSDAMLAFSQMLEDG-FRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDF 691
Query: 259 ----------------------------IDS----PDLASWNALIAGVASHSNANEAMSL 286
IDS PD + W AL++ ++S+A +A ++
Sbjct: 692 NVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTI 751
Query: 287 FSEMRDRELLPDG 299
F ++ E + G
Sbjct: 752 FEKLDKLEPMNAG 764
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 132/273 (48%), Gaps = 5/273 (1%)
Query: 257 NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
+I D WN++I A+ N +S +++M +LP+ T+ +L AC + +
Sbjct: 11 TKIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVE 70
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+G +H I +V V A++ Y KC + +A VF + + D V WN+++
Sbjct: 71 RGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMS-DRDVVLWNAMVYGY 129
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD- 435
+ EE L M ++P+ T ++ AC + L + +H Y + G+ FD
Sbjct: 130 VGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGM-FDS 188
Query: 436 -VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
V L+ Y++ + LF+ M ++VSW+++I GY G +AL+LF +M
Sbjct: 189 NPHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQML 247
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
V + VT++ + AC+ +G ++ G ++++
Sbjct: 248 VDEVKFDCVTMLVAVQACAELGSLKLGKQIHQL 280
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 176/592 (29%), Positives = 298/592 (50%), Gaps = 70/592 (11%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED---A 89
+ P Y+ LI C S Q G+ +H ++ + PD L IL +Y + G L+D A
Sbjct: 69 VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYA 128
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R F++MP+RN+ +W MI ++ +A ++ +ML+ GV P FTF S ++ C L
Sbjct: 129 RKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGAL 188
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
S G+Q+H+ +I NALI MY K D VF + ++ +W S+I
Sbjct: 189 RSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSII 248
Query: 210 AAFSKLGYELEALCHFNEMLH-HGAYQPNEFIFGSVFSACSN------------------ 250
+A ++ G+ +AL F M QP++F F ++ + C+N
Sbjct: 249 SAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRAN 308
Query: 251 ----------------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
+A+ +FN + + SWN++I G + EA+ LF
Sbjct: 309 ITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFK 368
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+M+ + PD ++ S+L +C+ +G ++H++I++ + + ++ MYAKC
Sbjct: 369 QMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCG 428
Query: 349 VLCNALLVFKE-LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
+ A V+ + + K+ ++ WNSI+A +E F F ML S I+ D +T
Sbjct: 429 SMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLT---- 484
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
MVT ++ + +T L +D+Y KCG++ AR +F+ M ++
Sbjct: 485 -----------MVTIVNLLVLETAL----------VDMYSKCGAITKARTVFDNMNGKNI 523
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
VSW+++I GY++ GC EAL L+ M G+ PN VT + +L+ACSH GLVEEGL ++
Sbjct: 524 VSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTS 583
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M+ +Y I EH +C+VDLL RAG + +A++F+ +M + ++ W +LL +
Sbjct: 584 MQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGA 635
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 218/446 (48%), Gaps = 30/446 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAY-DFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
N +S+ + +N+ALV + ++ I+ T+ L++ C++ R+ GR++H H+
Sbjct: 245 NSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHL 304
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ + +++++ +++MY +CG L A+ F++M +RN SW +MI G QN + +A+
Sbjct: 305 IRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEAL 364
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+L+ QM +G+ P F+ S++ +C L GR+LH ++++ I Q L+ MY
Sbjct: 365 RLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMY 424
Query: 182 TKFDRILDARNVFSGIARKDVTS--WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN-- 237
K + A V+ +KD + W S++A ++ G + E+ HF EML
Sbjct: 425 AKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLT 484
Query: 238 ----------EFIFGSVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
E ++S C AR +F+ ++ ++ SWNA+I+G + H + EA+
Sbjct: 485 MVTIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALI 544
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV----CNAIL 341
L+ EM + + P+ +T ++L AC + +G+++ + M D N+ ++
Sbjct: 545 LYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFT---SMQEDYNIEAKAEHYTCMV 601
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE----ELFRLFSRMLASQI 397
+ + L +A +++ + +W +++ AC H + RLF L Q
Sbjct: 602 DLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFE--LDPQN 659
Query: 398 KPDHITFNDVMGACAKMASLEMVTQL 423
++ +++ A + +E + Q+
Sbjct: 660 PGPYVIMSNIYAAAGRWKEVEDIRQM 685
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 172/371 (46%), Gaps = 45/371 (12%)
Query: 221 ALCHFNEMLHHGAY-----QPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVA 275
+L HFN H+ + PN F + F + ++ FN DSP S + A
Sbjct: 12 SLNHFN--CHYSRHFFLLPNPNSKSFSAHFGHTTTTIKLKFNGPDSPKPTSIHTKPA--- 66
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
S+ N L SL+ CI + +G +H+ +I G++ +
Sbjct: 67 --SDVNP-----------------LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAY 107
Query: 336 VCNAILTMYAKCSV---LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
+ IL +YA+ LC A +F+E+ + + +WN++I A + + E + +F RM
Sbjct: 108 LMTKILMLYARSGCLDDLCYARKLFEEMPER-NLTAWNTMILAYARVDDYMEAWGIFDRM 166
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
L + PD+ TF + C + S + Q+H + G D FV N L+D+Y KC
Sbjct: 167 LKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDE 226
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL--GVSPNLVTLVGVLT 510
S K+F+ M + V+W+S+I AQFG ++AL LF RM+ G+ P+ T +LT
Sbjct: 227 ESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLT 286
Query: 511 ACSHVGLVEEG----LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
C++ +G HL R + I+ T +V + + G ++ A++ N+MA
Sbjct: 287 LCANQRNDNQGRQIHAHLIRANITKNIIVETE-----LVHMYSECGRLNYAKEIFNRMA- 340
Query: 567 DADIVVWKSLL 577
+ + W S++
Sbjct: 341 ERNAYSWNSMI 351
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 289/541 (53%), Gaps = 67/541 (12%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N IL+ Y K G LE+A F++MP+ + VSWTAMI G +Q Q +AI ++ +M+ V
Sbjct: 83 NIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVP 142
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P QFT +++ +C+ + + +GR++H+ V+K S++ N+L+ MY K + A+ V
Sbjct: 143 PTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIV 202
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR 253
F + K +SW +MI++ + S + A+
Sbjct: 203 FDRMKLKSTSSWNTMISSHMQ-------------------------------SGLVDLAQ 231
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGR 312
+ F ++ D+ SWNA+I+G H EA+ +FS+M D PD T+ S L AC
Sbjct: 232 VQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANL 291
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC------------SVLCN-------A 353
L G Q+H++II+ FD+ V NA+++MY+K S++ N A
Sbjct: 292 ENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTA 351
Query: 354 LL--------------VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
LL +F L + D V+W ++I +Q+ ++ LF M+ KP
Sbjct: 352 LLDGYVKLGDINPARRIFDSL-RVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKP 410
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
++ T ++ + +ASL+ Q+H T++G A V V N L+ +Y K GS+ AR +F
Sbjct: 411 NNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVF 470
Query: 460 NFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
N + D ++W+S+I+ AQ G G+EAL LF RM G+ P+ +T VGVL+AC+HVGLV
Sbjct: 471 NLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLV 530
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
E+G Y +M+N + IIPT H +C++DL RAG + EA FI M + D++ W SLLA
Sbjct: 531 EQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLA 590
Query: 579 S 579
S
Sbjct: 591 S 591
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 193/454 (42%), Gaps = 108/454 (23%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T ++++C+++ L +GRKVH ++ + + N +LNMY K G A++ FD+M
Sbjct: 147 TLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRM 206
Query: 97 P-------------------------------QRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+R+VVSW AMI+G +Q+ + +A+ ++
Sbjct: 207 KLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFS 266
Query: 126 QML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK- 183
+ML S P +FT S + AC+ L ++ LG+Q+HAH+I++E + NALI+MY+K
Sbjct: 267 KMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKS 326
Query: 184 ----------------------FDRILD----------ARNVFSGIARKDVTSWGSMIAA 211
F +LD AR +F + +DV +W +MI
Sbjct: 327 GGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVG 386
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF-------------------------- 245
+ + G+ +A+ F M+ G +PN + ++
Sbjct: 387 YVQNGFNQDAMELFRSMIKEGP-KPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNAS 445
Query: 246 --------------SACSNFARILFNEID-SPDLASWNALIAGVASHSNANEAMSLFSEM 290
S N AR +FN I D +W ++I +A H EA++LF M
Sbjct: 446 SVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERM 505
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA-ILTMYAKCSV 349
+ + PD +T +L AC + QG ++ + P A ++ ++ + +
Sbjct: 506 LENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGL 565
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A + + D ++W S++A+C H E
Sbjct: 566 LQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVE 599
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 140/282 (49%), Gaps = 35/282 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + EAL + +++ + T A +SAC++L +L+LG+++H HI+
Sbjct: 246 NAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHII 305
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLE---------------------------------DA 89
++ + N +++MY K G +E A
Sbjct: 306 RTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPA 365
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD + R+VV+WTAMI G QN DA++L+ M++ G P +T +++ S L
Sbjct: 366 RRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSL 425
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSM 208
S+ GRQ+HA +S + S + NALI MY K I DAR VF+ I ++D +W SM
Sbjct: 426 ASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSM 485
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
I A ++ G EAL F ML +G +P+ + V SAC++
Sbjct: 486 IIALAQHGLGEEALTLFERMLENG-IKPDHITYVGVLSACTH 526
>gi|115479139|ref|NP_001063163.1| Os09g0413300 [Oryza sativa Japonica Group]
gi|113631396|dbj|BAF25077.1| Os09g0413300 [Oryza sativa Japonica Group]
Length = 810
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 186/581 (32%), Positives = 300/581 (51%), Gaps = 42/581 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY+G +SAC++ L +GR VH +L + DV + ++NMY KCG + A F +M
Sbjct: 172 TYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRM 231
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P RNVVSWT IAG Q+ + A+ L +M+++GV ++T SI+ AC+ + V
Sbjct: 232 PVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREAS 291
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR-KDVTSWGSMIAAFSKL 215
Q+H V+K+E + + ALI+ YT F I + VF + + W + I+ S
Sbjct: 292 QIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGVSNH 351
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSA---------------------------- 247
L ++ M H G +PN+ + SVFS+
Sbjct: 352 SL-LRSVQLLRRMFHQG-LRPNDKCYASVFSSVNSIEFGGQLHSSAIKEGFIHGILVGSA 409
Query: 248 -------CSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
C N + +F E+ D SW A++AG A+H ++ EA F M PD
Sbjct: 410 LSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPD 469
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+++ ++L AC L +G +VH + +++ + + + ++MY+KC + A +F
Sbjct: 470 HVSLTAILSACNRPECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTARRIFD 528
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ D V W+S+I+ + EE LF M+A+ I+ D + ++ CA +A
Sbjct: 529 ATPRK-DQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPF 587
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
LH Y K G+ D V + L+ +Y + G++ +RK+F+ + PD+V+W+++I GYA
Sbjct: 588 YCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYA 647
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
Q G AL +F M LGV P+ V LV VL+ACS GLVE+G + + M YG+ P
Sbjct: 648 QHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPEL 707
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H C+VDLL R+G + EA+ F++ M D++VW +LLA+
Sbjct: 708 QHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAA 748
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 133/545 (24%), Positives = 253/545 (46%), Gaps = 54/545 (9%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
++++ K G L DA F + V W A ++G +N + A++++ M+ P
Sbjct: 110 MVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPN 169
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
FT+ + AC+ + +GR +H V++ + + +L+ MY K + A F
Sbjct: 170 SFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFW 229
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC------- 248
+ ++V SW + IA F + + A+ EM+ +G N++ S+ AC
Sbjct: 230 RMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGV-AINKYTATSILLACAQMSMVR 288
Query: 249 ----------------------------SNFARI-----LFNEIDS-PDLASWNALIAGV 274
+NF I +F E + + + W+A I+GV
Sbjct: 289 EASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGV 348
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
++HS ++ L M + L P+ S+ + ++ G Q+HS IK GF +
Sbjct: 349 SNHS-LLRSVQLLRRMFHQGLRPNDKCYASVFSSVN---SIEFGGQLHSSAIKEGFIHGI 404
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V +A+ TMY++C + ++ VF+E+ + D VSW +++A H + E F F M+
Sbjct: 405 LVGSALSTMYSRCDNVQDSYKVFEEM-QERDGVSWTAMVAGFATHGHSVEAFLTFRNMIL 463
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
KPDH++ ++ AC + L ++H + + F+ + + +Y KC + +
Sbjct: 464 DGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQT 522
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
AR++F+ D V WSS+I GYA GCG+EA+ LF M + + + +L+ C+
Sbjct: 523 ARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCAD 582
Query: 515 VG--LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
+ + LH Y I + GI+ + S +V + +R+G + ++ ++++ D+V
Sbjct: 583 IARPFYCKPLHGYAI---KAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISV-PDLVA 638
Query: 573 WKSLL 577
W +++
Sbjct: 639 WTTII 643
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/486 (23%), Positives = 219/486 (45%), Gaps = 48/486 (9%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ I T ++ AC+ + ++ ++H +L ++ D V++ +++ Y G +E +
Sbjct: 267 VAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSE 326
Query: 91 MGFDKMPQ-RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F++ N W+A I+G S N+ +++L +M G+ P + S+ S +
Sbjct: 327 KVFEEAGTVSNRSIWSAFISGVS-NHSLLRSVQLLRRMFHQGLRPNDKCYASVF---SSV 382
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
S+ G QLH+ IK ++ +AL MY++ D + D+ VF + +D SW +M+
Sbjct: 383 NSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMV 442
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------- 249
A F+ G+ +EA F M+ G ++P+ ++ SAC+
Sbjct: 443 AGFATHGHSVEAFLTFRNMILDG-FKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYG 501
Query: 250 -------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
AR +F+ D W+++I+G A++ EA+SLF M
Sbjct: 502 ETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLM 561
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ D S+L C + +H Y IK G S+ V ++++ +Y++ +
Sbjct: 562 VAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNM 621
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
++ VF E+ D V+W +II QH ++ +F M+ ++PD + V+ A
Sbjct: 622 DDSRKVFDEISV-PDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSA 680
Query: 411 CAKMASLEM-VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVV 468
C++ +E + T G+ ++ ++D+ + G L A+ + M PD++
Sbjct: 681 CSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLM 740
Query: 469 SWSSLI 474
WS+L+
Sbjct: 741 VWSTLL 746
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 171/379 (45%), Gaps = 43/379 (11%)
Query: 43 SACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVV 102
S SS+ S++ G ++H + +++ + + MY +C +++D+ F++M +R+ V
Sbjct: 377 SVFSSVNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGV 436
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
SWTAM+AG + + +A + M+ G P + +I+ AC+ + G+++H H
Sbjct: 437 SWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHT 496
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL 222
++ +G + I+MY+K + AR +F RKD W SMI+ ++ G EA+
Sbjct: 497 LRV-YGETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAI 555
Query: 223 CHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------------- 254
F M+ + + + +I S+ S C++ AR
Sbjct: 556 SLFQLMVA-ASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKV 614
Query: 255 ------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
+F+EI PDL +W +I G A H ++ A+++F M + PD + +
Sbjct: 615 YSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVL 674
Query: 303 HSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
S+L AC + QG +S G + + ++ + + L A +
Sbjct: 675 VSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMP 734
Query: 362 KNADSVSWNSIIAACLQHN 380
D + W++++AAC H+
Sbjct: 735 MKPDLMVWSTLLAACRVHD 753
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 112/226 (49%), Gaps = 7/226 (3%)
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
QV+ K G N VC ++ + AK L +AL VF + G + +V WN+ ++ +++
Sbjct: 90 QVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFAD-GDPSSAVCWNAAVSGAVRN 148
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+ +F M+ +P+ T++ + ACA L + +H + + +DVFV
Sbjct: 149 GEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVG 208
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
L+++Y KCG +G+A + F M +VVSW++ I G+ Q A+ L M GV+
Sbjct: 209 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 268
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
N T +L AC+ + +V E ++ + ++ T + CVV
Sbjct: 269 INKYTATSILLACAQMSMVREASQIHGM------VLKTEMYLDCVV 308
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 141/328 (42%), Gaps = 14/328 (4%)
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+F + D WNA ++G + A+ +F +M P+ T L AC
Sbjct: 126 VFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEE 185
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
L G VH +++ + +V V +++ MYAKC + A+ F + + VSW + IA
Sbjct: 186 LSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVR-NVVSWTTAIA 244
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
+Q ++ L M+ + + + T ++ ACA+M+ + +Q+H + KT +
Sbjct: 245 GFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYL 304
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS----WSSLILGYAQFGCGDEALKLF 490
D V L+ Y G + + K+F E VS WS+ I G + +++L
Sbjct: 305 DCVVKEALISTYTNFGFIELSEKVF---EEAGTVSNRSIWSAFISGVSNHSL-LRSVQLL 360
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
RM G+ PN V S V +E G L+ E G I S + + +R
Sbjct: 361 RRMFHQGLRPNDKCYASVF---SSVNSIEFGGQLHSSAIKE-GFIHGILVGSALSTMYSR 416
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLA 578
V ++ +M + D V W +++A
Sbjct: 417 CDNVQDSYKVFEEMQ-ERDGVSWTAMVA 443
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 118/249 (47%), Gaps = 16/249 (6%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
+IRI + ++S C+ + + +H + + + D + + ++ +Y + G+++D+
Sbjct: 565 SIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDS 624
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD++ ++V+WT +I G +Q+ +A+ ++ M+Q GV P S++ ACS
Sbjct: 625 RKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRN 684
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILDARNVFSGIARK-DVTSWG 206
G V G + + +++ +G Q+ ++ + + R+ +A+ + K D+ W
Sbjct: 685 GLVEQGFN-YFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWS 743
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-SNFARILFNEIDSPDLA 265
+++AA C ++ G + N+ G+ S + + IL N D ++A
Sbjct: 744 TLLAA-----------CRVHDDTVLGRFVENKIREGNYDSGSFATLSNILANSGDWEEVA 792
Query: 266 SWNALIAGV 274
+ GV
Sbjct: 793 RIRKTMKGV 801
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 12/185 (6%)
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
P + + + ACA+ + + Q++C K GL+ + +V G++D+ K G L A ++
Sbjct: 67 PSQFAYGNALAACARAPAPALAEQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRV 126
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS----- 513
F + V W++ + G + G G A+++F M PN T G L+AC+
Sbjct: 127 FADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEEL 186
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
VG GL L R + EY + + +V++ A+ G + A +M ++V W
Sbjct: 187 SVGRAVHGLVLRR--DPEYDVFVG----TSLVNMYAKCGDMGAAMREFWRMPVR-NVVSW 239
Query: 574 KSLLA 578
+ +A
Sbjct: 240 TTAIA 244
>gi|125605681|gb|EAZ44717.1| hypothetical protein OsJ_29347 [Oryza sativa Japonica Group]
Length = 701
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 186/581 (32%), Positives = 300/581 (51%), Gaps = 42/581 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY+G +SAC++ L +GR VH +L + DV + ++NMY KCG + A F +M
Sbjct: 63 TYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRM 122
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P RNVVSWT IAG Q+ + A+ L +M+++GV ++T SI+ AC+ + V
Sbjct: 123 PVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREAS 182
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR-KDVTSWGSMIAAFSKL 215
Q+H V+K+E + + ALI+ YT F I + VF + + W + I+ S
Sbjct: 183 QIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGVSNH 242
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSA---------------------------- 247
L ++ M H G +PN+ + SVFS+
Sbjct: 243 SL-LRSVQLLRRMFHQG-LRPNDKCYASVFSSVNSIEFGGQLHSSAIKEGFIHGILVGSA 300
Query: 248 -------CSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
C N + +F E+ D SW A++AG A+H ++ EA F M PD
Sbjct: 301 LSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPD 360
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+++ ++L AC L +G +VH + +++ + + + ++MY+KC + A +F
Sbjct: 361 HVSLTAILSACNRPECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTARRIFD 419
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ D V W+S+I+ + EE LF M+A+ I+ D + ++ CA +A
Sbjct: 420 ATPRK-DQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPF 478
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
LH Y K G+ D V + L+ +Y + G++ +RK+F+ + PD+V+W+++I GYA
Sbjct: 479 YCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYA 538
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
Q G AL +F M LGV P+ V LV VL+ACS GLVE+G + + M YG+ P
Sbjct: 539 QHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPEL 598
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H C+VDLL R+G + EA+ F++ M D++VW +LLA+
Sbjct: 599 QHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAA 639
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 133/545 (24%), Positives = 253/545 (46%), Gaps = 54/545 (9%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
++++ K G L DA F + V W A ++G +N + A++++ M+ P
Sbjct: 1 MVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPN 60
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
FT+ + AC+ + +GR +H V++ + + +L+ MY K + A F
Sbjct: 61 SFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFW 120
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC------- 248
+ ++V SW + IA F + + A+ EM+ +G N++ S+ AC
Sbjct: 121 RMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGV-AINKYTATSILLACAQMSMVR 179
Query: 249 ----------------------------SNFARI-----LFNEIDS-PDLASWNALIAGV 274
+NF I +F E + + + W+A I+GV
Sbjct: 180 EASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGV 239
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
++HS ++ L M + L P+ S+ + ++ G Q+HS IK GF +
Sbjct: 240 SNHS-LLRSVQLLRRMFHQGLRPNDKCYASVFSSVN---SIEFGGQLHSSAIKEGFIHGI 295
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V +A+ TMY++C + ++ VF+E+ + D VSW +++A H + E F F M+
Sbjct: 296 LVGSALSTMYSRCDNVQDSYKVFEEM-QERDGVSWTAMVAGFATHGHSVEAFLTFRNMIL 354
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
KPDH++ ++ AC + L ++H + + F+ + + +Y KC + +
Sbjct: 355 DGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQT 413
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
AR++F+ D V WSS+I GYA GCG+EA+ LF M + + + +L+ C+
Sbjct: 414 ARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCAD 473
Query: 515 VG--LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
+ + LH Y I + GI+ + S +V + +R+G + ++ ++++ D+V
Sbjct: 474 IARPFYCKPLHGYAI---KAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISV-PDLVA 529
Query: 573 WKSLL 577
W +++
Sbjct: 530 WTTII 534
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/486 (23%), Positives = 219/486 (45%), Gaps = 48/486 (9%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ I T ++ AC+ + ++ ++H +L ++ D V++ +++ Y G +E +
Sbjct: 158 VAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSE 217
Query: 91 MGFDKMPQ-RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F++ N W+A I+G S N+ +++L +M G+ P + S+ S +
Sbjct: 218 KVFEEAGTVSNRSIWSAFISGVS-NHSLLRSVQLLRRMFHQGLRPNDKCYASVF---SSV 273
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
S+ G QLH+ IK ++ +AL MY++ D + D+ VF + +D SW +M+
Sbjct: 274 NSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMV 333
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------- 249
A F+ G+ +EA F M+ G ++P+ ++ SAC+
Sbjct: 334 AGFATHGHSVEAFLTFRNMILDG-FKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYG 392
Query: 250 -------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
AR +F+ D W+++I+G A++ EA+SLF M
Sbjct: 393 ETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLM 452
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ D S+L C + +H Y IK G S+ V ++++ +Y++ +
Sbjct: 453 VAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNM 512
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
++ VF E+ D V+W +II QH ++ +F M+ ++PD + V+ A
Sbjct: 513 DDSRKVFDEISV-PDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSA 571
Query: 411 CAKMASLEM-VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVV 468
C++ +E + T G+ ++ ++D+ + G L A+ + M PD++
Sbjct: 572 CSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLM 631
Query: 469 SWSSLI 474
WS+L+
Sbjct: 632 VWSTLL 637
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 178/397 (44%), Gaps = 48/397 (12%)
Query: 43 SACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVV 102
S SS+ S++ G ++H + +++ + + MY +C +++D+ F++M +R+ V
Sbjct: 268 SVFSSVNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGV 327
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
SWTAM+AG + + +A + M+ G P + +I+ AC+ + G+++H H
Sbjct: 328 SWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHT 387
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL 222
++ +G + I+MY+K + AR +F RKD W SMI+ ++ G EA+
Sbjct: 388 LRV-YGETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAI 446
Query: 223 CHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------------- 254
F M+ + + + +I S+ S C++ AR
Sbjct: 447 SLFQLMVA-ASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKV 505
Query: 255 ------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
+F+EI PDL +W +I G A H ++ A+++F M + PD + +
Sbjct: 506 YSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVL 565
Query: 303 HSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
S+L AC + QG +S G + + ++ + + L A +
Sbjct: 566 VSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMP 625
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
D + W++++AAC H+ + R + ++I+
Sbjct: 626 MKPDLMVWSTLLAACRVHDDT-----VLGRFVENKIR 657
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 141/328 (42%), Gaps = 14/328 (4%)
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+F + D WNA ++G + A+ +F +M P+ T L AC
Sbjct: 17 VFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEE 76
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
L G VH +++ + +V V +++ MYAKC + A+ F + + VSW + IA
Sbjct: 77 LSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVR-NVVSWTTAIA 135
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
+Q ++ L M+ + + + T ++ ACA+M+ + +Q+H + KT +
Sbjct: 136 GFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYL 195
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS----WSSLILGYAQFGCGDEALKLF 490
D V L+ Y G + + K+F E VS WS+ I G + +++L
Sbjct: 196 DCVVKEALISTYTNFGFIELSEKVF---EEAGTVSNRSIWSAFISGVSNHSL-LRSVQLL 251
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
RM G+ PN V S V +E G L+ E G I S + + +R
Sbjct: 252 RRMFHQGLRPNDKCYASVF---SSVNSIEFGGQLHSSAIKE-GFIHGILVGSALSTMYSR 307
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLA 578
V ++ +M + D V W +++A
Sbjct: 308 CDNVQDSYKVFEEMQ-ERDGVSWTAMVA 334
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 118/249 (47%), Gaps = 16/249 (6%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
+IRI + ++S C+ + + +H + + + D + + ++ +Y + G+++D+
Sbjct: 456 SIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDS 515
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD++ ++V+WT +I G +Q+ +A+ ++ M+Q GV P S++ ACS
Sbjct: 516 RKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRN 575
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILDARNVFSGIARK-DVTSWG 206
G V G + + +++ +G Q+ ++ + + R+ +A+ + K D+ W
Sbjct: 576 GLVEQGFN-YFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWS 634
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-SNFARILFNEIDSPDLA 265
+++AA C ++ G + N+ G+ S + + IL N D ++A
Sbjct: 635 TLLAA-----------CRVHDDTVLGRFVENKIREGNYDSGSFATLSNILANSGDWEEVA 683
Query: 266 SWNALIAGV 274
+ GV
Sbjct: 684 RIRKTMKGV 692
>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
Length = 818
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 177/577 (30%), Positives = 291/577 (50%), Gaps = 42/577 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +I AC L S+ LGR VHD I + DV + + ++ Y + G + DAR FD+M
Sbjct: 149 TFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRM 208
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P ++ V W M+ G +N ++A ++++M ++ P TF ++ C+ + G
Sbjct: 209 PSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGS 268
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
QLH V+ S N L+AMY K + DAR +F + + D+ +W MI+ + + G
Sbjct: 269 QLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNG 328
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGS--------------------------------- 243
+ EA C F+EM+ G +P+ F S
Sbjct: 329 FMDEASCLFHEMISAGM-KPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLK 387
Query: 244 -----VFSACSN--FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
++ C + A +F++ D+ A+I+G + N A+ +F + +
Sbjct: 388 SALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMR 447
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
+ +T+ S+L AC G L G ++H +I+K G + V +AI+ MYAKC L A
Sbjct: 448 ANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQT 507
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + D+V WNS+I +C Q+ + EE LF +M + K D ++ + + ACA + +
Sbjct: 508 FIGISXK-DAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPA 566
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L ++H ++ + D+F + L+D+Y KCG+L A ++F+ ME + VSW+S+I
Sbjct: 567 LHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDMMEEKNEVSWNSIIAA 626
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y G ++L LF M G+ P+ VT + +++AC H G V+EG+H +R M E GI+
Sbjct: 627 YGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMA 686
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
EH +C+VDL RAG ++EA IN M D VW
Sbjct: 687 RMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVW 723
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 159/580 (27%), Positives = 267/580 (46%), Gaps = 46/580 (7%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++ C+ L GR+ H +L++ + +L +L MY CG+ DA+ F ++
Sbjct: 52 ILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
W MI G + Q + A+ Y +ML G +P ++TF +IKAC GL SV LGR +H
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+ + ++LI Y++ I DAR +F + KD W M+ + K G
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDN 231
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NF------------------------ 251
A F EM PN F V S C+ NF
Sbjct: 232 ATGVFMEM-RRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLL 290
Query: 252 -----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
AR LF+ + DL +WN +I+G + +EA LF EM + PD +
Sbjct: 291 AMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSI 350
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
T S L TL QG ++H YII+ G +V + +A++ +Y KC + A +F +
Sbjct: 351 TFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQR 410
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
D V ++I+ + + +F +L +++ + +T V+ ACA +A+L +
Sbjct: 411 -TPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLG 469
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
+LH +I K G +V + +MD+Y KCG L A + F + D V W+S+I +Q
Sbjct: 470 KELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGISXKDAVCWNSMITSCSQN 529
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
G +EA+ LF +M G + V++ L+AC+++ + G ++ M G +
Sbjct: 530 GKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMR--GAFRSDLF 587
Query: 541 C-SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
S ++D+ ++ G + A + M + + V W S++A+
Sbjct: 588 AESALIDMYSKCGNLDLACRVFDMME-EKNEVSWNSIIAA 626
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 140/484 (28%), Positives = 231/484 (47%), Gaps = 54/484 (11%)
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
SI++ C+ + GRQ HA ++ + G + I L+ MY LDA+N+F +
Sbjct: 51 SILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------- 251
W MI F+ +G AL + +ML G P+++ F V AC
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTL-PDKYTFPYVIKACGGLNSVALGRVV 169
Query: 252 -------------------------------ARILFNEIDSPDLASWNALIAGVASHSNA 280
AR LF+ + S D WN ++ G + +
Sbjct: 170 HDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDW 229
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
+ A +F EMR E P+ +T +L C + + G Q+H ++ G + + PV N +
Sbjct: 230 DNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTL 289
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
L MYAKC L +A +F + K D V+WN +I+ +Q+ +E LF M+++ +KPD
Sbjct: 290 LAMYAKCGHLFDARRLFDMMPK-TDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPD 348
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
ITF+ + ++ A+L ++HCYI + G++ DVF+ + L+DIY KC + A K+F+
Sbjct: 349 SITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFD 408
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
D+V +++I GY G + AL++F + + N VTL VL AC+ + +
Sbjct: 409 QRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTL 468
Query: 521 GLHLY-RIMENEYGIIPTREHC---SCVVDLLARAGCVHEA-EDFINQMACDADIVVWKS 575
G L+ I++N +G C S ++D+ A+ G + A + FI DA V W S
Sbjct: 469 GKELHGHILKNGHG-----GSCYVGSAIMDMYAKCGKLDLAHQTFIGISXKDA--VCWNS 521
Query: 576 LLAS 579
++ S
Sbjct: 522 MITS 525
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 124/224 (55%), Gaps = 1/224 (0%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+R T A ++ AC+ L +L LG+++H HIL + + + I++MY KCG L+ A
Sbjct: 446 MRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAH 505
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F + ++ V W +MI CSQN + +AI L+ QM +G + + + AC+ L
Sbjct: 506 QTFIGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLP 565
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G+++HA +++ S L A++ALI MY+K + A VF + K+ SW S+IA
Sbjct: 566 ALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDMMEEKNEVSWNSIIA 625
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
A+ G ++L F+ ML G QP+ F ++ SAC + ++
Sbjct: 626 AYGNHGRLKDSLNLFHGMLGDGI-QPDHVTFLAIISACGHAGQV 668
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 132/292 (45%), Gaps = 6/292 (2%)
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
FS D L P + S+L C L G Q H+ ++ G N + +L MY
Sbjct: 37 FSIHNDDSLAPQ---LVSILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVL 93
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
C +A +F +L + S WN +I Q + + +ML PD TF
Sbjct: 94 CGAFLDAKNIFYQL-RLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPY 152
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
V+ AC + S+ + +H I G DVFV + L+ Y + G + AR LF+ M + D
Sbjct: 153 VIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKD 212
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
V W+ ++ GY + G D A +F MR +PN VT VL+ C+ ++ G L+
Sbjct: 213 GVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHG 272
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++ + G+ + ++ + A+ G + +A + M D+V W +++
Sbjct: 273 LVVSS-GLEMDSPVANTLLAMYAKCGHLFDARRLFDMMP-KTDLVTWNGMIS 322
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 189/637 (29%), Positives = 327/637 (51%), Gaps = 68/637 (10%)
Query: 4 DYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHI 61
D + S + NL EA++ Y + + I+P YA L+ A + L+ ++LG+++H H+
Sbjct: 67 DLLRSKVRSNLLREAVLTY---VDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 62 LLSKCQPD-VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
D V + N ++N+Y KCG FD++ +RN VSW ++I+ + A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLG---SVCLGRQLHAHVI-KSEHGSHLIAQNA 176
++ + ML V P FT S++ ACS L + +G+Q+HA+ + K E S +I N
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NT 241
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
L+AMY K ++ ++ + +D+ +W +++++ + LEAL + EM+ G +P
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV-EP 300
Query: 237 NEFIFGSVFSACSNF-----------------------------------------ARIL 255
+EF SV ACS+ R +
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE-LLPDGLTVHSLLCACIGRLT 314
F+ + + WNA+IAG + + + EA+ LF M + LL + T+ ++ AC+
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
+ +H +++K G D + V N ++ MY++ + A+ +F ++ ++ D V+WN++I
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNTMIT 479
Query: 375 ACLQHNQAEELFRLFSRML---------ASQI--KPDHITFNDVMGACAKMASLEMVTQL 423
+ E+ L +M AS++ KP+ IT ++ +CA +++L ++
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H Y K LA DV V + L+D+Y KCG L +RK+F+ + +V++W+ +I+ Y G G
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
EA+ L M GV PN VT + V ACSH G+V+EGL ++ +M+ +YG+ P+ +H +C
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIV-VWKSLLAS 579
VVDLL RAG + EA +N M D + W SLL +
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 137/536 (25%), Positives = 244/536 (45%), Gaps = 72/536 (13%)
Query: 104 WTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI 163
W ++ ++ +A+ Y+ M+ G+ P + F +++KA + L + LG+Q+HAHV
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 164 KSEHG-SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA---AFSKLGYEL 219
K +G + N L+ +Y K VF I+ ++ SW S+I+ +F K L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 220 EAL-CHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------------- 251
EA C +E + +P+ F SV +ACSN
Sbjct: 185 EAFRCMLDENV-----EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII 239
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+++L DL +WN +++ + + EA+ EM +
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALL 355
PD T+ S+L AC L G ++H+Y +K G D N V +A++ MY C + +
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ-IKPDHITFNDVMGACAKM 414
VF + + WN++IA Q+ +E LF M S + + T V+ AC +
Sbjct: 360 VFDGMFDRKIGL-WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRS 418
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+ +H ++ K GL D FV N LMD+Y + G + A ++F ME+ D+V+W+++I
Sbjct: 419 GAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMI 478
Query: 475 LGYAQFGCGDEALKLFTRMRSL-----------GVSPNLVTLVGVLTACSHVGLVEEG-- 521
GY ++AL L +M++L + PN +TL+ +L +C+ + + +G
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+H Y I N + S +VD+ A+ GC+ + +Q+ +++ W ++
Sbjct: 539 IHAYAIKNNLATDVAV---GSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVII 590
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 251/531 (47%), Gaps = 63/531 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSL---RSLQLGRKVHD 59
N +SSLC + AL A+ + N+ T +++ACS+L L +G++VH
Sbjct: 168 NSLISSLCSFEKWEMALEAFR-CMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA 226
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
+ L K + + + N ++ MYGK G L +++ R++V+W +++ QN Q +
Sbjct: 227 YGL-RKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLE 285
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH-GSHLIAQNALI 178
A++ +M+ GV P +FT S++ ACS L + G++LHA+ +K+ + +AL+
Sbjct: 286 ALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALV 345
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM---------- 228
MY ++L R VF G+ + + W +MIA +S+ ++ EAL F M
Sbjct: 346 DMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANS 405
Query: 229 ----------LHHGAYQPNEFIFG---------------SVFSACSNFARI-----LFNE 258
+ GA+ E I G ++ S +I +F +
Sbjct: 406 TTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGK 465
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE-----------LLPDGLTVHSLLC 307
++ DL +WN +I G + +A+ L +M++ E L P+ +T+ ++L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
+C L +G ++H+Y IK ++V V +A++ MYAKC L + VF ++ + + +
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVI 584
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
+WN II A H +E L M+ +KP+ +TF V AC+ ++ ++ Y+
Sbjct: 585 TWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YV 643
Query: 428 TKT--GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP--DVVSWSSLI 474
K G+ ++D+ + G + A +L N M +WSSL+
Sbjct: 644 MKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 10/288 (3%)
Query: 244 VFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
V SA S I ++ SP+ W L+ + EA+ + +M + PD
Sbjct: 44 VASAVSGAPSIFISQSRSPEW--WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFP 101
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFD-SNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
+LL A + G Q+H+++ K G+ +V V N ++ +Y KC VF + +
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE 161
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE---M 419
+ VSWNS+I++ + E F ML ++P T V+ AC+ + E M
Sbjct: 162 R-NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMM 220
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
Q+H Y + G + F++N L+ +Y K G L S++ L D+V+W++++ Q
Sbjct: 221 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLY 525
EAL+ M GV P+ T+ VL ACSH+ ++ G LH Y
Sbjct: 280 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAY 327
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 15/219 (6%)
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
W ++ + ++ N E + M+ IKPD+ F ++ A A + +E+ Q+H ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 429 KTGLAFD-VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K G D V V N L+++Y KCG G+ K+F+ + + VSW+SLI F + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE-----EGLHLYRIMENEYG--IIPTREH 540
+ F M V P+ TLV V+TACS++ + E + +H Y + + E II T
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT--- 241
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+V + + G + ++ + D+V W ++L+S
Sbjct: 242 ---LVAMYGKLGKLASSKVLLGSFG-GRDLVTWNTVLSS 276
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 169/565 (29%), Positives = 298/565 (52%), Gaps = 44/565 (7%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR- 99
L+ C + L+ G+ +H I+ Q ++ L ++N+Y C + A++ F +
Sbjct: 9 LLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL 68
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGRQL 158
++ W ++A C++N+ + ++++ ++L + P FT+ S++KACSGLG V G+ +
Sbjct: 69 DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 128
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H HVIKS ++ ++ + MY K + DA +F + +DV SW ++I+ + + G
Sbjct: 129 HTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQP 188
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------------- 251
+AL F EM G ++P+ +V S+C+
Sbjct: 189 EKALELFEEMKVSG-FKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSA 247
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
A+ +F +I ++ SWN++IAG + ++ + LF M + + P
Sbjct: 248 LVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPT 307
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
T+ S+L AC + L G +H YII+ ++++ V ++++ +Y KC + +A VF+
Sbjct: 308 LTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQ 367
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ K + VSWN +I+ ++ E +F+ M + +KPD ITF V+ AC+++A LE
Sbjct: 368 NMPKT-NVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLE 426
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
++H +I ++ L + VM L+D+Y KCG++ A +FN + D VSW+S+I Y
Sbjct: 427 KGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYG 486
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
G EALKLF +M+ P+ VT + +L+ACSH GLV+EG + + M EYG P
Sbjct: 487 SHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAV 546
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQ 563
EH SC++DLL R G + EA + + +
Sbjct: 547 EHYSCLIDLLGRVGRLREAYEILQR 571
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 241/481 (50%), Gaps = 46/481 (9%)
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
S++K C + G+ +H ++ +++ +LI +Y A+ VF I
Sbjct: 8 SLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENP 67
Query: 201 -DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----- 254
D+T W ++AA +K +E L F+ +LH +P+ F + SV ACS R+
Sbjct: 68 LDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKM 127
Query: 255 -----------------------------------LFNEIDSPDLASWNALIAGVASHSN 279
LF+E+ D+ASWN +I+
Sbjct: 128 VHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ 187
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
+A+ LF EM+ PD +T+ +++ +C L L +G ++H +++ GF + V +A
Sbjct: 188 PEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSA 247
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
++ MY KC L A VF+++ + + VSWNS+IA ++ LF RM I+P
Sbjct: 248 LVDMYGKCGCLEMAKEVFEQIQRK-NVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRP 306
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
T + ++ AC++ +L++ +H YI + + D+FV + L+D+Y KCG++GSA +F
Sbjct: 307 TLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVF 366
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
M +VVSW+ +I GY + G EAL +FT MR GV P+ +T VL ACS + ++E
Sbjct: 367 QNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLE 426
Query: 520 EGLHLYR-IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+G ++ I+E++ I ++D+ A+ G V EA NQ+ + D V W S++A
Sbjct: 427 KGKEIHNFIIESKLEI--NEVVMGALLDMYAKCGAVDEALHIFNQLP-ERDFVSWTSMIA 483
Query: 579 S 579
+
Sbjct: 484 A 484
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/475 (30%), Positives = 228/475 (48%), Gaps = 51/475 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY ++ ACS L + G+ VH H++ S DVV+ + + MY KC EDA FD+M
Sbjct: 108 TYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEM 167
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+R+V SW +I+ Q+ Q A++L+ +M SG P T ++I +C+ L + G+
Sbjct: 168 PERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGK 227
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H +++S +AL+ MY K + A+ VF I RK+V SW SMIA +S G
Sbjct: 228 EIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKG 287
Query: 217 YELEALCHFNEMLHHGA-------------------YQPNEFIFGSV------------- 244
+ F M G Q +FI G +
Sbjct: 288 DSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNS 347
Query: 245 -----FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
+ C N A +F + ++ SWN +I+G + EA+ +F++MR + P
Sbjct: 348 SLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKP 407
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D +T S+L AC L +G ++H++II+ + N V A+L MYAKC + AL +F
Sbjct: 408 DAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIF 467
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+L + D VSW S+IAA H QA E +LF +M S KPD +TF ++ AC+
Sbjct: 468 NQLPER-DFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAG-- 524
Query: 418 EMVTQLHCY-----ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
+ CY I + G V + L+D+ + G L A ++ PD+
Sbjct: 525 --LVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQ--RTPDI 575
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 207/438 (47%), Gaps = 44/438 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T +IS+C+ L L+ G+++H ++ S D + + +++MYGKCG LE A+ F+++
Sbjct: 209 TLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQI 268
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++NVVSW +MIAG S I+L+ +M + G+ P T SI+ ACS ++ LG+
Sbjct: 269 QRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGK 328
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H ++I++ + + ++LI +Y K I A NVF + + +V SW MI+ + K+G
Sbjct: 329 FIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVG 388
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
LEAL F +M G +P+ F SV ACS A +
Sbjct: 389 SYLEALVIFTDMRKAGV-KPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVM 447
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+FN++ D SW ++IA SH A EA+ LF +M+ +
Sbjct: 448 GALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAK 507
Query: 297 PDGLTVHSLLCACIGRLTLYQG-MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD +T ++L AC + +G + I + GF V + ++ + + L A
Sbjct: 508 PDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYE 567
Query: 356 VFKELGKNADSVS-WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+ + + V +++ +AC H + +L R+L + D T+ + A +
Sbjct: 568 ILQRTPDIREDVGLLSTLFSACHLHKKL-DLGEQIGRLLIEKDPDDPSTYIILSNMYASV 626
Query: 415 ASLEMVTQLHCYITKTGL 432
+ V ++ I + GL
Sbjct: 627 KKWDEVRKVRLKIKELGL 644
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 150/282 (53%), Gaps = 3/282 (1%)
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D + SLL CI L QG +H I+ +G +N+ +C +++ +Y C + +A LVF
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA-SQIKPDHITFNDVMGACAKMAS 416
+ + D WN ++AAC ++ E +F R+L +KPD T+ V+ AC+ +
Sbjct: 62 QTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGR 121
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
+ +H ++ K+G A DV VM+ + +Y KC A KLF+ M DV SW+++I
Sbjct: 122 VGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISC 181
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y Q G ++AL+LF M+ G P+ VTL V+++C+ + +E G ++ + G
Sbjct: 182 YYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRS-GFAL 240
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
S +VD+ + GC+ A++ Q+ ++V W S++A
Sbjct: 241 DGFVSSALVDMYGKCGCLEMAKEVFEQIQ-RKNVVSWNSMIA 281
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 197/390 (50%), Gaps = 30/390 (7%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IRP+ T + ++ ACS +LQLG+ +H +I+ ++ + D+ + + ++++Y KCG++ A
Sbjct: 304 IRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAE 363
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F MP+ NVVSW MI+G + +A+ ++ M ++GV P TF S++ ACS L
Sbjct: 364 NVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLA 423
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ G+++H +I+S+ + + AL+ MY K + +A ++F+ + +D SW SMIA
Sbjct: 424 VLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIA 483
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS---- 261
A+ G EAL F +M A +P++ F ++ SACS+ + FN++ +
Sbjct: 484 AYGSHGQAFEALKLFEKMQQSDA-KPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGF 542
Query: 262 -PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
P + ++ LI + EA + R ++ D + +L AC L G Q
Sbjct: 543 KPAVEHYSCLIDLLGRVGRLREAYEILQ--RTPDIREDVGLLSTLFSACHLHKKLDLGEQ 600
Query: 321 VHSYIIKMGFDSNVPVCNAILT-MYA---KCSVLCNALLVFKELG-KNADSVSW------ 369
+ +I+ D + P IL+ MYA K + L KELG K SW
Sbjct: 601 IGRLLIEK--DPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKR 658
Query: 370 -NSIIAACLQHNQAEELFRLFSRMLASQIK 398
+ + H QA+ ++ S +LAS ++
Sbjct: 659 IHPFVVEDKSHPQADMIYECMS-ILASHVE 687
>gi|449453101|ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
gi|449521874|ref|XP_004167954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
Length = 697
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 186/609 (30%), Positives = 300/609 (49%), Gaps = 75/609 (12%)
Query: 35 PST-YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
P T Y L CSS R+L RKV H+ P + L N + YGKCG L+DAR F
Sbjct: 58 PHTLYTRLFQLCSSTRALVEARKVESHLATFCPTPPIFLLNRAIEAYGKCGCLKDARELF 117
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
D+MPQR+ SW AMI +QN +A+ LY+ + +SGV + T SI+++C + ++
Sbjct: 118 DEMPQRDGGSWNAMITAYTQNGYALEALNLYLDLNKSGVYATEVTLASILRSCGSVLALH 177
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
RQ+H H++K ++I +++L+ +Y K + DAR++F I ++ SW ++ +
Sbjct: 178 FSRQIHGHIVKCGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYL 237
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL------------------ 255
++G EA+ F +M + P+ F F + ACS A ++
Sbjct: 238 EVGNGKEAVSMFFQMFRE-SLMPSSFTFSNALIACSRMAALIEGGQIHGIVVKVGLEENE 296
Query: 256 ----------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
F + S +L SW +++ A+ + +A LF+EM +R
Sbjct: 297 VISSSLIDMYVKCGTLANAHQVFTQPSSRNLISWTSMVYAYATSGDVLKARELFNEMPER 356
Query: 294 ELLP-------------------------------DGLTVHSLLCACIGRLTLYQGMQVH 322
++ D T+ +L C G + +G QVH
Sbjct: 357 NVISWNAMLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVH 416
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
++ + GF +N+ + NA+L MY KC L +A + F ++ + D VSWN+++ A +H +
Sbjct: 417 GFVYRTGFYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMS 476
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
E+ +FS M + P++ TF ++GACA M +LE Q+H ++ + A D+ + L
Sbjct: 477 EQAMTIFSEM-QLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGAL 535
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR-SLGVSPN 501
+D+Y KC L A K+F + + DVV W+S+ILG A+KLF M G+ P+
Sbjct: 536 VDMYCKCRELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPD 595
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
VT G+L AC H LVE G + M ++ +IP EH C+V+L + G + E E FI
Sbjct: 596 HVTFQGILLACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFI 655
Query: 562 NQMACDADI 570
N M D +
Sbjct: 656 NNMPFDPTV 664
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 180/364 (49%), Gaps = 33/364 (9%)
Query: 247 ACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
C AR LF+E+ D SWNA+I + A EA++L+ ++ + +T+ S+L
Sbjct: 108 GCLKDARELFDEMPQRDGGSWNAMITAYTQNGYALEALNLYLDLNKSGVYATEVTLASIL 167
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
+C L L+ Q+H +I+K GF NV + ++++ +Y KC ++ +A +F E+ +N +
Sbjct: 168 RSCGSVLALHFSRQIHGHIVKCGFVGNVILESSLVDVYGKCRLMNDARSMFDEI-QNRND 226
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
VSWN I+ L+ +E +F +M + P TF++ + AC++MA+L Q+H
Sbjct: 227 VSWNVIVRRYLEVGNGKEAVSMFFQMFRESLMPSSFTFSNALIACSRMAALIEGGQIHGI 286
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGS-------------------------------A 455
+ K GL + + + L+D+Y+KCG+L + A
Sbjct: 287 VVKVGLEENEVISSSLIDMYVKCGTLANAHQVFTQPSSRNLISWTSMVYAYATSGDVLKA 346
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
R+LFN M +V+SW++++ GY +EAL+ MRS + TL +L C+
Sbjct: 347 RELFNEMPERNVISWNAMLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGS 406
Query: 516 GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
VE G ++ + G + ++D+ + G + A+ + QM+ D V W +
Sbjct: 407 SDVERGKQVHGFVYRT-GFYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNA 465
Query: 576 LLAS 579
LL +
Sbjct: 466 LLTA 469
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 130/269 (48%), Gaps = 3/269 (1%)
Query: 309 CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS 368
C L + +V S++ + + N + Y KC L +A +F E+ + D S
Sbjct: 69 CSSTRALVEARKVESHLATFCPTPPIFLLNRAIEAYGKCGCLKDARELFDEMPQR-DGGS 127
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
WN++I A Q+ A E L+ + S + +T ++ +C + +L Q+H +I
Sbjct: 128 WNAMITAYTQNGYALEALNLYLDLNKSGVYATEVTLASILRSCGSVLALHFSRQIHGHIV 187
Query: 429 KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
K G +V + + L+D+Y KC + AR +F+ ++N + VSW+ ++ Y + G G EA+
Sbjct: 188 KCGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYLEVGNGKEAVS 247
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLL 548
+F +M + P+ T L ACS + + EG ++ I+ + G+ S ++D+
Sbjct: 248 MFFQMFRESLMPSSFTFSNALIACSRMAALIEGGQIHGIVV-KVGLEENEVISSSLIDMY 306
Query: 549 ARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ G + A Q +++ W S++
Sbjct: 307 VKCGTLANAHQVFTQ-PSSRNLISWTSMV 334
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%)
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
M + + N LL K L ++ N+ + L++ + L + + S H
Sbjct: 1 MGVSAASILNRLLSRKNLTARSEFTDANAATSTILRYLEEGRLGKAVLILFNSPFPFPHT 60
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
+ + C+ +L ++ ++ +F++N ++ Y KCG L AR+LF+ M
Sbjct: 61 LYTRLFQLCSSTRALVEARKVESHLATFCPTPPIFLLNRAIEAYGKCGCLKDARELFDEM 120
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
D SW+++I Y Q G EAL L+ + GV VTL +L +C V
Sbjct: 121 PQRDGGSWNAMITAYTQNGYALEALNLYLDLNKSGVYATEVTLASILRSCGSV 173
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 177/583 (30%), Positives = 291/583 (49%), Gaps = 42/583 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +I C+ L +++LG+ + D IL D+ + + ++ +Y G +EDAR FDKM
Sbjct: 12 TFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKM 71
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++ V W MI G Q + + AIKL+ M+ S P TF ++ V GR
Sbjct: 72 IDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGR 131
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
QLH V++S + N L+ +Y+K ++ DAR +F + + D+ W MI + + G
Sbjct: 132 QLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNG 191
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
+ +A FNEM+ G +P+ F S + + + +
Sbjct: 192 FMDDASMLFNEMISAGI-KPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLN 250
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+FN D+ + A+I+G + +A+ +F + ++++
Sbjct: 251 SALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMI 310
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P+ LT S+L AC G + G ++H YIIK + PV +AI+ MYAKC L A L+
Sbjct: 311 PNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLI 370
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + D++ WNSII + Q + EE LF +M +K D +T + + ACA + +
Sbjct: 371 FGRISIK-DAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPA 429
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L ++H ++ K D+F M+ L+++Y KCG L AR +FN M+ + V+W+S+I
Sbjct: 430 LHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAA 489
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y G ++L LF M G+ P+ +T + +L++C H G VE+G+ +R M EYGI
Sbjct: 490 YGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPA 549
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH +C+ DL RAG + EA + I M VW +LL +
Sbjct: 550 QMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGA 592
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 233/493 (47%), Gaps = 44/493 (8%)
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
ML GV P ++TF +IK C+GL +V LG+ + +++ + ++LI +Y
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
I DAR F + KD W MI + + G A+ F +M+ A +P+ F V S
Sbjct: 61 IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEA-KPDSVTFACVLS 119
Query: 247 -ACSNF---------------------------------------ARILFNEIDSPDLAS 266
+CS AR LF+ + DL
Sbjct: 120 ISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVV 179
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WN +I G + ++A LF+EM + PD +T S L + +L Q ++H YI+
Sbjct: 180 WNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIV 239
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+ G +V + +A++ +Y KC A +F L D V + ++I+ + + ++
Sbjct: 240 RHGVILDVYLNSALIDLYFKCRDAVMACKMFN-LSTKFDIVIYTAMISGYVLNGMNKDAL 298
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
+F +L ++ P+ +TF+ ++ ACA +A++++ +LH YI K L V + +M++Y
Sbjct: 299 EIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMY 358
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KCG L A +F + D + W+S+I ++Q G +EA+ LF +M GV + VT+
Sbjct: 359 AKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVS 418
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
L+AC+++ + G ++ M S ++++ A+ G ++ A N M
Sbjct: 419 AALSACANIPALHYGKEIHGFMIKG-AFESDLFDMSALINMYAKCGKLNIARLVFNLMQ- 476
Query: 567 DADIVVWKSLLAS 579
+ + V W S++A+
Sbjct: 477 EKNEVAWNSIIAA 489
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 189/637 (29%), Positives = 327/637 (51%), Gaps = 68/637 (10%)
Query: 4 DYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHI 61
D + S + NL EA++ Y + + I+P YA L+ A + L+ ++LG+++H H+
Sbjct: 67 DLLRSKVRSNLLREAVLTY---VDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 62 LLSKCQPD-VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
D V + N ++N+Y KCG FD++ +RN VSW ++I+ + A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLG---SVCLGRQLHAHVI-KSEHGSHLIAQNA 176
++ + ML V P FT S++ ACS L + +G+Q+HA+ + K E S +I N
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NT 241
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
L+AMY K ++ ++ + +D+ +W +++++ + LEAL + EM+ G +P
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV-EP 300
Query: 237 NEFIFGSVFSACSNF-----------------------------------------ARIL 255
+EF SV ACS+ R +
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE-LLPDGLTVHSLLCACIGRLT 314
F+ + + WNA+IAG + + + EA+ LF M + LL + T+ ++ AC+
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
+ +H +++K G D + V N ++ MY++ + A+ +F ++ ++ D V+WN++I
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNTMIT 479
Query: 375 ACLQHNQAEELFRLFSRML---------ASQI--KPDHITFNDVMGACAKMASLEMVTQL 423
+ E+ L +M AS++ KP+ IT ++ +CA +++L ++
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H Y K LA DV V + L+D+Y KCG L +RK+F+ + +V++W+ +I+ Y G G
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
EA+ L M GV PN VT + V ACSH G+V+EGL ++ +M+ +YG+ P+ +H +C
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIV-VWKSLLAS 579
VVDLL RAG + EA +N M D + W SLL +
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 137/536 (25%), Positives = 244/536 (45%), Gaps = 72/536 (13%)
Query: 104 WTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI 163
W ++ ++ +A+ Y+ M+ G+ P + F +++KA + L + LG+Q+HAHV
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 164 KSEHG-SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA---AFSKLGYEL 219
K +G + N L+ +Y K VF I+ ++ SW S+I+ +F K L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 220 EAL-CHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------------- 251
EA C +E + +P+ F SV +ACSN
Sbjct: 185 EAFRCMLDENV-----EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII 239
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+++L DL +WN +++ + + EA+ EM +
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALL 355
PD T+ S+L AC L G ++H+Y +K G D N V +A++ MY C + +
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ-IKPDHITFNDVMGACAKM 414
VF + + WN++IA Q+ +E LF M S + + T V+ AC +
Sbjct: 360 VFDGMFDRKIGL-WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRS 418
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+ +H ++ K GL D FV N LMD+Y + G + A ++F ME+ D+V+W+++I
Sbjct: 419 GAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMI 478
Query: 475 LGYAQFGCGDEALKLFTRMRSL-----------GVSPNLVTLVGVLTACSHVGLVEEG-- 521
GY ++AL L +M++L + PN +TL+ +L +C+ + + +G
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+H Y I N + S +VD+ A+ GC+ + +Q+ +++ W ++
Sbjct: 539 IHAYAIKNNLATDVAV---GSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVII 590
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 251/531 (47%), Gaps = 63/531 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSL---RSLQLGRKVHD 59
N +SSLC + AL A+ + N+ T +++ACS+L L +G++VH
Sbjct: 168 NSLISSLCSFEKWEMALEAFR-CMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA 226
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
+ L K + + + N ++ MYGK G L +++ R++V+W +++ QN Q +
Sbjct: 227 YGL-RKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLE 285
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH-GSHLIAQNALI 178
A++ +M+ GV P +FT S++ ACS L + G++LHA+ +K+ + +AL+
Sbjct: 286 ALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALV 345
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM---------- 228
MY ++L R VF G+ + + W +MIA +S+ ++ EAL F M
Sbjct: 346 DMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANS 405
Query: 229 ----------LHHGAYQPNEFIFG---------------SVFSACSNFARI-----LFNE 258
+ GA+ E I G ++ S +I +F +
Sbjct: 406 TTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGK 465
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE-----------LLPDGLTVHSLLC 307
++ DL +WN +I G + +A+ L +M++ E L P+ +T+ ++L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
+C L +G ++H+Y IK ++V V +A++ MYAKC L + VF ++ + + +
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVI 584
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
+WN II A H +E L M+ +KP+ +TF V AC+ ++ ++ Y+
Sbjct: 585 TWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YV 643
Query: 428 TKT--GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP--DVVSWSSLI 474
K G+ ++D+ + G + A +L N M +WSSL+
Sbjct: 644 MKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 10/288 (3%)
Query: 244 VFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
V SA S I ++ SP+ W L+ + EA+ + +M + PD
Sbjct: 44 VASAVSGAPSIFISQSRSPEW--WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFP 101
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFD-SNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
+LL A + G Q+H+++ K G+ +V V N ++ +Y KC VF + +
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE 161
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE---M 419
+ VSWNS+I++ + E F ML ++P T V+ AC+ + E M
Sbjct: 162 R-NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMM 220
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
Q+H Y + G + F++N L+ +Y K G L S++ L D+V+W++++ Q
Sbjct: 221 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLY 525
EAL+ M GV P+ T+ VL ACSH+ ++ G LH Y
Sbjct: 280 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAY 327
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 15/219 (6%)
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
W ++ + ++ N E + M+ IKPD+ F ++ A A + +E+ Q+H ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 429 KTGLAFD-VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K G D V V N L+++Y KCG G+ K+F+ + + VSW+SLI F + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE-----EGLHLYRIMENEYG--IIPTREH 540
+ F M V P+ TLV V+TACS++ + E + +H Y + + E II T
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT--- 241
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+V + + G + ++ + D+V W ++L+S
Sbjct: 242 ---LVAMYGKLGKLASSKVLLGSFG-GRDLVTWNTVLSS 276
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 184/590 (31%), Positives = 304/590 (51%), Gaps = 49/590 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY+ + C RS +G VH+ + S Q D V N ++++Y KCG E A F M
Sbjct: 68 TYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLM 127
Query: 97 -PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
R+++SW+AM++ + N A+ ++ M+++G P ++ F + +ACS V +G
Sbjct: 128 GSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVG 187
Query: 156 RQLHAHVIKSEH-GSHLIAQNALIAMYTK-FDRILDARNVFSGIARKDVTSWGSMIAAFS 213
+ VIK+ + S + LI M+ K ++ A VF + ++ +W MI
Sbjct: 188 DSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLM 247
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------- 251
+ GY EA+ F +M+ G Y+P+ F V SAC+N
Sbjct: 248 QFGYAGEAIDLFLDMIFSG-YEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDR 306
Query: 252 ---------------------ARILFNEIDSPDLASWNALIAGVASHSNANE-AMSLFSE 289
AR +F++I ++ SW A+I G +E A+ LF
Sbjct: 307 CVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRG 366
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M ++P+ T S L AC L G QV ++ +K+GF S V N++++MYA+
Sbjct: 367 MILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGR 426
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ +A F L + + +S+N++I A ++ +EE LF+ + + TF ++
Sbjct: 427 IDDARKAFDILFEK-NLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLS 485
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
A + ++ Q+H + K+GL + V N L+ +Y +CG++ SA ++F ME+ +V+S
Sbjct: 486 GAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVIS 545
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+S+I G+A+ G +AL+LF +M GV PN VT + VL+ACSHVGLV EG ++ M
Sbjct: 546 WTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMY 605
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
E+G+IP EH +C+VD+L R+G + EA FIN M AD +VW++ L +
Sbjct: 606 TEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGA 655
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/513 (24%), Positives = 239/513 (46%), Gaps = 53/513 (10%)
Query: 114 NYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA 173
N + + AI M+ G P T+ +K C S +G +H + +S+ +
Sbjct: 44 NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103
Query: 174 QNALIAMYTKFDRILDARNVFSGI-ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
N+LI++Y+K + A ++F + + +D+ SW +M++ F+ AL F +M+ +G
Sbjct: 104 LNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163
Query: 233 AYQPNEFIFGSVFSACSN--FARI------------------------------------ 254
Y PNE+ F + ACS F +
Sbjct: 164 -YYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLV 222
Query: 255 ----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+F ++ + +W +I + A EA+ LF +M PD T+ ++ AC
Sbjct: 223 SAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACA 282
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV---LCNALLVFKELGKNADSV 367
L G Q+HS I+ G + V ++ MYAKCSV +C A +F ++ + +
Sbjct: 283 NMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI-LDHNVF 341
Query: 368 SWNSIIAACLQH-NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
SW ++I +Q EE LF M+ + + P+H TF+ + ACA +A+L + Q+ +
Sbjct: 342 SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTH 401
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
K G + V N L+ +Y + G + ARK F+ + +++S++++I YA+ +EA
Sbjct: 402 AVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEA 461
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVV 545
L+LF + G+ + T +L+ + +G + +G ++ R++++ G+ + C+ ++
Sbjct: 462 LELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKS--GLKLNQSVCNALI 519
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +R G + A M D +++ W S++
Sbjct: 520 SMYSRCGNIESAFQVFEDME-DRNVISWTSIIT 551
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 126/483 (26%), Positives = 227/483 (46%), Gaps = 56/483 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC---GSLEDARMGF 93
T +G+ISAC+++ L LG+++H + D + ++NMY KC GS+ AR F
Sbjct: 273 TLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIF 332
Query: 94 DKMPQRNVVSWTAMIAGCSQN--YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
D++ NV SWTAMI G Q Y E +A+ L+ M+ + V+P FTF S +KAC+ L +
Sbjct: 333 DQILDHNVFSWTAMITGYVQKGGYDE-EALDLFRGMILTHVIPNHFTFSSTLKACANLAA 391
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ +G Q+ H +K S N+LI+MY + RI DAR F + K++ S+ ++I A
Sbjct: 392 LRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDA 451
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------------- 254
++K EAL FNE+ G + F F S+ S ++ I
Sbjct: 452 YAKNLNSEEALELFNEIEDQGM-GASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKL 510
Query: 255 -----------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
+F +++ ++ SW ++I G A H A +A+ LF +M
Sbjct: 511 NQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKML 570
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ + P+ +T ++L AC + +G + S + G + I+ + + L
Sbjct: 571 EEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSL 630
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD---HITFNDV 407
A+ + AD++ W + + AC H EL + ++M+ Q D +I +++
Sbjct: 631 SEAIQFINSMPYKADALVWRTFLGACRVHGNL-ELGKHAAKMIIEQEPHDPAAYILLSNL 689
Query: 408 MGACAK---MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
+ +K ++++ + I + G ++ V V N + Y+ S A ++++ ++N
Sbjct: 690 YASISKWDEVSNIRKAMKEKXLIKEAGCSW-VEVENKVHKFYVGDTSHPKAAEIYDELQN 748
Query: 465 PDV 467
V
Sbjct: 749 LSV 751
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 183/592 (30%), Positives = 298/592 (50%), Gaps = 57/592 (9%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNM----YGKCGSLEDARMGF 93
Y L++ ++ +S+ + +H H++ + HIL+ Y CG + AR F
Sbjct: 18 YQSLLNHYAATQSISKTKALHCHVITGG-----RVSGHILSTLSVTYALCGHIAYARKLF 72
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV--MPGQFTFGSIIKACSGLGS 151
D+MPQ +++S+ +I ++ +DAI ++I+M+ G+ +P +T+ + KA L S
Sbjct: 73 DEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKS 132
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ LG +H +++S G QNAL+AMY F R+ ARNVF + +DV SW +MI+
Sbjct: 133 ISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISG 192
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
+ + GY +AL F+ M++ G P+ S+ C +
Sbjct: 193 YYRNGYMNDALMMFDWMVNEGV-DPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGD 251
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
AR +F ++ D+ +W +I G + A+ L M+
Sbjct: 252 KIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQ 311
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ P+ +T+ SL+ AC L L G +H + I+ S++ + ++++MYAKC +
Sbjct: 312 FEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHID 371
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
VF +N + W++IIA C+Q+ + LF RM ++P+ T N ++ A
Sbjct: 372 LCFRVFSGASRN-HTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAY 430
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME----NPDV 467
A +A L +HCY+TKTG + GL+ +Y KCG+L SA K+FN ++ + DV
Sbjct: 431 ATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDV 490
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
V W +LI GY G G AL++F M GV+PN +T L ACSH GLVEEGL L+
Sbjct: 491 VLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSF 550
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M Y + H +C+VDLL RAG + EA + I + + +W +LLA+
Sbjct: 551 MLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAA 602
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/522 (26%), Positives = 230/522 (44%), Gaps = 71/522 (13%)
Query: 11 KQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQP 68
+ LY++A+ + + I+ P TY + A L+S+ LG +H IL S
Sbjct: 92 RDGLYHDAINVF-IRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGLVIHGRILRSWFGM 150
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D +QN +L MY G +E AR FD M R+V+SW MI+G +N NDA+ ++ M+
Sbjct: 151 DKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMV 210
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
GV P T S++ C L + +GR +H V + G + +NAL+ MY K R+
Sbjct: 211 NEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMD 270
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
+AR VF + R+DV +W MI + + G ++E ++ +PN S+ SAC
Sbjct: 271 EARFVFGRMERRDVITWTCMINGYIEDG-DVENALELCRLMQFEGVRPNAVTIASLVSAC 329
Query: 249 SNFARI----------------------------------------LFNEIDSPDLASWN 268
+ ++ +F+ W+
Sbjct: 330 GDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWS 389
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
A+IAG + +A+ LF MR ++ P+ T++SLL A L Q M +H Y+ K
Sbjct: 390 AIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKT 449
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVF---KELGKNADSVSWNSIIAACLQHNQAEEL 385
GF S++ ++ +Y+KC L +A +F +E K+ D V W ++I+ H
Sbjct: 450 GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNA 509
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG---- 441
++F M+ S + P+ ITF + AC+ H + + GL F++
Sbjct: 510 LQVFMEMVRSGVTPNEITFTSALNACS-----------HSGLVEEGLTLFSFMLEHYKTL 558
Query: 442 --------LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + G L A L + P W +L+
Sbjct: 559 ARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALL 600
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 187/428 (43%), Gaps = 51/428 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + N+AL+ +D+ N + +T ++ C L+ L++GR VH +
Sbjct: 187 NTMISGYYRNGYMNDALMMFDWMVNE-GVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVE 245
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + ++N ++NMY KCG +++AR F +M +R+V++WT MI G ++ +A++
Sbjct: 246 EKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALE 305
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L M GV P T S++ AC + G+ LH I+ + S +I + +LI+MY
Sbjct: 306 LCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYA 365
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I VFSG +R W ++IA + +AL F M +PN
Sbjct: 366 KCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDV-EPNIATLN 424
Query: 243 S--------------------------------------VFSACSNF--ARILFNEID-- 260
S V+S C A +FN I
Sbjct: 425 SLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEK 484
Query: 261 --SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
S D+ W ALI+G H + + A+ +F EM + P+ +T S L AC + +G
Sbjct: 485 HKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEG 544
Query: 319 MQVHSYII---KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
+ + S+++ K SN C I+ + + L A + + S W +++AA
Sbjct: 545 LTLFSFMLEHYKTLARSNHYTC--IVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAA 602
Query: 376 CLQHNQAE 383
C+ H +
Sbjct: 603 CVTHENVQ 610
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 181/542 (33%), Positives = 283/542 (52%), Gaps = 40/542 (7%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L++A +S L R+V D + ++V N +L+ + G + D F +PQR+
Sbjct: 52 LLTAYASSGLLPHARRVFDAM----PGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRD 107
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQML--QSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
VS+ A++AG S+ A Y+ +L ++GV P + T ++ S LG LGRQ+
Sbjct: 108 AVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQV 167
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H +++ G++ + L+ MY K I DAR VF + K+V +MI +
Sbjct: 168 HCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMV 227
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHS 278
EA R LF I+ D +W ++ G+ +
Sbjct: 228 AEA-------------------------------RALFEAIEERDSITWTTMVTGLTQNG 256
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
+EA+ +F MR + D T S+L AC L +G Q+H+YI + ++ NV V +
Sbjct: 257 LESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGS 316
Query: 339 AILTMYAKCSVLCNALLVFKEL-GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
A++ MY+KC + A VF+ + KN +SW ++I Q+ EE R+FS M I
Sbjct: 317 ALVDMYSKCRSVRLAEAVFRRMMWKNI--ISWTAMIVGYGQNGCGEEAVRVFSEMQRDGI 374
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
KPD T V+ +CA +ASLE Q HC +GL V V N L+ +Y KCGS+ A +
Sbjct: 375 KPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHR 434
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
LF+ M D VSW++L++GYAQFG E + LF +M S GV P+ VT +GVL+ACS GL
Sbjct: 435 LFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGL 494
Query: 518 VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
V++G + M+ ++ I+P +H +C++DL +R+G + +AE+FI QM D W +LL
Sbjct: 495 VDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLL 554
Query: 578 AS 579
++
Sbjct: 555 SA 556
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 197/421 (46%), Gaps = 81/421 (19%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RPS T +G++ S+L LGR+VH IL + +++MY K G + DAR
Sbjct: 141 VRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDAR 200
Query: 91 MGFDKMPQRNVV-------------------------------SWTAMIAGCSQNYQEND 119
FD+M +NVV +WT M+ G +QN E++
Sbjct: 201 RVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESE 260
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
A+ ++ +M GV Q+TFGSI+ AC L ++ G+Q+HA++ ++ + ++ +AL+
Sbjct: 261 ALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVD 320
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY+K + A VF + K++ SW +MI + + G EA+ F+EM G +P++F
Sbjct: 321 MYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDG-IKPDDF 379
Query: 240 IFGSVFSACSNFARI----------------------------------------LFNEI 259
GSV S+C+N A + LF+E+
Sbjct: 380 TLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEM 439
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
D SW AL+ G A A E + LF +M + + PDG+T +L AC + +G
Sbjct: 440 SFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKG- 498
Query: 320 QVHSYIIKMGFDSN-VPVCN---AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
SY M D + VP+ + ++ +Y++ L A K++ + D+ W ++++A
Sbjct: 499 --RSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSA 556
Query: 376 C 376
C
Sbjct: 557 C 557
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 134/245 (54%), Gaps = 2/245 (0%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
V+ L + L +EAL + + I T+ +++AC +L +L+ G+++H +I +
Sbjct: 249 VTGLTQNGLESEALDVFR-RMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTC 307
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ +V + + +++MY KC S+ A F +M +N++SWTAMI G QN +A++++
Sbjct: 308 YEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFS 367
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + G+ P FT GS+I +C+ L S+ G Q H + S ++ NAL+ +Y K
Sbjct: 368 EMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCG 427
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I DA +F ++ D SW +++ +++ G E + F +ML G +P+ F V
Sbjct: 428 SIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGV-KPDGVTFIGVL 486
Query: 246 SACSN 250
SACS
Sbjct: 487 SACSR 491
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 126/268 (47%), Gaps = 34/268 (12%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+P T +IS+C++L SL+ G + H L+S +P V + N ++ +YGKCGS+EDA
Sbjct: 374 IKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAH 433
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+M + VSWTA++ G +Q + + I L+ +ML GV P TF ++ ACS G
Sbjct: 434 RLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSG 493
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILDARNVFSGIAR-KDVTSWGS 207
V GR + H ++ +H + + +I +Y++ + A + R D W +
Sbjct: 494 LVDKGRS-YFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWAT 552
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASW 267
+++A C + G + + ++D + AS+
Sbjct: 553 LLSA-----------CRLRGDMEIGKWAAENLL-----------------KLDPQNPASY 584
Query: 268 NALIAGVASHSNANEAMSLFSEMRDREL 295
L + AS N+ L MRDR++
Sbjct: 585 VLLCSMHASKGEWNDVAKLRRGMRDRQV 612
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/564 (30%), Positives = 300/564 (53%), Gaps = 45/564 (7%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-N 100
++A S+L L LG+ +H I+ Q ++ L ++N+Y C + A++ F + +
Sbjct: 203 VTAGSALEEL-LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLD 261
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGRQLH 159
+ W ++A C++N+ + ++++ ++L + P FT+ S++KACSGLG V G+ +H
Sbjct: 262 ITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVH 321
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
HVIKS ++ ++ + MY K + DA +F + +DV SW ++I+ + + G
Sbjct: 322 THVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPE 381
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------------- 251
+AL F EM G ++P+ +V S+C+
Sbjct: 382 KALELFEEMKVSG-FKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSAL 440
Query: 252 ------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
A+ +F +I ++ SWN++IAG + ++ + LF M + + P
Sbjct: 441 VDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTL 500
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
T+ S+L AC + L G +H YII+ ++++ V ++++ +Y KC + +A VF+
Sbjct: 501 TTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQN 560
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
+ K + VSWN +I+ ++ E +F+ M + +KPD ITF V+ AC+++A LE
Sbjct: 561 MPKT-NVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEK 619
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
++H +I ++ L + VM L+D+Y KCG++ A +FN + D VSW+S+I Y
Sbjct: 620 GKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGS 679
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTRE 539
G EALKLF +M+ P+ VT + +L+ACSH GLV+EG + + M EYG P E
Sbjct: 680 HGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVE 739
Query: 540 HCSCVVDLLARAGCVHEAEDFINQ 563
H SC++DLL R G + EA + + +
Sbjct: 740 HYSCLIDLLGRVGRLREAYEILQR 763
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/468 (29%), Positives = 236/468 (50%), Gaps = 46/468 (9%)
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK-DVTSWGSMIAAF 212
LG+ +H ++ +++ +LI +Y A+ VF I D+T W ++AA
Sbjct: 213 LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAAC 272
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------ 254
+K +E L F+ +LH +P+ F + SV ACS R+
Sbjct: 273 TKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMD 332
Query: 255 ----------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
LF+E+ D+ASWN +I+ +A+ LF EM+
Sbjct: 333 VVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKV 392
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
PD +T+ +++ +C L L +G ++H +++ GF + V +A++ MY KC L
Sbjct: 393 SGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEM 452
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A VF+++ + + VSWNS+IA ++ LF RM I+P T + ++ AC+
Sbjct: 453 AKEVFEQIQRK-NVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACS 511
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+ +L++ +H YI + + D+FV + L+D+Y KCG++GSA +F M +VVSW+
Sbjct: 512 RSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNV 571
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR-IMENE 531
+I GY + G EAL +FT MR GV P+ +T VL ACS + ++E+G ++ I+E++
Sbjct: 572 MISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESK 631
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
I ++D+ A+ G V EA NQ+ + D V W S++A+
Sbjct: 632 LEI--NEVVMGALLDMYAKCGAVDEALHIFNQLP-ERDFVSWTSMIAA 676
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/475 (30%), Positives = 228/475 (48%), Gaps = 51/475 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY ++ ACS L + G+ VH H++ S DVV+ + + MY KC EDA FD+M
Sbjct: 300 TYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEM 359
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+R+V SW +I+ Q+ Q A++L+ +M SG P T ++I +C+ L + G+
Sbjct: 360 PERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGK 419
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H +++S +AL+ MY K + A+ VF I RK+V SW SMIA +S G
Sbjct: 420 EIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKG 479
Query: 217 YELEALCHFNEMLHHGA-------------------YQPNEFIFGSV------------- 244
+ F M G Q +FI G +
Sbjct: 480 DSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNS 539
Query: 245 -----FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
+ C N A +F + ++ SWN +I+G + EA+ +F++MR + P
Sbjct: 540 SLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKP 599
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D +T S+L AC L +G ++H++II+ + N V A+L MYAKC + AL +F
Sbjct: 600 DAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIF 659
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+L + D VSW S+IAA H QA E +LF +M S KPD +TF ++ AC+
Sbjct: 660 NQLPER-DFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAG-- 716
Query: 418 EMVTQLHCY-----ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
+ CY I + G V + L+D+ + G L A ++ PD+
Sbjct: 717 --LVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQ--RTPDI 767
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 207/438 (47%), Gaps = 44/438 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T +IS+C+ L L+ G+++H ++ S D + + +++MYGKCG LE A+ F+++
Sbjct: 401 TLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQI 460
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++NVVSW +MIAG S I+L+ +M + G+ P T SI+ ACS ++ LG+
Sbjct: 461 QRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGK 520
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H ++I++ + + ++LI +Y K I A NVF + + +V SW MI+ + K+G
Sbjct: 521 FIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVG 580
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
LEAL F +M G +P+ F SV ACS A +
Sbjct: 581 SYLEALVIFTDMRKAGV-KPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVM 639
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+FN++ D SW ++IA SH A EA+ LF +M+ +
Sbjct: 640 GALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAK 699
Query: 297 PDGLTVHSLLCACIGRLTLYQG-MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD +T ++L AC + +G + I + GF V + ++ + + L A
Sbjct: 700 PDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYE 759
Query: 356 VFKELGKNADSVS-WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+ + + V +++ +AC H + +L R+L + D T+ + A +
Sbjct: 760 ILQRTPDIREDVGLLSTLFSACHLHKKL-DLGEQIGRLLIEKDPDDPSTYIILSNMYASV 818
Query: 415 ASLEMVTQLHCYITKTGL 432
+ V ++ I + GL
Sbjct: 819 KKWDEVRKVRLKIKELGL 836
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 197/390 (50%), Gaps = 30/390 (7%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IRP+ T + ++ ACS +LQLG+ +H +I+ ++ + D+ + + ++++Y KCG++ A
Sbjct: 496 IRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAE 555
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F MP+ NVVSW MI+G + +A+ ++ M ++GV P TF S++ ACS L
Sbjct: 556 NVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLA 615
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ G+++H +I+S+ + + AL+ MY K + +A ++F+ + +D SW SMIA
Sbjct: 616 VLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIA 675
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS---- 261
A+ G EAL F +M A +P++ F ++ SACS+ + FN++ +
Sbjct: 676 AYGSHGQAFEALKLFEKMQQSDA-KPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGF 734
Query: 262 -PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
P + ++ LI + EA + R ++ D + +L AC L G Q
Sbjct: 735 KPAVEHYSCLIDLLGRVGRLREAYEILQ--RTPDIREDVGLLSTLFSACHLHKKLDLGEQ 792
Query: 321 VHSYIIKMGFDSNVPVCNAILT-MYA---KCSVLCNALLVFKELG-KNADSVSW------ 369
+ +I+ D + P IL+ MYA K + L KELG K SW
Sbjct: 793 IGRLLIEK--DPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKR 850
Query: 370 -NSIIAACLQHNQAEELFRLFSRMLASQIK 398
+ + H QA+ ++ S +LAS ++
Sbjct: 851 IHPFVVEDKSHPQADMIYECMS-ILASHVE 879
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 147/277 (53%), Gaps = 9/277 (3%)
Query: 309 CIGRLTLYQGMQ------VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
C+ R+T ++ +H I+ +G +N+ +C +++ +Y C + +A LVF+ +
Sbjct: 199 CLARVTAGSALEELLGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIEN 258
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLA-SQIKPDHITFNDVMGACAKMASLEMVT 421
D WN ++AAC ++ E +F R+L +KPD T+ V+ AC+ + +
Sbjct: 259 PLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGK 318
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
+H ++ K+G A DV VM+ + +Y KC A KLF+ M DV SW+++I Y Q G
Sbjct: 319 MVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDG 378
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC 541
++AL+LF M+ G P+ VTL V+++C+ + +E G ++ + G
Sbjct: 379 QPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRS-GFALDGFVS 437
Query: 542 SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
S +VD+ + GC+ A++ Q+ ++V W S++A
Sbjct: 438 SALVDMYGKCGCLEMAKEVFEQIQ-RKNVVSWNSMIA 473
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 193/598 (32%), Positives = 318/598 (53%), Gaps = 53/598 (8%)
Query: 33 IRP---STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
IRP T++ L+ +C R +LG+ VH ++ + +PD VL N ++++Y K G L A
Sbjct: 57 IRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKA 116
Query: 90 RMGFDKMP---QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
+ F+ M +R+VVSW+AM+A N +E DAIKL+++ L+ G++P + + ++I+AC
Sbjct: 117 KDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRAC 176
Query: 147 SGLGSVCLGRQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILD-ARNVFSGIARKDVTS 204
S V +GR + ++K+ H S + +LI M+ K + + A VF ++ +V +
Sbjct: 177 SNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVT 236
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------ 252
W MI ++G+ EA+ F +M+ G ++ ++F SVFSAC+
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSG-FESDKFTLSSVFSACAELENLSLGRQLHSWA 295
Query: 253 -----------------------------RILFNEIDSPDLASWNALIAGVASHSN-ANE 282
R +F+ + + SW ALI G + N A E
Sbjct: 296 IRSGLADDVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATE 355
Query: 283 AMSLFSEMRDR-ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
A++LFSEM + + P+ T S AC G QV + K G SN V N+++
Sbjct: 356 AINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVI 415
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+M+ KC + +A F+ L + + VS+N+ + ++ E F L S + ++
Sbjct: 416 SMFVKCDRMEDARTAFESLSEK-NLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSA 474
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
TF ++ A + SL Q+H + K GL+ + V N L+ +Y KCGS+ +A ++F+
Sbjct: 475 FTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSL 534
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
M+N +V+SW+S+I G+A+ G + L+ F +M GV PN VT V +L+ACSHVGLV EG
Sbjct: 535 MDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEG 594
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ M ++ I P EH +C+VDLL RAG + +A +FIN M AD++VW++ L +
Sbjct: 595 WRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 186/407 (45%), Gaps = 58/407 (14%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC---GSLEDARMGF 93
T + + SAC+ L +L LGR++H + S DV + +++MY KC GS++D R F
Sbjct: 271 TLSSVFSACAELENLSLGRQLHSWAIRSGLADDV--ECSLVDMYAKCSADGSVDDCRKVF 328
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQ-ENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGS 151
D+M +V+SWTA+I G QN +AI L+ +M+ G V P FTF S KAC +
Sbjct: 329 DRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSD 388
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+G+Q+ H K S+ N++I+M+ K DR+ DAR F ++ K++ S+ + +
Sbjct: 389 PRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDG 448
Query: 212 FSK-LGYELEALCHFNEMLHHGAYQP---NEFIFGSVFSACSNFARI------------- 254
+ L +E H E+L A + + F F S+ S +N +
Sbjct: 449 TCRNLDFE-----HAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKL 503
Query: 255 ---------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
+F+ +D+ ++ SW ++I G A H A + F
Sbjct: 504 GLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETF 563
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAK 346
++M + P+ +T ++L AC + +G + +S + ++ + +
Sbjct: 564 NQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
+L +A + AD + W + + AC H+ EL +L +R +
Sbjct: 624 AGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNT-ELGKLAARKI 669
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 128/240 (53%), Gaps = 5/240 (2%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
NL EA+ FS+ T + P+ T++ AC ++ ++G++V H +
Sbjct: 351 NLATEAINL--FSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNS 408
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ N +++M+ KC +EDAR F+ + ++N+VS+ + G +N A +L ++ +
Sbjct: 409 SVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAER 468
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
+ FTF S++ + +GS+ G Q+H+ V+K + NALI+MY+K I A
Sbjct: 469 ELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTA 528
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
VFS + ++V SW SMI F+K G+ L FN+M G +PNE + ++ SACS+
Sbjct: 529 SRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGV-KPNEVTYVAILSACSH 587
>gi|302810635|ref|XP_002987008.1| hypothetical protein SELMODRAFT_182822 [Selaginella moellendorffii]
gi|300145173|gb|EFJ11851.1| hypothetical protein SELMODRAFT_182822 [Selaginella moellendorffii]
Length = 694
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 200/613 (32%), Positives = 298/613 (48%), Gaps = 59/613 (9%)
Query: 25 SQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL------LSKCQPDVVLQNHILN 78
+ N R T L+ ACSSL LQ G+ +H I+ + D+++ N ++N
Sbjct: 32 TMNQEGDRADEVTLTTLLGACSSLEDLQQGKMIHSLIVELGYGEQDGEEQDLMVGNSLVN 91
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MY KC SL DA FD+M R+V SWT M+ +QN Q AI+ Y QM GV P T
Sbjct: 92 MYAKCRSLADAIAIFDRMKNRSVFSWTIMVTAFAQNGQLQRAIQCYRQMCCDGVDPNAVT 151
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
F +++ ACS G + GR++ A V S S LI +A++ Y K R+ +AR F +
Sbjct: 152 FVALLAACSSGGELAAGRKIAARVEASGLDSDLIVGSAIVNFYGKCGRLDEAREAFDRMP 211
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------- 251
K+ +W MIAA+ + G +A+ F M G P+ S+ ACS
Sbjct: 212 AKNNVTWNGMIAAYVQSGAATQAMDLFATMEDEGVV-PDAMAVSSILGACSGLESGKRIH 270
Query: 252 --------------------------------ARILFNEIDSPDLASWNALIAGVASHSN 279
AR++F I S + SW +IA A N
Sbjct: 271 SAVIDRRQELQSDRAVCNALVHMYARCGSLDDARLVFLAIPSKNTVSWTTIIAAFAQQEN 330
Query: 280 ANE---AMSLFSEMRDRELLPDGLTVHSLL--CACIGRLTLYQGMQVHSYIIKMG---FD 331
++ A LF EM + P +T+ L C+ + R L G +H+ + G
Sbjct: 331 RDDIEAAFQLFREMDLDGVAPSEVTIFYALETCSKMDRGGLASGRALHTAMDTAGRVELL 390
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKE--LGKNADSVSWNSIIAACLQHNQAEELFRLF 389
S+V V N++L MYA C L +A +F + LGKN D VSW ++IAA +QH Q+ L
Sbjct: 391 SSVEVLNSLLDMYASCGSLIDAEAIFFDHLLGKNVDVVSWTNMIAAYVQHGQSSSALLLA 450
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
+M +K D I + ++GAC + + +LH + G A + V N L+ +Y
Sbjct: 451 KKMDLEGVKSDEIAMSTILGACTAHQATSLGRELHRRARELGYASNTIVGNALVFMYGSW 510
Query: 450 GSLGSARKLFNFMEN---PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
G + A ++F ++N P+ +++++I GYA+ G +AL L+ M GV P T
Sbjct: 511 GRVDDAARVFQELKNANSPNSNTFTAMIAGYARQGRTLQALSLYNEMNLHGVEPRDATFT 570
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
+ ACSH G + + L + + + G+ PT EH CVVDLL R+G V EAE+ + M
Sbjct: 571 SIFQACSHAGFLAKALEHFVFIYDFQGLEPTAEHFGCVVDLLGRSGFVREAEELVLAMPY 630
Query: 567 DADIVVWKSLLAS 579
+ DIV W+SLLAS
Sbjct: 631 EPDIVAWRSLLAS 643
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 231/488 (47%), Gaps = 64/488 (13%)
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
++NV SWT +I+ + +DA++L+ M Q G + T +++ ACS L + G+
Sbjct: 4 RKNVFSWTIIISAYVRADHGSDALQLFRTMNQEGDRADEVTLTTLLGACSSLEDLQQGKM 63
Query: 158 LHAHVIKSEHGSH------LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+H+ +++ +G L+ N+L+ MY K + DA +F + + V SW M+ A
Sbjct: 64 IHSLIVELGYGEQDGEEQDLMVGNSLVNMYAKCRSLADAIAIFDRMKNRSVFSWTIMVTA 123
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------------- 249
F++ G A+ + +M G PN F ++ +ACS
Sbjct: 124 FAQNGQLQRAIQCYRQMCCDGV-DPNAVTFVALLAACSSGGELAAGRKIAARVEASGLDS 182
Query: 250 ---------NF---------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
NF AR F+ + + + +WN +IA A +AM LF+ M
Sbjct: 183 DLIVGSAIVNFYGKCGRLDEAREAFDRMPAKNNVTWNGMIAAYVQSGAATQAMDLFATME 242
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII--KMGFDSNVPVCNAILTMYAKCSV 349
D ++PD + V S+L AC G L G ++HS +I + S+ VCNA++ MYA+C
Sbjct: 243 DEGVVPDAMAVSSILGACSG---LESGKRIHSAVIDRRQELQSDRAVCNALVHMYARCGS 299
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL---FRLFSRMLASQIKPDHITFND 406
L +A LVF + + ++VSW +IIAA Q +++ F+LF M + P +T
Sbjct: 300 LDDARLVFLAI-PSKNTVSWTTIIAAFAQQENRDDIEAAFQLFREMDLDGVAPSEVTIFY 358
Query: 407 VMGACAKM--ASLEMVTQLHCYITKTG---LAFDVFVMNGLMDIYIKCGSLGSARKLFN- 460
+ C+KM L LH + G L V V+N L+D+Y CGSL A +F
Sbjct: 359 ALETCSKMDRGGLASGRALHTAMDTAGRVELLSSVEVLNSLLDMYASCGSLIDAEAIFFD 418
Query: 461 --FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
+N DVVSW+++I Y Q G AL L +M GV + + + +L AC+
Sbjct: 419 HLLGKNVDVVSWTNMIAAYVQHGQSSSALLLAKKMDLEGVKSDEIAMSTILGACTAHQAT 478
Query: 519 EEGLHLYR 526
G L+R
Sbjct: 479 SLGRELHR 486
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 204/439 (46%), Gaps = 62/439 (14%)
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------ 251
+RK+V SW +I+A+ + + +AL F M G + +E ++ ACS+
Sbjct: 3 SRKNVFSWTIIISAYVRADHGSDALQLFRTMNQEGD-RADEVTLTTLLGACSSLEDLQQG 61
Query: 252 -------ARILFNEIDSP--DLASWNALIAGVASHSNANEAMSLFSEMRDRELL------ 296
+ + E D DL N+L+ A + +A+++F M++R +
Sbjct: 62 KMIHSLIVELGYGEQDGEEQDLMVGNSLVNMYAKCRSLADAIAIFDRMKNRSVFSWTIMV 121
Query: 297 -------------------------PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
P+ +T +LL AC L G ++ + + G D
Sbjct: 122 TAFAQNGQLQRAIQCYRQMCCDGVDPNAVTFVALLAACSSGGELAAGRKIAARVEASGLD 181
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
S++ V +AI+ Y KC L A F + ++V+WN +IAA +Q A + LF+
Sbjct: 182 SDLIVGSAIVNFYGKCGRLDEAREAFDRMPAK-NNVTWNGMIAAYVQSGAATQAMDLFAT 240
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI--TKTGLAFDVFVMNGLMDIYIKC 449
M + PD + + ++GAC + LE ++H + + L D V N L+ +Y +C
Sbjct: 241 MEDEGVVPDAMAVSSILGAC---SGLESGKRIHSAVIDRRQELQSDRAVCNALVHMYARC 297
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE---ALKLFTRMRSLGVSPNLVTLV 506
GSL AR +F + + + VSW+++I +AQ D+ A +LF M GV+P+ VT+
Sbjct: 298 GSLDDARLVFLAIPSKNTVSWTTIIAAFAQQENRDDIEAAFQLFREMDLDGVAPSEVTIF 357
Query: 507 GVLTACSHV--GLVEEGLHLYRIMEN--EYGIIPTREHCSCVVDLLARAGCVHEAED--F 560
L CS + G + G L+ M+ ++ + E + ++D+ A G + +AE F
Sbjct: 358 YALETCSKMDRGGLASGRALHTAMDTAGRVELLSSVEVLNSLLDMYASCGSLIDAEAIFF 417
Query: 561 INQMACDADIVVWKSLLAS 579
+ + + D+V W +++A+
Sbjct: 418 DHLLGKNVDVVSWTNMIAA 436
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 180/398 (45%), Gaps = 61/398 (15%)
Query: 41 LISACSSLRSLQLGRKVHDHIL--LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
++ ACS L S G+++H ++ + Q D + N +++MY +CGSL+DAR+ F +P
Sbjct: 256 ILGACSGLES---GKRIHSAVIDRRQELQSDRAVCNALVHMYARCGSLDDARLVFLAIPS 312
Query: 99 RNVVSWTAMIAGCSQNYQEND---AIKLYIQMLQSGVMPGQFTFGSIIKACSGL--GSVC 153
+N VSWT +IA +Q +D A +L+ +M GV P + T ++ CS + G +
Sbjct: 313 KNTVSWTTIIAAFAQQENRDDIEAAFQLFREMDLDGVAPSEVTIFYALETCSKMDRGGLA 372
Query: 154 LGRQLHAHVI---KSEHGSHLIAQNALIAMYTKFDRILDARNVFSG--IARK-DVTSWGS 207
GR LH + + E S + N+L+ MY ++DA +F + + DV SW +
Sbjct: 373 SGRALHTAMDTAGRVELLSSVEVLNSLLDMYASCGSLIDAEAIFFDHLLGKNVDVVSWTN 432
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------ 249
MIAA+ + G AL +M G + +E ++ AC+
Sbjct: 433 MIAAYVQHGQSSSALLLAKKMDLEGV-KSDEIAMSTILGACTAHQATSLGRELHRRAREL 491
Query: 250 -----------------NFARI-----LFNEI---DSPDLASWNALIAGVASHSNANEAM 284
++ R+ +F E+ +SP+ ++ A+IAG A +A+
Sbjct: 492 GYASNTIVGNALVFMYGSWGRVDDAARVFQELKNANSPNSNTFTAMIAGYARQGRTLQAL 551
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTM 343
SL++EM + P T S+ AC L + ++ +I G + ++ +
Sbjct: 552 SLYNEMNLHGVEPRDATFTSIFQACSHAGFLAKALEHFVFIYDFQGLEPTAEHFGCVVDL 611
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
+ + A + + D V+W S++A+C +Q
Sbjct: 612 LGRSGFVREAEELVLAMPYEPDIVAWRSLLASCGGSDQ 649
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 182/560 (32%), Positives = 308/560 (55%), Gaps = 44/560 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ AC + SL+ G VH + + +V + N I+ MYG+CG+L+DA FD++
Sbjct: 129 TFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEV 188
Query: 97 PQR---NVVSWTAMIAGCSQNYQENDAIKLYIQM---LQSGVMPGQFTFGSIIKACSGLG 150
+R ++VSW +++A Q Q A+++ +M + P T +I+ AC+ +
Sbjct: 189 LERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVF 248
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G+Q+H +++ + NAL++MY K ++ +A VF GI +KDV SW +M+
Sbjct: 249 ALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVT 308
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNAL 270
+S++G S SA S F +++ E D+ +W+A+
Sbjct: 309 GYSQIG--------------------------SFDSALSLF-KMMQEEDIKLDVITWSAV 341
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
IAG A + EA+ +F +M+ L P+ +T+ SLL C L G Q H+Y+IK
Sbjct: 342 IAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNIL 401
Query: 331 DSN-------VPVCNAILTMYAKCSVLCNALLVFKEL-GKNADSVSWNSIIAACLQHNQA 382
+ N + V N ++ MYAKC A +F + GK+ + V+W +I QH +A
Sbjct: 402 NLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEA 461
Query: 383 EELFRLFSRMLASQ--IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV-FVM 439
+ +LF+++ + +KP+ T + + ACA++ L + QLH Y + +V +V
Sbjct: 462 NDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVG 521
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
N L+D+Y K G + +AR +F+ M+ +VVSW+SL+ GY G G+EAL LF +M+ LG +
Sbjct: 522 NCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFA 581
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
+ +T + VL ACSH G+V++G+ + M +GI P EH +C+VDLL RAG ++EA +
Sbjct: 582 VDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAME 641
Query: 560 FINQMACDADIVVWKSLLAS 579
I M+ + VVW +LL++
Sbjct: 642 LIKNMSMEPTAVVWVALLSA 661
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 151/275 (54%), Gaps = 6/275 (2%)
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WNALI ++ + + +M+ LPD T +L AC +L G VH+ +
Sbjct: 95 WNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVC 154
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL--GKNADSVSWNSIIAACLQHNQAEE 384
G SNV +CN+I+ MY +C L +A +F E+ K D VSWNSI+AA +Q Q+
Sbjct: 155 ANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRT 214
Query: 385 LFRLFSRM---LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
R+ RM + +++PD IT +++ ACA + +L+ Q+H + + GL DVFV N
Sbjct: 215 ALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNA 274
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+ +Y KC + A K+F ++ DVVSW++++ GY+Q G D AL LF M+ + +
Sbjct: 275 LVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLD 334
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
++T V+ + G E L ++R M+ YG+ P
Sbjct: 335 VITWSAVIAGYAQKGHGFEALDVFRQMQ-LYGLEP 368
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 137/289 (47%), Gaps = 15/289 (5%)
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P + + SLL C TL H I GF + + + Y +C A+ +
Sbjct: 28 PPTIPLISLLRQC---KTLINAKLAHQQIFVHGF---TEMFSYAVGAYIECGASAEAVSL 81
Query: 357 FKELGKNADSV-SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+ L + +V WN++I ++ ++ + +M PDH TF V+ AC ++
Sbjct: 82 LQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIP 141
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN-FMENP--DVVSWSS 472
SL +H + GL +VF+ N ++ +Y +CG+L A ++F+ +E D+VSW+S
Sbjct: 142 SLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNS 201
Query: 473 LILGYAQFGCGDEALKLFTRM---RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
++ Y Q G AL++ RM SL + P+ +TLV +L AC+ V ++ G ++
Sbjct: 202 ILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSV 261
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G++ + +V + A+ ++EA + D+V W +++
Sbjct: 262 RN-GLVDDVFVGNALVSMYAKCSKMNEANKVFEGIK-KKDVVSWNAMVT 308
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
Query: 19 LVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV-LQNHIL 77
L A F Q T+++ T + + AC+ L L+LGR++H + L ++ + +V+ + N ++
Sbjct: 467 LFAQIFKQK-TSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLI 525
Query: 78 NMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQF 137
+MY K G ++ AR FD M RNVVSWT+++ G + + +A+ L+ QM + G
Sbjct: 526 DMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGI 585
Query: 138 TFGSIIKACSGLGSVCLG 155
TF ++ ACS G V G
Sbjct: 586 TFLVVLYACSHSGMVDQG 603
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/569 (32%), Positives = 292/569 (51%), Gaps = 43/569 (7%)
Query: 52 QLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM-PQRNVVSWTAMIAG 110
QLG +VH + + DV + N ++ MYG G ++DAR FD+ +RN VSW +++
Sbjct: 24 QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA 83
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
+N Q DAI+++ +M+ SG+ P +F F ++ AC+G ++ GRQ+HA V++ +
Sbjct: 84 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKD 143
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
+ NAL+ MY K R+ A +F + DV SW ++I+ G++ A+ +M
Sbjct: 144 VFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKS 203
Query: 231 HGAYQPNEFIFGSVFSACS----------------------------------------N 250
G PN F+ S+ AC+ +
Sbjct: 204 SGLV-PNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 262
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
A +F+ + DL WNALI+G + +EA S+F +R L + T+ ++L +
Sbjct: 263 DAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTA 322
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
QVH+ K+GF + V N ++ Y KCS L +A+ VF+E + D ++
Sbjct: 323 SLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEEC-SSGDIIAVT 381
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
S+I A Q + E +LF ML ++PD + ++ ACA +++ E Q+H ++ K
Sbjct: 382 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 441
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
D F N L+ Y KCGS+ A F+ + VVSWS++I G AQ G G AL+LF
Sbjct: 442 QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELF 501
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
RM G++PN +T+ VL AC+H GLV+E + M+ +GI T EH SC++DLL R
Sbjct: 502 GRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR 561
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
AG + +A + +N M A+ VW +LL +
Sbjct: 562 AGKLDDAMELVNSMPFQANASVWGALLGA 590
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 143/488 (29%), Positives = 230/488 (47%), Gaps = 50/488 (10%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+P+ + + +++AC+ R++ GR+VH ++ + DV N +++MY K G ++ A
Sbjct: 105 IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIAS 164
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ F+KMP +VVSW A+I+GC N ++ AI+L +QM SG++P F SI+KAC+G G
Sbjct: 165 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAG 224
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ LGRQ+H +IK+ S L+ MY K + DA VF ++ +D+ W ++I+
Sbjct: 225 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS 284
Query: 211 AFSKLGYELEALCHFNEMLHHG-------------------------------------- 232
S G EA F + G
Sbjct: 285 GCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIF 344
Query: 233 -AYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
A+ N I +C + A +F E S D+ + ++I ++ + A+ LF EM
Sbjct: 345 DAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEML 404
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ L PD + SLL AC QG QVH+++IK F S+ NA++ YAKC +
Sbjct: 405 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIE 464
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A L F L + VSW+++I QH + LF RM+ I P+HIT V+ AC
Sbjct: 465 DAELAFSSLPERG-VVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCAC 523
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNG----LMDIYIKCGSLGSARKLFNFME-NPD 466
+V + Y F + ++D+ + G L A +L N M +
Sbjct: 524 NHAG---LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQAN 580
Query: 467 VVSWSSLI 474
W +L+
Sbjct: 581 ASVWGALL 588
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 176/566 (31%), Positives = 301/566 (53%), Gaps = 44/566 (7%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++SAC+ + + G+++H +L + + N ++ +Y + G+L A F M QR+
Sbjct: 257 VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRD 316
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
VS+ ++I+G +Q N A+ L+ +M P T S++ AC+ +G++ G+Q H+
Sbjct: 317 RVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHS 376
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF---------------------SGIAR 199
+ IK+ S ++ + +L+ +Y K I A F GI
Sbjct: 377 YAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVP 436
Query: 200 KDVTSWGSMIAAFSKLG-YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---- 254
T + S++ + LG +L H ++L G +Q N ++ + + ++
Sbjct: 437 NQFT-YPSILKTCTTLGATDLGEQIH-TQVLKTG-FQFNVYVSSVLIDMYAKHGKLDHAL 493
Query: 255 -LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
+F + D+ SW A+IAG H EA++LF EM+D+ + D + S + AC G
Sbjct: 494 KIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQ 553
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
L QG Q+H+ G+ ++ + NA++++YA+C + A F ++ D+VSWNS++
Sbjct: 554 ALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAK-DNVSWNSLV 612
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
+ Q EE +F++M + ++ + TF + A A +A++ + Q+H I KTG
Sbjct: 613 SGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYD 672
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
+ V N L+ +Y KCG++ D +SW+S+I GY+Q GCG EALKLF M
Sbjct: 673 SETEVSNALITLYAKCGTI-------------DDISWNSMITGYSQHGCGFEALKLFEDM 719
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
+ L V PN VT VGVL+ACSHVGLV+EG+ +R M + ++P EH +CVVDLL R+G
Sbjct: 720 KQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGL 779
Query: 554 VHEAEDFINQMACDADIVVWKSLLAS 579
+ A+ F+ +M D +VW++LL++
Sbjct: 780 LSRAKRFVEEMPIQPDAMVWRTLLSA 805
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 147/553 (26%), Positives = 268/553 (48%), Gaps = 43/553 (7%)
Query: 30 NIRIRPSTYAGLISACS-SLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
N+ +A ++ CS + S + ++H + S + + N ++++Y K G L
Sbjct: 158 NVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSS 217
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A+ F+ + R+ VSW AMI+G SQN E +A+ L+ Q+ ++ AC+
Sbjct: 218 AKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTK 263
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+ G+QLH V+K S NAL+ +Y++ + A +F ++++D S+ S+
Sbjct: 264 VEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSL 323
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------- 251
I+ ++ GY AL F +M + +P+ S+ SAC++
Sbjct: 324 ISGLAQQGYINRALALFKKM-NLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAG 382
Query: 252 --------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
+L + D+ + + N N++ +F++M+ ++P+ T
Sbjct: 383 MTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYP 442
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
S+L C G Q+H+ ++K GF NV V + ++ MYAK L +AL +F+ L +N
Sbjct: 443 SILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKEN 502
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
D VSW ++IA QH++ E LF M IK D+I F + ACA + +L+ Q+
Sbjct: 503 -DVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQI 561
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H +G + D+ + N L+ +Y +CG + A F+ + D VSW+SL+ G+AQ G
Sbjct: 562 HAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYF 621
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
+EAL +F +M G+ N T ++A +++ V G ++ ++ + G E +
Sbjct: 622 EEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIR-KTGYDSETEVSNA 680
Query: 544 VVDLLARAGCVHE 556
++ L A+ G + +
Sbjct: 681 LITLYAKCGTIDD 693
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 143/519 (27%), Positives = 235/519 (45%), Gaps = 83/519 (15%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N +S L +Q N AL F + N + + +P T A L+SAC+S+ +L G++ H +
Sbjct: 321 NSLISGLAQQGYINRALAL--FKKMNLDCQ-KPDCVTVASLLSACASVGALPNGKQFHSY 377
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ + D+V++ +L++Y KC ++ A F + G N N +
Sbjct: 378 AIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF-------------LCYGQLDNL--NKS 422
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+++ QM G++P QFT+ SI+K C+ LG+ LG Q+H V+K+ ++ + LI M
Sbjct: 423 FQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDM 482
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K ++ A +F + DV SW +MIA +++ EAL F EM G N
Sbjct: 483 YAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDN-IG 541
Query: 241 FGSVFSACSN--------------------------------FAR--------ILFNEID 260
F S SAC+ +AR F++I
Sbjct: 542 FASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIY 601
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ D SWN+L++G A EA+++F++M L + T S + A + G Q
Sbjct: 602 AKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQ 661
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H I K G+DS V NA++T+YAKC + D +SWNS+I QH
Sbjct: 662 IHGMIRKTGYDSETEVSNALITLYAKCGTI--------------DDISWNSMITGYSQHG 707
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
E +LF M + P+H+TF V+ AC+ + +V + Y A ++
Sbjct: 708 CGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVG---LVDEGISYFRSMSEAHNLVPKP 764
Query: 441 G----LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + G L A++ M PD + W +L+
Sbjct: 765 EHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLL 803
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 190/378 (50%), Gaps = 35/378 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY ++ C++L + LG ++H +L + Q +V + + +++MY K G L+ A F ++
Sbjct: 440 TYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRL 499
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ +VVSWTAMIAG +Q+ + +A+ L+ +M G+ F S I AC+G+ ++ GR
Sbjct: 500 KENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGR 559
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+HA S + L NAL+++Y + ++ +A F I KD SW S+++ F++ G
Sbjct: 560 QIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSG 619
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
Y EAL F +M + + N F FGS SA +N A +
Sbjct: 620 YFEEALNIFAQM-NKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVS 678
Query: 255 -----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
L+ + + D SWN++I G + H EA+ LF +M+ ++LP+ +T +L AC
Sbjct: 679 NALITLYAKCGTIDDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSAC 738
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSN-VPVCN---AILTMYAKCSVLCNALLVFKELGKNAD 365
+ +G+ SY M N VP ++ + + +L A +E+ D
Sbjct: 739 SHVGLVDEGI---SYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPD 795
Query: 366 SVSWNSIIAACLQHNQAE 383
++ W ++++AC H +
Sbjct: 796 AMVWRTLLSACNVHKNID 813
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 159/328 (48%), Gaps = 34/328 (10%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
A+ +F + + D SW A+I+G++ + EAM LF ++ +L AC
Sbjct: 218 AKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTK 263
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
G Q+H ++K GF S VCNA++T+Y++ L +A +F + + D VS+NS
Sbjct: 264 VEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQR-DRVSYNS 322
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+I+ Q LF +M KPD +T ++ ACA + +L Q H Y K G
Sbjct: 323 LISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAG 382
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
+ D+ V L+D+Y+KC + +A + F L Y Q +++ ++FT
Sbjct: 383 MTSDIVVEGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFT 427
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLAR 550
+M+ G+ PN T +L C+ +G + G ++ ++++ G S ++D+ A+
Sbjct: 428 QMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKT--GFQFNVYVSSVLIDMYAK 485
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLA 578
G + A ++ + D+V W +++A
Sbjct: 486 HGKLDHALKIFRRLK-ENDVVSWTAMIA 512
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 124/275 (45%), Gaps = 37/275 (13%)
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
LL C+ + Y G+++ + + G D N A+ VF E+ +
Sbjct: 87 LLEGCLNSRSFYDGLKLIDFYLAFG-DLNC------------------AVNVFDEMPIRS 127
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA-SLEMVTQL 423
S WN I + + LF RML ++ D F V+ C+ A S V Q+
Sbjct: 128 LSC-WNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQI 186
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H +G F+ N L+D+Y K G L SA+K+F ++ D VSW ++I G +Q G
Sbjct: 187 HAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYE 246
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
+EA+ LF ++ VL+AC+ V E G L+ ++ + G C+
Sbjct: 247 EEAMLLFCQI--------------VLSACTKVEFFEFGKQLHGLVLKQ-GFSSETYVCNA 291
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+V L +R+G + AE + M+ D V + SL++
Sbjct: 292 LVTLYSRSGNLSSAEQIFHCMS-QRDRVSYNSLIS 325
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 186/565 (32%), Positives = 291/565 (51%), Gaps = 44/565 (7%)
Query: 58 HDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQE 117
H ++L D+ L N ++N+Y + G AR FD+MP RN V+W +I+G +QN
Sbjct: 23 HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKAC-SGLGSVCLGRQLHAHVIKSE-HGSHLIAQN 175
DA + +M+ G +P +F FGS I+AC + GRQ+H + I++ + + + N
Sbjct: 83 EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
LI MY K I AR+VF + KD SW SMI + +A+ +N M G
Sbjct: 143 GLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTG-LM 201
Query: 236 PNEFIFGSVFSACSNFARIL---------------------------------------- 255
P+ F S S+C++ IL
Sbjct: 202 PSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKV 261
Query: 256 FNEIDSPDLASWNALIAGVA-SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
F+ + D SWN +I +A S ++ +EA+ +F EM P+ +T +LL T
Sbjct: 262 FSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLST 321
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
Q+H+ I+K + + NA+L Y K + N +F + + D VSWNS+I+
Sbjct: 322 SKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMIS 381
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
+ + + L M+ + D TF V+ ACA +A+LE ++H + L
Sbjct: 382 GYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLES 441
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
DV + + L+D+Y KCG + A + FN M ++ SW+S+I GYA+ G GD AL+LFTRM+
Sbjct: 442 DVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMK 501
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCV 554
G P+ +T VGVL+ACSH+GLV+EG ++ M YG++P EH SC+VDLL RAG +
Sbjct: 502 LSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGEL 561
Query: 555 HEAEDFINQMACDADIVVWKSLLAS 579
+ E+FIN+M +I++W+++L +
Sbjct: 562 DKIENFINKMPIKPNILIWRTVLGA 586
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 138/483 (28%), Positives = 225/483 (46%), Gaps = 48/483 (9%)
Query: 38 YAGLISAC-SSLRSLQLGRKVHDHILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+ I AC S+ + GR+VH + + + V + N ++NMY KCG ++ AR F
Sbjct: 104 FGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGL 163
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M ++ VSW +MI G QN DA+K Y M ++G+MP F S + +C+ LG + LG
Sbjct: 164 MVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLG 223
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+Q H IK + N L+A+Y + R+ + + VFS + +D SW ++I A +
Sbjct: 224 QQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADS 283
Query: 216 GYEL-EALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------- 249
G + EA+ F EM+ G + PN F ++ + S
Sbjct: 284 GASVSEAIEVFLEMMRAG-WSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNA 342
Query: 250 ----------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
N I + D SWN++I+G + +AM L M R
Sbjct: 343 IENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQR 402
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
D T ++L AC TL GM+VH+ I+ +S+V + +A++ MY+KC + A
Sbjct: 403 GQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYA 462
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
F L + SWNS+I+ +H + RLF+RM S PDHITF V+ AC+
Sbjct: 463 SRFFN-LMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSH 521
Query: 414 MASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWS 471
+ ++ + +T+ GL V + ++D+ + G L N M P+++ W
Sbjct: 522 IGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWR 581
Query: 472 SLI 474
+++
Sbjct: 582 TVL 584
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 118/219 (53%), Gaps = 2/219 (0%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L++ SSL + +L ++H IL + D ++N +L YGK G +E+ F +M
Sbjct: 308 TFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRM 367
Query: 97 PQ-RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ R+ VSW +MI+G N A+ L M+Q G FTF +++ AC+ + ++ G
Sbjct: 368 SERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECG 427
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
++HA I++ S ++ +AL+ MY+K RI A F+ + +++ SW SMI+ +++
Sbjct: 428 MEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARH 487
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
G+ AL F M G P+ F V SACS+ +
Sbjct: 488 GHGDNALRLFTRMKLSGQL-PDHITFVGVLSACSHIGLV 525
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/569 (32%), Positives = 292/569 (51%), Gaps = 43/569 (7%)
Query: 52 QLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM-PQRNVVSWTAMIAG 110
QLG +VH + + DV + N ++ MYG G ++DAR FD+ +RN VSW +++
Sbjct: 117 QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA 176
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
+N Q DAI+++ +M+ SG+ P +F F ++ AC+G ++ GRQ+HA V++ +
Sbjct: 177 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKD 236
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
+ NAL+ MY K R+ A +F + DV SW ++I+ G++ A+ +M
Sbjct: 237 VFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKS 296
Query: 231 HGAYQPNEFIFGSVFSACS----------------------------------------N 250
G PN F+ S+ AC+ +
Sbjct: 297 SGLV-PNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 355
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
A +F+ + DL WNALI+G + +EA S+F +R L + T+ ++L +
Sbjct: 356 DAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTA 415
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
QVH+ K+GF + V N ++ Y KCS L +A+ VF+E + D ++
Sbjct: 416 SLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEEC-SSGDIIAVT 474
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
S+I A Q + E +LF ML ++PD + ++ ACA +++ E Q+H ++ K
Sbjct: 475 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
D F N L+ Y KCGS+ A F+ + VVSWS++I G AQ G G AL+LF
Sbjct: 535 QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELF 594
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
RM G++PN +T+ VL AC+H GLV+E + M+ +GI T EH SC++DLL R
Sbjct: 595 GRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR 654
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
AG + +A + +N M A+ VW +LL +
Sbjct: 655 AGKLDDAMELVNSMPFQANASVWGALLGA 683
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/495 (28%), Positives = 238/495 (48%), Gaps = 46/495 (9%)
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
L+NH+++ Y KC AR FD++P VSW++++ S N AI+ + M G
Sbjct: 39 LRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG 98
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
V +F ++K + LG Q+HA + + GS + NAL+AMY F + DAR
Sbjct: 99 VCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDAR 155
Query: 192 NVFSGI-ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS- 249
VF + ++ SW +++A+ K +A+ F EM+ G QP EF F V +AC+
Sbjct: 156 RVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG-IQPTEFGFSCVVNACTG 214
Query: 250 ---------------------------------------NFARILFNEIDSPDLASWNAL 270
+ A ++F ++ D+ SWNAL
Sbjct: 215 SRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNAL 274
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I+G + + + A+ L +M+ L+P+ + S+L AC G G Q+H ++IK
Sbjct: 275 ISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANA 334
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
DS+ + ++ MYAK L +A+ VF + + D + WN++I+ C + +E F +F
Sbjct: 335 DSDDYIGVGLVDMYAKNHFLDDAMKVFDWM-SHRDLILWNALISGCSHGGRHDEAFSIFY 393
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
+ + + T V+ + A + + Q+H K G FD V+NGL+D Y KC
Sbjct: 394 GLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCS 453
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
L A ++F + D+++ +S+I +Q G+ A+KLF M G+ P+ L +L
Sbjct: 454 CLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLN 513
Query: 511 ACSHVGLVEEGLHLY 525
AC+ + E+G ++
Sbjct: 514 ACASLSAYEQGKQVH 528
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 143/488 (29%), Positives = 230/488 (47%), Gaps = 50/488 (10%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+P+ + + +++AC+ R++ GR+VH ++ + DV N +++MY K G ++ A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIAS 257
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ F+KMP +VVSW A+I+GC N ++ AI+L +QM SG++P F SI+KAC+G G
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAG 317
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ LGRQ+H +IK+ S L+ MY K + DA VF ++ +D+ W ++I+
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS 377
Query: 211 AFSKLGYELEALCHFNEMLHHG-------------------------------------- 232
S G EA F + G
Sbjct: 378 GCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIF 437
Query: 233 -AYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
A+ N I +C + A +F E S D+ + ++I ++ + A+ LF EM
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEML 497
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ L PD + SLL AC QG QVH+++IK F S+ NA++ YAKC +
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIE 557
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A L F L + VSW+++I QH + LF RM+ I P+HIT V+ AC
Sbjct: 558 DAELAFSSLPERG-VVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCAC 616
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNG----LMDIYIKCGSLGSARKLFNFME-NPD 466
+V + Y F + ++D+ + G L A +L N M +
Sbjct: 617 NHAG---LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQAN 673
Query: 467 VVSWSSLI 474
W +L+
Sbjct: 674 ASVWGALL 681
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 178/345 (51%), Gaps = 21/345 (6%)
Query: 243 SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
S +S C AR +F+EI P SW++L+ +++ A+ F MR + +
Sbjct: 45 SFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEF 104
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
+ +L C+ L G QVH+ + GF S+V V NA++ MY + +A VF E
Sbjct: 105 ALPVVL-KCVPDAQL--GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEA 161
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
G ++VSWN +++A ++++Q + ++F M+ S I+P F+ V+ AC +++
Sbjct: 162 GSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAG 221
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
Q+H + + G DVF N L+D+Y+K G + A +F M + DVVSW++LI G
Sbjct: 222 RQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLN 281
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM-------ENEYG 533
G A++L +M+S G+ PN+ L +L AC+ G + G ++ M ++ G
Sbjct: 282 GHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIG 341
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +VD+ A+ + +A + M+ D+++W +L++
Sbjct: 342 V--------GLVDMYAKNHFLDDAMKVFDWMS-HRDLILWNALIS 377
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
LH + K+G F + N L+ Y KC AR++F+ + +P VSWSSL+ Y+
Sbjct: 24 AHLHANLLKSG--FLASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNN 81
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
G A++ F MR+ GV N L VL
Sbjct: 82 GLPRSAIQAFHGMRAEGVCCNEFALPVVL 110
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 194/615 (31%), Positives = 309/615 (50%), Gaps = 60/615 (9%)
Query: 23 DFSQN--NTNIRIRPSTYAGLIS---ACSSL-------RSLQLGRKVHDHILLSKC--QP 68
DF N N+N S LI+ C SL RSL + +H H + S P
Sbjct: 55 DFRNNLSNSNTTKALSKSKSLIANVHRCDSLLCHYAATRSLNKTKILHGHTITSGLLHSP 114
Query: 69 DVV-LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
+ + L +H+ Y CG + AR FD + ++ W A+I DA++++ M
Sbjct: 115 NFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSM 174
Query: 128 LQSG-VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
+ SG P ++TF +IKACS + + +G +H + S S++ QN+L+AMY +
Sbjct: 175 ICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGK 234
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+ AR VF+ + ++ V SW +MI+ + + G EAL FN M+ +P+ S
Sbjct: 235 VGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMM-DARVEPDSATIVSALP 293
Query: 247 ACSNF----------------------------------------ARILFNEIDSPDLAS 266
+C + A ++F E D+ +
Sbjct: 294 SCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVIT 353
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
W ++I G + NA A++L M+ ++P+ +T+ SLL AC L QG +H++++
Sbjct: 354 WTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVM 413
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+ DS+V V A++ MYAKC+ + + VF + +V WN++++ + + A E
Sbjct: 414 RKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMK-RTVPWNALLSGLIHNELAREAV 472
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
LF ML +++ +H TFN V+ A A +A L+ V LH Y+ ++G + V+ GL+D+Y
Sbjct: 473 GLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMY 532
Query: 447 IKCGSLGSARKLFNFMEN--PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
KCGSL A K+F+ + N D++ WS LI GY G G+ A+ LF +M G+ PN +T
Sbjct: 533 SKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEIT 592
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
VL ACSH GLV++GL L++ M Y P H +CVVDLL RAG + EA D I M
Sbjct: 593 FTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSM 652
Query: 565 ACDADIVVWKSLLAS 579
+ +W +LL +
Sbjct: 653 PFQQNHSIWGALLGA 667
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 195/438 (44%), Gaps = 56/438 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + EAL ++ S + + +T + +C L+ L+LG KVH +
Sbjct: 254 NTMISGWFQNGRPEEALAVFN-SMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQ 312
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ Q + ++N +++MY +CG +++A + F + +++V++WT+MI G N A+
Sbjct: 313 KNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALA 372
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L M GV+P T S++ AC+ L + G+ LHA V++ + S ++ ALI MY
Sbjct: 373 LCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYA 432
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + + + VF+ + K W ++++ EA+ F ML + N F
Sbjct: 433 KCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIE-EVEANHATFN 491
Query: 243 SV--------------------------------------FSACS--NFARILFNEIDS- 261
SV +S C ++A +F+EI +
Sbjct: 492 SVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNK 551
Query: 262 -PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D+ W+ LIAG H + A+ LF++M + P+ +T S+L AC R + G+
Sbjct: 552 EKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLT 611
Query: 321 VHSYIIKMGFDSNVP---VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
+ Y+I+ S +P C ++ + + L A + K + + W +++ ACL
Sbjct: 612 LFKYMIENYPSSPLPNHYTC--VVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACL 669
Query: 378 QHNQ-------AEELFRL 388
H AE LF L
Sbjct: 670 IHQNVELGEVAAERLFEL 687
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 184/592 (31%), Positives = 311/592 (52%), Gaps = 44/592 (7%)
Query: 29 TNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
+ I + T+ ++ AC L+ + G +VH + V + N I+ MY KC L
Sbjct: 174 SGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNG 233
Query: 89 ARMGFDKMPQR-NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
AR FD+MP++ +VVSW +MI+ S N Q +A++L+ +M ++ + P +TF + ++AC
Sbjct: 234 ARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACE 293
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
+ G +HA V+KS + ++ NALIAMY +F ++ +A N+F + D SW S
Sbjct: 294 DSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNS 353
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA-------------------- 247
M++ F + G EAL ++EM G +P+ S+ +A
Sbjct: 354 MLSGFVQNGLYHEALQFYHEMRDAGQ-KPDLVAVISIIAASARSGNTLHGMQIHAYAMKN 412
Query: 248 -------------------CS-NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
CS + +F+++ D+ SW +IAG A + + + A+ LF
Sbjct: 413 GLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELF 472
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
E++ + D + + S+L AC G + ++HSYII+ G S++ + N I+ +Y +C
Sbjct: 473 REVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGEC 531
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
+ A +F EL + D VSW S+I+ + + A E LF M + ++PD I+ +
Sbjct: 532 GNVDYAARMF-ELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSI 590
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
+ A A +++L+ ++H ++ + G + + + L+D+Y +CG+L +R +FNF+ N D+
Sbjct: 591 LSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDL 650
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
V W+S+I Y GCG A+ LF RM ++P+ + V VL ACSH GL+ EG
Sbjct: 651 VLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLES 710
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M+ EY + P EH +C+VDLL RA + EA F+ M + VW +LL +
Sbjct: 711 MKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGA 762
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 183/616 (29%), Positives = 314/616 (50%), Gaps = 49/616 (7%)
Query: 6 VSSLCKQNLYNEALVAYD--FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILL 63
+ +CK+ NEA + F+ + + Y+ ++ C S ++L G++VH H++
Sbjct: 47 LREICKRGSVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMIT 106
Query: 64 SKCQPD-VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S + V L ++ MYGKCG L DA FD MP + + +W AMI N + +++
Sbjct: 107 SNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLE 166
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
LY +M SG+ TF I+KAC L G ++H IK + S + N+++ MYT
Sbjct: 167 LYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYT 226
Query: 183 KFDRILDARNVFSGIARK-DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K + + AR +F + K DV SW SMI+A+S G +EAL F EM + PN + F
Sbjct: 227 KCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEM-QKASLAPNTYTF 285
Query: 242 GSVFSACSN--------------------------------FARI--------LFNEIDS 261
+ AC + +AR +F +D
Sbjct: 286 VAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDD 345
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
D SWN++++G + +EA+ + EMRD PD + V S++ A GMQ+
Sbjct: 346 WDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQI 405
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H+Y +K G DS++ V N+++ MYAK + +F ++ + D VSW +IIA Q+
Sbjct: 406 HAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKM-PDKDVVSWTTIIAGHAQNGS 464
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
LF + I D + + ++ AC+ + + V ++H YI + GL+ D+ + NG
Sbjct: 465 HSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNG 523
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
++D+Y +CG++ A ++F +E DVVSW+S+I Y G +EAL+LF M+ GV P+
Sbjct: 524 IVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPD 583
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
++LV +L+A + + +++G ++ + + G + S +VD+ AR G + ++ +
Sbjct: 584 SISLVSILSAAASLSALKKGKEIHGFLIRK-GFVLEGSLASTLVDMYARCGTLEKSRNVF 642
Query: 562 NQMACDADIVVWKSLL 577
N + + D+V+W S++
Sbjct: 643 NFIR-NKDLVLWTSMI 657
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 183/548 (33%), Positives = 284/548 (51%), Gaps = 40/548 (7%)
Query: 35 PST--YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
P T Y ++ A + ++S R+V D I QP++ N++L Y K G + +
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRI----PQPNLFSWNNLLLAYSKAGLISEMEST 94
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGLGS 151
F+K+P R+ V+W +I G S + A+K Y M++ + T +++K S G
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
V LG+Q+H VIK S+L+ + L+ MY I DA+ VF G+ ++ + S++
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALI 271
G +AL F M D SW A+I
Sbjct: 215 LLACGMIEDALQLFRGM--------------------------------EKDSVSWAAMI 242
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
G+A + A EA+ F EM+ + L D S+L AC G + +G Q+H+ II+ F
Sbjct: 243 KGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ 302
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
++ V +A++ MY KC L A VF + K + VSW +++ Q +AEE ++F
Sbjct: 303 DHIYVGSALIDMYCKCKCLHYAKTVFDRM-KQKNVVSWTAMVVGYGQTGRAEEAVKIFLD 361
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M S I PDH T + ACA ++SLE +Q H +GL V V N L+ +Y KCG
Sbjct: 362 MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGD 421
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+ + +LFN M D VSW++++ YAQFG E ++LF +M G+ P+ VTL GV++A
Sbjct: 422 IDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISA 481
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
CS GLVE+G +++M +EYGI+P+ H SC++DL +R+G + EA FIN M D +
Sbjct: 482 CSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAI 541
Query: 572 VWKSLLAS 579
W +LL++
Sbjct: 542 GWTTLLSA 549
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/544 (24%), Positives = 231/544 (42%), Gaps = 109/544 (20%)
Query: 38 YAGLISACSSLRSLQLGRKV---HDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
Y+ I C L + R V H +I+ + P+ L N+I++ Y S AR FD
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 95 KMPQRNV-------------------------------VSWTAMIAGCSQNYQENDAIKL 123
++PQ N+ V+W +I G S + A+K
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 124 YIQMLQS-GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
Y M++ + T +++K S G V LG+Q+H VIK S+L+ + L+ MY
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 183 KFDRILDARNVFSGI------------------------------ARKDVTSWGSMIAAF 212
I DA+ VF G+ KD SW +MI
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGL 245
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS----------------------- 249
++ G EA+ F EM G + +++ FGSV AC
Sbjct: 246 AQNGLAKEAIECFREMKVQG-LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDH 304
Query: 250 -----------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
++A+ +F+ + ++ SW A++ G A EA+ +F +M+
Sbjct: 305 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ PD T+ + AC +L +G Q H I G V V N+++T+Y KC + +
Sbjct: 365 SGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDD 424
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
+ +F E+ D+VSW ++++A Q +A E +LF +M+ +KPD +T V+ AC+
Sbjct: 425 STRLFNEMNVR-DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS 483
Query: 413 KMASLEMVTQLHCYIT-KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSW 470
+ +E + +T + G+ + + ++D++ + G L A + N M PD + W
Sbjct: 484 RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGW 543
Query: 471 SSLI 474
++L+
Sbjct: 544 TTLL 547
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 173/347 (49%), Gaps = 17/347 (4%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+ L + L EA+ + +++ + ++ AC L ++ G+++H I+ +
Sbjct: 242 IKGLAQNGLAKEAIECFR-EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN 300
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
Q + + + +++MY KC L A+ FD+M Q+NVVSWTAM+ G Q + +A+K+++
Sbjct: 301 FQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFL 360
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M +SG+ P +T G I AC+ + S+ G Q H I S ++ N+L+ +Y K
Sbjct: 361 DMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCG 420
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I D+ +F+ + +D SW +M++A+++ G +E + F++M+ HG +P+ V
Sbjct: 421 DIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG-LKPDGVTLTGVI 479
Query: 246 SACS---------NFARILFNEID-SPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
SACS + +++ +E P + ++ +I + EAM + M
Sbjct: 480 SACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM---PF 536
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
PD + +LL AC + L G +I++ D + P +L+
Sbjct: 537 PPDAIGWTTLLSACRNKGNLEIGKWAAESLIEL--DPHHPAGYTLLS 581
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 191/433 (44%), Gaps = 79/433 (18%)
Query: 23 DFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGK 82
DFS N T + T ++ SS + LG+++H ++ + +++ + +L MY
Sbjct: 132 DFSANLTRV-----TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYAN 186
Query: 83 CGSLEDARMGFDKMPQRNVV------------------------------SWTAMIAGCS 112
G + DA+ F + RN V SW AMI G +
Sbjct: 187 VGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLA 246
Query: 113 QNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
QN +AI+ + +M G+ Q+ FGS++ AC GLG++ G+Q+HA +I++ H+
Sbjct: 247 QNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIY 306
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
+ALI MY K + A+ VF + +K+V SW +M+ + + G EA+ F +M G
Sbjct: 307 VGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG 366
Query: 233 AYQPNEFIFGSVFSACSNFARI-------------------------------------- 254
P+ + G SAC+N + +
Sbjct: 367 I-DPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDS 425
Query: 255 --LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
LFNE++ D SW A+++ A A E + LF +M L PDG+T+ ++ AC R
Sbjct: 426 TRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISAC-SR 484
Query: 313 LTLYQGMQVHSYII--KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
L + Q + ++ + G ++ + ++ ++++ L A+ + D++ W
Sbjct: 485 AGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWT 544
Query: 371 SIIAACLQHNQAE 383
++++AC E
Sbjct: 545 TLLSACRNKGNLE 557
>gi|302763107|ref|XP_002964975.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
gi|300167208|gb|EFJ33813.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
Length = 703
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 198/623 (31%), Positives = 319/623 (51%), Gaps = 50/623 (8%)
Query: 1 FSNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDH 60
FS +++ + +N + + S ++ I+ +T + ++ ACSSLR L+ G+K+H
Sbjct: 53 FSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSR 112
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
L +++QN +++MY +C L+ AR+ FDK+ ++VVSW AMIA C++ + A
Sbjct: 113 ALARGLSSSIIVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQA 172
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGS-VCLGRQLHAHVIKSEHGSHLIAQNALIA 179
++L+ +M + P + TF S+ ACS L +G+++H + S +++ A++
Sbjct: 173 LQLFKRM---ELEPNEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVT 229
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM----------- 228
MY KF ++ AR VF+GI K+V SW +M+ A+++ + EAL ++EM
Sbjct: 230 MYGKFGKVGMARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVT 289
Query: 229 -------------------LH-----HGAYQPN---EFIFGSVFSACSNF--ARILFNEI 259
LH HG Y N + S++ C+ AR +F+++
Sbjct: 290 VVIALGISASLRLLKLGIELHELSVAHG-YDSNIKVQNALISMYGKCNELDAARRVFSKV 348
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
+ D+ SW ALI H EA+ L+ +M + PD +T S+L AC L G
Sbjct: 349 RAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQ 408
Query: 320 QVHSYII--KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
+H+ ++ K GF V V A++ MY KC L + +F+ V WN++I A
Sbjct: 409 ALHARLLARKDGFSDGVLVA-ALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYE 467
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDV 436
Q + L+ M + PD T + ++ ACA++ LE QLH I + + +
Sbjct: 468 QEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELQDLEKGEQLHVEIIASRDCSQNP 527
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
V+N L+ +Y CG + A+ +F M+N DVVSW+ LI Y Q G AL+L+ RM
Sbjct: 528 VVLNALISMYASCGEIREAKAVFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVE 587
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
GV P T + V AC H GLV+E ++ M E I PT +H SCVV +L+RAG + E
Sbjct: 588 GVQPTEPTFLCVFLACGHAGLVDECKWYFQSM-IEDRITPTFDHYSCVVTVLSRAGKLEE 646
Query: 557 AEDFINQMACDADIVVWKSLLAS 579
AED ++ M + V W SLL +
Sbjct: 647 AEDLLHSMPFNPGSVGWTSLLGA 669
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 178/580 (30%), Positives = 296/580 (51%), Gaps = 63/580 (10%)
Query: 50 SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIA 109
+L GR++H HI+ S D L +H+L MYGKCGS++DA F +P+R++ SW +IA
Sbjct: 1 ALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIA 60
Query: 110 GCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGS 169
++N AI+++ M +G+ P T S++ ACS L + G+++H+ + S
Sbjct: 61 AFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSS 120
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
+I QNAL++MY + R+ AR VF I K V SW +MIAA ++ G +AL F M
Sbjct: 121 SIIVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRM- 179
Query: 230 HHGAYQPNEFIFGSVFSACS---------------------------------------- 249
+PNE F SVF+ACS
Sbjct: 180 ---ELEPNEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGK 236
Query: 250 -NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCA 308
AR +FN I ++ SWNA++ ++ EA+ ++ EM +++ D +TV L
Sbjct: 237 VGMARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGI 296
Query: 309 CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS 368
L G+++H + G+DSN+ V NA+++MY KC+ L A VF ++ + D VS
Sbjct: 297 SASLRLLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKV-RAHDVVS 355
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
W ++I A QH + E L+ +M ++PD +TF V+ AC+ + LE+ LH +
Sbjct: 356 WTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLL 415
Query: 429 KTGLAF-DVFVMNGLMDIYIKCGSLGSARKLFNFMENPD-VVSWSSLILGYAQFGCGDEA 486
F D ++ L+++Y+KCG L + ++F ++ VV W+++I Y Q G A
Sbjct: 416 ARKDGFSDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAA 475
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCS---- 542
+ L+ M+ G+ P+ TL +L+AC+ + +E+G L+ II +R+ CS
Sbjct: 476 VDLYDMMKQRGLDPDESTLSSILSACAELQDLEKGEQLH------VEIIASRD-CSQNPV 528
Query: 543 ---CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++ + A G + EA+ +M + D+V W L+++
Sbjct: 529 VLNALISMYASCGEIREAKAVFKRMK-NRDVVSWTILISA 567
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 191/428 (44%), Gaps = 45/428 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + + + NL EAL Y ++ T + +SLR L+LG ++H+ +
Sbjct: 256 NAMLGAYTQNNLDREALEVY-HEMVAQKVQRDEVTVVIALGISASLRLLKLGIELHELSV 314
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ +QN +++MYGKC L+ AR F K+ +VVSWTA+I +Q+ + +A++
Sbjct: 315 AHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALE 374
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG-SHLIAQNALIAMY 181
LY QM G+ P + TF S++ ACS + LG+ LHA ++ + G S + ALI MY
Sbjct: 375 LYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARKDGFSDGVLVAALINMY 434
Query: 182 TKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
K R+ + +F K V W +MI A+ + GY A+ ++ M G P+E
Sbjct: 435 VKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRG-LDPDEST 493
Query: 241 FGSVFSACSNFARILFNE------IDSPDLAS----WNALIAGVASHSNANEAMSLFSEM 290
S+ SAC+ + E I S D + NALI+ AS EA ++F M
Sbjct: 494 LSSILSACAELQDLEKGEQLHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRM 553
Query: 291 RDRE--------------------------LLPDGLTVHSLLCACIGRLTLYQGM--QVH 322
++R+ +L +G+ C+ + G+ +
Sbjct: 554 KNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEPTFLCVFLACGHAGLVDECK 613
Query: 323 SYIIKMGFDSNVPVCN---AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
Y M D P + ++T+ ++ L A + + N SV W S++ AC H
Sbjct: 614 WYFQSMIEDRITPTFDHYSCVVTVLSRAGKLEEAEDLLHSMPFNPGSVGWTSLLGACRTH 673
Query: 380 NQAEELFR 387
+ R
Sbjct: 674 GDLKRARR 681
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 189/623 (30%), Positives = 320/623 (51%), Gaps = 47/623 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +SS + LY+E L + + T++ TY +I AC+ + + +G VH ++
Sbjct: 155 NAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVV 214
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ DV + N +++ YG G + DA FD MP+RN+VSW +MI S N ++
Sbjct: 215 KTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFL 274
Query: 123 LYIQMLQS----GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
L +M++ MP T +++ C+ + LG+ +H +K L+ NAL+
Sbjct: 275 LLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALM 334
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML--------- 229
MY+K I +A+ +F K+V SW +M+ FS G +ML
Sbjct: 335 DMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKAD 394
Query: 230 -----------HHGAYQPN-----------EFIFGSV--------FSACSN--FARILFN 257
H ++ P+ EF++ + ++ C + +A+ +F+
Sbjct: 395 EVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFH 454
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
I S + SWNALI G A ++ ++ +M+ LLPD TV SLL AC +L
Sbjct: 455 GIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRL 514
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G +VH +II+ + ++ V ++L++Y C LC +F + ++ VSWN++I L
Sbjct: 515 GKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM-EDKSLVSWNTVITGYL 573
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
Q+ + +F +M+ I+ I+ V GAC+ + SL + + H Y K L D F
Sbjct: 574 QNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAF 633
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
+ L+D+Y K GS+ + K+FN ++ SW+++I+GY G EA+KLF M+ G
Sbjct: 634 IACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTG 693
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
+P+ +T +GVLTAC+H GL+ EGL M++ +G+ P +H +CV+D+L RAG + +A
Sbjct: 694 HNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKA 753
Query: 558 EDFI-NQMACDADIVVWKSLLAS 579
+ +M+ +AD+ +WKSLL+S
Sbjct: 754 LRVVAEEMSEEADVGIWKSLLSS 776
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 157/614 (25%), Positives = 291/614 (47%), Gaps = 63/614 (10%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLS-KCQPDVVLQNH 75
+ V D S ++ + +R + L+ A + +++GRK+H + S + + D VL
Sbjct: 67 QEFVGDDESSSDAFLLVREA-LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTR 125
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMP 134
I+ MY CGS +D+R FD + +N+ W A+I+ S+N ++ ++ +I+M+ + ++P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
FT+ +IKAC+G+ V +G +H V+K+ + NAL++ Y + DA +F
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH---GAYQPNEFIFGSVFSACSNF 251
+ +++ SW SMI FS G+ E+ EM+ GA+ P+ +V C+
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 252 ----------------------------------------ARILFNEIDSPDLASWNALI 271
A+++F ++ ++ SWN ++
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 272 AGVASHSNANEAMSLFSEM--RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
G ++ + + + +M ++ D +T+ + + C L ++H Y +K
Sbjct: 366 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 425
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV-SWNSIIAACLQHNQAEELFRL 388
F N V NA + YAKC L A VF G + +V SWN++I Q N
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFH--GIRSKTVNSWNALIGGHAQSNDPRLSLDA 483
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
+M S + PD T ++ AC+K+ SL + ++H +I + L D+FV ++ +YI
Sbjct: 484 HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 543
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
CG L + + LF+ ME+ +VSW+++I GY Q G D AL +F +M G+ ++++ V
Sbjct: 544 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 603
Query: 509 LTACS-----HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
ACS +G L ++E++ I CS ++D+ A+ G + ++ N
Sbjct: 604 FGACSLLPSLRLGREAHAYALKHLLEDDAFIA-----CS-LIDMYAKNGSITQSSKVFNG 657
Query: 564 MACDADIVVWKSLL 577
+ + W +++
Sbjct: 658 LK-EKSTASWNAMI 670
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 188/414 (45%), Gaps = 49/414 (11%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
+++H + L + + ++ N + Y KCGSL A+ F + + V SW A+I G +Q+
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
++ ++QM SG++P FT S++ ACS L S+ LG+++H +I++ L
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 534
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG-- 232
+++++Y + + +F + K + SW ++I + + G+ AL F +M+ +G
Sbjct: 535 LSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 594
Query: 233 --------------------------AYQPNEFIFGSVFSACS-----------NFARIL 255
AY + F ACS + +
Sbjct: 595 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 654
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
FN + ASWNA+I G H A EA+ LF EM+ PD LT +L AC +
Sbjct: 655 FNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLI 714
Query: 316 YQGMQVHSYIIKM----GFDSNVPVCNAILTMYAKCSVLCNAL-LVFKELGKNADSVSWN 370
++G++ Y+ +M G N+ ++ M + L AL +V +E+ + AD W
Sbjct: 715 HEGLR---YLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWK 771
Query: 371 SIIAACLQHNQAEELFRLFSRM--LASQIKPDHITFNDVMGACAKMASLEMVTQ 422
S++++C H E ++ +++ L + +++ +++ K + V Q
Sbjct: 772 SLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQ 825
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 152/307 (49%), Gaps = 23/307 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T L+SACS L+SL+LG++VH I+ + + D+ + +L++Y CG L + FD M
Sbjct: 498 TVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM 557
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+++VSW +I G QN + A+ ++ QM+ G+ + + ACS L S+ LGR
Sbjct: 558 EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGR 617
Query: 157 QLHAHVIKSEHGSHLIAQNALIA-----MYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ HA+ +K HL+ +A IA MY K I + VF+G+ K SW +MI
Sbjct: 618 EAHAYALK-----HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 672
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS----- 261
+ G EA+ F EM G + P++ F V +AC++ I +++ S
Sbjct: 673 YGIHGLAKEAIKLFEEMQRTG-HNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLK 731
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
P+L + +I + ++A+ + +E E D SLL +C L G +V
Sbjct: 732 PNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE--ADVGIWKSLLSSCRIHQNLEMGEKV 789
Query: 322 HSYIIKM 328
+ + ++
Sbjct: 790 AAKLFEL 796
>gi|125563707|gb|EAZ09087.1| hypothetical protein OsI_31353 [Oryza sativa Indica Group]
Length = 810
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 185/581 (31%), Positives = 300/581 (51%), Gaps = 42/581 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY+G +SAC++ L +GR VH +L + DV + ++NMY KCG + A F +M
Sbjct: 172 TYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRM 231
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P RNVVSWT IAG Q+ + A+ L +M+++GV ++T SI+ AC+ + V
Sbjct: 232 PVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREAS 291
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR-KDVTSWGSMIAAFSKL 215
Q+H V+K+E + + ALI+ YT F I + VF + + W + I+ S
Sbjct: 292 QIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGVSNH 351
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSA---------------------------- 247
L ++ M H G +PN+ + SVFS+
Sbjct: 352 SL-LRSVQLLRRMFHQG-LRPNDKCYASVFSSVNSIEFGGQLHSSAIKEGFIHGILVGSA 409
Query: 248 -------CSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
C N + +F E+ D SW A++AG A+H ++ EA F M PD
Sbjct: 410 LSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPD 469
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+++ ++L AC L +G +VH + +++ + + + ++MY+KC + A +F
Sbjct: 470 HVSLTAILSACNRSECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTARRIF- 527
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ D V W+S+I+ + EE LF M+A+ I+ D + ++ CA +A
Sbjct: 528 DATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPF 587
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
LH Y K G+ D V + L+ +Y + G++ +RK+F+ + PD+V+W+++I GYA
Sbjct: 588 YCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYA 647
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
Q G AL +F M LGV P+ V LV VL+ACS GLVE+G + + M YG+ P
Sbjct: 648 QHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPEL 707
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H C+VDLL R+G + EA+ F++ M D++VW +L+A+
Sbjct: 708 QHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAA 748
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/545 (24%), Positives = 253/545 (46%), Gaps = 54/545 (9%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
++++ K G L DA F + V W A ++G +N + A++++ M+ P
Sbjct: 110 MVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPN 169
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
FT+ + AC+ + +GR +H V++ + + +L+ MY K + A F
Sbjct: 170 SFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFW 229
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC------- 248
+ ++V SW + IA F + + A+ EM+ +G N++ S+ AC
Sbjct: 230 RMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGV-AINKYTATSILLACAQMSMVR 288
Query: 249 ----------------------------SNFARI-----LFNEIDS-PDLASWNALIAGV 274
+NF I +F E + + + W+A I+GV
Sbjct: 289 EASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGV 348
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
++HS ++ L M + L P+ S+ + ++ G Q+HS IK GF +
Sbjct: 349 SNHS-LLRSVQLLRRMFHQGLRPNDKCYASVFSSVN---SIEFGGQLHSSAIKEGFIHGI 404
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V +A+ TMY++C + ++ VF+E+ + D VSW +++A H + E F F M+
Sbjct: 405 LVGSALSTMYSRCDNVQDSYKVFEEM-QERDGVSWTAMVAGFATHGHSVEAFLTFRNMIL 463
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
KPDH++ ++ AC + L ++H + + F+ + + +Y KC + +
Sbjct: 464 DGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQT 522
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
AR++F+ D V WSS+I GYA GCG+EA+ LF M + + + +L+ C+
Sbjct: 523 ARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCAD 582
Query: 515 VG--LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
+ + LH Y I + GI+ + S +V + +R+G + ++ ++++ D+V
Sbjct: 583 IARPFYCKPLHGYAI---KAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISV-PDLVA 638
Query: 573 WKSLL 577
W +++
Sbjct: 639 WTTII 643
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/486 (23%), Positives = 219/486 (45%), Gaps = 48/486 (9%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ I T ++ AC+ + ++ ++H +L ++ D V++ +++ Y G +E +
Sbjct: 267 VAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSE 326
Query: 91 MGFDKMPQ-RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F++ N W+A I+G S N+ +++L +M G+ P + S+ S +
Sbjct: 327 KVFEEAGTVSNRSIWSAFISGVS-NHSLLRSVQLLRRMFHQGLRPNDKCYASVF---SSV 382
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
S+ G QLH+ IK ++ +AL MY++ D + D+ VF + +D SW +M+
Sbjct: 383 NSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMV 442
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------- 249
A F+ G+ +EA F M+ G ++P+ ++ SAC+
Sbjct: 443 AGFATHGHSVEAFLTFRNMILDG-FKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYG 501
Query: 250 -------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
AR +F+ D W+++I+G A++ EA+SLF M
Sbjct: 502 ETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLM 561
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ D S+L C + +H Y IK G S+ V ++++ +Y++ +
Sbjct: 562 VAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNM 621
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
++ VF E+ D V+W +II QH ++ +F M+ ++PD + V+ A
Sbjct: 622 DDSRKVFDEISV-PDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSA 680
Query: 411 CAKMASLEM-VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVV 468
C++ +E + T G+ ++ ++D+ + G L A+ + M PD++
Sbjct: 681 CSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLM 740
Query: 469 SWSSLI 474
WS+L+
Sbjct: 741 VWSTLV 746
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 170/379 (44%), Gaps = 43/379 (11%)
Query: 43 SACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVV 102
S SS+ S++ G ++H + +++ + + MY +C +++D+ F++M +R+ V
Sbjct: 377 SVFSSVNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGV 436
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
SWTAM+AG + + +A + M+ G P + +I+ AC+ + G+++H H
Sbjct: 437 SWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHT 496
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL 222
++ +G + I+MY+K + AR +F KD W SMI+ ++ G EA+
Sbjct: 497 LRV-YGETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAI 555
Query: 223 CHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------------- 254
F M+ + + + +I S+ S C++ AR
Sbjct: 556 SLFQLMVA-ASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKV 614
Query: 255 ------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
+F+EI PDL +W +I G A H ++ A+++F M + PD + +
Sbjct: 615 YSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVL 674
Query: 303 HSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
S+L AC + QG +S G + + ++ + + L A +
Sbjct: 675 VSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMP 734
Query: 362 KNADSVSWNSIIAACLQHN 380
D + W++++AAC H+
Sbjct: 735 MKPDLMVWSTLVAACRVHD 753
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 112/226 (49%), Gaps = 7/226 (3%)
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
QV+ K G N VC ++ + AK L +AL VF + G + +V WN+ ++ +++
Sbjct: 90 QVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFAD-GDPSSAVCWNAAVSGAVRN 148
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+ +F M+ +P+ T++ + ACA L + +H + + +DVFV
Sbjct: 149 GEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVG 208
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
L+++Y KCG +G+A + F M +VVSW++ I G+ Q A+ L M GV+
Sbjct: 209 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 268
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
N T +L AC+ + +V E ++ + ++ T + CVV
Sbjct: 269 INKYTATSILLACAQMSMVREASQIHGM------VLKTEMYLDCVV 308
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 132/296 (44%), Gaps = 46/296 (15%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++SAC+ L G++VH H L + + + ++MY KC ++ AR FD P ++
Sbjct: 476 ILSACNRSECLLKGKEVHGHTLRVYGE-TTFINDCFISMYSKCQGVQTARRIFDATPCKD 534
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
V W++MI+G + N +AI L+ M+ + + + SI+ C+ + + LH
Sbjct: 535 QVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHG 594
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+ IK+ S ++L+ +Y++ + D+R VF I+ D+ +W ++I +++ G
Sbjct: 595 YAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQN 654
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNE----------------- 258
AL F+ M+ G +P+ + SV SACS + FN
Sbjct: 655 ALAMFDLMVQLGV-RPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCM 713
Query: 259 ----------------IDS----PDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+DS PDL W+ L+A H + + F E + RE
Sbjct: 714 VDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAACRVHDDT--VLGRFVENKIRE 767
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 141/328 (42%), Gaps = 14/328 (4%)
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+F + D WNA ++G + A+ +F +M P+ T L AC
Sbjct: 126 VFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEE 185
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
L G VH +++ + +V V +++ MYAKC + A+ F + + VSW + IA
Sbjct: 186 LSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVR-NVVSWTTAIA 244
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
+Q ++ L M+ + + + T ++ ACA+M+ + +Q+H + KT +
Sbjct: 245 GFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYL 304
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS----WSSLILGYAQFGCGDEALKLF 490
D V L+ Y G + + K+F E VS WS+ I G + +++L
Sbjct: 305 DCVVKEALISTYTNFGFIELSEKVF---EEAGTVSNRSIWSAFISGVSNHSL-LRSVQLL 360
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
RM G+ PN V S V +E G L+ E G I S + + +R
Sbjct: 361 RRMFHQGLRPNDKCYASVF---SSVNSIEFGGQLHSSAIKE-GFIHGILVGSALSTMYSR 416
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLA 578
V ++ +M + D V W +++A
Sbjct: 417 CDNVQDSYKVFEEMQ-ERDGVSWTAMVA 443
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 118/249 (47%), Gaps = 16/249 (6%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
+IRI + ++S C+ + + +H + + + D + + ++ +Y + G+++D+
Sbjct: 565 SIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDS 624
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD++ ++V+WT +I G +Q+ +A+ ++ M+Q GV P S++ ACS
Sbjct: 625 RKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRN 684
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILDARNVFSGIARK-DVTSWG 206
G V G + + +++ +G Q+ ++ + + R+ +A+ + K D+ W
Sbjct: 685 GLVEQGFN-YFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWS 743
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-SNFARILFNEIDSPDLA 265
+++AA C ++ G + N+ G+ S + + IL N D ++A
Sbjct: 744 TLVAA-----------CRVHDDTVLGRFVENKIREGNYDSGSFATLSNILANSGDWEEVA 792
Query: 266 SWNALIAGV 274
+ GV
Sbjct: 793 RIRKTMKGV 801
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
P ++ + + ACA+ + + Q++C K GL+ + +V G++D+ K G L A ++
Sbjct: 67 PSQFSYGNALAACARAPAPALAEQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRV 126
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS----- 513
F + V W++ + G + G G A+++F M PN T G L+AC+
Sbjct: 127 FADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEEL 186
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
VG GL L R + EY + + +V++ A+ G + A +M ++V W
Sbjct: 187 SVGRAVHGLVLRR--DPEYDVFVG----TSLVNMYAKCGDMGAAMREFWRMPVR-NVVSW 239
Query: 574 KSLLA 578
+ +A
Sbjct: 240 TTAIA 244
>gi|46403989|gb|AAS93059.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 810
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 185/581 (31%), Positives = 300/581 (51%), Gaps = 42/581 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY+G +SAC++ L +GR VH +L + DV + ++NMY KCG + A F +M
Sbjct: 172 TYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRM 231
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P RNVVSWT IAG Q+ + A+ L +M+++GV ++T SI+ AC+ + V
Sbjct: 232 PVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREAS 291
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR-KDVTSWGSMIAAFSKL 215
Q+H V+K+E + + ALI+ YT F I + VF + + W + I+ S
Sbjct: 292 QIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGVSNH 351
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSA---------------------------- 247
L ++ M H G +PN+ + SVFS+
Sbjct: 352 SL-LRSVQLLRRMFHQG-LRPNDKCYASVFSSVNSIEFGGQLHSSAIKEGFIHGILVGSA 409
Query: 248 -------CSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
C N + +F E+ D SW A++AG A+H ++ EA F M PD
Sbjct: 410 LSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPD 469
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+++ ++L AC L +G +VH + +++ + + + ++MY+KC + A +F
Sbjct: 470 HVSLTAILSACNRSECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTARRIF- 527
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ D V W+S+I+ + EE LF M+A+ I+ D + ++ CA +A
Sbjct: 528 DATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPF 587
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
LH Y K G+ D V + L+ +Y + G++ +RK+F+ + PD+V+W+++I GYA
Sbjct: 588 YCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYA 647
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
Q G AL +F M LGV P+ V LV VL+ACS GLVE+G + + M YG+ P
Sbjct: 648 QHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPEL 707
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H C+VDLL R+G + EA+ F++ M D++VW +L+A+
Sbjct: 708 QHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAA 748
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/545 (24%), Positives = 253/545 (46%), Gaps = 54/545 (9%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
++++ K G L DA F + V W A ++G +N + A++++ M+ P
Sbjct: 110 MVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPN 169
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
FT+ + AC+ + +GR +H V++ + + +L+ MY K + A F
Sbjct: 170 SFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFW 229
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC------- 248
+ ++V SW + IA F + + A+ EM+ +G N++ S+ AC
Sbjct: 230 RMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGV-AINKYTATSILLACAQMSMVR 288
Query: 249 ----------------------------SNFARI-----LFNEIDS-PDLASWNALIAGV 274
+NF I +F E + + + W+A I+GV
Sbjct: 289 EASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGV 348
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
++HS ++ L M + L P+ S+ + ++ G Q+HS IK GF +
Sbjct: 349 SNHS-LLRSVQLLRRMFHQGLRPNDKCYASVFSSVN---SIEFGGQLHSSAIKEGFIHGI 404
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V +A+ TMY++C + ++ VF+E+ + D VSW +++A H + E F F M+
Sbjct: 405 LVGSALSTMYSRCDNVQDSYKVFEEM-QERDGVSWTAMVAGFATHGHSVEAFLTFRNMIL 463
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
KPDH++ ++ AC + L ++H + + F+ + + +Y KC + +
Sbjct: 464 DGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQT 522
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
AR++F+ D V WSS+I GYA GCG+EA+ LF M + + + +L+ C+
Sbjct: 523 ARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCAD 582
Query: 515 VG--LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
+ + LH Y I + GI+ + S +V + +R+G + ++ ++++ D+V
Sbjct: 583 IARPFYCKPLHGYAI---KAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISV-PDLVA 638
Query: 573 WKSLL 577
W +++
Sbjct: 639 WTTII 643
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/486 (23%), Positives = 219/486 (45%), Gaps = 48/486 (9%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ I T ++ AC+ + ++ ++H +L ++ D V++ +++ Y G +E +
Sbjct: 267 VAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSE 326
Query: 91 MGFDKMPQ-RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F++ N W+A I+G S N+ +++L +M G+ P + S+ S +
Sbjct: 327 KVFEEAGTVSNRSIWSAFISGVS-NHSLLRSVQLLRRMFHQGLRPNDKCYASVF---SSV 382
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
S+ G QLH+ IK ++ +AL MY++ D + D+ VF + +D SW +M+
Sbjct: 383 NSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMV 442
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------- 249
A F+ G+ +EA F M+ G ++P+ ++ SAC+
Sbjct: 443 AGFATHGHSVEAFLTFRNMILDG-FKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYG 501
Query: 250 -------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
AR +F+ D W+++I+G A++ EA+SLF M
Sbjct: 502 ETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLM 561
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ D S+L C + +H Y IK G S+ V ++++ +Y++ +
Sbjct: 562 VAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNM 621
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
++ VF E+ D V+W +II QH ++ +F M+ ++PD + V+ A
Sbjct: 622 DDSRKVFDEISV-PDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSA 680
Query: 411 CAKMASLEM-VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVV 468
C++ +E + T G+ ++ ++D+ + G L A+ + M PD++
Sbjct: 681 CSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLM 740
Query: 469 SWSSLI 474
WS+L+
Sbjct: 741 VWSTLV 746
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 170/379 (44%), Gaps = 43/379 (11%)
Query: 43 SACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVV 102
S SS+ S++ G ++H + +++ + + MY +C +++D+ F++M +R+ V
Sbjct: 377 SVFSSVNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGV 436
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
SWTAM+AG + + +A + M+ G P + +I+ AC+ + G+++H H
Sbjct: 437 SWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHT 496
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL 222
++ +G + I+MY+K + AR +F KD W SMI+ ++ G EA+
Sbjct: 497 LRV-YGETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAI 555
Query: 223 CHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------------- 254
F M+ + + + +I S+ S C++ AR
Sbjct: 556 SLFQLMVA-ASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKV 614
Query: 255 ------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
+F+EI PDL +W +I G A H ++ A+++F M + PD + +
Sbjct: 615 YSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVL 674
Query: 303 HSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
S+L AC + QG +S G + + ++ + + L A +
Sbjct: 675 VSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMP 734
Query: 362 KNADSVSWNSIIAACLQHN 380
D + W++++AAC H+
Sbjct: 735 MKPDLMVWSTLVAACRVHD 753
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 112/226 (49%), Gaps = 7/226 (3%)
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
QV+ K G N VC ++ + AK L +AL VF + G + +V WN+ ++ +++
Sbjct: 90 QVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFAD-GDPSSAVCWNAAVSGAVRN 148
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+ +F M+ +P+ T++ + ACA L + +H + + +DVFV
Sbjct: 149 GEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVG 208
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
L+++Y KCG +G+A + F M +VVSW++ I G+ Q A+ L M GV+
Sbjct: 209 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 268
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
N T +L AC+ + +V E ++ + ++ T + CVV
Sbjct: 269 INKYTATSILLACAQMSMVREASQIHGM------VLKTEMYLDCVV 308
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 132/296 (44%), Gaps = 46/296 (15%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++SAC+ L G++VH H L + + + ++MY KC ++ AR FD P ++
Sbjct: 476 ILSACNRSECLLKGKEVHGHTLRVYGE-TTFINDCFISMYSKCQGVQTARRIFDATPCKD 534
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
V W++MI+G + N +AI L+ M+ + + + SI+ C+ + + LH
Sbjct: 535 QVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHG 594
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+ IK+ S ++L+ +Y++ + D+R VF I+ D+ +W ++I +++ G
Sbjct: 595 YAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQN 654
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNE----------------- 258
AL F+ M+ G +P+ + SV SACS + FN
Sbjct: 655 ALAMFDLMVQLGV-RPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCM 713
Query: 259 ----------------IDS----PDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+DS PDL W+ L+A H + + F E + RE
Sbjct: 714 VDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAACRVHDDT--VLGRFVENKIRE 767
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 141/328 (42%), Gaps = 14/328 (4%)
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+F + D WNA ++G + A+ +F +M P+ T L AC
Sbjct: 126 VFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEE 185
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
L G VH +++ + +V V +++ MYAKC + A+ F + + VSW + IA
Sbjct: 186 LSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVR-NVVSWTTAIA 244
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
+Q ++ L M+ + + + T ++ ACA+M+ + +Q+H + KT +
Sbjct: 245 GFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYL 304
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS----WSSLILGYAQFGCGDEALKLF 490
D V L+ Y G + + K+F E VS WS+ I G + +++L
Sbjct: 305 DCVVKEALISTYTNFGFIELSEKVF---EEAGTVSNRSIWSAFISGVSNHSL-LRSVQLL 360
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
RM G+ PN V S V +E G L+ E G I S + + +R
Sbjct: 361 RRMFHQGLRPNDKCYASVF---SSVNSIEFGGQLHSSAIKE-GFIHGILVGSALSTMYSR 416
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLA 578
V ++ +M + D V W +++A
Sbjct: 417 CDNVQDSYKVFEEMQ-ERDGVSWTAMVA 443
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 118/249 (47%), Gaps = 16/249 (6%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
+IRI + ++S C+ + + +H + + + D + + ++ +Y + G+++D+
Sbjct: 565 SIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDS 624
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD++ ++V+WT +I G +Q+ +A+ ++ M+Q GV P S++ ACS
Sbjct: 625 RKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRN 684
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILDARNVFSGIARK-DVTSWG 206
G V G + + +++ +G Q+ ++ + + R+ +A+ + K D+ W
Sbjct: 685 GLVEQGFN-YFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWS 743
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-SNFARILFNEIDSPDLA 265
+++AA C ++ G + N+ G+ S + + IL N D ++A
Sbjct: 744 TLVAA-----------CRVHDDTVLGRFVENKIREGNYDSGSFATLSNILANSGDWEEVA 792
Query: 266 SWNALIAGV 274
+ GV
Sbjct: 793 RIRKTMKGV 801
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
P ++ + + ACA+ + + Q++C K GL+ + +V G++D+ K G L A ++
Sbjct: 67 PSQFSYGNALAACARAPAPALAEQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRV 126
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS----- 513
F + V W++ + G + G G A+++F M PN T G L+AC+
Sbjct: 127 FADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEEL 186
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
VG GL L R + EY + + +V++ A+ G + A +M ++V W
Sbjct: 187 SVGRAVHGLVLRR--DPEYDVFVG----TSLVNMYAKCGDMGAAMREFWRMPVR-NVVSW 239
Query: 574 KSLLA 578
+ +A
Sbjct: 240 TTAIA 244
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 183/569 (32%), Positives = 294/569 (51%), Gaps = 43/569 (7%)
Query: 52 QLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM-PQRNVVSWTAMIAG 110
+LG +VH + + DV + N ++ MYG G ++DAR F++ +RN VSW +++
Sbjct: 117 RLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
+N Q DAI+++ +M+ SG+ P +F F ++ AC+G ++ GRQ+HA V++ +
Sbjct: 177 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKD 236
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
+ NAL+ MY K R+ A +F + DV SW ++I+ G++ A+ +M +
Sbjct: 237 VFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKY 296
Query: 231 HGAYQPNEFIFGSVFSACS----------------------------------------N 250
G PN F S+ ACS +
Sbjct: 297 SGLV-PNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 355
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
AR +F+ + DL NALI+G + +EA+SLF E+R L + T+ ++L +
Sbjct: 356 DARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTA 415
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
QVH+ +K+GF + V N ++ Y KCS L +A VF+E + D ++
Sbjct: 416 SLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEEC-SSGDIIACT 474
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
S+I A Q + E +LF ML ++PD + ++ ACA +++ E Q+H ++ K
Sbjct: 475 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
D F N L+ Y KCGS+ A F+ + VVSWS++I G AQ G G AL+LF
Sbjct: 535 QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELF 594
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
RM G++PN +T+ VL AC+H GLV+E + M+ +GI T EH SC++DLL R
Sbjct: 595 GRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR 654
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
AG + +A + +N M A+ +W +LL +
Sbjct: 655 AGKLDDAMELVNSMPFQANASIWGALLGA 683
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 147/488 (30%), Positives = 232/488 (47%), Gaps = 50/488 (10%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+P+ + + +++AC+ R+++ GR+VH ++ DV N +++MY K G ++ A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ F+KMP +VVSW A+I+GC N ++ AI+L +QM SG++P FT SI+KACSG G
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ LGRQ+H +IK+ S L+ MY K + DAR VF + +D+ ++I+
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS 377
Query: 211 AFSKLGYELEALCHFNEMLHHG-------------------------------------- 232
S G EAL F E+ G
Sbjct: 378 GCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIF 437
Query: 233 -AYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
A+ N I +C + A +F E S D+ + ++I ++ + A+ LF EM
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEML 497
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ L PD + SLL AC QG QVH+++IK F S+ NA++ YAKC +
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIE 557
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A L F L + VSW+++I QH + LF RM+ I P+HIT V+ AC
Sbjct: 558 DAELAFSSLPERG-VVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCAC 616
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNG----LMDIYIKCGSLGSARKLFNFME-NPD 466
+V + Y F + ++D+ + G L A +L N M +
Sbjct: 617 NHAG---LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQAN 673
Query: 467 VVSWSSLI 474
W +L+
Sbjct: 674 ASIWGALL 681
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 240/509 (47%), Gaps = 46/509 (9%)
Query: 58 HDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQE 117
H H L K +NH+++ Y KC AR FD++P VSW++++ S N
Sbjct: 25 HLHASLLKSGSLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLP 84
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
AI+ + M GV +F ++K + LG Q+HA + + GS + NAL
Sbjct: 85 RSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVFVANAL 141
Query: 178 IAMYTKFDRILDARNVFS-GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
+AMY F + DAR VF+ + ++ SW +++A+ K +A+ F EM+ G QP
Sbjct: 142 VAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG-IQP 200
Query: 237 NEFIFGSVFSACS----------------------------------------NFARILF 256
EF F V +AC+ + A ++F
Sbjct: 201 TEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIF 260
Query: 257 NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
++ D+ SWNALI+G + + + A+ L +M+ L+P+ T+ S+L AC G
Sbjct: 261 EKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFD 320
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
G Q+H ++IK DS+ + ++ MYAK L +A VF + + D + N++I+ C
Sbjct: 321 LGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWM-FHRDLILCNALISGC 379
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
+ +E LF + + + T V+ + A + + Q+H K G FD
Sbjct: 380 SHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDA 439
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
V+NGL+D Y KC L A ++F + D+++ +S+I +Q G+ A+KLF M
Sbjct: 440 HVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRK 499
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
G+ P+ L +L AC+ + E+G ++
Sbjct: 500 GLEPDPFVLSSLLNACASLSAYEQGKQVH 528
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 152/289 (52%), Gaps = 7/289 (2%)
Query: 243 SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
S +S C AR +F+EI P SW++L+ +++ A+ F MR + +
Sbjct: 45 SFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEF 104
Query: 301 TVHSLL-CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+ +L C RL G QVH+ + GF S+V V NA++ MY + +A VF E
Sbjct: 105 ALPVVLKCVPDARL----GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNE 160
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
++VSWN +++A ++++Q + ++F M+ S I+P F+ V+ AC ++E
Sbjct: 161 ADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEA 220
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
Q+H + + G DVF N L+D+Y+K G + A +F M + DVVSW++LI G
Sbjct: 221 GRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
G A++L +M+ G+ PN+ TL +L ACS G + G ++ M
Sbjct: 281 NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFM 329
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 183/569 (32%), Positives = 294/569 (51%), Gaps = 43/569 (7%)
Query: 52 QLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM-PQRNVVSWTAMIAG 110
+LG +VH + + DV + N ++ MYG G ++DAR F++ +RN VSW +++
Sbjct: 117 RLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
+N Q DAI+++ +M+ SG+ P +F F ++ AC+G ++ GRQ+HA V++ +
Sbjct: 177 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKD 236
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
+ NAL+ MY K R+ A +F + DV SW ++I+ G++ A+ +M +
Sbjct: 237 VFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKY 296
Query: 231 HGAYQPNEFIFGSVFSACS----------------------------------------N 250
G PN F S+ ACS +
Sbjct: 297 SGLV-PNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 355
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
AR +F+ + DL NALI+G + +EA+SLF E+R L + T+ ++L +
Sbjct: 356 DARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTA 415
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
QVH+ +K+GF + V N ++ Y KCS L +A VF+E + D ++
Sbjct: 416 SLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEEC-SSGDIIACT 474
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
S+I A Q + E +LF ML ++PD + ++ ACA +++ E Q+H ++ K
Sbjct: 475 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
D F N L+ Y KCGS+ A F+ + VVSWS++I G AQ G G AL+LF
Sbjct: 535 QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELF 594
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
RM G++PN +T+ VL AC+H GLV+E + M+ +GI T EH SC++DLL R
Sbjct: 595 GRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR 654
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
AG + +A + +N M A+ +W +LL +
Sbjct: 655 AGKLDDAMELVNSMPFQANASIWGALLGA 683
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 147/488 (30%), Positives = 232/488 (47%), Gaps = 50/488 (10%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+P+ + + +++AC+ R+++ GR+VH ++ DV N +++MY K G ++ A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ F+KMP +VVSW A+I+GC N ++ AI+L +QM SG++P FT SI+KACSG G
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ LGRQ+H +IK+ S L+ MY K + DAR VF + +D+ ++I+
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS 377
Query: 211 AFSKLGYELEALCHFNEMLHHG-------------------------------------- 232
S G EAL F E+ G
Sbjct: 378 GCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIF 437
Query: 233 -AYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
A+ N I +C + A +F E S D+ + ++I ++ + A+ LF EM
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEML 497
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ L PD + SLL AC QG QVH+++IK F S+ NA++ YAKC +
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIE 557
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A L F L + VSW+++I QH + LF RM+ I P+HIT V+ AC
Sbjct: 558 DAELAFSSLPERG-VVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCAC 616
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNG----LMDIYIKCGSLGSARKLFNFME-NPD 466
+V + Y F + ++D+ + G L A +L N M +
Sbjct: 617 NHAG---LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQAN 673
Query: 467 VVSWSSLI 474
W +L+
Sbjct: 674 ASIWGALL 681
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 240/509 (47%), Gaps = 46/509 (9%)
Query: 58 HDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQE 117
H H L K +NH+++ Y KC AR FD++P VSW++++ S N
Sbjct: 25 HLHASLLKSGSLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLP 84
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
AI+ + M GV +F ++K + LG Q+HA + + GS + NAL
Sbjct: 85 RSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVFVANAL 141
Query: 178 IAMYTKFDRILDARNVFS-GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
+AMY F + DAR VF+ + ++ SW +++A+ K +A+ F EM+ G QP
Sbjct: 142 VAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG-IQP 200
Query: 237 NEFIFGSVFSACS----------------------------------------NFARILF 256
EF F V +AC+ + A ++F
Sbjct: 201 TEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIF 260
Query: 257 NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
++ D+ SWNALI+G + + + A+ L +M+ L+P+ T+ S+L AC G
Sbjct: 261 EKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFD 320
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
G Q+H ++IK DS+ + ++ MYAK L +A VF + + D + N++I+ C
Sbjct: 321 LGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWM-FHRDLILCNALISGC 379
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
+ +E LF + + + T V+ + A + + Q+H K G FD
Sbjct: 380 SHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDA 439
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
V+NGL+D Y KC L A ++F + D+++ +S+I +Q G+ A+KLF M
Sbjct: 440 HVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRK 499
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
G+ P+ L +L AC+ + E+G ++
Sbjct: 500 GLEPDPFVLSSLLNACASLSAYEQGKQVH 528
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 151/289 (52%), Gaps = 7/289 (2%)
Query: 243 SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
S +S C AR F+EI P SW++L+ +++ A+ F MR + +
Sbjct: 45 SFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEF 104
Query: 301 TVHSLL-CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+ +L C RL G QVH+ + GF S+V V NA++ MY + +A VF E
Sbjct: 105 ALPVVLKCVPDARL----GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNE 160
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
++VSWN +++A ++++Q + ++F M+ S I+P F+ V+ AC ++E
Sbjct: 161 ADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEA 220
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
Q+H + + G DVF N L+D+Y+K G + A +F M + DVVSW++LI G
Sbjct: 221 GRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
G A++L +M+ G+ PN+ TL +L ACS G + G ++ M
Sbjct: 281 NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFM 329
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 188/613 (30%), Positives = 309/613 (50%), Gaps = 44/613 (7%)
Query: 8 SLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQ 67
+L EAL AY + + + + +A ++S C SL + G +V +++S Q
Sbjct: 119 ALSSNGYLEEALRAYRQMRRD-GVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQ 177
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
V + N ++ M+G G + DA FD+M + + +SW AMI+ S + ++ M
Sbjct: 178 NQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDM 237
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
G+ P T S++ C+ G +H+ ++S S + NAL+ MY+ ++
Sbjct: 238 RHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL 297
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
DA +F ++R+D+ SW +MI+++ + +AL ++ H PN F S A
Sbjct: 298 SDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNE-SPNHLTFSSALGA 356
Query: 248 CSNF----------------------------------------ARILFNEIDSPDLASW 267
CS+ A +F + + D+ S+
Sbjct: 357 CSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSY 416
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYII 326
N LI G A + +AM +FS MR + P+ +T+ ++ + L+ G +H+YII
Sbjct: 417 NVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYII 476
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+ GF S+ V N+++TMYAKC L ++ +F + N + VSWN+IIAA +Q EE
Sbjct: 477 RTGFLSDEYVANSLITMYAKCGNLESSTNIFNSI-TNKNIVSWNAIIAANVQLGHGEEAL 535
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
+LF M + K D + + + +CA +ASLE QLH K+GL D +V+N MD+Y
Sbjct: 536 KLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMY 595
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KCG + ++ W++LI GYA++G EA + F +M + G P+ VT V
Sbjct: 596 GKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFV 655
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
+L+ACSH GLV++G+ Y M + +G+ P +HC C+VDLL R G EAE FI +M
Sbjct: 656 ALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPV 715
Query: 567 DADIVVWKSLLAS 579
+ ++W+SLL+S
Sbjct: 716 LPNDLIWRSLLSS 728
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 155/531 (29%), Positives = 260/531 (48%), Gaps = 46/531 (8%)
Query: 39 AGLISACSSL---RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
A L++AC + G +H + +V + +L++YG G + DA+ F +
Sbjct: 45 ASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWE 104
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP+RNVVSWTA++ S N +A++ Y QM + GV F +++ C L + G
Sbjct: 105 MPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPG 164
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
Q+ + VI S + + N+LI M+ R+ DA +F + D SW +MI+ +S
Sbjct: 165 LQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQ 224
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G + F++M HHG +P+ S+ S C++
Sbjct: 225 GICSKCFLVFSDMRHHG-LRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTV 283
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A LF + DL SWN +I+ + N+ +A+ ++
Sbjct: 284 INALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNE 343
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ LT S L AC L G VH+ ++++ N+ V N+++TMY KC+ + +A
Sbjct: 344 SPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEK 403
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF+ + + D VS+N +I + ++FS M ++ IKP++IT ++ G+ A
Sbjct: 404 VFQSMPTH-DIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSN 462
Query: 416 SLEMVTQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
L + LH YI +TG D +V N L+ +Y KCG+L S+ +FN + N ++VSW+++I
Sbjct: 463 DLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAII 522
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
Q G G+EALKLF M+ G + V L L++C+ + +EEG+ L+
Sbjct: 523 AANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLH 573
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 134/531 (25%), Positives = 248/531 (46%), Gaps = 54/531 (10%)
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG---SV 152
M R +W ++GC + ++ A ++ M + GV F S++ AC G +
Sbjct: 1 MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G +HA ++ ++ AL+ +Y + DA+ +F + ++V SW +++ A
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVAL 120
Query: 213 SKLGYELEALCHFNEMLHHGAYQP-NEFIFGSVFSAC----------------------- 248
S GY EAL + +M G P N F +V S C
Sbjct: 121 SSNGYLEEALRAYRQMRRDGV--PCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQN 178
Query: 249 ------------SNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
N R+ LF+ ++ D SWNA+I+ + ++ +FS+MR
Sbjct: 179 QVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMR 238
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
L PD T+ SL+ C G +HS ++ DS+V V NA++ MY+ L
Sbjct: 239 HHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLS 298
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A +F + + D +SWN++I++ +Q+ + + + ++ + P+H+TF+ +GAC
Sbjct: 299 DAEFLFWNMSRR-DLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGAC 357
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ +L +H + + L ++ V N L+ +Y KC S+ A K+F M D+VS++
Sbjct: 358 SSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYN 417
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV---GVLTACSHVGLVEEGLHLYRIM 528
LI GYA G +A+++F+ MRS G+ PN +T++ G + + + LH Y I
Sbjct: 418 VLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYII- 476
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G + + ++ + A+ G + + + N + + +IV W +++A+
Sbjct: 477 --RTGFLSDEYVANSLITMYAKCGNLESSTNIFNSIT-NKNIVSWNAIIAA 524
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 184/575 (32%), Positives = 290/575 (50%), Gaps = 48/575 (8%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM----PQRNVVSWTA 106
++ G +VH + ++ DV + N ++ +YG G +++AR FD+ +RN VSW
Sbjct: 116 VRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNT 175
Query: 107 MIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE 166
MI+ +N Q DAI ++ +M+ SG P +F F ++ AC+G + GRQ+H V+++
Sbjct: 176 MISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTG 235
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
+ + NAL+ MY+K I A VF + DV SW + I+ G++ AL
Sbjct: 236 YEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLL 295
Query: 227 EMLHHGAYQPNEFIFGSVFSACS------------------------------------- 249
+M G PN F SV AC+
Sbjct: 296 QMKSSGLV-PNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKH 354
Query: 250 ---NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD--GLTVHS 304
+ AR +F+ + DL WNALI+G + E +SLF MR L D T+ S
Sbjct: 355 GFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAS 414
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
+L + + QVH+ K+G S+ V N ++ Y KC L A+ VFKE ++
Sbjct: 415 VLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKE-SRSD 473
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
D +S +++ A Q + E+ +LF +ML ++PD + ++ AC +++ E Q+H
Sbjct: 474 DIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVH 533
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
++ K DVF N L+ Y KCGS+ A F+ + +VSWS++I G AQ G G
Sbjct: 534 AHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGK 593
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV 544
AL LF RM GV+PN +TL VL+AC+H GLV++ + M+ +GI T EH +C+
Sbjct: 594 RALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACM 653
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+D+L RAG + +A + +N M A+ VW +LL +
Sbjct: 654 IDILGRAGKLEDAMELVNNMPFQANAAVWGALLGA 688
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 151/537 (28%), Positives = 252/537 (46%), Gaps = 53/537 (9%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P T ++ + RSL G +H H+L S NH+L +Y +C AR FD
Sbjct: 4 PETIGSALARFGTSRSLFAGAHLHSHLLKSGLLAG--FSNHLLTLYSRCRLPSAARAVFD 61
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
++P VSW++++ S N DA+ + M GV +F ++K V
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAP---DVRF 118
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS---GI-ARKDVTSWGSMIA 210
G Q+HA + + + NAL+A+Y F + +AR +F G+ ++ SW +MI+
Sbjct: 119 GAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMIS 178
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------- 249
A+ K +A+ F EM+ G +PNEF F V +AC+
Sbjct: 179 AYVKNDQSGDAIGVFREMVWSGE-RPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYE 237
Query: 250 -------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
A +F ++ + D+ SWNA I+G +H + + A+ L +M
Sbjct: 238 KDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQM 297
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ L+P+ T+ S+L AC G G Q+H +++K D + V ++ MYAK L
Sbjct: 298 KSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFL 357
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD--HITFNDVM 408
+A VF + + D + WN++I+ C + E+ LF RM + D T V+
Sbjct: 358 DDARKVFDFMPRR-DLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVL 416
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
+ A ++ Q+H K GL D V+NGL+D Y KCG L A K+F + D++
Sbjct: 417 KSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDII 476
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
S ++++ +Q G++A+KLF +M G+ P+ L +L AC+ + E+G ++
Sbjct: 477 SSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVH 533
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 150/508 (29%), Positives = 242/508 (47%), Gaps = 52/508 (10%)
Query: 34 RPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP+ + + +++AC+ R L+ GR+VH ++ + + DV N +++MY K G +E A
Sbjct: 202 RPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAAT 261
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
F+KMP +VVSW A I+GC + ++ A++L +QM SG++P FT S++KAC+G G+
Sbjct: 262 VFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGA 321
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
LGRQ+H ++K+ L+ MY K + DAR VF + R+D+ W ++I+
Sbjct: 322 FNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISG 381
Query: 212 FSKLGYELEALCHFNEMLHHG-AYQPNEFIFGSVFSACS--------------------- 249
S G E L F+ M G N SV + +
Sbjct: 382 CSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLL 441
Query: 250 -------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
++A +F E S D+ S ++ ++ + +A+ LF +M
Sbjct: 442 SDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQM 501
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ L PD + SLL AC QG QVH+++IK F S+V NA++ YAKC +
Sbjct: 502 LRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSI 561
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
+A + F L + VSW+++I QH + LF RML + P+HIT V+ A
Sbjct: 562 EDADMAFSGLPERG-IVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSA 620
Query: 411 CAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVV 468
C ++ + + +T G+ ++DI + G L A +L N M +
Sbjct: 621 CNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAA 680
Query: 469 SWSSLILGYAQFGCGDE-----ALKLFT 491
W +L LG ++ E A KLFT
Sbjct: 681 VWGAL-LGASRVHRDPELGRMAAEKLFT 707
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 191/590 (32%), Positives = 301/590 (51%), Gaps = 45/590 (7%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+R+ T+ ++ AC+ S+Q GR++H + DV + N +L YG CG L+D +
Sbjct: 3 VRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVK 62
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGL 149
FD+M +R+VVSW ++I S + +AI L+ +M L+SG P + S++ C+GL
Sbjct: 63 RVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGL 122
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
GRQ+H +V+K+ S + NAL+ +Y K + D+R VF I+ ++ SW ++I
Sbjct: 123 EDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAII 182
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF------------------------ 245
+ + L +AL F M+ G +PN F S+
Sbjct: 183 TSLAYLERNQDALEMFRLMID-GGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGL 241
Query: 246 ----------------SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
S S A +FN+I ++ SWNA++A A + A+ L +
Sbjct: 242 ESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQ 301
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M+ +P+ +T ++L AC L G ++H+ I+ G ++ V NA+ MYAKC
Sbjct: 302 MQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGC 361
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L A VFK + D VS+N +I Q E RLF M +K D +++ V+
Sbjct: 362 LNLARRVFKISLR--DEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVIS 419
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
ACA +A+L+ ++H + L +F+ N L+D YIKCG + A K+F + + D S
Sbjct: 420 ACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTAS 479
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+S+ILGY G A+ LF M+ GV + V+ + VL+ACSH GLVEEG + M+
Sbjct: 480 WNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQ 539
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ I PT+ H +C+VDLL RAG + EA I + + D VW +LL +
Sbjct: 540 VQ-NIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGA 588
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/495 (27%), Positives = 235/495 (47%), Gaps = 60/495 (12%)
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
GV TF ++KAC+ SV GR++H V K S + N L+ Y + D
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
+ VF + +DV SW S+I FS G+ EA+ F EM ++PN SV C+
Sbjct: 62 KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121
Query: 251 F----------------------------------------ARILFNEIDSPDLASWNAL 270
+R +F+EI + SWNA+
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAI 181
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMG 329
I +A +A+ +F M D + P+ +T S+L + L L+ G ++H + ++ G
Sbjct: 182 ITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLV-ELKLFDFGKEIHGFSLRFG 240
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
+S++ V NA++ MYAK A VF ++G+ + VSWN+++A Q+ L
Sbjct: 241 LESDIFVANALIDMYAKSGRSLQASNVFNQIGEK-NIVSWNAMVANFAQNRLELAAVDLV 299
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
+M A P+ +TF +V+ ACA++ L ++H +TG + D+FV N L D+Y KC
Sbjct: 300 RQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKC 359
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
G L AR++F + D VS++ LI+GY+Q E+L+LF M G+ ++V+ +GV+
Sbjct: 360 GCLNLARRVFK-ISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVI 418
Query: 510 TACSHVGLVEEGLHLYRIMENEYGIIPTREH-------CSCVVDLLARAGCVHEAEDFIN 562
+AC+++ +++G ++ + R+H + ++D + G + A
Sbjct: 419 SACANLAALKQGKEVHG--------LAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFR 470
Query: 563 QMACDADIVVWKSLL 577
Q+ D W S++
Sbjct: 471 QIP-SRDTASWNSMI 484
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/515 (25%), Positives = 235/515 (45%), Gaps = 48/515 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N + Y EA+ + F + N RP+ + ++ C+ L GR++H +
Sbjct: 77 NSVIGVFSVHGFYAEAI--HLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCY 134
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
++ + V + N ++++YGKCG ++D+R FD++ +RN VSW A+I + + DA
Sbjct: 135 VVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDA 194
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
++++ M+ GV P TF S++ L G+++H ++ S + NALI M
Sbjct: 195 LEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDM 254
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K R L A NVF+ I K++ SW +M+A F++ EL A+ +M G PN
Sbjct: 255 YAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEI-PNSVT 313
Query: 241 FGSVFSACS----------------------------------------NFARILFNEID 260
F +V AC+ N AR +F +I
Sbjct: 314 FTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KIS 372
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D S+N LI G + +N +E++ LF EM + + D ++ ++ AC L QG +
Sbjct: 373 LRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKE 432
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
VH ++ +++ + NA+L Y KC + A VF+++ + D+ SWNS+I
Sbjct: 433 VHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQI-PSRDTASWNSMILGYGMLG 491
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
+ LF M ++ D +++ V+ AC+ +E + ++ +
Sbjct: 492 ELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMHYA 551
Query: 441 GLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + G + A KL + PD W +L+
Sbjct: 552 CMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALL 586
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 188/425 (44%), Gaps = 60/425 (14%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++P+ T++ ++ L+ G+++H L + D+ + N +++MY K G A
Sbjct: 206 VKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQAS 265
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F+++ ++N+VSW AM+A +QN E A+ L QM G +P TF +++ AC+ +G
Sbjct: 266 NVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIG 325
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ G+++HA I++ L NAL MY K + AR VF I+ +D S+ +I
Sbjct: 326 FLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFK-ISLRDEVSYNILII 384
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------- 254
+S+ E+L F EM G + + + V SAC+N A +
Sbjct: 385 GYSQTTNCSESLRLFLEMGIKG-MKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLH 443
Query: 255 ------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+F +I S D ASWN++I G A++LF M
Sbjct: 444 THLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAM 503
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
++ + D ++ ++L AC + +G + ++ ++ + + ++
Sbjct: 504 KEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMHYACMVDLLGRAGLI 563
Query: 351 CNALLVFKELGKNADSVSWNSIIAAC-------LQHNQAEELFRLFSRMLASQIKPDHIT 403
A+ + + L D+ W +++ AC L H AE LF+L KP H
Sbjct: 564 EEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKL---------KPQHSG 614
Query: 404 FNDVM 408
+ V+
Sbjct: 615 YYSVL 619
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 188/613 (30%), Positives = 309/613 (50%), Gaps = 44/613 (7%)
Query: 8 SLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQ 67
+L EAL AY + + + + +A ++S C SL + G +V +++S Q
Sbjct: 421 ALSSNGYLEEALRAYRQMRRD-GVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQ 479
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
V + N ++ M+G G + DA FD+M + + +SW AMI+ S + ++ M
Sbjct: 480 NQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDM 539
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
G+ P T S++ C+ G +H+ ++S S + NAL+ MY+ ++
Sbjct: 540 RHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL 599
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
DA +F ++R+D+ SW +MI+++ + +AL ++ H PN F S A
Sbjct: 600 SDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNE-SPNHLTFSSALGA 658
Query: 248 CSNF----------------------------------------ARILFNEIDSPDLASW 267
CS+ A +F + + D+ S+
Sbjct: 659 CSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSY 718
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYII 326
N LI G A + +AM +FS MR + P+ +T+ ++ + L+ G +H+YII
Sbjct: 719 NVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYII 778
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+ GF S+ V N+++TMYAKC L ++ +F + N + VSWN+IIAA +Q EE
Sbjct: 779 RTGFLSDEYVANSLITMYAKCGNLESSTNIFNSI-TNKNIVSWNAIIAANVQLGHGEEAL 837
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
+LF M + K D + + + +CA +ASLE QLH K+GL D +V+N MD+Y
Sbjct: 838 KLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMY 897
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KCG + ++ W++LI GYA++G EA + F +M + G P+ VT V
Sbjct: 898 GKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFV 957
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
+L+ACSH GLV++G+ Y M + +G+ P +HC C+VDLL R G EAE FI +M
Sbjct: 958 ALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPV 1017
Query: 567 DADIVVWKSLLAS 579
+ ++W+SLL+S
Sbjct: 1018 LPNDLIWRSLLSS 1030
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 155/531 (29%), Positives = 260/531 (48%), Gaps = 46/531 (8%)
Query: 39 AGLISACSSL---RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
A L++AC + G +H + +V + +L++YG G + DA+ F +
Sbjct: 347 ASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWE 406
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP+RNVVSWTA++ S N +A++ Y QM + GV F +++ C L + G
Sbjct: 407 MPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPG 466
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
Q+ + VI S + + N+LI M+ R+ DA +F + D SW +MI+ +S
Sbjct: 467 LQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQ 526
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G + F++M HHG +P+ S+ S C++
Sbjct: 527 GICSKCFLVFSDMRHHG-LRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTV 585
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A LF + DL SWN +I+ + N+ +A+ ++
Sbjct: 586 INALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNE 645
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ LT S L AC L G VH+ ++++ N+ V N+++TMY KC+ + +A
Sbjct: 646 SPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEK 705
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF+ + + D VS+N +I + ++FS M ++ IKP++IT ++ G+ A
Sbjct: 706 VFQSMPTH-DIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSN 764
Query: 416 SLEMVTQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
L + LH YI +TG D +V N L+ +Y KCG+L S+ +FN + N ++VSW+++I
Sbjct: 765 DLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAII 824
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
Q G G+EALKLF M+ G + V L L++C+ + +EEG+ L+
Sbjct: 825 AANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLH 875
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/534 (25%), Positives = 249/534 (46%), Gaps = 54/534 (10%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG-- 150
FD+M R +W ++GC + A ++ M + GV F S++ AC G
Sbjct: 300 FDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRD 359
Query: 151 -SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
+ G +HA ++ ++ AL+ +Y + DA+ +F + ++V SW +++
Sbjct: 360 EGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALM 419
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQP-NEFIFGSVFSAC-------------------- 248
A S GY EAL + +M G P N F +V S C
Sbjct: 420 VALSSNGYLEEALRAYRQMRRDGV--PCNANAFATVVSLCGSLENEVPGLQVASQVIVSG 477
Query: 249 ---------------SNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
N R+ LF+ ++ D SWNA+I+ + ++ +FS
Sbjct: 478 LQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFS 537
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+MR L PD T+ SL+ C G +HS ++ DS+V V NA++ MY+
Sbjct: 538 DMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAG 597
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
L +A +F + + D +SWN++I++ +Q+ + + + ++ + P+H+TF+ +
Sbjct: 598 KLSDAEFLFWNMSRR-DLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSAL 656
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
GAC+ +L +H + + L ++ V N L+ +Y KC S+ A K+F M D+V
Sbjct: 657 GACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIV 716
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV---GVLTACSHVGLVEEGLHLY 525
S++ LI GYA G +A+++F+ MRS G+ PN +T++ G + + + LH Y
Sbjct: 717 SYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAY 776
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
I G + + ++ + A+ G + + + N + + +IV W +++A+
Sbjct: 777 II---RTGFLSDEYVANSLITMYAKCGNLESSTNIFNSIT-NKNIVSWNAIIAA 826
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 156/333 (46%), Gaps = 16/333 (4%)
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR-- 312
LF+E+ ++W ++G + +A + MR+ + G + SL+ AC R
Sbjct: 299 LFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGR 358
Query: 313 -LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+ G +H+ + G NV + A+L +Y ++ +A +F E+ + + VSW +
Sbjct: 359 DEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPER-NVVSWTA 417
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
++ A + EE R + +M + + F V+ C + + Q+ + +G
Sbjct: 418 LMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSG 477
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
L V V N L+ ++ G + A KLF+ ME D +SW+++I Y+ G + +F+
Sbjct: 478 LQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFS 537
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI-----MENEYGIIPTREHCSCVVD 546
MR G+ P+ TL +++ C+ G ++ + +++ +I + +V+
Sbjct: 538 DMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVI------NALVN 591
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + AG + +AE M+ D++ W ++++S
Sbjct: 592 MYSAAGKLSDAEFLFWNMS-RRDLISWNTMISS 623
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 189/623 (30%), Positives = 320/623 (51%), Gaps = 47/623 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +SS + LY+E L + + T++ TY +I AC+ + + +G VH ++
Sbjct: 510 NAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVV 569
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ DV + N +++ YG G + DA FD MP+RN+VSW +MI S N ++
Sbjct: 570 KTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFL 629
Query: 123 LYIQMLQS----GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
L +M++ MP T +++ C+ + LG+ +H +K L+ NAL+
Sbjct: 630 LLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALM 689
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML--------- 229
MY+K I +A+ +F K+V SW +M+ FS G +ML
Sbjct: 690 DMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKAD 749
Query: 230 -----------HHGAYQPN-----------EFIFGSV--------FSACSN--FARILFN 257
H ++ P+ EF++ + ++ C + +A+ +F+
Sbjct: 750 EVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFH 809
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
I S + SWNALI G A ++ ++ +M+ LLPD TV SLL AC +L
Sbjct: 810 GIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRL 869
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G +VH +II+ + ++ V ++L++Y C LC +F + ++ VSWN++I L
Sbjct: 870 GKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM-EDKSLVSWNTVITGYL 928
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
Q+ + +F +M+ I+ I+ V GAC+ + SL + + H Y K L D F
Sbjct: 929 QNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAF 988
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
+ L+D+Y K GS+ + K+FN ++ SW+++I+GY G EA+KLF M+ G
Sbjct: 989 IACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTG 1048
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
+P+ +T +GVLTAC+H GL+ EGL M++ +G+ P +H +CV+D+L RAG + +A
Sbjct: 1049 HNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKA 1108
Query: 558 EDFI-NQMACDADIVVWKSLLAS 579
+ +M+ +AD+ +WKSLL+S
Sbjct: 1109 LRVVAEEMSEEADVGIWKSLLSS 1131
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/590 (25%), Positives = 281/590 (47%), Gaps = 62/590 (10%)
Query: 41 LISACSSLRSLQLGRKVHDHILLS-KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR 99
L+ A + +++GRK+H + S + + D VL I+ MY CGS +D+R FD + +
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGLGSVCLGRQL 158
N+ W A+I+ S+N ++ ++ +I+M+ + ++P FT+ +IKAC+G+ V +G +
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H V+K+ + NAL++ Y + DA +F + +++ SW SMI FS G+
Sbjct: 565 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624
Query: 219 LEALCHFNEMLHH---GAYQPNEFIFGSVFSACSNF------------------------ 251
E+ EM+ GA+ P+ +V C+
Sbjct: 625 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 684
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM--RDR 293
A+++F ++ ++ SWN ++ G ++ + + + +M
Sbjct: 685 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 744
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
++ D +T+ + + C L ++H Y +K F N V NA + YAKC L A
Sbjct: 745 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 804
Query: 354 LLVFKELGKNADSV-SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
VF G + +V SWN++I Q N +M S + PD T ++ AC+
Sbjct: 805 QRVFH--GIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 862
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
K+ SL + ++H +I + L D+FV ++ +YI CG L + + LF+ ME+ +VSW++
Sbjct: 863 KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNT 922
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS-----HVGLVEEGLHLYRI 527
+I GY Q G D AL +F +M G+ ++++ V ACS +G L +
Sbjct: 923 VITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHL 982
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+E++ I CS ++D+ A+ G + ++ N + + W +++
Sbjct: 983 LEDDAFIA-----CS-LIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMI 1025
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 192/424 (45%), Gaps = 48/424 (11%)
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGI 197
G +++A + +GR++H V S + + +I MY D+R VF +
Sbjct: 442 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 501
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--- 254
K++ W ++I+++S+ E L F EM+ P+ F + V AC+ + +
Sbjct: 502 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 561
Query: 255 -------------------------------------LFNEIDSPDLASWNALIAGVASH 277
LF+ + +L SWN++I + +
Sbjct: 562 LAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDN 621
Query: 278 SNANEAMSLFSEMR----DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
+ E+ L EM D +PD T+ ++L C + G VH + +K+ D
Sbjct: 622 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE 681
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
+ + NA++ MY+KC + NA ++FK + N + VSWN+++ F + +ML
Sbjct: 682 LVLNNALMDMYSKCGCITNAQMIFK-MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 740
Query: 394 A--SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
A +K D +T + + C + L + +LHCY K ++ V N + Y KCGS
Sbjct: 741 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 800
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
L A+++F+ + + V SW++LI G+AQ +L +M+ G+ P+ T+ +L+A
Sbjct: 801 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 860
Query: 512 CSHV 515
CS +
Sbjct: 861 CSKL 864
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 180/398 (45%), Gaps = 49/398 (12%)
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
++ N + Y KCGSL A+ F + + V SW A+I G +Q+ ++ ++QM S
Sbjct: 786 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 845
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G++P FT S++ ACS L S+ LG+++H +I++ L +++++Y +
Sbjct: 846 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 905
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG------------------ 232
+ +F + K + SW ++I + + G+ AL F +M+ +G
Sbjct: 906 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLL 965
Query: 233 ----------AYQPNEFIFGSVFSACS-----------NFARILFNEIDSPDLASWNALI 271
AY + F ACS + +FN + ASWNA+I
Sbjct: 966 PSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMI 1025
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM--- 328
G H A EA+ LF EM+ PD LT +L AC +++G++ Y+ +M
Sbjct: 1026 MGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLR---YLDQMKSS 1082
Query: 329 -GFDSNVPVCNAILTMYAKCSVLCNAL-LVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
G N+ ++ M + L AL +V +E+ + AD W S++++C H E
Sbjct: 1083 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 1142
Query: 387 RLFSRM--LASQIKPDHITFNDVMGACAKMASLEMVTQ 422
++ +++ L + +++ +++ K + V Q
Sbjct: 1143 KVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQ 1180
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 152/307 (49%), Gaps = 23/307 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T L+SACS L+SL+LG++VH I+ + + D+ + +L++Y CG L + FD M
Sbjct: 853 TVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM 912
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+++VSW +I G QN + A+ ++ QM+ G+ + + ACS L S+ LGR
Sbjct: 913 EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGR 972
Query: 157 QLHAHVIKSEHGSHLIAQNALIA-----MYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ HA+ +K HL+ +A IA MY K I + VF+G+ K SW +MI
Sbjct: 973 EAHAYALK-----HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 1027
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS----- 261
+ G EA+ F EM G + P++ F V +AC++ I +++ S
Sbjct: 1028 YGIHGLAKEAIKLFEEMQRTG-HNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLK 1086
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
P+L + +I + ++A+ + +E E D SLL +C L G +V
Sbjct: 1087 PNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE--ADVGIWKSLLSSCRIHQNLEMGEKV 1144
Query: 322 HSYIIKM 328
+ + ++
Sbjct: 1145 AAKLFEL 1151
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 185/587 (31%), Positives = 305/587 (51%), Gaps = 43/587 (7%)
Query: 34 RPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
+ + Y L+ + +SL +++H H++ S + +++ ++ Y CG + +AR F
Sbjct: 20 KTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLL-SIDIRSVLVATYAHCGYVHNARKLF 78
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGLGSV 152
D++ QR + + MI +A+K++++ML S P +T+ +IKACS L V
Sbjct: 79 DELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLV 138
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
GR LH + S+ GSHL N+L+AMY + +AR VF + K V SW +MI +
Sbjct: 139 EYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGY 198
Query: 213 SKLGYELEALCHFNEMLHHG---------AYQP------------------NEFIFGS-- 243
K G+ AL FN+M+ G + P E + G
Sbjct: 199 FKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKI 258
Query: 244 -------VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+++ C + AR++F+ + D+ SW ++I G + +A A+SLF M+
Sbjct: 259 VSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEG 318
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
L P+ +T+ +L AC L G +H +++K S V V +++ MYAKC+ L +
Sbjct: 319 LRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSF 378
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
VF + +V WN++++ C+ + A E LF +ML ++ + T N ++ A +
Sbjct: 379 SVFTRTSRK-KTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGIL 437
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM--ENPDVVSWSS 472
A L+ V ++ Y+ ++G ++ V L+DIY KCGSL SA K+FN + + D+ WS
Sbjct: 438 ADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSI 497
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
+I GY G G+ A+ LF +M GV PN VT VL +CSH G+V++GL+L++ M ++
Sbjct: 498 IIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDH 557
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
IP +H +C+VDLL RAG + EA D I M VW +LL +
Sbjct: 558 QTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGA 604
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 198/427 (46%), Gaps = 52/427 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ K N ALV ++ ++ + I ++ ++ AC L+ L++GR+VH ++
Sbjct: 192 NTMINGYFKNGFANTALVVFN-QMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHG-LV 249
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
K ++ N +++MY KCGS+++AR+ FD M +R+VVSWT+MI G N A+
Sbjct: 250 EEKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALS 309
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ M G+ P T I+ AC+ L ++ GR LH V+K S + + +LI MY
Sbjct: 310 LFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYA 369
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG---------- 232
K + + + +VF+ +RK W ++++ EA+ F +ML G
Sbjct: 370 KCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNS 429
Query: 233 ---AY------QP----NEFIFGS--------------VFSACSNF--ARILFNEI--DS 261
AY QP N ++ S ++S C + A +FN I D
Sbjct: 430 LLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDV 489
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
D+ W+ +IAG H + A+SLF +M + P+ +T S+L +C + G+ +
Sbjct: 490 QDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYL 549
Query: 322 HSYIIKMGFDSNVP-----VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+++K +P C ++ + + + A + K + W +++ AC
Sbjct: 550 FKFMLK--DHQTIPNDDHYTC--MVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGAC 605
Query: 377 LQHNQAE 383
+ H E
Sbjct: 606 VMHENVE 612
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 149/284 (52%), Gaps = 6/284 (2%)
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
L P SLL +L Q+H+++I G S + + + ++ YA C + NA
Sbjct: 17 LAPKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLLS-IDIRSVLVATYAHCGYVHNAR 75
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ-IKPDHITFNDVMGACAK 413
+F EL + ++ +N +I + E ++F ML S+ PD+ T+ V+ AC++
Sbjct: 76 KLFDEL-RQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSE 134
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ +E LH + +FV+N L+ +Y+ CG + ARK+F+ M+ VVSW+++
Sbjct: 135 LLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTM 194
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I GY + G + AL +F +M GV + ++V VL AC ++ +E G ++ ++E +
Sbjct: 195 INGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEK-- 252
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
++ + + +VD+ A+ G + EA + M + D+V W S++
Sbjct: 253 VLGKKIVSNALVDMYAKCGSMDEARLVFDNMV-ERDVVSWTSMI 295
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 187/596 (31%), Positives = 300/596 (50%), Gaps = 48/596 (8%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
+R T+ ++ AC+ L L GR +H I+ S + VL N +L++YG CG +
Sbjct: 120 QQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCV 179
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
A + F++M +R++VSW A IA +Q+ + A++L+ +M GV P + T + C
Sbjct: 180 ASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVC 238
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
+ + R +H+ V +S L+ AL + Y + + A+ VF A +DV SW
Sbjct: 239 AKIRQ---ARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWN 295
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN--FARI---------- 254
+M+ A+++ G+ EA F MLH G P++ + + CS+ F R+
Sbjct: 296 AMLGAYAQHGHMSEAALLFARMLHEG-IPPSKVTLVNASTGCSSLRFGRMIHACALEKGL 354
Query: 255 ------------LFNEIDSPDLA------------SWNALIAGVASHSNANEAMSLFSEM 290
++ SP+ A SWN +IAG + A+ LF M
Sbjct: 355 DRDIVLGNALLDMYTRCGSPEEARHLFEGIPGNAVSWNTMIAGSSQKGQMKRALELFQRM 414
Query: 291 RDRELLPDGLTVHSLLCACIGR----LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
+ + P T +LL A + +G ++HS I+ G+ S + A++ MYA
Sbjct: 415 QLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYAS 474
Query: 347 CSVLCNALLVFKE--LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
C + A F+ + D VSWN+II++ QH + F RM + P+ IT
Sbjct: 475 CGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITC 534
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME- 463
V+ ACA A+L +H ++ +G+ +VFV L +Y +CGSL SAR++F +
Sbjct: 535 VAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAV 594
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
DVV ++++I Y+Q G EALKLF RM+ G P+ + V VL+ACSH GL +EG
Sbjct: 595 ERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWE 654
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++R M YGI P+ +H +C VD+L RAG + +AE+ I M ++VWK+LL +
Sbjct: 655 IFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGA 710
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 164/590 (27%), Positives = 278/590 (47%), Gaps = 54/590 (9%)
Query: 34 RPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
RP+ L+ A R L GR++H I+ + + L NH+L +Y KC SL D F
Sbjct: 28 RPAHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVF 85
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
++ R+ SWT +I +++ Q AI ++ +M Q GV TF +++KAC+ LG +
Sbjct: 86 SRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLS 145
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
GR +HA +++S + N L+ +Y + A +F + R D+ SW + IAA +
Sbjct: 146 QGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERMER-DLVSWNAAIAANA 204
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC------------------------- 248
+ G AL F M G +P S C
Sbjct: 205 QSGDLDMALELFQRMQLEGV-RPARITLVITLSVCAKIRQARAIHSIVRESGLEQTLVVS 263
Query: 249 ----SNFARI--------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
S +AR+ +F+ D+ SWNA++ A H + +EA LF+ M +
Sbjct: 264 TALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIP 323
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P +T L+ A G +L G +H+ ++ G D ++ + NA+L MY +C A +
Sbjct: 324 PSKVT---LVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHL 380
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA---- 412
F+ + NA VSWN++IA Q Q + LF RM + P T+ +++ A A
Sbjct: 381 FEGIPGNA--VSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPE 438
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN--FMENP-DVVS 469
+ ++ +LH I G A + + ++ +Y CG++ A F ME+ DVVS
Sbjct: 439 EARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVS 498
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+++I +Q G G AL F RM GV+PN +T V VL AC+ + EG+ ++ +
Sbjct: 499 WNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLR 558
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ G+ + + + R G + A + ++A + D+V++ +++A+
Sbjct: 559 HS-GMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 184/592 (31%), Positives = 310/592 (52%), Gaps = 44/592 (7%)
Query: 29 TNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
+ I + T+ ++ AC L+ + G +VH + V + N I+ MY KC L
Sbjct: 210 SGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNG 269
Query: 89 ARMGFDKMPQR-NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
AR FD+MP++ +VVSW +MI+ S N Q +A++L+ +M ++ + P +TF + ++AC
Sbjct: 270 ARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACE 329
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
+ G +HA V+KS + ++ NALIAMY +F ++ +A N+F + D SW S
Sbjct: 330 DSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNS 389
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA-------------------- 247
M++ F + G EAL ++EM G +P+ S+ +A
Sbjct: 390 MLSGFVQNGLYHEALQFYHEMRDAGQ-KPDLVAVISIIAASARSGNTLNGMQIHAYAMKN 448
Query: 248 -------------------CS-NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
CS + +F+++ D+ SW +IAG A + + + A+ LF
Sbjct: 449 GLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELF 508
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
E++ + D + + S+L AC G + ++HSYII+ G S++ + N I+ +Y +C
Sbjct: 509 REVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGEC 567
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
+ A +F EL + D VSW S+I+ + + A E LF M + ++PD I+ +
Sbjct: 568 GNVDYAARMF-ELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSI 626
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
+ A A +++L+ ++H ++ + G + + + L+D+Y +CG+L +R +FNF+ N D+
Sbjct: 627 LSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDL 686
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
V W+S+I Y GCG A+ LF RM ++P+ + V VL ACSH GL+ EG
Sbjct: 687 VLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLES 746
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M+ EY + P EH C+VDLL RA + EA F+ M + VW +LL +
Sbjct: 747 MKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGA 798
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 183/616 (29%), Positives = 314/616 (50%), Gaps = 49/616 (7%)
Query: 6 VSSLCKQNLYNEALVAYD--FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILL 63
+ +CK+ NEA + F+ + + Y+ ++ C S ++L G++VH H++
Sbjct: 83 LREICKRGSVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMIT 142
Query: 64 SKCQPD-VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S + V L ++ MYGKCG L DA FD MP + + +W AMI N + +++
Sbjct: 143 SNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLE 202
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
LY +M SG+ TF I+KAC L G ++H IK + S + N+++ MYT
Sbjct: 203 LYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYT 262
Query: 183 KFDRILDARNVFSGIARK-DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K + + AR +F + K DV SW SMI+A+S G +EAL F EM + PN + F
Sbjct: 263 KCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEM-QKASLAPNTYTF 321
Query: 242 GSVFSACSN--------------------------------FARI--------LFNEIDS 261
+ AC + +AR +F +D
Sbjct: 322 VAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDD 381
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
D SWN++++G + +EA+ + EMRD PD + V S++ A GMQ+
Sbjct: 382 WDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQI 441
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H+Y +K G DS++ V N+++ MYAK + +F ++ + D VSW +IIA Q+
Sbjct: 442 HAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKM-PDKDVVSWTTIIAGHAQNGS 500
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
LF + I D + + ++ AC+ + + V ++H YI + GL+ D+ + NG
Sbjct: 501 HSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNG 559
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
++D+Y +CG++ A ++F +E DVVSW+S+I Y G +EAL+LF M+ GV P+
Sbjct: 560 IVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPD 619
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
++LV +L+A + + +++G ++ + + G + S +VD+ AR G + ++ +
Sbjct: 620 SISLVSILSAAASLSALKKGKEIHGFLIRK-GFVLEGSLASTLVDMYARCGTLEKSRNVF 678
Query: 562 NQMACDADIVVWKSLL 577
N + + D+V+W S++
Sbjct: 679 NFIR-NKDLVLWTSMI 693
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 177/342 (51%), Gaps = 8/342 (2%)
Query: 239 FIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
F++G C A LF+ + + +WNA+I ++ ++ L+ EMR + D
Sbjct: 158 FMYGKC--GCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLD 215
Query: 299 GLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
T +L AC G L + G +VH IK G+ S V V N+I+ MY KC+ L A +F
Sbjct: 216 ACTFPCILKAC-GLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLF 274
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+ + D VSWNS+I+A + Q+ E RLF M + + P+ TF + AC + +
Sbjct: 275 DRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFI 334
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
+ +H + K+ +VFV N L+ +Y + G +G A +F M++ D +SW+S++ G+
Sbjct: 335 KQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGF 394
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI-MENEYGIIP 536
Q G EAL+ + MR G P+LV ++ ++ A + G G+ ++ M+N G+
Sbjct: 395 VQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKN--GLDS 452
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ + +VD+ A+ C + D I D D+V W +++A
Sbjct: 453 DLQVGNSLVDMYAKF-CSMKYMDCIFDKMPDKDVVSWTTIIA 493
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 180/580 (31%), Positives = 300/580 (51%), Gaps = 43/580 (7%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
+IS+C L+ LGR++ ++ S + + ++N +++M G G+++ A FD+M +R+
Sbjct: 149 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERD 208
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+SW ++ A +QN ++ +++ M + T +++ + GR +H
Sbjct: 209 TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 268
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
V+K S + N L+ MY R ++A VF + KD+ SW S++A+F G L+
Sbjct: 269 LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLD 328
Query: 221 ALCHFNEMLHHGA--------------YQPNEFIFGSVFSACSNFARILFNEI------- 259
AL M+ G + P+ F G + + + +N+I
Sbjct: 329 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 388
Query: 260 ------------------DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
D+ +WNALI G A + ++A++ F MR + + +T
Sbjct: 389 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 448
Query: 302 VHSLLCACI--GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
V S+L AC+ G L L +G +H+YI+ GF+S+ V N+++TMYAKC L ++ +F
Sbjct: 449 VVSVLSACLLPGDL-LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 507
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
L N + ++WN+++AA H EE+ +L S+M + + D +F++ + A AK+A LE
Sbjct: 508 L-DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEE 566
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
QLH K G D F+ N D+Y KCG +G K+ N + SW+ LI +
Sbjct: 567 GQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGR 626
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTRE 539
G +E F M +G+ P VT V +LTACSH GLV++GL Y ++ ++G+ P E
Sbjct: 627 HGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIE 686
Query: 540 HCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
HC CV+DLL R+G + EAE FI++M + +VW+SLLAS
Sbjct: 687 HCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLAS 726
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 158/566 (27%), Positives = 273/566 (48%), Gaps = 47/566 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTY--AGLISACSSLRSL-QLGRKVHD 59
N +S + + LY E + +F + ++ I+PS++ A L++AC S+ + G +VH
Sbjct: 10 NTMMSGIVRVGLYLEGM---EFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 66
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
+ S DV + IL++YG G + +R F++MP RNVVSWT+++ G S + +
Sbjct: 67 FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 126
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
I +Y M GV + + +I +C L LGRQ+ V+KS S L +N+LI+
Sbjct: 127 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLIS 186
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM----------- 228
M + A +F ++ +D SW S+ AA+++ G+ E+ F+ M
Sbjct: 187 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 246
Query: 229 -------LHHGAYQP---------NEFIFGSVFSACSNFAR------------ILFNEID 260
L H +Q + F SV C+ R ++F ++
Sbjct: 247 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 306
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ DL SWN+L+A + + +A+ L M + +T S L AC +G
Sbjct: 307 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 366
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H ++ G N + NA+++MY K + + V ++ + D V+WN++I +
Sbjct: 367 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR-DVVAWNALIGGYAEDE 425
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS-LEMVTQLHCYITKTGLAFDVFVM 439
++ F M + ++IT V+ AC LE LH YI G D V
Sbjct: 426 DPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK 485
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
N L+ +Y KCG L S++ LFN ++N ++++W++++ A G G+E LKL ++MRS GVS
Sbjct: 486 NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 545
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLY 525
+ + L+A + + ++EEG L+
Sbjct: 546 LDQFSFSEGLSAAAKLAVLEEGQQLH 571
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 177/384 (46%), Gaps = 41/384 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++AC + + GR +H +++S + ++ N +++MYGK G + ++R +M
Sbjct: 347 TFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM 406
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC-LG 155
P+R+VV+W A+I G +++ + A+ + M GV T S++ AC G + G
Sbjct: 407 PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 466
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ LHA+++ + S +N+LI MY K + ++++F+G+ +++ +W +M+AA +
Sbjct: 467 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHH 526
Query: 216 GYELEALCHFNEMLHHG----------------------------------AYQPNEFIF 241
G+ E L ++M G ++ + FIF
Sbjct: 527 GHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIF 586
Query: 242 GS---VFSACSNFARI--LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+ ++S C + + + L SWN LI+ + H E + F EM + +
Sbjct: 587 NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIK 646
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALL 355
P +T SLL AC + +G+ + I + G + + C ++ + + L A
Sbjct: 647 PGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAET 706
Query: 356 VFKELGKNADSVSWNSIIAACLQH 379
++ + + W S++A+C H
Sbjct: 707 FISKMPMKPNDLVWRSLLASCKIH 730
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 155/315 (49%), Gaps = 4/315 (1%)
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY-QGMQVHSY 324
SWN +++G+ E M F +M D + P + SL+ AC +++ +G+QVH +
Sbjct: 8 SWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGF 67
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
+ K G S+V V AIL +Y ++ + VF+E+ + + VSW S++ + EE
Sbjct: 68 VAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM-PDRNVVSWTSLMVGYSDKGEPEE 126
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
+ ++ M + + + + V+ +C + + Q+ + K+GL + V N L+
Sbjct: 127 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLIS 186
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+ G++ A +F+ M D +SW+S+ YAQ G +E+ ++F+ MR N T
Sbjct: 187 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 246
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
+ +L+ HV + G ++ ++ + G C+ ++ + A AG EA QM
Sbjct: 247 VSTLLSVLGHVDHQKWGRGIHGLVV-KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM 305
Query: 565 ACDADIVVWKSLLAS 579
D++ W SL+AS
Sbjct: 306 PT-KDLISWNSLMAS 319
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 180/420 (42%), Gaps = 45/420 (10%)
Query: 200 KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------- 251
++ SW +M++ ++G LE + F +M G +P+ F+ S+ +AC
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLG-IKPSSFVIASLVTACGRSGSMFREGV 62
Query: 252 ---------------------------------ARILFNEIDSPDLASWNALIAGVASHS 278
+R +F E+ ++ SW +L+ G +
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
E + ++ MR + + ++ ++ +C G Q+ ++K G +S + V N
Sbjct: 123 EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVEN 182
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
++++M + A +F ++ + D++SWNSI AA Q+ EE FR+FS M +
Sbjct: 183 SLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
+ T + ++ + + +H + K G V V N L+ +Y G A +
Sbjct: 242 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 301
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
F M D++SW+SL+ + G +AL L M S G S N VT L AC
Sbjct: 302 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 361
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
E+G L+ ++ G+ + + +V + + G + E+ + QM D+V W +L+
Sbjct: 362 EKGRILHGLVVVS-GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIG 419
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 156/336 (46%), Gaps = 25/336 (7%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
L+ G+ +H +I+ + + D ++N ++ MY KCG L ++ F+ + RN+++W AM+A
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 522
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK--SEHG 168
+ + + +KL +M GV QF+F + A + L + G+QLH +K EH
Sbjct: 523 NAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHD 582
Query: 169 SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
S + NA MY+K I + + + + SW +I+A + GY E F+EM
Sbjct: 583 SFIF--NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEM 640
Query: 229 LHHGAYQPNEFIFGSVFSACSNFARI----LFNEIDSPDLASWNAL------IAGVASHS 278
L G +P F S+ +ACS+ + + ++ + D A+ I +
Sbjct: 641 LEMG-IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSG 699
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVC 337
EA + S+M + P+ L SLL +C L +G + + K+ D +V V
Sbjct: 700 RLAEAETFISKM---PMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVL 756
Query: 338 NAILTMYAKCSVLCNALLVFKELG----KNADSVSW 369
++ M+A + V K++G K + SW
Sbjct: 757 SS--NMFATTGRWEDVENVRKQMGFKNIKKKQACSW 790
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 113/218 (51%), Gaps = 7/218 (3%)
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-EMVTQL 423
+ VSWN++++ ++ E F +M IKP ++ AC + S+ Q+
Sbjct: 5 NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQV 64
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H ++ K+GL DV+V ++ +Y G + +RK+F M + +VVSW+SL++GY+ G
Sbjct: 65 HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEP 124
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN--EYGIIPTREHC 541
+E + ++ MR GV N ++ V+++C GL+++ +I+ + G+
Sbjct: 125 EEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKSGLESKLAVE 181
Query: 542 SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++ +L G V A +QM+ + D + W S+ A+
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAA 218
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 180/580 (31%), Positives = 300/580 (51%), Gaps = 43/580 (7%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
+IS+C L+ LGR++ ++ S + + ++N +++M G G+++ A FD+M +R+
Sbjct: 166 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERD 225
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+SW ++ A +QN ++ +++ M + T +++ + GR +H
Sbjct: 226 TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 285
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
V+K S + N L+ MY R ++A VF + KD+ SW S++A+F G L+
Sbjct: 286 LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLD 345
Query: 221 ALCHFNEMLHHGA--------------YQPNEFIFGSVFSACSNFARILFNEI------- 259
AL M+ G + P+ F G + + + +N+I
Sbjct: 346 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 405
Query: 260 ------------------DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
D+ +WNALI G A + ++A++ F MR + + +T
Sbjct: 406 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 465
Query: 302 VHSLLCACI--GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
V S+L AC+ G L L +G +H+YI+ GF+S+ V N+++TMYAKC L ++ +F
Sbjct: 466 VVSVLSACLLPGDL-LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 524
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
L N + ++WN+++AA H EE+ +L S+M + + D +F++ + A AK+A LE
Sbjct: 525 L-DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEE 583
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
QLH K G D F+ N D+Y KCG +G K+ N + SW+ LI +
Sbjct: 584 GQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGR 643
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTRE 539
G +E F M +G+ P VT V +LTACSH GLV++GL Y ++ ++G+ P E
Sbjct: 644 HGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIE 703
Query: 540 HCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
HC CV+DLL R+G + EAE FI++M + +VW+SLLAS
Sbjct: 704 HCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLAS 743
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 158/566 (27%), Positives = 273/566 (48%), Gaps = 47/566 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTY--AGLISACSSLRSL-QLGRKVHD 59
N +S + + LY E + +F + ++ I+PS++ A L++AC S+ + G +VH
Sbjct: 27 NTMMSGIVRVGLYLEGM---EFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 83
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
+ S DV + IL++YG G + +R F++MP RNVVSWT+++ G S + +
Sbjct: 84 FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 143
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
I +Y M GV + + +I +C L LGRQ+ V+KS S L +N+LI+
Sbjct: 144 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLIS 203
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM----------- 228
M + A +F ++ +D SW S+ AA+++ G+ E+ F+ M
Sbjct: 204 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 263
Query: 229 -------LHHGAYQP---------NEFIFGSVFSACSNFAR------------ILFNEID 260
L H +Q + F SV C+ R ++F ++
Sbjct: 264 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 323
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ DL SWN+L+A + + +A+ L M + +T S L AC +G
Sbjct: 324 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 383
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H ++ G N + NA+++MY K + + V ++ + D V+WN++I +
Sbjct: 384 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR-DVVAWNALIGGYAEDE 442
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS-LEMVTQLHCYITKTGLAFDVFVM 439
++ F M + ++IT V+ AC LE LH YI G D V
Sbjct: 443 DPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK 502
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
N L+ +Y KCG L S++ LFN ++N ++++W++++ A G G+E LKL ++MRS GVS
Sbjct: 503 NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 562
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLY 525
+ + L+A + + ++EEG L+
Sbjct: 563 LDQFSFSEGLSAAAKLAVLEEGQQLH 588
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 193/440 (43%), Gaps = 45/440 (10%)
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MYTKF R+ AR++F + ++ SW +M++ ++G LE + F +M G +P+ F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLG-IKPSSF 59
Query: 240 IFGSVFSACSNF-----------------------------------------ARILFNE 258
+ S+ +AC +R +F E
Sbjct: 60 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ ++ SW +L+ G + E + ++ MR + + ++ ++ +C G
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
Q+ ++K G +S + V N++++M + A +F ++ + D++SWNSI AA Q
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAAAYAQ 238
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+ EE FR+FS M + + T + ++ + + +H + K G V V
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
N L+ +Y G A +F M D++SW+SL+ + G +AL L M S G
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAE 558
S N VT L AC E+G L+ ++ G+ + + +V + + G + E+
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVS-GLFYNQIIGNALVSMYGKIGEMSESR 417
Query: 559 DFINQMACDADIVVWKSLLA 578
+ QM D+V W +L+
Sbjct: 418 RVLLQMP-RRDVVAWNALIG 436
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 177/384 (46%), Gaps = 41/384 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++AC + + GR +H +++S + ++ N +++MYGK G + ++R +M
Sbjct: 364 TFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM 423
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC-LG 155
P+R+VV+W A+I G +++ + A+ + M GV T S++ AC G + G
Sbjct: 424 PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 483
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ LHA+++ + S +N+LI MY K + ++++F+G+ +++ +W +M+AA +
Sbjct: 484 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHH 543
Query: 216 GYELEALCHFNEMLHHG----------------------------------AYQPNEFIF 241
G+ E L ++M G ++ + FIF
Sbjct: 544 GHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIF 603
Query: 242 GS---VFSACSNFARI--LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+ ++S C + + + L SWN LI+ + H E + F EM + +
Sbjct: 604 NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIK 663
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALL 355
P +T SLL AC + +G+ + I + G + + C ++ + + L A
Sbjct: 664 PGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAET 723
Query: 356 VFKELGKNADSVSWNSIIAACLQH 379
++ + + W S++A+C H
Sbjct: 724 FISKMPMKPNDLVWRSLLASCKIH 747
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 162/329 (49%), Gaps = 4/329 (1%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR LF+ + + SWN +++G+ E M F +M D + P + SL+ AC
Sbjct: 11 ARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR 70
Query: 312 RLTLY-QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
+++ +G+QVH ++ K G S+V V AIL +Y ++ + VF+E+ + + VSW
Sbjct: 71 SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM-PDRNVVSWT 129
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
S++ + EE+ ++ M + + + + V+ +C + + Q+ + K+
Sbjct: 130 SLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS 189
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
GL + V N L+ + G++ A +F+ M D +SW+S+ YAQ G +E+ ++F
Sbjct: 190 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 249
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
+ MR N T+ +L+ HV + G ++ ++ + G C+ ++ + A
Sbjct: 250 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV-KMGFDSVVCVCNTLLRMYAG 308
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
AG EA QM D++ W SL+AS
Sbjct: 309 AGRSVEANLVFKQMPT-KDLISWNSLMAS 336
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 156/336 (46%), Gaps = 25/336 (7%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
L+ G+ +H +I+ + + D ++N ++ MY KCG L ++ F+ + RN+++W AM+A
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 539
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK--SEHG 168
+ + + +KL +M GV QF+F + A + L + G+QLH +K EH
Sbjct: 540 NAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHD 599
Query: 169 SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
S + NA MY+K I + + + + SW +I+A + GY E F+EM
Sbjct: 600 SFIF--NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEM 657
Query: 229 LHHGAYQPNEFIFGSVFSACSNFARI----LFNEIDSPDLASWNAL------IAGVASHS 278
L G +P F S+ +ACS+ + + ++ + D A+ I +
Sbjct: 658 LEMG-IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSG 716
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVC 337
EA + S+M + P+ L SLL +C L +G + + K+ D +V V
Sbjct: 717 RLAEAETFISKM---PMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVL 773
Query: 338 NAILTMYAKCSVLCNALLVFKELG----KNADSVSW 369
++ M+A + V K++G K + SW
Sbjct: 774 SS--NMFATTGRWEDVENVRKQMGFKNIKKKQACSW 807
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/489 (32%), Positives = 268/489 (54%), Gaps = 34/489 (6%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F+ + + N++ W M G + + A+KLY+ M+ G++P +TF ++K+C+ +
Sbjct: 91 FETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAF 150
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+Q+H HV+K + L +LI++Y + R+ DAR VF +DV S+ ++I +
Sbjct: 151 KEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGY 210
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
+ GY +E+ A+ LF+EI D+ SWNA+I+
Sbjct: 211 ASRGY-IES------------------------------AQKLFDEIPVKDVVSWNAMIS 239
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A N EA+ LF EM + PD T+ +++ AC ++ G QVHS+I GF S
Sbjct: 240 GYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGS 299
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N+ + N+++ +Y+KC L A +F+ L D +SWN++I N +E LF M
Sbjct: 300 NLKIVNSLMDLYSKCGELETACGLFEGL-LYKDVISWNTLIGGYTHMNLYKEALLLFQEM 358
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFDVFVMNGLMDIYIKCG 450
L S +P+ +T ++ ACA + ++++ +H YI K + L+D+Y KCG
Sbjct: 359 LRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCG 418
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ +A ++FN + + + SW+++I G+A G D A +F+RMR +G+ P+ +T VG+L+
Sbjct: 419 DIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLS 478
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACS G+++ G H++R M +Y I P EH C++DLL +G EAE+ IN M + D
Sbjct: 479 ACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDG 538
Query: 571 VVWKSLLAS 579
V+W SLL +
Sbjct: 539 VIWCSLLKA 547
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 183/414 (44%), Gaps = 75/414 (18%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L+ +C+ ++ + G+++H H+L D+ + ++++Y + G LEDAR FD+
Sbjct: 136 TFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRS 195
Query: 97 PQRNVVS-------------------------------WTAMIAGCSQNYQENDAIKLYI 125
P R+VVS W AMI+G ++ +A++L+
Sbjct: 196 PHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M+++ + P + T +++ AC+ GS+ LGRQ+H+ + GS+L N+L+ +Y+K
Sbjct: 256 EMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCG 315
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A +F G+ KDV SW ++I ++ + EAL F EML G +PN+ S+
Sbjct: 316 ELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-RPNDVTMLSIL 374
Query: 246 SACSNFARI------------------------------------------LFNEIDSPD 263
AC++ I +FN I
Sbjct: 375 PACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 434
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
L+SWNA+I G A H A+ A +FS MR + PD +T LL AC L G +
Sbjct: 435 LSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFR 494
Query: 324 YIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+ + + ++ + + A + + D V W S++ AC
Sbjct: 495 TMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKAC 548
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 177/358 (49%), Gaps = 24/358 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + Y EAL + TNIR ST ++SAC+ S++LGR+VH I
Sbjct: 235 NAMISGYAETGNYKEALELFK-EMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWID 293
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ + N ++++Y KCG LE A F+ + ++V+SW +I G + +A+
Sbjct: 294 DHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALL 353
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK----SEHGSHLIAQNALI 178
L+ +ML+SG P T SI+ AC+ LG++ +GR +H ++ K + + S L + +LI
Sbjct: 354 LFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSL--RTSLI 411
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
MY K I A VF+ I K ++SW +MI F+ G A F+ M G +P++
Sbjct: 412 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGI-EPDD 470
Query: 239 FIFGSVFSACS-----NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLFS 288
F + SACS + R +F + +P L + +I + EA + +
Sbjct: 471 ITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMIN 530
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT-MYA 345
M E+ PDG+ SLL AC R + G +IK+ + P C +L+ +YA
Sbjct: 531 NM---EMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKI--EPENPGCYVLLSNIYA 583
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/554 (31%), Positives = 286/554 (51%), Gaps = 39/554 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ + AC + S++ G H ++ +V + N ++ MY +CGSL DAR FD+M
Sbjct: 129 TFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEM 188
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGLGSVCLG 155
P +VVSW ++I ++ + A++++ +M G P T +++ C+ +G+ LG
Sbjct: 189 PVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLG 248
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+Q H + SE ++ N L+ MY KF + +A VFS + KDV SW +M+A +S++
Sbjct: 249 KQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQI 308
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVA 275
G +A+ F +M E D+ +W+A I+G A
Sbjct: 309 GRFEDAVRLFEQMQ---------------------------EEKIKMDVVTWSAAISGYA 341
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD---- 331
EA+ + +M + P+ +T+ S+L C L G ++H Y IK D
Sbjct: 342 QRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKN 401
Query: 332 ---SNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQHNQAEELFR 387
V N ++ MYAKC + A +F L K D V+W +I QH A +
Sbjct: 402 GHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALE 461
Query: 388 LFSRMLAS--QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL-AFDVFVMNGLMD 444
L S M Q +P+ T + + ACA +A+L + Q+H Y + A +FV N L+D
Sbjct: 462 LLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLID 521
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y KCG +G AR +F+ M + V+W+SL+ GY G G+EAL +F MR +G + VT
Sbjct: 522 MYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVT 581
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
L+ VL ACSH G++++G+ + M+ ++G+ P EH +C+VDLL RAG ++ A I +M
Sbjct: 582 LLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641
Query: 565 ACDADIVVWKSLLA 578
+ VVW +LL+
Sbjct: 642 PMEPPPVVWVALLS 655
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 196/471 (41%), Gaps = 93/471 (19%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + S K AL + N R T ++ C+S+ + LG++ H +
Sbjct: 197 NSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAV 256
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S+ ++ + N +++MY K G +++A F MP ++VVSW AM+AG SQ + DA++
Sbjct: 257 TSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVR 316
Query: 123 LY-----------------------------------IQMLQSGVMPGQFTFGSIIKACS 147
L+ QML SG+ P + T S++ C+
Sbjct: 317 LFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 148 GLGSVCLGRQLHAHVI-------KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
+G++ G+++H + I K+ HG + N LI MY K ++ AR +F ++ K
Sbjct: 377 SVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPK 436
Query: 201 --DVTSWGSMIAAFSKLGYELEALCHFNEMLHHG-AYQPNEFIFGSVFSACSNF------ 251
DV +W MI +S+ G +AL +EM +PN F AC++
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIG 496
Query: 252 -----------------------------------ARILFNEIDSPDLASWNALIAGVAS 276
AR++F+ + + +W +L+ G
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGM 556
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV-- 334
H EA+ +F EMR DG+T+ +L AC + QGM+ Y +M D V
Sbjct: 557 HGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME---YFNRMKTDFGVSP 613
Query: 335 -PVCNAILT-MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
P A L + + L AL + +E+ V W ++++ C H + E
Sbjct: 614 GPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVE 664
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 148/289 (51%), Gaps = 8/289 (2%)
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WN+LI ++ AN+ +S F M PD T + AC ++ G H+
Sbjct: 95 WNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSR 154
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
GF SNV V NA++ MY++C L +A VF E+ D VSWNSII + + + +
Sbjct: 155 VTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEM-PVWDVVSWNSIIESYAKLGKPKMAL 213
Query: 387 RLFSRMLAS-QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
+FS+M +PD IT +V+ CA + + + Q H + + + ++FV N L+D+
Sbjct: 214 EMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDM 273
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y K G + A +F+ M DVVSW++++ GY+Q G ++A++LF +M+ + ++VT
Sbjct: 274 YAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTW 333
Query: 506 VGVLTACSHVGLVEEGLHLYR------IMENEYGIIPTREHCSCVVDLL 548
++ + GL E L + R I NE +I C+ V L+
Sbjct: 334 SAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALM 382
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 136/269 (50%), Gaps = 9/269 (3%)
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGK-NADSVSWNSI 372
T+ Q +H ++ G + + + + +++ Y L +A+ + + +A WNS+
Sbjct: 40 TISQVKLIHQKLLSFGILT-LNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSL 98
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
I + + +A + F M + PD+ TF V AC +++S+ H TG
Sbjct: 99 IRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGF 158
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
+VFV N L+ +Y +CGSL ARK+F+ M DVVSW+S+I YA+ G AL++F++
Sbjct: 159 MSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSK 218
Query: 493 M-RSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLA 549
M G P+ +TLV VL C+ VG G H + + +I +C+VD+ A
Sbjct: 219 MTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSE---MIQNMFVGNCLVDMYA 275
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ G + EA + M D+V W +++A
Sbjct: 276 KFGMMDEANTVFSNMPVK-DVVSWNAMVA 303
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 181/563 (32%), Positives = 303/563 (53%), Gaps = 44/563 (7%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP T+ ++ AC + S + G VH + S + +V + N +++MYG+CG+ E+AR
Sbjct: 123 RPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQ 182
Query: 92 GFDKMPQRNV---VSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACS 147
FD+M +R V VSW +++A Q A+K++ +M + G+ P + +++ AC+
Sbjct: 183 VFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACA 242
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
+G+ G+Q+H + ++S + NA++ MY K + +A VF + KDV SW +
Sbjct: 243 SVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNA 302
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASW 267
M+ +S++G +AL F ++ +I N + +W
Sbjct: 303 MVTGYSQIGRFDDALGLFEKIREE---------------------KIELN------VVTW 335
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
+A+IAG A EA+ +F +MR P+ +T+ SLL C TL G + H + IK
Sbjct: 336 SAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIK 395
Query: 328 --MGFDSNVP-----VCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQH 379
+ D N P V NA++ MY+KC A +F + K+ V+W +I QH
Sbjct: 396 WILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQH 455
Query: 380 NQAEELFRLFSRMLASQ--IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL-AFDV 436
+A E LFS+ML + P+ T + + ACA++ +L Q+H Y+ + + +
Sbjct: 456 GEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAML 515
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
FV N L+D+Y K G + +AR +F+ M + VSW+SL+ GY G G+EAL++F M+ +
Sbjct: 516 FVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKV 575
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
G+ P+ VT V VL ACSH G+V++G++ + M ++G++P EH +C+VDLL+RAG + E
Sbjct: 576 GLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDE 635
Query: 557 AEDFINQMACDADIVVWKSLLAS 579
A + I M VW +LL++
Sbjct: 636 AMELIRGMPMKPTPAVWVALLSA 658
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 188/449 (41%), Gaps = 89/449 (19%)
Query: 24 FSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYG 81
F + ++ IRP + ++ AC+S+ + G++VH + L S DV + N +++MY
Sbjct: 218 FERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYA 277
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL------------------ 123
KCG +E+A F++M ++VVSW AM+ G SQ + +DA+ L
Sbjct: 278 KCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSA 337
Query: 124 -----------------YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK-- 164
+ QM G P T S++ C+ G++ G++ H H IK
Sbjct: 338 VIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWI 397
Query: 165 -----SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD--VTSWGSMIAAFSKLGY 217
++ G L+ NALI MY+K AR +F I KD V +W +I ++ G
Sbjct: 398 LNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGE 457
Query: 218 ELEALCHFNEMLHHGAY-QPNEFIFGSVFSACSNF------------------------- 251
EAL F++ML + PN F AC+
Sbjct: 458 ANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFV 517
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR++F+ + + SW +L+ G H EA+ +F EM+ L
Sbjct: 518 ANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGL 577
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNAL 354
+PDG+T +L AC + QG+ + + K G ++ + ++ L A+
Sbjct: 578 VPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAM 637
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ + + W ++++AC + E
Sbjct: 638 ELIRGMPMKPTPAVWVALLSACRVYANVE 666
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 131/245 (53%), Gaps = 11/245 (4%)
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSV-SWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
I++MY + AL V + L ++ +V WN +I + E++ +L+ RM +
Sbjct: 64 IISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWR 123
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
PDH TF V+ AC ++ S +H + +G ++VFV NGL+ +Y +CG+ +AR++
Sbjct: 124 PDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQV 183
Query: 459 FNFMENP---DVVSWSSLILGYAQFGCGDEALKLFTRM-RSLGVSPNLVTLVGVLTACSH 514
F+ M D+VSW+S++ Y Q G A+K+F RM LG+ P+ V+LV VL AC+
Sbjct: 184 FDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACAS 243
Query: 515 VGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
VG G +H Y + G+ + VVD+ A+ G + EA +M D+V
Sbjct: 244 VGAWSRGKQVHGYALRS---GLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVK-DVVS 299
Query: 573 WKSLL 577
W +++
Sbjct: 300 WNAMV 304
>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 181/596 (30%), Positives = 303/596 (50%), Gaps = 46/596 (7%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
Q + + L Y S T++ T+ L+ ACSSL LG +H IL+S D
Sbjct: 47 QGAHRQVLATYA-SMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRILVSGLSLDAY 105
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ + ++N Y K G + AR FD MP+RNVV WT++I S+ + +A L+ +M + G
Sbjct: 106 IASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQG 165
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
+ P T S++ S L V + LH I S + N++++MY K I +R
Sbjct: 166 IQPSSVTMLSLLFGVSELAHV---QCLHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSR 222
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF 251
+F + ++D+ SW S+++A++++GY E L M G ++P+ FGSV S ++
Sbjct: 223 KLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQG-FEPDPQTFGSVLSVAASR 281
Query: 252 ARI----------------------------------------LFNEIDSPDLASWNALI 271
+ +F D+ W A+I
Sbjct: 282 GELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMI 341
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
+G+ + +A++A+++F +M + T+ S++ AC + G VH Y+ +
Sbjct: 342 SGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSVHGYMFRHELP 401
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
++ N+++TM+AKC L + +VF ++ K + VSWN++I Q+ + LF+
Sbjct: 402 MDIATQNSLVTMHAKCGHLDQSSIVFDKMNKR-NLVSWNAMITGYAQNGYVCKALFLFNE 460
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M + PD IT ++ CA L + +H ++ + GL + V L+D+Y KCG
Sbjct: 461 MRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGD 520
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
L A++ FN M + D+VSWS++I+GY G G+ AL+ +++ G+ PN V + VL++
Sbjct: 521 LDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALRFYSKFLESGMKPNHVIFLSVLSS 580
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
CSH GLVE+GL++Y M ++GI P EH +CVVDLL+RAG V EA + + D
Sbjct: 581 CSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLLSRAGRVEEAYNLYKKKFSD 636
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 149/514 (28%), Positives = 242/514 (47%), Gaps = 45/514 (8%)
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
S+ A+I S + Y ML++ V +TF S++KACS L LG LH +
Sbjct: 36 SFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRI 95
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL 222
+ S ++LI Y KF AR VF + ++V W S+I +S+ G EA
Sbjct: 96 LVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAF 155
Query: 223 CHFNEMLHHGAYQPN-----EFIFG------------------------------SVFSA 247
F+EM G QP+ +FG S++
Sbjct: 156 SLFDEMRRQGI-QPSSVTMLSLLFGVSELAHVQCLHGSAILYGFMSDINLSNSMLSMYGK 214
Query: 248 CSN--FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
C N ++R LF+ +D DL SWN+L++ A E + L MR + PD T S+
Sbjct: 215 CRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSV 274
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
L R L G +H I++ FD + V +++ MY K + A +F E + D
Sbjct: 275 LSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMF-ERSLDKD 333
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
V W ++I+ +Q+ A++ +F +ML +K T V+ ACA++ S + T +H
Sbjct: 334 VVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSVHG 393
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
Y+ + L D+ N L+ ++ KCG L + +F+ M ++VSW+++I GYAQ G +
Sbjct: 394 YMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCK 453
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSC 543
AL LF MRS +P+ +T+V +L C+ G + G +H + I G+ P +
Sbjct: 454 ALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRN---GLRPCILVDTS 510
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+VD+ + G + A+ NQM D+V W +++
Sbjct: 511 LVDMYCKCGDLDIAQRCFNQMPSH-DLVSWSAII 543
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 152/319 (47%), Gaps = 8/319 (2%)
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
S + S+NA+I +S + ++ ++ M + D T SLL AC G+
Sbjct: 31 SATINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLS 90
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H I+ G + + ++++ YAK A VF + + V W SII +
Sbjct: 91 LHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVF-DFMPERNVVPWTSIIGCYSRTG 149
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
+ E F LF M I+P +T ++ +++A ++ LH G D+ + N
Sbjct: 150 RVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQC---LHGSAILYGFMSDINLSN 206
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
++ +Y KC ++ +RKLF++M+ D+VSW+SL+ YAQ G E L L MR G P
Sbjct: 207 SMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEP 266
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
+ T VL+ + G ++ G L+ +I+ + + E + ++ + + G + A
Sbjct: 267 DPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVE--TSLIVMYLKGGNIDIAFR 324
Query: 560 FINQMACDADIVVWKSLLA 578
+ + D D+V+W ++++
Sbjct: 325 MFER-SLDKDVVLWTAMIS 342
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 106/212 (50%), Gaps = 5/212 (2%)
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
S+N+II ++ ++ ML + + D TF ++ AC+ + + LH I
Sbjct: 36 SFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRI 95
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
+GL+ D ++ + L++ Y K G ARK+F+FM +VV W+S+I Y++ G EA
Sbjct: 96 LVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAF 155
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
LF MR G+ P+ VT++ +L S + V + LH I+ YG + + ++ +
Sbjct: 156 SLFDEMRRQGIQPSSVTMLSLLFGVSELAHV-QCLHGSAIL---YGFMSDINLSNSMLSM 211
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + + + M D+V W SL+++
Sbjct: 212 YGKCRNIEYSRKLFDYMD-QRDLVSWNSLVSA 242
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 183/548 (33%), Positives = 282/548 (51%), Gaps = 40/548 (7%)
Query: 35 PSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
P T+ ++ A + +RS R+V D I QP++ N++L Y K G L +
Sbjct: 36 PETFLHNNIVHAYALIRSSIYARRVFDGI----PQPNLFSWNNLLLAYSKSGHLSEMERT 91
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGLGS 151
F+K+P R+ V+W +I G S + A+K Y M++ + T +++K S G
Sbjct: 92 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGH 151
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
V LG+Q+H VIK S+L+ + L+ MY+K I DA+ VF G+ ++ + +++
Sbjct: 152 VSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGG 211
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALI 271
G +AL F M D SW+A+I
Sbjct: 212 LLACGMIEDALQLFRGM--------------------------------EKDSVSWSAMI 239
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
G+A + EA+ F EM+ L D S+L AC G + G Q+H+ II+
Sbjct: 240 KGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQ 299
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
++ V +A++ MY KC L A VF + K + VSW +++ Q +A E ++F
Sbjct: 300 DHIYVGSALIDMYCKCKCLHYAKTVFDRM-KQKNVVSWTAMVVGYGQTGRAGEAVKIFLD 358
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M S I PDH T + ACA ++SLE +Q H GL + V N L+ +Y KCG
Sbjct: 359 MQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGD 418
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+ + +LFN M D VSW++++ YAQFG EA++LF +M LG+ P+ VTL GV++A
Sbjct: 419 IDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISA 478
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
CS GLVE+G + +M NEYGI+P+ H SC++DL +R+G + EA FIN M D +
Sbjct: 479 CSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAI 538
Query: 572 VWKSLLAS 579
W +LL++
Sbjct: 539 GWTTLLSA 546
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 194/432 (44%), Gaps = 77/432 (17%)
Query: 23 DFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGK 82
DFS N T + T ++ SS + LG+++H ++ + +++ + +L+MY K
Sbjct: 129 DFSSNLTRV-----TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSK 183
Query: 83 CGSLEDARMGFDKMPQRNV------------------------------VSWTAMIAGCS 112
G + DA+ F + RN VSW+AMI G +
Sbjct: 184 VGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLA 243
Query: 113 QNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
QN E +AI+ + +M G+ Q+ FGS++ AC GLG++ GRQ+HA +I++ H+
Sbjct: 244 QNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIY 303
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
+ALI MY K + A+ VF + +K+V SW +M+ + + G EA+ F +M G
Sbjct: 304 VGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSG 363
Query: 233 AYQPNEFIFGSVFSACSNFARI-------------------------------------- 254
P+ + G SAC+N + +
Sbjct: 364 I-DPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDS 422
Query: 255 --LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
LFNE++ D SW A+++ A A EA+ LF +M L PDG+T+ ++ AC
Sbjct: 423 TRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRA 482
Query: 313 LTLYQGMQVHSYII-KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+ +G + +I + G + + ++ ++++ + A+ + D++ W +
Sbjct: 483 GLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTT 542
Query: 372 IIAACLQHNQAE 383
+++AC E
Sbjct: 543 LLSACRNKGNLE 554
>gi|302766239|ref|XP_002966540.1| hypothetical protein SELMODRAFT_61257 [Selaginella moellendorffii]
gi|300165960|gb|EFJ32567.1| hypothetical protein SELMODRAFT_61257 [Selaginella moellendorffii]
Length = 630
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 190/592 (32%), Positives = 294/592 (49%), Gaps = 58/592 (9%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLS-KCQPDVVLQNHILNMYGKCG---SLEDARMGF 93
YA L+ C RSL GR+VHDHIL + V L N ++ MY KCG SL DAR F
Sbjct: 1 YASLLRRCGISRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVF 60
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
D+MP+++VVSW+ +IA Q +AI L+ +M V P + S + ACSG +
Sbjct: 61 DQMPKKDVVSWSCIIAAYGQAGHCREAINLFQRM---DVEPNEMVIVSTLAACSGAKDLA 117
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
LG +HA ++ + + AL+ MY K I AR VF I KDV SW +MI AF+
Sbjct: 118 LGMAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQIPHKDVVSWTAMITAFA 177
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------- 251
++G +AL M+ QPN F + +ACS+
Sbjct: 178 QMGDCRQALETLEGMIQ-ARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDI 236
Query: 252 ------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
A +F ++ + SWN++IA A+ + + AM LF M
Sbjct: 237 TIQNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCAAMGLFHGMNLE 296
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS--NVPVCNAILTMYAKCSVLC 351
+ PD ++ +L AC L ++HS + S ++ V N+++T YAKC L
Sbjct: 297 GIKPDDVSFLGVLSACSSTRCLRSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLE 356
Query: 352 NALLVFKEL-GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
A +F+ + GKN VSW +++ A H + L+ +M+ I+PD + +V+ A
Sbjct: 357 AAERIFQRIPGKNV--VSWTAMLTAYTFHGNGSKALELYDKMVGQSIQPDSVVLLNVIYA 414
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP----- 465
+ + + + +LH + + + + N L+++Y +CGSL AR++F+ +E
Sbjct: 415 GSLVGDVGLARKLHARVASSSFMLKIQIQNALINMYTRCGSLEEARRVFDGIERKNLVAR 474
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
D V+WSSL+ GYA G + A+ L+ M GV P+ VT V +L +CSH GL+ + H +
Sbjct: 475 DTVTWSSLVAGYAHHGHAEYAILLYRDMHLEGVQPDSVTYVSILNSCSHAGLLAQARHFF 534
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
M ++ + +H C+VD+L RAG V AED + M D+V W +LL
Sbjct: 535 VSMVEDHCLAAWPDHWKCMVDVLGRAGFVGRAEDVVRNMPFQPDVVAWNTLL 586
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 129/227 (56%), Gaps = 10/227 (4%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQ--PDVVLQNHILNMYGKCGSLED 88
I+P ++ G++SACSS R L+ +++H + L+ PD+ ++N ++ Y KCG LE
Sbjct: 298 IKPDDVSFLGVLSACSSTRCLRSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLEA 357
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A F ++P +NVVSWTAM+ + + + A++LY +M+ + P ++I A S
Sbjct: 358 AERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQSIQPDSVVLLNVIYAGSL 417
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK-----DVT 203
+G V L R+LHA V S + QNALI MYT+ + +AR VF GI RK D
Sbjct: 418 VGDVGLARKLHARVASSSFMLKIQIQNALINMYTRCGSLEEARRVFDGIERKNLVARDTV 477
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
+W S++A ++ G+ A+ + +M H QP+ + S+ ++CS+
Sbjct: 478 TWSSLVAGYAHHGHAEYAILLYRDM-HLEGVQPDSVTYVSILNSCSH 523
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 183/412 (44%), Gaps = 63/412 (15%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
++ P T+ I+ACSS L GRK+H ++ D+ +QN +++MY K S E
Sbjct: 194 QARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDITIQNALVSMYAKGSSAE 253
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
+A F +M RN VSW +MIA + + Q A+ L+ M G+ P +F ++ ACS
Sbjct: 254 EALSVFQRMEDRNRVSWNSMIAAFAASAQSCAAMGLFHGMNLEGIKPDDVSFLGVLSACS 313
Query: 148 GLGSVCLGRQLHAHV-IKSEHG-SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
+ +++H+ + + + H L +N+L+ Y K + A +F I K+V SW
Sbjct: 314 STRCLRSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLEAAERIFQRIPGKNVVSW 373
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV--------------------- 244
+M+ A++ G +AL +++M+ + QP+ + +V
Sbjct: 374 TAMLTAYTFHGNGSKALELYDKMVGQ-SIQPDSVVLLNVIYAGSLVGDVGLARKLHARVA 432
Query: 245 -----------------FSACSNF--ARILFNEID-----SPDLASWNALIAGVASHSNA 280
++ C + AR +F+ I+ + D +W++L+AG A H +A
Sbjct: 433 SSSFMLKIQIQNALINMYTRCGSLEEARRVFDGIERKNLVARDTVTWSSLVAGYAHHGHA 492
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
A+ L+ +M + PD +T S+L +C L Q + + M D C A
Sbjct: 493 EYAILLYRDMHLEGVQPDSVTYVSILNSCSHAGLLAQARH---FFVSMVEDH----CLAA 545
Query: 341 LTMYAKCSV--------LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
+ KC V + A V + + D V+WN+++ C H A
Sbjct: 546 WPDHWKCMVDVLGRAGFVGRAEDVVRNMPFQPDVVAWNTLLGCCKVHGDARR 597
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 182/596 (30%), Positives = 304/596 (51%), Gaps = 45/596 (7%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
T + ST ++ S R+L GR VH I+ + + N ++N Y KCG L
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQN---YQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
A F+ + ++VVSW ++I G SQN ++L+ +M ++P +T I K
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
A S L S +GRQ HA V+K + +L+ MY K + D VF+ + ++ +
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYT 186
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN-EFIFGSV------------------- 244
W +M++ ++ G EA+ FN L + +++F +V
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCI 246
Query: 245 --------FSACSNFARILFNEIDSPDLA-------------SWNALIAGVASHSNANEA 283
F A SN ++++ +S + A +W+A++ G + + + EA
Sbjct: 247 TIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEA 306
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
+ LFS M + P T+ +L AC L +G Q+HS+++K+GF+ ++ A++ M
Sbjct: 307 VKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDM 366
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
YAK L +A F L + D W S+I+ +Q++ EE L+ RM + I P+ T
Sbjct: 367 YAKAGCLADARKGFDCL-QERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPT 425
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
V+ AC+ +A+LE+ Q+H + K G +V + + L +Y KCGSL +F
Sbjct: 426 MASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP 485
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
N DVVSW+++I G + G GDEAL+LF M + G+ P+ VT V +++ACSH G VE G
Sbjct: 486 NKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWF 545
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ +M ++ G+ P +H +C+VDLL+RAG + EA++FI D + +W+ LL++
Sbjct: 546 YFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSA 601
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + + EAL+ Y + I P T A ++ ACSSL +L+LG++VH H +
Sbjct: 395 ISGYVQNSDNEEALILYRRMKTAGIIPNDP-TMASVLKACSSLATLELGKQVHGHTIKHG 453
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+V + + + MY KCGSLED + F + P ++VVSW AMI+G S N Q ++A++L+
Sbjct: 454 FGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFE 513
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ML G+ P TF +II ACS G V G
Sbjct: 514 EMLAEGMEPDDVTFVNIISACSHKGFVERG 543
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 181/594 (30%), Positives = 285/594 (47%), Gaps = 79/594 (13%)
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIA---------- 109
H + + N +LN K G + DAR FDKMPQ++ SW MI+
Sbjct: 55 HTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVE 114
Query: 110 ------GCSQNYQ---------------ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
GCS + +A L+ M G QFT GS+++ CS
Sbjct: 115 ARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSS 174
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA--RKDVTSWG 206
LG + G +H V+K+ ++ L+ MY K + +A +F G+ RK+ W
Sbjct: 175 LGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWT 234
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------- 251
+M+ +++ G +A+ F M H + N++ F ++ +ACS+
Sbjct: 235 AMVTGYAQNGDGYKAVEFFRYM-HAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVK 293
Query: 252 -------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
A+ + ++ D+ SWN+L+ G H EA+ L
Sbjct: 294 SGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRL 353
Query: 287 FSEMRDRELLPDGLTVHSLL-CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
F M R + D T S+L C +G + VH IIK GF++ V NA++ MYA
Sbjct: 354 FKNMHGRNMKIDDYTFPSVLNCCVVGSIN---PKSVHGLIIKTGFENYKLVSNALVDMYA 410
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
K + A VF+++ + D +SW S++ Q+N EE ++F M + + PD
Sbjct: 411 KTGDMDCAYTVFEKMLEK-DVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVA 469
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
++ ACA++ LE Q+H K+GL + V N L+ +Y KCG L A +F M+
Sbjct: 470 SILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVK 529
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
DV++W+++I+GYAQ G G +LK + M S G P+ +T +G+L ACSH GLV+EG +
Sbjct: 530 DVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYF 589
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ M YGI P EH +C++DL R+G + EA+ ++QM D VWKSLL++
Sbjct: 590 QQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSA 643
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 234/480 (48%), Gaps = 44/480 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD-- 94
T ++ CSSL +Q G +H ++ + + +V + +++MY KC + +A F
Sbjct: 164 TLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGL 223
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+ ++N V WTAM+ G +QN A++ + M GV Q+TF +I+ ACS + + C
Sbjct: 224 EFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCF 283
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G Q+H ++KS GS++ Q+AL+ MY K + +A+N+ + DV SW S++ F +
Sbjct: 284 GEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVR 343
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-------------------SNF---- 251
G E EAL F M H + +++ F SV + C N+
Sbjct: 344 HGLEEEALRLFKNM-HGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVS 402
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A +F ++ D+ SW +L+ G A +++ E++ +F +MR +
Sbjct: 403 NALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVN 462
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD V S+L AC L G QVH IK G + V N+++ MYAKC L +A +
Sbjct: 463 PDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAI 522
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + + D ++W +II Q+ + + + M++S +PD ITF ++ AC+
Sbjct: 523 FVSM-QVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGL 581
Query: 417 LEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++ + + K G+ ++D++ + G L A++L + M+ PD W SL+
Sbjct: 582 VDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLL 641
>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
Length = 717
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 193/584 (33%), Positives = 297/584 (50%), Gaps = 47/584 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDK 95
TY+ +++AC+SL L+ G+ V ++ KC DV + I+++Y KCG + +AR F +
Sbjct: 75 TYSSVLAACASLEELRFGKVVQARVI--KCGAEDVFVCTSIVDLYAKCGHMAEAREVFSR 132
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ +VVSWT M++G +++ A++++ +M SGV T S+I AC VC
Sbjct: 133 ISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMVCEA 192
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG---IARKDVTSWGSMIAAF 212
Q+HA V KS ALI+M +K I + VF I R+++ + M+ +F
Sbjct: 193 SQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVN--VMVTSF 250
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA--CSNFAR----------------- 253
S+ +A+ F ML G P+EF S+ S C N +
Sbjct: 251 SQNKKPGKAIRLFTRMLQEG-LNPDEFSVCSLLSVLDCLNLGKQVHSYTLKSGLILDLTV 309
Query: 254 ------------------ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
LF EI D A W ++I+G + EA+ LFSEM D
Sbjct: 310 GSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGT 369
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD T+ ++L C +L + ++H Y ++ G D +P+ +A++ Y+KC L A
Sbjct: 370 SPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARK 429
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
V+ L D VS +S+I+ QH ++ F LF M+ S D + ++ A
Sbjct: 430 VYDRL-PEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLSE 488
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
E+ Q+H YITK GL + V + L+ +Y K GS+ K F+ + PD+++W++LI
Sbjct: 489 ESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLIAWTALIA 548
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
YAQ G +EAL+++ M+ G P+ VT VGVL+ACSH GLVEEG M +YGI
Sbjct: 549 SYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKDYGIE 608
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P H C+VD L R+G + EAE+FIN D +VW +LLA+
Sbjct: 609 PENRHYVCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLAA 652
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 146/550 (26%), Positives = 247/550 (44%), Gaps = 49/550 (8%)
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
V+Q+ +++ + K EDA F NV W +IAG +N L+ +M
Sbjct: 8 VVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNG 67
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
P +T+ S++ AC+ L + G+ + A VIK + +++ +Y K + +A
Sbjct: 68 FQKPDSYTYSSVLAACASLEELRFGKVVQARVIKC-GAEDVFVCTSIVDLYAKCGHMAEA 126
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS- 249
R VFS I+ V SW M++ ++K AL F EM H G + N SV SAC
Sbjct: 127 REVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGV-EINSCTVTSVISACGR 185
Query: 250 ---------------------------------------NFARILFNEIDSPDLASW-NA 269
N + +F ++D + N
Sbjct: 186 PSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVNV 245
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
++ + + +A+ LF+ M L PD +V SLL + + L L G QVHSY +K G
Sbjct: 246 MVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLL-SVLDCLNL--GKQVHSYTLKSG 302
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
++ V +++ TMY+KC L + +F+E+ D+ W S+I+ ++ E LF
Sbjct: 303 LILDLTVGSSLFTMYSKCGSLEESYSLFQEI-PFKDNACWASMISGFNEYGYLREAIGLF 361
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
S ML PD T V+ C+ + SL ++H Y + G+ + + + L++ Y KC
Sbjct: 362 SEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKC 421
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
GSL ARK+++ + D VS SSLI GY+Q G + LF M G S + + +L
Sbjct: 422 GSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSIL 481
Query: 510 TACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
A E G ++ + + G+ S ++ + ++ G + + +Q+ D
Sbjct: 482 KAAVLSEESELGAQVHAYI-TKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQIN-GPD 539
Query: 570 IVVWKSLLAS 579
++ W +L+AS
Sbjct: 540 LIAWTALIAS 549
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 140/562 (24%), Positives = 249/562 (44%), Gaps = 60/562 (10%)
Query: 16 NEALVAYDF--SQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQ 73
N+A A + ++ + I T +ISAC + +VH + S D +
Sbjct: 152 NDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDTSVA 211
Query: 74 NHILNMYGKCGSLEDARMGF---DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+++M K G + + F D + ++N+V+ M+ SQN + AI+L+ +MLQ
Sbjct: 212 AALISMNSKSGDINLSERVFEDLDDIRRQNIVN--VMVTSFSQNKKPGKAIRLFTRMLQE 269
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G+ P +F+ S++ S L + LG+Q+H++ +KS L ++L MY+K + ++
Sbjct: 270 GLNPDEFSVCSLL---SVLDCLNLGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEES 326
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
++F I KD W SMI+ F++ GY EA+ F+EML G P+E +V + CS+
Sbjct: 327 YSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGT-SPDESTLAAVLTVCSS 385
Query: 251 ----------------------------------------FARILFNEIDSPDLASWNAL 270
AR +++ + D S ++L
Sbjct: 386 LPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSL 445
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I+G + H + LF +M D + S+L A + G QVH+YI K+G
Sbjct: 446 ISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLSEESELGAQVHAYITKIGL 505
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+ V +++LTMY+K + + F ++ D ++W ++IA+ QH +A E +++
Sbjct: 506 CTEPSVGSSLLTMYSKFGSIEDCCKAFSQI-NGPDLIAWTALIASYAQHGKANEALQVYC 564
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEM-VTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
M KPD +TF V+ AC+ +E L+ + G+ + ++D +
Sbjct: 565 LMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKDYGIEPENRHYVCMVDALGRS 624
Query: 450 GSLGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN----LVT 504
G L A N PD + W +L+ + GD L +++ + P+ V+
Sbjct: 625 GRLREAENFINTRPIKPDALVWGTLLAACKIY--GDVELGKLAAKKAIELEPSDAGAYVS 682
Query: 505 LVGVLTACSHVGLVEEGLHLYR 526
L +L VEE L +
Sbjct: 683 LSNILAEVGEWDEVEETRKLMK 704
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 106/198 (53%), Gaps = 2/198 (1%)
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
MG+ V ++++ ++K +A VF++ +A+ WN+IIA L++ +F
Sbjct: 1 MGYFFYEVVQSSLIDAFSKNLRFEDAYKVFRDT-LSANVYCWNTIIAGALRNQNYGAVFD 59
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
LF M KPD T++ V+ ACA + L + + K G A DVFV ++D+Y
Sbjct: 60 LFHEMCNGFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCG-AEDVFVCTSIVDLYA 118
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
KCG + AR++F+ + NP VVSW+ ++ GY + AL++F MR GV N T+
Sbjct: 119 KCGHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTS 178
Query: 508 VLTACSHVGLVEEGLHLY 525
V++AC +V E ++
Sbjct: 179 VISACGRPSMVCEASQVH 196
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 182/608 (29%), Positives = 314/608 (51%), Gaps = 65/608 (10%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPD-VVLQNHILNMYGKCGSLEDA 89
I+P YA L+ A + L+ ++LG+++H H+ D V + N ++N+Y KCG
Sbjct: 6 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
FD++ +RN VSW ++I+ + A++ + ML V P FT S++ ACS L
Sbjct: 66 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 125
Query: 150 G---SVCLGRQLHAHVI-KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
+ +G+Q+HA+ + K E S +I N L+AMY K ++ ++ + +D+ +W
Sbjct: 126 PMPEGLMMGKQVHAYGLRKGELNSFII--NTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 183
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------- 251
+++++ + LEAL + EM+ G +P+EF SV ACS+
Sbjct: 184 NTVLSSLCQNEQLLEALEYLREMVLEGV-EPDEFTISSVLPACSHLEMLRTGKELHAYAL 242
Query: 252 ---------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
R +F+ + + WNA+IAG + + + EA+
Sbjct: 243 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 302
Query: 285 SLFSEMRDRE-LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
LF M + LL + T+ ++ AC+ + +H +++K G D + V N ++ M
Sbjct: 303 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDM 362
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML---------A 394
Y++ + A+ +F ++ ++ D V+WN++I + E+ L +M A
Sbjct: 363 YSRLGKIDIAMRIFGKM-EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGA 421
Query: 395 SQI--KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
S++ KP+ IT ++ +CA +++L ++H Y K LA DV V + L+D+Y KCG L
Sbjct: 422 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 481
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
+RK+F+ + +V++W+ +I+ Y G G EA+ L M GV PN VT + V AC
Sbjct: 482 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 541
Query: 513 SHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV- 571
SH G+V+EGL ++ +M+ +YG+ P+ +H +CVVDLL RAG + EA +N M D +
Sbjct: 542 SHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG 601
Query: 572 VWKSLLAS 579
W SLL +
Sbjct: 602 AWSSLLGA 609
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 251/531 (47%), Gaps = 63/531 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSL---RSLQLGRKVHD 59
N +SSLC + AL A+ + N+ T +++ACS+L L +G++VH
Sbjct: 81 NSLISSLCSFEKWEMALEAFR-CMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA 139
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
+ L K + + + N ++ MYGK G L +++ R++V+W +++ QN Q +
Sbjct: 140 YGL-RKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLE 198
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH-GSHLIAQNALI 178
A++ +M+ GV P +FT S++ ACS L + G++LHA+ +K+ + +AL+
Sbjct: 199 ALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALV 258
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM---------- 228
MY ++L R VF G+ + + W +MIA +S+ ++ EAL F M
Sbjct: 259 DMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANS 318
Query: 229 ----------LHHGAYQPNEFIFG---------------SVFSACSNFARI-----LFNE 258
+ GA+ E I G ++ S +I +F +
Sbjct: 319 TTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGK 378
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE-----------LLPDGLTVHSLLC 307
++ DL +WN +I G + +A+ L +M++ E L P+ +T+ ++L
Sbjct: 379 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 438
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
+C L +G ++H+Y IK ++V V +A++ MYAKC L + VF ++ + + +
Sbjct: 439 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVI 497
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
+WN II A H +E L M+ +KP+ +TF V AC+ ++ ++ Y+
Sbjct: 498 TWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YV 556
Query: 428 TKT--GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP--DVVSWSSLI 474
K G+ ++D+ + G + A +L N M +WSSL+
Sbjct: 557 MKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 607
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/513 (26%), Positives = 234/513 (45%), Gaps = 72/513 (14%)
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG-SHLIAQNALIAMYTKFD 185
M+ G+ P + F +++KA + L + LG+Q+HAHV K +G + N L+ +Y K
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 186 RILDARNVFSGIARKDVTSWGSMIA---AFSKLGYELEAL-CHFNEMLHHGAYQPNEFIF 241
VF I+ ++ SW S+I+ +F K LEA C +E + +P+ F
Sbjct: 61 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENV-----EPSSFTL 115
Query: 242 GSVFSACSNF------------------------------------------ARILFNEI 259
SV +ACSN +++L
Sbjct: 116 VSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSF 175
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
DL +WN +++ + + EA+ EM + PD T+ S+L AC L G
Sbjct: 176 GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 235
Query: 320 QVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
++H+Y +K G D N V +A++ MY C + + VF + + WN++IA Q
Sbjct: 236 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGL-WNAMIAGYSQ 294
Query: 379 HNQAEELFRLFSRMLASQ-IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
+ +E LF M S + + T V+ AC + + +H ++ K GL D F
Sbjct: 295 NEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF 354
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL- 496
V N LMD+Y + G + A ++F ME+ D+V+W+++I GY ++AL L +M++L
Sbjct: 355 VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLE 414
Query: 497 ----------GVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCV 544
+ PN +TL+ +L +C+ + + +G +H Y I N + S +
Sbjct: 415 RKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV---GSAL 471
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
VD+ A+ GC+ + +Q+ +++ W ++
Sbjct: 472 VDMYAKCGCLQMSRKVFDQIP-QKNVITWNVII 503
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 106/193 (54%), Gaps = 7/193 (3%)
Query: 25 SQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGK 82
S+ + + ++P+ T ++ +C++L +L G+++H + + + DV + + +++MY K
Sbjct: 418 SKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAK 477
Query: 83 CGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI 142
CG L+ +R FD++PQ+NV++W +I + +AI L M+ GV P + TF S+
Sbjct: 478 CGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISV 537
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILDARNVFSGIAR- 199
ACS G V G ++ +V+K ++G + + ++ + + RI +A + + + R
Sbjct: 538 FAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRD 596
Query: 200 -KDVTSWGSMIAA 211
+W S++ A
Sbjct: 597 FNKAGAWSSLLGA 609
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD-VFVMNGLMDIYIKCG 450
M+ IKPD+ F ++ A A + +E+ Q+H ++ K G D V V N L+++Y KCG
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
G+ K+F+ + + VSW+SLI F + AL+ F M V P+ TLV V+T
Sbjct: 61 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120
Query: 511 ACSHVGLVE-----EGLHLYRIMENEYG--IIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
ACS++ + E + +H Y + + E II T +V + + G + ++ +
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT------LVAMYGKLGKLASSKVLLGS 174
Query: 564 MACDADIVVWKSLLAS 579
D+V W ++L+S
Sbjct: 175 FG-GRDLVTWNTVLSS 189
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 292/536 (54%), Gaps = 43/536 (8%)
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
++ AR FD++P+ +VV W MI + + +I LY+ MLQ GV P FTF ++KA
Sbjct: 57 IQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKA 116
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR--KDVT 203
CS L ++ LGR +H H L AL+ MY K + A+ +F+ I+ +D+
Sbjct: 117 CSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIV 176
Query: 204 SWGSMIAAFSKLGYELEALCHFNEM------------------------LHHG----AYQ 235
+W +MIAAFS + + +M LH G AY
Sbjct: 177 AWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYY 236
Query: 236 PNEFIFGSV---------FSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
F F +V ++ C +AR +FN ++ + W+A+I G H + ++A+
Sbjct: 237 IRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDAL 296
Query: 285 SLFSEMR-DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
+L+ +M L P T+ ++L AC L +G ++H ++IK G D + V N++++M
Sbjct: 297 ALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISM 356
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
YAKC ++ NA+ E+ D+VS+++II+ C+Q+ AE+ +F +M +S I P T
Sbjct: 357 YAKCGIMDNAVGFLDEMIAK-DTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLET 415
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
++ AC+ +A+L+ T H Y G D + N ++D+Y KCG + +R++F+ M+
Sbjct: 416 MIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQ 475
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
N D++SW+++I+GY G EAL LF +++LG+ P+ VTL+ VL+ACSH GLV EG +
Sbjct: 476 NRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKY 535
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ M + I P H C+VDLLARAG + EA FI +M ++ +W +LLA+
Sbjct: 536 WFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAA 591
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/485 (26%), Positives = 222/485 (45%), Gaps = 51/485 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L+ ACSSL++LQLGR +H H + D+ + +L+MY KCG L A+ F+ +
Sbjct: 109 TFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSI 168
Query: 97 PQ--RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
R++V+W AMIA S + I QM Q+GV P T SI+ ++
Sbjct: 169 SHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQ 228
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+ +HA+ I++ +++ Q AL+ MY K + AR +F+ + +K+ W +MI +
Sbjct: 229 GKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVL 288
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------------- 254
+AL +++ML P ++ AC+ +
Sbjct: 289 HDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTT 348
Query: 255 --------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+E+ + D S++A+I+G + A +A+ +F +M+
Sbjct: 349 VGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSG 408
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ P T+ +LL AC L G H Y + GF ++ +CNAI+ MY+KC + +
Sbjct: 409 IAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISR 468
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F + +N D +SWN++I H E LF + A +KPD +T V+ AC+
Sbjct: 469 EIFDRM-QNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHS 527
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNG----LMDIYIKCGSLGSARKLFNFME-NPDVVS 469
+VT+ + + F++ ++D+ + G+L A M P+V
Sbjct: 528 G---LVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRI 584
Query: 470 WSSLI 474
W +L+
Sbjct: 585 WGALL 589
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 162/324 (50%), Gaps = 14/324 (4%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
++AL YD + P+T A ++ AC+ L L+ G+K+H H++ S D + N
Sbjct: 293 SDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNS 352
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
+++MY KCG +++A D+M ++ VS++A+I+GC QN A+ ++ QM SG+ P
Sbjct: 353 LISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPY 412
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
T +++ ACS L ++ G H + + + NA+I MY+K +I +R +F
Sbjct: 413 LETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFD 472
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----- 250
+ +D+ SW +MI + G +EAL F E+ G +P++ +V SACS+
Sbjct: 473 RMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALG-LKPDDVTLIAVLSACSHSGLVT 531
Query: 251 -----FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
F+ + N P +A + ++ +A N +EA + M +P+ +L
Sbjct: 532 EGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRM---PFVPNVRIWGAL 588
Query: 306 LCACIGRLTLYQGMQVHSYIIKMG 329
L AC + G QV I +G
Sbjct: 589 LAACRTHKNIEMGEQVSKKIQLLG 612
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 174/391 (44%), Gaps = 45/391 (11%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
ST ++ +L G+ +H + + + +VVLQ +L+MY KC L AR F+
Sbjct: 211 STLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNT 270
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCL 154
+ ++N V W+AMI G + +DA+ LY ML G+ P T ++++AC+ L +
Sbjct: 271 VNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKR 330
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G++LH H+IKS N+LI+MY K + +A + KD S+ ++I+ +
Sbjct: 331 GKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQ 390
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA---------------------- 252
GY +AL F +M G P ++ ACS+ A
Sbjct: 391 NGYAEKALLIFRQMQSSGI-APYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTS 449
Query: 253 ------------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
R +F+ + + D+ SWN +I G H EA+SLF E++
Sbjct: 450 ICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALG 509
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI--LTMYAKCSVLCN 352
L PD +T+ ++L AC + +G S + F+ + + I + + A+ L
Sbjct: 510 LKPDDVTLIAVLSACSHSGLVTEGKYWFSS-MSQNFNIKPRMAHYICMVDLLARAGNLDE 568
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
A + + + W +++AAC H E
Sbjct: 569 AYTFIQRMPFVPNVRIWGALLAACRTHKNIE 599
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 6/210 (2%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+ S C QN Y E + ++ I T L+ ACS L +LQ G H + ++
Sbjct: 384 IISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRG 443
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
D + N I++MY KCG + +R FD+M R+++SW MI G + +A+ L+
Sbjct: 444 FTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQ 503
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
++ G+ P T +++ ACS G V G+ + + ++ + +A I M
Sbjct: 504 ELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAH--YICMVDLLA 561
Query: 186 RILDARNVFSGIAR----KDVTSWGSMIAA 211
R + ++ I R +V WG+++AA
Sbjct: 562 RAGNLDEAYTFIQRMPFVPNVRIWGALLAA 591
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 180/594 (30%), Positives = 311/594 (52%), Gaps = 48/594 (8%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
+++++ ST + + + C+ +LGR+VH + V + +++MY K ++
Sbjct: 86 HSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVN 145
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
D R FD+M +RNVVSWT+++AG S N +L+ QM GV+P ++T ++I A
Sbjct: 146 DGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALV 205
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
G V +G Q+HA V+K + N+LI++Y++ + DAR+VF + +D +W S
Sbjct: 206 NEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNS 265
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILF----------- 256
MIA + + G +LE FN+M G +P F SV +C++ +
Sbjct: 266 MIAGYVRNGQDLEVFEIFNKMQLAGV-KPTHMTFASVIKSCASLRELALVKLMQCKALKS 324
Query: 257 -------------------NEIDS-----------PDLASWNALIAGVASHSNANEAMSL 286
E+D ++ SW A+I+G + ++A++L
Sbjct: 325 GFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNL 384
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
FS+MR + P+ T ++L ++H+ +IK ++ + V A+L Y K
Sbjct: 385 FSQMRREGVKPNHFTYSAILTVHYPVFV----SEMHAEVIKTNYERSSSVGTALLDAYVK 440
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
+A+ VF E+ + D ++W++++A Q + EE +LF +++ IKP+ TF+
Sbjct: 441 LGNTIDAVKVF-EIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSS 499
Query: 407 VMGACA-KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
V+ ACA A+ E Q H Y K L + V + L+ +Y K G++ SA ++F +
Sbjct: 500 VINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKER 559
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
D+VSW+S+I GY+Q G +AL++F M+ + + VT +GV+TAC+H GLVE+G +
Sbjct: 560 DLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYF 619
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M N++ I PT +H SC++DL +RAG + +A IN+M VW++LL +
Sbjct: 620 NSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGA 673
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 235/482 (48%), Gaps = 41/482 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T + +I+A + + +G +VH ++ + + + N ++++Y + G L DAR FDKM
Sbjct: 196 TVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKM 255
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+ V+W +MIAG +N Q+ + +++ +M +GV P TF S+IK+C+ L + L +
Sbjct: 256 EIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVK 315
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR-KDVTSWGSMIAAFSKL 215
+ +KS + I AL+ +K + DA ++FS + K+V SW +MI+ +
Sbjct: 316 LMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQN 375
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSA--------------CSNFAR-------- 253
G +A+ F++M G +PN F + ++ + +N+ R
Sbjct: 376 GGNDQAVNLFSQMRREGV-KPNHFTYSAILTVHYPVFVSEMHAEVIKTNYERSSSVGTAL 434
Query: 254 --------------ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
+F I++ DL +W+A++AG A EA LF ++ + P+
Sbjct: 435 LDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNE 494
Query: 300 LTVHSLLCACIGRLTL-YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
T S++ AC QG Q H+Y IKM ++ + V +A++TMYAK + +A VFK
Sbjct: 495 FTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFK 554
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
K D VSWNS+I+ QH QA++ +F M + D +TF V+ AC +E
Sbjct: 555 R-QKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVE 613
Query: 419 MVTQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
+ + I + + + ++D+Y + G L A + N M P + +LG
Sbjct: 614 KGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGA 673
Query: 478 AQ 479
A+
Sbjct: 674 AR 675
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 134/278 (48%), Gaps = 4/278 (1%)
Query: 238 EFIFGSVFSACSNFARILFNEID--SPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+FI +V + A LF++I L N L+ + EA++LF + L
Sbjct: 31 KFISNTVL-CVPHIAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSL 89
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD T+ + C G L G QVH +K G +V V +++ MY K + +
Sbjct: 90 QPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRR 149
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF E+G+ + VSW S++A + ++ LF +M + P+ T + V+ A
Sbjct: 150 VFDEMGER-NVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEG 208
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+ + Q+H + K G + V N L+ +Y + G L AR +F+ ME D V+W+S+I
Sbjct: 209 VVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIA 268
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
GY + G E ++F +M+ GV P +T V+ +C+
Sbjct: 269 GYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCA 306
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 186/582 (31%), Positives = 298/582 (51%), Gaps = 47/582 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L AC++ RS+ ++H + + D + ++Y KC SL+ AR FD+ P N
Sbjct: 10 LFQACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPN 66
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
V W + + + Q + ++L+ M+ +G P FT +KAC+GL + LG+ +H
Sbjct: 67 VHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIH 126
Query: 160 AHVIKS-EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
K+ E GS + +AL+ +Y+K ++ +A VF R D W SM+ + +
Sbjct: 127 GFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDP 186
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------------ 254
EAL F++M+ + SV SAC+ +
Sbjct: 187 EEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNS 246
Query: 255 ----------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
LF+++ D+ SW+ +IA A++ ANEA++LF EM ++ P+
Sbjct: 247 LLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPN 306
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+TV S L AC L +G ++H + GF+ + V A++ MY KCS A+ +F+
Sbjct: 307 SVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQ 366
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
L K D VSW ++++ Q+ A + +F ML+ I+PD + ++ A +++ +
Sbjct: 367 RLPKK-DVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQ 425
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
LH Y+ ++G +VFV L+++Y KCGSLG A KLF M DVV WSS+I Y
Sbjct: 426 QALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYG 485
Query: 479 QFGCGDEALKLFTRM-RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
G G EAL++F +M ++ V PN VT + +L+ACSH GLVEEGL ++ M ++Y + P
Sbjct: 486 IHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPD 545
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH +VDLL R G + +A D IN+M A VW +LL +
Sbjct: 546 SEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGA 587
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/328 (35%), Positives = 179/328 (54%), Gaps = 1/328 (0%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
A I+F +I +P WN +I G A+ ++ L+S+M ++ L PD L +C G
Sbjct: 771 ASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAG 830
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
L +G +H +++ G +++ V A++ MYAKC + A LVF ++ D VSW S
Sbjct: 831 LSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVR-DLVSWTS 889
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+I+ + E F M +S + P+ ++ V+ AC + +L H Y+ +TG
Sbjct: 890 MISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTG 949
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
FD+ V +MD+Y KCGSL AR LF+ D+V WS++I Y G G +A+ LF
Sbjct: 950 FEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFD 1009
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
+M GV P+ VT VL+ACSH GL+EEG +++M E+ I + +C+VDLL RA
Sbjct: 1010 QMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRA 1069
Query: 552 GCVHEAEDFINQMACDADIVVWKSLLAS 579
G + EA D I M + D +W SLL +
Sbjct: 1070 GQLSEAVDLIENMPVEPDASIWGSLLGA 1097
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 140/518 (27%), Positives = 238/518 (45%), Gaps = 68/518 (13%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + S C++ + E L + T + AC+ LR L+LG+ +H
Sbjct: 71 NSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAK 130
Query: 63 LS-KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ + D+ + + ++ +Y KCG + +A F++ + + V WT+M+ G QN +A+
Sbjct: 131 KNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEAL 190
Query: 122 KLYIQM-LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
L+ QM + V+ T S++ AC+ L +V G +H VI+ E L N+L+ +
Sbjct: 191 ALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNL 250
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K A N+FS + KDV SW +MIA ++ EAL F+EM+ ++PN
Sbjct: 251 YAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEK-RFEPNSVT 309
Query: 241 FGSVFSACS----------------------------------------NFARILFNEID 260
S AC+ + A LF +
Sbjct: 310 VVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLP 369
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D+ SW AL++G A + A ++M +F M + PD + V +L A Q +
Sbjct: 370 KKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALC 429
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H Y+++ GF+SNV V +++ +Y+KC L +A+ +FK + D V W+S+IAA H
Sbjct: 430 LHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIAAYGIHG 488
Query: 381 QAEELFRLFSRMLA-SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA-FDVFV 438
+ E +F +M+ S ++P+++TF ++ AC+ H + + GL FD V
Sbjct: 489 RGGEALEIFDQMVKNSTVRPNNVTFLSILSACS-----------HAGLVEEGLKIFDRMV 537
Query: 439 MN----------GLM-DIYIKCGSLGSARKLFNFMENP 465
+ G+M D+ + G LG A + N M P
Sbjct: 538 HDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIP 575
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 139/619 (22%), Positives = 272/619 (43%), Gaps = 72/619 (11%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
NL++E ++ F N+ T + AC+ R+L+ G+K+H + + D +
Sbjct: 293 NLFHE-MIEKRFEPNSV-------TVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSV 344
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
+++MY KC ++A F ++P+++VVSW A+++G +QN ++ ++ ML G+
Sbjct: 345 STALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGI 404
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
P I+ A S LG LH +V++S S++ +LI +Y+K + DA
Sbjct: 405 QPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVK 464
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-- 250
+F G+ +DV W SMIAA+ G EAL F++M+ + +PN F S+ SACS+
Sbjct: 465 LFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAG 524
Query: 251 --------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
F R++ + PD + ++ + +AM + + M +P G V
Sbjct: 525 LVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMP----IPAGPHV 580
Query: 303 H-SLLCACIGRLTLYQGMQVHSYIIKMGFD--------SNVPVCNAILTMYAKCSVLCNA 353
+LL AC + G + + SN+ + A+
Sbjct: 581 WGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKE 640
Query: 354 LLVFKELGKNADSVSW--NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM--- 408
+ K G++ V +S +A+ H +++++ L ++ A K +I D +
Sbjct: 641 RGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLLHD 700
Query: 409 -GACAK-----------------------MASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
GA + ++ + + H I GL +D ++
Sbjct: 701 TGAVLQFWQRIKATESKYKTIGSAPGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAI 760
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y+ + +A +F + NP W+ +I G+A G +L+L+++M G+ P+
Sbjct: 761 MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFA 820
Query: 505 LVGVLTACSHVGLVEEGLHLYRIM-----ENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
L +C+ + ++ G +++ + N+ + + +VD+ A+ G + A
Sbjct: 821 FPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD------AALVDMYAKCGDIEAARL 874
Query: 560 FINQMACDADIVVWKSLLA 578
++MA D+V W S+++
Sbjct: 875 VFDKMAV-RDLVSWTSMIS 892
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 157/289 (54%), Gaps = 16/289 (5%)
Query: 33 IRPSTYAG--LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++P +A + +C+ L LQ G+ +H H++ C D+ + +++MY KCG +E AR
Sbjct: 814 LKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAAR 873
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ FDKM R++VSWT+MI+G + N ++ + + M SGV+P + + S++ AC LG
Sbjct: 874 LVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLG 933
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G H++VI++ ++ A++ MY+K + AR +F A KD+ W +MIA
Sbjct: 934 ALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIA 993
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNE-ID 260
++ G+ +A+ F++M+ G +P+ F V SACS+ + +++ E +
Sbjct: 994 SYGIHGHGRKAIDLFDQMVKAGV-RPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVI 1052
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+ L+++ ++ + +EA+ L M + PD SLL AC
Sbjct: 1053 ARKLSNYACMVDLLGRAGQLSEAVDLIENM---PVEPDASIWGSLLGAC 1098
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 154/294 (52%), Gaps = 19/294 (6%)
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
MR R++L D L AC ++ Q+HS + K G + + ++YAKC+
Sbjct: 1 MRSRQVLVD------LFQACNNGRSV---SQLHSQVFKTGILHDTFFATKLNSLYAKCAS 51
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK-PDHITFNDVM 408
L A VF E + + WNS + + + Q EE RLF M+ + + PD+ T +
Sbjct: 52 LQAARKVFDET-PHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIAL 110
Query: 409 GACAKMASLEMVTQLHCYITKTG-LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
ACA + LE+ +H + K + D+FV + L+++Y KCG +G A K+F + PD
Sbjct: 111 KACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDT 170
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNLVTLVGVLTACSHVGLVEEG--LHL 524
V W+S++ GY Q +EAL LF++M + V + VTLV V++AC+ + V+ G +H
Sbjct: 171 VLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHG 230
Query: 525 YRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
I G +P + +++L A+ GC A + ++M + D++ W +++A
Sbjct: 231 LVIRREFDGDLPL---VNSLLNLYAKTGCEKIAANLFSKMP-EKDVISWSTMIA 280
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 159/386 (41%), Gaps = 57/386 (14%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
+K H I Q D + MY ++ A + F+ +P W MI G + +
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
+ +++LY +M++ G+ P +F F +K+C+GL + G+ +H H++ + L
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
AL+ MY K I AR VF +A +D+ SW SMI+ ++ GY E L F+ M G
Sbjct: 857 AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI 916
Query: 235 QPNEFIFGSVFSACSN----------------------------------------FARI 254
PN SV AC N AR
Sbjct: 917 -PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 975
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC----- 309
LF+E DL W+A+IA H + +A+ LF +M + P +T +L AC
Sbjct: 976 LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 1035
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSW 369
+ +Y + ++I + ++ + + L A+ + + + D+ W
Sbjct: 1036 LEEGKMYFQLMTEEFVIARKLSNYA----CMVDLLGRAGQLSEAVDLIENMPVEPDASIW 1091
Query: 370 NSIIAACLQHNQ-------AEELFRL 388
S++ AC HN A+ LF L
Sbjct: 1092 GSLLGACRIHNNLDLAEKIADHLFHL 1117
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 109/204 (53%), Gaps = 6/204 (2%)
Query: 12 QNLYN-EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
N YN E L +D +++ I R S + L+ AC +L +L+ G H +++ + + D+
Sbjct: 896 HNGYNSETLGFFDLMRSSGVIPNRVSILSVLL-ACGNLGALRKGEWFHSYVIQTGFEFDI 954
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
++ I++MY KCGSL+ AR FD+ +++V W+AMIA + AI L+ QM+++
Sbjct: 955 LVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKA 1014
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH--GSHLIAQNALIAMYTKFDRIL 188
GV P TF ++ ACS G + G+ ++ ++ E L ++ + + ++
Sbjct: 1015 GVRPSHVTFTCVLSACSHSGLLEEGK-MYFQLMTEEFVIARKLSNYACMVDLLGRAGQLS 1073
Query: 189 DARNVFSGIA-RKDVTSWGSMIAA 211
+A ++ + D + WGS++ A
Sbjct: 1074 EAVDLIENMPVEPDASIWGSLLGA 1097
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 175/583 (30%), Positives = 299/583 (51%), Gaps = 51/583 (8%)
Query: 45 CSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSW 104
C+ + L+ GR +H IL++ + N ++N+Y KC A + FD + ++VVSW
Sbjct: 20 CTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSW 79
Query: 105 TAMIAGCSQNYQENDAIKLYIQ-------MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+I SQ Q+ A L++ M ++P T + A S L GRQ
Sbjct: 80 NCLINAFSQ--QQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQ 137
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
HA +K+ + A ++L+ MY K + +AR++F + ++ SW +MI+ ++
Sbjct: 138 AHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQEL 197
Query: 218 ELEALCHFNEMLHH-GAYQPNEFIFGSVFSACSNFARI---------------------- 254
EA F M H NEF+F SV SA + + +
Sbjct: 198 ADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVA 257
Query: 255 ------------LFNEIDSPDLA------SWNALIAGVASHSNANEAMSLFSEMRDRELL 296
L + + + +L+ +W+A++ G A ++++A+ LF +M L
Sbjct: 258 NALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGEL 317
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P T+ ++ AC + +G Q+H Y +K+G++ + V +A++ MYAKC + +A
Sbjct: 318 PSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKG 377
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F E + D V W SII +Q+ E L+ +M + P+ +T V+ AC+ +A+
Sbjct: 378 F-ECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAA 436
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L+ Q+H I K + ++ + + L +Y KCGSL ++F M DV+SW+++I G
Sbjct: 437 LDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISG 496
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
+Q G G+E L+LF +M G P+ VT V +L+ACSH+GLV+ G +++M +E+ I P
Sbjct: 497 LSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAP 556
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
T EH +C+VD+L+RAG +HEA++FI D + +W+ LLA+
Sbjct: 557 TVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAA 599
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 229/480 (47%), Gaps = 60/480 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T G+ +A S+L + GR+ H + + C DV + +LNMY K G + +AR FD+M
Sbjct: 118 TLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEM 177
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQML--QSGVMPGQFTFGSIIKACSGLGSVCL 154
P+RN VSW MI+G + ++A +L+ M + G +F F S++ A + V
Sbjct: 178 PERNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNT 237
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
GRQ+H+ +K+ + NAL+ MY K + DA F K+ +W +M+ F++
Sbjct: 238 GRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQ 297
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------- 251
G +AL F +M H P+EF V +ACS+
Sbjct: 298 FGDSDKALKLFYDM-HQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLY 356
Query: 252 -----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
AR F I PD+ W ++I G + + A++L+ +M+
Sbjct: 357 VLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGG 416
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
++P+ LT+ S+L AC L QG Q+H+ IIK F +P+ +A+ MYAKC L +
Sbjct: 417 VIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGY 476
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F + D +SWN++I+ Q+ + E LF +M KPD++TF +++ AC+ M
Sbjct: 477 RIFWRMPAR-DVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHM 535
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNG-------LMDIYIKCGSLGSARKLFNFMENPDV 467
+V + Y + FD F + ++DI + G L A++ F+E+ V
Sbjct: 536 G---LVDRGWVYFK---MMFDEFNIAPTVEHYACMVDILSRAGKLHEAKE---FIESATV 586
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 160/345 (46%), Gaps = 42/345 (12%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPS-TYAGLISACSSLRSLQLGRKVHDHILLS 64
+S Q L +EA + ++ + + ++SA + + GR+VH + +
Sbjct: 189 ISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKN 248
Query: 65 KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
V + N ++ MY KCGSLEDA F+ +N ++W+AM+ G +Q + A+KL+
Sbjct: 249 GLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLF 308
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
M QSG +P +FT +I ACS ++ GRQ+H + +K + L +AL+ MY K
Sbjct: 309 YDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKC 368
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
I+DAR F I + DV W S+I + + G AL + +M G PN+ SV
Sbjct: 369 GSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKM-QLGGVIPNDLTMASV 427
Query: 245 FSACSNFARI----------------------------------------LFNEIDSPDL 264
ACSN A + +F + + D+
Sbjct: 428 LKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDV 487
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
SWNA+I+G++ + NE + LF +M PD +T +LL AC
Sbjct: 488 ISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSAC 532
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 151/289 (52%), Gaps = 23/289 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T G+I+ACS ++ GR++H + L + + + + +++MY KCGS+ DAR GF+ +
Sbjct: 322 TLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECI 381
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
Q +VV WT++I G QN A+ LY +M GV+P T S++KACS L ++ G+
Sbjct: 382 QQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGK 441
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+HA +IK + +AL AMY K + D +F + +DV SW +MI+ S+ G
Sbjct: 442 QMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNG 501
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNEID-SPDLAS 266
E L F +M G +P+ F ++ SACS+ + +++F+E + +P +
Sbjct: 502 RGNEGLELFEKMCLEGT-KPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEH 560
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
+ ++ ++ +EA +E + H L C+ R+ L
Sbjct: 561 YACMVDILSRAGKLHEA---------KEFIESATVDHGL---CLWRILL 597
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 143/295 (48%), Gaps = 15/295 (5%)
Query: 295 LLP---DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
LLP L V L C L +G +H+ I+ G S+ + N+++ +YAKCS
Sbjct: 3 LLPLSHQHLQVLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFS 62
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQ---HNQAEELFRLFSRMLASQ--IKPDHITFND 406
A LVF + N D VSWN +I A Q H + + LF +++ + I P+ T
Sbjct: 63 KANLVFDSI-NNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTG 121
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
V A + ++ Q H KT + DVF + L+++Y K G + AR LF+ M +
Sbjct: 122 VFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERN 181
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMR--SLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
VSW+++I GYA DEA +LF MR G + N VL+A + LV G +
Sbjct: 182 AVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQV 241
Query: 525 YRI-MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ + M+N G++ + +V + + G + +A +++ + + + W +++
Sbjct: 242 HSLAMKN--GLVCIVSVANALVTMYVKCGSLEDALKTF-ELSGNKNSITWSAMVT 293
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 177/553 (32%), Positives = 294/553 (53%), Gaps = 49/553 (8%)
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
PDVVL+ LN K G L DA FD+MP++NVV+WT++++G ++N + A+ ++ M
Sbjct: 46 PDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADM 105
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
++SGV P F + + AC+ LG++ G Q+H+ +++ + LI MY++ +
Sbjct: 106 VESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLG-YEL--EALCHFNEMLHHGAYQPNEFIFGSV 244
A+ VF + DV + S+I+AF + G +EL EAL +ML G +PNE ++
Sbjct: 166 PAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALI---QMLKQG-LKPNEHTMTTI 221
Query: 245 FSACS--------------------------------------NFARILFNEIDSPDLAS 266
+AC A+ +F+ + ++ S
Sbjct: 222 LTACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVS 281
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
W +++ EA+ +F +M + P+ + +L AC G + L G Q+H I
Sbjct: 282 WCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGAC-GSIGL--GRQLHCSAI 338
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
K +++ V NA+L+MY + ++ + ++ +N D VSW + I+A Q+ E+
Sbjct: 339 KHDLITDIRVSNALLSMYGRTGLVEELEAMLNKI-ENPDLVSWTTAISANFQNGFGEKAI 397
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
L +M + P+ F+ V+ +CA +ASL+ Q HC K G ++ N L+++Y
Sbjct: 398 ALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMY 457
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KCG +GSAR F+ M DV SW+SLI G+AQ G ++AL++F++MRS G+ P+ T +
Sbjct: 458 SKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFL 517
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
GVL C+H G+VEEG +R+M ++Y P H +C++D+L R G EA IN M
Sbjct: 518 GVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPF 577
Query: 567 DADIVVWKSLLAS 579
+ D ++WK+LLAS
Sbjct: 578 EPDALIWKTLLAS 590
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 230/492 (46%), Gaps = 63/492 (12%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ P+ +A + AC+ L +L+ G +VH + + D + + ++ MY +CGSL A+
Sbjct: 110 VAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAK 169
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+M +VV +T++I+ +N + A + IQML+ G+ P + T +I+ AC +
Sbjct: 170 EVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV- 228
Query: 151 SVCLGRQLHAHVIKS--EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
LG+Q+H ++IK + + ALI Y++ A+ VF + K+V SW SM
Sbjct: 229 ---LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSM 285
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-------------------- 248
+ + + G EAL F +M+ G PNEF V AC
Sbjct: 286 MQLYIRDGRLEEALQVFGDMISEGV-DPNEFALSIVLGACGSIGLGRQLHCSAIKHDLIT 344
Query: 249 ---------SNFARI--------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
S + R + N+I++PDL SW I+ + +A++L +M
Sbjct: 345 DIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMH 404
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
P+G S+L +C +L QGMQ H +K+G DS + NA++ MY+KC +
Sbjct: 405 SEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMG 464
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A L F ++ D SWNS+I QH A + +FS+M ++ IKPD TF V+ C
Sbjct: 465 SARLAF-DVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGC 523
Query: 412 AKMASLE--------MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
+E M+ Q + A ++D+ + G A ++ N M
Sbjct: 524 NHSGMVEEGELFFRLMIDQYSFTPAPSHYAC-------MIDMLGRNGRFDEALRMINDMP 576
Query: 464 -NPDVVSWSSLI 474
PD + W +L+
Sbjct: 577 FEPDALIWKTLL 588
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 147/298 (49%), Gaps = 24/298 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++ AC S+ LGR++H + D+ + N +L+MYG+ G +E+ +K+ +
Sbjct: 320 VLGACGSI---GLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPD 376
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+VSWT I+ QN AI L QM G P + F S++ +C+ + S+ G Q H
Sbjct: 377 LVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHC 436
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+K S + NALI MY+K ++ AR F + DVTSW S+I ++ G +
Sbjct: 437 LALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANK 496
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNEID-SPDLASWNAL 270
AL F++M +G +P++ F V C++ F R++ ++ +P + + +
Sbjct: 497 ALEVFSKMRSNG-IKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACM 555
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC-------IGRLTLYQGMQV 321
I + + +EA+ + ++M PD L +LL +C IG+L + M++
Sbjct: 556 IDMLGRNGRFDEALRMINDM---PFEPDALIWKTLLASCKLHRNLDIGKLAADRLMEL 610
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 6/204 (2%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN + E +A ++ ++ ++S+C+ + SL G + H L C ++
Sbjct: 389 QNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEIC 448
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
N ++NMY KCG + AR+ FD M +V SW ++I G +Q+ N A++++ +M +G
Sbjct: 449 TGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNG 508
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK----SEHGSHLIAQNALIAMYTKFDRI 187
+ P TF ++ C+ G V G +I + SH ++ +FD
Sbjct: 509 IKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEA 568
Query: 188 LDARNVFSGIARKDVTSWGSMIAA 211
L R + D W +++A+
Sbjct: 569 L--RMINDMPFEPDALIWKTLLAS 590
>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 175/515 (33%), Positives = 288/515 (55%), Gaps = 19/515 (3%)
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
PDVVL+ LN K G L DA FD+MP++NVV+WT++++GC++N + A+ ++ M
Sbjct: 46 PDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADM 105
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
++SGV P F + + AC+ LG++ G Q+H+ +++ + LI MY++ +
Sbjct: 106 VESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLG-YELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
A+ VF + DV + S+I+AF + G +EL A +ML G +PNE ++ +
Sbjct: 166 PAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEA-LIQMLKQG-LKPNEHTMTTILT 223
Query: 247 ACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM--RDRELLPDGLTVHS 304
AC R+L +I LI + S + + + + R+ + P+ +
Sbjct: 224 ACP---RVLGQQIH-------GYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSI 273
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
+L AC G + L G Q+H IK +++ V NA+L+MY + ++ + ++ +N
Sbjct: 274 VLGAC-GSIGL--GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKI-ENP 329
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
D VSW + I+A Q+ E+ L +M + P+ F+ V+ +CA +ASL+ Q H
Sbjct: 330 DLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFH 389
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
C K G ++ N L+++Y KCG +GSAR F+ M DV SW+SLI G+AQ G +
Sbjct: 390 CLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDAN 449
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV 544
+AL++F++MRS G+ P+ T +GVL C+H G+VEEG +R+M ++Y P H +C+
Sbjct: 450 KALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACM 509
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+D+L R G EA IN M + D ++WK+LLAS
Sbjct: 510 IDMLGRNGRFDEALRMINDMPFEPDALIWKTLLAS 544
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 120/494 (24%), Positives = 209/494 (42%), Gaps = 107/494 (21%)
Query: 6 VSSLCKQNLYNEALVAY--DFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHI 61
V S C +N EA +A D ++ + P+ +A + AC+ L +L+ G +VH
Sbjct: 85 VMSGCTRNGRPEAALAMFADMVESG----VAPNDFACNAALVACADLGALRAGEQVHSLA 140
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ + D + + ++ MY +CGSL A+ FD+M +VV +T++I+ +N + A
Sbjct: 141 VRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAA 200
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACS---------------GL----------------- 149
+ IQML+ G+ P + T +I+ AC GL
Sbjct: 201 EALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSR 260
Query: 150 ------------------GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
GS+ LGRQLH IK + + + NAL++MY + + +
Sbjct: 261 NEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELE 320
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF 251
+ + I D+ SW + I+A + G+ +A+ +M H + PN + F SV S+C++
Sbjct: 321 AMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQM-HSEGFTPNGYAFSSVLSSCADV 379
Query: 252 ----------------------------------------ARILFNEIDSPDLASWNALI 271
AR+ F+ + + D+ SWN+LI
Sbjct: 380 ASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLI 439
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
G A H +AN+A+ +FS+MR + PD T +L C + +G +I
Sbjct: 440 HGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSF 499
Query: 332 SNVPVCNA-ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AE 383
+ P A ++ M + AL + ++ D++ W +++A+C H A+
Sbjct: 500 TPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAAD 559
Query: 384 ELFRLFSRMLASQI 397
L L R AS +
Sbjct: 560 RLMELSDRDSASYV 573
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 190/635 (29%), Positives = 314/635 (49%), Gaps = 85/635 (13%)
Query: 25 SQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCG 84
S NT + T+ LI+ + R++H + ++ L N ++N+Y + G
Sbjct: 89 SHCNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIG 148
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
L A+ FD+M RN+V+W +I+G +QN + ++A + M+++G +P + FGS ++
Sbjct: 149 DLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALR 208
Query: 145 AC--SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK-FDRILDARNVFSGIARKD 201
AC SG LG Q+H + K+ +GS ++ N LI+MY D DAR+VF GI ++
Sbjct: 209 ACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRN 268
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHG---AYQPN----EFIF------------- 241
SW S+I+ +S+ G + A F+ M G +++PN EF
Sbjct: 269 SISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKGREVHA 328
Query: 242 -------------------------GSVFSACSNFARILFNEIDSPDLASWNALIAGVAS 276
G++ ACS F ++ D SWN+LI+G+
Sbjct: 329 HVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMV-----EKDSVSWNSLISGLDQ 383
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSL------------------------------- 305
+ + +A +FS M + + + + +L
Sbjct: 384 NECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFIN 443
Query: 306 LCACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
+ + + L+L++ Q+H+ ++K + + NA+L+ Y KC + +F + +
Sbjct: 444 ILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETR 503
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
D VSWNS+I+ + + + L M+ + D TF ++ ACA +A+LE ++H
Sbjct: 504 DEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVH 563
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
+ L DV V + L+D+Y KCG + A + F M +V SW+S+I GYA+ G G+
Sbjct: 564 ACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGE 623
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV 544
+ALKLFTRM G P+ VT VGVL+ACSHVG VEEG ++ M Y + P EH SC+
Sbjct: 624 KALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCM 683
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
VDLL RAG + E DFIN M ++++W+++L +
Sbjct: 684 VDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGA 718
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 190/599 (31%), Positives = 299/599 (49%), Gaps = 54/599 (9%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
+R T+ ++ AC+ L L GR +H I+ S + VL N +L++YG CG +
Sbjct: 120 QQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCV 179
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
A + F+KM +R++VSW A IA +Q+ A++L+ +M GV P + T + C
Sbjct: 180 ASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVC 238
Query: 147 SGLGSVCLGRQLHA-HVIKSEHG--SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
+ + RQ A H I E G L+ AL + Y + + A+ VF A +DV
Sbjct: 239 ATI------RQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVV 292
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN--FARI------- 254
SW +M+ A+++ G+ EA F MLH G P++ + + CS+ F R+
Sbjct: 293 SWNAMLGAYAQHGHMSEAALLFARMLHEG-ISPSKVTLVNASTGCSSLRFGRMIHGCALE 351
Query: 255 ---------------LFNEIDSPDLA------------SWNALIAGVASHSNANEAMSLF 287
++ SP+ A SWN +IAG + A+ LF
Sbjct: 352 KGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPCNAVSWNTMIAGSSQKGQMKRAVELF 411
Query: 288 SEMRDRELLPDGLTVHSLLCACIGR----LTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
M+ + P T +LL A + +G ++HS I+ G+ S + A++ M
Sbjct: 412 QRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKM 471
Query: 344 YAKCSVLCNALLVFKE--LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
YA C + A F+ + D VSWN+II++ QH + F RM + P+
Sbjct: 472 YASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQ 531
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
IT V+ ACA A+L +H ++ +G+ ++FV L +Y +CGSL SAR++F
Sbjct: 532 ITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEK 591
Query: 462 ME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
+ DVV ++++I Y+Q G EALKLF RM+ G P+ + V VL+ACSH GL +E
Sbjct: 592 VAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADE 651
Query: 521 GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G ++R M YGI P+ +H +C VD+L RAG + +AE+ I M ++VWK+LL +
Sbjct: 652 GWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGA 710
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 164/590 (27%), Positives = 276/590 (46%), Gaps = 54/590 (9%)
Query: 34 RPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
RP+ L+ A R L GR++H I+ + + L NH+L +Y KC SL D F
Sbjct: 28 RPAHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVF 85
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
++ R+ SWT +I +++ Q AI ++ +M Q GV TF +++KAC+ LG +
Sbjct: 86 SRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLS 145
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
GR +HA +++S + N L+ +Y + A +F + R D+ SW + IAA +
Sbjct: 146 QGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKMER-DLVSWNAAIAANA 204
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC------------------------- 248
+ G AL F M G +P + C
Sbjct: 205 QSGDLGIALELFQRMQLEGV-RPARITLVIALTVCATIRQAQAIHFIVRESGLEQTLVVS 263
Query: 249 ----SNFARI--------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
S +AR+ +F+ D+ SWNA++ A H + +EA LF+ M +
Sbjct: 264 TALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIS 323
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P +T L+ A G +L G +H ++ G D ++ + NA+L MY +C A +
Sbjct: 324 PSKVT---LVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHL 380
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA---- 412
FK + NA VSWN++IA Q Q + LF RM + P T+ +++ A A
Sbjct: 381 FKRIPCNA--VSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPE 438
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN--FMENP-DVVS 469
+ ++ +LH I G A + + ++ +Y CG++ A F ME+ DVVS
Sbjct: 439 EARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVS 498
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+++I +Q G G AL F RM GV+PN +T V VL AC+ + EG ++ +
Sbjct: 499 WNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLR 558
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ G+ + + + R G + A + ++A + D+V++ +++A+
Sbjct: 559 HS-GMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 177/553 (32%), Positives = 294/553 (53%), Gaps = 49/553 (8%)
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
PDVVL+ LN K G L DA FD+MP++NVV+WT++++G ++N + A+ ++ M
Sbjct: 46 PDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADM 105
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
++SGV P F + + AC+ LG++ G Q+H+ +++ + LI MY++ +
Sbjct: 106 VESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLG-YEL--EALCHFNEMLHHGAYQPNEFIFGSV 244
A+ VF + DV + S+I+AF + G +EL EAL +ML G +PNE ++
Sbjct: 166 PAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALI---QMLKQG-LKPNEHTMTTI 221
Query: 245 FSACS--------------------------------------NFARILFNEIDSPDLAS 266
+AC A+ +F+ + ++ S
Sbjct: 222 LTACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVS 281
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
W +++ EA+ +F +M + P+ + +L AC G + L G Q+H I
Sbjct: 282 WCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGAC-GSIGL--GRQLHCSAI 338
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
K +++ V NA+L+MY + ++ + ++ +N D VSW + I+A Q+ E+
Sbjct: 339 KHDLITDIRVSNALLSMYGRTGLVEELEAMLNKI-ENPDLVSWTTAISANFQNGFGEKAI 397
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
L +M + P+ F+ V+ +CA +ASL+ Q HC K G ++ N L+++Y
Sbjct: 398 ALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMY 457
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KCG +GSAR F+ M DV SW+SLI G+AQ G ++AL++F++MRS G+ P+ T +
Sbjct: 458 SKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFL 517
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
GVL C+H G+VEEG +R+M ++Y P H +C++D+L R G EA IN M
Sbjct: 518 GVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPF 577
Query: 567 DADIVVWKSLLAS 579
+ D ++WK+LLAS
Sbjct: 578 EPDALIWKTLLAS 590
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 230/492 (46%), Gaps = 63/492 (12%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ P+ +A + AC+ L +L+ G +VH + + D + + ++ MY +CGSL A+
Sbjct: 110 VAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAK 169
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+M +VV +T++I+ +N + A + IQML+ G+ P + T +I+ AC +
Sbjct: 170 EVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV- 228
Query: 151 SVCLGRQLHAHVIKS--EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
LG+Q+H ++IK + + ALI Y++ A+ VF + K+V SW SM
Sbjct: 229 ---LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSM 285
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-------------------- 248
+ + + G EAL F +M+ G PNEF V AC
Sbjct: 286 MQLYIRDGRLEEALQVFGDMISEGV-DPNEFALSIVLGACGSIGLGRQLHCSAIKHDLIT 344
Query: 249 ---------SNFARI--------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
S + R + N+I++PDL SW I+ + +A++L +M
Sbjct: 345 DIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMH 404
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
P+G S+L +C +L QGMQ H +K+G DS + NA++ MY+KC +
Sbjct: 405 SEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMG 464
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A L F ++ D SWNS+I QH A + +FS+M ++ IKPD TF V+ C
Sbjct: 465 SARLAF-DVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGC 523
Query: 412 AKMASLE--------MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
+E M+ Q + A ++D+ + G A ++ N M
Sbjct: 524 NHSGMVEEGELFFRLMIDQYSFTPAPSHYAC-------MIDMLGRNGRFDEALRMINDMP 576
Query: 464 -NPDVVSWSSLI 474
PD + W +L+
Sbjct: 577 FEPDALIWKTLL 588
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 147/298 (49%), Gaps = 24/298 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++ AC S+ LGR++H + D+ + N +L+MYG+ G +E+ +K+ +
Sbjct: 320 VLGACGSI---GLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPD 376
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+VSWT I+ QN AI L QM G P + F S++ +C+ + S+ G Q H
Sbjct: 377 LVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHC 436
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+K S + NALI MY+K ++ AR F + DVTSW S+I ++ G +
Sbjct: 437 LALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANK 496
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNEID-SPDLASWNAL 270
AL F++M +G +P++ F V C++ F R++ ++ +P + + +
Sbjct: 497 ALEVFSKMRSNG-IKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACM 555
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC-------IGRLTLYQGMQV 321
I + + +EA+ + ++M PD L +LL +C IG+L + M++
Sbjct: 556 IDMLGRNGRFDEALRMINDM---PFEPDALIWKTLLASCKLHRNLDIGKLAADRLMEL 610
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 6/204 (2%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN + E +A ++ ++ ++S+C+ + SL G + H L C ++
Sbjct: 389 QNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEIC 448
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
N ++NMY KCG + AR+ FD M +V SW ++I G +Q+ N A++++ +M +G
Sbjct: 449 TGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNG 508
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK----SEHGSHLIAQNALIAMYTKFDRI 187
+ P TF ++ C+ G V G +I + SH ++ +FD
Sbjct: 509 IKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEA 568
Query: 188 LDARNVFSGIARKDVTSWGSMIAA 211
L R + D W +++A+
Sbjct: 569 L--RMINDMPFEPDALIWKTLLAS 590
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 189/585 (32%), Positives = 302/585 (51%), Gaps = 47/585 (8%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+TY ++ C+ L+SL+ G++VH I + D VL ++ MY CG L R FD
Sbjct: 58 NTYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDG 117
Query: 96 MPQRNVVSWTAMIAGCSQ--NYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
+ + W +++ ++ NY+E ++ L+ +M + G+ +TF ++K + V
Sbjct: 118 ILNDKIFLWNLLMSEYAKIGNYRE--SVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVR 175
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
+++H +V+K GS+ N+LIA Y K + AR +F ++ +DV SW SMI+ +
Sbjct: 176 ECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCT 235
Query: 214 KLGYELEALCHFNEMLHHG----------------------------AYQPNEFIFGSV- 244
G+ L F +ML+ G AY G V
Sbjct: 236 MNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVM 295
Query: 245 --------FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+S C N A +F ++ + SW ++IA EA+ LF EM+ +
Sbjct: 296 FNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKG 355
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
L PD V S++ AC +L +G +VH++I K SN+PV NA++ MYAKC + A
Sbjct: 356 LRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEAN 415
Query: 355 LVFKELG-KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
L+F +L KN VSWN++I Q++ E +LF M Q+KPD +T V+ ACA
Sbjct: 416 LIFSQLPVKNI--VSWNTMIGGYSQNSLPNEALQLFLDM-QKQLKPDDVTMACVLPACAG 472
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+A+LE ++H +I + G D+ V L+D+Y+KCG L A++LF+ + D++ W+ +
Sbjct: 473 LAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVM 532
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I GY G G EA+ F +MR G+ P + +L AC+H GL++EG L+ M++E
Sbjct: 533 IAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECN 592
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
I P EH +C+VDLL R+G + A FI M D +W +LL+
Sbjct: 593 IEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLS 637
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/521 (27%), Positives = 250/521 (47%), Gaps = 56/521 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S K Y E++ ++ Q IR T+ ++ ++ ++ ++VH ++L
Sbjct: 127 NLLMSEYAKIGNYRESVGLFEKMQE-LGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVL 185
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ N ++ Y KCG +E AR+ FD++ R+VVSW +MI+GC+ N + ++
Sbjct: 186 KLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLE 245
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+IQML GV T +++ AC+ +G++ LGR LHA+ +K+ ++ N L+ MY+
Sbjct: 246 FFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYS 305
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + A VF + + SW S+IAA + G EA+ F+EM G +P+ +
Sbjct: 306 KCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKG-LRPDIYAVT 364
Query: 243 SVFSAC----------------------SNF------------------ARILFNEIDSP 262
SV AC SN A ++F+++
Sbjct: 365 SVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVK 424
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
++ SWN +I G + +S NEA+ LF +M+ ++L PD +T+ +L AC G L +G ++H
Sbjct: 425 NIVSWNTMIGGYSQNSLPNEALQLFLDMQ-KQLKPDDVTMACVLPACAGLAALEKGREIH 483
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+I++ G+ S++ V A++ MY KC +L A +F + K D + W +IA H
Sbjct: 484 GHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKK-DMILWTVMIAGYGMHGFG 542
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL------HCYITKTGLAFDV 436
+E F +M + I+P+ +F ++ AC L+ +L C I +
Sbjct: 543 KEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYAC 602
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILG 476
V D+ I+ G+L A K M PD W +L+ G
Sbjct: 603 MV-----DLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSG 638
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 181/561 (32%), Positives = 291/561 (51%), Gaps = 49/561 (8%)
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
S + N+I++ Y KCG + A F + QR+ VSW MIAG A++
Sbjct: 28 SGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEF 87
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
M + G ++FGSI+K + +G V +G+Q+H+ ++K + ++ A +AL+ MY K
Sbjct: 88 LKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAK 147
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLG-----------YELEAL---------- 222
+R+ DA VF I ++ +W ++I+ ++++G ELE +
Sbjct: 148 CERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPL 207
Query: 223 ---------------CHFNEMLHHGAYQP----NEFIFGSVFSACSNFA---RILFNEID 260
H +++ HG N I + +S C + R+ I+
Sbjct: 208 LTLLDDPDLHKLTTQVH-AKIVKHGLASDTTVCNAII--TAYSECGSIEDAERVFDGAIE 264
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ DL +WN+++A ++ EA LF EM+ PD T S++ A QG
Sbjct: 265 TRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKS 324
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKC--SVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
+H +IK G + VP+ N+++ MY K + AL +F+ L +N D VSWNSI+ Q
Sbjct: 325 LHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESL-ENKDHVSWNSILTGFSQ 383
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+E+ + F M + + DH F+ V+ +C+ +A+L++ Q+H + K+G + FV
Sbjct: 384 SGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFV 443
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
+ L+ +Y KCG + ARK F+ ++W+SLI GYAQ G G AL LF M+ V
Sbjct: 444 ASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRV 503
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAE 558
+ +T V VLTACSH+GLVEEG + ME++YGI P EH +C++DLL RAG + EA+
Sbjct: 504 KLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAK 563
Query: 559 DFINQMACDADIVVWKSLLAS 579
I M + D +VWK+LL +
Sbjct: 564 ALIEAMPFEPDAMVWKTLLGA 584
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 228/493 (46%), Gaps = 49/493 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++ ++ + + +++G++VH ++ + +V + +L+MY KC +EDA F +
Sbjct: 102 SFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSI 161
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
RN V+W A+I+G +Q A L M GV TF ++ L
Sbjct: 162 NIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTT 221
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG-IARKDVTSWGSMIAAFSKL 215
Q+HA ++K S NA+I Y++ I DA VF G I +D+ +W SM+AA+
Sbjct: 222 QVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVN 281
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--------------------------- 248
E EA F EM G ++P+ + + SV SA
Sbjct: 282 NQEEEAFQLFLEMQVLG-FEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPI 340
Query: 249 ---------------SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
+ A +F +++ D SWN+++ G + + +A+ F MR +
Sbjct: 341 SNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQ 400
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
++ D ++L +C TL G QVH ++K GF+ N V ++++ MY+KC V+ +A
Sbjct: 401 YVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDA 460
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
F K++ S++WNS+I QH + + LF M ++K DHITF V+ AC+
Sbjct: 461 RKSFDATPKDS-SIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSH 519
Query: 414 MASLEM-VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWS 471
+ +E + L + G+ + ++D+ + G L A+ L M PD + W
Sbjct: 520 IGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWK 579
Query: 472 SLILGYAQFGCGD 484
+L LG + CGD
Sbjct: 580 TL-LGACR-TCGD 590
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 189/423 (44%), Gaps = 56/423 (13%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ I T+A L++ +L +VH I+ D + N I+ Y +CGS+EDA
Sbjct: 197 VEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAE 256
Query: 91 MGFD-KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
FD + R++V+W +M+A N QE +A +L+++M G P +T+ S+I A
Sbjct: 257 RVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEG 316
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK-FDRILD-ARNVFSGIARKDVTSWGS 207
G+ LH VIK + N+LIAMY K + +D A N+F + KD SW S
Sbjct: 317 SHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNS 376
Query: 208 MIAAFSKLGYELEALCHFNEM------LHHGA---------------------------- 233
++ FS+ G +AL F M + H A
Sbjct: 377 ILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSG 436
Query: 234 YQPNEFIFGSV---FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
++PN F+ S+ +S C AR F+ +WN+LI G A H A+ LF
Sbjct: 437 FEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFF 496
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP------VCNAILT 342
M+DR + D +T ++L AC + +G S++ M D +P C ++
Sbjct: 497 LMKDRRVKLDHITFVAVLTACSHIGLVEEGW---SFLKSMESDYGIPPRMEHYAC--MID 551
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP-DH 401
+ + L A + + + D++ W +++ AC E ++ S +L +++P +H
Sbjct: 552 LLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLL--ELEPEEH 609
Query: 402 ITF 404
T+
Sbjct: 610 CTY 612
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 178/397 (44%), Gaps = 32/397 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC--GSLEDARMGFD 94
TY +ISA G+ +H ++ + V + N ++ MY K S+++A F+
Sbjct: 305 TYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFE 364
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+ ++ VSW +++ G SQ+ DA+K + M V+ + F +++++CS L ++ L
Sbjct: 365 SLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQL 424
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+Q+H V+KS + ++LI MY+K I DAR F + +W S+I +++
Sbjct: 425 GQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQ 484
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS-----PDL 264
G AL F ++ + + F +V +ACS+ + ++S P +
Sbjct: 485 HGRGKIALDLFF-LMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRM 543
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
+ +I + +EA +L M PD + +LL AC + QV S+
Sbjct: 544 EHYACMIDLLGRAGRLDEAKALIEAM---PFEPDAMVWKTLLGACRTCGDIELASQVASH 600
Query: 325 IIKMGFDSNVPVCNAIL--TMYA---KCSVLCNALLVFKELG-KNADSVSW-------NS 371
++++ + + C +L +M+ + + + + KE G K SW S
Sbjct: 601 LLELEPEEH---CTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRS 657
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
A H EE++ ++ + D++ +++M
Sbjct: 658 FNAEDRSHPNCEEIYLRLGELMEEIRRLDYVANSEIM 694
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 24/276 (8%)
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
LY+ H IK G +++ N I++ YAKC + A +F E + D+VSWN++IA
Sbjct: 15 LYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQR-DAVSWNTMIA 73
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
+ E M D +F ++ A + +E+ Q+H + K G
Sbjct: 74 GFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEG 133
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
+VF + L+D+Y KC + A ++F + + V+W++LI GYAQ G A L M
Sbjct: 134 NVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCME 193
Query: 495 SLGVSPNLVTLVGV-----------LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
GV + T + LT H +V+ GL C+
Sbjct: 194 LEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGL------------ASDTTVCNA 241
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++ + G + +AE + D+V W S+LA+
Sbjct: 242 IITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAA 277
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 85/153 (55%), Gaps = 1/153 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + L +AL ++ + + + I ++ ++ +CS L +LQLG++VH +L
Sbjct: 375 NSILTGFSQSGLSEDALKFFE-NMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVL 433
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S +P+ + + ++ MY KCG +EDAR FD P+ + ++W ++I G +Q+ + A+
Sbjct: 434 KSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALD 493
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
L+ M V TF +++ ACS +G V G
Sbjct: 494 LFFLMKDRRVKLDHITFVAVLTACSHIGLVEEG 526
>gi|242062166|ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
gi|241932203|gb|EES05348.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
Length = 691
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 185/572 (32%), Positives = 291/572 (50%), Gaps = 45/572 (7%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP-QRNVVSWTAMIA 109
++ G +VH + ++ DV + N ++ MYG G +++A+ FD+ +RN VSW MI+
Sbjct: 116 VRFGAQVHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMIS 175
Query: 110 GCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGS 169
+N + DA+ ++ +M+ SG P +F F ++ AC+G GRQ+H V+++ +
Sbjct: 176 AYVKNDRCRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDK 235
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
+ NAL+ MY+K I A VF I DV SW ++IA G++ AL +M
Sbjct: 236 DVFTANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMK 295
Query: 230 HHGAYQPNEFIFGSVFSACS---------------------------------------- 249
G PN F SV AC+
Sbjct: 296 PLGVV-PNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFL 354
Query: 250 NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD--GLTVHSLLC 307
+ AR +F+ + DL WNALI+G + E +SLF MR L D T+ ++L
Sbjct: 355 DDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLK 414
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
+ + QVH+ K+G S+ V N ++ Y KC L A+ VF+E + D +
Sbjct: 415 STASLEAICHTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEESCSD-DII 473
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
S S++ A Q + E+ +LF +ML ++PD + ++ ACA +++ E Q+H ++
Sbjct: 474 SSTSMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQGKQVHAHL 533
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K DVF N L+ Y KCGS+ A F+ + VVSWS++I G AQ G G AL
Sbjct: 534 IKRQFTSDVFAGNALVYTYAKCGSIEDADMAFSGLPEKGVVSWSAMIGGLAQHGHGKRAL 593
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
+LF RM GV+PN +TL VL+AC+H GLV++ + M+ +GI T EH +C++D+
Sbjct: 594 ELFHRMLDEGVAPNNITLTSVLSACNHAGLVDDAKKYFESMKEAFGIDRTEEHYACMIDI 653
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
L RAG + +A + +N M A+ VW +LL +
Sbjct: 654 LGRAGKLKDAMELVNNMPFQANAAVWGALLGA 685
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/534 (28%), Positives = 253/534 (47%), Gaps = 50/534 (9%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P T ++ + RSL G +H H+L S NH+L+ Y +C AR FD
Sbjct: 4 PGTIGSALARFGASRSLLAGAHLHSHLLKSGLLAS--YSNHLLSFYSRCRLPSAARAVFD 61
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
++P VSW++++ S N DA+ + M GV ++ ++K V
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLKCAP---DVRF 118
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI-ARKDVTSWGSMIAAFS 213
G Q+HA + + + NAL+AMY F + +A+ +F ++ SW MI+A+
Sbjct: 119 GAQVHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYV 178
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------ 249
K +A+ F EM+ G +PNEF F V +AC+
Sbjct: 179 KNDRCRDAVGVFREMVWSGE-RPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDV 237
Query: 250 ----------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
A ++F +I + D+ SWNALIAG +H + + A+ L +M+
Sbjct: 238 FTANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPL 297
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
++P+ T+ S+L AC G G Q+H ++IK DS+ V ++ MYAK L +A
Sbjct: 298 GVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDA 357
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD--HITFNDVMGAC 411
VF + + D + WN++I+ C + E+ LF RM + D T V+ +
Sbjct: 358 RKVFDFMPRR-DLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLKST 416
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
A + ++ Q+H K GL D V+NGL+D Y KCG L A K+F + D++S +
Sbjct: 417 ASLEAICHTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEESCSDDIISST 476
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
S++ +Q G++A+KLF +M G+ P+ L +L AC+ + E+G ++
Sbjct: 477 SMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQGKQVH 530
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 233/489 (47%), Gaps = 52/489 (10%)
Query: 34 RPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP+ + + +++AC+ R + GR+VH ++ + DV N +++MY K G +E A +
Sbjct: 199 RPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDIEMAAV 258
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
F+K+P +VVSW A+IAGC + ++ A++L +QM GV+P FT S++KAC+G G+
Sbjct: 259 VFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGAGA 318
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
LGRQ+H +IK++ S L+ MY K + DAR VF + R+D+ W ++I+
Sbjct: 319 FNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRDLILWNALISG 378
Query: 212 FSKLGYELEALCHFNEMLHHG-AYQPNEFIFGSVFSACS--------------------- 249
S G E L F+ M G N +V + +
Sbjct: 379 CSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIGLL 438
Query: 250 -------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
++A +F E S D+ S +++ ++ + +A+ LF +M
Sbjct: 439 SDSHVVNGLIDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTALSQCDHGEDAIKLFVQM 498
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ L PD + SLL AC QG QVH+++IK F S+V NA++ YAKC +
Sbjct: 499 LRKGLEPDSFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSI 558
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
+A + F L + VSW+++I QH + LF RML + P++IT V+ A
Sbjct: 559 EDADMAFSGLPEKG-VVSWSAMIGGLAQHGHGKRALELFHRMLDEGVAPNNITLTSVLSA 617
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNG----LMDIYIKCGSLGSARKLFNFME-NP 465
C +V Y AF + ++DI + G L A +L N M
Sbjct: 618 CNHAG---LVDDAKKYFESMKEAFGIDRTEEHYACMIDILGRAGKLKDAMELVNNMPFQA 674
Query: 466 DVVSWSSLI 474
+ W +L+
Sbjct: 675 NAAVWGALL 683
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 174/345 (50%), Gaps = 21/345 (6%)
Query: 243 SVFSAC--SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
S +S C + AR +F+EI P SW++L+ +++ +A+ F MR R + +
Sbjct: 45 SFYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALWAFRSMRGRGVPCNEY 104
Query: 301 TVHSLL-CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+ +L CA R G QVH+ + +V V NA++ MY ++ A +F E
Sbjct: 105 ALPIVLKCAPDVRF----GAQVHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDE 160
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
G ++VSWN +I+A +++++ + +F M+ S +P+ F+ V+ AC E
Sbjct: 161 PGGERNAVSWNGMISAYVKNDRCRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWET 220
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
Q+H + +TG DVF N L+D+Y K G + A +F + DVVSW++LI G
Sbjct: 221 GRQVHGMVVRTGYDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVT 280
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM------ENEYG 533
G AL+L +M+ LGV PN+ TL VL AC+ G G ++ M +E+
Sbjct: 281 HGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFV 340
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +VD+ A+ G + +A + M D+++W +L++
Sbjct: 341 AVG-------LVDMYAKDGFLDDARKVFDFMP-RRDLILWNALIS 377
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 122/225 (54%), Gaps = 1/225 (0%)
Query: 26 QNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS 85
+ ++ + +T A ++ + +SL ++ ++VH D + N +++ Y KCG
Sbjct: 397 KEGLDLDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGR 456
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
L+ A F++ +++S T+M+ SQ DAIKL++QML+ G+ P F S++ A
Sbjct: 457 LDYAIKVFEESCSDDIISSTSMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNA 516
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
C+ L + G+Q+HAH+IK + S + A NAL+ Y K I DA FSG+ K V SW
Sbjct: 517 CASLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDADMAFSGLPEKGVVSW 576
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
+MI ++ G+ AL F+ ML G PN SV SAC++
Sbjct: 577 SAMIGGLAQHGHGKRALELFHRMLDEGV-APNNITLTSVLSACNH 620
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 76/122 (62%), Gaps = 2/122 (1%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ P ++ + L++AC+SL + + G++VH H++ + DV N ++ Y KCGS+EDA
Sbjct: 503 LEPDSFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDAD 562
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
M F +P++ VVSW+AMI G +Q+ A++L+ +ML GV P T S++ AC+ G
Sbjct: 563 MAFSGLPEKGVVSWSAMIGGLAQHGHGKRALELFHRMLDEGVAPNNITLTSVLSACNHAG 622
Query: 151 SV 152
V
Sbjct: 623 LV 624
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 6/164 (3%)
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
SL LH ++ K+GL N L+ Y +C +AR +F+ + +P VSWSSL+
Sbjct: 19 SLLAGAHLHSHLLKSGLL--ASYSNHLLSFYSRCRLPSAARAVFDEIPDPCHVSWSSLVT 76
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
Y+ G +AL F MR GV N L VL V + +H + +I
Sbjct: 77 AYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLKCAPDVRFGAQ-VHALAVATR---LI 132
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ +V + G V EA+ ++ + + V W ++++
Sbjct: 133 QDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISA 176
>gi|255568940|ref|XP_002525440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535253|gb|EEF36930.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 165/564 (29%), Positives = 291/564 (51%), Gaps = 42/564 (7%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN + E + + + + P ++ ++SAC+ + +G ++H + +
Sbjct: 267 QNGFGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLETY 326
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ N ++ +Y + G+ A+ F K+ ++ VS+ ++I+G SQ + A++L+ +M
Sbjct: 327 VCNALVTLYSRLGNFISAQQVFSKIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQLDH 386
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
+ P T S++ AC+ + S+ G QLH++ IK+ +I + +L+ +Y K I A
Sbjct: 387 LKPDCVTVASLLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAH 446
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF 251
F+ ++V W M+ A+ +L ++ C F +M G PN+F + S+ C++F
Sbjct: 447 KFFATTQTENVVLWNVMLVAYGQLDNLSKSFCIFRQMQIEGLI-PNQFTYPSILRTCTSF 505
Query: 252 ----------------------------------------ARILFNEIDSPDLASWNALI 271
AR + ++ D+ SW ALI
Sbjct: 506 GALDLGEQIHSQAIKTGFEFNVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALI 565
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
AG H EA++LF EM +R + D + S + AC G L QG Q+H+ G+
Sbjct: 566 AGYTQHDLFTEALNLFDEMLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISGYS 625
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
++ + NA++++YA+C + A L F+++ DS+SWN++++ Q EE ++F++
Sbjct: 626 EDLSIGNALVSLYARCGRIQEANLAFEKIDAK-DSISWNALMSGFAQSGYCEEALKIFAQ 684
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M + IK TF + A A MA+++ Q+H I KTG ++ V N L+ +Y KCG
Sbjct: 685 MTRANIKASLFTFGSAVSAAANMANIKQGKQIHAMIMKTGFDSEIEVSNALITLYAKCGC 744
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+ A++ F + + +SW+++I GY+Q GCG EA+ LF +M+ +G PN VT VGV++A
Sbjct: 745 IDGAKREFFEIPEKNEISWNAMITGYSQHGCGIEAVNLFQKMKQVGAKPNHVTFVGVISA 804
Query: 512 CSHVGLVEEGLHLYRIMENEYGII 535
CSHVGLV EGL + M E+G+I
Sbjct: 805 CSHVGLVNEGLAYFESMSKEHGLI 828
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 176/592 (29%), Positives = 288/592 (48%), Gaps = 53/592 (8%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
R + TY L+ C + S +K+H IL + VL + ++ Y G L
Sbjct: 84 RAKSQTYLWLLDFCLNSASFLDCKKLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVVK 143
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD MP R++++W +++G N N + L+ QM++ V P + T S+++A G G+
Sbjct: 144 VFDDMPSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPNEVTVASVLRA-YGSGN 202
Query: 152 VCLG--RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
V Q+HA +I G+ IA N LI +Y K I AR VF + KD SW ++I
Sbjct: 203 VAFYYVEQIHASIISRGLGTSSIACNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVI 262
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------- 249
+++S+ G+ EA+ F EM H P ++F SV SAC+
Sbjct: 263 SSYSQNGFGEEAIRLFCEM-HISGLSPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGF 321
Query: 250 ------------------NF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
NF A+ +F++I D S+N+LI+G++ ++ A+ LF +
Sbjct: 322 FLETYVCNALVTLYSRLGNFISAQQVFSKIKCKDEVSYNSLISGLSQQGCSDRALELFKK 381
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M+ L PD +TV SLL AC +L +G Q+HSY IK G ++ + ++L +Y KCS
Sbjct: 382 MQLDHLKPDCVTVASLLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSD 441
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ A F + + V WN ++ A Q + + F +F +M + P+ T+ ++
Sbjct: 442 ITTAHKFFATT-QTENVVLWNVMLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILR 500
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
C +L++ Q+H KTG F+V+V + L+D+Y K G L AR + + DVVS
Sbjct: 501 TCTSFGALDLGEQIHSQAIKTGFEFNVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVS 560
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W++LI GY Q EAL LF M + G+ + + ++AC+ + + +G +I
Sbjct: 561 WTALIAGYTQHDLFTEALNLFDEMLNRGIQSDNIGFSSAISACAGIQALSQG---QQIHA 617
Query: 530 NEY--GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA-DIVVWKSLLA 578
Y G + +V L AR G + EA ++ DA D + W +L++
Sbjct: 618 QSYISGYSEDLSIGNALVSLYARCGRIQEANLAFEKI--DAKDSISWNALMS 667
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 222/452 (49%), Gaps = 47/452 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N +S L +Q + AL + Q + ++P T A L+SAC+S++SL G ++H +
Sbjct: 360 NSLISGLSQQGCSDRALELFKKMQLD---HLKPDCVTVASLLSACASIKSLSKGEQLHSY 416
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ + D++++ +L++Y KC + A F NVV W M+ Q + +
Sbjct: 417 AIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTENVVLWNVMLVAYGQLDNLSKS 476
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
++ QM G++P QFT+ SI++ C+ G++ LG Q+H+ IK+ ++ + LI M
Sbjct: 477 FCIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIKTGFEFNVYVCSVLIDM 536
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K ++ AR + + +DV SW ++IA +++ EAL F+EML+ G Q +
Sbjct: 537 YAKLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLFTEALNLFDEMLNRG-IQSDNIG 595
Query: 241 FGSVFSACSNF----------------------------------------ARILFNEID 260
F S SAC+ A + F +ID
Sbjct: 596 FSSAISACAGIQALSQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRIQEANLAFEKID 655
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ D SWNAL++G A EA+ +F++M + T S + A + QG Q
Sbjct: 656 AKDSISWNALMSGFAQSGYCEEALKIFAQMTRANIKASLFTFGSAVSAAANMANIKQGKQ 715
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H+ I+K GFDS + V NA++T+YAKC + A F E+ + + +SWN++I QH
Sbjct: 716 IHAMIMKTGFDSEIEVSNALITLYAKCGCIDGAKREFFEIPEK-NEISWNAMITGYSQHG 774
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
E LF +M KP+H+TF V+ AC+
Sbjct: 775 CGIEAVNLFQKMKQVGAKPNHVTFVGVISACS 806
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 142/245 (57%), Gaps = 2/245 (0%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
++ + +L+ EAL +D N I+ ++ ISAC+ +++L G+++H +S
Sbjct: 565 IAGYTQHDLFTEALNLFD-EMLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISG 623
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
D+ + N ++++Y +CG +++A + F+K+ ++ +SW A+++G +Q+ +A+K++
Sbjct: 624 YSEDLSIGNALVSLYARCGRIQEANLAFEKIDAKDSISWNALMSGFAQSGYCEEALKIFA 683
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
QM ++ + FTFGS + A + + ++ G+Q+HA ++K+ S + NALI +Y K
Sbjct: 684 QMTRANIKASLFTFGSAVSAAANMANIKQGKQIHAMIMKTGFDSEIEVSNALITLYAKCG 743
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I A+ F I K+ SW +MI +S+ G +EA+ F +M GA +PN F V
Sbjct: 744 CIDGAKREFFEIPEKNEISWNAMITGYSQHGCGIEAVNLFQKMKQVGA-KPNHVTFVGVI 802
Query: 246 SACSN 250
SACS+
Sbjct: 803 SACSH 807
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 92/166 (55%), Gaps = 2/166 (1%)
Query: 24 FSQ-NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGK 82
F+Q NI+ T+ +SA +++ +++ G+++H I+ + ++ + N ++ +Y K
Sbjct: 682 FAQMTRANIKASLFTFGSAVSAAANMANIKQGKQIHAMIMKTGFDSEIEVSNALITLYAK 741
Query: 83 CGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI 142
CG ++ A+ F ++P++N +SW AMI G SQ+ +A+ L+ +M Q G P TF +
Sbjct: 742 CGCIDGAKREFFEIPEKNEISWNAMITGYSQHGCGIEAVNLFQKMKQVGAKPNHVTFVGV 801
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
I ACS +G V G + K EHG + ++ + FD+++
Sbjct: 802 ISACSHVGLVNEGLAYFESMSK-EHGLIIGLEDFHVKAIFSFDKLI 846
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
C AS +LH I K G + + + L++ Y G L S K+F+ M + +++W
Sbjct: 97 CLNSASFLDCKKLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVVKVFDDMPSRSLMTW 156
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV---EEGLHLYRI 527
+ ++ G + L LF +M V+PN VT+ VL A + E +H I
Sbjct: 157 NKVLSGLVANKTSNRVLGLFAQMVEENVNPNEVTVASVLRAYGSGNVAFYYVEQIHASII 216
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G+ + C+ ++DL A+ G + A +++ C D V W ++++S
Sbjct: 217 SR---GLGTSSIACNPLIDLYAKNGFIRSARKVFDEL-CMKDSVSWVAVISS 264
>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74600, chloroplastic; Flags: Precursor
gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 895
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 297/584 (50%), Gaps = 47/584 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDK 95
TY+ +++AC+SL L+ G+ V ++ KC DV + I+++Y KCG + +A F +
Sbjct: 253 TYSSVLAACASLEKLRFGKVVQARVI--KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSR 310
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+P +VVSWT M++G +++ A++++ +M SGV T S+I AC VC
Sbjct: 311 IPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA 370
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG---IARKDVTSWGSMIAAF 212
Q+HA V KS ALI+MY+K I + VF I R+++ + MI +F
Sbjct: 371 SQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSF 428
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA--CSNFAR----------------- 253
S+ +A+ F ML G + +EF S+ S C N +
Sbjct: 429 SQSKKPGKAIRLFTRMLQEG-LRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTV 487
Query: 254 ------------------ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
LF I D A W ++I+G + EA+ LFSEM D
Sbjct: 488 GSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGT 547
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD T+ ++L C +L +G ++H Y ++ G D + + +A++ MY+KC L A
Sbjct: 548 SPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQ 607
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
V+ L D VS +S+I+ QH ++ F LF M+ S D + ++ A A
Sbjct: 608 VYDRL-PELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSD 666
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+ Q+H YITK GL + V + L+ +Y K GS+ K F+ + PD+++W++LI
Sbjct: 667 ESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIA 726
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
YAQ G +EAL+++ M+ G P+ VT VGVL+ACSH GLVEE M +YGI
Sbjct: 727 SYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIE 786
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P H C+VD L R+G + EAE FIN M D +VW +LLA+
Sbjct: 787 PENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAA 830
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 156/576 (27%), Positives = 275/576 (47%), Gaps = 52/576 (9%)
Query: 46 SSLRSLQLGRKVHDHILLSKCQP-DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSW 104
S L +L+ + + H+L P DV L +L+ Y GS+ DA FD +PQ +VVS
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 105 TAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK 164
MI+G Q+ ++++ + +M G + ++GS+I ACS L + + H IK
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIK 178
Query: 165 SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCH 224
+ + + ++ALI +++K R DA VF +V W ++IA +
Sbjct: 179 MGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDL 238
Query: 225 FNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------------------ 254
F+EM G +P+ + + SV +AC++ ++
Sbjct: 239 FHEMC-VGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAK 297
Query: 255 ---------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
+F+ I +P + SW +++G ++A A+ +F EMR + + TV S+
Sbjct: 298 CGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSV 357
Query: 306 LCACIGRLTLY-QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
+ AC GR ++ + QVH+++ K GF + V A+++MY+K + + VF++L
Sbjct: 358 ISAC-GRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQ 416
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
N +I + Q + + RLF+RML ++ D + ++ + L + Q+H
Sbjct: 417 RQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVH 473
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
Y K+GL D+ V + L +Y KCGSL + KLF + D W+S+I G+ ++G
Sbjct: 474 GYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLR 533
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCS 542
EA+ LF+ M G SP+ TL VLT CS + G +H Y + GI + S
Sbjct: 534 EAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL---RAGIDKGMDLGS 590
Query: 543 CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+V++ ++ G + A +++ + D V SL++
Sbjct: 591 ALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSLIS 625
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 149/583 (25%), Positives = 259/583 (44%), Gaps = 47/583 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+Y +ISACS+L++ V H + V+++ +++++ K EDA F
Sbjct: 152 SYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDS 211
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
NV W +IAG +N L+ +M P +T+ S++ AC+ L + G+
Sbjct: 212 LSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGK 271
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+ A VIK + A++ +Y K + +A VFS I V SW M++ ++K
Sbjct: 272 VVQARVIKC-GAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSN 330
Query: 217 YELEALCHFNEMLHHG-----------------------AYQPNEFIFGSVFSACSNFAR 253
AL F EM H G A Q + ++F S F S+ A
Sbjct: 331 DAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAA 390
Query: 254 IL----------------FNEIDSPDLASW-NALIAGVASHSNANEAMSLFSEMRDRELL 296
L F ++D + N +I + +A+ LF+ M L
Sbjct: 391 ALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLR 450
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
D +V SLL + + L L G QVH Y +K G ++ V +++ T+Y+KC L + +
Sbjct: 451 TDEFSVCSLL-SVLDCLNL--GKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKL 507
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F+ + D+ W S+I+ ++ E LFS ML PD T V+ C+ S
Sbjct: 508 FQGI-PFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPS 566
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L ++H Y + G+ + + + L+++Y KCGSL AR++++ + D VS SSLI G
Sbjct: 567 LPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISG 626
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y+Q G + LF M G + + + +L A + G ++ + + G+
Sbjct: 627 YSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYI-TKIGLCT 685
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
S ++ + ++ G + + +Q+ D++ W +L+AS
Sbjct: 686 EPSVGSSLLTMYSKFGSIDDCCKAFSQIN-GPDLIAWTALIAS 727
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 231/506 (45%), Gaps = 54/506 (10%)
Query: 16 NEALVAYDFSQN--NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQ 73
N+A A + + ++ + I T +ISAC + +VH + S D +
Sbjct: 330 NDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVA 389
Query: 74 NHILNMYGKCGSLEDARMGF---DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+++MY K G ++ + F D + ++N+V+ MI SQ+ + AI+L+ +MLQ
Sbjct: 390 AALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQE 447
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G+ +F+ S++ S L + LG+Q+H + +KS L ++L +Y+K + ++
Sbjct: 448 GLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEES 504
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
+F GI KD W SMI+ F++ GY EA+ F+EML G P+E +V + CS+
Sbjct: 505 YKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGT-SPDESTLAAVLTVCSS 563
Query: 251 ----------------------------------------FARILFNEIDSPDLASWNAL 270
AR +++ + D S ++L
Sbjct: 564 HPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSL 623
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I+G + H + LF +M D + S+L A G QVH+YI K+G
Sbjct: 624 ISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGL 683
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+ V +++LTMY+K + + F ++ D ++W ++IA+ QH +A E ++++
Sbjct: 684 CTEPSVGSSLLTMYSKFGSIDDCCKAFSQI-NGPDLIAWTALIASYAQHGKANEALQVYN 742
Query: 391 RMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
M KPD +TF V+ AC+ + E L+ + G+ + ++D +
Sbjct: 743 LMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRS 802
Query: 450 GSLGSARKLFNFME-NPDVVSWSSLI 474
G L A N M PD + W +L+
Sbjct: 803 GRLREAESFINNMHIKPDALVWGTLL 828
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 172/382 (45%), Gaps = 42/382 (10%)
Query: 43 SACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVV 102
S S L L LG++VH + L S D+ + + + +Y KCGSLE++ F +P ++
Sbjct: 458 SLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNA 517
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
W +MI+G ++ +AI L+ +ML G P + T +++ CS S+ G+++H +
Sbjct: 518 CWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYT 577
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL 222
+++ + +AL+ MY+K + AR V+ + D S S+I+ +S+ G +
Sbjct: 578 LRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGF 637
Query: 223 CHFNEMLHHGAYQPNEFIFGSVFSAC---------------------------------- 248
F +M+ G + + F S+ A
Sbjct: 638 LLFRDMVMSG-FTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTM 696
Query: 249 -SNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
S F I F++I+ PDL +W ALIA A H ANEA+ +++ M+++ PD +T
Sbjct: 697 YSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTF 756
Query: 303 HSLLCACI-GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
+L AC G L ++S + G + ++ + L A +
Sbjct: 757 VGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMH 816
Query: 362 KNADSVSWNSIIAACLQHNQAE 383
D++ W +++AAC H + E
Sbjct: 817 IKPDALVWGTLLAACKIHGEVE 838
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 148/284 (52%), Gaps = 14/284 (4%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
ST A +++ CSS SL G+++H + L + + L + ++NMY KCGSL+ AR +D+
Sbjct: 552 STLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDR 611
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+P+ + VS +++I+G SQ+ D L+ M+ SG F SI+KA + LG
Sbjct: 612 LPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLG 671
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
Q+HA++ K + ++L+ MY+KF I D FS I D+ +W ++IA++++
Sbjct: 672 AQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQH 731
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--LFNEIDS--------PDLA 265
G EAL +N M G ++P++ F V SACS+ + + ++S P+
Sbjct: 732 GKANEALQVYNLMKEKG-FKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENR 790
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+ ++ + EA S + M + PD L +LL AC
Sbjct: 791 HYVCMVDALGRSGRLREAESFINNMH---IKPDALVWGTLLAAC 831
>gi|302142318|emb|CBI19521.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/526 (31%), Positives = 280/526 (53%), Gaps = 22/526 (4%)
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
++ H+ S V L L+ YGK G + A+ F++MP+R+VVSW A+I G S+N
Sbjct: 179 QIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNG 238
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+ DA+++++QML+ G P Q T ++ +C + G+ +H IKS +N
Sbjct: 239 YDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKN 298
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
AL +MY KF SW +MI A+ + G EA+ F +M
Sbjct: 299 ALTSMYAKF-------------------SWNTMIGAYGQNGLFDEAMLVFKQMQKERVEV 339
Query: 236 PNEFIFGSVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
I ++ C N A +L+N + +L S A+I+G A N + F++M
Sbjct: 340 NYVTIIMCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQL 399
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
++ PD + + S+L + G+ +H+Y +K G ++ V N +++MY+K +
Sbjct: 400 KMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETV 459
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
+F E+G+ +SWNS+I+AC+Q + + LF +M PD IT ++ C++
Sbjct: 460 FSLFSEMGEK-QLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSE 518
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ L+ +LH Y+ + L + F+ L+D+YIKCG L SA ++F ++ P + +W+++
Sbjct: 519 VGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTM 578
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I GY G AL ++ M+ G+ P+ +T +GVL+AC+H GLV EG +R M ++G
Sbjct: 579 ISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSMREDFG 638
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+IP +H +C+VDLL+RAG + EA F+ M + D +W +LL S
Sbjct: 639 MIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGALLTS 684
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 167/365 (45%), Gaps = 45/365 (12%)
Query: 61 ILLSKCQPDVVLQNH---ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQE 117
++ + Q + V N+ I+ Y CG++E A + ++ MPQRN+VS TAMI+G ++
Sbjct: 327 LVFKQMQKERVEVNYVTIIMCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNM 386
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
++ + QMLQ + P SI+ + + G +HA+ +K+ + + N L
Sbjct: 387 GLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGL 446
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
I+MY+KF I ++FS + K + SW S+I+A ++G +A+ F +M +G + P+
Sbjct: 447 ISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYG-HSPD 505
Query: 238 EFIFGSVFSACSNFARILFNE--------------------------------------- 258
S+ + CS + F E
Sbjct: 506 AITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFK 565
Query: 259 -IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
I P LA+WN +I+G + + A+S +SEM+++ L PD +T +L AC +++
Sbjct: 566 SIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWE 625
Query: 318 GMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
G + S G + ++ + ++ L A++ K + DS W +++ +C
Sbjct: 626 GKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGALLTSC 685
Query: 377 LQHNQ 381
H +
Sbjct: 686 CIHQE 690
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 146/305 (47%), Gaps = 15/305 (4%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQ 73
N LV F+Q ++++P A ++ + + G +H + L + D ++
Sbjct: 385 NMGLVVECFTQM-LQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVV 443
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N +++MY K G +E F +M ++ ++SW ++I+ C Q + +DA++L+ QM G
Sbjct: 444 NGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHS 503
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P T S++ CS +G + G +LH +V+++ + AL+ MY K R+ A V
Sbjct: 504 PDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERV 563
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN--- 250
F I + +W +MI+ + G+E AL ++EM G +P+ F V SAC++
Sbjct: 564 FKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQG-LKPDRITFLGVLSACTHGGL 622
Query: 251 ------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
+ R + + NA + + S + E +F +++ E+ PD +
Sbjct: 623 VWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIF--VKNMEVEPDSAIWGA 680
Query: 305 LLCAC 309
LL +C
Sbjct: 681 LLTSC 685
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 10/163 (6%)
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV-------- 420
++S+ +C + + F F R+L S +KP +TF+ ++ A AS V
Sbjct: 116 FHSLFKSCSETKDSRWAFITFRRLLESNVKPSDLTFSLLIKAYVADASSSTVIDSPNTKI 175
Query: 421 --TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
Q+ ++ K+G V++ +D Y K G + A+ LF M DVVSW++LI GY+
Sbjct: 176 EANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYS 235
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
+ G +AL++F +M G P TLVG++ +C ++ +G
Sbjct: 236 RNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQG 278
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 154/375 (41%), Gaps = 62/375 (16%)
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL-------- 313
P+++ +++L + ++ A F + + + P LT L+ A +
Sbjct: 111 PNISVFHSLFKSCSETKDSRWAFITFRRLLESNVKPSDLTFSLLIKAYVADASSSTVIDS 170
Query: 314 --TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
T + Q+ +++ K GF+ V + A L Y K + A +F+E+ + D VSWN+
Sbjct: 171 PNTKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRR-DVVSWNA 229
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+I ++ + +F +ML P T ++ +C + + +H + K+G
Sbjct: 230 LICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSG 289
Query: 432 LAFDVFVMNGLMDIYIK------------------------------------------- 448
L D V N L +Y K
Sbjct: 290 LDLDCRVKNALTSMYAKFSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIIMCSY 349
Query: 449 --CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
CG++ SA L+N M ++VS +++I GYA+ G ++ FT+M L + P+ V +V
Sbjct: 350 AGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMV 409
Query: 507 GVLTACSHVGLVEEGL--HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
+L + + GL H Y + + G+ + ++ + ++ G + ++M
Sbjct: 410 SILHGFTDPTFIGSGLGIHAYGL---KTGLCADCLVVNGLISMYSKFGDIETVFSLFSEM 466
Query: 565 ACDADIVVWKSLLAS 579
+ ++ W S++++
Sbjct: 467 G-EKQLISWNSVISA 480
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/489 (32%), Positives = 266/489 (54%), Gaps = 34/489 (6%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F+ + + N++ W M G + + A+ LY+ M+ G++P +TF ++K+C+ +
Sbjct: 45 FETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAF 104
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+Q+H HV+K + L +LI+MY + R+ DAR VF + +DV S+ ++I +
Sbjct: 105 REGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGY 164
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
+ GY A+ +F+EI D+ SWNA+I+
Sbjct: 165 ASKGYIAS-------------------------------AQKMFDEIPIKDVVSWNAMIS 193
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A N EA+ LF EM + PD T+ S++ AC ++ G QVHS+I GF S
Sbjct: 194 GYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGS 253
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N+ + NA++ +Y KC + A +F+ L D +SWN++I N +E LF M
Sbjct: 254 NLKIVNALIDLYIKCGEVETACGLFEGLSYK-DVISWNTLIGGYTHMNLYKEALLLFQEM 312
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFDVFVMNGLMDIYIKCG 450
L S P+ +T ++ ACA + ++E+ +H YI K G+A L+D+Y KCG
Sbjct: 313 LRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCG 372
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ +A+++F+ + N + SW+++I G+A G + A +F+RMR + P+ +T VG+L+
Sbjct: 373 DIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLS 432
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSH G+++ G H++R M+ +Y I P EH C++DLL +G EAE+ IN M + D
Sbjct: 433 ACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDG 492
Query: 571 VVWKSLLAS 579
V+W SLL +
Sbjct: 493 VIWCSLLKA 501
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 175/346 (50%), Gaps = 33/346 (9%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+A +F I P+L WN + G A S+ A+ L+ M LLP+ T LL +C
Sbjct: 40 YAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCA 99
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN------- 363
+G Q+H +++K+G+D ++ V ++++MY + L +A VF +
Sbjct: 100 KSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTA 159
Query: 364 -----------------------ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
D VSWN++I+ + +E LF M+ + ++PD
Sbjct: 160 LITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPD 219
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T V+ ACA+ AS+E+ Q+H +I G ++ ++N L+D+YIKCG + +A LF
Sbjct: 220 ESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFE 279
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
+ DV+SW++LI GY EAL LF M G SPN VT++ +L AC+H+G +E
Sbjct: 280 GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEI 339
Query: 521 G--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
G +H+Y I + G+ H + ++D+ A+ G + A+ + +
Sbjct: 340 GRWIHVY-INKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI 384
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 185/421 (43%), Gaps = 75/421 (17%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK- 95
T+ L+ +C+ ++ + G+++H H+L D+ + +++MY + G LEDAR FD+
Sbjct: 90 TFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQS 149
Query: 96 ------------------------------MPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+P ++VVSW AMI+G ++ +A++L+
Sbjct: 150 SHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFK 209
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M+++ V P + T S++ AC+ S+ LGRQ+H+ + GS+L NALI +Y K
Sbjct: 210 EMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 269
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A +F G++ KDV SW ++I ++ + EAL F EML G PN+ S+
Sbjct: 270 EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-SPNDVTMLSIL 328
Query: 246 SACSNFARI------------------------------------------LFNEIDSPD 263
AC++ I +F+ I +
Sbjct: 329 PACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRS 388
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV-H 322
L+SWNA+I G A H AN A +FS MR E+ PD +T LL AC L G +
Sbjct: 389 LSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFR 448
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
S + ++ + + A + + D V W S++ AC H
Sbjct: 449 SMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNV 508
Query: 383 E 383
E
Sbjct: 509 E 509
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 150/297 (50%), Gaps = 22/297 (7%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
TN+R ST ++SAC+ S++LGR+VH I ++ + N ++++Y KCG +E
Sbjct: 213 KTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVE 272
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
A F+ + ++V+SW +I G + +A+ L+ +ML+SG P T SI+ AC+
Sbjct: 273 TACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACA 332
Query: 148 GLGSVCLGRQLHAHVIKSEHG-----SHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
LG++ +GR +H ++ K G SH + +LI MY K I A+ VF I + +
Sbjct: 333 HLGAIEIGRWIHVYINKRLKGVANASSH---RTSLIDMYAKCGDIEAAQQVFDSILNRSL 389
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFN 257
+SW +MI F+ G A F+ M +P++ F + SACS + R +F
Sbjct: 390 SSWNAMIFGFAMHGRANAAFDIFSRM-RKNEIEPDDITFVGLLSACSHSGMLDLGRHIFR 448
Query: 258 EID-----SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+ +P L + +I + EA + + M E+ PDG+ SLL AC
Sbjct: 449 SMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTM---EMEPDGVIWCSLLKAC 502
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 7/160 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N + NLY EAL+ + Q P+ T ++ AC+ L ++++GR +H +
Sbjct: 290 NTLIGGYTHMNLYKEALLLF---QEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVY 346
Query: 61 I--LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
I L + +++MY KCG +E A+ FD + R++ SW AMI G + + + N
Sbjct: 347 INKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRAN 406
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
A ++ +M ++ + P TF ++ ACS G + LGR +
Sbjct: 407 AAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHI 446
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 191/626 (30%), Positives = 312/626 (49%), Gaps = 50/626 (7%)
Query: 1 FSNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTY-AGLISACSSLRSLQLGRKVHD 59
F+N+ + + +++A+ Y + +++ Y LI A L + GR++H
Sbjct: 75 FANNVIREYTEDGFFDDAIGVY-LKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHG 133
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
H+L DV + N +L MY KCG +EDA F+KMP+ ++VSW MI+G ++
Sbjct: 134 HVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTR 193
Query: 120 AIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
++ + M+ + G+ P + S I +CS L S+ GR++H V+KS ++LI
Sbjct: 194 SLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLI 253
Query: 179 AMYTKFDRILDARNVFSGI-----ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA 233
MY K I +A N+F+ I R++ W MI+ + G +AL F +M+ G
Sbjct: 254 EMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGI 313
Query: 234 YQPNEFIFGSVFSACS---------------------NFARI------------------ 254
+P+ S+FS CS N R+
Sbjct: 314 -KPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGL 372
Query: 255 -LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
+F + +L W+A+I+ A +A+ LF E + + L D + ++L AC
Sbjct: 373 KIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLT 432
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
+GMQ+H KMGF S+V V +A++ +YAKC + + VF L + D VSWN++I
Sbjct: 433 LKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQK-DLVSWNALI 491
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
+ Q A+E + F M +I+P+ +T ++ CA ++ + + ++H Y+ + GL
Sbjct: 492 SGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLG 551
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
V V N L+ Y KCG + S+ F M + VSW+S+ILG DE + LF +M
Sbjct: 552 STVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKM 611
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
+ G+ P+ VT +L+ACSH G V+EG ++ M ++ + P E +C+VDLL RAG
Sbjct: 612 VASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGH 671
Query: 554 VHEAEDFINQMACDADIVVWKSLLAS 579
+++A D I M C D +W SLL S
Sbjct: 672 LNQAYDLIMAMPCTPDDRIWGSLLGS 697
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 149/298 (50%), Gaps = 21/298 (7%)
Query: 237 NEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE---MRDR 293
N I S S F + +N I + I S S AN + ++E D
Sbjct: 33 NLVIVTSPVSCSLRFQKFNYNPIQKWSSKPLSTKIQTFVSVSFANNVIREYTEDGFFDDA 92
Query: 294 -----ELLPDGLTVHS------LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
++L DG+ V L+ A G +Y+G Q+H +++K+G +V V N++LT
Sbjct: 93 IGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLT 152
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS-QIKPDH 401
MY KC V+ +A+ +F+++ D VSWN++I+ + F M+ I P+
Sbjct: 153 MYWKCGVVEDAVQMFEKM-PEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNR 211
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
+ + +C+ + SL ++H + K+GL + ++++ L+++Y+KCGS+ +A +FN
Sbjct: 212 VACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNS 271
Query: 462 MENPDVVS-----WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
+ + D V W+ +I GY GC +AL LF +M G+ P+ T+V + + CS
Sbjct: 272 ILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSE 329
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 107/220 (48%), Gaps = 8/220 (3%)
Query: 366 SVSW-NSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT-FNDVMGACAKMASLEMVTQL 423
SVS+ N++I + ++ ++ +ML +K + F ++ A + + Q+
Sbjct: 72 SVSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQI 131
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H ++ K G+ DV V+N L+ +Y KCG + A ++F M D+VSW+++I G+ +
Sbjct: 132 HGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDY 191
Query: 484 DEALKLFTRM-RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCS 542
+L F M G+ PN V V + +CS + + G ++ ++ G+ S
Sbjct: 192 TRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKS-GLDVEEYLVS 250
Query: 543 CVVDLLARAGCVHEAEDFINQM----ACDADIVVWKSLLA 578
++++ + G + AE+ N + + + V+W +++
Sbjct: 251 SLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMIS 290
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/489 (32%), Positives = 266/489 (54%), Gaps = 34/489 (6%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F+ + + N++ W M G + + A+ LY+ M+ G++P +TF ++K+C+ +
Sbjct: 60 FETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAF 119
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+Q+H HV+K + L +LI+MY + R+ DAR VF + +DV S+ ++I +
Sbjct: 120 REGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGY 179
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
+ GY A+ +F+EI D+ SWNA+I+
Sbjct: 180 ASKGYIAS-------------------------------AQKMFDEIPIKDVVSWNAMIS 208
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A N EA+ LF EM + PD T+ S++ AC ++ G QVHS+I GF S
Sbjct: 209 GYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGS 268
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N+ + NA++ +Y KC + A +F+ L D +SWN++I N +E LF M
Sbjct: 269 NLKIVNALIDLYIKCGEVETACGLFEGLSYK-DVISWNTLIGGYTHMNLYKEALLLFQEM 327
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFDVFVMNGLMDIYIKCG 450
L S P+ +T ++ ACA + ++E+ +H YI K G+A L+D+Y KCG
Sbjct: 328 LRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCG 387
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ +A+++F+ + N + SW+++I G+A G + A +F+RMR + P+ +T VG+L+
Sbjct: 388 DIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLS 447
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSH G+++ G H++R M+ +Y I P EH C++DLL +G EAE+ IN M + D
Sbjct: 448 ACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDG 507
Query: 571 VVWKSLLAS 579
V+W SLL +
Sbjct: 508 VIWCSLLKA 516
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 175/346 (50%), Gaps = 33/346 (9%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+A +F I P+L WN + G A S+ A+ L+ M LLP+ T LL +C
Sbjct: 55 YAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCA 114
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN------- 363
+G Q+H +++K+G+D ++ V ++++MY + L +A VF +
Sbjct: 115 KSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTA 174
Query: 364 -----------------------ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
D VSWN++I+ + +E LF M+ + ++PD
Sbjct: 175 LITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPD 234
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T V+ ACA+ AS+E+ Q+H +I G ++ ++N L+D+YIKCG + +A LF
Sbjct: 235 ESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFE 294
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
+ DV+SW++LI GY EAL LF M G SPN VT++ +L AC+H+G +E
Sbjct: 295 GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEI 354
Query: 521 G--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
G +H+Y I + G+ H + ++D+ A+ G + A+ + +
Sbjct: 355 GRWIHVY-INKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI 399
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 185/421 (43%), Gaps = 75/421 (17%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK- 95
T+ L+ +C+ ++ + G+++H H+L D+ + +++MY + G LEDAR FD+
Sbjct: 105 TFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQS 164
Query: 96 ------------------------------MPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+P ++VVSW AMI+G ++ +A++L+
Sbjct: 165 SHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFK 224
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M+++ V P + T S++ AC+ S+ LGRQ+H+ + GS+L NALI +Y K
Sbjct: 225 EMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 284
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A +F G++ KDV SW ++I ++ + EAL F EML G PN+ S+
Sbjct: 285 EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-SPNDVTMLSIL 343
Query: 246 SACSNFARI------------------------------------------LFNEIDSPD 263
AC++ I +F+ I +
Sbjct: 344 PACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRS 403
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV-H 322
L+SWNA+I G A H AN A +FS MR E+ PD +T LL AC L G +
Sbjct: 404 LSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFR 463
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
S + ++ + + A + + D V W S++ AC +
Sbjct: 464 SMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANV 523
Query: 383 E 383
E
Sbjct: 524 E 524
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 150/297 (50%), Gaps = 22/297 (7%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
TN+R ST ++SAC+ S++LGR+VH I ++ + N ++++Y KCG +E
Sbjct: 228 KTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVE 287
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
A F+ + ++V+SW +I G + +A+ L+ +ML+SG P T SI+ AC+
Sbjct: 288 TACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACA 347
Query: 148 GLGSVCLGRQLHAHVIKSEHG-----SHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
LG++ +GR +H ++ K G SH + +LI MY K I A+ VF I + +
Sbjct: 348 HLGAIEIGRWIHVYINKRLKGVANASSH---RTSLIDMYAKCGDIEAAQQVFDSILNRSL 404
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFN 257
+SW +MI F+ G A F+ M +P++ F + SACS + R +F
Sbjct: 405 SSWNAMIFGFAMHGRANAAFDIFSRM-RKNEIEPDDITFVGLLSACSHSGMLDLGRHIFR 463
Query: 258 EID-----SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+ +P L + +I + EA + + M E+ PDG+ SLL AC
Sbjct: 464 SMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTM---EMEPDGVIWCSLLKAC 517
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 184/597 (30%), Positives = 309/597 (51%), Gaps = 50/597 (8%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHI----LLSKCQPD-VVLQNHILNMYGKCG 84
I+ S A +++ACS LR+L G++VH + LL +PD +L+N ++ MY +CG
Sbjct: 5 EIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCG 64
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
+ A FD+M +NVV+WT++I+ + DA+ L+ +ML SGV P + TF SI+
Sbjct: 65 CTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILL 124
Query: 145 ACSGLG-SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
SG ++ G+++H+H++++ + + N ++ MY K + A NVF I +V
Sbjct: 125 KWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVF 184
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-----ARIL--- 255
SW +IAA+++ G+ +E L + M G +P+ + F +V AC+ A+IL
Sbjct: 185 SWTIIIAAYAQNGHCMEVLRLLSRMNQAGV-KPDGYTFTTVLGACTAVGALEEAKILHAA 243
Query: 256 ---------------------------------FNEIDSPDLASWNALIAGVASHSNANE 282
F +ID+ D+ SW+++IA A A
Sbjct: 244 TISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKS 303
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
A+ L M + P+ +T ++L A G ++H+ I++ G+ +V + +A++
Sbjct: 304 AIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVK 363
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
MY + A +F E + D VSW+S+IA Q+ LF M ++P+ +
Sbjct: 364 MYCNWGWVETARSIF-ESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSV 422
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
TF + ACA + +L TQLH + GL DV V L+++Y KCG L A +F M
Sbjct: 423 TFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGM 482
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
+ ++++W+S+ + Y Q G G +LKL M G+ P+ + V +L +C++ G + +GL
Sbjct: 483 KKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGL 542
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
H Y +M ++GI P EHC C+VD+L RAG + AE IN M ++ + W LL +
Sbjct: 543 HYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSL-AWMMLLTA 598
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 191/419 (45%), Gaps = 46/419 (10%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK-CQPDVVLQNHILNMYGKCGS 85
N ++ T+ ++ AC+++ +L+ + +H + S D + ++N+YGKCG+
Sbjct: 210 NQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGA 269
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
LE+A F ++ +++VSW++MIA +Q+ Q AI+L + M GV P TF ++++A
Sbjct: 270 LEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEA 329
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
+ L + G+++HA ++++ + + +AL+ MY + + AR++F +DV SW
Sbjct: 330 VTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSW 389
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------- 251
SMIA +S+ AL F EM G QPN F S AC+
Sbjct: 390 SSMIAGYSQNESPARALSLFREMEVDGV-QPNSVTFVSAIDACAGVGALRRGTQLHERVR 448
Query: 252 --------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
A +F + +L +W ++ + + + ++
Sbjct: 449 CLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLK 508
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMY 344
L M + + PDG+ ++L +C + +G+ ++ + + G V C ++ +
Sbjct: 509 LLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDIL 568
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
+ L A + + K S++W ++ AC HN R ++ Q++P + T
Sbjct: 569 GRAGKLEAAEQLINTM-KFESSLAWMMLLTACKAHNDTARAARAAEKIF--QLEPKNAT 624
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 152/296 (51%), Gaps = 8/296 (2%)
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG-FDSNVP----VCNAILTMY 344
M RE+ + ++L AC L +G +VH +++ P + N ++ MY
Sbjct: 1 MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
+C AL VF + K+ + V+W S+I+A + LF +ML S + PD ITF
Sbjct: 61 LRCGCTDLALDVFDRM-KDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITF 119
Query: 405 NDV-MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
+ + + +L+ ++H +I +TG D VMN ++++Y KCG + A +F+ ++
Sbjct: 120 TSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQ 179
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
+P+V SW+ +I YAQ G E L+L +RM GV P+ T VL AC+ VG +EE
Sbjct: 180 DPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKI 239
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
L+ + G+ + +++L + G + EA Q+ + DIV W S++A+
Sbjct: 240 LHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQID-NKDIVSWSSMIAA 294
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 181/582 (31%), Positives = 302/582 (51%), Gaps = 47/582 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
+IS+C L+ LGR++ ++ S + + ++N +++M+G G+++ A F+++ +R+
Sbjct: 267 VISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERD 326
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+SW +++A +QN ++ +++ M + T +++ + GR +H
Sbjct: 327 TISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHG 386
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
V+K S + N L+ MY R +A VF + KD+ SW S++A+F G L+
Sbjct: 387 LVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLD 446
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSAC-------------------------------- 248
AL M+ G N F S +AC
Sbjct: 447 ALGILCSMIRTGK-SVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALV 505
Query: 249 ---------SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
S R+L ++ D+ +WNALI G A + + ++A++ F +R + +
Sbjct: 506 SMYGKIGGMSTSRRVLL-QMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANY 564
Query: 300 LTVHSLLCACI--GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+TV S+L AC+ G L L +G +H+YI+ GF+S+ V N+++TMYAKC L ++ +F
Sbjct: 565 ITVVSVLSACLVPGDL-LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 623
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
L N ++WN+I+AA H EE+ +L S+M + + D +F++ + A AK+A L
Sbjct: 624 NGL-DNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVL 682
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
E QLH K G D F+ N D+Y KCG +G K+ N + SW+ LI
Sbjct: 683 EEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISAL 742
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
+ G +E + F M +G+ P VT V +LTACSH GLV++GL Y ++ ++G+ P
Sbjct: 743 GRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPA 802
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EHC CV+DLL R+G + EAE FI++M + +VW+SLLAS
Sbjct: 803 IEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLAS 844
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 157/566 (27%), Positives = 275/566 (48%), Gaps = 47/566 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTY--AGLISACSSLRSL-QLGRKVHD 59
N +S + + LY E + +F Q ++ I+PS++ A L++AC S+ + G +VH
Sbjct: 128 NTMMSGIVRVGLYLEGM---EFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 184
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
+ S DV + IL++YG G + +R F++MP RNVVSWT+++ G S + +
Sbjct: 185 FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 244
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
I +Y M GV + + +I +C L LGRQ+ VIKS S L +N+LI+
Sbjct: 245 VIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLIS 304
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM----------- 228
M+ + A +F+ I+ +D SW S++AA+++ G+ E+ FN M
Sbjct: 305 MFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTT 364
Query: 229 ----------LHHGAYQPN------EFIFGSVFSACSNFAR------------ILFNEID 260
+ H + + F SV C+ R ++F ++
Sbjct: 365 VSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMP 424
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ DL SWN+L+A + + +A+ + M + +T S L AC +G
Sbjct: 425 TKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRI 484
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H ++ G N + NA+++MY K + + V ++ + D V+WN++I ++
Sbjct: 485 LHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRR-DVVAWNALIGGYAENE 543
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS-LEMVTQLHCYITKTGLAFDVFVM 439
++ F + + ++IT V+ AC LE LH YI G D V
Sbjct: 544 DPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVK 603
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
N L+ +Y KCG L S++ LFN ++N +++W++++ A G G+E LKL ++MRS G+S
Sbjct: 604 NSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLS 663
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLY 525
+ + L+A + + ++EEG L+
Sbjct: 664 LDQFSFSEGLSAAAKLAVLEEGQQLH 689
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 162/572 (28%), Positives = 277/572 (48%), Gaps = 54/572 (9%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ 113
GR +H + + V+ N ++NMY K G ++ AR FDKMP RN VSW M++G +
Sbjct: 77 GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136
Query: 114 NYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL-GRQLHAHVIKSEHGSHLI 172
+ ++ + +M G+ P F S++ AC GS+ G Q+H V KS S +
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 196
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
A++ +Y + + +R VF + ++V SW S++ +S G E + + M G
Sbjct: 197 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEG 256
Query: 233 AYQPNEFIFGSVFSACS----------------------------------------NFA 252
+ NE V S+C ++A
Sbjct: 257 V-ECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYA 315
Query: 253 RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
+FN+I D SWN+++A A + + E+ +F+ MR + TV +LL + +G
Sbjct: 316 NYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLL-SVLGD 374
Query: 313 LTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+ + G +H ++KMGFDS V VCN +L MYA A LVFK++ D +SWNS
Sbjct: 375 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQM-PTKDLISWNS 433
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
++A+ + ++ + + M+ + +++TF + AC + LH + +G
Sbjct: 434 LMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSG 493
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
L + + N L+ +Y K G + ++R++ M DVV+W++LI GYA+ D+AL F
Sbjct: 494 LFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQ 553
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVG-LVEEG--LHLYRIMENEYGIIPTREHC-SCVVDL 547
+R GVS N +T+V VL+AC G L+E G LH Y + + EH + ++ +
Sbjct: 554 TLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAG----FESDEHVKNSLITM 609
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
A+ G + ++D N + + I+ W ++LA+
Sbjct: 610 YAKCGDLSSSQDLFNGLD-NRSIITWNAILAA 640
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 173/384 (45%), Gaps = 41/384 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++AC S GR +H +++S + ++ N +++MYGK G + +R +M
Sbjct: 465 TFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQM 524
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC-LG 155
P+R+VV+W A+I G ++N + A+ + + GV T S++ AC G + G
Sbjct: 525 PRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERG 584
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ LHA+++ + S +N+LI MY K + ++++F+G+ + + +W +++AA +
Sbjct: 585 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHH 644
Query: 216 GYELEALCHFNEMLHHG----------------------------------AYQPNEFIF 241
G+ E L ++M G ++ + FIF
Sbjct: 645 GHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIF 704
Query: 242 GS---VFSACSNFARI--LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+ ++S C + + + L SWN LI+ + H E F EM + +
Sbjct: 705 NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIK 764
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALL 355
P +T SLL AC + QG+ + I K G + + C ++ + + L A
Sbjct: 765 PGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAET 824
Query: 356 VFKELGKNADSVSWNSIIAACLQH 379
++ + + W S++A+C H
Sbjct: 825 FISKMPMKPNDLVWRSLLASCKIH 848
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 152/334 (45%), Gaps = 21/334 (6%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
L+ G+ +H +I+ + + D ++N ++ MY KCG L ++ F+ + R++++W A++A
Sbjct: 581 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAA 640
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
+ + + +KL +M G+ QF+F + A + L + G+QLH +K
Sbjct: 641 NAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELD 700
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
NA MY+K I + + + + SW +I+A + GY E F+EML
Sbjct: 701 CFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLE 760
Query: 231 HGAYQPNEFIFGSVFSACSNFARI----LFNEIDSPDLASWNAL------IAGVASHSNA 280
G +P F S+ +ACS+ + + ++ + D A+ I +
Sbjct: 761 MG-IKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRL 819
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNA 339
EA + S+M + P+ L SLL +C L +G + + K+ D +V V ++
Sbjct: 820 AEAETFISKM---PMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSS 876
Query: 340 ILTMYAKCSVLCNALLVFKELG----KNADSVSW 369
M+A + V K++G K + SW
Sbjct: 877 --NMFATTGRWEDVENVRKQMGFKNIKKKQACSW 908
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/489 (32%), Positives = 267/489 (54%), Gaps = 34/489 (6%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F+ + + N++ W M G + + A+KLY+ M+ G++P +TF ++K+C+ +
Sbjct: 48 FETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAF 107
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+Q+H HV+K L +LI+MY + R+ DA VF +DV S+ ++I +
Sbjct: 108 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGY 167
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
+ GY +E A+ +F+EI D+ SWNA+I+
Sbjct: 168 ASRGY-IEN------------------------------AQKMFDEIPVKDVVSWNAMIS 196
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A N EA+ LF +M + PD T+ +++ AC ++ G QVHS+I GF S
Sbjct: 197 GYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGS 256
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N+ + NA++ +Y+KC L A +F+ L D +SWN++I N +E LF M
Sbjct: 257 NLKIVNALIDLYSKCGELETACGLFEGL-PYKDVISWNTLIGGYTHMNLYKEALLLFQEM 315
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFDVFVMNGLMDIYIKCG 450
L S P+ +T ++ ACA + ++++ +H YI K G+A + L+D+Y KCG
Sbjct: 316 LRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCG 375
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ +A ++FN + + + SW+++I G+A G D + +F+RMR G+ P+ +T VG+L+
Sbjct: 376 DIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLS 435
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSH G+++ G H++R M +Y + P EH C++DLL +G EAE+ IN M + D
Sbjct: 436 ACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDG 495
Query: 571 VVWKSLLAS 579
V+W SLL +
Sbjct: 496 VIWCSLLKA 504
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 173/346 (50%), Gaps = 33/346 (9%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+A +F I P+L WN + G A S+ A+ L+ M LLP+ T LL +C
Sbjct: 43 YAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCA 102
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG--------- 361
+G Q+H +++K+G D ++ V ++++MY + L +A VF E
Sbjct: 103 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTA 162
Query: 362 -----------KNA----------DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+NA D VSWN++I+ + +E LF M+ + ++PD
Sbjct: 163 LIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 222
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T V+ ACA+ S+E+ Q+H +I G ++ ++N L+D+Y KCG L +A LF
Sbjct: 223 ESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 282
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
+ DV+SW++LI GY EAL LF M G +PN VT++ +L AC+H+G ++
Sbjct: 283 GLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI 342
Query: 521 G--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
G +H+Y I + G+ + ++D+ A+ G + A N +
Sbjct: 343 GRWIHVY-IDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSI 387
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 195/438 (44%), Gaps = 77/438 (17%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L+ +C+ ++ + G+++H H+L C D+ + +++MY + G LEDA FD+
Sbjct: 93 TFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDES 152
Query: 97 PQRNVVSWTAMIAG-CSQNYQEN------------------------------DAIKLYI 125
P R+VVS+TA+I G S+ Y EN +A++L+
Sbjct: 153 PHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 212
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M+++ V P + T +++ AC+ GS+ LGRQ+H+ + GS+L NALI +Y+K
Sbjct: 213 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCG 272
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A +F G+ KDV SW ++I ++ + EAL F EML G PN+ S+
Sbjct: 273 ELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSIL 331
Query: 246 SACSNFARI------------------------------------------LFNEIDSPD 263
AC++ I +FN I
Sbjct: 332 PACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 391
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV-H 322
L+SWNA+I G A H A+ + +FS MR + PD +T LL AC L G +
Sbjct: 392 LSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFR 451
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
S + ++ + + A + + D V W S++ AC H
Sbjct: 452 SMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNV 511
Query: 383 EELFRLFSRMLASQIKPD 400
EL F++ L +I+P+
Sbjct: 512 -ELGESFAQNLI-KIEPE 527
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 161/319 (50%), Gaps = 17/319 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + Y EAL + TN+R ST ++SAC+ S++LGR+VH I
Sbjct: 192 NAMISGYAETGNYKEALELFK-DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWID 250
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ + N ++++Y KCG LE A F+ +P ++V+SW +I G + +A+
Sbjct: 251 DHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALL 310
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA--QNALIAM 180
L+ +ML+SG P T SI+ AC+ LG++ +GR +H ++ K G + + +LI M
Sbjct: 311 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDM 370
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K I A VF+ I K ++SW +MI F+ G + F+ M +G +P++
Sbjct: 371 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGI-EPDDIT 429
Query: 241 FGSVFSACS-----NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEM 290
F + SACS + R +F + +P L + +I + EA + + M
Sbjct: 430 FVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTM 489
Query: 291 RDRELLPDGLTVHSLLCAC 309
E+ PDG+ SLL AC
Sbjct: 490 ---EMEPDGVIWCSLLKAC 505
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 185/553 (33%), Positives = 285/553 (51%), Gaps = 50/553 (9%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
+ V N +++ Y K G+L +AR FD M +R V+WT +I G SQ Q +A +L++QM
Sbjct: 82 NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 141
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
+ G P TF +++ C+G Q+ +IK + S LI N L+ Y K +R+
Sbjct: 142 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLD 201
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV---- 244
A +F + D S+ +MI +SK G + +A+ F EM + G +P EF F +V
Sbjct: 202 LACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSG-LKPTEFTFAAVLCAN 260
Query: 245 --------------FSACSNF----------------------ARILFNEIDSPDLASWN 268
F +NF AR LF+E+ D S+N
Sbjct: 261 IGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYN 320
Query: 269 ALIAGVASHSNANEAMSLFSEMR----DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
+I+G A A LF E++ DR+ P ++L L G Q+H+
Sbjct: 321 VIISGYAWDGKHKYAFDLFRELQFTAFDRKQFP----FATMLSIASNTLDWEMGRQIHAQ 376
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
I DS + V N+++ MYAKC A ++F L + +V W ++I+A +Q EE
Sbjct: 377 TIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRS-AVPWTAMISAYVQKGFYEE 435
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
+LF++M + + D TF ++ A A +ASL + QLH +I K+G +VF + L+D
Sbjct: 436 GLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLD 495
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y KCGS+ A + F M + ++VSW+++I YAQ G + LK F M G+ P+ V+
Sbjct: 496 VYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVS 555
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
+GVL+ACSH GLVEEGL + M Y + P REH + VVD+L R+G +EAE + +M
Sbjct: 556 FLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEM 615
Query: 565 ACDADIVVWKSLL 577
D D ++W S+L
Sbjct: 616 PIDPDEIMWSSVL 628
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 234/486 (48%), Gaps = 56/486 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L+S C+ +V I+ +++ N +++ Y K L+ A F +M
Sbjct: 151 TFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEM 210
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+ + VS+ AMI G S++ + A+ L+++M SG+ P +FTF +++ A GL + LG+
Sbjct: 211 PEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQ 270
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H+ VIK+ ++ NAL+ Y+K D ++DAR +F + +D S+ +I+ ++ G
Sbjct: 271 QIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDG 330
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
A F E L A+ +F F ++ S SN
Sbjct: 331 KHKYAFDLFRE-LQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVG 389
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A ++F + W A+I+ E + LF++MR ++
Sbjct: 390 NSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVI 449
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
D T SLL A +L G Q+HS+IIK GF SNV +A+L +YAKC + +A+
Sbjct: 450 ADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQT 509
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F+E+ + + VSWN++I+A Q+ +AE + F M+ S ++PD ++F V+ AC+
Sbjct: 510 FQEM-PDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGL 568
Query: 417 LE-------MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVV 468
+E +TQ++ + V +D+ + G A KL M +PD +
Sbjct: 569 VEEGLWHFNSMTQIYKLDPRREHYASV------VDMLCRSGRFNEAEKLMAEMPIDPDEI 622
Query: 469 SWSSLI 474
WSS++
Sbjct: 623 MWSSVL 628
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 184/396 (46%), Gaps = 12/396 (3%)
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
+DAR V +G D + + F K G +A F +M H N I G V S
Sbjct: 39 IDARIVKTGF-DPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSG 97
Query: 248 CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC 307
AR LF+ + +W LI G + + EA LF +M+ PD +T +LL
Sbjct: 98 NLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLS 157
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
C G Q QV + IIK+G+DS + V N ++ Y K + L A +FKE+ + DSV
Sbjct: 158 GCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE-IDSV 216
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
S+N++I + E+ LF M S +KP TF V+ A + + + Q+H ++
Sbjct: 217 SYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFV 276
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
KT ++VFV N L+D Y K S+ ARKLF+ M D VS++ +I GYA G A
Sbjct: 277 IKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAF 336
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH----CSC 543
LF ++ +L+ S+ E G ++ I+ T + +
Sbjct: 337 DLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIH-----AQTIVTTADSEILVGNS 391
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+VD+ A+ G EAE + + V W +++++
Sbjct: 392 LVDMYAKCGKFEEAEMIFTNLTHRS-AVPWTAMISA 426
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 152/282 (53%), Gaps = 14/282 (4%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+A ++S S+ ++GR++H +++ ++++ N +++MY KCG E+A M F +
Sbjct: 354 FATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLT 413
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
R+ V WTAMI+ Q + ++L+ +M Q+ V+ Q TF S+++A + + S+ LG+Q
Sbjct: 414 HRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQ 473
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
LH+ +IKS S++ + +AL+ +Y K I DA F + +++ SW +MI+A+++ G
Sbjct: 474 LHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGE 533
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL-----FNEID-----SPDLASW 267
L F EM+ G QP+ F V SACS+ + FN + P +
Sbjct: 534 AEATLKSFKEMVLSG-LQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHY 592
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+++ + NEA L +EM + PD + S+L AC
Sbjct: 593 ASVVDMLCRSGRFNEAEKLMAEM---PIDPDEIMWSSVLNAC 631
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/471 (21%), Positives = 202/471 (42%), Gaps = 43/471 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ K L +E V N+ ++ T+A ++ A L + LG+++H ++
Sbjct: 219 NAMITGYSKDGL-DEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVI 277
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ +V + N +L+ Y K S+ DAR FD+MP+++ VS+ +I+G + + + A
Sbjct: 278 KTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFD 337
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ ++ + QF F +++ S +GRQ+HA I + S ++ N+L+ MY
Sbjct: 338 LFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYA 397
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + +A +F+ + + W +MI+A+ + G+ E L FN+M + ++ F
Sbjct: 398 KCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKM-RQASVIADQATFA 456
Query: 243 SVFSACSNFARI----------------------------------------LFNEIDSP 262
S+ A ++ A + F E+
Sbjct: 457 SLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDR 516
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM-QV 321
++ SWNA+I+ A + A + F EM L PD ++ +L AC + +G+
Sbjct: 517 NIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHF 576
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
+S D +++ M + A + E+ + D + W+S++ AC H
Sbjct: 577 NSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKN 636
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
E R ++ + D + ++ A E V+++H + G+
Sbjct: 637 QELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGV 687
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 31/128 (24%)
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS------- 469
L +V + I KTG D N + ++K G L AR+LF M + + VS
Sbjct: 33 LNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISG 92
Query: 470 ------------------------WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
W+ LI GY+Q EA +LF +M+ G P+ VT
Sbjct: 93 YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 152
Query: 506 VGVLTACS 513
V +L+ C+
Sbjct: 153 VTLLSGCN 160
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 180/568 (31%), Positives = 289/568 (50%), Gaps = 43/568 (7%)
Query: 53 LGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP-QRNVVSWTAMIAGC 111
G ++H + + D+ + N ++ MYG G +++ARM FD+ +RN VSW +++
Sbjct: 118 FGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAY 177
Query: 112 SQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL 171
+N + + A+K++ +M+ GV P +F F ++ AC+G + GR++HA VI++ + +
Sbjct: 178 VKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDV 237
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH 231
NAL+ MY+K I A VF + DV SW + I+ G++ AL +M
Sbjct: 238 FTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSS 297
Query: 232 GAYQPNEFIFGSVFSACS----------------------------------------NF 251
G PN F S+ AC+ +
Sbjct: 298 GLV-PNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDD 356
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
A+ +F+ I DL WNALI+G + + EA+SLF MR + T+ ++L +
Sbjct: 357 AKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTAS 416
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+ QVH+ K+GF S+ V N ++ Y KC L A VF++ G + D +++ S
Sbjct: 417 LEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHG-SYDIIAFTS 475
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+I A Q + E+ +LF ML + PD + ++ ACA +++ E Q+H ++ K
Sbjct: 476 MITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 535
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
DVF N L+ Y KCGS+ A F+ + VVSWS++I G AQ G G AL +F
Sbjct: 536 FMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFH 595
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
RM +SPN +T+ VL AC+H GLV+E + M+ +GI T EH +C++DLL RA
Sbjct: 596 RMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRA 655
Query: 552 GCVHEAEDFINQMACDADIVVWKSLLAS 579
G + +A + +N M + VW +LLA+
Sbjct: 656 GKLDDAMELVNSMPFQTNAAVWGALLAA 683
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 152/530 (28%), Positives = 248/530 (46%), Gaps = 48/530 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T L++ ++ +SL G +H H+L S V +NH+L+ Y KC AR FD++
Sbjct: 6 TIGPLLTRYAATQSLLQGAHIHAHLLKSGLF--AVFRNHLLSFYSKCRLPGSARRVFDEI 63
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P VSW++++ S N DA+ + M V +F ++K G G
Sbjct: 64 PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAG---FGT 120
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSKL 215
QLHA + + G + NAL+AMY F + +AR VF ++ SW +++A+ K
Sbjct: 121 QLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN 180
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------------- 249
A+ F EM+ G QPNEF F V +AC+
Sbjct: 181 DRCSHAVKVFGEMV-WGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFT 239
Query: 250 --------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A ++F ++ D+ SWNA I+G H + A+ L +M+ L
Sbjct: 240 ANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGL 299
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
+P+ T+ S+L AC G G Q+H +++K DS+ + ++ MYAK +L +A
Sbjct: 300 VPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKK 359
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF + + D V WN++I+ C Q E LF RM + T V+ + A +
Sbjct: 360 VFDWIPQR-DLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLE 418
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
++ Q+H K G D V+NGL+D Y KC L A ++F + D+++++S+I
Sbjct: 419 AISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMIT 478
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
+Q G++A+KLF M G+ P+ L +L AC+ + E+G ++
Sbjct: 479 ALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVH 528
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 141/482 (29%), Positives = 229/482 (47%), Gaps = 50/482 (10%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
++ +++AC+ R L+ GRKVH ++ + DV N +++MY K G + A + F K+P
Sbjct: 205 FSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVP 264
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+ +VVSW A I+GC + + A++L +QM SG++P FT SI+KAC+G G+ LGRQ
Sbjct: 265 ETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQ 324
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H ++K+ S L+ MY K + DA+ VF I ++D+ W ++I+ S
Sbjct: 325 IHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQ 384
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSA------------------------------ 247
EAL F M G + N +V +
Sbjct: 385 HAEALSLFCRMRKEG-FDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVN 443
Query: 248 ----------CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
C N+A +F + S D+ ++ ++I ++ + +A+ LF EM + L P
Sbjct: 444 GLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDP 503
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D + SLL AC QG QVH+++IK F S+V NA++ YAKC + +A L F
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAF 563
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
L + VSW+++I QH + +F RM+ I P+HIT V+ AC
Sbjct: 564 SGLPEKG-VVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAG-- 620
Query: 418 EMVTQLHCYITKTGLAFDVFVMNG----LMDIYIKCGSLGSARKLFNFME-NPDVVSWSS 472
+V + Y F + ++D+ + G L A +L N M + W +
Sbjct: 621 -LVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGA 679
Query: 473 LI 474
L+
Sbjct: 680 LL 681
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 175/343 (51%), Gaps = 17/343 (4%)
Query: 243 SVFSAC--SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
S +S C AR +F+EI P SW++L+ ++++ +A+ F MR + +
Sbjct: 45 SFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEF 104
Query: 301 TVHSLL-CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+ +L CA G Q+H+ + G ++ V NA++ MY + A +VF E
Sbjct: 105 VLPVVLKCAPDAGF----GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDE 160
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
G ++VSWN +++A +++++ ++F M+ ++P+ F+ V+ AC LE
Sbjct: 161 AGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEA 220
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
++H + +TG DVF N L+D+Y K G + A +F + DVVSW++ I G
Sbjct: 221 GRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVL 280
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTRE 539
G AL+L +M+S G+ PN+ TL +L AC+ G G ++ M +
Sbjct: 281 HGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANA--DSDN 338
Query: 540 HCS-CVVDLLARAGCVHEAE---DFINQMACDADIVVWKSLLA 578
+ + +VD+ A+ G + +A+ D+I Q D+V+W +L++
Sbjct: 339 YIAFGLVDMYAKHGLLDDAKKVFDWIPQR----DLVLWNALIS 377
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 185/398 (46%), Gaps = 43/398 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T + ++ AC+ + LGR++H ++ + D + +++MY K G L+DA+ FD +
Sbjct: 305 TLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWI 364
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
PQR++V W A+I+GCS Q +A+ L+ +M + G + T +++K+ + L ++ R
Sbjct: 365 PQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTR 424
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+HA K S N LI Y K D + A VF D+ ++ SMI A S+
Sbjct: 425 QVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCD 484
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+ +A+ F EML G P+ F+ S+ +AC++
Sbjct: 485 HGEDAIKLFMEMLRKG-LDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAG 543
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A + F+ + + SW+A+I G+A H + A+ +F M D +
Sbjct: 544 NALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHIS 603
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ +T+ S+LCAC + + + + + +M G + ++ + + L +A+
Sbjct: 604 PNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAME 663
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
+ + ++ W +++AA H EL RL + L
Sbjct: 664 LVNSMPFQTNAAVWGALLAASRVHRDP-ELGRLAAEKL 700
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P + L++AC+SL + + G++VH H++ + DV N ++ Y KCGS+EDA + F
Sbjct: 505 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFS 564
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+P++ VVSW+AMI G +Q+ A+ ++ +M+ + P T S++ AC+ G V
Sbjct: 565 GLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDE 624
Query: 155 GRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAA 211
++ + + +K G ++ +I + + ++ DA + + + + + WG+++AA
Sbjct: 625 AKR-YFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAA 683
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 6/177 (3%)
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
T ++ A SL +H ++ K+GL F VF N L+ Y KC GSAR++F+ +
Sbjct: 6 TIGPLLTRYAATQSLLQGAHIHAHLLKSGL-FAVF-RNHLLSFYSKCRLPGSARRVFDEI 63
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
+P VSWSSL+ Y+ +AL F MRS V N L VL G + L
Sbjct: 64 PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGFGTQ-L 122
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
H + G I + +V + G V EA ++ C+ + V W L+++
Sbjct: 123 HALAMATGLGGDIFV---ANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSA 176
>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
Length = 981
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 186/613 (30%), Positives = 307/613 (50%), Gaps = 44/613 (7%)
Query: 8 SLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQ 67
+L E L AY + + +A ++S C SL + G +V H+++S Q
Sbjct: 119 ALSSNGYLEETLRAYR-QMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQ 177
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
V + N ++ M+G G ++DA FD+M + + +S AMI+ S + ++ M
Sbjct: 178 NQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDM 237
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
G+ P T S++ C+ G +H+ ++S S + NAL+ MY+ ++
Sbjct: 238 RHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL 297
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
DA +F ++R+D+ SW +MI+++ + +AL ++ H PN F S A
Sbjct: 298 SDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEI-PNHLTFSSALGA 356
Query: 248 CSNF----------------------------------------ARILFNEIDSPDLASW 267
CS+ A +F + + D+ S+
Sbjct: 357 CSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSY 416
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYII 326
N LI G A + +AM +FS +R + P+ +T+ ++ + L+ G +H+YII
Sbjct: 417 NVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYII 476
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+ GF S+ V N+++TMYAKC L ++ +F + N + VSWN+IIAA Q EE
Sbjct: 477 RTGFLSDEYVANSLITMYAKCGNLESSTNIFNSI-TNKNIVSWNAIIAANAQLGHGEEAL 535
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
+LF M + K D + + + +CA +ASLE QLH K+GL D +V+N MD+Y
Sbjct: 536 KLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMY 595
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KCG + ++ W++LI GYA++G EA + F +M ++G P+ VT V
Sbjct: 596 GKCGKMNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFV 655
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
+L+ACSH GLV++G+ Y M + +G+ P +HC C+VDLL R G EAE FI +M
Sbjct: 656 ALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPV 715
Query: 567 DADIVVWKSLLAS 579
+ ++W+SLL+S
Sbjct: 716 LPNDLIWRSLLSS 728
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 154/531 (29%), Positives = 260/531 (48%), Gaps = 46/531 (8%)
Query: 39 AGLISACSSL---RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
A L++AC + G +H + +V + +L++YG G + DAR F +
Sbjct: 45 ASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWE 104
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP+RNVVSWTA++ S N + ++ Y QM + GV F +++ C L + G
Sbjct: 105 MPERNVVSWTALMVALSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPG 164
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
Q+ +HVI S + + N+LI M+ R+ DA +F + D S +MI+ +S
Sbjct: 165 LQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQ 224
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G + F++M HHG +P+ S+ S C++
Sbjct: 225 GICSKCFLVFSDMRHHG-LRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTV 283
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A LF + DL SWN +I+ + N+ +A+ ++
Sbjct: 284 INALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNE 343
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
+P+ LT S L AC L G VH+ ++++ N+ V N+++TMY KC+ + +A
Sbjct: 344 IPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEK 403
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF+ + + D VS+N +I + ++FS + ++ IKP++IT ++ G+
Sbjct: 404 VFQSMPTH-DVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSN 462
Query: 416 SLEMVTQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
L + LH YI +TG D +V N L+ +Y KCG+L S+ +FN + N ++VSW+++I
Sbjct: 463 DLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAII 522
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
AQ G G+EALKLF M+ G + V L L++C+ + +EEG+ L+
Sbjct: 523 AANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLH 573
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/531 (25%), Positives = 248/531 (46%), Gaps = 54/531 (10%)
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG---SV 152
MP R +W ++GC + ++ A +L M + GV F S++ AC G +
Sbjct: 1 MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGI 60
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G +HA ++ ++ AL+ +Y + DAR +F + ++V SW +++ A
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVAL 120
Query: 213 SKLGYELEALCHFNEMLHHGAYQP-NEFIFGSVFSAC----------------------- 248
S GY E L + +M G P N F +V S C
Sbjct: 121 SSNGYLEETLRAYRQMRREGV--PCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQN 178
Query: 249 ------------SNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
N R+ LF+ ++ D S NA+I+ + ++ +FS+MR
Sbjct: 179 QVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMR 238
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
L PD T+ SL+ C G +HS ++ DS+V V NA++ MY+ L
Sbjct: 239 HHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLS 298
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A +F + + D +SWN++I++ +Q+ + + + ++ + P+H+TF+ +GAC
Sbjct: 299 DAEFLFWNMSRR-DLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGAC 357
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ +L +H + + L ++ V N L+ +Y KC S+ A K+F M DVVS++
Sbjct: 358 SSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYN 417
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV---GVLTACSHVGLVEEGLHLYRIM 528
LI GYA G +A+++F+ +RS G+ PN +T++ G T+ + + LH Y I
Sbjct: 418 VLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYII- 476
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G + + ++ + A+ G + + + N + + +IV W +++A+
Sbjct: 477 --RTGFLSDEYVANSLITMYAKCGNLESSTNIFNSIT-NKNIVSWNAIIAA 524
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 191/592 (32%), Positives = 295/592 (49%), Gaps = 57/592 (9%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y L+ AC+SLR + + L+N +L Y + G AR D+MP
Sbjct: 14 YLHLLRACTSLRHAAAVHAHIARAHPA---ASLFLRNTLLAAYCRLGGPLPARRLLDEMP 70
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+RN VS+ +I S+ +++ + ++GV +F++ + + ACS G + GR
Sbjct: 71 RRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRA 130
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+HA I S + N+L++MY+K + +AR VF +D SW S+++ + + G
Sbjct: 131 VHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGA 190
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------- 251
E + F M+ G N F GSV CS
Sbjct: 191 REEMVRVF-AMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFL 249
Query: 252 ----------------ARILFNEIDSPDLASWNALIAG------VASHSNANEAMSLFSE 289
A LF + P++ +N +IAG V A+EA++L+SE
Sbjct: 250 VSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSE 309
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
++ R + P T S+L AC L G Q+H +IK F + + +A++ +Y
Sbjct: 310 VQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGC 369
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ + F+ K+ D V+W ++++ C+Q+ E+ LF L + +KPD T + VM
Sbjct: 370 MEDGFRCFRSSPKH-DIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMN 428
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVM--NGLMDIYIKCGSLGSARKLFNFMENPDV 467
ACA +A Q+ C+ TK+G FD F + N + +Y + G + +A + F ME+ DV
Sbjct: 429 ACASLAVARAGEQIQCFATKSG--FDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDV 486
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
VSWS++I +AQ GC +AL F M V PN +T +GVLTACSH GLV+EGL Y
Sbjct: 487 VSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYET 546
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M +YG+ PT +HC+CVVDLL RAG + +AE FI+ AD V+W+SLLAS
Sbjct: 547 MTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLAS 598
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 234/488 (47%), Gaps = 52/488 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+YA ++ACS L+ GR VH +L V + N +++MY KCG + +AR FD
Sbjct: 111 SYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVA 170
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL--GSVCL 154
+R+ VSW ++++G + + ++++ M + G+ F GS+IK CSG G++ +
Sbjct: 171 EERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDI 230
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
+H VIK+ S + +A+I MY K +++A +F + +V + +MIA F +
Sbjct: 231 AEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCR 290
Query: 215 ----LGYEL--EALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------NFARIL 255
+G E+ EAL ++E+ G QP EF F SV AC+ +
Sbjct: 291 TETVIGKEVASEALTLYSEVQSRG-MQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYT 349
Query: 256 FNEID-------------------------SP--DLASWNALIAGVASHSNANEAMSLFS 288
F E D SP D+ +W A+++G + +A+SLF
Sbjct: 350 FQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFH 409
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
E L PD T+ S++ AC G Q+ + K GFD + N+ + MYA+
Sbjct: 410 ESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSG 469
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ A F+E+ ++ D VSW+++I+ QH A + F M+ +++ P+ ITF V+
Sbjct: 470 DVDAATRRFQEM-ESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVL 528
Query: 409 GACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLF-NFMENPD 466
AC+ ++ + + +TK GL+ + ++D+ + G L A N + + D
Sbjct: 529 TACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHAD 588
Query: 467 VVSWSSLI 474
V W SL+
Sbjct: 589 PVIWRSLL 596
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 122/516 (23%), Positives = 218/516 (42%), Gaps = 96/516 (18%)
Query: 40 GLISACSSLR---SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
G + C S R ++ + VH ++ + DV L + +++MY K G+L +A F +
Sbjct: 214 GSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSV 273
Query: 97 PQRNVVSWTAMIAGCSQNYQ------ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ NVV + MIAG + ++A+ LY ++ G+ P +FTF S+++AC+ G
Sbjct: 274 QEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAG 333
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ G+Q+H VIK +ALI +Y + D F + D+ +W +M++
Sbjct: 334 YLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVS 393
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC------------------SNFA 252
+ +AL F+E L G +P+ F SV +AC S F
Sbjct: 394 GCVQNELHEKALSLFHESLGAG-LKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFD 452
Query: 253 RIL----------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
R F E++S D+ SW+A+I+ A H A +A+ F EM
Sbjct: 453 RFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEM 512
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSV 349
D +++P+ +T +L AC + +G++ + + K G + C ++ + +
Sbjct: 513 VDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGR 572
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L +A +AD V W S++A+C H E + +R++ +++P
Sbjct: 573 LADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIM--ELEP---------- 620
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV-- 467
T Y+ L ++Y+ G L A K + M+ V
Sbjct: 621 -----------TSSASYVI-------------LYNMYLDAGELSLASKTRDLMKQRGVKK 656
Query: 468 ---VSWSSLILGYAQFGCGD----EALKLFTRMRSL 496
+SW L G F GD E+ ++T++ +
Sbjct: 657 EPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEM 692
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 129/256 (50%), Gaps = 12/256 (4%)
Query: 3 NDYVSSLCK------QNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLG 54
N ++ C+ + + +EAL Y Q+ ++P+ T++ ++ AC+ L+ G
Sbjct: 282 NTMIAGFCRTETVIGKEVASEALTLYSEVQSRG---MQPTEFTFSSVLRACNLAGYLEFG 338
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
+++H ++ Q D + + ++++Y G +ED F P+ ++V+WTAM++GC QN
Sbjct: 339 KQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQN 398
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
A+ L+ + L +G+ P FT S++ AC+ L G Q+ KS +
Sbjct: 399 ELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMG 458
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
N+ + MY + + A F + DV SW ++I+ ++ G +AL F+EM+
Sbjct: 459 NSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMV-DAKV 517
Query: 235 QPNEFIFGSVFSACSN 250
PNE F V +ACS+
Sbjct: 518 VPNEITFLGVLTACSH 533
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Query: 8 SLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQ 67
S C QN +E ++ ++ T + +++AC+SL + G ++ S
Sbjct: 393 SGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFD 452
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
V+ N ++MY + G ++ A F +M +VVSW+A+I+ +Q+ DA+ + +M
Sbjct: 453 RFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEM 512
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ-NALIAMYTKFDR 186
+ + V+P + TF ++ ACS G V G + + + K S I ++ + + R
Sbjct: 513 VDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGR 572
Query: 187 ILDARNVFS-GIARKDVTSWGSMIAA 211
+ DA S I D W S++A+
Sbjct: 573 LADAEAFISNSIFHADPVIWRSLLAS 598
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 183/619 (29%), Positives = 312/619 (50%), Gaps = 58/619 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +SS + LY+E L + + T++ T+ +I AC+ + + +G VH ++
Sbjct: 155 NAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVV 214
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D+ + N +++ YG G + DA FD MP+RN+VSW +MI S N +
Sbjct: 215 KTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGDD----- 269
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
MP T +++ C+ + +G+ +H +K L+ NAL+ MY+
Sbjct: 270 -------GAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYS 322
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG-------------------------- 216
K+ I+D++ +F K+V SW +M+ FS G
Sbjct: 323 KWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTI 382
Query: 217 -------YELEALCHFNEMLHHGAYQPNEFIFGSV--------FSACSN--FARILFNEI 259
++ L E+ H EF++ + ++ C + +A+ +F+ I
Sbjct: 383 LNAVPVCFDESVLPSLKEL--HCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGI 440
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
S L SWNALI G A S+ ++ +M++ LLPD TV SLL AC +L G
Sbjct: 441 RSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGK 500
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+VH +II+ + ++ V ++L++Y C LC ++F + N+ VSWN++I LQ+
Sbjct: 501 EVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNS-LVSWNTVITGHLQN 559
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
E LF +M+ I+P I+ V GAC+ + SL + + H Y K L + F+
Sbjct: 560 GFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIA 619
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
++D+Y K G++ + K+FN ++ SW+++I+GY G EA+KLF M+ G +
Sbjct: 620 CSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRN 679
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
P+ +T +GVLTAC+H GL+ EGL M++ +G+ P +H +CV+D+L RAG + A
Sbjct: 680 PDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALR 739
Query: 560 FINQMACDADIVVWKSLLA 578
+M+ + D+ +W SLL+
Sbjct: 740 VAAEMSEEPDVGIWNSLLS 758
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 147/574 (25%), Positives = 273/574 (47%), Gaps = 71/574 (12%)
Query: 41 LISACSSLRSLQLGRKVHDHILL--SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
L+ A + +++GRK+H H++ ++ + D VL I+ MY CGS +D+R FD +
Sbjct: 90 LLQASGKRKDIEMGRKIH-HLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRS 148
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+N+ W A+I+ S+N ++ ++++I+M+ ++ ++P FTF +IKAC+G+ V +G
Sbjct: 149 KNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLA 208
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H V+K+ L NAL++ Y + DA +F + +++ SW SMI FS G
Sbjct: 209 VHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGD 268
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------------------- 254
+ GA+ P+ +V C+ I
Sbjct: 269 D-------------GAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNN 315
Query: 255 -----------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM--RDREL 295
+F ++ ++ SWN ++ G ++ + + L +M ++
Sbjct: 316 ALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDV 375
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
D +T+ + + C L ++H Y +K F + + NA + YAKC L A
Sbjct: 376 KADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQR 435
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF + ++ SWN++I Q + +M S + PD+ T ++ AC+K+
Sbjct: 436 VFHGI-RSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLK 494
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
SL + ++H +I + L D+FV ++ +YI CG L + + LF+ ME+ +VSW+++I
Sbjct: 495 SLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVIT 554
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS-----HVGLVEEGLHLYRIMEN 530
G+ Q G + AL LF +M G+ P ++++ V ACS +G L ++E+
Sbjct: 555 GHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLED 614
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
I CS ++D+ A+ G + ++ N +
Sbjct: 615 NAFIA-----CS-IIDMYAKNGAITQSSKVFNGL 642
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 191/408 (46%), Gaps = 32/408 (7%)
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGI 197
G +++A + +GR++H V S S + +I MY D+R+ F +
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDAL 146
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--- 254
K++ W ++I+++S+ E L F +M+ P+ F F V AC+ + +
Sbjct: 147 RSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIG 206
Query: 255 ------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL------------- 295
+ DL NAL++ +H ++A+ LF M +R L
Sbjct: 207 LAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDN 266
Query: 296 ------LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
+PD TV ++L C + G VH + +K+ D + V NA++ MY+K
Sbjct: 267 GDDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGC 326
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA--SQIKPDHITFNDV 407
+ ++ ++FK L N + VSWN+++ F L +MLA +K D +T +
Sbjct: 327 IIDSQMIFK-LNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNA 385
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
+ C + L + +LHCY K +D + N + Y KCGSL A+++F+ + + +
Sbjct: 386 VPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTL 445
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
SW++LI GYAQ +L +M++ G+ P+ T+ +L+ACS +
Sbjct: 446 NSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKL 493
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/474 (24%), Positives = 205/474 (43%), Gaps = 63/474 (13%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
+++H + L + D +L N + Y KCGSL A+ F + + + SW A+I G +Q+
Sbjct: 399 KELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQS 458
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
++ ++QM SG++P FT S++ ACS L S+ LG+++H +I++ L
Sbjct: 459 SDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 518
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
+++++Y + + +F + + SW ++I + G+ AL F +M+ +G
Sbjct: 519 LSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYG-I 577
Query: 235 QPNEFIFGSVFSACSNFARI---------------------------------------- 254
QP +VF ACS +
Sbjct: 578 QPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSK 637
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+FN + ASWNA+I G H A EA+ LF EM+ PD LT +L AC
Sbjct: 638 VFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGL 697
Query: 315 LYQGMQVHSYIIKM----GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
L++G++ Y+ +M G N+ ++ M + L NAL V E+ + D WN
Sbjct: 698 LHEGLR---YLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWN 754
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQI-KPDHIT-----------FNDVMGACAKMASLE 418
S+++ C H E ++ +++ + KP++ ++DV +M +
Sbjct: 755 SLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMS 814
Query: 419 MVTQLHC-YITKTGLAFDVFVMNGLMDIYIKCGSLGS--ARKLFNFMENPDVVS 469
+ C +I G F V +D + + SL S K++ PD S
Sbjct: 815 LRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPDTSS 868
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 149/300 (49%), Gaps = 24/300 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T L+SACS L+SL+LG++VH I+ + + D+ + +L++Y CG L ++ FD M
Sbjct: 482 TVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAM 541
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++VSW +I G QN A+ L+ QM+ G+ P + ++ ACS L S+ LGR
Sbjct: 542 EDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGR 601
Query: 157 QLHAHVIKSEHGSHLIAQNALIA-----MYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ HA+ +K HL+ NA IA MY K I + VF+G+ K SW +MI
Sbjct: 602 EAHAYALK-----HLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMG 656
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS----- 261
+ G EA+ F EM G P++ F V +AC++ + +++ S
Sbjct: 657 YGMHGRAKEAIKLFEEMQRTGR-NPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLK 715
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
P+L + +I + + A+ + +EM + PD +SLL C L G +V
Sbjct: 716 PNLKHYACVIDMLGRAGQLDNALRVAAEMSEE---PDVGIWNSLLSWCRIHQNLEMGEKV 772
>gi|359480813|ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Vitis vinifera]
Length = 634
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 183/548 (33%), Positives = 288/548 (52%), Gaps = 16/548 (2%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+ CS+ ++L G+++H HI+L + ++ MY CG L A+ FDK+ Q N
Sbjct: 29 LLQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFDKLSQPN 88
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
V +WTA++ S+N ++ ++ Y +M GV+P ++ F + +AC L + +G Q+H
Sbjct: 89 VFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQLLWLEVGIQVHK 148
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
V+ L N+LI MY+K + R VF + +DV SW SMI+ + G+ LE
Sbjct: 149 DVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVCNGF-LE 207
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-----ARILFNEIDSPDLASWNALIAGVA 275
+ ++P+ + +V A A +F +I P++ S L++G +
Sbjct: 208 FSVELLASMRIRGFEPDMVTWNTVMDAYCRMGLCDEAWEIFEQIKEPNIISLTTLVSGYS 267
Query: 276 SHSNANEAMSLFSEMRDREL-LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
N +++ +F EM R + PD ++ S+L +C L G ++H Y I+ DS+
Sbjct: 268 RIGNHEKSLGIFREMMSRRVAFPDLDSLSSVLVSCRHLGALVCGQEIHGYGIR-SVDSSS 326
Query: 335 ---PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
A+LTMY KC + +AL VF EL D V+WN++I + FS+
Sbjct: 327 FYKSAGAALLTMYVKCKRIQDALNVF-ELMDRFDVVTWNAMILGFVDLEMGHLALECFSK 385
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M S I + IT + V+ AC L+ Q+H YITK + + V N L+ +Y KCG
Sbjct: 386 MQRSGIMNNQITISTVLPAC----DLKSGKQVHAYITKNSFSSVIPVWNALIHMYSKCGC 441
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+G+A +F+ M + D+VSW+++I G+ G G AL+L M V PN VT L+A
Sbjct: 442 IGTAYSIFSNMISRDLVSWNTMIGGFGMHGLGQFALQLLRDMSHSDVCPNSVTFTSALSA 501
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
CSH GLV+EG+ L+ M ++G P EH SCVVDLLARA + +A FI +M
Sbjct: 502 CSHSGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDLLARADRLEDAVGFIEKMPLKPSKH 561
Query: 572 VWKSLLAS 579
+W +LLA+
Sbjct: 562 IWSALLAA 569
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/461 (21%), Positives = 216/461 (46%), Gaps = 38/461 (8%)
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG 196
F +++ CS ++ G+QLH H+I H L+ MY + A+ +F
Sbjct: 24 FQLNHLLQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFDK 83
Query: 197 IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILF 256
+++ +V +W +++ +S+ G E + ++EM G P++++F VF AC ++L+
Sbjct: 84 LSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVL-PDKYVFPKVFRAC---GQLLW 139
Query: 257 NEID------------SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
E+ DL N+LI + + +F EM +R++L +
Sbjct: 140 LEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISG 199
Query: 305 LLCACIGRLT--LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
+C + L M++ GF+ ++ N ++ Y + + A +F+++ K
Sbjct: 200 YVCNGFLEFSVELLASMRIR------GFEPDMVTWNTVMDAYCRMGLCDEAWEIFEQI-K 252
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK-PDHITFNDVMGACAKMASLEMVT 421
+ +S ++++ + E+ +F M++ ++ PD + + V+ +C + +L
Sbjct: 253 EPNIISLTTLVSGYSRIGNHEKSLGIFREMMSRRVAFPDLDSLSSVLVSCRHLGALVCGQ 312
Query: 422 QLHCYITKTGLAFDVFVMNG--LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
++H Y ++ + + G L+ +Y+KC + A +F M+ DVV+W+++ILG+
Sbjct: 313 EIHGYGIRSVDSSSFYKSAGAALLTMYVKCKRIQDALNVFELMDRFDVVTWNAMILGFVD 372
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPT 537
G AL+ F++M+ G+ N +T+ VL AC ++ G +H Y + +IP
Sbjct: 373 LEMGHLALECFSKMQRSGIMNNQITISTVLPACD----LKSGKQVHAYITKNSFSSVIPV 428
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++ + ++ GC+ A + M D+V W +++
Sbjct: 429 ---WNALIHMYSKCGCIGTAYSIFSNMI-SRDLVSWNTMIG 465
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 177/382 (46%), Gaps = 57/382 (14%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
+PD+V N +++ Y + G ++A F+++ + N++S T +++G S+ ++ ++ +
Sbjct: 222 EPDMVTWNTVMDAYCRMGLCDEAWEIFEQIKEPNIISLTTLVSGYSRIGNHEKSLGIFRE 281
Query: 127 MLQSGV-MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI--AQNALIAMYTK 183
M+ V P + S++ +C LG++ G+++H + I+S S A AL+ MY K
Sbjct: 282 MMSRRVAFPDLDSLSSVLVSCRHLGALVCGQEIHGYGIRSVDSSSFYKSAGAALLTMYVK 341
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
RI DA NVF + R DV +W +MI F L AL F++M G N+ +
Sbjct: 342 CKRIQDALNVFELMDRFDVVTWNAMILGFVDLEMGHLALECFSKMQRSGIMN-NQITIST 400
Query: 244 VFSAC--------------SNFARIL----------------------FNEIDSPDLASW 267
V AC ++F+ ++ F+ + S DL SW
Sbjct: 401 VLPACDLKSGKQVHAYITKNSFSSVIPVWNALIHMYSKCGCIGTAYSIFSNMISRDLVSW 460
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV-HSYII 326
N +I G H A+ L +M ++ P+ +T S L AC + +GM++ H+
Sbjct: 461 NTMIGGFGMHGLGQFALQLLRDMSHSDVCPNSVTFTSALSACSHSGLVDEGMELFHTMTR 520
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC-LQHN----- 380
GF + + ++ + A+ L +A+ +++ W++++AAC Q N
Sbjct: 521 DFGFTPGMEHFSCVVDLLARADRLEDAVGFIEKMPLKPSKHIWSALLAACRAQQNVSVAK 580
Query: 381 -QAEELFRLFSRMLASQIKPDH 401
AE+LF Q++P+H
Sbjct: 581 LAAEQLF---------QLEPEH 593
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 201/655 (30%), Positives = 322/655 (49%), Gaps = 113/655 (17%)
Query: 34 RPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
+ T++ + CS ++L G++ H ++L++ +P V + N ++ MY KC L A F
Sbjct: 41 KKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVF 100
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLY---------------IQMLQSGVMPGQFT 138
D MPQR+ VSW AM+ G + A KL+ +M + G + + T
Sbjct: 101 DGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTT 160
Query: 139 FGSIIKACSGL------------------------GSVCL---------------GRQL- 158
F ++K+CS L GS L G +L
Sbjct: 161 FAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELF 220
Query: 159 -------------HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN-VFSGIARKDVTS 204
H H +K++ G+ ++ A + MY K + + D N +F+ + ++ S
Sbjct: 221 KEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQS 280
Query: 205 WGSMIAAFSKLGYELEALCHF----------NEMLHHGAYQPNEFIFG----------SV 244
+ ++I +++ +EAL F +E+ GA + I G S+
Sbjct: 281 YNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSM 340
Query: 245 FSAC-SNF------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
S C SN A ++F E+ S D SWNA+IA + N + +S
Sbjct: 341 KSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLS 400
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK--MGFDSNVPVCNAILTM 343
LF M + PD T S+L AC G L GM++H+ IIK MG DS V + A++ M
Sbjct: 401 LFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGI--ALIDM 458
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
Y+KC ++ A + L + VSWN+II+ Q+EE + FS+ML + PD+ T
Sbjct: 459 YSKCGMMEKAEKLHDRLAEQT-VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFT 517
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
+ ++ CA + ++E+ Q+H I K L D ++ + L+D+Y KCG++ + +F
Sbjct: 518 YATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP 577
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
N D V+W++++ GYAQ G G+EALK+F M+ V PN T + VL AC H+GLVE+GLH
Sbjct: 578 NRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLH 637
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ M + YG+ P EH SCVVD++ R+G V +A + I M +AD V+W++LL+
Sbjct: 638 YFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 692
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 205/437 (46%), Gaps = 56/437 (12%)
Query: 2 SNDYVSSLCKQNL--YNEALVAYDFSQN------------NTNIRIRPSTYAGLISACSS 47
SN +SL NL YN +V Y S + + + + +G AC+
Sbjct: 266 SNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAV 325
Query: 48 LRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAM 107
++ G +VH + S CQ ++ + N IL+MYGKCG+L +A + F++M R+ VSW A+
Sbjct: 326 IKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAI 385
Query: 108 IAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
IA QN E + L++ MLQSG+ P +FT+GS++KAC+G ++ G ++H +IKS
Sbjct: 386 IAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRM 445
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
G ALI MY+K + A + +A + V SW ++I+ FS EA F++
Sbjct: 446 GLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSK 505
Query: 228 MLHHGAYQPNEFIFGSVFSACSNFA----------------------------------- 252
ML G P+ F + ++ C+N
Sbjct: 506 MLEMGV-DPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCG 564
Query: 253 -----RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC 307
+++F + + D +WNA++ G A H EA+ +F M+ + P+ T ++L
Sbjct: 565 NMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLR 624
Query: 308 ACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
AC + +G+ HS + G D + + ++ + + + AL + + + AD+
Sbjct: 625 ACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADA 684
Query: 367 VSWNSIIAACLQHNQAE 383
V W ++++ C H E
Sbjct: 685 VIWRTLLSXCKIHGNVE 701
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 137/549 (24%), Positives = 240/549 (43%), Gaps = 98/549 (17%)
Query: 22 YDFSQNNTNIRIRPSTYAGLISACSSLRS------------------------------- 50
+DF +T+A ++ +CSSL
Sbjct: 145 FDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYA 204
Query: 51 ------------LQLGRK----------VHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
L+L ++ +H H L + DVV+ L+MY KC +L D
Sbjct: 205 KCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSD 264
Query: 89 -ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
+ F+ +P N+ S+ A+I G +++ + +A+ ++ + +SG+ + + +AC+
Sbjct: 265 CSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACA 324
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
+ G Q+H +KS S++ NA++ MY K +++A VF + +D SW +
Sbjct: 325 VIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNA 384
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------- 251
+IAA + G E + L F ML G +P+EF +GSV AC+ +
Sbjct: 385 IIAAHEQNGNEEKTLSLFVWMLQSG-MEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKS 443
Query: 252 ------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
A L + + + SWNA+I+G + + EA F
Sbjct: 444 RMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTF 503
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
S+M + + PD T ++L C +T+ G Q+H+ IIK S+ + + ++ MY+KC
Sbjct: 504 SKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKC 563
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
+ + L+F E N D V+WN+++ QH EE ++F M +KP+H TF V
Sbjct: 564 GNMQDFQLIF-EKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAV 622
Query: 408 MGACAKMASLEM-VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NP 465
+ AC M +E + H ++ GL + + ++DI + G + A +L M
Sbjct: 623 LRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEA 682
Query: 466 DVVSWSSLI 474
D V W +L+
Sbjct: 683 DAVIWRTLL 691
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 284/529 (53%), Gaps = 42/529 (7%)
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
M FD+MP+RN VS+ +I G +Q+ + +A +L+ ++ G F F +++K +
Sbjct: 1 MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
LGR +H V+K +GS+ ALI Y+ + AR VF I+ KD+ SW MIA
Sbjct: 61 WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC------------------SNFA 252
++++ EAL F++M G ++PN F F V AC +N+
Sbjct: 121 SYAENDCFSEALEFFSQMRVAG-FKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYE 179
Query: 253 RIL----------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
R L F ++ D+ W+ +I+ A + +A+ +F +M
Sbjct: 180 RDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQM 239
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
R ++P+ T S+L A +L +H + +K G ++V V NA++ YAKC +
Sbjct: 240 RRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCI 299
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
++ +F+ L D VSWN+II + +Q E LFS ML Q++ +T++ ++ A
Sbjct: 300 EQSMELFEALSDRND-VSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRA 358
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
CA +A+LE+ Q+HC KT DV V N L+D+Y KCGS+ AR +F+ ++ D VSW
Sbjct: 359 CATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSW 418
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
+++I GY+ G G EA+K+F M+ P+ +T VGVL+ACS+ G ++EG + M+
Sbjct: 419 NAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQ 478
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+YGI P EH +C+V L+ R+G + +A FI + + +++W++LL +
Sbjct: 479 DYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGA 527
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 216/488 (44%), Gaps = 50/488 (10%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+ P + ++ S+ +LGR VH +L + + +++ Y G + AR
Sbjct: 43 ELNPFVFTTVLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMARE 102
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD++ +++VSWT MIA ++N ++A++ + QM +G P FTF ++KAC GL +
Sbjct: 103 VFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQN 162
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
G+ +H V+K+ + L L+ +YT+ DA F + + DV W MI+
Sbjct: 163 FDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISR 222
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------------- 254
F++ G +AL F +M PN+F F SV A ++ +
Sbjct: 223 FAQSGQSEKALEIFCQM-RRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLST 281
Query: 255 -----------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
LF + + SWN +I + A+SLFS M
Sbjct: 282 DVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNML 341
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
++ +T S+L AC L G+QVH K + +V V NA++ MYAKC +
Sbjct: 342 RYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIK 401
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A +F L D VSWN+II H E ++F+ M ++ KPD +TF V+ AC
Sbjct: 402 DARFMFDMLDLR-DKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSAC 460
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVF-VMNGLMDIYIKCGSLGSARKLFNFMEN----PD 466
+ L+ Q Y T + + M + G G+ + F+E+ P
Sbjct: 461 SNTGRLDEGKQ---YFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPS 517
Query: 467 VVSWSSLI 474
V+ W +L+
Sbjct: 518 VMIWRALL 525
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 203/424 (47%), Gaps = 53/424 (12%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILL 63
++S + + ++EAL +F +P+ T+AG++ AC L++ G+ VH +L
Sbjct: 119 IASYAENDCFSEAL---EFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLK 175
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
+ + D+ + +L +Y +CG +DA F MP+ +V+ W+ MI+ +Q+ Q A+++
Sbjct: 176 TNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEI 235
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ QM ++ V+P QFTF S+++A + + S+ L + +H H +K+ + + NAL+A Y K
Sbjct: 236 FCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAK 295
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
I + +F ++ ++ SW ++I ++ +LG AL F+ ML + Q E + S
Sbjct: 296 CGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQV-QATEVTYSS 354
Query: 244 VFSACSNF----------------------------------------ARILFNEIDSPD 263
+ AC+ AR +F+ +D D
Sbjct: 355 ILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRD 414
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
SWNA+I G + H EA+ +F+ M++ + PD LT +L AC L +G Q
Sbjct: 415 KVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQ--- 471
Query: 324 YIIKMGFDSNVPVC----NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
Y M D + C ++ + + L A+ +++ + W +++ AC+ H
Sbjct: 472 YFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIH 531
Query: 380 NQAE 383
N E
Sbjct: 532 NDVE 535
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 171/541 (31%), Positives = 285/541 (52%), Gaps = 37/541 (6%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNM--YGKCGSLEDARMGFDKMPQ 98
L+S C S+R+ +++H HI+ + + + ++ + G + A F+ + +
Sbjct: 35 LLSKCQSIRTF---KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEE 91
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
N+ W +MI G S + A+ +++M+ SGV P +TF ++K+C+ L S G+Q+
Sbjct: 92 PNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQI 151
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
HAHV+K S + +LI MY + + +A+ VF +D S+ ++IA ++ GY
Sbjct: 152 HAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGY- 210
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHS 278
+ AR LF+E+ D+ SWNA+IAG A
Sbjct: 211 ------------------------------MDRARQLFDEMPVKDVVSWNAMIAGYAQMG 240
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
+ EA+ LF +MR + P+ T+ S+L AC L G + S+I G SN+ + N
Sbjct: 241 RSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVN 300
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
A++ MY+KC L A +F ++ + D +SWN +I +E LF MLAS ++
Sbjct: 301 ALIDMYSKCGDLQTARELFDDMLER-DVISWNVMIGGYTHMCSYKEALALFREMLASGVE 359
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
P ITF ++ +CA + ++++ +H YI K + + L+D+Y KCG++ +AR++
Sbjct: 360 PTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQV 419
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
F+ M+ + SW+++I G A G D+A +LF++M S G+ PN +T VG+L+AC H GLV
Sbjct: 420 FDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLV 479
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ G + M +Y I P +H C++DLL RAG EAE + M D +W SLL
Sbjct: 480 DLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLG 539
Query: 579 S 579
+
Sbjct: 540 A 540
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 196/443 (44%), Gaps = 87/443 (19%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L+ +C+ L S G+++H H+L DV + ++NMY + G + +A++ FD+
Sbjct: 131 TFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQS 190
Query: 97 PQRNVVSWT-------------------------------AMIAGCSQNYQENDAIKLYI 125
R+ +S+T AMIAG +Q + +A+ L+
Sbjct: 191 NFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFE 250
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M ++ V P + T S++ AC+ ++ LG + + + S+L NALI MY+K
Sbjct: 251 DMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCG 310
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ AR +F + +DV SW MI ++ + EAL F EML G +P E F S+
Sbjct: 311 DLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGV-EPTEITFLSIL 369
Query: 246 SACS-----------------NF-----------------------ARILFNEIDSPDLA 265
+C+ NF AR +F+ + LA
Sbjct: 370 PSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLA 429
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SWNA+I G+A H A++A LFS+M + P+ +T +L AC + G Q S +
Sbjct: 430 SWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSM 489
Query: 326 I---KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ K+ S C ++ + + + A + + + D W S++ AC H +
Sbjct: 490 VQDYKISPKSQHYGC--MIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRV 547
Query: 383 E--ELF--RLFSRMLASQIKPDH 401
E EL RLF +++PD+
Sbjct: 548 ELGELVAERLF------ELEPDN 564
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/489 (33%), Positives = 265/489 (54%), Gaps = 34/489 (6%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F+ + + N++ W M G + + AIKLY+ M+ G++P +TF ++K+C+ L
Sbjct: 60 FETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVS 119
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+Q+H HV+K + L +LI+MY K R DA VF G + +DV S+ ++I +
Sbjct: 120 KEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGY 179
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
+ GY +E+ A+ +F+EI D+ SWNA+I+
Sbjct: 180 ASRGY-IES------------------------------AQKMFDEIPVKDVVSWNAIIS 208
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A N EA+ LF EM + PD T+ +++ AC ++ G QVHS+I G S
Sbjct: 209 GYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGS 268
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N+ + NA++ +Y+KC + A +F+ L N D +SWN++I N +E LF M
Sbjct: 269 NLKIVNALIDLYSKCGEVETACGLFQGLS-NKDVISWNTMIGGYTHLNLYKEALLLFQEM 327
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFDVFVMNGLMDIYIKCG 450
L S P+ +T ++ ACA++ +++ +H YI K G+ + L+D+Y KCG
Sbjct: 328 LRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCG 387
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ +A ++FN M + + + +++I G+A G + A +F+RMR G+ P+ +T VG+L+
Sbjct: 388 DIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLS 447
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSH G+++ G ++R M Y I P EH C++DLL G EAE+ IN M + D
Sbjct: 448 ACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDG 507
Query: 571 VVWKSLLAS 579
V+W SLL +
Sbjct: 508 VIWCSLLKA 516
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 174/358 (48%), Gaps = 39/358 (10%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+A +F I P+L WN + G A S+ A+ L+ M LLP+ T LL +C
Sbjct: 55 YAISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCA 114
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN------- 363
+G Q+H +++K+G++ ++ V ++++MY K +A VF
Sbjct: 115 KLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTA 174
Query: 364 -----------------------ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
D VSWN+II+ +E LF M+ + +KPD
Sbjct: 175 LITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPD 234
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T V+ ACA+ S+++ Q+H +I GL ++ ++N L+D+Y KCG + +A LF
Sbjct: 235 ESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQ 294
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
+ N DV+SW+++I GY EAL LF M G +PN VT++ +L AC+ +G ++
Sbjct: 295 GLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDF 354
Query: 521 G--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM------ACDADI 570
G +H+Y I + G+ + ++D+ A+ G + A N M AC+A I
Sbjct: 355 GRWIHVY-IDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMI 411
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 195/445 (43%), Gaps = 89/445 (20%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS----------- 85
T+ L+ +C+ L+ + G+++H H+L + D+ + +++MY K G
Sbjct: 105 TFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGS 164
Query: 86 --------------------LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+E A+ FD++P ++VVSW A+I+G + +A+ L+
Sbjct: 165 SHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFK 224
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M+++ V P + T +++ AC+ GS+ LGRQ+H+ + GS+L NALI +Y+K
Sbjct: 225 EMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCG 284
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A +F G++ KDV SW +MI ++ L EAL F EML G PN+ S+
Sbjct: 285 EVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGE-NPNDVTMLSIL 343
Query: 246 SACSNFARI------------------------------------------LFNEIDSPD 263
AC+ I +FN +
Sbjct: 344 PACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRT 403
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
L++ NA+I G A H AN A +FS MR + PD +T LL AC + GM
Sbjct: 404 LSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACS-----HSGMLDLG 458
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE-------LGKNADSVSWNSIIAAC 376
I N + L Y L L +FKE + D V W S++ AC
Sbjct: 459 RRIFRSMTQNYKITPK-LEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKAC 517
Query: 377 LQHNQAEELFRLFSRMLASQIKPDH 401
H EL F++ L +I+P++
Sbjct: 518 KMHGNV-ELGESFAQKLI-KIEPEN 540
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 147/293 (50%), Gaps = 16/293 (5%)
Query: 29 TNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
TN++ ST ++SAC+ S+QLGR+VH I ++ + N ++++Y KCG +E
Sbjct: 229 TNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVET 288
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A F + ++V+SW MI G + +A+ L+ +ML+SG P T SI+ AC+
Sbjct: 289 ACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQ 348
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIA--QNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
LG++ GR +H ++ K G + + +LI MY K I A VF+ + + +++
Sbjct: 349 LGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACN 408
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFNEID- 260
+MI F+ G A F+ M +G +P++ F + SACS + R +F +
Sbjct: 409 AMIFGFAMHGRANAAFDIFSRMRKNGI-EPDDITFVGLLSACSHSGMLDLGRRIFRSMTQ 467
Query: 261 ----SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+P L + +I + EA + + M + PDG+ SLL AC
Sbjct: 468 NYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTM---TMEPDGVIWCSLLKAC 517
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 187/576 (32%), Positives = 278/576 (48%), Gaps = 69/576 (11%)
Query: 69 DVVLQNHILNMYGKCGSLE--DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
DV N +L Y C SL+ DAR F+KMP+RN+VSWT MI+G + A ++ +
Sbjct: 157 DVSSWNSMLTGY--CHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCK 214
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M + G++P Q F S + A GLG++ + L +K+ ++ A++ +Y++
Sbjct: 215 MHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTS 274
Query: 187 ILD-ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+LD A F + ++ +W +MIAA S G A+ + I G
Sbjct: 275 VLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQ 334
Query: 246 SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE----------- 294
+ ARILF +I P + SWNALI G + NEA LF +M R
Sbjct: 335 CGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGY 394
Query: 295 --------------------LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+LP ++ S+ AC + L G QVHS +K+G N
Sbjct: 395 AQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNS 454
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN-------------- 380
CNA++TMY KC + A VF + D VSWNS +AA +Q++
Sbjct: 455 FACNALITMYGKCRNMEYARQVFSRM-VTKDIVSWNSFLAALVQNDLLDEARNTFDNMLS 513
Query: 381 -----------------QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
Q+ E F M P+ ++G C + + ++ Q+
Sbjct: 514 RDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQI 573
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H K G+ ++ V N L+ +Y KCG S R++F+ ME D+ +W+++I GYAQ G G
Sbjct: 574 HTVAIKLGMDSELIVANALISMYFKCGCADS-RRIFDLMEERDIFTWNTIITGYAQHGLG 632
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
EA+K++ M S GV PN VT VG+L ACSH GLV+EG ++ M +YG+ P EH +C
Sbjct: 633 REAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYAC 692
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+VDLL R G V AE FI M + D V+W +LL +
Sbjct: 693 MVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGA 728
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 208/426 (48%), Gaps = 36/426 (8%)
Query: 52 QLGRKVHDHILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
Q GR IL + +P VV N ++ Y + G + +A+ FDKMP RN +SW MIAG
Sbjct: 334 QCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAG 393
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
+QN + +A+ L ++ +SG++P + SI ACS + ++ G Q+H+ +K +
Sbjct: 394 YAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFN 453
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
A NALI MY K + AR VFS + KD+ SW S +AA + N++L
Sbjct: 454 SFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQ-----------NDLLD 502
Query: 231 HGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
AR F+ + S D SW +I+ A +NEAM F M
Sbjct: 503 E--------------------ARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTM 542
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
LP+ + LL C G Q+H+ IK+G DS + V NA+++MY KC
Sbjct: 543 FCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC- 601
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
++ +F +L + D +WN+II QH E +++ M ++ + P+ +TF ++ A
Sbjct: 602 ADSRRIF-DLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNA 660
Query: 411 CAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSL-GSARKLFNFMENPDVV 468
C+ ++ + +++ GL ++D+ + G + G+ + +++ PD V
Sbjct: 661 CSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTV 720
Query: 469 SWSSLI 474
WS+L+
Sbjct: 721 IWSALL 726
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 236/529 (44%), Gaps = 64/529 (12%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
R H + +S C + G+ G + +AR FD MP+R++++W +MI+ N
Sbjct: 26 RHAHGELEVSGCSARI-------RDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHN 78
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA-HVIKSEHGSHLIA 173
+ A LY + G G+I+ SG G LGR L A V + +A
Sbjct: 79 GMPDAARDLY-----DAISGGNMRTGAIL--LSGYGR--LGRVLEARRVFDGMLERNTVA 129
Query: 174 QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA 233
NA+I+ Y + I AR +F + +DV+SW SM+ + CH +M+
Sbjct: 130 WNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGY----------CHSLQMVD--- 176
Query: 234 YQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
AR LF ++ +L SW +I+G N +A +F +M
Sbjct: 177 ------------------ARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHRE 218
Query: 294 ELLPDGLTVHSLLCAC--IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
LLPD S L A +G L + + ++V + +K GF+ +V + AIL +Y++ + +
Sbjct: 219 GLLPDQSNFASALSAVKGLGNLDVLESLRVLA--LKTGFERDVVIGTAILNVYSRDTSVL 276
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+ + F E + +W+++IAA + + ++ R I + C
Sbjct: 277 DTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITG-LAQC 335
Query: 412 AKMASLEMV-TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
++ ++ Q+ I V N L+ Y++ G + A++LF+ M + +SW
Sbjct: 336 GRIDDARILFEQIPEPI--------VVSWNALITGYMQNGMVNEAKELFDKMPFRNTISW 387
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
+ +I GYAQ G +EAL L + G+ P+L +L + ACS++ +E G ++ +
Sbjct: 388 AGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHS-LAV 446
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ G C+ ++ + + + A ++M DIV W S LA+
Sbjct: 447 KVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTK-DIVSWNSFLAA 494
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 114/246 (46%), Gaps = 33/246 (13%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE-------- 87
S+ + ACS++ +L+ G +VH + CQ + N ++ MYGKC ++E
Sbjct: 420 SSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSR 479
Query: 88 -----------------------DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
+AR FD M R+ VSWT +I+ + Q N+A+ +
Sbjct: 480 MVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAF 539
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
M +P ++ C LG+ +G+Q+H IK S LI NALI+MY K
Sbjct: 540 KTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKC 599
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
D+R +F + +D+ +W ++I +++ G EA+ + M G PNE F +
Sbjct: 600 G-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVL-PNEVTFVGL 657
Query: 245 FSACSN 250
+ACS+
Sbjct: 658 LNACSH 663
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 191/592 (32%), Positives = 295/592 (49%), Gaps = 57/592 (9%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y L+ AC+SLR + + L+N +L Y + G AR D+MP
Sbjct: 14 YLHLLRACTSLRHAAAVHAHIARAHPA---ASLFLRNTLLAAYCRLGGPLPARRLLDEMP 70
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+RN VS+ +I S+ +++ + ++GV +F++ + + ACS G + GR
Sbjct: 71 RRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRA 130
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+HA I S + N+L++MY+K + +AR VF +D SW S+++ + + G
Sbjct: 131 VHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGA 190
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------- 251
E + F M+ G N F GSV CS
Sbjct: 191 REEMVRVF-AMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFL 249
Query: 252 ----------------ARILFNEIDSPDLASWNALIAG------VASHSNANEAMSLFSE 289
A LF + P++ +N +IAG V A+EA++L+SE
Sbjct: 250 VSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSE 309
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
++ R + P T S+L AC L G Q+H +IK F + + +A++ +Y
Sbjct: 310 VQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGC 369
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ + F+ K+ D V+W ++++ C+Q+ E+ LF L + +KPD T + VM
Sbjct: 370 MEDGFRCFRSSPKH-DIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMN 428
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVM--NGLMDIYIKCGSLGSARKLFNFMENPDV 467
ACA +A Q+ C+ TK+G FD F + N + +Y + G + +A + F ME+ DV
Sbjct: 429 ACASLAVARAGEQIQCFATKSG--FDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDV 486
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
VSWS++I +AQ GC +AL F M V PN +T +GVLTACSH GLV+EGL Y
Sbjct: 487 VSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYET 546
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M +YG+ PT +HC+CVVDLL RAG + +AE FI+ AD V+W+SLLAS
Sbjct: 547 MNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLAS 598
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 233/488 (47%), Gaps = 52/488 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+YA ++ACS L+ GR VH +L V + N +++MY KCG + +AR FD
Sbjct: 111 SYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVA 170
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL--GSVCL 154
+R+ VSW ++++G + + ++++ M + G+ F GS+IK CSG G++ +
Sbjct: 171 EERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDI 230
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
+H VIK+ S + +A+I MY K +++A +F + +V + +MIA F +
Sbjct: 231 AEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCR 290
Query: 215 ----LGYEL--EALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------NFARIL 255
+G E+ EAL ++E+ G QP EF F SV AC+ +
Sbjct: 291 TETVIGKEVASEALTLYSEVQSRG-MQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYT 349
Query: 256 FNEID-------------------------SP--DLASWNALIAGVASHSNANEAMSLFS 288
F E D SP D+ +W A+++G + +A+SLF
Sbjct: 350 FQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFH 409
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
E L PD T+ S++ AC G Q+ + K GFD + N+ + MYA+
Sbjct: 410 ESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSG 469
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ A F+E+ ++ D VSW+++I+ QH A + F M+ +++ P+ ITF V+
Sbjct: 470 DVDAATRRFQEM-ESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVL 528
Query: 409 GACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLF-NFMENPD 466
AC+ ++ + + + K GL+ + ++D+ + G L A N + + D
Sbjct: 529 TACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHAD 588
Query: 467 VVSWSSLI 474
V W SL+
Sbjct: 589 PVIWRSLL 596
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/516 (23%), Positives = 218/516 (42%), Gaps = 96/516 (18%)
Query: 40 GLISACSSLR---SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
G + C S R ++ + VH ++ + DV L + +++MY K G+L +A F +
Sbjct: 214 GSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSV 273
Query: 97 PQRNVVSWTAMIAGCSQNYQ------ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ NVV + MIAG + ++A+ LY ++ G+ P +FTF S+++AC+ G
Sbjct: 274 QEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAG 333
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ G+Q+H VIK +ALI +Y + D F + D+ +W +M++
Sbjct: 334 YLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVS 393
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC------------------SNFA 252
+ +AL F+E L G +P+ F SV +AC S F
Sbjct: 394 GCVQNELHEKALSLFHESLGAG-LKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFD 452
Query: 253 RIL----------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
R F E++S D+ SW+A+I+ A H A +A+ F EM
Sbjct: 453 RFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEM 512
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSV 349
D +++P+ +T +L AC + +G++ + + K G + C ++ + +
Sbjct: 513 VDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGR 572
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L +A +AD V W S++A+C H E + +R++ +++P
Sbjct: 573 LADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIM--ELEP---------- 620
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV-- 467
T Y+ L ++Y+ G L A K + M+ V
Sbjct: 621 -----------TSSASYVI-------------LYNMYLDAGELSLASKTRDLMKQRGVKK 656
Query: 468 ---VSWSSLILGYAQFGCGD----EALKLFTRMRSL 496
+SW L G F GD E+ ++T++ +
Sbjct: 657 EPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEM 692
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 129/256 (50%), Gaps = 12/256 (4%)
Query: 3 NDYVSSLCK------QNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLG 54
N ++ C+ + + +EAL Y Q+ ++P+ T++ ++ AC+ L+ G
Sbjct: 282 NTMIAGFCRTETVIGKEVASEALTLYSEVQSRG---MQPTEFTFSSVLRACNLAGYLEFG 338
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
+++H ++ Q D + + ++++Y G +ED F P+ ++V+WTAM++GC QN
Sbjct: 339 KQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQN 398
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
A+ L+ + L +G+ P FT S++ AC+ L G Q+ KS +
Sbjct: 399 ELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMG 458
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
N+ + MY + + A F + DV SW ++I+ ++ G +AL F+EM+
Sbjct: 459 NSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMV-DAKV 517
Query: 235 QPNEFIFGSVFSACSN 250
PNE F V +ACS+
Sbjct: 518 VPNEITFLGVLTACSH 533
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 2/206 (0%)
Query: 8 SLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQ 67
S C QN +E ++ ++ T + +++AC+SL + G ++ S
Sbjct: 393 SGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFD 452
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
V+ N ++MY + G ++ A F +M +VVSW+A+I+ +Q+ DA+ + +M
Sbjct: 453 RFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEM 512
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ-NALIAMYTKFDR 186
+ + V+P + TF ++ ACS G V G + + + K S I ++ + + R
Sbjct: 513 VDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGR 572
Query: 187 ILDARNVFS-GIARKDVTSWGSMIAA 211
+ DA S GI D W S++A+
Sbjct: 573 LADAEAFISNGIFHADPVIWRSLLAS 598
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 187/576 (32%), Positives = 278/576 (48%), Gaps = 69/576 (11%)
Query: 69 DVVLQNHILNMYGKCGSLE--DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
DV N +L Y C SL+ DAR F+KMP+RN+VSWT MI+G + A ++ +
Sbjct: 157 DVSSWNSMLTGY--CHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCK 214
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M + G++P Q F S + A GLG++ + L +K+ ++ A++ +Y++
Sbjct: 215 MHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTS 274
Query: 187 ILD-ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+LD A F + ++ +W +MIAA S G A+ + I G
Sbjct: 275 VLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQ 334
Query: 246 SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE----------- 294
+ ARILF +I P + SWNALI G + NEA LF +M R
Sbjct: 335 CGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGY 394
Query: 295 --------------------LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+LP ++ S+ AC + L G QVHS +K+G N
Sbjct: 395 AQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNS 454
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN-------------- 380
CNA++TMY KC + A VF + D VSWNS +AA +Q++
Sbjct: 455 FACNALITMYGKCRNMEYARQVFSRM-VTKDIVSWNSFLAALVQNDLLDEARNTFDNMLS 513
Query: 381 -----------------QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
Q+ E F M P+ ++G C + + ++ Q+
Sbjct: 514 RDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQI 573
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H K G+ ++ V N L+ +Y KCG S R++F+ ME D+ +W+++I GYAQ G G
Sbjct: 574 HTVAIKLGMDSELIVANALISMYFKCGCADS-RRIFDLMEERDIFTWNTIITGYAQHGLG 632
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
EA+K++ M S GV PN VT VG+L ACSH GLV+EG ++ M +YG+ P EH +C
Sbjct: 633 REAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYAC 692
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+VDLL R G V AE FI M + D V+W +LL +
Sbjct: 693 MVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGA 728
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 208/426 (48%), Gaps = 36/426 (8%)
Query: 52 QLGRKVHDHILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
Q GR IL + +P VV N ++ Y + G + +A+ FDKMP RN +SW MIAG
Sbjct: 334 QCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAG 393
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
+QN + +A+ L ++ +SG++P + SI ACS + ++ G Q+H+ +K +
Sbjct: 394 YAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFN 453
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
A NALI MY K + AR VFS + KD+ SW S +AA + N++L
Sbjct: 454 SFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQ-----------NDLLD 502
Query: 231 HGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
AR F+ + S D SW +I+ A +NEAM F M
Sbjct: 503 E--------------------ARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTM 542
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
LP+ + LL C G Q+H+ IK+G DS + V NA+++MY KC
Sbjct: 543 FCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC- 601
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
++ +F +L + D +WN+II QH E +++ M ++ + P+ +TF ++ A
Sbjct: 602 ADSRRIF-DLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNA 660
Query: 411 CAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSL-GSARKLFNFMENPDVV 468
C+ ++ + +++ GL ++D+ + G + G+ + +++ PD V
Sbjct: 661 CSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTV 720
Query: 469 SWSSLI 474
WS+L+
Sbjct: 721 IWSALL 726
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 236/529 (44%), Gaps = 64/529 (12%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
R H + +S C + G+ G + +AR FD MP+R++++W +MI+ N
Sbjct: 26 RHAHGELEVSGCSARI-------RDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHN 78
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA-HVIKSEHGSHLIA 173
+ A LY + G G+I+ SG G LGR L A V + +A
Sbjct: 79 GMPDAARDLY-----DAISGGNMRTGAIL--LSGYGR--LGRVLEARRVFDGMLERNTVA 129
Query: 174 QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA 233
NA+I+ Y + I AR +F + +DV+SW SM+ + CH +M+
Sbjct: 130 WNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGY----------CHSLQMVD--- 176
Query: 234 YQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
AR LF ++ +L SW +I+G N +A +F +M
Sbjct: 177 ------------------ARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHRE 218
Query: 294 ELLPDGLTVHSLLCAC--IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
LLPD S L A +G L + + ++V + +K GF+ +V + AIL +Y++ + +
Sbjct: 219 GLLPDQSNFASALSAVKGLGNLDVLESLRVLA--LKTGFERDVVIGTAILNVYSRDTSVL 276
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+ + F E + +W+++IAA + + ++ R I + C
Sbjct: 277 DTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITG-LAQC 335
Query: 412 AKMASLEMV-TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
++ ++ Q+ I V N L+ Y++ G + A++LF+ M + +SW
Sbjct: 336 GRIDDARILFEQIPEPI--------VVSWNALITGYMQNGMVNEAKELFDKMPFRNTISW 387
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
+ +I GYAQ G +EAL L + G+ P+L +L + ACS++ +E G ++ +
Sbjct: 388 AGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHS-LAV 446
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ G C+ ++ + + + A ++M DIV W S LA+
Sbjct: 447 KVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTK-DIVSWNSFLAA 494
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 114/246 (46%), Gaps = 33/246 (13%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE-------- 87
S+ + ACS++ +L+ G +VH + CQ + N ++ MYGKC ++E
Sbjct: 420 SSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSR 479
Query: 88 -----------------------DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
+AR FD M R+ VSWT +I+ + Q N+A+ +
Sbjct: 480 MVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAF 539
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
M +P ++ C LG+ +G+Q+H IK S LI NALI+MY K
Sbjct: 540 KTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKC 599
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
D+R +F + +D+ +W ++I +++ G EA+ + M G PNE F +
Sbjct: 600 G-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVL-PNEVTFVGL 657
Query: 245 FSACSN 250
+ACS+
Sbjct: 658 LNACSH 663
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 179/560 (31%), Positives = 289/560 (51%), Gaps = 67/560 (11%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ 113
R++ D I Q +V N +L++Y K G L DAR F +MP+R+ VSWT M+ G ++
Sbjct: 82 ARRLFDEI--PAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNR 139
Query: 114 NYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA 173
+ +AIK+++ M+ G+ P QFT +++ +C+ + +GR++H+ V+K S +
Sbjct: 140 VGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPV 199
Query: 174 QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA 233
N+++ MY K AR VF + + V+SW +M++ + LG AL F M
Sbjct: 200 ANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENM----- 254
Query: 234 YQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
P+ I SWNA+IAG + +A+ FS M
Sbjct: 255 --PDRTIV------------------------SWNAVIAGYNQNGLNAKALWFFSRMLSY 288
Query: 294 ELL-PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ PD T+ S+L AC + G QVH+YI++ V NA+++MYAK + N
Sbjct: 289 STMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVEN 348
Query: 353 ALLVFKE--------------------LG------------KNADSVSWNSIIAACLQHN 380
A V ++ LG N D V+W ++I Q+
Sbjct: 349 ARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNG 408
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
+E LF M+ S +P+ T V+ CA +A LE Q+HC ++ V N
Sbjct: 409 HNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSN 468
Query: 441 GLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
++ +Y + GSL AR++F+ + + V+W+S+I+ AQ G G++A+ LF M +GV
Sbjct: 469 SIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVK 528
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
P+ +T VGVL+AC+HVG V+EG ++ +++++GI+P H +C+VDLLARAG EA++
Sbjct: 529 PDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQE 588
Query: 560 FINQMACDADIVVWKSLLAS 579
FI QM + D + W SLL++
Sbjct: 589 FIQQMPVEPDAIAWGSLLSA 608
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 198/463 (42%), Gaps = 126/463 (27%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHIL---LSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
T ++S+C++ + +GRKVH ++ LS C P + N +LNMYGKCG E AR F
Sbjct: 164 TLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVP---VANSVLNMYGKCGDAETARAVF 220
Query: 94 DKMPQRNV-------------------------------VSWTAMIAGCSQNYQENDAIK 122
++MP+R+V VSW A+IAG +QN A+
Sbjct: 221 ERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALW 280
Query: 123 LYIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+ +ML M P +FT S++ AC+ LG V +G+Q+HA++++S NALI+MY
Sbjct: 281 FFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMY 340
Query: 182 TK-----------------------FDRILD----------ARNVFSGIARKDVTSWGSM 208
K F +L+ AR +F ++ +DV +W +M
Sbjct: 341 AKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAM 400
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------ 250
I + + G+ EA+ F M+ G +PN + +V S C++
Sbjct: 401 IVGYEQNGHNDEAMELFRLMIRSGP-EPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSL 459
Query: 251 ----------------------FARILFNEID-SPDLASWNALIAGVASHSNANEAMSLF 287
+AR +F+ + + +W ++I +A H +A+ LF
Sbjct: 460 QEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLF 519
Query: 288 SEMRDRELLPDGLTVHSLLCACI-------GRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
EM + PD +T +L AC G+ Q H + +M + +
Sbjct: 520 EEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYA------CM 573
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ + A+ + A +++ D+++W S+++AC H A+
Sbjct: 574 VDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNAD 616
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 102/191 (53%), Gaps = 23/191 (12%)
Query: 35 PSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
P++Y A ++S C+SL L+ G+++H + S + + N I+ MY + GSL AR
Sbjct: 427 PNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRV 486
Query: 93 FDKMPQRN-VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD++ R V+WT+MI +Q+ DA+ L+ +ML+ GV P + TF ++ AC+ +G
Sbjct: 487 FDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGF 546
Query: 152 VCLGRQLHAHVIKSEHG-----SH------LIAQNALIAMYTKFDRILDARNVFSGIARK 200
V G++ + ++ +HG SH L+A+ L + +F + +
Sbjct: 547 VDEGKR-YFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMP--------VEP 597
Query: 201 DVTSWGSMIAA 211
D +WGS+++A
Sbjct: 598 DAIAWGSLLSA 608
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 187/613 (30%), Positives = 298/613 (48%), Gaps = 49/613 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+ +LC +AL + S + Y L C R++ G +
Sbjct: 71 LRALCSHGQLAQALWLLESSPEPPD----EGAYVALFRLCEWRRAVDAGMRACARADAEH 126
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ L N +L+M + G + A F KMP+R+V SW M+ G + +A+ LY
Sbjct: 127 PSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYY 186
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+ML +G+ P +TF +++ C G+ +GR++HAHV++ G + NAL+ MY K
Sbjct: 187 RMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCG 246
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I+ AR VF G+A D SW +MIA + +E EA + QPN SV
Sbjct: 247 DIVAARKVFDGMAVTDCISWNAMIAGHFE-NHECEAGLELFLTMLENEVQPNLMTITSVT 305
Query: 246 SACSNFARI----------------------------------------LFNEIDSPDLA 265
A + + +F+ +++ D
Sbjct: 306 VASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAM 365
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW A+I+G + ++A+ +++ M + PD +T+ S L AC L G+++H
Sbjct: 366 SWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELA 425
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA-CLQHNQAEE 384
GF V V NA+L MYAK + A+ VFK + + D VSW+S+IA C H E
Sbjct: 426 QNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEK-DVVSWSSMIAGFCFNHRSFEA 484
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
L+ + R + +KP+ +TF + ACA +L ++H Y+ + G+ + +V N L+D
Sbjct: 485 LY--YFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLD 542
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y+KCG A F+ DVVSW+ ++ G+ G GD AL LF +M +G P+ VT
Sbjct: 543 LYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVT 602
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
V +L ACS G+V +G L+ +M ++ I+P +H +C+VDLL+R G + EA + IN+M
Sbjct: 603 FVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRM 662
Query: 565 ACDADIVVWKSLL 577
D VW +LL
Sbjct: 663 PIKPDAAVWGALL 675
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 182/338 (53%), Gaps = 8/338 (2%)
Query: 241 FGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
FG ++ A FA++ D+ SWN ++ G EA+ L+ M + PD
Sbjct: 144 FGEIWHAWRVFAKM-----PERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVY 198
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
T +L C G G +VH+++++ GF V V NA++TMYAKC + A VF +
Sbjct: 199 TFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGM 258
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
D +SWN++IA ++++ E LF ML ++++P+ +T V A ++ +
Sbjct: 259 AVT-DCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFA 317
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
++H + K G A DV N L+ +Y G +G A K+F+ ME D +SW+++I GY +
Sbjct: 318 KEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKN 377
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
G D+AL+++ M VSP+ VT+ L AC+ +G ++ G+ L+ + +N+ G I
Sbjct: 378 GFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNK-GFIRYVVV 436
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++++ A++ + +A + MA + D+V W S++A
Sbjct: 437 ANALLEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIA 473
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 220/491 (44%), Gaps = 57/491 (11%)
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH-LIAQNALIAMYTKFDRILDARN 192
P + + ++ + C +V G + A +EH S L NA+++M +F I A
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACARA-DAEHPSFGLRLGNAMLSMLVRFGEIWHAWR 152
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF- 251
VF+ + +DV SW M+ + K+G+ EAL + ML G +P+ + F V C
Sbjct: 153 VFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG-MRPDVYTFPCVLRTCGGIP 211
Query: 252 ---------------------------------------ARILFNEIDSPDLASWNALIA 272
AR +F+ + D SWNA+IA
Sbjct: 212 DWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIA 271
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G + + LF M + E+ P+ +T+ S+ A + ++H + +K GF
Sbjct: 272 GHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAI 331
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
+V CN+++ MY + +A +F + + D++SW ++I+ ++ ++ +++ M
Sbjct: 332 DVAFCNSLIQMYTSLGRMGDAGKIFSRM-ETKDAMSWTAMISGYEKNGFPDKALEVYALM 390
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
+ PD +T + ACA + L++ +LH G V V N L+++Y K +
Sbjct: 391 ELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHI 450
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNLVTLVGVLTA 511
A ++F FM DVVSWSS+I G+ EAL F M LG V PN VT + L+A
Sbjct: 451 DKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM--LGHVKPNSVTFIAALSA 508
Query: 512 CSHVGLVEEG--LHLY--RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
C+ G + G +H Y R G +P + ++DL + G A + + +
Sbjct: 509 CAATGALRSGKEIHAYVLRCGIGSEGYVP-----NALLDLYVKCGQTSYAWAQFS-VHSE 562
Query: 568 ADIVVWKSLLA 578
D+V W +L+
Sbjct: 563 KDVVSWNIMLS 573
>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Brachypodium distachyon]
Length = 773
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 183/559 (32%), Positives = 287/559 (51%), Gaps = 54/559 (9%)
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
V + + ++ MY +CGSL DA FD+M +R+VV+WTA+++GC +N + I +QM++
Sbjct: 151 VAVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIR 210
Query: 130 ----SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
SG P T S ++AC LG + GR LH + +K + +AL +MY+K D
Sbjct: 211 LAGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCD 270
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
DA +F + KDV SW +I A+ + G EA+ F EM G QP+E + V
Sbjct: 271 MTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSG-LQPDEVLVSCVL 329
Query: 246 SACSNFARI----------------------------------------LFNEIDSPDLA 265
S + A + +F + D
Sbjct: 330 SGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDE 389
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDR---ELLPDGLTVHSLLCAC--IGRLTLYQGMQ 320
SW+ ++AG + + L+ +M+ R E L D ++ S + +C +GRL L G
Sbjct: 390 SWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRL--GQS 447
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
VH Y IK D N + N+++ MY +C A +F D V+WN++I++
Sbjct: 448 VHCYSIKCLLDEN-SITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVG 506
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
++ + L+ +ML +KP+ T V+ ACA +A+LE LH Y+ GL DV +
Sbjct: 507 RSNDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSIST 566
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+D+Y KCG LG+AR +F+ M DVV+W+ +I GY G ++ALKLF+ M + + P
Sbjct: 567 ALVDMYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKP 626
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
N +T + +L+AC H GLV+EG L+ I Y + P +H +C+VDLL ++G + EAED
Sbjct: 627 NSLTFLAILSACCHAGLVDEGRKLF-IRMGGYRLEPNLKHYACMVDLLGKSGLLQEAEDL 685
Query: 561 INQMACDADIVVWKSLLAS 579
+ M D VW +LL++
Sbjct: 686 VLAMPIKPDGGVWGTLLSA 704
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 232/494 (46%), Gaps = 50/494 (10%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
++ R T + AC L L GR +H + + + ++ + + +MY KC
Sbjct: 213 GDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMT 272
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
EDA + F ++ +++VVSWT +I + +A++L+ +M QSG+ P + ++
Sbjct: 273 EDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVL--- 329
Query: 147 SGLGS---VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
SGLGS V G+ HA +I+ G ++ N+LI+MY KF+ + A VF + ++D
Sbjct: 330 SGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDE 389
Query: 204 SWGSMIAAFSKLGYELEALCHFNEM--LHHGAYQPNEFIFGSVFSACSNFARILF----- 256
SW M+A + K G +++ L + +M H + + S S+CS R+
Sbjct: 390 SWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVH 449
Query: 257 ----------NEIDSP-------------------------DLASWNALIAGVASHSNAN 281
N I + D+ +WNALI+ + +N
Sbjct: 450 CYSIKCLLDENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSN 509
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
+A+SL+ +M ++ P+ T+ +++ AC L G +HSY+ MG +S+V + A++
Sbjct: 510 DALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSISTALV 569
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
MY KC L A +F + + D V+WN +I+ H +A + +LFS M A IKP+
Sbjct: 570 DMYTKCGQLGTARGIFDSMLQR-DVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNS 628
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
+TF ++ AC ++ +L + L ++ ++D+ K G L A L
Sbjct: 629 LTFLAILSACCHAGLVDEGRKLFIRMGGYRLEPNLKHYACMVDLLGKSGLLQEAEDLVLA 688
Query: 462 ME-NPDVVSWSSLI 474
M PD W +L+
Sbjct: 689 MPIKPDGGVWGTLL 702
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 131/565 (23%), Positives = 252/565 (44%), Gaps = 62/565 (10%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG--CSQNYQENDAIKLY 124
+PD + +++ Y G A + F P + W +++ C+ ++ + A+ +
Sbjct: 46 RPDFAAK--LVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHHCASDF--DSALSAH 101
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK----SEHGSHLIAQNALIAM 180
+M SG P +FT A + L ++ +G +H++ +K + GS + ++L+ M
Sbjct: 102 RRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGS-VAVSSSLVYM 160
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH---HGAYQPN 237
Y + + DA +F + +DV +W ++++ + G + +C+ +M+ +PN
Sbjct: 161 YARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRLAGDSGARPN 220
Query: 238 EFIFGSVFSAC----------------------------------------SNFARILFN 257
S AC + A ILF
Sbjct: 221 SRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTEDACILFP 280
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
E+ D+ SW LI A EA+ LF EM L PD + V +L + +
Sbjct: 281 ELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSGLGSSANVNR 340
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G H+ II+ F +V + N++++MY K ++ A VF L + D SW+ ++A
Sbjct: 341 GKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDE-SWSLMVAGYC 399
Query: 378 QHNQAEELFRLFSRMLA---SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
+ + L+ +M + D + + +C+++ L + +HCY K L
Sbjct: 400 KAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIKC-LLD 458
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
+ + N L+ +Y +CG+ A K+F + DVV+W++LI Y+ G ++AL L+ +M
Sbjct: 459 ENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQM 518
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
+ V PN TL+ V++AC+++ +E G L+ ++N G+ + +VD+ + G
Sbjct: 519 LTEDVKPNSSTLITVISACANLAALEHGELLHSYVKN-MGLESDVSISTALVDMYTKCGQ 577
Query: 554 VHEAEDFINQMACDADIVVWKSLLA 578
+ A + M D+V W +++
Sbjct: 578 LGTARGIFDSM-LQRDVVTWNVMIS 601
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 206/462 (44%), Gaps = 55/462 (11%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+ + C++ L EA+ + + ++ + ++S S ++ G+ H I+
Sbjct: 294 IGAYCRRGLAREAVELFQ-EMEQSGLQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRN 352
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
V++ N +++MYGK ++ A F + QR+ SW+ M+AG + + ++LY
Sbjct: 353 FGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSLMVAGYCKAGLDVKCLELYR 412
Query: 126 QML---QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
QM + + S I +CS LG + LG+ +H + IK + I N+LI MY
Sbjct: 413 QMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIKCLLDENSIT-NSLIGMYG 471
Query: 183 KFDRILDARNVFS-GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
+ A +F+ R+DV +W ++I+++S +G +AL + +ML +PN
Sbjct: 472 RCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQMLTEDV-KPNSSTL 530
Query: 242 GSVFSACSNF----------------------------------------ARILFNEIDS 261
+V SAC+N AR +F+ +
Sbjct: 531 ITVISACANLAALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQLGTARGIFDSMLQ 590
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
D+ +WN +I+G H AN+A+ LFSEM + P+ LT ++L AC + +G ++
Sbjct: 591 RDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSACCHAGLVDEGRKL 650
Query: 322 HSYIIKMG---FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
I+MG + N+ ++ + K +L A + + D W ++++AC
Sbjct: 651 ---FIRMGGYRLEPNLKHYACMVDLLGKSGLLQEAEDLVLAMPIKPDGGVWGTLLSACKV 707
Query: 379 HNQAEELFRLFSRMLASQIKPD--HITFNDVMGACAKMASLE 418
H+ E R+ + +S + D +I ++ G+ K +E
Sbjct: 708 HDNFEMGLRVAKKAFSSDPRNDGYYILMSNSYGSAEKWDEIE 749
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 2/210 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +SS N+AL Y +++ ST +ISAC++L +L+ G +H ++
Sbjct: 496 NALISSYSHVGRSNDALSLYG-QMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVK 554
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ DV + +++MY KCG L AR FD M QR+VV+W MI+G + + N A+K
Sbjct: 555 NMGLESDVSISTALVDMYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALK 614
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ +M + P TF +I+ AC G V GR+L + +L ++ +
Sbjct: 615 LFSEMEAGSIKPNSLTFLAILSACCHAGLVDEGRKLFIRMGGYRLEPNLKHYACMVDLLG 674
Query: 183 KFDRILDARN-VFSGIARKDVTSWGSMIAA 211
K + +A + V + + D WG++++A
Sbjct: 675 KSGLLQEAEDLVLAMPIKPDGGVWGTLLSA 704
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 9/162 (5%)
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
+LH + +GL+ L+ Y G G A F+ PD W+SL+ +
Sbjct: 33 RLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHHCAS 92
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTRE 539
D AL RMR+ G P+ T +A + + + G +H Y + ++G++
Sbjct: 93 DFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSV---KFGLLAGDG 149
Query: 540 HC---SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
S +V + AR G + +A ++M + D+V W ++++
Sbjct: 150 SVAVSSSLVYMYARCGSLGDAVKLFDEMV-ERDVVAWTAVVS 190
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 179/563 (31%), Positives = 301/563 (53%), Gaps = 44/563 (7%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP T+ ++ AC + S + G VH + S + +V + N +++MYG+CG+ E+AR
Sbjct: 142 RPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQ 201
Query: 92 GFDKMPQRNV---VSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACS 147
FD+M +R V VSW +++A Q A+K++ +M + G+ P + +++ AC+
Sbjct: 202 VFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACA 261
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
+G+ G+Q+H + ++S + NA++ MY K + +A VF + KDV SW +
Sbjct: 262 SVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNA 321
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASW 267
M+ +S++G +AL F ++ +I N + +W
Sbjct: 322 MVTGYSQIGRFDDALGLFEKIREE---------------------KIELN------VVTW 354
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
+A+IAG A EA+ +F +M P+ +T+ SLL C TL G + H + IK
Sbjct: 355 SAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIK 414
Query: 328 --MGFDSNVP-----VCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQH 379
+ D N P V NA++ MY+KC A +F + K+ V+W +I QH
Sbjct: 415 WILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQH 474
Query: 380 NQAEELFRLFSRMLASQ--IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL-AFDV 436
+A E LFS+ML + P+ T + + ACA++ +L Q+H Y+ + + +
Sbjct: 475 GEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAML 534
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
FV N L+D+Y K G + +AR +F+ M + VSW+SL+ GY G G+EAL++F M+ +
Sbjct: 535 FVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKV 594
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
+ P+ VT V VL ACSH G+V++G++ + M ++G++P EH +C+VDLL+RAG + E
Sbjct: 595 XLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDE 654
Query: 557 AEDFINQMACDADIVVWKSLLAS 579
A + I M VW +LL++
Sbjct: 655 AMELIRGMPMKPTPAVWVALLSA 677
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 189/449 (42%), Gaps = 89/449 (19%)
Query: 24 FSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYG 81
F + ++ IRP + ++ AC+S+ + G++VH + L S DV + N +++MY
Sbjct: 237 FERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYA 296
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL------------------ 123
KCG +E+A F++M ++VVSW AM+ G SQ + +DA+ L
Sbjct: 297 KCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSA 356
Query: 124 -----------------YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK-- 164
+ QML G P T S++ C+ G++ G++ H H IK
Sbjct: 357 VIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWI 416
Query: 165 -----SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD--VTSWGSMIAAFSKLGY 217
++ G L+ NALI MY+K AR +F I KD V +W +I ++ G
Sbjct: 417 LNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGE 476
Query: 218 ELEALCHFNEMLHHGAY-QPNEFIFGSVFSACSNF------------------------- 251
EAL F++ML + PN F AC+
Sbjct: 477 ANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFV 536
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR++F+ + + SW +L+ G H EA+ +F EM+ L
Sbjct: 537 ANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXL 596
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNAL 354
+PDG+T +L AC + QG+ + + K G ++ + ++ L A+
Sbjct: 597 VPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAM 656
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ + + W ++++AC + E
Sbjct: 657 ELIRGMPMKPTPAVWVALLSACRVYANVE 685
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 131/245 (53%), Gaps = 11/245 (4%)
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSV-SWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
I++MY + AL V + L ++ +V WN +I + E++ +L+ RM +
Sbjct: 83 IISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWR 142
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
PDH TF V+ AC ++ S +H + +G ++VFV NGL+ +Y +CG+ +AR++
Sbjct: 143 PDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQV 202
Query: 459 FNFMENP---DVVSWSSLILGYAQFGCGDEALKLFTRM-RSLGVSPNLVTLVGVLTACSH 514
F+ M D+VSW+S++ Y Q G A+K+F RM LG+ P+ V+LV VL AC+
Sbjct: 203 FDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACAS 262
Query: 515 VGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
VG G +H Y + G+ + VVD+ A+ G + EA +M D+V
Sbjct: 263 VGAWSRGKQVHGYALRS---GLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVK-DVVS 318
Query: 573 WKSLL 577
W +++
Sbjct: 319 WNAMV 323
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 171/551 (31%), Positives = 280/551 (50%), Gaps = 42/551 (7%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D + + ++ +Y + G +EDAR FDKMP ++ V W M+ G + + N A+K++ M
Sbjct: 6 DEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMR 65
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
P TF S++ C+ G QLH VI + NAL+AMY+KF ++
Sbjct: 66 NCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLS 125
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
DA +F+ + +V +W MIA F + G+ EA F+EM+ G P+ F S +
Sbjct: 126 DALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGV-SPDSITFASFLPSV 184
Query: 249 SNFARI----------------------------------------LFNEIDSPDLASWN 268
+ A + +F + + D+
Sbjct: 185 TESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCT 244
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
A+I+G + N+A+ +F + + ++ P+ +T+ S+L AC G TL G ++H+ I+K
Sbjct: 245 AIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKH 304
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
G D V +AI+ MYAKC L A +F+ + + D+V WN+II C Q+ + +E L
Sbjct: 305 GLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEK-DAVCWNAIITNCSQNGKPQEAIDL 363
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
F +M + D ++ + + ACA + +L +H ++ K +VF + L+D+Y K
Sbjct: 364 FRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGK 423
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
CG+L AR +F+ M + VSW+S+I Y G + +L LF +M G+ P+ VT + +
Sbjct: 424 CGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTI 483
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
L+AC H G V++G+ +R M EYGI EH +C+VDL RAG ++EA + I M
Sbjct: 484 LSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSP 543
Query: 569 DIVVWKSLLAS 579
D VW +LL +
Sbjct: 544 DDGVWGTLLGA 554
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 227/493 (46%), Gaps = 46/493 (9%)
Query: 26 QNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
++ N + +P+ T+A ++S C+S + G ++H ++ D ++ N ++ MY K
Sbjct: 62 EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G L DA F+ MP NVV+W MIAG QN ++A L+ +M+ +GV P TF S +
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
+ + S+ G+++H ++++ + ++ALI +Y K + A +F D+
Sbjct: 182 PSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIV 241
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------- 254
++I+ + G +AL F +L PN SV AC+ A +
Sbjct: 242 VCTAIISGYVLNGLNNDALEIFRWLLEE-KMSPNAVTLASVLPACAGLATLNLGKELHAN 300
Query: 255 -------------------------------LFNEIDSPDLASWNALIAGVASHSNANEA 283
+F + D WNA+I + + EA
Sbjct: 301 ILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEA 360
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
+ LF +M L D +++ + L AC L+ G +HS++IK FDS V +A++ M
Sbjct: 361 IDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDM 420
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
Y KC L A VF ++ + + VSWNSIIAA H E LF +ML I+PDH+T
Sbjct: 421 YGKCGNLSVARCVF-DMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVT 479
Query: 404 FNDVMGACAKMASLEMVTQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
F ++ AC ++ Q C + G+ + ++D++ + G L A + M
Sbjct: 480 FLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNM 539
Query: 463 E-NPDVVSWSSLI 474
+PD W +L+
Sbjct: 540 PFSPDDGVWGTLL 552
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 189/352 (53%), Gaps = 8/352 (2%)
Query: 233 AYQPNEFIFGSVF-----SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
+ +EF+ S+ + C AR LF+++ + D WN ++ G N A+ +F
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
+MR+ + P+ +T S+L C G Q+H +I GF + V NA++ MY+K
Sbjct: 62 EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
L +AL +F + + + V+WN +IA +Q+ +E LFS M+++ + PD ITF
Sbjct: 122 GQLSDALKLFNTM-PDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
+ + + ASL+ ++H YI + G+A DVF+ + L+DIY KC +G A K+F N D+
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDI 240
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
V +++I GY G ++AL++F + +SPN VTL VL AC+ + + G L+
Sbjct: 241 VVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHAN 300
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++G+ R S ++D+ A+ G + A +M + D V W +++ +
Sbjct: 301 IL-KHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMP-EKDAVCWNAIITN 350
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 186/397 (46%), Gaps = 41/397 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+A + + + SL+ G+++H +IL DV L++ ++++Y KC + A F +
Sbjct: 176 TFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQS 235
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++V TA+I+G N NDA++++ +L+ + P T S++ AC+GL ++ LG+
Sbjct: 236 TNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGK 295
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+LHA+++K +A++ MY K R+ A +F + KD W ++I S+ G
Sbjct: 296 ELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNG 355
Query: 217 YELEALCHFNEM------------------------LHHGAYQPNEFIFGS--------- 243
EA+ F +M LHHG + I G+
Sbjct: 356 KPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAES 415
Query: 244 ----VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
++ C N AR +F+ + + SWN++IA SH + +++LF +M + + P
Sbjct: 416 ALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQP 475
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
D +T ++L AC + +G+Q + + G + + I+ ++ + L A
Sbjct: 476 DHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFET 535
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
K + + D W +++ AC H EL + SR L
Sbjct: 536 IKNMPFSPDDGVWGTLLGACRVHGNV-ELAEVASRCL 571
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 107/198 (54%), Gaps = 1/198 (0%)
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
MGF+ + V ++++ +YA+ + +A +F ++ N D V WN ++ ++ + +
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKM-PNKDCVLWNVMLNGFVKCGEPNSAVK 59
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
+F M Q KP+ ITF V+ CA A E QLH + G FD V N L+ +Y
Sbjct: 60 VFEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYS 119
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
K G L A KLFN M + +VV+W+ +I G+ Q G DEA LF+ M S GVSP+ +T
Sbjct: 120 KFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFAS 179
Query: 508 VLTACSHVGLVEEGLHLY 525
L + + +++G ++
Sbjct: 180 FLPSVTESASLKQGKEIH 197
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 188/586 (32%), Positives = 298/586 (50%), Gaps = 57/586 (9%)
Query: 47 SLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS--LEDARMGFDKMPQRNVVSW 104
S SL VH HI + P + L+N +L Y + G+ AR D+MP+RN VS+
Sbjct: 22 SCASLPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSF 81
Query: 105 TAMIAGCSQNYQENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI 163
+I S+ Q ++++ ++ ++ V +FT+ + + ACS G + G+ +HA +
Sbjct: 82 NLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAV 141
Query: 164 KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALC 223
+ N+L++MY + + +AR VF +D SW S+++ + ++G E L
Sbjct: 142 LEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLR 201
Query: 224 HFNEMLHHGAYQPNEFIFGSVFSACS---------------------------------- 249
F ++ A N F GSV CS
Sbjct: 202 VF-ALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVD 260
Query: 250 --------NFARILFNEIDSPDLASWNALIAGVASHSNA------NEAMSLFSEMRDREL 295
+ A LF + P++ +NA+IAG+ A EA+SL+SE++ R +
Sbjct: 261 MYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGM 320
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P T S++ AC + G Q+H ++K F + + +A++ +Y + + +
Sbjct: 321 EPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFR 380
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
F+ + K D V+W ++I+ C+Q+ E LF +L +KPD T + VM ACA +A
Sbjct: 381 CFRSVPKQ-DVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLA 439
Query: 416 SLEMVTQLHCYITKTGLAFDVFVM--NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ Q+ C+ TK+G FD F N + +Y + G++ +A + F ME+ DVVSWS++
Sbjct: 440 VVRTGEQMQCFATKSG--FDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAI 497
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I +AQ GC +AL+ F M V PN +T +GVLTACSH GLV+EGL Y IM+ EYG
Sbjct: 498 ISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYG 557
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ PT +HC+CVVDLL RAG + +AE FI + VVW+SLL S
Sbjct: 558 LCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGS 603
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/524 (25%), Positives = 238/524 (45%), Gaps = 56/524 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + + + E+L + + ++ TYA ++ACS L+ G+ VH +
Sbjct: 82 NLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAV 141
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
L V + N +++MY +CG + +AR FD +R+ VSW ++++G + + ++
Sbjct: 142 LEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLR 201
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACS-GLGSV-CLGRQLHAHVIKSEHGSHLIAQNALIAM 180
++ M + + F GS+IK CS G GSV + +H V+K+ + L +A++ M
Sbjct: 202 VFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDM 261
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL------EALCHFNEMLHHGAY 234
Y K + +A +F + +V + +MIA + + EAL ++E+ G
Sbjct: 262 YAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRG-M 320
Query: 235 QPNEFIFGSVFSACS-----NFARIL---------------------------------- 255
+P EF F SV AC+ F + +
Sbjct: 321 EPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFR 380
Query: 256 -FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
F + D+ +W A+I+G + A++LF E+ L PD T+ S++ AC
Sbjct: 381 CFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAV 440
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
+ G Q+ + K GFD + N+ + MYA+ + A+ F+E+ ++ D VSW++II+
Sbjct: 441 VRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEM-ESHDVVSWSAIIS 499
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLA 433
+ QH A + + F+ M+ +++ P+ ITF V+ AC+ + E + + GL
Sbjct: 500 SHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLC 559
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFN---FMENPDVVSWSSLI 474
V ++D+ + G L A F + P V W SL+
Sbjct: 560 PTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEP--VVWQSLL 601
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 187/613 (30%), Positives = 298/613 (48%), Gaps = 49/613 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+ +LC +AL + S + Y L C R++ G +
Sbjct: 71 LRALCSHGQLAQALWLLESSPEPPD----EGAYVALFRLCEWRRAVDAGMRACARADAEH 126
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ L N +L+M + G + A F KMP+R+V SW M+ G + +A+ LY
Sbjct: 127 PSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYY 186
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+ML +G+ P +TF +++ C G+ +GR++HAHV++ G + NAL+ MY K
Sbjct: 187 RMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCG 246
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I+ AR VF G+A D SW +MIA + +E EA + QPN SV
Sbjct: 247 DIVAARKVFDGMAVTDCISWNAMIAGHFE-NHECEAGLELFLTMLENEVQPNLMTITSVT 305
Query: 246 SACSNFARI----------------------------------------LFNEIDSPDLA 265
A + + +F+ +++ D
Sbjct: 306 VASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAM 365
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW A+I+G + ++A+ +++ M + PD +T+ S L AC L G+++H
Sbjct: 366 SWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELA 425
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA-CLQHNQAEE 384
GF V V NA+L MYAK + A+ VFK + + D VSW+S+IA C H E
Sbjct: 426 QNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEK-DVVSWSSMIAGFCFNHRSFEA 484
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
L+ + R + +KP+ +TF + ACA +L ++H Y+ + G+ + +V N L+D
Sbjct: 485 LY--YFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLD 542
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y+KCG A F+ DVVSW+ ++ G+ G GD AL LF +M +G P+ VT
Sbjct: 543 LYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVT 602
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
V +L ACS G+V +G L+ +M ++ I+P +H +C+VDLL+R G + EA + IN+M
Sbjct: 603 FVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRM 662
Query: 565 ACDADIVVWKSLL 577
D VW +LL
Sbjct: 663 PIKPDAAVWGALL 675
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 182/338 (53%), Gaps = 8/338 (2%)
Query: 241 FGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
FG ++ A FA++ D+ SWN ++ G EA+ L+ M + PD
Sbjct: 144 FGEIWHAWRVFAKM-----PERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVY 198
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
T +L C G G +VH+++++ GF V V NA++TMYAKC + A VF +
Sbjct: 199 TFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGM 258
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
D +SWN++IA ++++ E LF ML ++++P+ +T V A ++ +
Sbjct: 259 AVT-DCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFA 317
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
++H + K G A DV N L+ +Y G +G A K+F+ ME D +SW+++I GY +
Sbjct: 318 KEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKN 377
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
G D+AL+++ M VSP+ VT+ L AC+ +G ++ G+ L+ + +N+ G I
Sbjct: 378 GFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNK-GFIRYVVV 436
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++++ A++ + +A + MA + D+V W S++A
Sbjct: 437 ANALLEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIA 473
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 220/491 (44%), Gaps = 57/491 (11%)
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH-LIAQNALIAMYTKFDRILDARN 192
P + + ++ + C +V G + A +EH S L NA+++M +F I A
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACARA-DAEHPSFGLRLGNAMLSMLVRFGEIWHAWR 152
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF- 251
VF+ + +DV SW M+ + K+G+ EAL + ML G +P+ + F V C
Sbjct: 153 VFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG-MRPDVYTFPCVLRTCGGIP 211
Query: 252 ---------------------------------------ARILFNEIDSPDLASWNALIA 272
AR +F+ + D SWNA+IA
Sbjct: 212 DWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIA 271
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G + + LF M + E+ P+ +T+ S+ A + ++H + +K GF
Sbjct: 272 GHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAI 331
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
+V CN+++ MY + +A +F + + D++SW ++I+ ++ ++ +++ M
Sbjct: 332 DVAFCNSLIQMYTSLGRMGDAGKIFSRM-ETKDAMSWTAMISGYEKNGFPDKALEVYALM 390
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
+ PD +T + ACA + L++ +LH G V V N L+++Y K +
Sbjct: 391 ELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHI 450
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNLVTLVGVLTA 511
A ++F FM DVVSWSS+I G+ EAL F M LG V PN VT + L+A
Sbjct: 451 DKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM--LGHVKPNSVTFIAALSA 508
Query: 512 CSHVGLVEEG--LHLY--RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
C+ G + G +H Y R G +P + ++DL + G A + + +
Sbjct: 509 CAATGALRSGKEIHAYVLRCGIGSEGYVP-----NALLDLYVKCGQTSYAWAQFS-VHSE 562
Query: 568 ADIVVWKSLLA 578
D+V W +L+
Sbjct: 563 KDVVSWNIMLS 573
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 175/614 (28%), Positives = 314/614 (51%), Gaps = 43/614 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S ++ L EA Y + T + P + ++SAC+ + GR +H +
Sbjct: 116 LSGYAQRGLGKEAFRLYS-QMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQA 174
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ + N ++ +Y GS + A F M + V++ +I+G +Q A++++
Sbjct: 175 FCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFD 234
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M SG+ P T S++ AC+ +G + G+QLH++++K+ I + +L+ +Y K
Sbjct: 235 EMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCG 294
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I A ++F+ R +V W M+ A+ ++ ++ F +M G + PN+F + +
Sbjct: 295 DIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIH-PNKFTYPCIL 353
Query: 246 SACS----------------------------------------NFARILFNEIDSPDLA 265
C+ + AR + ++ D+
Sbjct: 354 RTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVV 413
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW ++IAG H EA++ F EM+D + PD + + S AC G + QG+Q+H+ +
Sbjct: 414 SWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARV 473
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
G+ +++ + N ++ +YA+C A +F+E+ + D ++WN +I+ Q E+
Sbjct: 474 YVSGYAADISIWNTLVNLYARCGRSEEAFSLFREI-DHKDEITWNGLISGFGQSRLYEQA 532
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
+F +M + K + TF + A A +A ++ Q+H KTG + V N L+ +
Sbjct: 533 LMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISL 592
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y KCGS+ A+ +F+ M + VSW+++I +Q G G EAL LF +M+ G+ PN VT
Sbjct: 593 YGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTF 652
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
+GVL ACSHVGLVEEGL ++ M N YG+ P +H +CVVD+L RAG + A F+++M
Sbjct: 653 IGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMP 712
Query: 566 CDADIVVWKSLLAS 579
A+ ++W++LL++
Sbjct: 713 ITANAMIWRTLLSA 726
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 147/567 (25%), Positives = 271/567 (47%), Gaps = 50/567 (8%)
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
++H ++ D ++ N ++++Y K G + AR F ++ R+ VSW AM++G +Q
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+A +LY QM + V+P + S++ AC+ GR +HA V K S N
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
ALIA+Y F A VF + D ++ ++I+ ++ G+ AL F+EM G +
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSG-LR 242
Query: 236 PNEFIFGSVFSACSNF----------------------------------------ARIL 255
P+ S+ +AC++ A +
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDI 302
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL--CACIGRL 313
FN D ++ WN ++ S+ ++ +F +M+ + P+ T +L C C G++
Sbjct: 303 FNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQI 362
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
L G Q+HS IK GF+S++ V ++ MY+K L A + + L K D VSW S+I
Sbjct: 363 EL--GEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKR-DVVSWTSMI 419
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
A +QH+ EE F M + PD+I ACA + ++ Q+H + +G A
Sbjct: 420 AGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYA 479
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
D+ + N L+++Y +CG A LF +++ D ++W+ LI G+ Q ++AL +F +M
Sbjct: 480 ADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKM 539
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAG 552
G N+ T + ++A +++ +++G ++ R ++ G E + ++ L + G
Sbjct: 540 SQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKT--GHTSETEVANALISLYGKCG 597
Query: 553 CVHEAEDFINQMACDADIVVWKSLLAS 579
+ +A+ ++M+ + V W +++ S
Sbjct: 598 SIEDAKMIFSEMSLRNE-VSWNTIITS 623
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 188/429 (43%), Gaps = 66/429 (15%)
Query: 14 LYNEALVAYD-----------FSQ-NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
L+N LVAY F Q T I TY ++ C+ ++LG ++H
Sbjct: 313 LWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLS 372
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ + + D+ + +++MY K L+ AR + + +R+VVSWT+MIAG Q+ +A+
Sbjct: 373 IKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEAL 432
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+ +M GV P S AC+G+ ++ G Q+HA V S + + + N L+ +Y
Sbjct: 433 ATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLY 492
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
+ R +A ++F I KD +W +I+ F + +AL F +M GA + N F F
Sbjct: 493 ARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGA-KYNVFTF 551
Query: 242 GSVFSACSNF----------------------------------------ARILFNEIDS 261
S SA +N A+++F+E+
Sbjct: 552 ISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSL 611
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
+ SWN +I + H EA+ LF +M+ L P+ +T +L AC + +G+
Sbjct: 612 RNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGL-- 669
Query: 322 HSYIIKMGFDSNVPVCNAILTMYA-------KCSVLCNALLVFKELGKNADSVSWNSIIA 374
SY M SNV N I YA + L A E+ A+++ W ++++
Sbjct: 670 -SYFKSM---SNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLS 725
Query: 375 ACLQHNQAE 383
AC H E
Sbjct: 726 ACKVHKNIE 734
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 142/275 (51%), Gaps = 4/275 (1%)
Query: 306 LCACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
L AC GR + +++H+ + G ++ + N ++ +YAK ++ A VFKEL
Sbjct: 49 LQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSR- 107
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
D VSW ++++ Q +E FRL+S+M + + P + V+ AC K +H
Sbjct: 108 DHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIH 167
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
+ K + FV N L+ +Y+ GS A ++F M D V++++LI G+AQ G G+
Sbjct: 168 AQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGE 227
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV 544
AL++F M+ G+ P+ VT+ +L AC+ VG +++G L+ + G+ +
Sbjct: 228 CALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKA-GMSFDYITEGSL 286
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+DL + G + A D N + ++V+W +L +
Sbjct: 287 LDLYVKCGDIETAHDIFN-LGDRTNVVLWNLMLVA 320
>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
Length = 829
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 180/592 (30%), Positives = 287/592 (48%), Gaps = 54/592 (9%)
Query: 40 GLISACSSLRSLQLGRKVHDHIL-LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
++ A +SL L G H + S DVV+ +L MY +CGS+ AR FD M
Sbjct: 46 AILDAFASLGDLSQGEFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVV 105
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
RNVVSW+AMIA +Q DA++L+++M GV TF S++ AC+ + ++ LG+ +
Sbjct: 106 RNVVSWSAMIAAYAQRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSI 165
Query: 159 HAHVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
H ++ G +I N ++ MY K + AR VF + K+ +W +MIAA S+
Sbjct: 166 HERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDR 225
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------------------- 249
EA EM G +PN+ SV AC+
Sbjct: 226 YKEAFALLGEMDLDG-LRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVAN 284
Query: 250 ------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
AR I++ D SW L+A A H + A+++ M +
Sbjct: 285 ALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKL 344
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D T +LL +C+ L G ++H + + G + + + A++ MY KC A F
Sbjct: 345 DSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAF 404
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+ D WN+++AA + +Q +E +F+RM + PD +TF ++ ACA +A+L
Sbjct: 405 DRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAAL 464
Query: 418 EMVTQLHCYITKTGLAFDV-------FVMNGLMDIYIKCGSLGSARKLF---NFMENPDV 467
+ H + + GL FD + ++++Y KCGSL A+ F DV
Sbjct: 465 GLGRLTHSRMLERGL-FDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDV 523
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
V+WS+++ Y+QFG +EAL+ F M+ GV P+ V+ V + CSH GLV E + +
Sbjct: 524 VAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTS 583
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ +++GI PT H +C+VDLL+RAG + EAE + + A W +LL++
Sbjct: 584 LRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSA 635
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 209/436 (47%), Gaps = 51/436 (11%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKC-QPDVVLQNHILNMYGKCGS 85
++ ++ T+ ++ AC+S+R++ LG+ +H+ I+ DV+L N I+NMYGKCG
Sbjct: 135 DHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGE 194
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
++ AR F++M +N V+W MIA CS++ + +A L +M G+ P + T S+I A
Sbjct: 195 VDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDA 254
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
C+ + S+ GR +H V S NAL+ +Y K ++ AR+ GI +D SW
Sbjct: 255 CAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKISW 314
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC----------------- 248
+++AA+++ G+ A+ M H G + + F F ++ +C
Sbjct: 315 TTLLAAYARHGHGKRAIAVIKRMDHEGV-KLDSFTFVNLLESCVAIAALALGEEIHDRLA 373
Query: 249 -----------------------SNFARILFNEI-DSPDLASWNALIAGVASHSNANEAM 284
+ AR F+ + D D+ WNAL+A E +
Sbjct: 374 ESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKETL 433
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA----- 339
+F+ M + + PD +T S+L AC L G HS +++ G V +A
Sbjct: 434 GIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTT 493
Query: 340 -ILTMYAKCSVLCNALLVFKEL--GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
++ MYAKC L +A F + + +D V+W++++AA Q +EE R F M
Sbjct: 494 SVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEG 553
Query: 397 IKPDHITFNDVMGACA 412
+KPD ++F + C+
Sbjct: 554 VKPDSVSFVSAIAGCS 569
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 158/316 (50%), Gaps = 5/316 (1%)
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SWN IA A + + A+ +F M + PD ++ ++L A L QG H +
Sbjct: 8 SWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEFFHRTV 67
Query: 326 IKM-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
+ G S+V V A+LTMY +C + +A F + + VSW+++IAA Q +
Sbjct: 68 CEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVR-NVVSWSAMIAAYAQRGHPGD 126
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG-LAFDVFVMNGLM 443
LF RM +K + ITF V+ ACA M ++ + +H I G L DV + N ++
Sbjct: 127 ALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIV 186
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
++Y KCG + AR++F ME + V+W+++I ++ EA L M G+ PN +
Sbjct: 187 NMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKI 246
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
TLV V+ AC+ + + G ++ I+ E G+ + +V+L + G + A +
Sbjct: 247 TLVSVIDACAWMQSIVRGRIVHEIVAGE-GLESDNTVANALVNLYGKCGKLRAARHALEG 305
Query: 564 MACDADIVVWKSLLAS 579
+ D + W +LLA+
Sbjct: 306 IETR-DKISWTTLLAA 320
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 4 DYVSSLCKQNLYNEALVAY---DFSQNNTNIRIRPS---------TYAGLISACSSLRSL 51
D +S + ++N L AY D + I R S T+ ++ AC+SL +L
Sbjct: 405 DRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAAL 464
Query: 52 QLGRKVHDHIL------LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ---RNVV 102
LGR H +L +L ++NMY KCGSL DA+ F K + +VV
Sbjct: 465 GLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVV 524
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
+W+AM+A SQ +A++ + M Q GV P +F S I CS G V
Sbjct: 525 AWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLV 574
>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Vitis vinifera]
Length = 724
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 169/557 (30%), Positives = 289/557 (51%), Gaps = 34/557 (6%)
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
++ H+ S V L L+ YGK G + A+ F++MP+R+VVSW A+I G S+N
Sbjct: 74 QIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNG 133
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+ DA+++++QML+ G P Q T ++ +C + G+ +H IKS +N
Sbjct: 134 YDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKN 193
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH---- 231
AL +MY K + A +F I K SW +MI A+ + G EA+ F +M
Sbjct: 194 ALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEV 253
Query: 232 ------------------------GAYQPNEFIFGSV---FSACSNF--ARILFNEIDSP 262
+ + + S+ ++ C N A +L+N +
Sbjct: 254 NYVTIISLLSANAHLDSTHCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQR 313
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+L S A+I+G A N + F++M ++ PD + + S+L + G+ +H
Sbjct: 314 NLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIH 373
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+Y +K G ++ V N +++MY+K + +F E+G+ +SWNS+I+AC+Q +
Sbjct: 374 AYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEK-QLISWNSVISACIQVGRT 432
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
+ LF +M PD IT ++ C+++ L+ +LH Y+ + L + F+ L
Sbjct: 433 SDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETAL 492
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+YIKCG L SA ++F ++ P + +W+++I GY G AL ++ M+ G+ P+
Sbjct: 493 VDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDR 552
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
+T +GVL+AC+H GLV EG +R M ++G+IP +H +C+VDLL+RAG + EA F+
Sbjct: 553 ITFLGVLSACTHGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVK 612
Query: 563 QMACDADIVVWKSLLAS 579
M + D +W +LL S
Sbjct: 613 NMEVEPDSAIWGALLTS 629
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 189/420 (45%), Gaps = 49/420 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + + + L++EA++ + Q + + T L+SA + L S H +++
Sbjct: 224 NTMIGAYGQNGLFDEAMLVFKQMQKE-RVEVNYVTIISLLSANAHLDS------THCYVI 276
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D + ++ Y CG++E A + ++ MPQRN+VS TAMI+G ++ ++
Sbjct: 277 KTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVE 336
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ QMLQ + P SI+ + + G +HA+ +K+ + + N LI+MY+
Sbjct: 337 CFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYS 396
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
KF I ++FS + K + SW S+I+A ++G +A+ F +M +G + P+
Sbjct: 397 KFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYG-HSPDAITIA 455
Query: 243 SVFSACSNFARILFNE----------------------------------------IDSP 262
S+ + CS + F E I P
Sbjct: 456 SLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEP 515
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ-V 321
LA+WN +I+G + + A+S +SEM+++ L PD +T +L AC +++G +
Sbjct: 516 CLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYF 575
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
S G + ++ + ++ L A++ K + DS W +++ +C H +
Sbjct: 576 RSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGALLTSCCIHQE 635
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 207/484 (42%), Gaps = 58/484 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T GL+ +C + G+ +H + S D ++N + +MY KC L+ A + F+++
Sbjct: 156 TLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKCADLQAAEVLFEEI 215
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++ VSW MI QN ++A+ ++ QM + V T S++ A + L S
Sbjct: 216 FEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIISLLSANAHLDST---- 271
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
H +VIK+ + +L+ Y I A +++ + ++++ S +MI+ +++ G
Sbjct: 272 --HCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKG 329
Query: 217 YELEALCHFNEMLH--------------HGAYQP--------------------NEFIFG 242
+ F +ML HG P + +
Sbjct: 330 NMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVN 389
Query: 243 SVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
+ S S F I LF+E+ L SWN++I+ ++AM LF +MR P
Sbjct: 390 GLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSP 449
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D +T+ SLL C L G ++H+Y+++ D + A++ MY KC L +A VF
Sbjct: 450 DAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVF 509
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
K + K +WN++I+ +S M +KPD ITF V+ AC
Sbjct: 510 KSI-KEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGG-- 566
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGL------MDIYIKCGSLGSARKLFNFME-NPDVVSW 470
+V + Y + D ++ GL +D+ + G L A ME PD W
Sbjct: 567 -LVWEGKRYFRS--MREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIW 623
Query: 471 SSLI 474
+L+
Sbjct: 624 GALL 627
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 1/202 (0%)
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
T + Q+ +++ K GF+ V + A L Y K + A +F+E+ + D VSWN++I
Sbjct: 68 TKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRR-DVVSWNALI 126
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
++ + +F +ML P T ++ +C + + +H + K+GL
Sbjct: 127 CGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLD 186
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
D V N L +Y KC L +A LF + VSW+++I Y Q G DEA+ +F +M
Sbjct: 187 LDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQM 246
Query: 494 RSLGVSPNLVTLVGVLTACSHV 515
+ V N VT++ +L+A +H+
Sbjct: 247 QKERVEVNYVTIISLLSANAHL 268
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 198/613 (32%), Positives = 308/613 (50%), Gaps = 49/613 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+ +LC +AL + S + Y L C R+++ G + H
Sbjct: 63 LRALCSHGQLAQALWLLESSAEPPD----EDAYVALFRLCEWRRAVEPGLRACAHADDRH 118
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ L N +L+M + G A F KMP+R+V SW M+ G ++ ++A+ LY
Sbjct: 119 AWFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYH 178
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M+ +GV P +TF ++++C G+ +GR++HAHV++ G + NAL+ MY K
Sbjct: 179 RMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCG 238
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
++ AR VF + D SW +MIA + G L F ML H QPN SV
Sbjct: 239 DVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTML-HDEVQPNLMTITSVT 297
Query: 246 SA----------------------------CSNF------------ARILFNEIDSPDLA 265
A C++ AR +F+ +D+ D
Sbjct: 298 VASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAM 357
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
+W A+I+G + ++A+ +++ M + PD +T+ S L AC +L G+++H
Sbjct: 358 TWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELA 417
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA-CLQHNQAEE 384
GF S + V NAIL MYAK + A+ VFK + + D VSW+S+IA C H E
Sbjct: 418 ESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEK-DVVSWSSMIAGFCFNHRNFEA 476
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
L+ F MLA +KP+ +TF + ACA +L ++H ++ + G+ ++ ++ N L+D
Sbjct: 477 LY-YFRHMLA-DVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALID 534
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y+KCG G A F DVVSW+ +I G+ G GD AL F +M +G P+ VT
Sbjct: 535 LYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVT 594
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
V +L ACS G+V EG L+ M +Y I+P +H +C+VDLL+RAG + EA +FIN+M
Sbjct: 595 FVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEM 654
Query: 565 ACDADIVVWKSLL 577
D VW +LL
Sbjct: 655 PITPDAAVWGALL 667
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/517 (25%), Positives = 224/517 (43%), Gaps = 48/517 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N V K L +EAL D +RP T+ ++ +C + ++GR+VH H
Sbjct: 158 NVMVGGYGKSGLLDEAL---DLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAH 214
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+L +V + N ++ MY KCG + AR FD M + +SW AMIAG +N + N
Sbjct: 215 VLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAG 274
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
++L++ ML V P T S+ A L V +++H +K + N+LI M
Sbjct: 275 LELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQM 334
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL------------------ 222
Y + AR VFS + +D +W +MI+ + K G+ +AL
Sbjct: 335 YASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITI 394
Query: 223 ----------------CHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS 261
+E+ + + ++ + RI +F +
Sbjct: 395 ASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHE 454
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
D+ SW+++IAG + EA+ F M ++ P+ +T + L AC L G ++
Sbjct: 455 KDVVSWSSMIAGFCFNHRNFEALYYFRHML-ADVKPNSVTFIAALAACAATGALRSGKEI 513
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H+++++ G + + NA++ +Y KC A F G D VSWN +IA + H
Sbjct: 514 HAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAK-DVVSWNIMIAGFVAHGH 572
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL-HCYITKTGLAFDVFVMN 440
+ F++M+ PD +TF ++ AC++ + +L H K + ++
Sbjct: 573 GDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYA 632
Query: 441 GLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILG 476
++D+ + G L A N M PD W +L+ G
Sbjct: 633 CMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNG 669
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 183/568 (32%), Positives = 288/568 (50%), Gaps = 61/568 (10%)
Query: 46 SSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWT 105
S+ SL R+ H HIL + D L +L+ Y DA + D +P+ NV S++
Sbjct: 24 STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83
Query: 106 AMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS 165
+I S+ +Q + A+ + QML G+MP S +KAC+GL ++ RQ+H S
Sbjct: 84 TLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVS 143
Query: 166 EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHF 225
S Q++L+ MY K ++I DA VF + DV SW +++AA+++ G EA F
Sbjct: 144 GFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLF 203
Query: 226 NEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
+EM G P+L SWN +IAG +EA+
Sbjct: 204 SEMGDSGV---------------------------QPNLISWNGMIAGFNHSGLYSEAVL 236
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
+F +M R PDG T+ S+L A L G+ +H Y+IK G S+ V +A++ MY
Sbjct: 237 MFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYG 296
Query: 346 KCSVL-----------------CNA--------------LLVFKEL---GKNADSVSWNS 371
KCS CNA L +F++L G + VSW S
Sbjct: 297 KCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTS 356
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+IA C Q+ + E LF M + +KP+ +T ++ AC +A+L HC+ + G
Sbjct: 357 MIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRG 416
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
++ DV+V + L+D+Y KCG + ++R F+ + ++V W+++I GYA G EA+++F
Sbjct: 417 ISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFD 476
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
M+ G P++++ VL+ACS GL EEG + + M ++YGI EH +C+V LL+RA
Sbjct: 477 LMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRA 536
Query: 552 GCVHEAEDFINQMACDADIVVWKSLLAS 579
G + +A I +M + D VW +LL+S
Sbjct: 537 GKLEQAYAMIRRMPVNPDACVWGALLSS 564
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 195/476 (40%), Gaps = 125/476 (26%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
R+ PS + AC+ L +L+ R+VH +S D +Q+ +++MY KC + DA
Sbjct: 115 RVLPSA----VKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHR 170
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQF-------------- 137
FD+M + +VVSW+A++A ++ ++A +L+ +M SGV P
Sbjct: 171 VFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGL 230
Query: 138 ---------------------TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA 176
T S++ A L + +G +H +VIK S +A
Sbjct: 231 YSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSA 290
Query: 177 LIAMYTK----------FDRILDARNVFS------GIARK-------------------- 200
LI MY K FD+ +D +V S G++R
Sbjct: 291 LIDMYGKCSCTSEMSQVFDQ-MDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMEL 349
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA-------- 252
+V SW SMIA S+ G ++EAL F EM G +PN + AC N A
Sbjct: 350 NVVSWTSMIACCSQNGRDMEALELFREMQIAGV-KPNSVTIPCLLPACGNIAALMHGKAA 408
Query: 253 --------------------------------RILFNEIDSPDLASWNALIAGVASHSNA 280
RI F+ I + +L WNA+IAG A H A
Sbjct: 409 HCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKA 468
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACI-GRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
EAM +F M+ PD ++ +L AC LT +S K G ++ V
Sbjct: 469 KEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYAC 528
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRL 388
++T+ ++ L A + + + N D+ W +++++C HN AE+LF L
Sbjct: 529 MVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFEL 584
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 190/602 (31%), Positives = 301/602 (50%), Gaps = 58/602 (9%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQP-DVVLQNHILNMYGKCGSLEDA 89
+R +TYA L+ C+ ++L GRK+H + P +++L NHI++MY C S DA
Sbjct: 39 VRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDA 98
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
+ FD + QRN+ SWT ++A + + Q + ++ +M Q GV P TF + + +C
Sbjct: 99 KAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDP 158
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR-KDVTSWGSM 208
S+ G ++H V+ S NAL+ MY K + A+ VF+ + R ++V SW M
Sbjct: 159 ESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIM 218
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------ 250
A + G EAL HF ML G + + ++ SACS+
Sbjct: 219 AGAHALHGNVWEALRHFRFMLLLG-IKATKSAMVTILSACSSPALVQDGRLIHSCIALSG 277
Query: 251 ----------------------FARILFNEIDSP--DLASWNALIAGVASHSNANEAMSL 286
AR +F+ +D D+ SWN +++ + +A+ L
Sbjct: 278 FESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQL 337
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
+ M +L D +T SLL AC + G +H I+ + NV V NA+++MYAK
Sbjct: 338 YQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAK 394
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML-------ASQIKP 399
C A VF ++ + + +SW +II+A ++ E LF +ML + ++KP
Sbjct: 395 CGSHTEARAVFDKMEQRS-IISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKP 453
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D + F ++ ACA +++LE + GL+ D V ++++Y KCG + R++F
Sbjct: 454 DALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIF 513
Query: 460 NFM-ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
+ + PDV W+++I YAQFG EALKLF RM GV P+ + V +L ACSH GL
Sbjct: 514 DGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLE 573
Query: 519 EEGLHLYRIMENEY-GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
++G + M EY + T +H CV DLL R G + EAE+F+ ++ D V W SLL
Sbjct: 574 DQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLL 633
Query: 578 AS 579
A+
Sbjct: 634 AA 635
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/512 (23%), Positives = 231/512 (45%), Gaps = 55/512 (10%)
Query: 117 ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE-HGSHLIAQN 175
+D + + + V T+ +++ C+ ++ GR++H+ +K +LI N
Sbjct: 24 RSDIASAVLDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGN 83
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
+++MY D DA+ F + ++++ SW ++AAF+ G E L M G +
Sbjct: 84 HIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGV-R 142
Query: 236 PNEFIFGSVFSACSN----------------------------------------FARIL 255
P+ F + +C + A+ +
Sbjct: 143 PDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRV 202
Query: 256 FNEID-SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
F +++ + ++ SW+ + A H N EA+ F M + + ++L AC
Sbjct: 203 FAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPAL 262
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN-ADSVSWNSII 373
+ G +HS I GF+S + V NA++TMY +C + A VF + + D VSWN ++
Sbjct: 263 VQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIML 322
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
+A + +++ ++ +L+ RM Q++ D +T+ ++ AC+ + + LH I L
Sbjct: 323 SAYVHNDRGKDAIQLYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELE 379
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
+V V N L+ +Y KCGS AR +F+ ME ++SW+++I Y + EA LF +M
Sbjct: 380 KNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQM 439
Query: 494 RSL-------GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
L V P+ + V +L AC+ V +E+G + G+ + + VV+
Sbjct: 440 LELEKNGSSQRVKPDALAFVTILNACADVSALEQG-KMVSEQAASCGLSSDKAVGTAVVN 498
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
L + G + E + + D+ +W +++A
Sbjct: 499 LYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIA 530
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 199/423 (47%), Gaps = 69/423 (16%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+ S ++SACSS +Q GR +H I LS + ++++ N ++ MYG+CG++E+AR
Sbjct: 243 IKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEAR 302
Query: 91 MGFDKMPQ--RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
FD M + R+VVSW M++ N + DAI+LY +M + + T+ S++ ACS
Sbjct: 303 KVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM---QLRADKVTYVSLLSACSS 359
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
V LGR LH ++ E ++I NAL++MY K +AR VF + ++ + SW ++
Sbjct: 360 AEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTI 419
Query: 209 IAAFSKLGYELEALCH-FNEMLH---HGAYQ---PNEFIFGSVFSACSNFA--------- 252
I+A+ + EA CH F +ML +G+ Q P+ F ++ +AC++ +
Sbjct: 420 ISAYVRRRLVAEA-CHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVS 478
Query: 253 -------------------------------RILFNEIDS-PDLASWNALIAGVASHSNA 280
R +F+ + S PD+ WNA+IA A +
Sbjct: 479 EQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQS 538
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD-----SNVP 335
+EA+ LF M + PD + S+L AC QG SY M + +
Sbjct: 539 HEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQG---KSYFTSMTTEYRNVTRTIQ 595
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRL 388
+ + + L A ++L D+V+W S++AAC H A +L RL
Sbjct: 596 HFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRL 655
Query: 389 FSR 391
R
Sbjct: 656 EPR 658
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 174/560 (31%), Positives = 286/560 (51%), Gaps = 67/560 (11%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ 113
R++ D I ++ + N +L+MY K G L DAR+ F +MP+R+ VSWT M+ G ++
Sbjct: 83 ARRLFDDIPYAR--RNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNR 140
Query: 114 NYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA 173
+ DA+K ++ M+ G+ P QF +++ +C+ + +GR++H+ VIK S +
Sbjct: 141 AGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPV 200
Query: 174 QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA 233
N+++ MY K AR VF + + +SW +M++ ++ H G
Sbjct: 201 ANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYT----------------HQGR 244
Query: 234 YQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RD 292
+ A +F ++ + SWNA+IAG + + A+ FS M
Sbjct: 245 M---------------DLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTA 289
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ PD TV S+L AC L G Q+HSYI++ G + + NA+++ YAK +
Sbjct: 290 SSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVET 349
Query: 353 ALLV--------------------FKELG------------KNADSVSWNSIIAACLQHN 380
A + + +LG N D ++W ++I Q+
Sbjct: 350 ARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNG 409
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
Q +E LF M+ S +P+ T V+ ACA +A L Q+HC ++ V V N
Sbjct: 410 QNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSN 469
Query: 441 GLMDIYIKCGSLGSARKLFNFM-ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
++ +Y + GS+ AR++F+ + + V+W+S+I+ AQ G G++A+ LF M +GV
Sbjct: 470 AIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVK 529
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
P+ VT +GV +AC+H G +++G Y M NE+GI+P H +C+VDLLARAG + EA +
Sbjct: 530 PDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHE 589
Query: 560 FINQMACDADIVVWKSLLAS 579
FI +M D VVW SLLA+
Sbjct: 590 FIQRMPVAPDTVVWGSLLAA 609
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 220/499 (44%), Gaps = 110/499 (22%)
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR----ILDARNVFSGI--ARKDVTSWGSM 208
GR +HAH +K+ N L++ Y + +AR +F I AR++ +W S+
Sbjct: 44 GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWN 268
++ ++K G + AR++F ++ D SW
Sbjct: 104 LSMYAKSGRLAD-------------------------------ARVVFAQMPERDAVSWT 132
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
++ G+ +A+ F +M L P + ++L +C G +VHS++IK+
Sbjct: 133 VMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKL 192
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS---------------------- 366
G S VPV N++L MY KC A VF+ + ++S
Sbjct: 193 GLSSCVPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMF 252
Query: 367 --------VSWNSIIAACLQHNQAEELFRLFSRML-ASQIKPDHITFNDVMGACAKMASL 417
VSWN+IIA Q+ + + FSRML AS ++PD T V+ ACA + L
Sbjct: 253 ENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRML 312
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL------------------- 458
+M Q+H YI +TG+ + +MN L+ Y K GS+ +AR++
Sbjct: 313 KMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLE 372
Query: 459 --------------FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
F+ M N DV++W+++I+GY Q G DEA++LF M G PN T
Sbjct: 373 GYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHT 432
Query: 505 LVGVLTACSHVGLVEEGLHLY----RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
L VL+AC+ + + G ++ R ++ + + + ++ + AR+G V A
Sbjct: 433 LAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSV-----SNAIITVYARSGSVPLARRV 487
Query: 561 INQMACDADIVVWKSLLAS 579
+Q+ + V W S++ +
Sbjct: 488 FDQICWRKETVTWTSMIVA 506
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 211/495 (42%), Gaps = 122/495 (24%)
Query: 35 PSTY--AGLISACSSLRSLQLGRKVHDHIL---LSKCQPDVVLQNHILNMYGKCGSLEDA 89
PS + ++S+C++ + +GRKVH ++ LS C P + N +L MYGKCG E A
Sbjct: 161 PSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVP---VANSVLYMYGKCGDAETA 217
Query: 90 RMGFDKMP-------------------------------QRNVVSWTAMIAGCSQNYQEN 118
R F++M +R++VSW A+IAG +QN ++
Sbjct: 218 RAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDD 277
Query: 119 DAIKLYIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
A+K + +ML + M P +FT S++ AC+ L + +G+Q+H++++++ NAL
Sbjct: 278 MALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNAL 337
Query: 178 IAMYTK------FDRILD---------------------------ARNVFSGIARKDVTS 204
I+ Y K RI+D AR VF + +DV +
Sbjct: 338 ISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIA 397
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-------------- 250
W +MI + + G EA+ F M+ G +PN +V SAC++
Sbjct: 398 WTAMIVGYEQNGQNDEAMELFRSMIRSGP-EPNSHTLAAVLSACASLAYLGYGKQIHCRA 456
Query: 251 --------------------------FARILFNEI-DSPDLASWNALIAGVASHSNANEA 283
AR +F++I + +W ++I +A H +A
Sbjct: 457 IRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQA 516
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAILT 342
+ LF EM + PD +T + AC + +G + + ++ + G + ++
Sbjct: 517 IVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVD 576
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD-- 400
+ A+ +L A + + D+V W S++AAC A +L L + L S I PD
Sbjct: 577 LLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNA-DLAELAAEKLLS-IDPDNS 634
Query: 401 --HITFNDVMGACAK 413
+ +V AC +
Sbjct: 635 GAYSALANVYSACGR 649
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 178/381 (46%), Gaps = 51/381 (13%)
Query: 24 FSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYG 81
FS+ T + P T ++SAC++LR L++G+++H +IL + + N +++ Y
Sbjct: 283 FSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYA 342
Query: 82 KCGSLEDAR-------------------------MG--------FDKMPQRNVVSWTAMI 108
K GS+E AR +G FD M R+V++WTAMI
Sbjct: 343 KSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMI 402
Query: 109 AGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG 168
G QN Q ++A++L+ M++SG P T +++ AC+ L + G+Q+H I+S
Sbjct: 403 VGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQE 462
Query: 169 SHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNE 227
+ NA+I +Y + + AR VF I RK+ +W SMI A ++ G +A+ F E
Sbjct: 463 QSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEE 522
Query: 228 MLHHGAYQPNEFIFGSVFSACSN----------FARILFNEIDSPDLASWNALIAGVASH 277
ML G +P+ + VFSAC++ + ++L P+++ + ++ +A
Sbjct: 523 MLRVGV-KPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARA 581
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
EA M + PD + SLL AC R ++ + D N
Sbjct: 582 GLLTEAHEFIQRM---PVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPD-NSGAY 637
Query: 338 NAILTMYAKCSVLCNALLVFK 358
+A+ +Y+ C +A ++K
Sbjct: 638 SALANVYSACGRWNDAARIWK 658
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 173/585 (29%), Positives = 309/585 (52%), Gaps = 45/585 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK- 95
T+ ++ AC + + +LG ++H + V + N ++ MY KCG L AR+ FD
Sbjct: 150 TFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSG 209
Query: 96 -MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
M + + VSW ++I+ + +A+ L+ +M + GV +TF S ++AC G + +
Sbjct: 210 LMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKI 269
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
GR +HA ++KS H + + NALIAMY ++ DA VF + KD SW ++++ +
Sbjct: 270 GRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQ 329
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL------------------- 255
+A+ HF +M G +P++ ++ +A A +L
Sbjct: 330 NDMYSDAINHFQDMQDSGQ-KPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMH 388
Query: 256 ---------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
F + DL SW +IAG A + +A++L +++ +
Sbjct: 389 IGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEK 448
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ D + + S+L AC G + ++H Y++K G +++ + NAI+ +Y + +++ A
Sbjct: 449 MDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYAR 507
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
VF+ + + D VSW S+I C+ + A E LF+ ++ + I+PD IT V+ A A +
Sbjct: 508 HVFESIN-SKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAAL 566
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+SL+ ++H ++ + G + + N L+D+Y +CG++ +AR +FN+++ D++ W+S+I
Sbjct: 567 SSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMI 626
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
GCG +A+ LF++M V P+ +T + +L ACSH GLV EG + IM+NEY +
Sbjct: 627 NANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKL 686
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P EH +C+VDLLAR+ + EA F+ M + VW +LL +
Sbjct: 687 EPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGA 731
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 176/587 (29%), Positives = 294/587 (50%), Gaps = 56/587 (9%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPD-VVLQNHILNMYGKCGSLEDARMGFDKM 96
Y+ + C+S ++L G+++H H L ++ D V L ++MYGKCGS DA FDKM
Sbjct: 49 YSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKM 108
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R + +W AMI C + +AI+LY +M GV FTF ++KAC LG
Sbjct: 109 SERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGC 168
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF-SGIARK-DVTSWGSMIAAFSK 214
++H +K +G + NALIAMY K + AR +F SG+ K D SW S+I+A
Sbjct: 169 EIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVG 228
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--NFARI------------------ 254
G LEAL F M G + N + F S AC F +I
Sbjct: 229 EGESLEALSLFRRMQEVGV-ESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVY 287
Query: 255 --------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+F + D SWN L++G+ + ++A++ F +M+D
Sbjct: 288 VSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSG 347
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
PD ++V +++ A L GM+VH+Y IK G DSN+ + N+++ MY KC +
Sbjct: 348 QKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMG 407
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
F E D +SW +IIA Q+ + L ++ ++ D + ++ AC+ +
Sbjct: 408 SAF-EYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGL 466
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
S +++ ++H Y+ K GLA D+ + N ++++Y + + AR +F + + D+VSW+S+I
Sbjct: 467 KSEKLIKEIHGYVLKGGLA-DILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMI 525
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEY 532
G EAL+LF + + P+L+TLV VL A + + +++G +H + I + +
Sbjct: 526 TCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFF 585
Query: 533 --GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
G+I + +VD+ AR G + A + N + D+++W S++
Sbjct: 586 LEGLI-----ANSLVDMYARCGTMENARNIFNYVK-QRDLILWTSMI 626
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 237/506 (46%), Gaps = 55/506 (10%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
E+L A + + + +TY + AC +++GR +H IL S DV + N
Sbjct: 231 ESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSN 290
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
++ MY CG +EDA F M ++ VSW +++G QN +DAI + M SG P
Sbjct: 291 ALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKP 350
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
Q + ++I A ++ G ++HA+ IK S++ N+LI MY K + + F
Sbjct: 351 DQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAF 410
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM-LHHGAYQPNEFIFGSVFSACS---- 249
+ KD+ SW ++IA +++ L+AL ++ L P + GS+ ACS
Sbjct: 411 EYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDP--MMIGSILLACSGLKS 468
Query: 250 -----------------------------------NFARILFNEIDSPDLASWNALIAGV 274
++AR +F I+S D+ SW ++I
Sbjct: 469 EKLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCC 528
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+ A EA+ LF+ + + + PD +T+ S+L A +L +G ++H ++I+ GF
Sbjct: 529 VHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEG 588
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
+ N+++ MYA+C + NA +F + K D + W S+I A H ++ LFS+M
Sbjct: 589 LIANSLVDMYARCGTMENARNIFNYV-KQRDLILWTSMINANGMHGCGKDAIDLFSKMTD 647
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG--LMDIYIKCGSL 452
+ PDHITF ++ AC+ + L + + H I K + + + L+D+ + SL
Sbjct: 648 ENVLPDHITFLALLYACSH-SGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSL 706
Query: 453 GSARKLFNFMEN----PDVVSWSSLI 474
A ++F+ N P W +L+
Sbjct: 707 EEA---YHFVRNMPIEPSAEVWCALL 729
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 203/432 (46%), Gaps = 47/432 (10%)
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDARN 192
P Q + ++ C+ ++ G+QLHAH +K++ + + + MY K DA
Sbjct: 44 PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVK 103
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF- 251
VF ++ + + +W +MI A G +EA+ + EM G + F F V AC F
Sbjct: 104 VFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGV-SLDAFTFPCVLKACGAFK 162
Query: 252 ---------------------------------------ARILFNE--IDSPDLASWNAL 270
AR+LF+ ++ D SWN++
Sbjct: 163 ERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSI 222
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I+ + EA+SLF M++ + + T S L AC G + G +H+ I+K
Sbjct: 223 ISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNH 282
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
++V V NA++ MYA C + +A VFK + D VSWN++++ +Q++ + F
Sbjct: 283 FTDVYVSNALIAMYANCGQMEDAERVFKSM-LFKDCVSWNTLLSGMVQNDMYSDAINHFQ 341
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
M S KPD ++ +++ A + A+L ++H Y K G+ ++ + N L+D+Y KC
Sbjct: 342 DMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCC 401
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ F +M D++SW+++I GYAQ C +AL L +++ + + + + +L
Sbjct: 402 CVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILL 461
Query: 511 ACSHVGLVEEGL 522
ACS GL E L
Sbjct: 462 ACS--GLKSEKL 471
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 130/275 (47%), Gaps = 10/275 (3%)
Query: 309 CIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
C L QG Q+H++ +K + +V + + MY KC +A+ VF ++ +
Sbjct: 56 CASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERT-IF 114
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
+WN++I AC+ + E L+ M + D TF V+ AC + ++H
Sbjct: 115 TWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVA 174
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN--FMENPDVVSWSSLILGYAQFGCGDE 485
K G VFV N L+ +Y KCG LG AR LF+ ME D VSW+S+I + G E
Sbjct: 175 VKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLE 234
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE--EGLHLYRIMENEYGIIPTREHCSC 543
AL LF RM+ +GV N T V L AC ++ G+H + N + + +
Sbjct: 235 ALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVS---NA 291
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++ + A G + +AE M D V W +LL+
Sbjct: 292 LIAMYANCGQMEDAERVFKSMLF-KDCVSWNTLLS 325
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 183/591 (30%), Positives = 307/591 (51%), Gaps = 54/591 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHIL----LSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
++ L+ + +SL+ G+ +H HI+ LS C L N+++ Y KCG L A++
Sbjct: 9 SFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCN---YLANNLIKFYAKCGHLHGAKLV 65
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQE--NDAIKLYIQMLQSGVMPGQFTFGSIIKACS-GL 149
F+ + +NVVS+ +I G S N + N ++L+ +M+ + ++P TF + A + L
Sbjct: 66 FENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNL 125
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G RQ+H IK+ + ++L+ Y K + +AR +F + +++ SW +MI
Sbjct: 126 GCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMI 185
Query: 210 AAFSKLGYELEALCHFNEM-LHHGAYQPNEFIFGSVFSA--------------------- 247
+ ++ EAL F M L G NEF+F SV SA
Sbjct: 186 SGYASKQMAKEALGVFGLMRLVEG--NLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNG 243
Query: 248 -----------------CSN--FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
C N ++ +LF + +W+ALI G + ++++A+ LFS
Sbjct: 244 VLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFS 303
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+M +P T+ +L AC + +G Q H Y++K G+++ + A++ MYAK
Sbjct: 304 KMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFG 363
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+A F L D V W SIIA +Q+ + EE ++ RM +I P+ +T V+
Sbjct: 364 FTGDARKGFDFL-LEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVL 422
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
AC+ +A+LE Q+H K GL ++ + + L +Y KCGSL +F M D+V
Sbjct: 423 KACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIV 482
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
SW+++I G +Q G G EAL+LF MR G P+ +T V VL+ACSH+G+V+ G + +M
Sbjct: 483 SWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMM 542
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+E+ ++P EH +C+VD+L+RAG ++EA++FI D + +W+ LL +
Sbjct: 543 FDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPA 593
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/491 (29%), Positives = 241/491 (49%), Gaps = 52/491 (10%)
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGS--HLIAQNALIAMYTKFDRILDAR 191
P +F +++ + S+ G+ LHAH+IK + S + +A N LI Y K + A+
Sbjct: 5 PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANN-LIKFYAKCGHLHGAK 63
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELE--ALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
VF + K+V S+ +I S G + L F M+ + P+ F VF+A +
Sbjct: 64 LVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNIL-PDAHTFPGVFTAAA 122
Query: 250 -----NF------------------------------------ARILFNEIDSPDLASWN 268
NF AR LF+ + +L SW
Sbjct: 123 LNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWT 182
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
+I+G AS A EA+ +F MR E + S+L A + + G QVH ++K
Sbjct: 183 TMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKN 242
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
G V V NA++TMYAKC L +L++F E+ + ++++W+++I Q + + +L
Sbjct: 243 GVLEFVSVLNALVTMYAKCGNLNYSLMLF-EMCSDKNAITWSALITGYSQAGDSHKALKL 301
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
FS+M + P T V+ AC+ +A++E Q H Y+ K+G ++ L+D+Y K
Sbjct: 302 FSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAK 361
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
G G ARK F+F+ PD+V W+S+I GY Q G +EAL ++ RM+ + PN +T+ V
Sbjct: 362 FGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASV 421
Query: 509 LTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
L ACS++ +E+G ++ R + +YG+ P S + + A+ G + E +M
Sbjct: 422 LKACSNLAALEQGKQIHARTI--KYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRM-LQ 478
Query: 568 ADIVVWKSLLA 578
DIV W ++++
Sbjct: 479 RDIVSWNAMIS 489
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 142/486 (29%), Positives = 228/486 (46%), Gaps = 74/486 (15%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLG-----RKVHDHILLSKCQPDVVLQNHILNMYGKCG 84
NI T+ G+ +A + L LG R+VH + + DV + + ++N Y K G
Sbjct: 106 NILPDAHTFPGVFTAAA----LNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVG 161
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
+ +AR FD+MP+RN+VSWT MI+G + +A+ ++ M +F F S++
Sbjct: 162 CVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLS 221
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
A V G+Q+H V+K+ + NAL+ MY K + + +F + K+ +
Sbjct: 222 ALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAIT 281
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------- 251
W ++I +S+ G +AL F++M H+ + P+EF V ACS+
Sbjct: 282 WSALITGYSQAGDSHKALKLFSKM-HYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYL 340
Query: 252 ---------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
AR F+ + PDL W ++IAG + EA+
Sbjct: 341 LKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEAL 400
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
S++ M+ R++LP+ LT+ S+L AC L QG Q+H+ IK G + + +A+ TMY
Sbjct: 401 SMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMY 460
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
AKC L +L+F+ + + D VSWN++I+ Q+ E LF M KPDHITF
Sbjct: 461 AKCGSLEEGVLIFRRMLQR-DIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITF 519
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLA-----FDVFVMNG-------LMDIYIKCGSL 452
V+ AC+ M I K G A FD F + ++D+ + G L
Sbjct: 520 VTVLSACSHMG-----------IVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKL 568
Query: 453 GSARKL 458
A++
Sbjct: 569 NEAKEF 574
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 155/489 (31%), Positives = 265/489 (54%), Gaps = 34/489 (6%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F+ + + N++ W M G + N A+KLY+ M+ G++P ++F ++K+C+ ++
Sbjct: 22 FETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKAL 81
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+Q+H HV+K + + +LI+MY + R+ DA VF + + V S+ ++I +
Sbjct: 82 IEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGY 141
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
+ GY N AR LF+EI D+ SWNA+I+
Sbjct: 142 ASRGY-------------------------------INNARKLFDEISVKDVVSWNAMIS 170
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G N EA+ L+ +M + PD T+ +++ AC ++ G Q+HS+I GF S
Sbjct: 171 GYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGS 230
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N+ + N ++ +Y+KC + A +F+ L K D +SWN++I N +E LF M
Sbjct: 231 NIKIVNVLIDLYSKCGEVETACGLFQGLAKK-DVISWNTLIGGHTHMNLYKEALLLFQEM 289
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFDVFVMNGLMDIYIKCG 450
L S P+ +T V+ ACA + ++++ +H YI K G+ ++ L+D+Y KCG
Sbjct: 290 LRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCG 349
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ +A+++F+ M + SW+++I G+A G + A LF++MR G+ P+ +T VG+L+
Sbjct: 350 DIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLS 409
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSH G+++ G H++R M +Y I P EH C++DLL G EA++ I M + D
Sbjct: 410 ACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDG 469
Query: 571 VVWKSLLAS 579
V+W SLL +
Sbjct: 470 VIWCSLLKA 478
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 177/347 (51%), Gaps = 33/347 (9%)
Query: 250 NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
++A +F I P+L WN + G A +S++ A+ L+ M LLP+ + LL +C
Sbjct: 16 SYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSC 75
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN------ 363
L +G Q+H +++K+G+D ++ V ++++MYA+ L +A VF
Sbjct: 76 AKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYT 135
Query: 364 ------------------------ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
D VSWN++I+ ++ +E L+ M+ + +KP
Sbjct: 136 ALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKP 195
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D T V+ ACA+ S+E+ QLH +I G ++ ++N L+D+Y KCG + +A LF
Sbjct: 196 DESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLF 255
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ DV+SW++LI G+ EAL LF M G SPN VT++ VL AC+H+G ++
Sbjct: 256 QGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAID 315
Query: 520 EG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
G +H+Y I + G+ + ++D+ A+ G + A+ + M
Sbjct: 316 IGRWIHVY-INKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM 361
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 191/425 (44%), Gaps = 77/425 (18%)
Query: 35 PSTYAG--LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
P++Y+ L+ +C+ ++L G+++H H+L D+ + +++MY + G LEDA
Sbjct: 63 PNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKV 122
Query: 93 FDKMPQRNVVSWTAMIAG-CSQNYQEN------------------------------DAI 121
FD+ R+VVS+TA+I G S+ Y N +A+
Sbjct: 123 FDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEAL 182
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+LY M+++ V P + T +++ AC+ GS+ LGRQLH+ + GS++ N LI +Y
Sbjct: 183 ELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLY 242
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
+K + A +F G+A+KDV SW ++I + + EAL F EML G PN+
Sbjct: 243 SKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGE-SPNDVTM 301
Query: 242 GSVFSACSNF------------------------------------------ARILFNEI 259
SV AC++ A+ +F+ +
Sbjct: 302 LSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM 361
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
+ L+SWNA+I G A H AN A LFS+MR + PD +T LL AC L G
Sbjct: 362 LTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGR 421
Query: 320 QV-HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
+ S + ++ + C + A + + + D V W S++ AC
Sbjct: 422 HIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKM 481
Query: 379 HNQAE 383
HN E
Sbjct: 482 HNNVE 486
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 156/309 (50%), Gaps = 21/309 (6%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
+ EAL Y TN++ ST ++SAC+ S++LGR++H I ++ + N
Sbjct: 178 FKEALELYK-DMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVN 236
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
++++Y KCG +E A F + +++V+SW +I G + +A+ L+ +ML+SG P
Sbjct: 237 VLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESP 296
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG----SHLIAQNALIAMYTKFDRILDA 190
T S++ AC+ LG++ +GR +H ++ K G S L+ +LI MY K I A
Sbjct: 297 NDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLT--SLIDMYAKCGDIEAA 354
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS- 249
+ VF + + ++SW +MI F+ G A F++M +G P++ F + SACS
Sbjct: 355 KQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGI-DPDDITFVGLLSACSH 413
Query: 250 ----NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
+ R +F + +P L + +I + EA + +R + PDG+
Sbjct: 414 SGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEM---IRTMPMEPDGV 470
Query: 301 TVHSLLCAC 309
SLL AC
Sbjct: 471 IWCSLLKAC 479
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 7/160 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N + NLY EAL+ + Q P+ T ++ AC+ L ++ +GR +H +
Sbjct: 267 NTLIGGHTHMNLYKEALLLF---QEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVY 323
Query: 61 I--LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
I L L +++MY KCG +E A+ FD M R++ SW AMI G + + + N
Sbjct: 324 INKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKAN 383
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
A L+ +M ++G+ P TF ++ ACS G + LGR +
Sbjct: 384 AAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHI 423
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 186/611 (30%), Positives = 314/611 (51%), Gaps = 53/611 (8%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
+L+ E L A D + +N T + AC+ + ++LG VH L + D +
Sbjct: 180 SLFLELLSATDLAPDNF-------TLPCVAKACAGVADVELGEAVHALALKAGGFSDAFV 232
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML---Q 129
N ++ MYGKCG +E A F+ M RN+VSW +++ CS+N + ++ ++L +
Sbjct: 233 GNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEE 292
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD 189
G++P T ++I AC+ +G V +G +H K + N+L+ MY+K + +
Sbjct: 293 EGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGE 352
Query: 190 ARNVFSGIARKDVTSWGSMIAAFSKLG-----YEL------EALCHFNEM---------- 228
AR +F K+V SW ++I +SK G +EL E NE+
Sbjct: 353 ARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACS 412
Query: 229 ---------------LHHGAYQPNEFI---FGSVFSACSNF--ARILFNEIDSPDLASWN 268
HG + +E + F + ++ CS+ A +F ++ ++SWN
Sbjct: 413 GEHQLLSLKEIHGYAFRHG-FLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWN 471
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
ALI A + +++ LF M D + PD T+ SLL AC L G ++H ++++
Sbjct: 472 ALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRN 531
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
G + + + +++++Y +CS + L+F ++ +N V WN +I Q+ E
Sbjct: 532 GLELDEFIGISLMSLYIQCSSMLLGKLIFDKM-ENKSLVCWNVMITGFSQNELPCEALDT 590
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
F +ML+ IKP I V+GAC+++++L + ++H + K L+ D FV L+D+Y K
Sbjct: 591 FRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAK 650
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
CG + ++ +F+ + D W+ +I GY G G +A++LF M++ G P+ T +GV
Sbjct: 651 CGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGV 710
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
L AC+H GLV EGL M+N YG+ P EH +CVVD+L RAG + EA +N+M +
Sbjct: 711 LIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEP 770
Query: 569 DIVVWKSLLAS 579
D +W SLL+S
Sbjct: 771 DSGIWSSLLSS 781
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 180/621 (28%), Positives = 299/621 (48%), Gaps = 55/621 (8%)
Query: 8 SLCKQNLYNEAL-VAYDFSQNNT--NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLS 64
+LC N+AL + + +QN T + I L+ AC +++ +GRKVH + S
Sbjct: 62 NLCDSGNLNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVSAS 121
Query: 65 -KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
K + DVVL I+ MY CGS D+R FD ++++ + A+++G S+N DAI L
Sbjct: 122 HKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISL 181
Query: 124 YIQMLQ-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++++L + + P FT + KAC+G+ V LG +HA +K+ S NALIAMY
Sbjct: 182 FLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYG 241
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML--HHGAYQPNEFI 240
K + A VF + +++ SW S++ A S+ G E F +L P+
Sbjct: 242 KCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVAT 301
Query: 241 FGSVFSACSNF----------------------------------------ARILFNEID 260
+V AC+ AR LF+
Sbjct: 302 MVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNG 361
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGRLTLYQGM 319
++ SWN +I G + + L EM R+ ++ + +TV ++L AC G L
Sbjct: 362 GKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLK 421
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV-SWNSIIAACLQ 378
++H Y + GF + V NA + YAKCS L A VF G +V SWN++I A Q
Sbjct: 422 EIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVF--CGMEGKTVSSWNALIGAHAQ 479
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+ + LF M+ S + PD T ++ ACA++ L ++H ++ + GL D F+
Sbjct: 480 NGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFI 539
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
LM +YI+C S+ + +F+ MEN +V W+ +I G++Q EAL F +M S G+
Sbjct: 540 GISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGI 599
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC-VVDLLARAGCVHEA 557
P + + GVL ACS V + G ++ + + +C ++D+ A+ GC+ ++
Sbjct: 600 KPQEIAVTGVLGACSQVSALRLGKEVHSFALKAH--LSEDAFVTCALIDMYAKCGCMEQS 657
Query: 558 EDFINQMACDADIVVWKSLLA 578
++ +++ + D VW ++A
Sbjct: 658 QNIFDRVN-EKDEAVWNVIIA 677
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 174/402 (43%), Gaps = 48/402 (11%)
Query: 26 QNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS 85
Q +R+ T ++ ACS L +++H + D ++ N + Y KC S
Sbjct: 392 QREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSS 451
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
L+ A F M + V SW A+I +QN ++ L++ M+ SG+ P +FT GS++ A
Sbjct: 452 LDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLA 511
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
C+ L + G+++H ++++ +L+++Y + +L + +F + K + W
Sbjct: 512 CARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCW 571
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------- 254
MI FS+ EAL F +ML G +P E V ACS + +
Sbjct: 572 NVMITGFSQNELPCEALDTFRQMLS-GGIKPQEIAVTGVLGACSQVSALRLGKEVHSFAL 630
Query: 255 -----------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMS 285
+F+ ++ D A WN +IAG H + +A+
Sbjct: 631 KAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIE 690
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM----GFDSNVPVCNAIL 341
LF M+++ PD T +L AC + +G++ Y+ +M G + ++
Sbjct: 691 LFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLK---YLGQMQNLYGVKPKLEHYACVV 747
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
M + L AL + E+ DS W+S++++C + E
Sbjct: 748 DMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLE 789
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 149/303 (49%), Gaps = 16/303 (5%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T L+ AC+ L+ L+ G+++H +L + + D + ++++Y +C S+ ++ FDKM
Sbjct: 504 TIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKM 563
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+++V W MI G SQN +A+ + QML G+ P + ++ ACS + ++ LG+
Sbjct: 564 ENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGK 623
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H+ +K+ ALI MY K + ++N+F + KD W +IA + G
Sbjct: 624 EVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHG 683
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEID-----------SPDLA 265
+ L+A+ F E++ + +P+ F F V AC N A ++ + P L
Sbjct: 684 HGLKAIELF-ELMQNKGGRPDSFTFLGVLIAC-NHAGLVTEGLKYLGQMQNLYGVKPKLE 741
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
+ ++ + EA+ L +EM D PD SLL +C L G +V +
Sbjct: 742 HYACVVDMLGRAGQLTEALKLVNEMPDE---PDSGIWSSLLSSCRNYGDLEIGEEVSKKL 798
Query: 326 IKM 328
+++
Sbjct: 799 LEL 801
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 182/617 (29%), Positives = 309/617 (50%), Gaps = 46/617 (7%)
Query: 2 SNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
+N + LC +AL + S I + + LI C + R G V +
Sbjct: 1 TNSRLLQLCLSGNLEQAL-KHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAV 59
Query: 62 LLSKCQP-DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
L S V L N +L+M+ + G + +A F +M +R++ SW ++ G ++ ++A
Sbjct: 60 LSSLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEA 119
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ LY ++L +G+ P +TF S++++C+G + GR++HAHV++ + + NALI M
Sbjct: 120 LCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITM 179
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K ++ AR +F + +D SW +MI+ + + LE L F M + P+
Sbjct: 180 YVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRM-RELSIDPDLMT 238
Query: 241 FGSVFSACS----------------------------------------NFARILFNEID 260
SV SAC A +F+ ++
Sbjct: 239 MTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGME 298
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D+ SW +I+G + ++A+ + M +PD +T+ S+L AC L GM+
Sbjct: 299 CRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMK 358
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H + G V V N+++ MY+KC + AL +F ++ + D +SW S+I +N
Sbjct: 359 LHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQI-PDKDVISWTSVINGLRINN 417
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
+ E F +M+ KP+ +T + ACA++ +L ++H + K G+ FD F+ N
Sbjct: 418 RCFEALIFFRKMILKS-KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPN 476
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
++D+Y++CG + +A FN E DV +W+ L+ GYAQ G G ++LF RM ++P
Sbjct: 477 AILDLYVRCGRMRTALNQFNLNEK-DVGAWNILLTGYAQKGKGAMVMELFKRMVESEINP 535
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ VT + +L ACS G+V EGL ++ M+ Y I P +H +CVVDLL RAG ++EA +F
Sbjct: 536 DDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEF 595
Query: 561 INQMACDADIVVWKSLL 577
I +M D +W +LL
Sbjct: 596 IERMPIKPDPAIWGALL 612
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 172/391 (43%), Gaps = 54/391 (13%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T +ISAC L +LG ++H +++ + ++ + N ++ MY G ++A F M
Sbjct: 238 TMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGM 297
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+VVSWT +I+GC N + A++ Y M +G MP + T S++ AC+ LG + +G
Sbjct: 298 ECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGM 357
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+LH ++ H +++ N+LI MY+K RI A +F I KDV SW S+I
Sbjct: 358 KLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINN 417
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL--------------------- 255
EAL F +M+ +PN S SAC+ ++
Sbjct: 418 RCFEALIFFRKMILKS--KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLP 475
Query: 256 -------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
FN ++ D+ +WN L+ G A M LF M + E+
Sbjct: 476 NAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEIN 534
Query: 297 PDGLTVHSLLCAC------IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
PD +T SLLCAC L +Q M+V+ +I N+ ++ + + L
Sbjct: 535 PDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHIT-----PNLKHYACVVDLLGRAGKL 589
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
A + + D W +++ AC H
Sbjct: 590 NEAHEFIERMPIKPDPAIWGALLNACRIHRH 620
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 182/568 (32%), Positives = 288/568 (50%), Gaps = 61/568 (10%)
Query: 46 SSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWT 105
S+ SL R+ H HIL + D L +L+ Y DA + D +P+ NV S++
Sbjct: 24 STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83
Query: 106 AMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS 165
+I S+ +Q + A+ + QML G+MP S +KAC+GL ++ RQ+H S
Sbjct: 84 TLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVS 143
Query: 166 EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHF 225
S Q++L+ MY K ++I DA VF + DV SW +++AA+++ G EA F
Sbjct: 144 GFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLF 203
Query: 226 NEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
+EM G P+L SWN +IAG +EA+
Sbjct: 204 SEMGDSGV---------------------------QPNLISWNGMIAGFNHSGLYSEAVL 236
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
+F +M R PDG T+ S+L A L G+ +H Y+IK G S+ V +A++ MY
Sbjct: 237 MFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYG 296
Query: 346 KCSVL-----------------CNALL--------------VFKEL---GKNADSVSWNS 371
KCS CNA + +F++L G + VSW S
Sbjct: 297 KCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTS 356
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+IA C Q+ + E LF M + +KP+ +T ++ AC +A+L HC+ + G
Sbjct: 357 MIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRG 416
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
++ DV+V + L+D+Y KCG + ++R F+ + ++V W+++I GYA G EA+++F
Sbjct: 417 ISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFD 476
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
M+ G P++++ VL+ACS GL EEG + + M ++YGI EH +C+V LL+RA
Sbjct: 477 LMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRA 536
Query: 552 GCVHEAEDFINQMACDADIVVWKSLLAS 579
G + +A I +M + D VW +LL+S
Sbjct: 537 GKLEQAYAMIRRMPVNPDACVWGALLSS 564
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 195/476 (40%), Gaps = 125/476 (26%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
R+ PS + AC+ L +L+ R+VH +S D +Q+ +++MY KC + DA
Sbjct: 115 RVLPSA----VKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHR 170
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQF-------------- 137
FD+M + +VVSW+A++A ++ ++A +L+ +M SGV P
Sbjct: 171 VFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGL 230
Query: 138 ---------------------TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA 176
T S++ A L + +G +H +VIK S +A
Sbjct: 231 YSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSA 290
Query: 177 LIAMYTK----------FDRILDARNVFS------GIARK-------------------- 200
LI MY K FD+ +D +V S G++R
Sbjct: 291 LIDMYGKCSCTSEMSQVFDQ-MDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMEL 349
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA-------- 252
+V SW SMIA S+ G ++EAL F EM G +PN + AC N A
Sbjct: 350 NVVSWTSMIACCSQNGRDIEALELFREMQIAGV-KPNSVTIPCLLPACGNIAALMHGKAA 408
Query: 253 --------------------------------RILFNEIDSPDLASWNALIAGVASHSNA 280
RI F+ I + +L WNA+IAG A H A
Sbjct: 409 HCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKA 468
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACI-GRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
EAM +F M+ PD ++ +L AC LT +S K G ++ V
Sbjct: 469 KEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYAC 528
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRL 388
++T+ ++ L A + + + N D+ W +++++C HN AE+LF L
Sbjct: 529 MVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFEL 584
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 185/570 (32%), Positives = 295/570 (51%), Gaps = 45/570 (7%)
Query: 53 LGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ-RNVVSWTAMIAGC 111
LG +VH + + D+ + N ++ MYG G +++AR FD+ + RN VSW M++
Sbjct: 118 LGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAF 177
Query: 112 SQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL 171
+N + +DA++L+ +M+ SGV P +F F ++ AC+G + GR++HA V+++ + +
Sbjct: 178 VKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDV 237
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH 231
NAL+ MY+K I A VF + + DV SW + I+ G++ AL +M
Sbjct: 238 FTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSS 297
Query: 232 GAYQPNEF----------------------IFGSVFSACSNF------------------ 251
G PN F I G + AC++
Sbjct: 298 GLV-PNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLL 356
Query: 252 --ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
AR +F I DL WNALI+G + E++SLF MR + T+ ++L +
Sbjct: 357 DDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKST 416
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSW 369
+ QVH+ K+GF S+ V N ++ Y KC+ L A VF+E + + +++
Sbjct: 417 ASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSD-NIIAF 475
Query: 370 NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
S+I A Q + E+ +LF ML ++PD + ++ ACA +++ E Q+H ++ K
Sbjct: 476 TSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 535
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
DVF N L+ Y KCGS+ A F+ + + VVSWS++I G AQ G G AL +
Sbjct: 536 RKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDV 595
Query: 490 FTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLA 549
F RM ++PN +TL VL AC+H GLV+E + M+ +GI T EH SC++DLL
Sbjct: 596 FRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLG 655
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLLAS 579
RAG + +A + +N M +A+ VW +LLA+
Sbjct: 656 RAGKLDDAMELVNSMPFEANAAVWGALLAA 685
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 155/534 (29%), Positives = 256/534 (47%), Gaps = 50/534 (9%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P + + L++ ++ +SL LG +H H+L S +NH+L+ Y KC AR FD
Sbjct: 4 PESISPLLTRYAATQSLFLGAHIHAHLLKSGLLH--AFRNHLLSFYSKCRLPGSARRVFD 61
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+ P VSW++++ S N +A+ + M GV +F ++K G L
Sbjct: 62 ETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAG---L 118
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR-KDVTSWGSMIAAFS 213
G Q+HA + + + NAL+AMY F + +AR VF AR ++ SW M++AF
Sbjct: 119 GVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFV 178
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------ 249
K +A+ F EM+ G +PNEF F V +AC+
Sbjct: 179 KNDRCSDAVELFGEMVWSGV-RPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDV 237
Query: 250 ----------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
+ A ++F ++ D+ SWNA I+G H + A+ L +M+
Sbjct: 238 FTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSS 297
Query: 294 ELLPDGLTVHSLL--CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
L+P+ T+ S+L CA G G Q+H ++IK DS+ + A++ MYAK +L
Sbjct: 298 GLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLD 357
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A VF+ + + D + WN++I+ C E LF RM + T V+ +
Sbjct: 358 DARKVFEWIPRK-DLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKST 416
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
A + ++ TQ+H K G D V+NGL+D Y KC L A K+F + ++++++
Sbjct: 417 ASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFT 476
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
S+I +Q G++A+KLF M G+ P+ L +L AC+ + E+G ++
Sbjct: 477 SMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVH 530
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/491 (29%), Positives = 236/491 (48%), Gaps = 54/491 (10%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP+ + + +++AC+ R L+ GRKVH ++ + DV N +++MY K G + A
Sbjct: 198 VRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAA 257
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK--ACSG 148
+ F K+P+ +VVSW A I+GC + + A++L +QM SG++P FT SI+K A +G
Sbjct: 258 LVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAG 317
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
G+ LGRQ+H +IK+ S AL+ MY K+ + DAR VF I RKD+ W ++
Sbjct: 318 AGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNAL 377
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA--------------------- 247
I+ S G E+L F M G+ N +V +
Sbjct: 378 ISGCSHGGCHGESLSLFCRMRKEGS-DINRTTLAAVLKSTASLEAISDTTQVHALAEKIG 436
Query: 248 -------------------CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
C +A +F E S ++ ++ ++I ++ + +A+ LF
Sbjct: 437 FLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFM 496
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
EM + L PD + SLL AC QG QVH+++IK F ++V NA++ YAKC
Sbjct: 497 EMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCG 556
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ +A L F L + VSW+++I QH + +F RM+ +I P+HIT V+
Sbjct: 557 SIEDADLAFSGL-PDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVL 615
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNG----LMDIYIKCGSLGSARKLFNFME- 463
AC +V + Y + F + ++D+ + G L A +L N M
Sbjct: 616 CACNHAG---LVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPF 672
Query: 464 NPDVVSWSSLI 474
+ W +L+
Sbjct: 673 EANAAVWGALL 683
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 412 AKMASLEMVTQLHCYITKTGL--AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
A SL + +H ++ K+GL AF N L+ Y KC GSAR++F+ +P VS
Sbjct: 15 AATQSLFLGAHIHAHLLKSGLLHAF----RNHLLSFYSKCRLPGSARRVFDETPDPCHVS 70
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
WSSL+ Y+ EAL F MR+ GV N L VL GL + +H +
Sbjct: 71 WSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGLGVQ-VHAVAVST 129
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G I + +V + G V EA ++ A D + V W ++++
Sbjct: 130 GLSGDIFV---ANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSA 176
>gi|302788580|ref|XP_002976059.1| hypothetical protein SELMODRAFT_104710 [Selaginella moellendorffii]
gi|300156335|gb|EFJ22964.1| hypothetical protein SELMODRAFT_104710 [Selaginella moellendorffii]
Length = 699
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 191/592 (32%), Positives = 306/592 (51%), Gaps = 29/592 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRK----VH 58
N +++ + EA+ + Q + I T+ ++SAC +L+ + V
Sbjct: 80 NAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDPSALEAANRIFALVE 139
Query: 59 DHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN-VVSWTAMIAGCSQNYQE 117
+ LL DVVL N ++NMY KCGSL+ A M F++M R+ VV WT MI+ +Q+
Sbjct: 140 ERGLLDS---DVVLGNALVNMYSKCGSLKSATMVFERMKIRDDVVLWTTMISVYAQDGYS 196
Query: 118 NDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA 176
A++L+ QM + ++P FT S + AC+G + GR++HA VI+ S L+ NA
Sbjct: 197 EAALELFQQMEKEEALLPDGFTLASALAACTGPEMLEEGREIHALVIERGCESELVVGNA 256
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
L++MY + DA F +A+++V SW +MIAA+ + EA F +M G QP
Sbjct: 257 LVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRIFYQMQLEGV-QP 315
Query: 237 NEFIFGSVFSACSNFA-------RILFNE--IDSPDLASWNALIAGVASHSNANEAMSLF 287
N F + S CS A R L E ++S D NAL+ A +E +F
Sbjct: 316 NSVTFVTFLSTCSTPAAFEDGLIRALEVEKRVESLDALVGNALLHTYAKLGKLDEVQRVF 375
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
M + D +T ++++ + +++ N+ N +L Y
Sbjct: 376 QRMEKQR--DDVVTWNAVIEGSVRNGEFRNALELMP-------QKNLGSWNGLLGAYIHV 426
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
L + +F+E+ + D ++WN I+ A ++ + A+E RLF RM+A +P+ IT+ +
Sbjct: 427 GRLADTRKLFEEM-EERDVITWNMILGAYVERDMAKEAVRLFRRMIAEGTEPNSITWTTM 485
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
+GACA ASL ++H I + G ++FV N L+D++ KC SLG AR+ F + D
Sbjct: 486 LGACAGEASLAEGRRVHELIAERGADSELFVGNALVDMFGKCASLGGARQAFERIRAKDA 545
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
SW+ L+ AQ G +EALK F RM+ G+ P VT + V ACSH G +E+ ++
Sbjct: 546 SSWNVLVAALAQNGDAEEALKQFLRMQREGIKPTDVTFIVVFWACSHAGRLEQAKTIFAS 605
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++YGI P H S + DLL RAG + EAE+ I ++ D + W +LL++
Sbjct: 606 LRHDYGIAPLPSHYSGMTDLLGRAGFLDEAEEVIKRIPFSRDELPWMTLLSA 657
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/449 (29%), Positives = 220/449 (48%), Gaps = 53/449 (11%)
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
ML G++P +F + +K+C + S+ G+ +H VI+S + + NAL+ MY K
Sbjct: 1 MLLHGLLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGS 60
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+ AR VF G+ +DV SW ++I A+++ G+ EA+ F M G +P+ F +V S
Sbjct: 61 LALAREVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVS 120
Query: 247 ACSN-----------------------------------------FARILFNEID-SPDL 264
AC + A ++F + D+
Sbjct: 121 ACCDPSALEAANRIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDDV 180
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRE-LLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
W +I+ A + A+ LF +M E LLPDG T+ S L AC G L +G ++H+
Sbjct: 181 VLWTTMISVYAQDGYSEAALELFQQMEKEEALLPDGFTLASALAACTGPEMLEEGREIHA 240
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+I+ G +S + V NA+++MYA C L +AL F+++ + + VSWN++IAA + HN +
Sbjct: 241 LVIERGCESELVVGNALVSMYANCGTLQDALECFQKMAQR-NVVSWNAMIAAYVHHNCDK 299
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
E FR+F +M ++P+ +TF + C+ A+ E + K + D V N L+
Sbjct: 300 EAFRIFYQMQLEGVQPNSVTFVTFLSTCSTPAAFEDGLIRALEVEKRVESLDALVGNALL 359
Query: 444 DIYIKCGSLGSARKLFNFMENP--DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
Y K G L +++F ME DVV+W+++I G + G AL+L + N
Sbjct: 360 HTYAKLGKLDEVQRVFQRMEKQRDDVVTWNAVIEGSVRNGEFRNALELMPQ-------KN 412
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
L + G+L A HVG + + L+ ME
Sbjct: 413 LGSWNGLLGAYIHVGRLADTRKLFEEMEE 441
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 111/189 (58%), Gaps = 3/189 (1%)
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
ML + PD+++F + +C ++ SL +H + ++GL + V N L+++Y KCGS
Sbjct: 1 MLLHGLLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGS 60
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNLVTLVGVLT 510
L AR++F+ M++ DV+SW+++I YAQ G EA++LF M+ G + P+ VT V V++
Sbjct: 61 LALAREVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVS 120
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHC-SCVVDLLARAGCVHEAEDFINQMACDAD 569
AC +E ++ ++E E G++ + + +V++ ++ G + A +M D
Sbjct: 121 ACCDPSALEAANRIFALVE-ERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDD 179
Query: 570 IVVWKSLLA 578
+V+W ++++
Sbjct: 180 VVLWTTMIS 188
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 170/424 (40%), Gaps = 121/424 (28%)
Query: 33 IRPS--TYAGLISACSS--------LRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGK 82
++P+ T+ +S CS+ +R+L++ ++V D ++ N +L+ Y K
Sbjct: 313 VQPNSVTFVTFLSTCSTPAAFEDGLIRALEVEKRVESL--------DALVGNALLHTYAK 364
Query: 83 CGSLEDARMGFDKMPQR--NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFG 140
G L++ + F +M ++ +VV+W A+I G +N + +A++L MP Q G
Sbjct: 365 LGKLDEVQRVFQRMEKQRDDVVTWNAVIEGSVRNGEFRNALEL---------MP-QKNLG 414
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
S N L+ Y R+ D R +F + +
Sbjct: 415 S--------------------------------WNGLLGAYIHVGRLADTRKLFEEMEER 442
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA-------- 252
DV +W ++ A+ + EA+ F M+ G +PN + ++ AC+ A
Sbjct: 443 DVITWNMILGAYVERDMAKEAVRLFRRMIAEGT-EPNSITWTTMLGACAGEASLAEGRRV 501
Query: 253 --------------------------------RILFNEIDSPDLASWNALIAGVASHSNA 280
R F I + D +SWN L+A +A + +A
Sbjct: 502 HELIAERGADSELFVGNALVDMFGKCASLGGARQAFERIRAKDASSWNVLVAALAQNGDA 561
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCAC--IGRL----TLYQGMQVHSYIIKMGFDSNV 334
EA+ F M+ + P +T + AC GRL T++ ++ H Y I + +
Sbjct: 562 EEALKQFLRMQREGIKPTDVTFIVVFWACSHAGRLEQAKTIFASLR-HDYGI-----APL 615
Query: 335 PVCNAILT-MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
P + +T + + L A V K + + D + W ++++AC H E R +
Sbjct: 616 PSHYSGMTDLLGRAGFLDEAEEVIKRIPFSRDELPWMTLLSACKVHGDVER-----GRKV 670
Query: 394 ASQI 397
A Q+
Sbjct: 671 AGQV 674
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 174/624 (27%), Positives = 300/624 (48%), Gaps = 77/624 (12%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
++ P T + ++ CS L+ L+ G+++H ++ DV + + +N Y KC + +A
Sbjct: 136 KVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREA 195
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQ-ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
+ FD MP R+VV+W ++ + C N + ++ +M+ GV P T I+ ACS
Sbjct: 196 QTVFDLMPHRDVVTWNSL-SSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSD 254
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
L + G+ +H +K ++ NAL+ +Y + +A+ VF + ++V +W S+
Sbjct: 255 LQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSL 314
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------- 251
+ + G+ + L F EM +G +P+ S+ ACS
Sbjct: 315 ASCYVNCGFPQKGLNVFREMGLNGV-KPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHG 373
Query: 252 -----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
A+ +F+ + ++ +WN+L + + + +++F
Sbjct: 374 MVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFR 433
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
EM + PD +T+ S+L AC L G +H + ++ G +V VCNA+L++YAKC
Sbjct: 434 EMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCV 493
Query: 349 VLCNALLVF---------------------KELGK-------------NADSVSWNSIIA 374
+ A +VF KE K AD ++W+ +I
Sbjct: 494 CVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIG 553
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
C+++++ EE +F +M KPD T ++ AC+ L M ++HCY+ + +
Sbjct: 554 GCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDW 613
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
D+ N L+D+Y KCG L +R +F+ M DV SW+++I G G EAL LF +M
Sbjct: 614 DLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKML 673
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCV 554
V P+ T VL+ACSH LVEEG+ ++ M ++ + P EH +CVVD+ +RAGC+
Sbjct: 674 LSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCL 733
Query: 555 HEAEDFINQMACDADIVVWKSLLA 578
EA FI +M + + WK+ LA
Sbjct: 734 EEAYGFIQRMPMEPTAIAWKAFLA 757
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/556 (23%), Positives = 254/556 (45%), Gaps = 43/556 (7%)
Query: 14 LYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQ 73
L NEA+ Y S I+ + + AC++ R ++ HD DV +
Sbjct: 20 LPNEAIKIYT-SSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIG 78
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N ++ YGKC +E AR FD + R+VV+W ++ A + ++ +M + V
Sbjct: 79 NAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVK 138
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
T SI+ CS L + G+++H V++ + +A + Y K + +A+ V
Sbjct: 139 ANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTV 198
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-- 251
F + +DV +W S+ + + G+ + L F EM+ G +P+ + SACS+
Sbjct: 199 FDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGV-KPDPVTVSCILSACSDLQD 257
Query: 252 --------------------------------------ARILFNEIDSPDLASWNALIAG 273
A+ +F+ + ++ +WN+L +
Sbjct: 258 LKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASC 317
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
+ + +++F EM + PD + + S+L AC L G +H + +K G +
Sbjct: 318 YVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVED 377
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
V VC A++ +YA C + A VF +L + + V+WNS+ + + ++ +F M+
Sbjct: 378 VFVCTALVNLYANCLCVREAQTVF-DLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMV 436
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
+ +KPD +T ++ AC+ + L+ +H + + G+ DVFV N L+ +Y KC +
Sbjct: 437 LNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVR 496
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
A+ +F+ + + +V SW+ ++ Y ++ L +F++M V + +T V+ C
Sbjct: 497 EAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCV 556
Query: 514 HVGLVEEGLHLYRIME 529
+EE + ++R M+
Sbjct: 557 KNSRIEEAMEIFRKMQ 572
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 179/342 (52%), Gaps = 7/342 (2%)
Query: 237 NEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
N FI C AR +F+++ + D+ +WN+L A + + +++F +M ++
Sbjct: 79 NAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVK 138
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
+ LTV S+L C L G ++H ++++ G +V V +A + YAKC + A V
Sbjct: 139 ANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTV 198
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F +L + D V+WNS+ + + ++ +F M+ +KPD +T + ++ AC+ +
Sbjct: 199 F-DLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQD 257
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L+ +H + K G+ +VFV N L+++Y C + A+ +F+ M + +V++W+SL
Sbjct: 258 LKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASC 317
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGI 534
Y G + L +F M GV P+ + + +L ACS + ++ G +H + + ++G+
Sbjct: 318 YVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAV---KHGM 374
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
+ C+ +V+L A CV EA+ + M ++V W SL
Sbjct: 375 VEDVFVCTALVNLYANCLCVREAQTVFDLMP-HRNVVTWNSL 415
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 153/302 (50%), Gaps = 7/302 (2%)
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
H NEA+ +++ R R + PD ++ AC + Q H + G S+V +
Sbjct: 18 HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
NA + Y KC + A VF +L D V+WNS+ A + ++ +F +M ++
Sbjct: 78 GNAFIHAYGKCKCVEGARRVFDDLVAR-DVVTWNSLSACYVNCGFPQQGLNVFRKMGLNK 136
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
+K + +T + ++ C+ + L+ ++H ++ + G+ DVFV + ++ Y KC + A+
Sbjct: 137 VKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQ 196
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
+F+ M + DVV+W+SL Y G + L +F M GV P+ VT+ +L+ACS +
Sbjct: 197 TVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQ 256
Query: 517 LVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
++ G +H + + ++G++ + +V+L CV EA+ + M +++ W
Sbjct: 257 DLKSGKAIHGFAL---KHGMVENVFVSNALVNLYESCLCVREAQAVFDLMP-HRNVITWN 312
Query: 575 SL 576
SL
Sbjct: 313 SL 314
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 179/430 (41%), Gaps = 79/430 (18%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++ P + ++ ACS L+ L+ G+ +H + DV + ++N+Y C + +A+
Sbjct: 339 VKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQ 398
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQ-ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
FD MP RNVV+W ++ + C N + ++ +M+ +GV P T SI+ ACS L
Sbjct: 399 TVFDLMPHRNVVTWNSL-SSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDL 457
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW-GSM 208
+ G+ +H ++ + NAL+++Y K + +A+ VF I ++V SW G +
Sbjct: 458 QDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGIL 517
Query: 209 IAAFSKLGYEL----------------------------------EALCHFNEMLHHGAY 234
A F+ YE EA+ F +M G +
Sbjct: 518 TAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMG-F 576
Query: 235 QPNEFIFGSVFSACS----------------------------------------NFARI 254
+P+E S+ ACS + +R
Sbjct: 577 KPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRN 636
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+F+ + D+ SWN +I H N EA+SLF +M + PD T +L AC +
Sbjct: 637 VFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSML 696
Query: 315 LYQGMQVHSYIIKMGF-DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
+ +G+Q+ + + + + ++ +Y++ L A + + +++W + +
Sbjct: 697 VEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFL 756
Query: 374 AACLQHNQAE 383
A C + E
Sbjct: 757 AGCRVYKNVE 766
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 2/200 (1%)
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
+ H E ++++ A IKPD F V ACA V Q H T+ G+ DV
Sbjct: 16 IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDV 75
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
+ N + Y KC + AR++F+ + DVV+W+SL Y G + L +F +M
Sbjct: 76 SIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLN 135
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
V N +T+ +L CS + ++ G ++ + +G++ S V+ A+ CV E
Sbjct: 136 KVKANPLTVSSILPGCSDLQDLKSGKEIHGFVV-RHGMVEDVFVSSAFVNFYAKCLCVRE 194
Query: 557 AEDFINQMACDADIVVWKSL 576
A+ + M D+V W SL
Sbjct: 195 AQTVFDLMP-HRDVVTWNSL 213
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 174/614 (28%), Positives = 314/614 (51%), Gaps = 43/614 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + L EA Y + T + P + ++SAC+ + GR +H +
Sbjct: 116 LSGYAQSGLGKEAFRLYS-QMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQA 174
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ + N ++ +Y GS + A F M + V++ +I+G +Q A++++
Sbjct: 175 FCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFD 234
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M SG+ P T S++ AC+ +G + G+QLH++++K+ I + +L+ +Y K
Sbjct: 235 EMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCG 294
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I A ++F+ R +V W M+ A+ ++ ++ F +M G + PN+F + +
Sbjct: 295 DIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIH-PNQFTYPCIL 353
Query: 246 SACS----------------------------------------NFARILFNEIDSPDLA 265
C+ + AR + ++ D+
Sbjct: 354 RTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVV 413
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW ++IAG H EA++ F EM+D + PD + + S AC G + QG+Q+H+ +
Sbjct: 414 SWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARV 473
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
G+ +++ + N ++ +YA+C A +F+E+ ++ D ++WN +I+ Q ++
Sbjct: 474 YVSGYAADISIWNTLVNLYARCGRSEEAFSLFREI-EHKDEITWNGLISGFGQSRLYKQA 532
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
+F +M + K + TF + A A +A ++ Q+H KTG + V N L+ +
Sbjct: 533 LMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISL 592
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y KCGS+ A+ +F+ M + VSW+++I +Q G G EAL LF +M+ G+ PN VT
Sbjct: 593 YGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTF 652
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
+GVL ACSHVGLVEEGL ++ M N YG+ P +H +CVVD+L RAG + A F+++M
Sbjct: 653 IGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMP 712
Query: 566 CDADIVVWKSLLAS 579
A+ ++W++LL++
Sbjct: 713 ITANAMIWRTLLSA 726
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 148/567 (26%), Positives = 271/567 (47%), Gaps = 50/567 (8%)
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
++H ++ D ++ N ++++Y K G + AR F ++ R+ VSW AM++G +Q+
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+A +LY QM + V+P + S++ AC+ GR +HA V K S N
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
ALIA+Y F A VF + D ++ ++I+ ++ G+ AL F+EM G +
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSG-LR 242
Query: 236 PNEFIFGSVFSACSNF----------------------------------------ARIL 255
P+ S+ +AC++ A +
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDI 302
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL--CACIGRL 313
FN D ++ WN ++ S+ ++ +F +M+ + P+ T +L C C G++
Sbjct: 303 FNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQI 362
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
L G Q+HS IK GF+S++ V ++ MY+K L A + + L K D VSW S+I
Sbjct: 363 EL--GEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKR-DVVSWTSMI 419
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
A +QH+ EE F M + PD+I ACA + ++ Q+H + +G A
Sbjct: 420 AGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYA 479
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
D+ + N L+++Y +CG A LF +E+ D ++W+ LI G+ Q +AL +F +M
Sbjct: 480 ADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKM 539
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAG 552
G N+ T + ++A +++ +++G ++ R ++ G E + ++ L + G
Sbjct: 540 GQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKT--GHTSETEVANALISLYGKCG 597
Query: 553 CVHEAEDFINQMACDADIVVWKSLLAS 579
+ +A+ ++M+ + V W +++ S
Sbjct: 598 SIEDAKMIFSEMSLRNE-VSWNTIITS 623
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 189/429 (44%), Gaps = 66/429 (15%)
Query: 14 LYNEALVAYD-----------FSQ-NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
L+N LVAY F Q T I TY ++ C+ ++LG ++H
Sbjct: 313 LWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLS 372
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ + + D+ + +++MY K G L+ AR + + +R+VVSWT+MIAG Q+ +A+
Sbjct: 373 IKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEAL 432
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+ +M GV P S AC+G+ ++ G Q+HA V S + + + N L+ +Y
Sbjct: 433 ATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLY 492
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
+ R +A ++F I KD +W +I+ F + +AL F +M GA + N F F
Sbjct: 493 ARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGA-KYNVFTF 551
Query: 242 GSVFSACSNF----------------------------------------ARILFNEIDS 261
S SA +N A+++F+E+
Sbjct: 552 ISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSL 611
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
+ SWN +I + H EA+ LF +M+ L P+ +T +L AC + +G+
Sbjct: 612 RNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGL-- 669
Query: 322 HSYIIKMGFDSNVPVCNAILTMYA-------KCSVLCNALLVFKELGKNADSVSWNSIIA 374
SY M SNV N I YA + L A E+ A+++ W ++++
Sbjct: 670 -SYFKSM---SNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLS 725
Query: 375 ACLQHNQAE 383
AC H E
Sbjct: 726 ACKVHKNIE 734
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 142/275 (51%), Gaps = 4/275 (1%)
Query: 306 LCACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
L AC GR + +++H+ + G ++ + N ++ +YAK ++ A VFKEL
Sbjct: 49 LQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSR- 107
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
D VSW ++++ Q +E FRL+S+M + + P + V+ AC K +H
Sbjct: 108 DHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIH 167
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
+ K + FV N L+ +Y+ GS A ++F M D V++++LI G+AQ G G+
Sbjct: 168 AQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGE 227
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV 544
AL++F M+ G+ P+ VT+ +L AC+ VG +++G L+ + G+ +
Sbjct: 228 CALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKA-GMSFDYITEGSL 286
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+DL + G + A D N + ++V+W +L +
Sbjct: 287 LDLYVKCGDIETAHDIFN-LGDRTNVVLWNLMLVA 320
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 187/582 (32%), Positives = 292/582 (50%), Gaps = 93/582 (15%)
Query: 59 DHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN------------------ 100
D I+ D+V+ N +++ Y + G+L AR+ FD+MP+RN
Sbjct: 76 DQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVE 135
Query: 101 -------------VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
VVSWTA I+G +N +A+KL+ ++L+SGV P TF S+++AC
Sbjct: 136 ESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACG 195
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
LG LG + V+K+ +L N+LI + + I AR VF + ++DV SW +
Sbjct: 196 ELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTA 255
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASW 267
++ A+ + G EA F+EM NEI SW
Sbjct: 256 ILDAYVETGDLREARRIFDEMPER-------------------------NEI------SW 284
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
+A+IA + A EA+ LFS+M P+ L A L G+ +H ++ K
Sbjct: 285 SAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTK 344
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKE-LGKNA---------------------- 364
+G D +V + ++++ +Y KC + LVF L KN
Sbjct: 345 IGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEEL 404
Query: 365 -------DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+ VSW +IIA L++ Q E++ +F+ +L S P+ TF+ V+ ACA +ASL
Sbjct: 405 FELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASL 464
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
+ +H I K G+ +D+FV L D+Y KCG +GS++++F M + +SW+ +I G
Sbjct: 465 DKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGL 524
Query: 478 AQFGCGDEALKLFTRM-RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
A+ G E+L LF M R+ V+PN + L+ VL ACSH GLV++GL + ME YGI P
Sbjct: 525 AESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKP 584
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+H +CVVDLL+R+G ++EAE+FI + + W +LL+
Sbjct: 585 KGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLS 626
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 123/520 (23%), Positives = 215/520 (41%), Gaps = 89/520 (17%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + L EAL + F + +R T+ ++ AC L LG + ++ +
Sbjct: 156 ISGFVRNGLNFEALKLF-FRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAG 214
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWT-------------------- 105
+ + + N ++ + + G ++ AR FD+M +R+VVSWT
Sbjct: 215 FEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFD 274
Query: 106 -----------AMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
AMIA SQ+ +A+KL+ +M+Q G P F + A + L ++
Sbjct: 275 EMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSA 334
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G +H HV K + ++LI +Y K + D R VF I K+V W SM+ +S
Sbjct: 335 GINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSI 394
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGV 274
G LF I + SW +IAG
Sbjct: 395 NGR-------------------------------LEETEELFELIPEKNDVSWGTIIAGY 423
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+ + + +F+ + P+ T S+LCAC +L +GM VH IIK+G ++
Sbjct: 424 LENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDI 483
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM-L 393
V A+ MYAKC + ++ VF+ + + + +SW +I + A E LF M
Sbjct: 484 FVGTALTDMYAKCGDIGSSKQVFERMPEK-NEISWTVMIQGLAESGFAVESLILFEEMER 542
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF-----DVFVMNG------- 441
S++ P+ + V+ AC+ HC + GL + V+ +
Sbjct: 543 TSEVAPNELMLLSVLFACS-----------HCGLVDKGLWYFNSMEKVYGIKPKGKHYTC 591
Query: 442 LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYAQF 480
++D+ + G L A + + P+ +W++L+ G ++
Sbjct: 592 VVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKY 631
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 139/328 (42%), Gaps = 71/328 (21%)
Query: 315 LYQGMQVHSYIIKMGFD-------------------------------SNVPVCNAILTM 343
+ QG +H+++IK GF S++ V N +++
Sbjct: 37 ITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISA 96
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE-------------------- 383
Y + L A L+F E+ + + VSW+++I+ +++ + E
Sbjct: 97 YVQWGNLVQARLLFDEMPER-NEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAA 155
Query: 384 -----------ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
E +LF R+L S ++P+ +TF V+ AC ++ + + + K G
Sbjct: 156 ISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGF 215
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
+ V N L+ + ++ G + AR++F+ ME DVVSW++++ Y + G EA ++F
Sbjct: 216 EHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDE 275
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAG 552
M N ++ ++ S G EE L L+ M E G P +C + LA
Sbjct: 276 MPER----NEISWSAMIARYSQSGYAEEALKLFSKMVQE-GFKPNISCFACTLSALASLR 330
Query: 553 CVHEAEDF---INQMACDADIVVWKSLL 577
+ + + ++ D D+ + SL+
Sbjct: 331 ALSAGINIHGHVTKIGIDKDVFIGSSLI 358
>gi|302757275|ref|XP_002962061.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
gi|300170720|gb|EFJ37321.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
Length = 847
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 184/600 (30%), Positives = 306/600 (51%), Gaps = 57/600 (9%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ P +A I ACSS+ SL+ G +H +L S + D V+ N +LN Y K G + ++R
Sbjct: 203 LEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDGVVGNALLNFYAKAGLVHESR 262
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F M +NVV+W+A++A +QN A++L+ +ML GV P + TF S++ +CS G
Sbjct: 263 SLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGVAPNKVTFVSLLFSCSHAG 322
Query: 151 ---SVCLGRQLHAHVIKSEHGS-HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
+ GR++HA ++KS + ++ AL+ MY + + DA+ VF + +++TSW
Sbjct: 323 LIKDLARGRKIHAEILKSTAAAGDVVVATALVNMYGRCGSVSDAKTVFDEMQHRNITSWN 382
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHG-AYQPNEFIFGSVFSAC----------------- 248
+M+ +S LEAL F ML G +P+ F S AC
Sbjct: 383 AMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGMMGDLSRAVEIHSRIS 442
Query: 249 --------------------------SNFARILFNEIDSPDLASWNALIAGVASHSNANE 282
++ A++L +++ ++ SW ++I + +
Sbjct: 443 QSWPSNQTDVVLGSALIKMYGNCRRLADAAQVL-DQMPRTNVISWTSMILACEQNEDNEA 501
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
A+ ++ M+ PD +T+ +++ A L +G++ H+ GF ++ V NA++T
Sbjct: 502 AIRVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQAAAFGFATSTVVGNALVT 561
Query: 343 MYAKCSVLCNALLVFKELGKNA--DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+Y L A VFKEL + + D V+WNS+++A Q+ + F RML PD
Sbjct: 562 LYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQALGTFQRMLHHGRHPD 621
Query: 401 HITFNDVMGACAKMAS-LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
TF +++ ACA S L ++H GL D+ V N L+ +Y +CG+L ARK+F
Sbjct: 622 KTTFVNILNACAGDPSKLLQGVKIHALAAACGLDSDIDVANTLLHMYSRCGNLSRARKVF 681
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ + +VVSWS++ A G D AL+ F M G+ PN VT + +L+ CSH GL++
Sbjct: 682 HALTQKNVVSWSAMAAACAHNGDADGALQAFRGMLHGGIQPNAVTFISILSGCSHTGLMD 741
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
E + M +++ + PT +H +C++DLLARAG H AE+ + + V W SLL +
Sbjct: 742 EAVSYLYAMSSDHNLKPTVQHYACLLDLLARAGKFHRAEELATHL---PNPVAWNSLLGA 798
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 158/591 (26%), Positives = 290/591 (49%), Gaps = 63/591 (10%)
Query: 49 RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMI 108
++L GR VH ++ S D L N ++ MYG+C S+ DA F + ++NV +WT +I
Sbjct: 9 KNLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNVFTWTILI 68
Query: 109 AGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS--GLGSVCLGRQLHAHV---- 162
+ N +A++L+ +M GV +FTF +I++ACS GL + LG+ +H+ +
Sbjct: 69 VAHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTIHSRIHQQG 128
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFS----GIARKDVTSWGSMIAAFSKLGYE 218
+K +I A+I Y + I A +F + D+ +W +M+ A+++LG+
Sbjct: 129 LKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAMMTAYNQLGHA 188
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACS----------------------------- 249
EAL F +M G +P+ F F + ACS
Sbjct: 189 REALLLFRKMDLQG-LEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDGVVGNA 247
Query: 250 --NF---------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
NF +R LF+ + ++ +W+A++A A + + A+ LF EM + P+
Sbjct: 248 LLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGVAPN 307
Query: 299 GLTVHSLLCAC--IGRLT-LYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNAL 354
+T SLL +C G + L +G ++H+ I+K +V V A++ MY +C + +A
Sbjct: 308 KVTFVSLLFSCSHAGLIKDLARGRKIHAEILKSTAAAGDVVVATALVNMYGRCGSVSDAK 367
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML--ASQIKPDHITFNDVMGACA 412
VF E+ ++ + SWN+++ + ++ E R F ML +KPD ITF AC
Sbjct: 368 TVFDEM-QHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACG 426
Query: 413 KMASLEMVTQLHCYITKTGLA--FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
M L ++H I+++ + DV + + L+ +Y C L A ++ + M +V+SW
Sbjct: 427 MMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRRLADAAQVLDQMPRTNVISW 486
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
+S+IL Q + A++++ M+ G P+ VT+V V+ A +++ ++ G+ +
Sbjct: 487 TSMILACEQNEDNEAAIRVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIE-FHAQAA 545
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA--DIVVWKSLLAS 579
+G + + +V L +G + AE+ ++ + D+V W S+L++
Sbjct: 546 AFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSA 596
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 143/538 (26%), Positives = 254/538 (47%), Gaps = 63/538 (11%)
Query: 37 TYAGLISACSSL--RSLQLGRKVHDHI----LLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
T++ ++ ACS+L L LG+ +H I L P V+ +++ Y + G +E A
Sbjct: 98 TFSAILEACSNLGLAFLSLGKTIHSRIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAA 157
Query: 91 MGFDKMPQR----NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
F++M + ++++WTAM+ +Q +A+ L+ +M G+ P +F F + I AC
Sbjct: 158 EIFERMQLQVLDPDLIAWTAMMTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDAC 217
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
S + S+ G LH+ ++ S + NAL+ Y K + ++R++FS + K+V +W
Sbjct: 218 SSIPSLEQGTVLHSRLLASSVECDGVVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWS 277
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------- 251
+++AA+++ G+ A+ F EML G PN+ F S+ +CS+
Sbjct: 278 AIVAAYAQNGHHEPAVELFREMLLDGV-APNKVTFVSLLFSCSHAGLIKDLARGRKIHAE 336
Query: 252 -----------------------------ARILFNEIDSPDLASWNALIAGVASHSNANE 282
A+ +F+E+ ++ SWNA++ + + + E
Sbjct: 337 ILKSTAAAGDVVVATALVNMYGRCGSVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLE 396
Query: 283 AMSLFSEM--RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM--GFDSNVPVCN 338
A+ F M + PD +T S AC L + +++HS I + ++V + +
Sbjct: 397 ALRFFRTMLLEGEGVKPDAITFVSAADACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGS 456
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
A++ MY C L +A V ++ + + +SW S+I AC Q+ E R++ M K
Sbjct: 457 ALIKMYGNCRRLADAAQVLDQMPRT-NVISWTSMILACEQNEDNEAAIRVYRAMQLHGHK 515
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
PD +T V+ A A + L+ + H G A V N L+ +Y G L +A +
Sbjct: 516 PDPVTMVTVIKAAANLHDLKRGIEFHAQAAAFGFATSTVVGNALVTLYGTSGDLQAAENV 575
Query: 459 FNFMEN---PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
F + DVV+W+S++ + Q G ++AL F RM G P+ T V +L AC+
Sbjct: 576 FKELLQQSVEDVVTWNSMLSAWNQNGLPNQALGTFQRMLHHGRHPDKTTFVNILNACA 633
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 182/400 (45%), Gaps = 61/400 (15%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLS--KCQPDVVLQNHILNMYGKCGSLED 88
++P T+ AC + L ++H I S Q DVVL + ++ MYG C L D
Sbjct: 411 VKPDAITFVSAADACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRRLAD 470
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A D+MP+ NV+SWT+MI C QN AI++Y M G P T ++IKA +
Sbjct: 471 AAQVLDQMPRTNVISWTSMILACEQNEDNEAAIRVYRAMQLHGHKPDPVTMVTVIKAAAN 530
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK---DVTSW 205
L + G + HA + + NAL+ +Y + A NVF + ++ DV +W
Sbjct: 531 LHDLKRGIEFHAQAAAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTW 590
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------- 249
SM++A+++ G +AL F MLHHG + P++ F ++ +AC+
Sbjct: 591 NSMLSAWNQNGLPNQALGTFQRMLHHGRH-PDKTTFVNILNACAGDPSKLLQGVKIHALA 649
Query: 250 -------------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
+ AR +F+ + ++ SW+A+ A A + +A+ A+
Sbjct: 650 AACGLDSDIDVANTLLHMYSRCGNLSRARKVFHALTQKNVVSWSAMAAACAHNGDADGAL 709
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV-PVCN---AI 340
F M + P+ +T S+L C + + + SY+ M D N+ P +
Sbjct: 710 QAFRGMLHGGIQPNAVTFISILSGCSHTGLMDEAV---SYLYAMSSDHNLKPTVQHYACL 766
Query: 341 LTMYAKCSVLCNALLVFKELGKN-ADSVSWNSIIAACLQH 379
L + A+ A +EL + + V+WNS++ ACL H
Sbjct: 767 LDLLARAGKFHRA----EELATHLPNPVAWNSLLGACLVH 802
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 187/582 (32%), Positives = 292/582 (50%), Gaps = 93/582 (15%)
Query: 59 DHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN------------------ 100
D I+ D+V+ N +++ Y + G+L AR+ FD+MP+RN
Sbjct: 76 DQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVE 135
Query: 101 -------------VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
VVSWTA I+G +N +A+KL+ ++L+SGV P TF S+++AC
Sbjct: 136 ESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACG 195
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
LG LG + V+K+ +L N+LI + + I AR VF + ++DV SW +
Sbjct: 196 ELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTA 255
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASW 267
++ A+ + G EA F+EM NEI SW
Sbjct: 256 ILDAYVETGDLREARRIFDEMPER-------------------------NEI------SW 284
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
+A+IA + A EA+ LFS+M P+ L A L G+ +H ++ K
Sbjct: 285 SAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTK 344
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKE-LGKNA---------------------- 364
+G D +V + ++++ +Y KC + LVF L KN
Sbjct: 345 IGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEEL 404
Query: 365 -------DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+ VSW +IIA L++ Q E++ +F+ +L S P+ TF+ V+ ACA +ASL
Sbjct: 405 FELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASL 464
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
+ +H I K G+ +D+FV L D+Y KCG +GS++++F M + +SW+ +I G
Sbjct: 465 DKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGL 524
Query: 478 AQFGCGDEALKLFTRM-RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
A+ G E+L LF M R+ V+PN + L+ VL ACSH GLV++GL + ME YGI P
Sbjct: 525 AESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKP 584
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+H +CVVDLL+R+G ++EAE+FI + + W +LL+
Sbjct: 585 KGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLS 626
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 123/520 (23%), Positives = 216/520 (41%), Gaps = 89/520 (17%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + L EAL + F + +R T+ ++ AC L LG + ++ +
Sbjct: 156 ISGFVRNGLNFEALKLF-FRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAG 214
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWT-------------------- 105
+ + + N ++ + + G ++ AR FD+M +R+VVSWT
Sbjct: 215 FEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFD 274
Query: 106 -----------AMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
AMIA SQ+ +A+KL+ +M+Q G P F + A + L ++
Sbjct: 275 EMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSA 334
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G +H HV K + ++LI +Y K + D R VF I K+V W SM+
Sbjct: 335 GINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVG---- 390
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGV 274
GY + E L + N+ SW +IAG
Sbjct: 391 -GYSINGRLEETEELFELIPEKND--------------------------VSWGTIIAGY 423
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+ + + +F+ + P+ T S+LCAC +L +GM VH IIK+G ++
Sbjct: 424 LENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDI 483
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM-L 393
V A+ MYAKC + ++ VF+ + + + +SW +I + A E LF M
Sbjct: 484 FVGTALTDMYAKCGDIGSSKQVFERMPEK-NEISWTVMIQGLAESGFAVESLILFEEMER 542
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF-----DVFVMNG------- 441
S++ P+ + V+ AC+ HC + GL + V+ +
Sbjct: 543 TSEVAPNELMLLSVLFACS-----------HCGLVDKGLWYFNSMEKVYGIKPKGKHYTC 591
Query: 442 LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYAQF 480
++D+ + G L A + + P+ +W++L+ G ++
Sbjct: 592 VVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKY 631
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 138/326 (42%), Gaps = 71/326 (21%)
Query: 317 QGMQVHSYIIKMGFD-------------------------------SNVPVCNAILTMYA 345
QG +H+++IK GF S++ V N +++ Y
Sbjct: 39 QGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYV 98
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE---------------------- 383
+ L A L+F E+ + + VSW+++I+ +++ + E
Sbjct: 99 QWGNLVQARLLFDEMPER-NEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAIS 157
Query: 384 ---------ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
E +LF R+L S ++P+ +TF V+ AC ++ + + + K G
Sbjct: 158 GFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEH 217
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
+ V N L+ + ++ G + AR++F+ ME DVVSW++++ Y + G EA ++F M
Sbjct: 218 YLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMP 277
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCV 554
N ++ ++ S G EE L L+ M E G P +C + LA +
Sbjct: 278 ----ERNEISWSAMIARYSQSGYAEEALKLFSKMVQE-GFKPNISCFACTLSALASLRAL 332
Query: 555 HEAEDF---INQMACDADIVVWKSLL 577
+ + ++ D D+ + SL+
Sbjct: 333 SAGINIHGHVTKIGIDKDVFIGSSLI 358
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 176/568 (30%), Positives = 293/568 (51%), Gaps = 43/568 (7%)
Query: 53 LGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCS 112
LGR++ ++ S + + ++N +++M G G+++ A FD+M +R+ +SW ++ A +
Sbjct: 268 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 327
Query: 113 QNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
QN ++ +++ M + T +++ + GR +H V+K S +
Sbjct: 328 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 387
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
N L+ MY R ++A VF + KD+ SW S++A+F G L+AL M+ G
Sbjct: 388 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 447
Query: 233 A--------------YQPNEFIFGSVFSACSNFARILFNEI------------------- 259
+ P+ F G + + + +N+I
Sbjct: 448 KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 507
Query: 260 ------DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI--G 311
D+ +WNALI G A + ++A++ F MR + + +TV S+L AC+ G
Sbjct: 508 RVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG 567
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
L L +G +H+YI+ GF+S+ V N+++TMYAKC L ++ +F L N + ++WN+
Sbjct: 568 DL-LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL-DNRNIITWNA 625
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
++AA H EE+ +L S+M + + D +F++ + A AK+A LE QLH K G
Sbjct: 626 MLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLG 685
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
D F+ N D+Y KCG +G K+ N + SW+ LI + G +E F
Sbjct: 686 FEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFH 745
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
M +G+ P VT V +LTACSH GLV++GL Y ++ ++G+ P EHC CV+DLL R+
Sbjct: 746 EMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRS 805
Query: 552 GCVHEAEDFINQMACDADIVVWKSLLAS 579
G + EAE FI++M + +VW+SLLAS
Sbjct: 806 GRLAEAETFISKMPMKPNDLVWRSLLAS 833
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 165/548 (30%), Positives = 279/548 (50%), Gaps = 31/548 (5%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ 113
GR VH + + V+ N ++NMY K G ++ AR FD MP RN VSW M++G +
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 114 NYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL-GRQLHAHVIKSEHGSHLI 172
+ ++ + +M G+ P F S++ AC GS+ G Q+H V KS S +
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 210
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG--------YELEALCH 224
A++ +Y + + +R VF + ++V SW S++ +S G Y+ E+L
Sbjct: 211 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESLGR 270
Query: 225 --FNEMLHHGAYQP----NEFIFGSVFSACSN--FARILFNEIDSPDLASWNALIAGVAS 276
+++ G N I S+ + N +A +F+++ D SWN++ A A
Sbjct: 271 QIIGQVVKSGLESKLAVENSLI--SMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 328
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMGFDSNVP 335
+ + E+ +FS MR + TV +LL + +G + + G +H ++KMGFDS V
Sbjct: 329 NGHIEESFRIFSLMRRFHDEVNSTTVSTLL-SVLGHVDHQKWGRGIHGLVVKMGFDSVVC 387
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
VCN +L MYA A LVFK++ D +SWNS++A+ + ++ + L M++S
Sbjct: 388 VCNTLLRMYAGAGRSVEANLVFKQM-PTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 446
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA 455
+++TF + AC E LH + +GL ++ + N L+ +Y K G + +
Sbjct: 447 GKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 506
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
R++ M DVV+W++LI GYA+ D+AL F MR GVS N +T+V VL+AC
Sbjct: 507 RRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLP 566
Query: 516 G-LVEEG--LHLYRIMENEYGIIPTREHC-SCVVDLLARAGCVHEAEDFINQMACDADIV 571
G L+E G LH Y + + EH + ++ + A+ G + ++D N + + +I+
Sbjct: 567 GDLLERGKPLHAYIVSAG----FESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNII 621
Query: 572 VWKSLLAS 579
W ++LA+
Sbjct: 622 TWNAMLAA 629
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 152/566 (26%), Positives = 263/566 (46%), Gaps = 72/566 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTY--AGLISACSSLRSL-QLGRKVHD 59
N +S + + LY E + +F + ++ I+PS++ A L++AC S+ + G +VH
Sbjct: 142 NTMMSGIVRVGLYLEGM---EFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 198
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
+ S DV + IL++YG G + +R F++MP RNVVSWT+++ G S + +
Sbjct: 199 FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 258
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
I +Y LGRQ+ V+KS S L +N+LI+
Sbjct: 259 VIDIY-------------------------KDESLGRQIIGQVVKSGLESKLAVENSLIS 293
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM----------- 228
M + A +F ++ +D SW S+ AA+++ G+ E+ F+ M
Sbjct: 294 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 353
Query: 229 -------LHHGAYQP---------NEFIFGSVFSACSNFAR------------ILFNEID 260
L H +Q + F SV C+ R ++F ++
Sbjct: 354 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 413
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ DL SWN+L+A + + +A+ L M + +T S L AC +G
Sbjct: 414 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 473
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H ++ G N + NA+++MY K + + V ++ + D V+WN++I +
Sbjct: 474 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR-DVVAWNALIGGYAEDE 532
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS-LEMVTQLHCYITKTGLAFDVFVM 439
++ F M + ++IT V+ AC LE LH YI G D V
Sbjct: 533 DPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK 592
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
N L+ +Y KCG L S++ LFN ++N ++++W++++ A G G+E LKL ++MRS GVS
Sbjct: 593 NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 652
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLY 525
+ + L+A + + ++EEG L+
Sbjct: 653 LDQFSFSEGLSAAAKLAVLEEGQQLH 678
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 217/484 (44%), Gaps = 43/484 (8%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
+ +T + L+S + + GR +H ++ V + N +L MY G +A +
Sbjct: 349 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 408
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F +MP ++++SW +++A + + DA+ L M+ SG TF S + AC
Sbjct: 409 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 468
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
GR LH V+ S + I NAL++MY K + ++R V + R+DV +W ++I +
Sbjct: 469 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 528
Query: 213 SKLGYELEALCHFNEMLHHG-----------------------------------AYQPN 237
++ +AL F M G ++ +
Sbjct: 529 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 588
Query: 238 EFIFGSV---FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
E + S+ ++ C + ++ LFN +D+ ++ +WNA++A A H + E + L S+MR
Sbjct: 589 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 648
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ D + L A L +G Q+H +K+GF+ + + NA MY+KC +
Sbjct: 649 FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE 708
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
+ + N SWN +I+A +H EE+ F ML IKP H+TF ++ AC+
Sbjct: 709 VVKMLPP-SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 767
Query: 413 KMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSW 470
++ + I + GL + ++D+ + G L A + M P+ + W
Sbjct: 768 HGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVW 827
Query: 471 SSLI 474
SL+
Sbjct: 828 RSLL 831
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 177/384 (46%), Gaps = 41/384 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++AC + + GR +H +++S + ++ N +++MYGK G + ++R +M
Sbjct: 454 TFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM 513
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC-LG 155
P+R+VV+W A+I G +++ + A+ + M GV T S++ AC G + G
Sbjct: 514 PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 573
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ LHA+++ + S +N+LI MY K + ++++F+G+ +++ +W +M+AA +
Sbjct: 574 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHH 633
Query: 216 GYELEALCHFNEMLHHG----------------------------------AYQPNEFIF 241
G+ E L ++M G ++ + FIF
Sbjct: 634 GHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIF 693
Query: 242 GS---VFSACSNFARI--LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+ ++S C + + + L SWN LI+ + H E + F EM + +
Sbjct: 694 NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIK 753
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALL 355
P +T SLL AC + +G+ + I + G + + C ++ + + L A
Sbjct: 754 PGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAET 813
Query: 356 VFKELGKNADSVSWNSIIAACLQH 379
++ + + W S++A+C H
Sbjct: 814 FISKMPMKPNDLVWRSLLASCKIH 837
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 190/591 (32%), Positives = 298/591 (50%), Gaps = 56/591 (9%)
Query: 35 PSTYAG--LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
P+TY L+ + L RK+ D + ++ N ++ Y K G+L +AR
Sbjct: 99 PNTYRSNFLVKSFLQRGDLNGARKLFDEM----PHKNIFSTNTMIMGYIKSGNLSEARTL 154
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FD M QR V+WT +I G +QN Q +A L+I+M + G+ P + +++ + SV
Sbjct: 155 FDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSV 214
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
RQ+H+HVIK + S L+ N+L+ Y K + A +F+ I +D ++ +++ +
Sbjct: 215 NEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGY 274
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC------------------SNF--- 251
SK G+ EA+ F +M G Y+P EF F ++ +A NF
Sbjct: 275 SKEGFNREAINLFFKMQEVG-YRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWN 333
Query: 252 -------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR- 291
A LF E+ D S+N L+ A + E++ LF E++
Sbjct: 334 VFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQF 393
Query: 292 ---DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
DR P +LL L L G Q+HS I S + V N+++ MYAKC
Sbjct: 394 TGFDRRNFP----FATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCG 449
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
A +F +L + SV W ++I++ +Q E+ +LF M ++I D T+ ++
Sbjct: 450 EFGEANRIFSDLAIQS-SVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIV 508
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
ACA +ASL + QLH +I +G +VF + L+D+Y KCGS+ A ++F M + V
Sbjct: 509 RACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSV 568
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
SW++LI YAQ G GD L+LF M G+ P+ V+L+ +L ACSH GLVEEGL + M
Sbjct: 569 SWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSM 628
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
Y ++P +EH + +D+L R G EAE + QM + D ++W S+L S
Sbjct: 629 TRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNS 679
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/466 (19%), Positives = 205/466 (43%), Gaps = 50/466 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ K+ EA+ + F R T+A +++A L ++ G++VH ++
Sbjct: 268 NALLTGYSKEGFNREAINLF-FKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVV 326
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+V + N +L+ Y K + +A F +MP+ + +S+ ++ + N + ++++
Sbjct: 327 KCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLE 386
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ ++ +G F F +++ + ++ +GRQ+H+ I ++ S ++ N+L+ MY
Sbjct: 387 LFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYA 446
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K +A +FS +A + W +MI+++ + G + L F EM + +
Sbjct: 447 KCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEM-QRAKIGADAATYA 505
Query: 243 SVFSACSNFARI----------------------------------------LFNEIDSP 262
S+ AC++ A + +F E+
Sbjct: 506 SIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVR 565
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+ SWNALI+ A + + + + LF EM L PD +++ S+LCAC + +G+Q
Sbjct: 566 NSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYF 625
Query: 323 SYIIKMGFDSNVPVCN---AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+ ++ VP + + M + A + ++ D + W+S++ +C H
Sbjct: 626 DSMTRIY--KLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIH 683
Query: 380 NQAEELFRLFSRMLASQIKPD---HITFNDVMGACAKMASLEMVTQ 422
E + +++ ++ D ++T +++ A + ++ V +
Sbjct: 684 KNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKK 729
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
I KTG + + N L+ +++ G L ARKLF+ M + ++ S +++I+GY + G EA
Sbjct: 92 IIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEA 151
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
LF M VT ++ + E L+ I +GI P + ++
Sbjct: 152 RTLFDSM----FQRTAVTWTMLIGGYAQNNQFREAFGLF-IEMGRHGIDPDHVSLATLLS 206
Query: 547 LLARAGCVHEAEDF---INQMACDADIVVWKSLLAS 579
V+E + ++ D+ +VV SLL S
Sbjct: 207 GFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDS 242
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 170/524 (32%), Positives = 275/524 (52%), Gaps = 42/524 (8%)
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP RN VS+ +I G Q++Q ++ + L+ ++ + G F F +I+K + L
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
LHA + K H S+ ALI Y + AR F IA KD+ SW M+A +++
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--------------------------- 248
++L F EM G + PN F F V AC
Sbjct: 121 DRFQDSLQLFAEMRMVG-FNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYV 179
Query: 249 -------------SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+N +F E+ D+ W+ +I+ A + + EA+ LF +MR +
Sbjct: 180 GVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFV 239
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
LP+ T S+L +C L G QVH +++K+G D NV V NA++ +YAKC L N++
Sbjct: 240 LPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMK 299
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F EL N + V+WN++I +Q ++ L+ ML Q++ +T++ V+ ACA +A
Sbjct: 300 LFMEL-PNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLA 358
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
++E+ TQ+H KT DV V N L+D+Y KCGS+ +AR +F+ + D +SW+++I
Sbjct: 359 AMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMIS 418
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
GY+ G EALK F M+ PN +T V +L+ACS+ GL++ G + ++ M +YGI
Sbjct: 419 GYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIE 478
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P EH +C+V LL R+G + +A I ++ + ++ VW++LL +
Sbjct: 479 PCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGA 522
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 203/428 (47%), Gaps = 42/428 (9%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+ P + ++ S+ +L +H I + + + +++ Y CGS+ AR
Sbjct: 38 ELNPFVFTTILKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQ 97
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD + +++VSWT M+A ++N + D+++L+ +M G P FTF ++KAC GL +
Sbjct: 98 AFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEA 157
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+G+ +H V+K+ + L L+ +YTKF D VF + + DV W MI+
Sbjct: 158 FSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISR 217
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------------- 254
+++ EA+ F +M PN+F F SV +C++ +
Sbjct: 218 YAQSNQSREAVELFGQM-RRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDG 276
Query: 255 -----------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
LF E+ + + +WN +I G + ++A+SL+ M
Sbjct: 277 NVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNML 336
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ ++ +T S+L AC + G Q+HS +K +D +V V NA++ MYAKC +
Sbjct: 337 ECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIK 396
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
NA LVF L + D +SWN++I+ H E + F M ++ P+ +TF ++ AC
Sbjct: 397 NARLVFDMLSER-DEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSAC 455
Query: 412 AKMASLEM 419
+ L++
Sbjct: 456 SNAGLLDI 463
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 208/435 (47%), Gaps = 54/435 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+AG++ AC L + +G+ VH +L + + D+ + +L++Y K G D F++M
Sbjct: 144 TFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEM 203
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+ +V+ W+ MI+ +Q+ Q +A++L+ QM ++ V+P QFTF S++++C+ + ++ LG+
Sbjct: 204 PKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGK 263
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H HV+K ++ NAL+ +Y K R+ ++ +F + ++ +W +MI + + G
Sbjct: 264 QVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSG 323
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+AL + ML Q +E + SV AC++
Sbjct: 324 DGDKALSLYKNML-ECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVG 382
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR++F+ + D SWNA+I+G + H EA+ F M++ E +
Sbjct: 383 NALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECV 442
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC----NAILTMYAKCSVLCN 352
P+ LT S+L AC L G +Y M D + C ++ + + L
Sbjct: 443 PNKLTFVSILSACSNAGLLDIG---QNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDK 499
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD----HITFNDVM 408
A+ + +E+ + W +++ AC+ HN + + S QI P H+ +++
Sbjct: 500 AVKLIEEIPLEPNVKVWRALLGACVIHNDVD--LGIMSAQQILQIDPQDEATHVLLSNIY 557
Query: 409 GACAKMASLEMVTQL 423
+ S+ V +
Sbjct: 558 ARTRRWNSVASVRKF 572
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 174/563 (30%), Positives = 282/563 (50%), Gaps = 67/563 (11%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
L+ R++ D I L++ +V N +L+M+ K G L DAR F +MP+R+ VSWT M+ G
Sbjct: 81 LRDARRLFDEIPLAR--RNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVG 138
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
++ + +AIK + M G P QFT +++ +C+ + +GR++H+ V+K GS
Sbjct: 139 LNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSC 198
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
+ N+++ MY K A VF + + V+SW +M++ + LG
Sbjct: 199 VPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGR------------- 245
Query: 231 HGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ A LF + + SWNA+IAG + +A+ LFS M
Sbjct: 246 ------------------MDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRM 287
Query: 291 -RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
+ + PD T+ S+L AC + G QVH+YI++ N V NA+++ YAK
Sbjct: 288 LHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGS 347
Query: 350 LCNALLVFKE--------------------------------LGKNADSVSWNSIIAACL 377
+ NA + + + N D V+W ++I
Sbjct: 348 VENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYE 407
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
Q+ + +E LF M+ +P+ T V+ CA +A L+ Q+HC ++ L
Sbjct: 408 QNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSS 467
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFM-ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
V N ++ +Y + GS AR++F+ + + ++W+S+I+ AQ G G+EA+ LF M
Sbjct: 468 VSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRA 527
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
GV P+ +T VGVL+ACSH G V EG Y ++NE+ I P H +C+VDLLARAG E
Sbjct: 528 GVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSE 587
Query: 557 AEDFINQMACDADIVVWKSLLAS 579
A++FI +M + D + W SLL++
Sbjct: 588 AQEFIRRMPVEPDAIAWGSLLSA 610
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 218/493 (44%), Gaps = 124/493 (25%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHIL---LSKCQPDVVLQNHILNMYGKCGSLEDA---- 89
T ++S+C+ ++ +GRKVH ++ L C P + N +LNMYGKCG E A
Sbjct: 166 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVP---VANSVLNMYGKCGDAETASTVF 222
Query: 90 ----------------------RMG-----FDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
RM F+ MP R++VSW AMIAG +QN + A+K
Sbjct: 223 ERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALK 282
Query: 123 LYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
L+ +ML +S + P +FT S++ AC+ LG+V +G+Q+HA+++++E + NALI+ Y
Sbjct: 283 LFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTY 342
Query: 182 TK------FDRILD---------------------------ARNVFSGIARKDVTSWGSM 208
K RI+D AR +F + +DV +W +M
Sbjct: 343 AKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAM 402
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------ 250
I + + G EA+ F M+ G +PN + +V S C++
Sbjct: 403 IVGYEQNGRNDEAIDLFRSMITCGP-EPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL 461
Query: 251 ----------------------FARILFNEI-DSPDLASWNALIAGVASHSNANEAMSLF 287
+AR +F+++ + +W ++I +A H EA+ LF
Sbjct: 462 LERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLF 521
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII---KMGFDSNVPVCNAILTMY 344
EM + PD +T +L AC + +G + + I ++ + + C ++ +
Sbjct: 522 EEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYAC--MVDLL 579
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD---- 400
A+ + A + + D+++W S+++AC H A EL L + L S I P+
Sbjct: 580 ARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNA-ELAELAAEKLLS-IDPNNSGA 637
Query: 401 HITFNDVMGACAK 413
+ +V AC +
Sbjct: 638 YSAIANVYSACGR 650
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 190/414 (45%), Gaps = 66/414 (15%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK- 95
T ++SAC++L ++++G++VH +IL ++ + + N +++ Y K GS+E+AR D+
Sbjct: 299 TITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQS 358
Query: 96 --------------------------------MPQRNVVSWTAMIAGCSQNYQENDAIKL 123
M R+VV+WTAMI G QN + ++AI L
Sbjct: 359 METDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDL 418
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ M+ G P +T +++ C+ L + G+Q+H I+S NA+I MY +
Sbjct: 419 FRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYAR 478
Query: 184 FDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
AR +F + RK+ +W SMI A ++ G EA+ F EML G +P+ +
Sbjct: 479 SGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGV-EPDRITYV 537
Query: 243 SVFSACS-----NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
V SACS N + +++I +P+++ + ++ +A +EA M
Sbjct: 538 GVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRM-- 595
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK--MGFD-SNVPVCNAILTMYAKCSV 349
+ PD + SLL AC +++ ++ + + D +N +AI +Y+ C
Sbjct: 596 -PVEPDAIAWGSLLSAC----RVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGR 650
Query: 350 LCNALLVFKELGKNA----DSVSWNSIIAAC-------LQHNQAEELFRLFSRM 392
+A ++K + A SW I + + H Q + ++ + +RM
Sbjct: 651 WSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARM 704
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 141/332 (42%), Gaps = 76/332 (22%)
Query: 318 GMQVHSYIIKMGFDSNVPVCNAIL------------------------------------ 341
G +H+ +K G ++ +CN +L
Sbjct: 45 GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSL 104
Query: 342 -TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+M+AK L +A VF E+ + D+VSW ++ + + E + M A P
Sbjct: 105 LSMFAKSGRLADARGVFAEMPER-DAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPT 163
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS--------- 451
T +V+ +CA + + ++H ++ K GL V V N ++++Y KCG
Sbjct: 164 QFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFE 223
Query: 452 -------------------LGS---ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
LG A LF M +VSW+++I GY Q G +ALKL
Sbjct: 224 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKL 283
Query: 490 FTRM-RSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVD 546
F+RM ++P+ T+ VL+AC+++G V G +H Y I+ E + + ++
Sbjct: 284 FSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAY-ILRTEMAY--NSQVTNALIS 340
Query: 547 LLARAGCVHEAEDFINQ-MACDADIVVWKSLL 577
A++G V A ++Q M D +++ + +LL
Sbjct: 341 TYAKSGSVENARRIMDQSMETDLNVISFTALL 372
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 101/191 (52%), Gaps = 23/191 (12%)
Query: 35 PSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
P++Y A ++S C+SL L G+++H + S + + N I+ MY + GS AR
Sbjct: 429 PNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRM 488
Query: 93 FDKMPQRN-VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD++ R ++WT+MI +Q+ Q +A+ L+ +ML++GV P + T+ ++ ACS G
Sbjct: 489 FDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGF 548
Query: 152 VCLGRQLHAHVIKSEHG-----SH------LIAQNALIAMYTKFDRILDARNVFSGIARK 200
V G++ + IK+EH SH L+A+ L + +F R +
Sbjct: 549 VNEGKRYYDQ-IKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMP--------VEP 599
Query: 201 DVTSWGSMIAA 211
D +WGS+++A
Sbjct: 600 DAIAWGSLLSA 610
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 185/583 (31%), Positives = 293/583 (50%), Gaps = 44/583 (7%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSK--CQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
A L+ C + + GR VH ++ Q D N +LN+Y K G L AR FD M
Sbjct: 51 ARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGM 110
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+RN+VS+ ++ G + +A L+ ++ + G F +I+K + + L
Sbjct: 111 PERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTC 170
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+HA K H + ++LI Y+ + AR VF GI KD +W +M++ +S+
Sbjct: 171 CIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSEND 230
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSA---------------CS------------ 249
+AL F++M GA +PN F+ SV A C+
Sbjct: 231 IPEDALNTFSKMRMAGA-KPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVG 289
Query: 250 -------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR +F I D+ W+ LI+ A +A +F M ++
Sbjct: 290 GALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVV 349
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P+ ++ +L AC L G Q+H+ +IK+G++S + V NA++ +YAKC + N+L +
Sbjct: 350 PNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEI 409
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F+ L ++A+ VSWN+II Q AE+ +F M A+ + +TF+ V+ ACA AS
Sbjct: 410 FRSL-RDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTAS 468
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
++ Q+H I K+ D V N L+D Y KCG + A K+F + DVVSW+++I G
Sbjct: 469 IKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISG 528
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
YA G +AL+LF RM PN VT V +L+ C GLV +GL L+ M ++ I P
Sbjct: 529 YALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKP 588
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ +H +C+V LL RAG +++A FI + +VW++LL+S
Sbjct: 589 SMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSS 631
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 203/444 (45%), Gaps = 45/444 (10%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P ++ A L S LG+ +H + + C + + +L+MY KCG +EDAR F+
Sbjct: 251 PFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFE 310
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+P +V+ W+ +I+ +Q+YQ A +++++M++S V+P +F+ +++AC+ + + L
Sbjct: 311 IIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDL 370
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+Q+H VIK + S L NAL+ +Y K + ++ +F + + SW ++I + +
Sbjct: 371 GQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQ 430
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------------- 254
G+ +AL F EM + F SV AC+N A I
Sbjct: 431 SGFAEDALSVFQEM-RAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTI 489
Query: 255 --------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+F I D+ SWNA+I+G A H A +A+ LF+ M +
Sbjct: 490 VCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSD 549
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
P+ +T +LL C + QG+ + +S + ++ I+ + + L +A
Sbjct: 550 TKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDA 609
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP-DHITFNDVMGACA 412
L ++ + W +++++C+ H FS +I+P D T+ + A
Sbjct: 610 LKFIGDIPSTPSPMVWRALLSSCVVHKNVA--LGKFSAEKVLEIEPQDETTYVLLSNMYA 667
Query: 413 KMASLEMVTQLHCYITKTGLAFDV 436
L+ V L + G+ +V
Sbjct: 668 AAGILDQVALLRKSMRNIGVKKEV 691
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 137/306 (44%), Gaps = 13/306 (4%)
Query: 280 ANEAMSLFSEMRDRELLP--DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV- 336
AN A+ + LP D LL CI R G VH+ +++ G + +
Sbjct: 26 ANAALQWLDDELASLALPKLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTF 85
Query: 337 -CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
N +L +YAK L A +F + + + VS+ +++ EE LF R+
Sbjct: 86 CANVLLNLYAKLGPLAAARRLFDGMPER-NMVSFVTLVQGYALRGGFEEAAGLFRRLQRE 144
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA 455
+ +H ++ M + + +H K G + FV + L+D Y CG++ A
Sbjct: 145 GHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHA 204
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA--CS 513
R +F+ + D V+W++++ Y++ ++AL F++MR G PN L VL A C
Sbjct: 205 RCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCL 264
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHC-SCVVDLLARAGCVHEAEDFINQMACDADIVV 572
++ +G+H + + T H ++D+ A+ G + +A + D D+++
Sbjct: 265 SSAVLGKGIHGCAVKT----LCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHD-DVIL 319
Query: 573 WKSLLA 578
W L++
Sbjct: 320 WSFLIS 325
>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
Length = 767
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 191/600 (31%), Positives = 312/600 (52%), Gaps = 59/600 (9%)
Query: 34 RPSTYAG--LISACSSLRSLQLGRKVHDHIL---LSKCQPDVVLQNHILNMYGKCGSLED 88
RPS + + SA + L +L +G VH + + L + V + + ++ MY +CGS+ D
Sbjct: 104 RPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRD 163
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS----GVMPGQFTFGSIIK 144
A FD+MP+R+VV+WTA+I+GC N Q + + ++M++S G P T S ++
Sbjct: 164 AVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLE 223
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
AC LG + +G LH +K+ G ++L +MYTK D DAR +F + KD+ S
Sbjct: 224 ACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVS 283
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI------------------------ 240
W S+I A+ + G+ +A+ F M G QP+E +
Sbjct: 284 WTSLIGAYCRAGHAEKAVELFLGMEESG-LQPDEVVISCLLAGLGNDAKVRGGKTFHAAI 342
Query: 241 ----FG----------SVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
FG S+++ C + A +F + D SW++++ + +
Sbjct: 343 VRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCL 402
Query: 285 SLFSEM--RDR---ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
L+ EM RD+ E + L C+ +GRL L G H Y IK N V NA
Sbjct: 403 ELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRL--GQSAHCYSIKHLAGENSSVANA 460
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
+++MY +C A +F + K D V+W+++I++ +++ L+ +ML +KP
Sbjct: 461 LISMYGRCGNFDVARKIFGMV-KTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKP 519
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
+ T V+ +CA +A+LE +H ++ GL D+ + L+D+Y+KCG LG ARK+F
Sbjct: 520 NSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMF 579
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ M DVV+W+ +I GY G +ALKLF+ M V PN +T + +L+AC H GLV+
Sbjct: 580 DSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVD 639
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+G L+ ME EY + P +H +C+VDLL ++G + EAED ++ M + D +W +LL +
Sbjct: 640 KGRELFTRME-EYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGA 698
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/498 (25%), Positives = 232/498 (46%), Gaps = 54/498 (10%)
Query: 25 SQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQ--PDVVLQNHILNMYGK 82
S + R T + AC L L +G +H + + P VV + + +MY K
Sbjct: 205 SAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVV--SSLFSMYTK 262
Query: 83 CGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI 142
C S EDAR+ F ++P++++VSWT++I + A++L++ M +SG+ P + +
Sbjct: 263 CDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCL 322
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
+ V G+ HA +++ G ++ NALI+MY K ++ A VF + ++D
Sbjct: 323 LAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDT 382
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG-------------------- 242
SW SM+ A+ K G +L+ L + EM +EF +
Sbjct: 383 DSWSSMVVAYCKAGLDLKCLELYREMQFR---DKDEFEYDTNSLISIISSCSRLGRLRLG 439
Query: 243 -----------------------SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASH 277
S++ C NF AR +F + + D+ +W+ALI+ +
Sbjct: 440 QSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHL 499
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
++ +A+ L+ +M + P+ T+ S++ +C L G +HS++ +G + ++ +C
Sbjct: 500 GHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSIC 559
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
A++ MY KC L A +F + + D V+WN +I+ H +A + +LFS M +
Sbjct: 560 TALVDMYMKCGQLGIARKMFDSMLER-DVVTWNVMISGYGMHGEAIQALKLFSMMERGNV 618
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
KP+ +TF ++ AC ++ +L + + L ++ ++D+ K G L A
Sbjct: 619 KPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAED 678
Query: 458 LFNFME-NPDVVSWSSLI 474
+ + M PD W +L+
Sbjct: 679 VVSAMPIEPDGGIWGTLL 696
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 240/531 (45%), Gaps = 52/531 (9%)
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P + W +++ + + + +M SG P +FT + A + LG++ +G
Sbjct: 68 PCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGA 127
Query: 157 QLHAHVIKS---EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
+HA+ ++ E + ++L+ MY + + DA +F + +DV +W ++I+
Sbjct: 128 AVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCV 187
Query: 214 KLGYELEALCHFNEMLH---HGAYQPNEFIFGSVFSAC---------------------- 248
G E L + M+ G +PN S AC
Sbjct: 188 CNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVG 247
Query: 249 ------------------SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ ARILF E+ DL SW +LI +A +A+ LF M
Sbjct: 248 HCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGM 307
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ L PD + + LL + G H+ I++ F +V + NA+++MYAKC +
Sbjct: 308 EESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQV 367
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHN---QAEELFRLFSRMLASQIKPDHITFNDV 407
A VF+ L + D+ SW+S++ A + + EL+R + + D + +
Sbjct: 368 DIAATVFRMLHQR-DTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISI 426
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
+ +C+++ L + HCY K + V N L+ +Y +CG+ ARK+F ++ DV
Sbjct: 427 ISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDV 486
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
V+WS+LI Y+ G +AL L+ +M + GV PN TLV V+++C+++ +E G L
Sbjct: 487 VTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHG-ELIHS 545
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ G+ C+ +VD+ + G + A + M + D+V W +++
Sbjct: 546 HVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSM-LERDVVTWNVMIS 595
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 140/283 (49%), Gaps = 13/283 (4%)
Query: 48 LRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAM 107
L L+LG+ H + + + + N +++MYG+CG+ + AR F + ++VV+W+A+
Sbjct: 433 LGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSAL 492
Query: 108 IAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
I+ S DA+ LY QML GV P T S+I +C+ L ++ G +H+HV
Sbjct: 493 ISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGL 552
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
L AL+ MY K ++ AR +F + +DV +W MI+ + G ++AL F+
Sbjct: 553 ECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFS- 611
Query: 228 MLHHGAYQPNEFIFGSVFSACS-----NFARILFNEID----SPDLASWNALIAGVASHS 278
M+ G +PN F ++ SAC + R LF ++ P+L + ++ +
Sbjct: 612 MMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSG 671
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
+ EA + S M + PDG +LL AC G++V
Sbjct: 672 HLQEAEDVVSAM---PIEPDGGIWGTLLGACKMHDNFEMGLRV 711
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 2/207 (0%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+SS +AL+ YD ++ +T +IS+C++L +L+ G +H H+
Sbjct: 493 ISSYSHLGHSKDALLLYD-QMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVG 551
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ D+ + +++MY KCG L AR FD M +R+VV+W MI+G + + A+KL+
Sbjct: 552 LECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFS 611
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M + V P TF +I+ AC G V GR+L + + +L ++ + K
Sbjct: 612 MMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSG 671
Query: 186 RILDARNVFSGIA-RKDVTSWGSMIAA 211
+ +A +V S + D WG+++ A
Sbjct: 672 HLQEAEDVVSAMPIEPDGGIWGTLLGA 698
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 188/611 (30%), Positives = 306/611 (50%), Gaps = 72/611 (11%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILL--SKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+ ++ A + ++ L LG+++H H+ V + N ++NMYGKCG L DA FD+
Sbjct: 13 FPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDR 72
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL---GSV 152
+ +R+ VSW ++I+ + + AIK + ML G P FT S+ ACS L +
Sbjct: 73 ITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGL 132
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
LG+Q+H + H + NAL+AMY K R+ DA+++ +D+ +W SMI++F
Sbjct: 133 WLGKQIHGCCFRKGHW-RTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSF 191
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------- 251
S+ +EAL M+ G +P+ F SV ACS+
Sbjct: 192 SQNERFMEALMFLRLMVLEGV-KPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIE 250
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
R++F+ + + WNA+IAG A + +A+ LF EM
Sbjct: 251 NSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEME 310
Query: 292 DRE-LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
L + T+ S++ A + + + +H Y+IK G ++N + NA++ MY++ +
Sbjct: 311 AAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDI 370
Query: 351 CNALLVFKELGKNADSVSWNSIIAA---CLQHNQAEELFRLFSRMLASQ----------- 396
+ +F + ++ D VSWN+II + C + + A L R+
Sbjct: 371 KTSKRIFDSM-EDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQ 429
Query: 397 --IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
KP+ IT V+ CA +++L ++H Y + LA V V + L+D+Y KCG L
Sbjct: 430 VPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNL 489
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG-----VSPNLVTLVGVL 509
AR++F+ M +V++W+ +I+ Y G G E+L+LF M + G V P VT + +
Sbjct: 490 ARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALF 549
Query: 510 TACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
+CSH G+V+EGL L+ M+NE+GI P +H +C+VDL+ RAG V EA +N M D
Sbjct: 550 ASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFD 609
Query: 570 IV-VWKSLLAS 579
V W SLL +
Sbjct: 610 KVGAWSSLLGA 620
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/515 (26%), Positives = 234/515 (45%), Gaps = 70/515 (13%)
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG--SHLIAQNALIAMYTKF 184
M+ SG P F F +++KA +G+ + LG+Q+HAHV K +G S + N L+ MY K
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ DA VF I +D SW S+I+A + A+ F ML G ++P+ F S+
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEG-FEPSSFTLVSM 119
Query: 245 FSACSNF------------------------------------------ARILFNEIDSP 262
ACSN A+ L +
Sbjct: 120 ALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDR 179
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
DL +WN++I+ + + EA+ M + PDG+T S+L AC L G ++H
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIH 239
Query: 323 SYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
+Y ++ N V +A++ MY C + + LVF + + WN++IA Q
Sbjct: 240 AYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGL-WNAMIAGYAQSEH 298
Query: 382 AEELFRLFSRM-LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
E+ LF M A+ + + T + ++ A + + +H Y+ K GL + ++ N
Sbjct: 299 DEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQN 358
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM------- 493
L+D+Y + G + +++++F+ ME+ D+VSW+++I Y G +AL L M
Sbjct: 359 ALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKS 418
Query: 494 ---------RSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCS 542
+ + PN +TL+ VL C+ + + +G +H Y I + S
Sbjct: 419 TYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTV---GS 475
Query: 543 CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+VD+ A+ GC++ A +QM +++ W ++
Sbjct: 476 ALVDMYAKCGCLNLARRVFDQMPI-RNVITWNVII 509
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 151/602 (25%), Positives = 259/602 (43%), Gaps = 111/602 (18%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLIS---ACSSLRS---LQLGRK 56
N +S+LC+ + A+ A+ PS++ L+S ACS+LR L LG++
Sbjct: 82 NSIISALCRFEEWEVAIKAFRLMLMEG---FEPSSFT-LVSMALACSNLRKRDGLWLGKQ 137
Query: 57 VHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQ 116
+H K N ++ MY K G L+DA+ R++V+W +MI+ SQN +
Sbjct: 138 IHG-CCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNER 196
Query: 117 ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG-SHLIAQN 175
+A+ M+ GV P TF S++ ACS L + G+++HA+ ++++ + +
Sbjct: 197 FMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGS 256
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
AL+ MY ++ R VF + + + W +MIA +++ ++ +AL F EM
Sbjct: 257 ALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLY 316
Query: 236 PNEFIFGSVFSA---CSNFARI-------------------------------------L 255
N S+ A C +R +
Sbjct: 317 SNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRI 376
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE----------------LLPDG 299
F+ ++ D+ SWN +I +++A+ L EM+ E P+
Sbjct: 377 FDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNS 436
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+T+ ++L C L +G ++H+Y I+ S V V +A++ MYAKC L A VF +
Sbjct: 437 ITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQ 496
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS-----QIKPDHITFNDVMGACAKM 414
+ + ++WN II A H + +E LF M+A ++KP +TF + +C+
Sbjct: 497 MPIR-NVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHS 555
Query: 415 ASL-EMVTQLH----------------CYITKTGLAFDVFVMNGLMDI----YIKCGS-- 451
+ E ++ H C + G A V GL++ + K G+
Sbjct: 556 GMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWS 615
Query: 452 --LGSARKLFNF------MEN-----PDVVSWSSLILG-YAQFGCGDEALKLFTRMRSLG 497
LG+ R N EN PDV S L+ Y+ G D+A+ L RM+++G
Sbjct: 616 SLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMG 675
Query: 498 VS 499
V
Sbjct: 676 VK 677
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 142/289 (49%), Gaps = 12/289 (4%)
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS--NVPVCNAILTMYAKCSVLCNAL 354
PD ++L A G LY G Q+H+++ K G+ S +V + N ++ MY KC L +A
Sbjct: 8 PDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAY 67
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA-- 412
VF + + D VSWNSII+A + + E + F ML +P T + AC+
Sbjct: 68 KVFDRITER-DQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNL 126
Query: 413 -KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
K L + Q+H + G + F N LM +Y K G L A+ L E+ D+V+W+
Sbjct: 127 RKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWN 185
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIME 529
S+I ++Q EAL M GV P+ VT VL ACSH+ L+ G +H Y +
Sbjct: 186 SMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRT 245
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++ +I S +VD+ G V E+ + D I +W +++A
Sbjct: 246 DD--VIENSFVGSALVDMYCNCGQV-ESGRLVFDSVLDRKIGLWNAMIA 291
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 101/195 (51%), Gaps = 12/195 (6%)
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA--FDVFVMNGLMDIYIKC 449
M+ S PD+ F V+ A A + L + Q+H ++ K G V + N L+++Y KC
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
G LG A K+F+ + D VSW+S+I +F + A+K F M G P+ TLV +
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120
Query: 510 TACSHVGLVEEGLHLYRIMENEYGIIPTREHC-----SCVVDLLARAGCVHEAEDFINQM 564
ACS++ +GL L + + +G + H + ++ + A+ G + +A+ + +
Sbjct: 121 LACSNL-RKRDGLWLGKQI---HGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLL-VL 175
Query: 565 ACDADIVVWKSLLAS 579
D D+V W S+++S
Sbjct: 176 FEDRDLVTWNSMISS 190
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 184/578 (31%), Positives = 283/578 (48%), Gaps = 68/578 (11%)
Query: 38 YAGLISACSS---LRSLQLGRKVHDHILLSKCQ-PDVVLQNHILNMYGKCGSLEDARMGF 93
YA ++S+ + +++ VH IL + Q P L NH+L Y K G L AR F
Sbjct: 12 YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71
Query: 94 DKMP-------------------------------QRNVVSWTAMIAGCSQNYQENDAIK 122
D+MP +R+ VS+ A+I G S +++
Sbjct: 72 DEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQ 131
Query: 123 LYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
LY +L + V P + T ++I S L LG +H V++ G++ + L+ MY
Sbjct: 132 LYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMY 191
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K I DAR VF + K V + ++I + C E
Sbjct: 192 AKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR--------CKMIED------------- 230
Query: 242 GSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
A+ LF + D +W ++ G+ + EA+ +F MR + D T
Sbjct: 231 ----------AKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
S+L AC L +G Q+H+YI + ++ NV V +A++ MY+KC + A VF+ +
Sbjct: 281 FGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM- 339
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
+ +SW ++I Q+ +EE R FS M IKPD T V+ +CA +ASLE
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
Q HC +GL + V N L+ +Y KCGS+ A +LF+ M D VSW++L+ GYAQFG
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC 541
E + LF +M + G+ P+ VT +GVL+ACS GLVE+G + M+ ++GI+P +H
Sbjct: 460 KAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHY 519
Query: 542 SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+C++DL +R+G EAE+FI QM D W +LL+S
Sbjct: 520 TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 132/245 (53%), Gaps = 2/245 (0%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
V+ L + L EAL + + I T+ +++AC +L +L+ G+++H +I +
Sbjct: 250 VTGLTQNGLQLEALDVFR-RMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTW 308
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ +V + + +++MY KC S+ A F +M RN++SWTAMI G QN +A++ +
Sbjct: 309 YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFS 368
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M G+ P FT GS+I +C+ L S+ G Q H + S ++ NAL+ +Y K
Sbjct: 369 EMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG 428
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I DA +F ++ D SW +++ +++ G E + F +ML +G +P+ F V
Sbjct: 429 SIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANG-LKPDGVTFIGVL 487
Query: 246 SACSN 250
SACS
Sbjct: 488 SACSR 492
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 124/273 (45%), Gaps = 44/273 (16%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+P T +IS+C++L SL+ G + H L+S + + N ++ +YGKCGS+EDA
Sbjct: 375 IKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAH 434
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+M + VSWTA++ G +Q + + I L+ +ML +G+ P TF ++ ACS G
Sbjct: 435 RLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAG 494
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
V G + ++ +HG I + YT MI
Sbjct: 495 LVEKGCD-YFDSMQKDHGIVPIDDH-----YT------------------------CMID 524
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--------SNFARILFNEIDSP 262
+S+ G EA +M H P+ F + ++ S+C +A E D
Sbjct: 525 LYSRSGRFKEAEEFIKQMPH----SPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQ 580
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+ AS+ L + A+ E L MRDR++
Sbjct: 581 NPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQV 613
>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
Length = 897
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 191/600 (31%), Positives = 312/600 (52%), Gaps = 59/600 (9%)
Query: 34 RPSTYAG--LISACSSLRSLQLGRKVHDHIL---LSKCQPDVVLQNHILNMYGKCGSLED 88
RPS + + SA + L +L +G VH + + L + V + + ++ MY +CGS+ D
Sbjct: 104 RPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRD 163
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS----GVMPGQFTFGSIIK 144
A FD+MP+R+VV+WTA+I+GC N Q + + ++M++S G P T S ++
Sbjct: 164 AVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLE 223
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
AC LG + +G LH +K+ G ++L +MYTK D DAR +F + KD+ S
Sbjct: 224 ACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVS 283
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI------------------------ 240
W S+I A+ + G+ +A+ F M G QP+E +
Sbjct: 284 WTSLIGAYCRAGHAEKAVELFLGMEESG-LQPDEVVISCLLAGLGNDAKVRGGKTFHAAI 342
Query: 241 ----FG----------SVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
FG S+++ C + A +F + D SW++++ + +
Sbjct: 343 VRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCL 402
Query: 285 SLFSEM--RDR---ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
L+ EM RD+ E + L C+ +GRL L G H Y IK N V NA
Sbjct: 403 ELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRL--GQSAHCYSIKHLAGENSSVANA 460
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
+++MY +C A +F + K D V+W+++I++ +++ L+ +ML +KP
Sbjct: 461 LISMYGRCGNFDVARKIFGMV-KTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKP 519
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
+ T V+ +CA +A+LE +H ++ GL D+ + L+D+Y+KCG LG ARK+F
Sbjct: 520 NSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMF 579
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ M DVV+W+ +I GY G +ALKLF+ M V PN +T + +L+AC H GLV+
Sbjct: 580 DSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVD 639
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+G L+ ME EY + P +H +C+VDLL ++G + EAED ++ M + D +W +LL +
Sbjct: 640 KGRELFTRME-EYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGA 698
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/498 (25%), Positives = 232/498 (46%), Gaps = 54/498 (10%)
Query: 25 SQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQ--PDVVLQNHILNMYGK 82
S + R T + AC L L +G +H + + P VV + + +MY K
Sbjct: 205 SAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVV--SSLFSMYTK 262
Query: 83 CGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI 142
C S EDAR+ F ++P++++VSWT++I + A++L++ M +SG+ P + +
Sbjct: 263 CDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCL 322
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
+ V G+ HA +++ G ++ NALI+MY K ++ A VF + ++D
Sbjct: 323 LAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDT 382
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG-------------------- 242
SW SM+ A+ K G +L+ L + EM +EF +
Sbjct: 383 DSWSSMVVAYCKAGLDLKCLELYREMQFR---DKDEFEYDTNSLISIISSCSRLGRLRLG 439
Query: 243 -----------------------SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASH 277
S++ C NF AR +F + + D+ +W+ALI+ +
Sbjct: 440 QSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHL 499
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
++ +A+ L+ +M + P+ T+ S++ +C L G +HS++ +G + ++ +C
Sbjct: 500 GHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSIC 559
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
A++ MY KC L A +F + + D V+WN +I+ H +A + +LFS M +
Sbjct: 560 TALVDMYMKCGQLGIARKMFDSMLER-DVVTWNVMISGYGMHGEAIQALKLFSMMERGNV 618
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
KP+ +TF ++ AC ++ +L + + L ++ ++D+ K G L A
Sbjct: 619 KPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAED 678
Query: 458 LFNFME-NPDVVSWSSLI 474
+ + M PD W +L+
Sbjct: 679 VVSAMPIEPDGGIWGTLL 696
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 240/531 (45%), Gaps = 52/531 (9%)
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P + W +++ + + + +M SG P +FT + A + LG++ +G
Sbjct: 68 PCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGA 127
Query: 157 QLHAHVIKS---EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
+HA+ ++ E + ++L+ MY + + DA +F + +DV +W ++I+
Sbjct: 128 AVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCV 187
Query: 214 KLGYELEALCHFNEMLH---HGAYQPNEFIFGSVFSAC---------------------- 248
G E L + M+ G +PN S AC
Sbjct: 188 CNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVG 247
Query: 249 ------------------SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ ARILF E+ DL SW +LI +A +A+ LF M
Sbjct: 248 HCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGM 307
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ L PD + + LL + G H+ I++ F +V + NA+++MYAKC +
Sbjct: 308 EESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQV 367
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHN---QAEELFRLFSRMLASQIKPDHITFNDV 407
A VF+ L + D+ SW+S++ A + + EL+R + + D + +
Sbjct: 368 DIAATVFRMLHQR-DTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISI 426
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
+ +C+++ L + HCY K + V N L+ +Y +CG+ ARK+F ++ DV
Sbjct: 427 ISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDV 486
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
V+WS+LI Y+ G +AL L+ +M + GV PN TLV V+++C+++ +E G L
Sbjct: 487 VTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHG-ELIHS 545
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ G+ C+ +VD+ + G + A + M + D+V W +++
Sbjct: 546 HVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSM-LERDVVTWNVMIS 595
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 140/283 (49%), Gaps = 13/283 (4%)
Query: 48 LRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAM 107
L L+LG+ H + + + + N +++MYG+CG+ + AR F + ++VV+W+A+
Sbjct: 433 LGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSAL 492
Query: 108 IAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
I+ S DA+ LY QML GV P T S+I +C+ L ++ G +H+HV
Sbjct: 493 ISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGL 552
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
L AL+ MY K ++ AR +F + +DV +W MI+ + G ++AL F+
Sbjct: 553 ECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFS- 611
Query: 228 MLHHGAYQPNEFIFGSVFSACS-----NFARILFNEID----SPDLASWNALIAGVASHS 278
M+ G +PN F ++ SAC + R LF ++ P+L + ++ +
Sbjct: 612 MMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSG 671
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
+ EA + S M + PDG +LL AC G++V
Sbjct: 672 HLQEAEDVVSAM---PIEPDGGIWGTLLGACKMHDNFEMGLRV 711
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
+AL+ YD ++ +T +IS+C++L +L+ G +H H+ + D+ +
Sbjct: 503 KDALLLYD-QMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTA 561
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
+++MY KCG L AR FD M +R+VV+W MI+G + + A+KL+ M + V P
Sbjct: 562 LVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPN 621
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
TF +I+ AC G V GR+L + + +L ++ + K + +A +V S
Sbjct: 622 SLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVS 681
Query: 196 GIA-RKDVTSWGSMIAA 211
+ D WG+++ A
Sbjct: 682 AMPIEPDGGIWGTLLGA 698
>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
Length = 918
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 191/600 (31%), Positives = 312/600 (52%), Gaps = 59/600 (9%)
Query: 34 RPSTYAG--LISACSSLRSLQLGRKVHDHIL---LSKCQPDVVLQNHILNMYGKCGSLED 88
RPS + + SA + L +L +G VH + + L + V + + ++ MY +CGS+ D
Sbjct: 104 RPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRD 163
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS----GVMPGQFTFGSIIK 144
A FD+MP+R+VV+WTA+I+GC N Q + + ++M++S G P T S ++
Sbjct: 164 AVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLE 223
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
AC LG + +G LH +K+ G ++L +MYTK D DAR +F + KD+ S
Sbjct: 224 ACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVS 283
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI------------------------ 240
W S+I A+ + G+ +A+ F M G QP+E +
Sbjct: 284 WTSLIGAYCRAGHAEKAVELFLGMEESG-LQPDEVVISCLLAGLGNDAKVRGGKTFHAAI 342
Query: 241 ----FG----------SVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
FG S+++ C + A +F + D SW++++ + +
Sbjct: 343 VRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCL 402
Query: 285 SLFSEM--RDR---ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
L+ EM RD+ E + L C+ +GRL L G H Y IK N V NA
Sbjct: 403 ELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRL--GQSAHCYSIKHLAGENSSVANA 460
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
+++MY +C A +F + K D V+W+++I++ +++ L+ +ML +KP
Sbjct: 461 LISMYGRCGNFDVARKIFGMV-KTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKP 519
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
+ T V+ +CA +A+LE +H ++ GL D+ + L+D+Y+KCG LG ARK+F
Sbjct: 520 NSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMF 579
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ M DVV+W+ +I GY G +ALKLF+ M V PN +T + +L+AC H GLV+
Sbjct: 580 DSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVD 639
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+G L+ ME EY + P +H +C+VDLL ++G + EAED ++ M + D +W +LL +
Sbjct: 640 KGRELFTRME-EYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGA 698
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 125/498 (25%), Positives = 232/498 (46%), Gaps = 54/498 (10%)
Query: 25 SQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQ--PDVVLQNHILNMYGK 82
S + R T + AC L L +G +H + + P VV + + +MY K
Sbjct: 205 SAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVV--SSLFSMYTK 262
Query: 83 CGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI 142
C S EDAR+ F ++P++++VSWT++I + A++L++ M +SG+ P + +
Sbjct: 263 CDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCL 322
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
+ V G+ HA +++ G ++ NALI+MY K ++ A VF + ++D
Sbjct: 323 LAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDT 382
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG-------------------- 242
SW SM+ A+ K G +L+ L + EM +EF +
Sbjct: 383 DSWSSMVVAYCKAGLDLKCLELYREMQFR---DKDEFEYDTNSLISIISSCSRLGRLRLG 439
Query: 243 -----------------------SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASH 277
S++ C NF AR +F + + D+ +W+ALI+ +
Sbjct: 440 QSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHL 499
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
++ +A+ L+ +M + P+ T+ S++ +C L G +HS++ +G + ++ +C
Sbjct: 500 GHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSIC 559
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
A++ MY KC L A +F + + D V+WN +I+ H +A + +LFS M +
Sbjct: 560 TALVDMYMKCGQLGIARKMFDSMLER-DVVTWNVMISGYGMHGEAIQALKLFSMMERGNV 618
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
KP+ +TF ++ AC ++ +L + + L ++ ++D+ K G L A
Sbjct: 619 KPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAED 678
Query: 458 LFNFME-NPDVVSWSSLI 474
+ + M PD W +L+
Sbjct: 679 VVSAMPIEPDGGIWGTLL 696
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 240/531 (45%), Gaps = 52/531 (9%)
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P + W +++ + + + +M SG P +FT + A + LG++ +G
Sbjct: 68 PCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGA 127
Query: 157 QLHAHVIKS---EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
+HA+ ++ E + ++L+ MY + + DA +F + +DV +W ++I+
Sbjct: 128 AVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCV 187
Query: 214 KLGYELEALCHFNEMLH---HGAYQPNEFIFGSVFSAC---------------------- 248
G E L + M+ G +PN S AC
Sbjct: 188 CNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVG 247
Query: 249 ------------------SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ ARILF E+ DL SW +LI +A +A+ LF M
Sbjct: 248 HCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGM 307
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ L PD + + LL + G H+ I++ F +V + NA+++MYAKC +
Sbjct: 308 EESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQV 367
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHN---QAEELFRLFSRMLASQIKPDHITFNDV 407
A VF+ L + D+ SW+S++ A + + EL+R + + D + +
Sbjct: 368 DIAATVFRMLHQR-DTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISI 426
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
+ +C+++ L + HCY K + V N L+ +Y +CG+ ARK+F ++ DV
Sbjct: 427 ISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDV 486
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
V+WS+LI Y+ G +AL L+ +M + GV PN TLV V+++C+++ +E G L
Sbjct: 487 VTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHG-ELIHS 545
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ G+ C+ +VD+ + G + A + M + D+V W +++
Sbjct: 546 HVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSM-LERDVVTWNVMIS 595
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 140/283 (49%), Gaps = 13/283 (4%)
Query: 48 LRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAM 107
L L+LG+ H + + + + N +++MYG+CG+ + AR F + ++VV+W+A+
Sbjct: 433 LGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSAL 492
Query: 108 IAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
I+ S DA+ LY QML GV P T S+I +C+ L ++ G +H+HV
Sbjct: 493 ISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGL 552
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
L AL+ MY K ++ AR +F + +DV +W MI+ + G ++AL F+
Sbjct: 553 ECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFS- 611
Query: 228 MLHHGAYQPNEFIFGSVFSACS-----NFARILFNEID----SPDLASWNALIAGVASHS 278
M+ G +PN F ++ SAC + R LF ++ P+L + ++ +
Sbjct: 612 MMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSG 671
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
+ EA + S M + PDG +LL AC G++V
Sbjct: 672 HLQEAEDVVSAM---PIEPDGGIWGTLLGACKMHDNFEMGLRV 711
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
+AL+ YD ++ +T +IS+C++L +L+ G +H H+ + D+ +
Sbjct: 503 KDALLLYD-QMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTA 561
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
+++MY KCG L AR FD M +R+VV+W MI+G + + A+KL+ M + V P
Sbjct: 562 LVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPN 621
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
TF +I+ AC G V GR+L + + +L ++ + K + +A +V S
Sbjct: 622 SLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVS 681
Query: 196 GIA-RKDVTSWGSMIAA 211
+ D WG+++ A
Sbjct: 682 AMPIEPDGGIWGTLLGA 698
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 183/591 (30%), Positives = 306/591 (51%), Gaps = 50/591 (8%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ P +Y + ++S C+ + +G +VH + + + N +++MY K G++ D R
Sbjct: 98 LSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGR 157
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+M R+VVSW +++ G S N + +L+ M G P +T ++I A + G
Sbjct: 158 RVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQG 217
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+V +G Q+HA V+K + + N+LI+M +K + DAR VF + KD SW SMIA
Sbjct: 218 AVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIA 277
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-----FARILF--------- 256
G +LEA FN M GA +P F SV +C++ R+L
Sbjct: 278 GHVINGQDLEAFETFNNMQLAGA-KPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLS 336
Query: 257 ----------------NEIDSP-----------DLASWNALIAGVASHSNANEAMSLFSE 289
EID + SW A+I+G + + ++A++LFS
Sbjct: 337 TNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSL 396
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
MR + P+ T ++L ++H+ +IK ++ + V A+L + K
Sbjct: 397 MRREGVKPNHFTYSTILTVQHAVFI----SEIHAEVIKTNYEKSSSVGTALLDAFVKIGN 452
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ +A+ VF EL + D ++W++++A Q + EE ++F ++ IKP+ TF ++
Sbjct: 453 ISDAVKVF-ELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIIN 511
Query: 410 AC-AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
AC A AS+E Q H Y K L + V + L+ +Y K G++ SA ++F + D+V
Sbjct: 512 ACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLV 571
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
SW+S+I GYAQ G +AL++F M+ + + +T +GV++AC+H GLV +G + + IM
Sbjct: 572 SWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIM 631
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
N++ I PT EH SC++DL +RAG + +A D IN M VW+ +LA+
Sbjct: 632 INDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAA 682
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/563 (25%), Positives = 259/563 (46%), Gaps = 62/563 (11%)
Query: 66 CQPDVVLQNHILNMYGKCGSLED-----ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
C + +LQ+H++ + + L D A+ FD+ P R++ ++ S+ Q +A
Sbjct: 28 CHANPLLQSHVVALNART-LLRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEA 86
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ L++ + +SG+ P +T ++ C+G + +G Q+H +K HL N+L+ M
Sbjct: 87 LHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDM 146
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
YTK + D R VF + +DV SW S++ +S + + F M G Y+P+ +
Sbjct: 147 YTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEG-YRPDYYT 205
Query: 241 FGSVFSACSNF----------------------------------------ARILFNEID 260
+V +A +N AR++F+ ++
Sbjct: 206 VSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNME 265
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ D SWN++IAG + EA F+ M+ P T S++ +C L
Sbjct: 266 NKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRV 325
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H +K G +N V A++ KC + +A +F + VSW ++I+ LQ+
Sbjct: 326 LHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNG 385
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
++ LFS M +KP+H T++ ++ + ++++H + KT V
Sbjct: 386 DTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAV----FISEIHAEVIKTNYEKSSSVGT 441
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+D ++K G++ A K+F +E DV++WS+++ GYAQ G +EA K+F ++ G+ P
Sbjct: 442 ALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKP 501
Query: 501 NLVTLVGVLTACS-HVGLVEEGLHLYRIMENEYGIIPTREHCSCV----VDLLARAGCVH 555
N T ++ AC+ VE+G + Y I + CV V L A+ G +
Sbjct: 502 NEFTFCSIINACTAPTASVEQGKQFH-----AYAIKLRLNNALCVSSSLVTLYAKRGNIE 556
Query: 556 EAEDFINQMACDADIVVWKSLLA 578
A + + + D+V W S+++
Sbjct: 557 SAHEIFKRQK-ERDLVSWNSMIS 578
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 197/647 (30%), Positives = 316/647 (48%), Gaps = 77/647 (11%)
Query: 4 DYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDH- 60
D + S + N + EA+ Y T RP +A ++ A S L+ L+ G ++H
Sbjct: 62 DALRSRTRSNDFREAISTY---IEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAA 118
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ V + N ++NMYGKCG + D FD++ R+ VSW + IA + + A
Sbjct: 119 VKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQA 178
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLG---SVCLGRQLHAHVIKSEHGSHLIAQNAL 177
++ + M + FT S+ ACS LG + LG+QLH + ++ NAL
Sbjct: 179 LEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRV-GDQKTFTNNAL 237
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
+AMY K R+ D++ +F +D+ SW +MI++FS+ EAL F M+ G + +
Sbjct: 238 MAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGV-ELD 296
Query: 238 EFIFGSVFSACSNFARI-----------------------------------------LF 256
SV ACS+ R+ +F
Sbjct: 297 GVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVF 356
Query: 257 NEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGRLTL 315
+ I + WNA+I+G A + +A+ LF EM + LLP+ T+ S++ AC+
Sbjct: 357 DHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAF 416
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
+H Y +K+GF + V NA++ MY++ + + +F + + D VSWN++I
Sbjct: 417 SNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSM-EVRDRVSWNTMITG 475
Query: 376 CL---QHNQAEELFRLFSRM--------------LASQIKPDHITFNDVMGACAKMASLE 418
+ +++ A L RM KP+ IT V+ CA +A++
Sbjct: 476 YVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIA 535
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
++H Y + LA D+ V + L+D+Y KCG L +R++FN M N +V++W+ LI+
Sbjct: 536 KGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACG 595
Query: 479 QFGCGDEALKLFTRM-----RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
G G+EAL+LF M R PN VT + V ACSH GL+ EGL+L+ M++++G
Sbjct: 596 MHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHG 655
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV-VWKSLLAS 579
+ PT +H +CVVDLL RAG + EA + +N M + D V W SLL +
Sbjct: 656 VEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGA 702
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 148/546 (27%), Positives = 238/546 (43%), Gaps = 72/546 (13%)
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P R+ SW + +++ +AI YI+M SG P F F +++KA SGL + G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 157 QLHAHVIKSEHGSHLIA-QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
Q+HA +K +GS + N L+ MY K I D VF I +D SW S IAA +
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
+AL F M + + F SV ACSN
Sbjct: 173 EKWEQALEAFRAMQMEN-MELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKT 231
Query: 252 ------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
++ LF D+ SWN +I+ + +EA++ F M
Sbjct: 232 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCN 352
+ DG+T+ S+L AC L G ++H+Y+++ N V +A++ MY C + +
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVES 351
Query: 353 ALLVFKE-LGKNADSVSWNSIIAACLQHNQAEELFRLFSRML-ASQIKPDHITFNDVMGA 410
VF LG+ + WN++I+ ++ E+ LF M+ + + P+ T VM A
Sbjct: 352 GRRVFDHILGRRIE--LWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPA 409
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
C + +H Y K G D +V N LMD+Y + G + + +F+ ME D VSW
Sbjct: 410 CVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSW 469
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSL-----------------GVSPNLVTLVGVLTACS 513
+++I GY G AL L M+ + PN +TL+ VL C+
Sbjct: 470 NTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCA 529
Query: 514 HVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
+ + +G +H Y I I S +VD+ A+ GC++ + N+M + +++
Sbjct: 530 ALAAIAKGKEIHAYAIRNMLASDITV---GSALVDMYAKCGCLNLSRRVFNEMP-NKNVI 585
Query: 572 VWKSLL 577
W L+
Sbjct: 586 TWNVLI 591
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 140/544 (25%), Positives = 249/544 (45%), Gaps = 78/544 (14%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSL---RSLQLGRKVHD 59
N ++++LC+ + +AL A+ Q N+ + T + ACS+L L+LG+++H
Sbjct: 163 NSFIAALCRFEKWEQALEAFRAMQME-NMELSSFTLVSVALACSNLGVMHGLRLGKQLHG 221
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
+ L Q N ++ MY K G ++D++ F+ R++VSW MI+ SQ+ + ++
Sbjct: 222 YSLRVGDQ-KTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSE 280
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ----N 175
A+ + M+ GV T S++ ACS L + +G+++HA+V+++ + LI +
Sbjct: 281 ALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRN---NDLIENSFVGS 337
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
AL+ MY ++ R VF I + + W +MI+ +++ G + +AL F EM+
Sbjct: 338 ALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLL 397
Query: 236 PNEFIFGSVFSACS----------------------------------------NFARIL 255
PN SV AC + + +
Sbjct: 398 PNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETI 457
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE-----------------LLPD 298
F+ ++ D SWN +I G + A+ L EM+ E P+
Sbjct: 458 FDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPN 517
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+T+ ++L C + +G ++H+Y I+ S++ V +A++ MYAKC L + VF
Sbjct: 518 AITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFN 577
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS-----QIKPDHITFNDVMGACAK 413
E+ N + ++WN +I AC H + EE LF M+A + KP+ +TF V AC+
Sbjct: 578 EM-PNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSH 636
Query: 414 MASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM--ENPDVVSW 470
+ E + + G+ ++D+ + G L A +L N M E V +W
Sbjct: 637 SGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAW 696
Query: 471 SSLI 474
SSL+
Sbjct: 697 SSLL 700
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 188/449 (41%), Gaps = 72/449 (16%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +SS + + ++EAL + + + T A ++ ACS L L +G+++H ++L
Sbjct: 266 NTMISSFSQSDRFSEALAFFRLMVLE-GVELDGVTIASVLPACSHLERLDVGKEIHAYVL 324
Query: 63 LSK-CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ + + + +++MY C +E R FD + R + W AMI+G ++N + A+
Sbjct: 325 RNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKAL 384
Query: 122 KLYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
L+I+M++ +G++P T S++ AC + +H + +K QNAL+ M
Sbjct: 385 ILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDM 444
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH--------- 231
Y++ ++ + +F + +D SW +MI + G AL +EM
Sbjct: 445 YSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKD 504
Query: 232 -------GAYQPNEFIFGSVFSACS----------------------------------- 249
G Y+PN +V C+
Sbjct: 505 DNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYA 564
Query: 250 -----NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-----RDRELLPDG 299
N +R +FNE+ + ++ +WN LI H EA+ LF M R E P+
Sbjct: 565 KCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNE 624
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV-PVCN---AILTMYAKCSVLCNALL 355
+T ++ AC + +G+ + +M D V P + ++ + + L A
Sbjct: 625 VTFITVFAACSHSGLISEGLNL---FYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYE 681
Query: 356 VFKELGKNADSV-SWNSIIAACLQHNQAE 383
+ + D V +W+S++ AC H E
Sbjct: 682 LVNTMPAEFDKVGAWSSLLGACRIHQNVE 710
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 108/228 (47%), Gaps = 11/228 (4%)
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
K + + SW + + + N E + M S +PD+ F V+ A + + L
Sbjct: 49 KPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDL 108
Query: 418 EMVTQLHCYITKTGL-AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
+ Q+H K G + V V N L+++Y KCG +G K+F+ + + D VSW+S I
Sbjct: 109 KTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAA 168
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE-----EGLHLYRIMENE 531
+F ++AL+ F M+ + + TLV V ACS++G++ + LH Y + +
Sbjct: 169 LCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGD 228
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++ + A+ G V +++ D D+V W ++++S
Sbjct: 229 QKTFTN----NALMAMYAKLGRVDDSKALFESFV-DRDMVSWNTMISS 271
>gi|222625199|gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japonica Group]
Length = 691
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 180/568 (31%), Positives = 289/568 (50%), Gaps = 44/568 (7%)
Query: 54 GRKVHDHILLSKC--QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGC 111
GR VH H++ + D+ N +LNMYGK G L AR FD+MP+RN+VS+ ++
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137
Query: 112 SQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL 171
+Q A L+ ++ G QF +++K + + L +H+ K H +
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH 231
+ LI Y+ + DA +VF+GI RKD W +M++ +S+ A F++M
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVS 257
Query: 232 GAYQPNEFIFGSVFSA--------------------------------------CSNF-- 251
G +PN F SV A C +
Sbjct: 258 GC-KPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKD 316
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR+ F I D+ + +I+ A + +A LF + +LP+ ++ S+L AC
Sbjct: 317 ARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTN 376
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+ L G Q+H++ IK+G +S++ V NA++ YAKC+ + ++L +F L ++A+ VSWN+
Sbjct: 377 MVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL-RDANEVSWNT 435
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
I+ Q EE +F M A+Q+ +T++ V+ ACA AS+ Q+HC I K+
Sbjct: 436 IVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKST 495
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
D + N L+D Y KCG + A K+F + D++SW+++I GYA G +AL+LF
Sbjct: 496 FNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFD 555
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
RM V N +T V +L+ CS GLV GL L+ M ++GI P+ EH +C+V LL RA
Sbjct: 556 RMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRA 615
Query: 552 GCVHEAEDFINQMACDADIVVWKSLLAS 579
G +++A FI + +VW++LL+S
Sbjct: 616 GRLNDALQFIGDIPSAPSAMVWRALLSS 643
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 197/418 (47%), Gaps = 53/418 (12%)
Query: 34 RPSTYA--GLISACSSLRSLQLGRKVHDHIL--LSKCQPDVVLQNHILNMYGKCGSLEDA 89
+P+ +A ++ A L S+ LG+ +H + L+ +P V +L+MY KCG ++DA
Sbjct: 260 KPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHV--GGALLDMYAKCGDIKDA 317
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R+ F+ +P +V+ + MI+ +Q+ Q A +L++++++S V+P +++ S+++AC+ +
Sbjct: 318 RLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNM 377
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
+ G+Q+H H IK H S L NAL+ Y K + + + +FS + + SW +++
Sbjct: 378 VQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIV 437
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQP-NEFIFGSVFSACSNFARI-------------- 254
FS+ G EAL F EM A P + + SV AC++ A I
Sbjct: 438 VGFSQSGLGEEALSVFCEM--QAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKST 495
Query: 255 --------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
+F + D+ SWNA+I+G A H A +A+ LF
Sbjct: 496 FNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFD 555
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYAKC 347
M + + +T +LL C + G+ + S I G ++ I+ + +
Sbjct: 556 RMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRA 615
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP-DHITF 404
L +AL ++ ++ W +++++C+ H FS +I+P D T+
Sbjct: 616 GRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVA--LGRFSAEKILEIEPQDETTY 671
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 144/291 (49%), Gaps = 18/291 (6%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ P+ Y+ ++ AC+++ L G+++H+H + + D+ + N +++ Y KC ++ +
Sbjct: 360 VLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSL 419
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP-GQFTFGSIIKACSGL 149
F + N VSW ++ G SQ+ +A+ ++ +M Q+ MP Q T+ S+++AC+
Sbjct: 420 KIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEM-QAAQMPCTQVTYSSVLRACAST 478
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
S+ Q+H + KS + + N+LI Y K I DA VF + +D+ SW ++I
Sbjct: 479 ASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAII 538
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFN--EID-- 260
+ ++ G +AL F+ M + + N+ F ++ S CS N LF+ ID
Sbjct: 539 SGYALHGQAADALELFDRM-NKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHG 597
Query: 261 -SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
P + + ++ + N+A+ ++ P + +LL +CI
Sbjct: 598 IKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPS---APSAMVWRALLSSCI 645
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 10/247 (4%)
Query: 286 LFSEMRDRELLPDGLTVHSLLCA-----CIGRLTLYQGMQVHSYIIKMGFDSNVPV--CN 338
L E+ +LP V S CA CI R G VH ++++ G + + N
Sbjct: 41 LEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCAN 100
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
+L MY K L +A +F + + + VS+ +++ A Q E LF R+ +
Sbjct: 101 VLLNMYGKLGPLASARRLFDRMPER-NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE 159
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
+ ++ M + + +H K G + FV +GL+D Y C + A +
Sbjct: 160 VNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHV 219
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA--CSHVG 516
FN + D V W++++ Y++ C + A ++F++MR G PN L VL A C
Sbjct: 220 FNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSV 279
Query: 517 LVEEGLH 523
++ +G+H
Sbjct: 280 VLGKGIH 286
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 178/584 (30%), Positives = 285/584 (48%), Gaps = 44/584 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ AC L+S+++G+ VH+ + L + DV + + ++ +Y + G L DA+ FD +
Sbjct: 60 TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
PQ++ V W M+ G +N +AIK++++M S + P TF ++ C+ + LG
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
QLH + N L+AMY+K + AR +F + + D+ SW +I+ + + G
Sbjct: 180 QLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNG 239
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-------------------------- 250
EA F M+ G +P+ F S F C N
Sbjct: 240 LMGEAEHLFRGMISAGI-KPDSITFAS-FLPCVNELLSLKHCKEIHGYIIRHAVVLDVFL 297
Query: 251 ---FARILFNEID------------SPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
I F D S D +I+G + EA+ F + +
Sbjct: 298 KSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERM 357
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P +T S+ A G L G ++H IIK D V +AIL MYAKC L A
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF + + D++ WNS+I +C Q+ + E LF +M + D ++ + + ACA +
Sbjct: 418 VFNRITEK-DAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLP 476
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+L ++H + K L D++ + L+D+Y KCG+L +R++F+ M+ + VSW+S+I
Sbjct: 477 ALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIIS 536
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
Y G E L LF M G+ P+ VT +G+++AC H G V+EG+ Y +M EYGI
Sbjct: 537 AYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIP 596
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH +CV D+ RAG +HEA + IN M D VW +LL +
Sbjct: 597 ARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGA 640
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 149/546 (27%), Positives = 261/546 (47%), Gaps = 54/546 (9%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MY + GSL+DA+ F + +W MI G + Q N A+ Y++ML +GV P ++T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
F ++KAC GL SV +G+ +H V + ++LI +Y + + DA+ +F I
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-------- 250
+KD W M+ + K G A+ F EM H +PN F V S C++
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEM-RHSEIKPNSVTFACVLSVCASEAMLDLGT 179
Query: 251 --------------------------------FARILFNEIDSPDLASWNALIAGVASHS 278
AR LF+ + DL SWN +I+G +
Sbjct: 180 QLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNG 239
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
EA LF M + PD +T S L L+L ++H YII+ +V + +
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299
Query: 339 AILTMYAKCSVLCNALLVFKELGKNA--DSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
A++ +Y KC + + K L +++ D+V ++I+ + + + +E F ++ +
Sbjct: 300 ALIDIYFKCR---DVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQER 356
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
+KP +TF+ + A A +A+L + +LH I KT L V + ++D+Y KCG L A
Sbjct: 357 MKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLAC 416
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
++FN + D + W+S+I +Q G EA+ LF +M G + V++ G L+AC+++
Sbjct: 417 RVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLP 476
Query: 517 LVEEGLHLYRIMENEYGIIPTREHC---SCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
+ G ++ +M P R S ++D+ A+ G ++ + ++M + + V W
Sbjct: 477 ALHYGKEIHGLMIKG----PLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQ-EKNEVSW 531
Query: 574 KSLLAS 579
S++++
Sbjct: 532 NSIISA 537
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 221/489 (45%), Gaps = 44/489 (8%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
++ I+ T+A ++S C+S L LG ++H + + D + N +L MY KC L+
Sbjct: 152 HSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQ 211
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
AR FD +PQ ++VSW +I+G QN +A L+ M+ +G+ P TF S + +
Sbjct: 212 AARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVN 271
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
L S+ +++H ++I+ + ++ALI +Y K + A+ + D +
Sbjct: 272 ELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTT 331
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------- 254
MI+ + G EAL F ++ +P F S+F A + A +
Sbjct: 332 MISGYVLNGKNKEALEAFRWLVQE-RMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKT 390
Query: 255 ---------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
+FN I D WN++I + + EA++LF
Sbjct: 391 KLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLF 450
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
+M D +++ L AC L+ G ++H +IK S++ ++++ MYAKC
Sbjct: 451 RQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKC 510
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
L + VF + + + VSWNSII+A H +E LF ML + I+PDH+TF +
Sbjct: 511 GNLNFSRRVFDRM-QEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGI 569
Query: 408 MGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NP 465
+ AC + E + H + G+ + + D++ + G L A + N M P
Sbjct: 570 ISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPP 629
Query: 466 DVVSWSSLI 474
D W +L+
Sbjct: 630 DAGVWGTLL 638
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 178/393 (45%), Gaps = 42/393 (10%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+P T+A + + L SL+ +++H +I+ DV L++ ++++Y KC +E A+
Sbjct: 256 IKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQ 315
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ + V T MI+G N + +A++ + ++Q + P TF SI A +GL
Sbjct: 316 KNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLA 375
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ LG++LH +IK++ +A++ MY K R+ A VF+ I KD W SMI
Sbjct: 376 ALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMIT 435
Query: 211 AFSKLGYELEALCHFNEM------------------------LHHGAYQPNEFIFGSV-- 244
+ S+ G EA+ F +M LH+G I G +
Sbjct: 436 SCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRS 495
Query: 245 -----------FSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
++ C NF+R +F+ + + SWN++I+ +H + E ++LF EM
Sbjct: 496 DLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEML 555
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ PD +T ++ AC + +G++ H + G + + + M+ + L
Sbjct: 556 RNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRL 615
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
A + D+ W +++ AC H E
Sbjct: 616 HEAFETINSMPFPPDAGVWGTLLGACHIHGNVE 648
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 143/289 (49%), Gaps = 14/289 (4%)
Query: 32 RIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
R++P+ T++ + A + L +L LG+++H I+ +K + + IL+MY KCG L+ A
Sbjct: 356 RMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLA 415
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F+++ +++ + W +MI CSQN + +AI L+ QM G + + AC+ L
Sbjct: 416 CRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANL 475
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
++ G+++H +IK S L A+++LI MY K + +R VF + K+ SW S+I
Sbjct: 476 PALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSII 535
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNEID 260
+A+ G E L F+EML +G QP+ F + SAC + + ++ E
Sbjct: 536 SAYGNHGDLKECLALFHEMLRNGI-QPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYG 594
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
P A +A + A F + PD +LL AC
Sbjct: 595 IPARMEHYACVADM--FGRAGRLHEAFETINSMPFPPDAGVWGTLLGAC 641
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 189/594 (31%), Positives = 297/594 (50%), Gaps = 58/594 (9%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCG---SLEDARMGFD 94
Y L+ +C++L + VH HI + + L+N +L Y + G L AR+ D
Sbjct: 5 YLDLLRSCTALPHVA---AVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARL-ID 60
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGLGSVC 153
+MP+RN VS+ +I+ S+ A++ + + + G+ +FT+ + + ACS +
Sbjct: 61 EMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLR 120
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
G+ +HA + G+ + N+L +MY + +AR VF D SW S+++ +
Sbjct: 121 TGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYV 180
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------- 254
+ G E L F+ M HHG N F GS+ C++ + +
Sbjct: 181 RAGAREETLKVFSLMCHHG-LGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDA 239
Query: 255 -----------------------LFNEIDSPDLASWNALIAGVASHSNA------NEAMS 285
LF + P++ +NA+IAG A EA+S
Sbjct: 240 DLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALS 299
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
L+SEM+ R + P T S+L AC G Q+H ++K F + + +A++ +Y+
Sbjct: 300 LYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYS 359
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
+ + F+ L K D V+W S+I+ C+Q+ E+ RLF + +KPD T +
Sbjct: 360 DSGCMEDGYRCFRSLPKQ-DIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMS 418
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
VM ACA +A Q+ C K G + N + + + G + + + F ME+
Sbjct: 419 SVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESR 478
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
DVVSWS++I +AQ GC +AL++F M + V+PN VT + VLTACSH GLV++GL Y
Sbjct: 479 DVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYY 538
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
IM+NEYG+ PT +H +CVVDLL RAG + +AE FI A D VVW+SLLAS
Sbjct: 539 EIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLAS 592
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/522 (25%), Positives = 241/522 (46%), Gaps = 52/522 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +SS + L AL + ++ +R+ TYA ++ACS L+ G+ VH +
Sbjct: 71 NLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTV 130
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
L V L N + +MY CG + +AR FD + + VSW ++++G + + +K
Sbjct: 131 LDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLK 190
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVC--LGRQLHAHVIKSEHGSHLIAQNALIAM 180
++ M G+ F GSIIK C+ V + +H V+K+ + L +A+I M
Sbjct: 191 VFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDM 250
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK----LGYEL--EALCHFNEMLHHGAY 234
Y K + +A +F + +V + +MIA F + +G E+ EAL ++EM G
Sbjct: 251 YAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRG-M 309
Query: 235 QPNEFIFGSVFSACS-----NFARIL---------------------------------- 255
QP+EF F S+ AC+ F + +
Sbjct: 310 QPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYR 369
Query: 256 -FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
F + D+ +W ++I+G + +A+ LF E L PD T+ S++ AC
Sbjct: 370 CFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAV 429
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
G Q+ IK GF+ + N+ + M A+ + F+E+ ++ D VSW+++I+
Sbjct: 430 ARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEM-ESRDVVSWSAVIS 488
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI-TKTGLA 433
+ QH A + R+F+ M+ +++ P+ +TF +V+ AC+ ++ + + + + GL+
Sbjct: 489 SHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLS 548
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLF-NFMENPDVVSWSSLI 474
+ + ++D+ + G L A + + D V W SL+
Sbjct: 549 PTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLL 590
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 121/519 (23%), Positives = 228/519 (43%), Gaps = 48/519 (9%)
Query: 3 NDYVSSLCK------QNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLG 54
N ++ C+ + + EAL Y Q+ ++PS T++ ++ AC+ G
Sbjct: 276 NAMIAGFCRDEAAVGKEVSREALSLYSEMQSRG---MQPSEFTFSSILRACNLAGEFGFG 332
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
+++H +L D + + ++++Y G +ED F +P++++V+WT+MI+GC QN
Sbjct: 333 KQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQN 392
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
A++L+ + + G+ P FT S++ AC+ L G Q+ IK
Sbjct: 393 ELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMG 452
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
N+ I M + + F + +DV SW ++I++ ++ G +AL FNEM+ +
Sbjct: 453 NSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMM-NAKV 511
Query: 235 QPNEFIFGSVFSACSN---------FARILFNEID-SPDLASWNALIAGVASHSNANEAM 284
PNE F +V +ACS+ + I+ NE SP + ++ + +A
Sbjct: 512 APNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAE 571
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
+ +RD D + SLL +C + +G V I+ + S+ + MY
Sbjct: 572 AF---IRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYV-ILYNMY 627
Query: 345 ---AKCSVLCNALLVFKELG-KNADSVSW-------NSIIAACLQHNQAEELFRLFSRML 393
+ S+ + KE G K +SW +S +A H ++ +++ + ML
Sbjct: 628 LDAGELSLASKTRDLMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEML 687
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK----- 448
S+I+ T N G+ +S + + + C+ K +AF + + I +
Sbjct: 688 -SKIEKLANTDNASTGSDGISSSEQNL--VGCHSEKIAVAFGMIHLPQSAPIRVMKNLRV 744
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFG---CGD 484
C S KL + EN +++ + + + G CGD
Sbjct: 745 CRDCHSTMKLISGSENREIILRDGIRFHHFRGGSCSCGD 783
>gi|224066771|ref|XP_002302207.1| predicted protein [Populus trichocarpa]
gi|222843933|gb|EEE81480.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 179/603 (29%), Positives = 285/603 (47%), Gaps = 73/603 (12%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S YA L CSS ++ RKV +L + P L N ++ YGKC LEDA+ FD+
Sbjct: 58 SLYAHLFQVCSSSLAIVEARKVESQLLGACPTPPTFLLNRAIDTYGKCRCLEDAKELFDE 117
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MPQR+ SW AMI C Q + A+ + M + GV + TF S ++AC + +CL
Sbjct: 118 MPQRDGGSWNAMIRACLQCVRPEKALSYFGDMHKQGVYANEVTFSSALRACGDVLELCLS 177
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
RQ+H ++K ++I ++L+ +Y K + ++R +F I + +W ++ + ++
Sbjct: 178 RQIHGLIVKYGFCGNVIVGSSLVDVYGKCGAMSESRRIFDEIENPNNVTWNIIVRRYLEV 237
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G E EA+ F +M +P + F + ACS+
Sbjct: 238 GDENEAVVMFFKMFR-AKLRPLSYTFSNALVACSDMRAVKEGMQIHGVATKINFEEEEVV 296
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR +F+ S DL SW ++++ A EA LF EM +R +
Sbjct: 297 LSSLIDMYVKCGEIESARRVFDLPGSRDLISWTSMVSAYAMSGRMREARELFDEMPERNM 356
Query: 296 LP-------------------------------DGLTVHSLLCACIGRLTLYQGMQVHSY 324
+ D +T +L C G + G QVH +
Sbjct: 357 VSYNALLAGYIRSLQWEEALDFVYLMCRTTENIDHITFQLMLNVCSGLSDVDMGKQVHGF 416
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
I + G+ SN + NA+L MY KC L +A + F ++ ++ DSVSWN ++ + + +E+
Sbjct: 417 IYRHGWLSNTVIGNALLDMYCKCGNLRSAGVWFHQMKQSRDSVSWNVLLTSYARRQMSEQ 476
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
+F R + + KP F ++ ACA +L+ Q+H ++ + G D + L+D
Sbjct: 477 AMSIF-REMQWETKPHKFIFATLLAACANTFALDQGKQIHGFMIRNGYDIDTVIAGALLD 535
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y KC L A +F + D+V W+S+ILG G G AL+LF M G P+ VT
Sbjct: 536 MYSKCRCLEYALIVFREADKRDLVLWNSMILGCCHLGRGKLALRLFGFMEEEGTKPDNVT 595
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
G+L AC + G V+ + M ++Y IIP EH C+++LL+R GC+ E E+FI M
Sbjct: 596 FQGILLACVYEGHVDLARQYFNSMSSKYCIIPRLEHYECIIELLSRYGCMKELENFIKDM 655
Query: 565 ACD 567
D
Sbjct: 656 PFD 658
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 176/363 (48%), Gaps = 33/363 (9%)
Query: 248 CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC 307
C A+ LF+E+ D SWNA+I +A+S F +M + + + +T S L
Sbjct: 107 CLEDAKELFDEMPQRDGGSWNAMIRACLQCVRPEKALSYFGDMHKQGVYANEVTFSSALR 166
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
AC L L Q+H I+K GF NV V ++++ +Y KC + + +F E+ +N ++V
Sbjct: 167 ACGDVLELCLSRQIHGLIVKYGFCGNVIVGSSLVDVYGKCGAMSESRRIFDEI-ENPNNV 225
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
+WN I+ L+ E +F +M ++++P TF++ + AC+ M +++ Q+H
Sbjct: 226 TWNIIVRRYLEVGDENEAVVMFFKMFRAKLRPLSYTFSNALVACSDMRAVKEGMQIHGVA 285
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
TK + V++ L+D+Y+KCG + SAR++F+ + D++SW+S++ YA G EA
Sbjct: 286 TKINFEEEEVVLSSLIDMYVKCGEIESARRVFDLPGSRDLISWTSMVSAYAMSGRMREAR 345
Query: 488 KLFTRM----------------RSLGVSPNL---------------VTLVGVLTACSHVG 516
+LF M RSL L +T +L CS +
Sbjct: 346 ELFDEMPERNMVSYNALLAGYIRSLQWEEALDFVYLMCRTTENIDHITFQLMLNVCSGLS 405
Query: 517 LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
V+ G ++ + +G + + ++D+ + G + A + +QM D V W L
Sbjct: 406 DVDMGKQVHGFI-YRHGWLSNTVIGNALLDMYCKCGNLRSAGVWFHQMKQSRDSVSWNVL 464
Query: 577 LAS 579
L S
Sbjct: 465 LTS 467
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 157/323 (48%), Gaps = 19/323 (5%)
Query: 265 ASWNALIAGVASHSNAN---EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
A+ AL + SH AN +A+S+ D L H L C L + + +V
Sbjct: 23 ANVKALTKQILSHLEANRLKQAVSILFASPD--CFAYSLYAH-LFQVCSSSLAIVEARKV 79
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
S ++ + N + Y KC L +A +F E+ + D SWN++I ACLQ +
Sbjct: 80 ESQLLGACPTPPTFLLNRAIDTYGKCRCLEDAKELFDEMPQR-DGGSWNAMIRACLQCVR 138
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
E+ F M + + +TF+ + AC + L + Q+H I K G +V V +
Sbjct: 139 PEKALSYFGDMHKQGVYANEVTFSSALRACGDVLELCLSRQIHGLIVKYGFCGNVIVGSS 198
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+D+Y KCG++ +R++F+ +ENP+ V+W+ ++ Y + G +EA+ +F +M + P
Sbjct: 199 LVDVYGKCGAMSESRRIFDEIENPNNVTWNIIVRRYLEVGDENEAVVMFFKMFRAKLRPL 258
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRI-----MENEYGIIPTREHCSCVVDLLARAGCVHE 556
T L ACS + V+EG+ ++ + E E ++ S ++D+ + G +
Sbjct: 259 SYTFSNALVACSDMRAVKEGMQIHGVATKINFEEEEVVL------SSLIDMYVKCGEIES 312
Query: 557 AEDFINQMACDADIVVWKSLLAS 579
A + + D++ W S++++
Sbjct: 313 ARRVFD-LPGSRDLISWTSMVSA 334
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 159/489 (32%), Positives = 265/489 (54%), Gaps = 34/489 (6%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F+ + + N + W MI G + + ++ LY+ M+ G++P +TF ++K+C+ +
Sbjct: 21 FETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKTF 80
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+Q+H V+K L +LI+MY + R+ DA VF + +DV S+ ++I +
Sbjct: 81 TEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGY 140
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
+ G ++ + A+ LF+EI D+ SWNA+I+
Sbjct: 141 ASRG-DIRS------------------------------AQKLFDEIPVKDVVSWNAMIS 169
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A EA+ LF EM + PD T ++L AC ++ G QVHS++ GFDS
Sbjct: 170 GYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDS 229
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N+ + NA++ +Y+KC + A +F+ L D +SWN++I N +E LF M
Sbjct: 230 NLKIVNALIDLYSKCGEVETACGLFQGLSYK-DVISWNTLIGGYTHMNLYKEALLLFQEM 288
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFDVFVMNGLMDIYIKCG 450
L S P+ +T V+ ACA + ++++ +H YI K G+ + L+D+Y KCG
Sbjct: 289 LRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG 348
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ +A ++FN M + + SW+++I G+A G D + LF+RMR +G+ P+ +T VG+L+
Sbjct: 349 DIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLS 408
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSH G+++ G H++R M +Y + P EH C++DLL +G EAE+ IN M + D
Sbjct: 409 ACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDG 468
Query: 571 VVWKSLLAS 579
V+W SLL +
Sbjct: 469 VIWCSLLKA 477
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 170/346 (49%), Gaps = 33/346 (9%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+A +F I P+ WN +I G A S+ +++L+ M LLP+ T LL +C
Sbjct: 16 YATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCA 75
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN------- 363
T +G Q+H ++K+GFD ++ V ++++MY + L +A VF
Sbjct: 76 KSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTA 135
Query: 364 -----------------------ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
D VSWN++I+ + +E LF M+ ++PD
Sbjct: 136 LITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPD 195
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T+ V+ ACA S+E+ Q+H ++ G ++ ++N L+D+Y KCG + +A LF
Sbjct: 196 ESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQ 255
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
+ DV+SW++LI GY EAL LF M G +PN VT++ VL AC+H+G ++
Sbjct: 256 GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDI 315
Query: 521 G--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
G +H+Y I + G+ + ++D+ A+ G + A N M
Sbjct: 316 GRWIHVY-IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 360
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 192/439 (43%), Gaps = 77/439 (17%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA------- 89
T+ L+ +C+ ++ G+++H +L D+ + +++MY + LEDA
Sbjct: 66 TFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRS 125
Query: 90 ------------------------RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ FD++P ++VVSW AMI+G ++ +A++L+
Sbjct: 126 SHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFE 185
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M++ V P + T+ +++ AC+ GS+ LGRQ+H+ V S+L NALI +Y+K
Sbjct: 186 EMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCG 245
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A +F G++ KDV SW ++I ++ + EAL F EML G PN+ SV
Sbjct: 246 EVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSVL 304
Query: 246 SACSNFARI------------------------------------------LFNEIDSPD 263
AC++ I +FN +
Sbjct: 305 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKS 364
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV-H 322
L+SWNA+I G A H A+ + LFS MR + PD +T LL AC L G +
Sbjct: 365 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFR 424
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
S + ++ + + A + + D V W S++ AC H
Sbjct: 425 SMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNV 484
Query: 383 EELFRLFSRMLASQIKPDH 401
EL F++ L +I+P++
Sbjct: 485 -ELAESFAQNLI-KIEPEN 501
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 159/319 (49%), Gaps = 17/319 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + Y EAL ++ N+R STY ++SAC+ S++LGR+VH +
Sbjct: 165 NAMISGYAETGCYKEALELFE-EMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVD 223
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ + N ++++Y KCG +E A F + ++V+SW +I G + +A+
Sbjct: 224 DHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALL 283
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA--QNALIAM 180
L+ +ML+SG P T S++ AC+ LG++ +GR +H ++ K G + + +LI M
Sbjct: 284 LFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 343
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K I A VF+ + K ++SW +MI F+ G + F+ M G +P++
Sbjct: 344 YAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGI-EPDDIT 402
Query: 241 FGSVFSACS-----NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEM 290
F + SACS + R +F + +P L + +I + EA + + M
Sbjct: 403 FVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTM 462
Query: 291 RDRELLPDGLTVHSLLCAC 309
E+ PDG+ SLL AC
Sbjct: 463 ---EMEPDGVIWCSLLKAC 478
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 178/557 (31%), Positives = 281/557 (50%), Gaps = 60/557 (10%)
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
L+ HI G L AR FD++P + ++ A+I S + AI LY ML
Sbjct: 40 LEQHIAR-----GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFR 94
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
V P ++TF ++KACS L +C GR +HAH + L ALI +Y + R A
Sbjct: 95 VPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAA 154
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF---------- 241
NVF+ + +DV +W +M+A ++ G A+ H +M G +PN
Sbjct: 155 NVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQH 214
Query: 242 GSVFSACSNFARIL---------------------------------FNEIDSPDLASWN 268
G++F S A L F+ + + +W+
Sbjct: 215 GALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWS 274
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGL------TVHSLLCACIGRLTLYQGMQVH 322
ALI G EA +LF +M L +G+ +V S L C L G Q+H
Sbjct: 275 ALIGGFVLCDRMTEAFNLFKDM-----LVEGMCFLSATSVASALRVCASLADLRMGTQLH 329
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ + K G +++ N++L+MYAK ++ A ++F E+ D++S+ ++++ +Q+ +A
Sbjct: 330 ALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIK-DTISYGALLSGYVQNGKA 388
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
EE F +F +M A ++PD T ++ AC+ +A+L+ H + GLA + + N L
Sbjct: 389 EEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSL 448
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y KCG + +R++F+ M D+VSW+++I GY G G EA LF M++ G P+
Sbjct: 449 IDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDD 508
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
VT + ++ ACSH GLV EG H + M ++YGI+P EH C+VDLLAR G + EA FI
Sbjct: 509 VTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQ 568
Query: 563 QMACDADIVVWKSLLAS 579
M AD+ VW +LL +
Sbjct: 569 SMPLKADVRVWGALLGA 585
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 137/545 (25%), Positives = 237/545 (43%), Gaps = 59/545 (10%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
A D ++ R+ P+ T+ ++ ACS+L L GR +H H D+ + +++
Sbjct: 83 AIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALID 142
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSGVMPGQF 137
+Y +C A F KMP R+VV+W AM+AG + + + AI + M + G+ P
Sbjct: 143 LYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNAS 202
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKS---EHGSHLIAQNALIAMYTKFDRILDARNVF 194
T S++ + G++ G +HA+ +++ ++ ++ AL+ MY K ++ A VF
Sbjct: 203 TLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVF 262
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS----- 249
G+ ++ +W ++I F EA F +ML G + S C+
Sbjct: 263 HGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADL 322
Query: 250 -----------------------------------NFARILFNEIDSPDLASWNALIAGV 274
N A +LF+EI D S+ AL++G
Sbjct: 323 RMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGY 382
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+ A EA +F +M+ + PD T+ SL+ AC L G H +I G
Sbjct: 383 VQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALET 442
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
+CN+++ MYAKC + + VF ++ D VSWN++IA H +E LF M
Sbjct: 443 SICNSLIDMYAKCGRIDLSRQVFDKMPAR-DIVSWNTMIAGYGIHGLGKEATTLFLSMKN 501
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQ-LHCYIT---KTGLAFDVFVMNGLMDIYIKCG 450
+PD +TF ++ AC+ +VT+ H + T K G+ + ++D+ + G
Sbjct: 502 QGFEPDDVTFICLIAACSHSG---LVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGG 558
Query: 451 SLGSARKLFNFME-NPDVVSWSSLILG---YAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
L A + M DV W +L+ + G + ++ ++ G N V L
Sbjct: 559 FLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTG-NFVLLS 617
Query: 507 GVLTA 511
+ +A
Sbjct: 618 NIFSA 622
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 184/585 (31%), Positives = 299/585 (51%), Gaps = 43/585 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T+A + S+C L LG +V HI+ + V + N +++M+ S+E+A FD
Sbjct: 948 NTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDH 1007
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M + +++SW AMI+ + + ++++ + M T S++ CS + ++ G
Sbjct: 1008 MNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWG 1067
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R +H V+K S++ N L+ +Y++ R DA VF + +D+ SW SM+A + +
Sbjct: 1068 RGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQD 1127
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G L+ L E+L G N F S +ACSN
Sbjct: 1128 GKCLDGLKILAELLQMGKVM-NHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIV 1186
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A+ + + PD +WNALI G A + NEA+ + +R++ +
Sbjct: 1187 GNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGI 1246
Query: 296 LPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ +T+ S+L AC L + GM +H++I+ GF+S+ V N+++TMYAKC L ++
Sbjct: 1247 PANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSN 1306
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F LG N ++WN+++AA H EE ++F M + D +F+ + A A +
Sbjct: 1307 YIFDGLG-NKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANL 1365
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
A LE QLH + K G D+ V N MD+Y KCG + K+ N +SW+ LI
Sbjct: 1366 AVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILI 1425
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
+A+ GC +A + F M LG P+ VT V +L+AC+H GLV+EGL Y M E+G+
Sbjct: 1426 SAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGV 1485
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P EHC C++DLL R+G + AE FI +M + + W+SLLA+
Sbjct: 1486 FPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAA 1530
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 147/479 (30%), Positives = 231/479 (48%), Gaps = 43/479 (8%)
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
I++ C + G +H H+I + GS L LI Y K ++ ARNVF G+ +
Sbjct: 36 ILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERS 95
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------- 251
V SW +M++ +S+ G +A F++M H G + N+F +GS AC++
Sbjct: 96 VVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGV-KANQFTYGSALRACTSLRCLDMGIQVQ 154
Query: 252 ------------------------------ARILFNEIDSPDLASWNALIAGVASHSNAN 281
A LF + D+ SWNA+I G A A+
Sbjct: 155 GCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFAD 214
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
++ +F M L+PD T+ S+L A L Q+H I ++G+ S V ++
Sbjct: 215 DSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLI 274
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN-QAEELFRLFSRMLASQIKPD 400
YAK L +A + K + K D S ++I + + LF M I D
Sbjct: 275 NAYAKNGSLRSAKDLRKGMLKK-DLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMD 333
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
+ ++ CA +AS + TQ+H + K ++DV + N L+D+Y K G + A++ F+
Sbjct: 334 DVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFD 393
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
ME +V+SW+SLI GYA+ G G A+ L+ +M S G PN VT + +L ACSH GL E
Sbjct: 394 EMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAE 453
Query: 521 GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G + M N+Y I P EH SC+VDL AR G + EA + + ++ + +W ++L +
Sbjct: 454 GCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGA 512
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 165/623 (26%), Positives = 293/623 (47%), Gaps = 77/623 (12%)
Query: 33 IRPSTY--AGLISACS-SLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
+ P+ + A LI+ACS S G +VH ++ + DV + +++ YG G + +A
Sbjct: 841 VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNA 900
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
+ F++MP NVVSWT+++ G S + + + +Y +M Q GV Q TF ++ +C L
Sbjct: 901 QKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLL 960
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
LG Q+ H+I+ + N+LI+M++ F + +A VF + D+ SW +MI
Sbjct: 961 EDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMI 1020
Query: 210 AAFSKLGYELEALCHFNEMLH-----------------------------HG-----AYQ 235
+A++ G E+L F+ M H HG
Sbjct: 1021 SAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLD 1080
Query: 236 PNEFIFGSVFSACSNFAR-----ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
N I ++ + S R ++F + DL SWN+++A + + + +E+
Sbjct: 1081 SNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAEL 1140
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ + +T S L AC L + VH+ II GF + V NA++TMY K ++
Sbjct: 1141 LQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMM 1200
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
A V + + D V+WN++I ++ + E + + + I ++IT V+GA
Sbjct: 1201 MEAKKVLQTM-PQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGA 1259
Query: 411 CAKMAS-LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
C+ L+ +H +I TG D +V N L+ +Y KCG L S+ +F+ + N ++
Sbjct: 1260 CSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPIT 1319
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG-------- 521
W++++ A GCG+EALK+F MR++GV+ + + G L A +++ ++EEG
Sbjct: 1320 WNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVI 1379
Query: 522 -------LHLYRIMENEYG----------IIP-----TREHCSCVVDLLARAGCVHEAED 559
LH+ + YG ++P +R + ++ AR GC +A +
Sbjct: 1380 KLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARE 1439
Query: 560 FINQM---ACDADIVVWKSLLAS 579
++M D V + SLL++
Sbjct: 1440 TFHEMLKLGPKPDHVTFVSLLSA 1462
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 244/509 (47%), Gaps = 43/509 (8%)
Query: 46 SSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWT 105
S + S G+ +H ++ + N ++NMY K G++E AR FD+M RN SW+
Sbjct: 755 SEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWS 814
Query: 106 AMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC-LGRQLHAHVIK 164
M++G + +A+ L+ QM GV P F S+I ACS G + G Q+H V+K
Sbjct: 815 TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVK 874
Query: 165 SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCH 224
+ + AL+ Y + +A+ +F + +V SW S++ +S G E L
Sbjct: 875 TGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNV 934
Query: 225 FNEMLHHGAYQPNEFIFGSVFSAC-----------------------------------S 249
+ M G N+ F +V S+C S
Sbjct: 935 YQRMRQEGV-SGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFS 993
Query: 250 NFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
+F+ + +F+ ++ D+ SWNA+I+ A H E++ F MR + T+ S
Sbjct: 994 SFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSS 1053
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
LL C L G +H ++K+G DSNV +CN +LT+Y++ +A LVF+ + +
Sbjct: 1054 LLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTER- 1112
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
D +SWNS++A +Q + + ++ + +L +H+TF + AC+ L +H
Sbjct: 1113 DLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVH 1172
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
I G + V N L+ +Y K G + A+K+ M PD V+W++LI G+A+ +
Sbjct: 1173 ALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPN 1232
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACS 513
EA+K + +R G+ N +T+V VL ACS
Sbjct: 1233 EAVKAYKLIREKGIPANYITMVSVLGACS 1261
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 151/570 (26%), Positives = 255/570 (44%), Gaps = 56/570 (9%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+ S C EAL S N T R+ PS Y ++ C ++ + G +H H++ +
Sbjct: 5 IQSACNLGRLAEALKL--LSSNPT--RLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNG 60
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
D+ L ++ Y K G + AR FD MP+R+VVSWTAM++G SQN + A L+
Sbjct: 61 FGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFS 120
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M GV QFT+GS ++AC+ L + +G Q+ + K +L ++AL+ ++K
Sbjct: 121 DMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCG 180
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
++ DA +F + +DV SW +MI ++ G+ ++ C F ML G P+ + GSV
Sbjct: 181 KMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSML-RGGLVPDCYTLGSVL 239
Query: 246 SACSNFAR-ILFNEID---------------------------------------SPDLA 265
A + I+ N+I DL
Sbjct: 240 RASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLF 299
Query: 266 SWNALIAGVASHS-NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
S ALI G A + +A+ LF EM + D + + S+L C + G Q+H++
Sbjct: 300 SSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAF 359
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
+K +V + NA++ MYAK + +A F E+ + + +SW S+I+ +H
Sbjct: 360 ALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEM-EEKNVISWTSLISGYAKHGYGHM 418
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMA-SLEMVTQLHCYITKTGLAFDVFVMNGLM 443
L+ +M + KP+ +TF ++ AC+ + E + + K + + ++
Sbjct: 419 AVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMV 478
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILG----YAQFGCGDEALKLFTRMRSLGVS 499
D++ + G L A L ++ S ILG Y G EA M+ S
Sbjct: 479 DLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPEN-S 537
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
N V L + +A GL ++ + ++ME
Sbjct: 538 VNYVVLASIYSA---AGLWDDAWKIRKLME 564
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/488 (25%), Positives = 213/488 (43%), Gaps = 67/488 (13%)
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
+K S + S G+ LHA I + N LI MY+KF I AR VF + ++
Sbjct: 751 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------- 251
SW +M++ + ++G EA+ F +M G +PN F+ S+ +ACS
Sbjct: 811 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGV-EPNGFMVASLITACSRSGYMADEGFQVH 869
Query: 252 ------------------------------ARILFNEIDSPDLASWNALIAGVASHSNAN 281
A+ LF E+ ++ SW +L+ G + N
Sbjct: 870 GFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPG 929
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
E ++++ MR + + T ++ +C G QV +II+ GF+ +V V N+++
Sbjct: 930 EVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLI 989
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+M++ S + A VF + + D +SWN++I+A H E R F M + +
Sbjct: 990 SMFSSFSSVEEACYVFDHMNE-CDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNS 1048
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
T + ++ C+ + +L+ +H + K GL +V + N L+ +Y + G A +F
Sbjct: 1049 TTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQA 1108
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS-------- 513
M D++SW+S++ Y Q G + LK+ + +G N VT L ACS
Sbjct: 1109 MTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES 1168
Query: 514 ---HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
H ++ G H + I+ N +V + + G + EA+ + M D
Sbjct: 1169 KIVHALIIVAGFHDFLIVGN------------ALVTMYGKLGMMMEAKKVLQTMP-QPDR 1215
Query: 571 VVWKSLLA 578
V W +L+
Sbjct: 1216 VTWNALIG 1223
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 188/427 (44%), Gaps = 47/427 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+A ++ACS+ L + VH I+++ +++ N ++ MYGK G + +A+ M
Sbjct: 1151 TFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTM 1210
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL-G 155
PQ + V+W A+I G ++N + N+A+K Y + + G+ T S++ ACS + G
Sbjct: 1211 PQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHG 1270
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+HAH++ + S +N+LI MY K + + +F G+ K +W +M+AA +
Sbjct: 1271 MPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHH 1330
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA----------------------- 252
G EAL F EM + G ++F F +A +N A
Sbjct: 1331 GCGEEALKIFGEMRNVGV-NLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHV 1389
Query: 253 ------------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
++L I+ L SWN LI+ A H +A F EM
Sbjct: 1390 TNAAMDMYGKCGEMHDVLKMLPQPINRSRL-SWNILISAFARHGCFQKARETFHEMLKLG 1448
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNA 353
PD +T SLL AC + +G+ + + + G + C I+ + + L +A
Sbjct: 1449 PKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHA 1508
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD--HITFNDVMGAC 411
KE+ + ++W S++AAC H E + +L D ++ +++V
Sbjct: 1509 EGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATS 1568
Query: 412 AKMASLE 418
K +E
Sbjct: 1569 GKWEDVE 1575
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 69/128 (53%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
N + + +++G ++A ++L L+ G+++H ++ + D+ + N ++MYGKCG +
Sbjct: 1345 NVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMH 1404
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
D + R+ +SW +I+ +++ A + + +ML+ G P TF S++ AC+
Sbjct: 1405 DVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACN 1464
Query: 148 GLGSVCLG 155
G V G
Sbjct: 1465 HGGLVDEG 1472
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 190/602 (31%), Positives = 304/602 (50%), Gaps = 49/602 (8%)
Query: 24 FSQNNTNIR--IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNM 79
F NT +R ++P TY ++ CS ++ GR+VH DV + N +L
Sbjct: 122 FGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAF 181
Query: 80 YGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML--QSGVMPGQF 137
YG CG DA FD+MP+R+ VSW +I CS + +A+ + M+ + G+ P
Sbjct: 182 YGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLV 241
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIK-SEHGSHLIAQNALIAMYTKFDRILDARNVFSG 196
T S++ C+ + R +H + +K G H+ NAL+ +Y K ++ VF
Sbjct: 242 TVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDE 301
Query: 197 IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG------------------------ 232
I ++V SW ++I +FS G ++AL F M+ G
Sbjct: 302 IDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLG 361
Query: 233 ----------AYQPNEFIFGSVF-----SACSNFARILFNEIDSPDLASWNALIAGVASH 277
A + + FI S+ S S A +FN++ ++ SWNA+IA A +
Sbjct: 362 MEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARN 421
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
EA+ L +M+ + P+ +T ++L AC L G ++H+ II++G ++ V
Sbjct: 422 RLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVS 481
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
NA+ MY+KC L A VF + D VS+N +I + N + E RLFS M +
Sbjct: 482 NALTDMYSKCGCLNLAQNVFNISVR--DEVSYNILIIGYSRTNDSLESLRLFSEMRLLGM 539
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
+PD ++F V+ ACA +A + ++H + + +FV N L+D+Y +CG + A K
Sbjct: 540 RPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATK 599
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
+F ++N DV SW+++ILGY G D A+ LF M+ GV + V+ V VL+ACSH GL
Sbjct: 600 VFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGL 659
Query: 518 VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+E+G +++M + I PT H +C+VDLL RAG + EA D I ++ D +W +LL
Sbjct: 660 IEKGRKYFKMM-CDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIPDTNIWGALL 718
Query: 578 AS 579
+
Sbjct: 719 GA 720
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 153/542 (28%), Positives = 263/542 (48%), Gaps = 50/542 (9%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQP-DVVLQNHILNMYGKCGSLEDARM 91
++ S L+ C+ +L ++VH + LL P V L ++ Y G ++ +
Sbjct: 32 LQTSNPPNLLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLL 91
Query: 92 GFDK--MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F R+ W +I S D Y M+++GV P + T+ ++K CS
Sbjct: 92 LFQHSVAYSRSAFLWNTLIRANSIA-GVFDGFGTYNTMVRAGVKPDECTYPFVLKVCSDF 150
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
V GR++H K + N L+A Y DA VF + +D SW ++I
Sbjct: 151 VEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVI 210
Query: 210 AAFSKLGYELEALCHFNEML-HHGAYQPNEFIFGSVFSACSN-----FARI--------- 254
S G+ EAL F M+ QP+ SV C+ ARI
Sbjct: 211 GLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVG 270
Query: 255 ---------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
+F+EID ++ SWNA+I + +A+ +F
Sbjct: 271 LLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVF 330
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
M D + P+ +T+ S+L +G L L++ GM+VH + +KM +S+V + N+++ MYAK
Sbjct: 331 RLMIDEGMRPNSVTISSML-PVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAK 389
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
A +F ++G + VSWN++IA ++ E L +M A P+++TF +
Sbjct: 390 SGSSRIASTIFNKMGVR-NIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTN 448
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
V+ ACA++ L + ++H I + G + D+FV N L D+Y KCG L A+ +FN + D
Sbjct: 449 VLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRD 507
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
VS++ LI+GY++ E+L+LF+ MR LG+ P++V+ +GV++AC+++ + +G ++
Sbjct: 508 EVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHG 567
Query: 527 IM 528
++
Sbjct: 568 LL 569
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 184/585 (31%), Positives = 299/585 (51%), Gaps = 43/585 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T+A + S+C L LG +V HI+ + V + N +++M+ S+E+A FD
Sbjct: 298 NTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDH 357
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M + +++SW AMI+ + + ++++ + M T S++ CS + ++ G
Sbjct: 358 MNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWG 417
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R +H V+K S++ N L+ +Y++ R DA VF + +D+ SW SM+A + +
Sbjct: 418 RGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQD 477
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G L+ L E+L G N F S +ACSN
Sbjct: 478 GKCLDGLKILAELLQMGKVM-NHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIV 536
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A+ + + PD +WNALI G A + NEA+ + +R++ +
Sbjct: 537 GNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGI 596
Query: 296 LPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ +T+ S+L AC L + GM +H++I+ GF+S+ V N+++TMYAKC L ++
Sbjct: 597 PANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSN 656
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F LG N ++WN+++AA H EE ++F M + D +F+ + A A +
Sbjct: 657 YIFDGLG-NKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANL 715
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
A LE QLH + K G D+ V N MD+Y KCG + K+ N +SW+ LI
Sbjct: 716 AVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILI 775
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
+A+ GC +A + F M LG P+ VT V +L+AC+H GLV+EGL Y M E+G+
Sbjct: 776 SAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGV 835
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P EHC C++DLL R+G + AE FI +M + + W+SLLA+
Sbjct: 836 FPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAA 880
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 165/623 (26%), Positives = 294/623 (47%), Gaps = 77/623 (12%)
Query: 33 IRPSTY--AGLISACS-SLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
+ P+ + A LI+ACS S G +VH ++ + DV + +++ YG G + +A
Sbjct: 191 VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNA 250
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
+ F++MP NVVSWT+++ G S + + + +Y +M Q GV Q TF ++ +C L
Sbjct: 251 QKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLL 310
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
LG Q+ H+I+ + N+LI+M++ F + +A VF + D+ SW +MI
Sbjct: 311 EDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMI 370
Query: 210 AAFSKLGYELEALCHFNEMLH-----------------------------HG-----AYQ 235
+A++ G E+L F+ M H HG
Sbjct: 371 SAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLD 430
Query: 236 PNEFIFGSVFSACSNFAR-----ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
N I ++ + S R ++F + DL SWN+++A + + + +E+
Sbjct: 431 SNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAEL 490
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ + +T S L AC L + VH+ II GF + V NA++TMY K ++
Sbjct: 491 LQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMM 550
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
A V + + + D V+WN++I ++ + E + + + I ++IT V+GA
Sbjct: 551 MEAKKVLQTMPQ-PDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGA 609
Query: 411 CAKMAS-LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
C+ L+ +H +I TG D +V N L+ +Y KCG L S+ +F+ + N ++
Sbjct: 610 CSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPIT 669
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG-------- 521
W++++ A GCG+EALK+F MR++GV+ + + G L A +++ ++EEG
Sbjct: 670 WNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVI 729
Query: 522 -------LHLYRIMENEYG----------IIP-----TREHCSCVVDLLARAGCVHEAED 559
LH+ + YG ++P +R + ++ AR GC +A +
Sbjct: 730 KLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARE 789
Query: 560 FINQM---ACDADIVVWKSLLAS 579
++M D V + SLL++
Sbjct: 790 TFHEMLKLGPKPDHVTFVSLLSA 812
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 244/509 (47%), Gaps = 43/509 (8%)
Query: 46 SSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWT 105
S + S G+ +H ++ + N ++NMY K G++E AR FD+M RN SW+
Sbjct: 105 SEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWS 164
Query: 106 AMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC-LGRQLHAHVIK 164
M++G + +A+ L+ QM GV P F S+I ACS G + G Q+H V+K
Sbjct: 165 TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVK 224
Query: 165 SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCH 224
+ + AL+ Y + +A+ +F + +V SW S++ +S G E L
Sbjct: 225 TGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNV 284
Query: 225 FNEMLHHGAYQPNEFIFGSVFSAC-----------------------------------S 249
+ M G N+ F +V S+C S
Sbjct: 285 YQRMRQEGV-SGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFS 343
Query: 250 NFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
+F+ + +F+ ++ D+ SWNA+I+ A H E++ F MR + T+ S
Sbjct: 344 SFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSS 403
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
LL C L G +H ++K+G DSNV +CN +LT+Y++ +A LVF+ + +
Sbjct: 404 LLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTER- 462
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
D +SWNS++A +Q + + ++ + +L +H+TF + AC+ L +H
Sbjct: 463 DLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVH 522
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
I G + V N L+ +Y K G + A+K+ M PD V+W++LI G+A+ +
Sbjct: 523 ALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPN 582
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACS 513
EA+K + +R G+ N +T+V VL ACS
Sbjct: 583 EAVKAYKLIREKGIPANYITMVSVLGACS 611
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/488 (25%), Positives = 213/488 (43%), Gaps = 67/488 (13%)
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
+K S + S G+ LHA I + N LI MY+KF I AR VF + ++
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------- 251
SW +M++ + ++G EA+ F +M G +PN F+ S+ +ACS
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGV-EPNGFMVASLITACSRSGYMADEGFQVH 219
Query: 252 ------------------------------ARILFNEIDSPDLASWNALIAGVASHSNAN 281
A+ LF E+ ++ SW +L+ G + N
Sbjct: 220 GFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPG 279
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
E ++++ MR + + T ++ +C G QV +II+ GF+ +V V N+++
Sbjct: 280 EVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLI 339
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+M++ S + A VF + + D +SWN++I+A H E R F M + +
Sbjct: 340 SMFSSFSSVEEACYVFDHMNE-CDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNS 398
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
T + ++ C+ + +L+ +H + K GL +V + N L+ +Y + G A +F
Sbjct: 399 TTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQA 458
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS-------- 513
M D++SW+S++ Y Q G + LK+ + +G N VT L ACS
Sbjct: 459 MTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES 518
Query: 514 ---HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
H ++ G H + I+ N +V + + G + EA+ + M D
Sbjct: 519 KIVHALIIVAGFHDFLIVGN------------ALVTMYGKLGMMMEAKKVLQTMP-QPDR 565
Query: 571 VVWKSLLA 578
V W +L+
Sbjct: 566 VTWNALIG 573
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 188/427 (44%), Gaps = 47/427 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+A ++ACS+ L + VH I+++ +++ N ++ MYGK G + +A+ M
Sbjct: 501 TFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTM 560
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL-G 155
PQ + V+W A+I G ++N + N+A+K Y + + G+ T S++ ACS + G
Sbjct: 561 PQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHG 620
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+HAH++ + S +N+LI MY K + + +F G+ K +W +M+AA +
Sbjct: 621 MPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHH 680
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA----------------------- 252
G EAL F EM + G ++F F +A +N A
Sbjct: 681 GCGEEALKIFGEMRNVGV-NLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHV 739
Query: 253 ------------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
++L I+ L SWN LI+ A H +A F EM
Sbjct: 740 TNAAMDMYGKCGEMHDVLKMLPQPINRSRL-SWNILISAFARHGCFQKARETFHEMLKLG 798
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNA 353
PD +T SLL AC + +G+ + + + G + C I+ + + L +A
Sbjct: 799 PKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHA 858
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD--HITFNDVMGAC 411
KE+ + ++W S++AAC H E + +L D ++ +++V
Sbjct: 859 EGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATS 918
Query: 412 AKMASLE 418
K +E
Sbjct: 919 GKWEDVE 925
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 69/128 (53%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
N + + +++G ++A ++L L+ G+++H ++ + D+ + N ++MYGKCG +
Sbjct: 695 NVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMH 754
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
D + R+ +SW +I+ +++ A + + +ML+ G P TF S++ AC+
Sbjct: 755 DVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACN 814
Query: 148 GLGSVCLG 155
G V G
Sbjct: 815 HGGLVDEG 822
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 174/563 (30%), Positives = 282/563 (50%), Gaps = 67/563 (11%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
L+ R++ D I L++ +V N +L+M+ K G L DAR F +MP+R+ VSWT M+ G
Sbjct: 81 LRDARRLFDEIPLAR--RNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVG 138
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
++ + +AIK + M G P QFT +++ +C+ + +GR++H+ V+K GS
Sbjct: 139 LNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSC 198
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
+ N+++ MY K A VF + + V+SW +M++ + LG
Sbjct: 199 VPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGR------------- 245
Query: 231 HGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ A LF + + SWNA+IAG + +A+ LFS M
Sbjct: 246 ------------------MDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 287
Query: 291 -RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
+ + PD T+ S+L AC + G QVH+YI++ N V NA+++ YAK
Sbjct: 288 LHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGS 347
Query: 350 LCNALLVFKE--------------------------------LGKNADSVSWNSIIAACL 377
+ NA + + + N D V+W ++I
Sbjct: 348 VENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYE 407
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
Q+ + +E LF M+ +P+ T V+ CA +A L+ Q+HC ++ L
Sbjct: 408 QNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSS 467
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFM-ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
V N ++ +Y + GS AR++F+ + + ++W+S+I+ AQ G G+EA+ LF M
Sbjct: 468 VSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRA 527
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
GV P+ +T VGVL+ACSH G V EG Y ++NE+ I P H +C+VDLLARAG E
Sbjct: 528 GVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSE 587
Query: 557 AEDFINQMACDADIVVWKSLLAS 579
A++FI +M + D + W SLL++
Sbjct: 588 AQEFIRRMPVEPDAIAWGSLLSA 610
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 218/493 (44%), Gaps = 124/493 (25%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHIL---LSKCQPDVVLQNHILNMYGKCGSLEDA---- 89
T ++S+C+ ++ +GRKVH ++ L C P + N +LNMYGKCG E A
Sbjct: 166 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVP---VANSVLNMYGKCGDSETATTVF 222
Query: 90 ----------------------RMG-----FDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
RM F+ MP R++VSW AMIAG +QN + A+K
Sbjct: 223 ERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALK 282
Query: 123 LYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
L+ +ML +S + P +FT S++ AC+ LG+V +G+Q+HA+++++E + NALI+ Y
Sbjct: 283 LFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTY 342
Query: 182 TK------FDRILD---------------------------ARNVFSGIARKDVTSWGSM 208
K RI+D AR +F + +DV +W +M
Sbjct: 343 AKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAM 402
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------ 250
I + + G EA+ F M+ G +PN + +V S C++
Sbjct: 403 IVGYEQNGRNDEAIDLFRSMITCGP-EPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL 461
Query: 251 ----------------------FARILFNEI-DSPDLASWNALIAGVASHSNANEAMSLF 287
+AR +F+++ + +W ++I +A H EA+ LF
Sbjct: 462 LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLF 521
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII---KMGFDSNVPVCNAILTMY 344
EM + PD +T +L AC + +G + + I ++ + + C ++ +
Sbjct: 522 EEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYAC--MVDLL 579
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD---- 400
A+ + A + + D+++W S+++AC H A EL L + L S I P+
Sbjct: 580 ARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNA-ELAELAAEKLLS-IDPNNSGA 637
Query: 401 HITFNDVMGACAK 413
+ +V AC +
Sbjct: 638 YSAIANVYSACGR 650
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 190/414 (45%), Gaps = 66/414 (15%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK- 95
T ++SAC++L ++++G++VH +IL ++ + + N +++ Y K GS+E+AR D+
Sbjct: 299 TITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQS 358
Query: 96 --------------------------------MPQRNVVSWTAMIAGCSQNYQENDAIKL 123
M R+VV+WTAMI G QN + ++AI L
Sbjct: 359 METDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDL 418
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ M+ G P +T +++ C+ L + G+Q+H I+S NA+I MY +
Sbjct: 419 FRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYAR 478
Query: 184 FDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
AR +F + RK+ +W SMI A ++ G EA+ F EML G +P+ +
Sbjct: 479 SGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGV-EPDRITYV 537
Query: 243 SVFSACS-----NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
V SACS N + +++I +P+++ + ++ +A +EA M
Sbjct: 538 GVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRM-- 595
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK--MGFD-SNVPVCNAILTMYAKCSV 349
+ PD + SLL AC +++ ++ + + D +N +AI +Y+ C
Sbjct: 596 -PVEPDAIAWGSLLSAC----RVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGR 650
Query: 350 LCNALLVFKELGKNA----DSVSWNSIIAAC-------LQHNQAEELFRLFSRM 392
+A ++K + A SW I + + H Q + ++ + +RM
Sbjct: 651 WSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARM 704
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 142/332 (42%), Gaps = 76/332 (22%)
Query: 318 GMQVHSYIIKMGFDSNVPVCNAIL------------------------------------ 341
G +H+ +K G ++ +CN +L
Sbjct: 45 GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSL 104
Query: 342 -TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+M+AK L +A VF E+ + D+VSW ++ + + E + M A P
Sbjct: 105 LSMFAKSGRLADARGVFAEMPER-DAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPT 163
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS--------- 451
T +V+ +CA + + ++H ++ K GL V V N ++++Y KCG
Sbjct: 164 QFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFE 223
Query: 452 -------------------LGS---ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
LG A LF M + +VSW+++I GY Q G +ALKL
Sbjct: 224 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKL 283
Query: 490 FTRM-RSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVD 546
F+RM ++P+ T+ VL+AC+++G V G +H Y I+ E + + ++
Sbjct: 284 FSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAY-ILRTEMAY--NSQVTNALIS 340
Query: 547 LLARAGCVHEAEDFINQ-MACDADIVVWKSLL 577
A++G V A ++Q M D +++ + +LL
Sbjct: 341 TYAKSGSVENARRIMDQSMETDLNVISFTALL 372
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 101/191 (52%), Gaps = 23/191 (12%)
Query: 35 PSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
P++Y A ++S C+SL L G+++H + S + + N I+ MY + GS AR
Sbjct: 429 PNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRM 488
Query: 93 FDKMPQRN-VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD++ R ++WT+MI +Q+ Q +A+ L+ +ML++GV P + T+ ++ ACS G
Sbjct: 489 FDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGF 548
Query: 152 VCLGRQLHAHVIKSEHG-----SH------LIAQNALIAMYTKFDRILDARNVFSGIARK 200
V G++ + IK+EH SH L+A+ L + +F R +
Sbjct: 549 VNEGKRYYDQ-IKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMP--------VEP 599
Query: 201 DVTSWGSMIAA 211
D +WGS+++A
Sbjct: 600 DAIAWGSLLSA 610
>gi|255565124|ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537116|gb|EEF38749.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 611
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 183/548 (33%), Positives = 288/548 (52%), Gaps = 15/548 (2%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++ CS+L+SL G+++H I +S D + ++ MY C L A+ FDKMPQ N
Sbjct: 1 MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPN 60
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
V +WTA+ ++ + ++ Y M S V+P + F +++AC+ L G +H
Sbjct: 61 VYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHK 120
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
VI S+L N+LI MY K AR VF + +D+ SW SMI+ + G
Sbjct: 121 DVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADL 180
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVA 275
A+ N M G ++P+ + ++ A R + +I+ P++ SW LI+ +
Sbjct: 181 AVELLNCMRLDG-FEPDVVTWNTLMDAYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYS 239
Query: 276 SHSNANEAMSLFSEMRDRELL-PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+ ++ +F +M RE++ PD + S+L +C L G ++H Y KM ++
Sbjct: 240 KIGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVF 299
Query: 335 --PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
A+LTMYAKC + +A+ VF EL +D V+WN++I ++ + ++ F M
Sbjct: 300 YSSAGAALLTMYAKCGRIQDAINVF-ELMDKSDIVTWNAMILGFVELDLGKQAIECFREM 358
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGS 451
IK D T + ++ C L+ +H Y+ K+ L+ V V N ++ +Y KCG
Sbjct: 359 QRMDIKNDQTTISTILPVC----DLQYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGC 414
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+ SA +F M N DVVSW+++I G+ G G ALKL M G+ PN T VL+A
Sbjct: 415 VRSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLSA 474
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
CSH GLV+EG L+R M +Y I P EH SC+VD+LARAG +A FI++M + D
Sbjct: 475 CSHSGLVDEGFRLFRSMTEDYSITPRMEHYSCIVDMLARAGQFADAVTFIHKMPLEPDKS 534
Query: 572 VWKSLLAS 579
+W +LLA+
Sbjct: 535 IWGALLAA 542
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 164/371 (44%), Gaps = 45/371 (12%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
+PDVV N +++ Y + G ++A ++ Q N++SWT +I+ S+ + + +++++
Sbjct: 194 EPDVVTWNTLMDAYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQD 253
Query: 127 ML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGS--HLIAQNALIAMYTK 183
M+ + V P S++ +C +G++ G+++H + K E + + A AL+ MY K
Sbjct: 254 MIIREVVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAK 313
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM--------------- 228
RI DA NVF + + D+ +W +MI F +L +A+ F EM
Sbjct: 314 CGRIQDAINVFELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTTISTI 373
Query: 229 -----LHHG----AYQPNEFIFGSVFS------------ACSNFARILFNEIDSPDLASW 267
L +G AY SV + C A +F + + D+ SW
Sbjct: 374 LPVCDLQYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKDVVSW 433
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV-HSYII 326
N +I G H + A+ L EM + P+ T S+L AC + +G ++ S
Sbjct: 434 NTMIGGFGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLSACSHSGLVDEGFRLFRSMTE 493
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+ + I+ M A+ +A+ ++ D W +++AAC + +
Sbjct: 494 DYSITPRMEHYSCIVDMLARAGQFADAVTFIHKMPLEPDKSIWGALLAACRAYQNLD--- 550
Query: 387 RLFSRMLASQI 397
F R+ A Q+
Sbjct: 551 --FGRLAAEQL 559
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 279/540 (51%), Gaps = 65/540 (12%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N IL+ + K G+L+ AR FD++PQ + VSWT MI G + A+ +++M+ SG+
Sbjct: 83 NTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGIS 142
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P QFTF +++ +C+ ++ +G+++H+ V+K + N+L+ MY K + A+ V
Sbjct: 143 PTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVV 202
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR 253
F + KD ++W +MI+ + C F+ A
Sbjct: 203 FDRMRLKDTSTWNTMISMHMQF-------CQFD------------------------LAL 231
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGR 312
LF+++ PD+ SWN++I G A+ FS M + L PD T+ S+L AC R
Sbjct: 232 ALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANR 291
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG----------- 361
+L G Q+H++I++ D V NA+++MYAK + A + + G
Sbjct: 292 ESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTS 351
Query: 362 ---------------------KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
K+ D V+W ++I Q+ + LF M+ KP+
Sbjct: 352 LLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPN 411
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
+ T V+ + +ASL+ QLH + V V N L+ +Y + GS+ ARK+FN
Sbjct: 412 NYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFN 471
Query: 461 FM-ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ D ++W+S+IL AQ G G+EA++LF +M + + P+ +T VGVL+AC+HVGLVE
Sbjct: 472 HICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVE 531
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+G + +M+N + I PT H +C++DLL RAG + EA +FI M + D+V W SLL+S
Sbjct: 532 QGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSS 591
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 174/367 (47%), Gaps = 58/367 (15%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ C Q AL + F +++++ T ++SAC++ SL+LG+++H HI+
Sbjct: 246 NSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIV 305
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLE---------------------------------DA 89
+ + N +++MY K G++E A
Sbjct: 306 RADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPA 365
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD + R+VV+WTAMI G +QN +DA+ L+ M++ G P +T +++ S L
Sbjct: 366 RAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSL 425
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI-ARKDVTSWGSM 208
S+ G+QLHA I+ E S + NALI MY++ I DAR +F+ I + +D +W SM
Sbjct: 426 ASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSM 485
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS-- 261
I + ++ G EA+ F +ML +P+ + V SAC++ + FN + +
Sbjct: 486 ILSLAQHGLGNEAIELFEKMLRIN-LKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVH 544
Query: 262 ---PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
P + + +I + EA ++ +R+ + PD + SLL +C
Sbjct: 545 NIEPTSSHYACMIDLLGRAGLLEEA---YNFIRNMPIEPDVVAWGSLLSSC--------- 592
Query: 319 MQVHSYI 325
+VH Y+
Sbjct: 593 -RVHKYV 598
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 194/463 (41%), Gaps = 116/463 (25%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I P+ T+ ++++C++ ++L +G+KVH ++ V + N +LNMY KCG A+
Sbjct: 141 ISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAK 200
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ--------------------- 129
+ FD+M ++ +W MI+ Q Q + A+ L+ QM
Sbjct: 201 VVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIR 260
Query: 130 -----------SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
S + P +FT GS++ AC+ S+ LG+Q+HAH+++++ NALI
Sbjct: 261 ALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALI 320
Query: 179 AMYTK-----------------------FDRILD----------ARNVFSGIARKDVTSW 205
+MY K F +LD AR +F + +DV +W
Sbjct: 321 SMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAW 380
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------- 251
+MI +++ G +AL F M+ G +PN + +V S S+
Sbjct: 381 TAMIVGYAQNGLISDALVLFRLMIREGP-KPNNYTLAAVLSVISSLASLDHGKQLHAVAI 439
Query: 252 --------------------------ARILFNEIDS-PDLASWNALIAGVASHSNANEAM 284
AR +FN I S D +W ++I +A H NEA+
Sbjct: 440 RLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAI 499
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA----I 340
LF +M L PD +T +L AC + QG SY M N+ ++ +
Sbjct: 500 ELFEKMLRINLKPDHITYVGVLSACTHVGLVEQG---KSYFNLMKNVHNIEPTSSHYACM 556
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ + + +L A + + D V+W S++++C H +
Sbjct: 557 IDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVD 599
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 184/578 (31%), Positives = 283/578 (48%), Gaps = 68/578 (11%)
Query: 38 YAGLISACSS---LRSLQLGRKVHDHILLSKCQ-PDVVLQNHILNMYGKCGSLEDARMGF 93
YA ++S+ + +++ VH IL + Q P L NH+L Y K G L AR F
Sbjct: 12 YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71
Query: 94 DKMP-------------------------------QRNVVSWTAMIAGCSQNYQENDAIK 122
D+MP +R+ VS+ A+I G S +++
Sbjct: 72 DEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQ 131
Query: 123 LYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
LY +L + V P + T ++I S L LG +H V++ G++ + L+ MY
Sbjct: 132 LYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMY 191
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K I DAR VF + K V + ++I + C E
Sbjct: 192 AKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR--------CKMIED------------- 230
Query: 242 GSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
A+ LF + D +W ++ G+ + EA+ +F MR + D T
Sbjct: 231 ----------AKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
S+L AC L +G Q+H+YI + ++ NV V +A++ MY+KC + A VF+ +
Sbjct: 281 FGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM- 339
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
+ +SW ++I Q+ +EE R FS M IKPD T V+ +CA +ASLE
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
Q HC +GL + V N L+ +Y KCGS+ A +LF+ M D VSW++L+ GYAQFG
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC 541
E + LF +M + G+ P+ VT +GVL+ACS GLVE+G + M+ ++GI+P +H
Sbjct: 460 KAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHY 519
Query: 542 SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+C++DL +R+G EAE+FI QM D W +LL+S
Sbjct: 520 TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 132/245 (53%), Gaps = 2/245 (0%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
V+ L + L EAL + + I T+ +++AC +L +L+ G+++H +I +
Sbjct: 250 VTGLTQNGLQLEALDVFR-RMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTW 308
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ +V + + +++MY KC S+ A F +M RN++SWTAMI G QN +A++ +
Sbjct: 309 YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFS 368
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M G+ P FT GS+I +C+ L S+ G Q H + S ++ NAL+ +Y K
Sbjct: 369 EMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG 428
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I DA +F ++ D SW +++ +++ G E + F +ML +G +P+ F V
Sbjct: 429 SIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANG-LKPDGVTFIGVL 487
Query: 246 SACSN 250
SACS
Sbjct: 488 SACSR 492
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 124/273 (45%), Gaps = 44/273 (16%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+P T +IS+C++L SL+ G + H L+S + + N ++ +YGKCGS+EDA
Sbjct: 375 IKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAH 434
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+M + VSWTA++ G +Q + + I L+ +ML +G+ P TF ++ ACS G
Sbjct: 435 RLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAG 494
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
V G + ++ +HG I + YT MI
Sbjct: 495 LVEKGCD-YFDSMQKDHGIVPIDDH-----YT------------------------CMID 524
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--------SNFARILFNEIDSP 262
+S+ G EA +M H P+ F + ++ S+C +A E D
Sbjct: 525 LYSRSGRFKEAEEFIKQMPH----SPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQ 580
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+ AS+ L + A+ E L MRDR++
Sbjct: 581 NPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQV 613
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 170/521 (32%), Positives = 278/521 (53%), Gaps = 46/521 (8%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
NH+LN+Y K +LE A F+++PQ +V SWT +I+G ++ D + L+ +M GV
Sbjct: 325 NHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVC 384
Query: 134 PGQFTFGSIIKACSG-LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
P QFT ++K+CS + +G+ +H ++++ + N+++ Y K A
Sbjct: 385 PNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEK 444
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA 252
+F +A KD SW M++++ ++G +++
Sbjct: 445 LFGLMAEKDTVSWNIMMSSYLQIGDMQKSVD----------------------------- 475
Query: 253 RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
LF ++ D ASWN +I G+ + A+ L +M + LT L
Sbjct: 476 --LFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSL 533
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA-------- 364
L G Q+H+ ++K+G + V N+++ MY KC + A ++FK L + +
Sbjct: 534 SVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEES 593
Query: 365 ------DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+SVSW+S+++ +Q+ + E+ + FS M+ SQ++ D T V+ ACA LE
Sbjct: 594 CDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLE 653
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
+ Q+H YI K G DVF+ + ++D+Y+KCGSL A +FN ++ +VV W+S+I G A
Sbjct: 654 LGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCA 713
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
G G EA++LF M + G++PN V+ VGVLTACSH GL+EEG +R+M YGI P
Sbjct: 714 LHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGA 773
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH +C+VDL RAG ++E ++FI+ A VW+S L+S
Sbjct: 774 EHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSS 814
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 122/229 (53%), Gaps = 16/229 (6%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T++ + SSL L LG+++H +L D ++N +++MY KCG +E A + F +
Sbjct: 522 TFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHL 581
Query: 97 PQRNV---------------VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
PQ + VSW++M++G QN + DA+K + M+ S V +FT S
Sbjct: 582 PQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTS 641
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
++ AC+ G + LGRQ+H ++ K HG + +++I MY K + DA +F+ ++
Sbjct: 642 VVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRN 701
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
V W SMI+ + G EA+ F M++ G PNE F V +ACS+
Sbjct: 702 VVLWTSMISGCALHGQGREAVRLFELMINEG-ITPNEVSFVGVLTACSH 749
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 85/145 (58%), Gaps = 1/145 (0%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VS + + +AL + F + + + T ++SAC+S L+LGR+VH +I
Sbjct: 608 VSGYVQNGRFEDALKTFSF-MICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIG 666
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
DV L + I++MY KCGSL DA + F++ RNVV WT+MI+GC+ + Q +A++L+
Sbjct: 667 HGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFE 726
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLG 150
M+ G+ P + +F ++ ACS G
Sbjct: 727 LMINEGITPNEVSFVGVLTACSHAG 751
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 101/488 (20%), Positives = 192/488 (39%), Gaps = 98/488 (20%)
Query: 37 TYAGLISACSS-LRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC------------ 83
T + ++ +CSS + ++G+ +H IL + D VL N IL+ Y KC
Sbjct: 389 TLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGL 448
Query: 84 -------------------GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
G ++ + F ++P ++ SW MI G +N E A++L
Sbjct: 449 MAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELL 508
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
+M+ +G + TF + S L + LG+Q+H V+K +N+LI MY K
Sbjct: 509 YKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKC 568
Query: 185 DRILDARNVFSGIARK---------------DVTSWGSMIAAFSKLGYELEALCHFNEML 229
+ A +F + ++ + SW SM++ + + G +AL F+ M+
Sbjct: 569 GEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMI 628
Query: 230 HHGAYQPNEFIFGSVFSACS---------------------------------------- 249
+ ++F SV SAC+
Sbjct: 629 -CSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSL 687
Query: 250 NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
N A ++FN+ ++ W ++I+G A H EA+ LF M + + P+ ++ +L AC
Sbjct: 688 NDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTAC 747
Query: 310 IGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS 368
L +G + + ++ G ++ +Y + L + S
Sbjct: 748 SHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSV 807
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKP----DHITFNDVMGACAKMASLEMVTQLH 424
W S +++C H E + ++L +++P +I F+ + CA E ++
Sbjct: 808 WRSFLSSCRVHKNIEMGIWVCKKLL--ELEPFDAGPYILFSSI---CATEHRWEEAAKIR 862
Query: 425 CYITKTGL 432
+ + G+
Sbjct: 863 SLMQQRGV 870
>gi|302769798|ref|XP_002968318.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
gi|300163962|gb|EFJ30572.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
Length = 666
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 185/618 (29%), Positives = 303/618 (49%), Gaps = 82/618 (13%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+ +C ++SL G+ +H ++ S + + N ++NMYGKCGSL AR FD M R+V
Sbjct: 13 LKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALAREVFDGMDHRDV 72
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+SW A+I +Q +A++L+ M + G + P TF +++ AC ++ G ++ A
Sbjct: 73 ISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDPSALEAGDKIFA 132
Query: 161 HVIKSEHG---SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
V E G S ++ NAL+ MY+K + A VF + +DV SW ++I+A ++
Sbjct: 133 LV--EERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVSWNAIISALARHDR 190
Query: 218 ELEALCHFNEMLHHG------AYQPNEFIFGSVFSACSNFARI----------------- 254
+ A+ F EM G A P+ F S +AC+ +
Sbjct: 191 KDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGREIHALVIERGCES 250
Query: 255 -----------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
F ++ ++ SWNA+IA H+ EA +F +M+
Sbjct: 251 ELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRIFHQMQ 310
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ P+ +T + L AC G+Q+HS + + G +++ V NA++ M+AKC L
Sbjct: 311 LEGVQPNSVTFVTFLSACSTPAAFEDGLQLHSIVRESGLEADASVGNAVVHMFAKCWSLD 370
Query: 352 NALLVFK------------------------------ELGKNADSVSWNSIIAACLQHNQ 381
+AL F+ E+ + D ++WN I+ A ++
Sbjct: 371 DALAAFQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEERDVITWNMILGAYVEREM 430
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
A+E RLF RM+A K + IT+ ++GACA A L ++H I + G ++FV N
Sbjct: 431 AKEAVRLFRRMIAEGTKSNSITWTTMLGACAGEALLAEGRRIHELIGERGADSELFVGNA 490
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+D++ KC SLG AR+ F + D SW+ L+ AQ G +EALK F +M+ G+ P
Sbjct: 491 LVDMFGKCASLGGARQAFERIRGKDASSWNVLVAALAQNGDAEEALKQFLQMQREGIKPT 550
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
VT + V ACSH G +E+ ++ + ++YGI P H S + DLL RAG + EAE+ I
Sbjct: 551 DVTFIVVFWACSHAGRLEQAKTIFASLRHDYGIAPLPSHYSGMTDLLGRAGFLDEAEEVI 610
Query: 562 NQMACDADIVVWKSLLAS 579
++ D + W +LL++
Sbjct: 611 KRIPFSQDELPWMTLLSA 628
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 144/477 (30%), Positives = 234/477 (49%), Gaps = 80/477 (16%)
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G++P +F + +K+C + S+ G+ +H VI+S + + NAL+ MY K + A
Sbjct: 1 GLLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALA 60
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
R VF G+ +DV SW ++I A+++ G+ EA+ F M G +P+ F +V SAC +
Sbjct: 61 REVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCD 120
Query: 251 -----------------------------------------FARILFNEIDSPDLASWNA 269
A ++F + D+ SWNA
Sbjct: 121 PSALEAGDKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVSWNA 180
Query: 270 LIAGVASHSNANEAMSLFSEM-------RDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+I+ +A H + AM F EM ++ LLPDG T+ S L AC G L +G ++H
Sbjct: 181 IISALARHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGREIH 240
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ +I+ G +S + V NA+++MYA C L +AL F+++ + + VSWN++IAA + HN
Sbjct: 241 ALVIERGCESELVVGNALVSMYANCGTLQDALECFQKMAQR-NVVSWNAMIAAYVHHNCD 299
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV---- 438
+E FR+F +M ++P+ +TF + AC+ A+ E QLH + ++GL D V
Sbjct: 300 KEAFRIFHQMQLEGVQPNSVTFVTFLSACSTPAAFEDGLQLHSIVRESGLEADASVGNAV 359
Query: 439 ---------------------------MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
NGL+ YI G L ARKLF ME DV++W+
Sbjct: 360 VHMFAKCWSLDDALAAFQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEERDVITWN 419
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
++ Y + EA++LF RM + G N +T +L AC+ L+ EG ++ ++
Sbjct: 420 MILGAYVEREMAKEAVRLFRRMIAEGTKSNSITWTTMLGACAGEALLAEGRRIHELI 476
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 154/556 (27%), Positives = 252/556 (45%), Gaps = 89/556 (16%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRK----VH 58
N +++ + EA+ + Q + I T+ ++SAC +L+ G K V
Sbjct: 76 NAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDPSALEAGDKIFALVE 135
Query: 59 DHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
+ LL DVVL N ++NMY KCGSL+ A M F++M R+VVSW A+I+ +++ +++
Sbjct: 136 ERGLLDS---DVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVSWNAIISALARHDRKD 192
Query: 119 DAIKLYIQMLQSGVMPGQ-------FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL 171
A++ + +M G+ P + FT S + AC+G + GR++HA VI+ S L
Sbjct: 193 IAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGREIHALVIERGCESEL 252
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH 231
+ NAL++MY + DA F +A+++V SW +MIAA+ + EA F++M
Sbjct: 253 VVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRIFHQMQLE 312
Query: 232 GAYQPNEFIFGSVFSACSN--------------------------------FAR------ 253
G QPN F + SACS FA+
Sbjct: 313 G-VQPNSVTFVTFLSACSTPAAFEDGLQLHSIVRESGLEADASVGNAVVHMFAKCWSLDD 371
Query: 254 --ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP-------------- 297
F I +L SWN L+ EA LF M +R+++
Sbjct: 372 ALAAFQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEERDVITWNMILGAYVEREMA 431
Query: 298 -----------------DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
+ +T ++L AC G L +G ++H I + G DS + V NA+
Sbjct: 432 KEAVRLFRRMIAEGTKSNSITWTTMLGACAGEALLAEGRRIHELIGERGADSELFVGNAL 491
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+ M+ KC+ L A F+ + + D+ SWN ++AA Q+ AEE + F +M IKP
Sbjct: 492 VDMFGKCASLGGARQAFERI-RGKDASSWNVLVAALAQNGDAEEALKQFLQMQREGIKPT 550
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
+TF V AC+ LE + + G+A +G+ D+ + G L A ++
Sbjct: 551 DVTFIVVFWACSHAGRLEQAKTIFASLRHDYGIAPLPSHYSGMTDLLGRAGFLDEAEEVI 610
Query: 460 NFME-NPDVVSWSSLI 474
+ + D + W +L+
Sbjct: 611 KRIPFSQDELPWMTLL 626
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 191/439 (43%), Gaps = 90/439 (20%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T A ++AC+ L+ GR++H ++ C+ ++V+ N +++MY CG+L+DA F KM
Sbjct: 219 TLASALAACTGPEMLEEGREIHALVIERGCESELVVGNALVSMYANCGTLQDALECFQKM 278
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
QRNVVSW AMIA + + +A +++ QM GV P TF + + ACS + G
Sbjct: 279 AQRNVVSWNAMIAAYVHHNCDKEAFRIFHQMQLEGVQPNSVTFVTFLSACSTPAAFEDGL 338
Query: 157 QLHAHVIKSEHGS---------HLIAQ----------------------NALIAMYTKFD 185
QLH+ V +S + H+ A+ N L+ Y
Sbjct: 339 QLHSIVRESGLEADASVGNAVVHMFAKCWSLDDALAAFQRIPQKNLGSWNGLLGAYIHVG 398
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
R+ +AR +F + +DV +W ++ A+ + EA+ F M+ G + N + ++
Sbjct: 399 RLAEARKLFEVMEERDVITWNMILGAYVEREMAKEAVRLFRRMIAEGT-KSNSITWTTML 457
Query: 246 SACSN----------------------------------------FARILFNEIDSPDLA 265
AC+ AR F I D +
Sbjct: 458 GACAGEALLAEGRRIHELIGERGADSELFVGNALVDMFGKCASLGGARQAFERIRGKDAS 517
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC--IGRL----TLYQGM 319
SWN L+A +A + +A EA+ F +M+ + P +T + AC GRL T++ +
Sbjct: 518 SWNVLVAALAQNGDAEEALKQFLQMQREGIKPTDVTFIVVFWACSHAGRLEQAKTIFASL 577
Query: 320 QVHSYIIKMGFDSNVPVCNAILT-MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
+ H Y I + +P + +T + + L A V K + + D + W ++++AC
Sbjct: 578 R-HDYGI-----APLPSHYSGMTDLLGRAGFLDEAEEVIKRIPFSQDELPWMTLLSACKV 631
Query: 379 HNQAEELFRLFSRMLASQI 397
H E R +A Q+
Sbjct: 632 HGDVER-----GRKVAGQV 645
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 156/294 (53%), Gaps = 12/294 (4%)
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
LLPD ++ + L +C+ +L G +H +I+ G + + V NA++ MY KC L A
Sbjct: 2 LLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALAR 61
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA-SQIKPDHITFNDVMGACAK 413
VF + + D +SWN++I A Q +E LF M +I+PD +TF V+ AC
Sbjct: 62 EVFDGM-DHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCD 120
Query: 414 MASLEMVTQLHCYITKTG-LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
++LE ++ + + G L DV + N L+++Y KCGSL SA +F M+ DVVSW++
Sbjct: 121 PSALEAGDKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVSWNA 180
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVS-------PNLVTLVGVLTACSHVGLVEEGLHLY 525
+I A+ D A++ F M+ G+S P+ TL L AC+ ++EEG ++
Sbjct: 181 IISALARHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGREIH 240
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++ E G + +V + A G + +A + +MA ++V W +++A+
Sbjct: 241 ALV-IERGCESELVVGNALVSMYANCGTLQDALECFQKMA-QRNVVSWNAMIAA 292
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 180/596 (30%), Positives = 298/596 (50%), Gaps = 46/596 (7%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
Q +++ L Y S T++ T+ L+ ACS L LG +H IL+S D
Sbjct: 39 QGAHHQVLATYA-SMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAY 97
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ + ++N Y K G + AR FD MP+RNVV WT +I S+ + +A L+ +M + G
Sbjct: 98 IASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQG 157
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
+ P T S++ S L V + LH I S + N+++ +Y K I +R
Sbjct: 158 IQPSSVTVLSLLFGVSELAHV---QCLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSR 214
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF 251
+F + +D+ SW S+I+A++++G E L M G ++ FGSV S ++
Sbjct: 215 KLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQG-FEAGPQTFGSVLSVAASR 273
Query: 252 ARI----------------------------------------LFNEIDSPDLASWNALI 271
+ +F D+ W A+I
Sbjct: 274 GELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMI 333
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
+G+ + +A++A+++F +M + P T+ S++ AC + G + YI++
Sbjct: 334 SGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQELP 393
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
+V N+++TMYAKC L + +VF + + D VSWN+++ Q+ E LF+
Sbjct: 394 LDVATQNSLVTMYAKCGHLDQSSIVFDMMNRR-DLVSWNAMVTGYAQNGYVCEALFLFNE 452
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M + PD IT ++ CA L + +H ++ + GL + V L+D+Y KCG
Sbjct: 453 MRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGD 512
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
L +A++ FN M + D+VSWS++I+GY G G+ AL+ +++ G+ PN V + VL++
Sbjct: 513 LDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSS 572
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
CSH GLVE+GL++Y M ++GI P EH +CVVDLL+RAG V EA + + D
Sbjct: 573 CSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAYNVYKKKFPD 628
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 132/247 (53%), Gaps = 6/247 (2%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPST--YAGLISACSSLRSLQLGRKVHDHILL 63
+S L + ++AL + + ++PST A +I+AC+ L S LG + +IL
Sbjct: 333 ISGLVQNGSADKALAVF---RQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILR 389
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
+ DV QN ++ MY KCG L+ + + FD M +R++VSW AM+ G +QN +A+ L
Sbjct: 390 QELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFL 449
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ +M P T S+++ C+ G + LG+ +H+ VI++ ++ +L+ MY K
Sbjct: 450 FNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCK 509
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
+ A+ F+ + D+ SW ++I + G AL +++ L G +PN IF S
Sbjct: 510 CGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGM-KPNHVIFLS 568
Query: 244 VFSACSN 250
V S+CS+
Sbjct: 569 VLSSCSH 575
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 157/322 (48%), Gaps = 13/322 (4%)
Query: 262 PDLASWNALIAGVASHSNA---NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ- 317
P A+ N++ A + HS ++ ++ ++ M + D T SLL AC L L+
Sbjct: 21 PHPATTNSVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKAC-SFLNLFSL 79
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G+ +H I+ G + + ++++ YAK A VF + + + V W +II
Sbjct: 80 GLTLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPER-NVVPWTTIIGCYS 138
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
+ + E F LF M I+P +T ++ +++A ++ LH G D+
Sbjct: 139 RTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHVQC---LHGCAILYGFMSDIN 195
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
+ N ++++Y KCG++ +RKLF++M++ D+VSW+SLI YAQ G E L L MR G
Sbjct: 196 LSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQG 255
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
T VL+ + G ++ G L+ +I+ + + E VV L + G +
Sbjct: 256 FEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYL--KGGKIDI 313
Query: 557 AEDFINQMACDADIVVWKSLLA 578
A + + D D+V+W ++++
Sbjct: 314 AFRMFER-SSDKDVVLWTAMIS 334
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 108/211 (51%), Gaps = 9/211 (4%)
Query: 373 IAACLQHNQAE----ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
+ A + H+ + ++ ++ ML + + D TF ++ AC+ + + LH I
Sbjct: 29 VNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRIL 88
Query: 429 KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
+GL+ D ++ + L++ Y K G ARK+F++M +VV W+++I Y++ G EA
Sbjct: 89 VSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFS 148
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLL 548
LF MR G+ P+ VT++ +L S + V + LH I+ YG + + ++++
Sbjct: 149 LFDEMRRQGIQPSSVTVLSLLFGVSELAHV-QCLHGCAIL---YGFMSDINLSNSMLNVY 204
Query: 549 ARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ G + + + M D+V W SL+++
Sbjct: 205 GKCGNIEYSRKLFDYMD-HRDLVSWNSLISA 234
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 103/195 (52%), Gaps = 6/195 (3%)
Query: 3 NDYVSSLCKQNLYNEALVAYD--FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDH 60
N V+ + EAL ++ S N T I T L+ C+S L LG+ +H
Sbjct: 431 NAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSI---TIVSLLQGCASTGQLHLGKWIHSF 487
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
++ + +P +++ +++MY KCG L+ A+ F++MP ++VSW+A+I G + + A
Sbjct: 488 VIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAA 547
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA-LIA 179
++ Y + L+SG+ P F S++ +CS G V G ++ + K + + +A ++
Sbjct: 548 LRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVD 607
Query: 180 MYTKFDRILDARNVF 194
+ ++ R+ +A NV+
Sbjct: 608 LLSRAGRVEEAYNVY 622
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 180/545 (33%), Positives = 284/545 (52%), Gaps = 55/545 (10%)
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G L AR FD++P + ++ A+I S + AI LY ML+ V P ++TF ++
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
KACS L + GR +HAH + + L ALI +Y + R ARNVF+ + +DV
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF----------GSVFSACS---- 249
+W +M+A ++ G A+ H +M HG +PN G++F S
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 250 --------NFARIL---------------------FNEIDSPDLASWNALIAGVASHSNA 280
N ++L F+ + + +W+ALI G
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 281 NEAMSLFSEMRDRELLPDGL------TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
EA +LF +M L +GL +V S L C L+ G Q+H+ I K G +++
Sbjct: 288 TEAFNLFKDM-----LVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADL 342
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
N++L+MYAK ++ A + F E+ D++S+ ++++ C+Q+ +AEE F +F +M A
Sbjct: 343 TASNSLLSMYAKAGLINEATMFFDEIAVK-DTISYGALLSGCVQNGKAEEAFLVFKKMQA 401
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
++PD T ++ AC+ +A+L+ H + GLA + + N L+D+Y KCG +
Sbjct: 402 CNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDL 461
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
+R++F+ M DVVSW+++I GY G G EA LF M++ G +P+ VT + ++ ACSH
Sbjct: 462 SRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSH 521
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
GLV EG H + M ++YGI+P EH C+VDLLAR G + EA FI M AD+ VW
Sbjct: 522 SGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWG 581
Query: 575 SLLAS 579
+LL +
Sbjct: 582 ALLGA 586
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 137/546 (25%), Positives = 238/546 (43%), Gaps = 59/546 (10%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
A D ++ R+ P+ T+ ++ ACS+L L+ GR +H H + D+ + +++
Sbjct: 84 AIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALID 143
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSGVMPGQF 137
+Y +C AR F KMP R+VV+W AM+AG + + + AI + M G+ P
Sbjct: 144 LYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNAS 203
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKS---EHGSHLIAQNALIAMYTKFDRILDARNVF 194
T S++ + G++ G +HA+ +++ ++ ++ AL+ MY K +++ A VF
Sbjct: 204 TLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVF 263
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS----- 249
G+ ++ +W ++I F EA F +ML G + S C+
Sbjct: 264 HGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADL 323
Query: 250 -----------------------------------NFARILFNEIDSPDLASWNALIAGV 274
N A + F+EI D S+ AL++G
Sbjct: 324 HMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGC 383
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+ A EA +F +M+ + PD T+ SL+ AC L G H +I G
Sbjct: 384 VQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALET 443
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
+CN+++ MYAKC + + VF ++ D VSWN++IA H +E LF M
Sbjct: 444 SICNSLIDMYAKCGKIDLSRQVFDKMPAR-DVVSWNTMIAGYGIHGLGKEATTLFLGMKN 502
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQ-LHCYIT---KTGLAFDVFVMNGLMDIYIKCG 450
PD +TF ++ AC+ +VT+ H + T K G+ + ++D+ + G
Sbjct: 503 QGFAPDDVTFICLIAACSHSG---LVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGG 559
Query: 451 SLGSARKLFNFME-NPDVVSWSSLILG---YAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
L A + M DV W +L+ + G + ++ ++ G N V L
Sbjct: 560 LLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTG-NFVLLS 618
Query: 507 GVLTAC 512
+ +A
Sbjct: 619 NIFSAA 624
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 159/350 (45%), Gaps = 17/350 (4%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
++ A + C+SL L +G ++H I S D+ N +L+MY K G + +A M FD+
Sbjct: 308 TSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDE 367
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ ++ +S+ A+++GC QN + +A ++ +M + P T S+I ACS L ++ G
Sbjct: 368 IAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHG 427
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ H VI N+LI MY K +I +R VF + +DV SW +MIA +
Sbjct: 428 KCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIH 487
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL-----FNEIDS-----PDLA 265
G EA F M + G + P++ F + +ACS+ + F+ + P +
Sbjct: 488 GLGKEATTLFLGMKNQG-FAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRME 546
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
+ ++ +A +EA M L D +LL AC + G QV I
Sbjct: 547 HYICMVDLLARGGLLDEAYQFIQSM---PLKADVRVWGALLGACRIHKNIDLGKQVSRII 603
Query: 326 IKMGFD--SNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSI 372
K+G + N + + I + + ++ K G K + SW I
Sbjct: 604 QKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEI 653
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
++ +I G L AR++F+ + PD ++++LI Y+ G A+ L+ M V+PN
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
T VL ACS + + G ++ G+ + ++DL R A +
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIH-AHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFA 159
Query: 563 QMACDADIVVWKSLLA 578
+M D+V W ++LA
Sbjct: 160 KMPM-RDVVAWNAMLA 174
>gi|302774170|ref|XP_002970502.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
gi|300162018|gb|EFJ28632.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
Length = 825
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 175/586 (29%), Positives = 302/586 (51%), Gaps = 47/586 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY L+ ACS L++G +H + S + L N ++ MYG+CG LEDAR F M
Sbjct: 203 TYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSM 262
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R++++W A+I Q+ +A+ LY MLQ G P + TF +++ +G ++ +
Sbjct: 263 VERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVK 322
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H+H+++S ++ AL+AMY+K + + D R +F + +++V SW M+ A++K G
Sbjct: 323 LVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHG 382
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------------------ 252
+A+ E + +P+ + + C+ A
Sbjct: 383 LGRKAV-QITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILW 441
Query: 253 ----------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
++F+ I ++ SW A++ + + + A+ LF + +
Sbjct: 442 NSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVK 501
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P +T L AC+G L +G VHS ++ G D++V + +A++ MY +C + +A
Sbjct: 502 PTCITFLEALDACVGAEALGKGRLVHSCAVQSGNDTDVSLGSALVAMYGRCGSIRDAKAC 561
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + + V+W+++IAA +QH Q E + M + TF + AC+ +A
Sbjct: 562 FDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLAD 621
Query: 417 LEMVTQLHCYITKTGLAFDV---FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
L ++H Y+ + FD V N L+ +Y KCGSL AR++F D++ W+++
Sbjct: 622 LREGKRIHSYVRER--RFDTEAATVTNSLVTMYGKCGSLDCAREVFETSRRQDIICWNAI 679
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I GYAQ G +A++LF RM+ GV+P+ VT V +L+ CSH GL++EG++ Y M E G
Sbjct: 680 ISGYAQHGQTRDAVELFHRMQQEGVTPDPVTFVCILSVCSHGGLLDEGVYAYASM-VELG 738
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ PT+++ +CV+DLL RAG + EAE+FI + I SLL+S
Sbjct: 739 LEPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETLTSLLSS 784
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 157/585 (26%), Positives = 284/585 (48%), Gaps = 50/585 (8%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y L+ AC L++L + R++H I+ + V L NH+++ YGKC SL+DA F++M
Sbjct: 3 YVRLLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMS 62
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+NV +WTA+I C+ ++ + AI L QML GV P T + + +C ++ G+
Sbjct: 63 YKNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKL 122
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H + +S H LI +NAL++MY + DA+ VF + ++V +W +MI A ++
Sbjct: 123 IHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAETSL 182
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------- 251
E +A F M G ++ N + ++ ACS
Sbjct: 183 E-QAFKVFRLMELEG-FKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCN 240
Query: 252 --------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
AR +F+ + D+ +WNALI H + EA+ L+ M P
Sbjct: 241 ALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKP 300
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D +T +LL G L VHS+I++ G N+ + A++ MY+KC L + +F
Sbjct: 301 DKVTFVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLF 360
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+++ + + +SWN ++ A +H + ++ M +KPD++T ++ C A L
Sbjct: 361 EKMPQR-NVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADL 419
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
++ ++H +I + D+ + N L+++Y +CG + A +F+ + +V+SW++++ Y
Sbjct: 420 KLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAY 479
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN---EYGI 534
++ D AL LF + GV P +T + L AC VG E L R++ + + G
Sbjct: 480 SRQNRQDMALLLFHAIHLSGVKPTCITFLEALDAC--VG--AEALGKGRLVHSCAVQSGN 535
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
S +V + R G + +A+ + + V W +++A+
Sbjct: 536 DTDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAA 580
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 150/589 (25%), Positives = 286/589 (48%), Gaps = 47/589 (7%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++P T +++C + ++L G+ +H I S Q D++L+N +++MYG CGS++DA+
Sbjct: 97 VKPDNITLLAALTSCETSQALPAGKLIHGLIAQSGHQCDLILENALVSMYGSCGSVDDAK 156
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD MP RNV++WTAMI ++ E A K++ M G T+ ++++ACS
Sbjct: 157 RVFDAMPARNVITWTAMIGAHAETSLEQ-AFKVFRLMELEGFKSNFVTYVTLVQACSKPE 215
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ +G LH ++S NALI MY + R+ DAR +FS + +D+ +W ++I
Sbjct: 216 FLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALIT 275
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV-------------------------- 244
+ + G+ EA+ + ML G +P++ F ++
Sbjct: 276 EYGQHGHVEEAVLLYQLMLQEGC-KPDKVTFVALLTMSNGPEALTDVKLVHSHIVESGVS 334
Query: 245 ------------FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+S C + R LF ++ ++ SWN ++ A H +A+ + M
Sbjct: 335 INIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYM 394
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ + PD +T LL C G L G +VH +I + ++++ + N++L MY +C +
Sbjct: 395 QLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEV 454
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
A +VF + + + +SW +++ A + N+ + LF + S +KP ITF + + A
Sbjct: 455 EQAEMVFDGILQR-NVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDA 513
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVS 469
C +L +H ++G DV + + L+ +Y +CGS+ A+ F+ E + V+
Sbjct: 514 CVGAEALGKGRLVHSCAVQSGNDTDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVT 573
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
WS++I + Q G E L+ M+ G+ + T L+ACS++ + EG ++ +
Sbjct: 574 WSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLREGKRIHSYVR 633
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +V + + G + A + + + + DI+ W ++++
Sbjct: 634 ERRFDTEAATVTNSLVTMYGKCGSLDCARE-VFETSRRQDIICWNAIIS 681
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 200/427 (46%), Gaps = 44/427 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N V++ K L +A+ ++ Q + ++ T GL++ C+ L+LGRKVH I
Sbjct: 372 NVMVTAYAKHGLGRKAVQITEYMQLD-GVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIA 430
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+C+ D++L N +LNMYG+CG +E A M FD + QRNV+SWTAM+ S+ +++ A+
Sbjct: 431 EGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALL 490
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ + SGV P TF + AC G ++ GR +H+ ++S + + + +AL+AMY
Sbjct: 491 LFHAIHLSGVKPTCITFLEALDACVGAEALGKGRLVHSCAVQSGNDTDVSLGSALVAMYG 550
Query: 183 KFDRILDARNVFSGI-ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
+ I DA+ F RK+ +W +MIAAF + G + E L H M G + F
Sbjct: 551 RCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQG-LDMSPATF 609
Query: 242 GSVFSACSNF-----------------------------------------ARILFNEID 260
S SACSN AR +F
Sbjct: 610 ASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETSR 669
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D+ WNA+I+G A H +A+ LF M+ + PD +T +L C L +G+
Sbjct: 670 RQDIICWNAIISGYAQHGQTRDAVELFHRMQQEGVTPDPVTFVCILSVCSHGGLLDEGVY 729
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
++ ++++G + ++ + + L A + LG + S++++C H
Sbjct: 730 AYASMVELGLEPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETLTSLLSSCKSHG 789
Query: 381 QAEELFR 387
+ R
Sbjct: 790 DVQRGRR 796
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 179/592 (30%), Positives = 296/592 (50%), Gaps = 57/592 (9%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNM----YGKCGSLEDARMGF 93
Y L++ ++ +S+ + +H H++ + HIL+ Y CG + AR F
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGG-----RVSGHILSTLSVTYALCGHITYARKLF 72
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV--MPGQFTFGSIIKACSGLGS 151
++MPQ +++S+ +I + +DAI ++I+M+ GV +P +T+ + KA L S
Sbjct: 73 EEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKS 132
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ LG +H +++S G QNAL+AMY F ++ AR+VF + +DV SW +MI+
Sbjct: 133 MKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISG 192
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
+ + GY +AL F+ M++ + I S+ C +
Sbjct: 193 YYRNGYMNDALMMFDWMVNESVDLDHATIV-SMLPVCGHLKDLEMGRNVHKLVEEKRLGD 251
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
AR +F+ ++ D+ +W +I G + A+ L M+
Sbjct: 252 KIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQ 311
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ P+ +T+ SL+ C L + G +H + ++ S++ + ++++MYAKC +
Sbjct: 312 FEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVD 371
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
VF K + W++IIA C+Q+ + LF RM ++P+ T N ++ A
Sbjct: 372 LCFRVFSGASK-YHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAY 430
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME----NPDV 467
A +A L +HCY+TKTG + GL+ +Y KCG+L SA K+FN ++ + DV
Sbjct: 431 AALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDV 490
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
V W +LI GY G G AL++F M GV+PN +T L ACSH GLVEEGL L+R
Sbjct: 491 VLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRF 550
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M Y + H +C+VDLL RAG + EA + I + + VW +LLA+
Sbjct: 551 MLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/522 (26%), Positives = 233/522 (44%), Gaps = 71/522 (13%)
Query: 11 KQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQP 68
++ LY++A+ + + ++ P TY + A L+S++LG VH IL S
Sbjct: 92 REGLYHDAISVF-IRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGR 150
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D +QN +L MY G +E AR FD M R+V+SW MI+G +N NDA+ ++ M+
Sbjct: 151 DKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMV 210
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
V T S++ C L + +GR +H V + G + +NAL+ MY K R+
Sbjct: 211 NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMD 270
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
+AR VF + R+DV +W MI +++ G ++E ++ +PN S+ S C
Sbjct: 271 EARFVFDRMERRDVITWTCMINGYTEDG-DVENALELCRLMQFEGVRPNAVTIASLVSVC 329
Query: 249 SNFARI---------------------------LFNEIDSPDL-------------ASWN 268
+ ++ ++ + DL W+
Sbjct: 330 GDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWS 389
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
A+IAG + ++A+ LF MR ++ P+ T++SLL A L Q M +H Y+ K
Sbjct: 390 AIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT 449
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVF---KELGKNADSVSWNSIIAACLQHNQAEEL 385
GF S++ ++ +Y+KC L +A +F +E K+ D V W ++I+ H
Sbjct: 450 GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNA 509
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG---- 441
++F M+ S + P+ ITF + AC+ H + + GL F++
Sbjct: 510 LQVFMEMVRSGVTPNEITFTSALNACS-----------HSGLVEEGLTLFRFMLEHYKTL 558
Query: 442 --------LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + G L A L + P W +L+
Sbjct: 559 ARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALL 600
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 190/428 (44%), Gaps = 51/428 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + N+AL+ +D+ N + + + +T ++ C L+ L++GR VH +
Sbjct: 187 NTMISGYYRNGYMNDALMMFDWMVNES-VDLDHATIVSMLPVCGHLKDLEMGRNVHKLVE 245
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + ++N ++NMY KCG +++AR FD+M +R+V++WT MI G +++ +A++
Sbjct: 246 EKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALE 305
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L M GV P T S++ C V G+ LH ++ + S +I + +LI+MY
Sbjct: 306 LCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYA 365
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K R+ VFSG ++ W ++IA + +AL F M +PN
Sbjct: 366 KCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV-EPNIATLN 424
Query: 243 S--------------------------------------VFSACSNF--ARILFNEID-- 260
S V+S C A +FN I
Sbjct: 425 SLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEK 484
Query: 261 --SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
S D+ W ALI+G H + + A+ +F EM + P+ +T S L AC + +G
Sbjct: 485 HKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEG 544
Query: 319 MQVHSYII---KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
+ + +++ K SN C I+ + + L A + + S W +++AA
Sbjct: 545 LTLFRFMLEHYKTLARSNHYTC--IVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602
Query: 376 CLQHNQAE 383
C+ H +
Sbjct: 603 CVTHENVQ 610
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 180/568 (31%), Positives = 289/568 (50%), Gaps = 44/568 (7%)
Query: 54 GRKVHDHILLSKC--QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGC 111
GR VH H++ + D+ N +LNMYGK G L AR FD+MP+RN+VS+ ++
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137
Query: 112 SQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL 171
+Q A L+ ++ G QF +++K + + L +H+ K H +
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH 231
+ LI Y+ + DA +VF+GI RKD W +M++ +S+ A F++M
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVS 257
Query: 232 GAYQPNEFIFGSVFSA--------------------------------------CSNF-- 251
G +PN F SV A C +
Sbjct: 258 GC-KPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKD 316
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR+ F I D+ + +I+ A + +A LF + +LP+ ++ S+L AC
Sbjct: 317 ARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTN 376
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+ L G Q+H++ IK+G +S++ V NA++ YAKC+ + ++L +F L ++A+ VSWN+
Sbjct: 377 MVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL-RDANEVSWNT 435
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
I+ Q EE +F M A+Q+ +T++ V+ ACA AS+ Q+HC I K+
Sbjct: 436 IVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKST 495
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
D + N L+D Y KCG + A K+F + D++SW+++I GYA G +AL+LF
Sbjct: 496 FNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFD 555
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
RM V N +T V +L+ CS GLV GL L+ M ++GI P+ EH +C+V LL RA
Sbjct: 556 RMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRA 615
Query: 552 GCVHEAEDFINQMACDADIVVWKSLLAS 579
G +++A FI + +VW++LL+S
Sbjct: 616 GRLNDALQFIGDIPSAPSAMVWRALLSS 643
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 207/446 (46%), Gaps = 53/446 (11%)
Query: 34 RPSTYA--GLISACSSLRSLQLGRKVHDHIL--LSKCQPDVVLQNHILNMYGKCGSLEDA 89
+P+ +A ++ A L S+ LG+ +H + L+ +P V +L+MY KCG ++DA
Sbjct: 260 KPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHV--GGALLDMYAKCGDIKDA 317
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R+ F+ +P +V+ + MI+ +Q+ Q A +L++++++S V+P +++ S+++AC+ +
Sbjct: 318 RLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNM 377
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
+ G+Q+H H IK H S L NAL+ Y K + + + +FS + + SW +++
Sbjct: 378 VQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIV 437
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQP-NEFIFGSVFSACSNFARI-------------- 254
FS+ G EAL F EM A P + + SV AC++ A I
Sbjct: 438 VGFSQSGLGEEALSVFCEM--QAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKST 495
Query: 255 --------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
+F + D+ SWNA+I+G A H A +A+ LF
Sbjct: 496 FNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFD 555
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYAKC 347
M + + +T +LL C + G+ + S I G ++ I+ + +
Sbjct: 556 RMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRA 615
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP-DHITFND 406
L +AL ++ ++ W +++++C+ H FS +I+P D T+
Sbjct: 616 GRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVA--LGRFSAEKILEIEPQDETTYVL 673
Query: 407 VMGACAKMASLEMVTQLHCYITKTGL 432
+ A SL+ V L + G+
Sbjct: 674 LSNMYAAAGSLDQVALLRKSMRNIGV 699
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 10/247 (4%)
Query: 286 LFSEMRDRELLPDGLTVHSLLCA-----CIGRLTLYQGMQVHSYIIKMGFDSNVPV--CN 338
L E+ +LP V S CA CI R G VH ++++ G + + N
Sbjct: 41 LEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCAN 100
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
+L MY K L +A +F + + + VS+ +++ A Q E LF R+ +
Sbjct: 101 VLLNMYGKLGPLASARRLFDRMPER-NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE 159
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
+ ++ M + + +H K G + FV +GL+D Y C + A +
Sbjct: 160 VNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHV 219
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA--CSHVG 516
FN + D V W++++ Y++ C + A ++F++MR G PN L VL A C
Sbjct: 220 FNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSV 279
Query: 517 LVEEGLH 523
++ +G+H
Sbjct: 280 VLGKGIH 286
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 180/545 (33%), Positives = 284/545 (52%), Gaps = 55/545 (10%)
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G L AR FD++P + ++ A+I S + AI LY ML+ V P ++TF ++
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
KACS L + GR +HAH + + L ALI +Y + R ARNVF+ + +DV
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF----------GSVFSACS---- 249
+W +M+A ++ G A+ H +M HG +PN G++F S
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 250 --------NFARIL---------------------FNEIDSPDLASWNALIAGVASHSNA 280
N ++L F+ + + +W+ALI G
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 281 NEAMSLFSEMRDRELLPDGL------TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
EA +LF +M L +GL +V S L C L+ G Q+H+ I K G +++
Sbjct: 288 TEAFNLFKDM-----LVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADL 342
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
N++L+MYAK ++ A + F E+ D++S+ ++++ C+Q+ +AEE F +F +M A
Sbjct: 343 TASNSLLSMYAKAGLINEATMFFDEIAVK-DTISYGALLSGCVQNGKAEEAFLVFKKMQA 401
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
++PD T ++ AC+ +A+L+ H + GLA + + N L+D+Y KCG +
Sbjct: 402 CNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDL 461
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
+R++F+ M DVVSW+++I GY G G EA LF M++ G +P+ VT + ++ ACSH
Sbjct: 462 SRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSH 521
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
GLV EG H + M ++YGI+P EH C+VDLLAR G + EA FI M AD+ VW
Sbjct: 522 SGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWG 581
Query: 575 SLLAS 579
+LL +
Sbjct: 582 ALLGA 586
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 137/546 (25%), Positives = 238/546 (43%), Gaps = 59/546 (10%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
A D ++ R+ P+ T+ ++ ACS+L L+ GR +H H + D+ + +++
Sbjct: 84 AIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALID 143
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSGVMPGQF 137
+Y +C AR F KMP R+VV+W AM+AG + + + AI + M G+ P
Sbjct: 144 LYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNAS 203
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKS---EHGSHLIAQNALIAMYTKFDRILDARNVF 194
T S++ + G++ G +HA+ +++ ++ ++ AL+ MY K +++ A VF
Sbjct: 204 TLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVF 263
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS----- 249
G+ ++ +W ++I F EA F +ML G + S C+
Sbjct: 264 HGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADL 323
Query: 250 -----------------------------------NFARILFNEIDSPDLASWNALIAGV 274
N A + F+EI D S+ AL++G
Sbjct: 324 HMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGC 383
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+ A EA +F +M+ + PD T+ SL+ AC L G H +I G
Sbjct: 384 VQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALET 443
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
+CN+++ MYAKC + + VF ++ D VSWN++IA H +E LF M
Sbjct: 444 SICNSLIDMYAKCGKIDLSRQVFDKMPAR-DVVSWNTMIAGYGIHGLGKEATTLFLGMKN 502
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQ-LHCYIT---KTGLAFDVFVMNGLMDIYIKCG 450
PD +TF ++ AC+ +VT+ H + T K G+ + ++D+ + G
Sbjct: 503 QGFAPDDVTFICLIAACSHSG---LVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGG 559
Query: 451 SLGSARKLFNFME-NPDVVSWSSLILG---YAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
L A + M DV W +L+ + G + ++ ++ G N V L
Sbjct: 560 LLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTG-NFVLLS 618
Query: 507 GVLTAC 512
+ +A
Sbjct: 619 NIFSAA 624
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
++ +I G L AR++F+ + PD ++++LI Y+ G A+ L+ M V+PN
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
T VL ACS + + G ++ G+ + ++DL R A +
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIH-AHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFA 159
Query: 563 QMACDADIVVWKSLLA 578
+M D+V W ++LA
Sbjct: 160 KMPM-RDVVAWNAMLA 174
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 180/568 (31%), Positives = 289/568 (50%), Gaps = 44/568 (7%)
Query: 54 GRKVHDHILLSKC--QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGC 111
GR VH H++ + D+ N +LNMYGK G L AR FD+MP+RN+VS+ ++
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137
Query: 112 SQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL 171
+Q A L+ ++ G QF +++K + + L +H+ K H +
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH 231
+ LI Y+ + DA +VF+GI RKD W +M++ +S+ A F++M
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVS 257
Query: 232 GAYQPNEFIFGSVFSA--------------------------------------CSNF-- 251
G +PN F SV A C +
Sbjct: 258 GC-KPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKD 316
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR+ F I D+ + +I+ A + +A LF + +LP+ ++ S+L AC
Sbjct: 317 ARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTN 376
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+ L G Q+H++ IK+G +S++ V NA++ YAKC+ + ++L +F L ++A+ VSWN+
Sbjct: 377 MVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL-RDANEVSWNT 435
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
I+ Q EE +F M A+Q+ +T++ V+ ACA AS+ Q+HC I K+
Sbjct: 436 IVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKST 495
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
D + N L+D Y KCG + A K+F + D++SW+++I GYA G +AL+LF
Sbjct: 496 FNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFD 555
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
RM V N +T V +L+ CS GLV GL L+ M ++GI P+ EH +C+V LL RA
Sbjct: 556 RMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRA 615
Query: 552 GCVHEAEDFINQMACDADIVVWKSLLAS 579
G +++A FI + +VW++LL+S
Sbjct: 616 GRLNDALQFIGDIPSAPSAMVWRALLSS 643
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 207/446 (46%), Gaps = 53/446 (11%)
Query: 34 RPSTYA--GLISACSSLRSLQLGRKVHDHIL--LSKCQPDVVLQNHILNMYGKCGSLEDA 89
+P+ +A ++ A L S+ LG+ +H + L+ +P V +L+MY KCG ++DA
Sbjct: 260 KPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHV--GGALLDMYAKCGDIKDA 317
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R+ F+ +P +V+ + MI+ +Q+ Q A +L++++++S V+P +++ S+++AC+ +
Sbjct: 318 RLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNM 377
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
+ G+Q+H H IK H S L NAL+ Y K + + + +FS + + SW +++
Sbjct: 378 VQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIV 437
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQP-NEFIFGSVFSACSNFARI-------------- 254
FS+ G EAL F EM A P + + SV AC++ A I
Sbjct: 438 VGFSQSGLGEEALSVFCEM--QAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKST 495
Query: 255 --------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
+F + D+ SWNA+I+G A H A +A+ LF
Sbjct: 496 FNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFD 555
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYAKC 347
M + + +T +LL C + G+ + S I G ++ I+ + +
Sbjct: 556 RMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRA 615
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP-DHITFND 406
L +AL ++ ++ W +++++C+ H FS +I+P D T+
Sbjct: 616 GRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVA--LGRFSAEKILEIEPQDETTYVL 673
Query: 407 VMGACAKMASLEMVTQLHCYITKTGL 432
+ A SL+ V L + G+
Sbjct: 674 LSNMYAAAGSLDQVALLRKSMRNIGV 699
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 10/247 (4%)
Query: 286 LFSEMRDRELLPDGLTVHSLLCA-----CIGRLTLYQGMQVHSYIIKMGFDSNVPV--CN 338
L E+ +LP V S CA CI R G VH ++++ G + + N
Sbjct: 41 LEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCAN 100
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
+L MY K L +A +F + + + VS+ +++ A Q E LF R+ +
Sbjct: 101 VLLNMYGKLGPLASARRLFDRMPER-NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE 159
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
+ ++ M + + +H K G + FV +GL+D Y C + A +
Sbjct: 160 VNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHV 219
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA--CSHVG 516
FN + D V W++++ Y++ C + A ++F++MR G PN L VL A C
Sbjct: 220 FNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSV 279
Query: 517 LVEEGLH 523
++ +G+H
Sbjct: 280 VLGKGIH 286
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 173/551 (31%), Positives = 286/551 (51%), Gaps = 54/551 (9%)
Query: 41 LISACSSLRSLQLGRKVHDHIL----------LSKCQPDVVLQNHILNMYGKCGSLEDAR 90
L+ C +L+SL++ +H ++ LSK VL H L A
Sbjct: 8 LLHXCKTLQSLRI---IHAQMIKTGLHNTNYALSKLLEXCVLSPHF-------DGLPYAI 57
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD + + ++ W M G + + A+KLY+ M+ G++P +TF ++K+C+
Sbjct: 58 SVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSX 117
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ G+QLH V+K L +LI+MY + R+ DA+ V + +DV S+ ++I
Sbjct: 118 AFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALIT 177
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNAL 270
++ G +E+ A +F+EI D+ SWNA
Sbjct: 178 GYASRG-XIES------------------------------AHKMFDEIPVKDVVSWNAX 206
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I+G A N EA+ LF +M + PD T+ ++L AC ++ G QVHS+I GF
Sbjct: 207 ISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGF 266
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
N+ + NA++ +Y+KC L A +F+ L N D +SWN++I N +E LF
Sbjct: 267 GXNLKIVNALIDLYSKCGELETACGLFQGLS-NKDVISWNTLIGGYTHMNLYKEALLLFQ 325
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFDVFVMNGLMDIYIK 448
ML S KP+ +T ++ ACA + ++++ +H YI K G+ + L+D+Y K
Sbjct: 326 DMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAK 385
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
CG + +A+++F+ M N + SW+++I G+A G + A +F+RMR G+ P+ +T VG+
Sbjct: 386 CGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGL 445
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
L+ACSH G+++ G H++R M +Y ++P EH C++DL +G EAE IN M +
Sbjct: 446 LSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEP 505
Query: 569 DIVVWKSLLAS 579
D V+W SLL +
Sbjct: 506 DGVIWCSLLKA 516
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 185/421 (43%), Gaps = 75/421 (17%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM----- 91
T+ L+ +C+ + + G+++H +L D+ + +++MY + G LEDA+
Sbjct: 105 TFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKS 164
Query: 92 --------------------------GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
FD++P ++VVSW A I+G ++ +A++L+
Sbjct: 165 SHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFK 224
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M+++ V P + T +++ AC+ GS+ LGRQ+H+ + G +L NALI +Y+K
Sbjct: 225 KMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCG 284
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A +F G++ KDV SW ++I ++ + EAL F +ML G +PN+ S+
Sbjct: 285 ELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGE-KPNDVTMLSIL 343
Query: 246 SACSNFARI------------------------------------------LFNEIDSPD 263
SAC++ I +F+ + +
Sbjct: 344 SACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRS 403
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
L+SWNA+I G A H AN A +FS MR + PD +T LL AC L G +
Sbjct: 404 LSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFR 463
Query: 324 YIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ + + ++ + + A + + D V W S++ AC H
Sbjct: 464 SMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNV 523
Query: 383 E 383
E
Sbjct: 524 E 524
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 156/319 (48%), Gaps = 17/319 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + Y EAL + TN+R ST ++SAC+ S++LGR+VH I
Sbjct: 204 NAXISGYAETGNYKEALELFK-KMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWIN 262
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ + N ++++Y KCG LE A F + ++V+SW +I G + +A+
Sbjct: 263 DHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALL 322
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA--QNALIAM 180
L+ ML+SG P T SI+ AC+ LG++ +GR +H ++ K G + + +LI M
Sbjct: 323 LFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 382
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K I A+ VF + + ++SW +MI F+ G A F+ M +G +P++
Sbjct: 383 YAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGI-EPDDIT 441
Query: 241 FGSVFSACS-----NFARILFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEM 290
F + SACS + R +F + P L + +I EA + + M
Sbjct: 442 FVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTM 501
Query: 291 RDRELLPDGLTVHSLLCAC 309
E+ PDG+ SLL AC
Sbjct: 502 ---EMEPDGVIWCSLLKAC 517
>gi|347954544|gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
Length = 526
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 157/489 (32%), Positives = 266/489 (54%), Gaps = 34/489 (6%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F+ + + N++ W M G + + A+ LY+ M+ G++P +TF ++K+C+ +
Sbjct: 45 FETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAF 104
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+Q+H HV+K + L +LI+MY + R+ DAR VF + +DV S+ ++I +
Sbjct: 105 REGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGY 164
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
+ GY +E A+ LF+EI D+ SWNA+I+
Sbjct: 165 ASRGY-IEN------------------------------AQKLFDEIPVKDVVSWNAMIS 193
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A N EA+ LF +M + PD T+ +++ AC ++ G QVH +I GF S
Sbjct: 194 GYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGS 253
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N+ + NA++ +Y+KC + A +F+ L D +SWN++I N +E LF M
Sbjct: 254 NLKIVNALIDLYSKCGEVETACGLFEGLSYK-DVISWNTLIGGYTHMNLYKEALLLFQEM 312
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFDVFVMNGLMDIYIKCG 450
L S P+ +T ++ ACA + ++++ +H YI K G+ ++ L+D+Y KCG
Sbjct: 313 LRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCG 372
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ +A+++F+ M + SW+++I G+A G + A LF++MR G+ P+ +T VG+L+
Sbjct: 373 DIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLS 432
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSH G+++ G H++R M +Y I P EH C++DLL G EA++ I M + D
Sbjct: 433 ACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDG 492
Query: 571 VVWKSLLAS 579
V+W SLL +
Sbjct: 493 VIWCSLLKA 501
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 189/421 (44%), Gaps = 75/421 (17%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK- 95
T+ L+ +C+ ++ + G+++H H+L D+ + +++MY + G LEDAR FD+
Sbjct: 90 TFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQS 149
Query: 96 ------------------------------MPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+P ++VVSW AMI+G ++ +A++L+
Sbjct: 150 SHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 209
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M+++ V P + T +++ AC+ GS+ LGRQ+H + GS+L NALI +Y+K
Sbjct: 210 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 269
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A +F G++ KDV SW ++I ++ + EAL F EML G PN+ S+
Sbjct: 270 EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-SPNDVTMLSIL 328
Query: 246 SACSNF------------------------------------------ARILFNEIDSPD 263
AC++ A+ +F+ + +
Sbjct: 329 PACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRS 388
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV-H 322
L+SWNA+I G A H AN A LFS+MR + PD +T LL AC L G +
Sbjct: 389 LSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFR 448
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
S + ++ + C + A + + + D V W S++ AC HN
Sbjct: 449 SMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNV 508
Query: 383 E 383
E
Sbjct: 509 E 509
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 175/346 (50%), Gaps = 33/346 (9%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+A +F I P+L WN + G A S+ A+ L+ M LLP+ T LL +C
Sbjct: 40 YAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCA 99
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG--------- 361
+G Q+H +++K+G+D ++ V ++++MY + L +A VF +
Sbjct: 100 KSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTA 159
Query: 362 -----------KNA----------DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+NA D VSWN++I+ + +E LF M+ + ++PD
Sbjct: 160 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 219
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T V+ ACA+ S+E+ Q+H +I G ++ ++N L+D+Y KCG + +A LF
Sbjct: 220 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFE 279
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
+ DV+SW++LI GY EAL LF M G SPN VT++ +L AC+H+G ++
Sbjct: 280 GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIDI 339
Query: 521 G--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
G +H+Y I + G+ + ++D+ A+ G + A+ + M
Sbjct: 340 GRWIHVY-INKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM 384
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 160/321 (49%), Gaps = 21/321 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + Y EAL + TN+R ST ++SAC+ S++LGR+VH I
Sbjct: 189 NAMISGYAETGNYKEALELFK-DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWID 247
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ + N ++++Y KCG +E A F+ + ++V+SW +I G + +A+
Sbjct: 248 DHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALL 307
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG----SHLIAQNALI 178
L+ +ML+SG P T SI+ AC+ LG++ +GR +H ++ K G S L+ +LI
Sbjct: 308 LFQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLT--SLI 365
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
MY K I A+ VF + + ++SW +MI F+ G A F++M +G P++
Sbjct: 366 DMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGI-DPDD 424
Query: 239 FIFGSVFSACS-----NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLFS 288
F + SACS + R +F + +P L + +I + EA +
Sbjct: 425 ITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEM-- 482
Query: 289 EMRDRELLPDGLTVHSLLCAC 309
+R + PDG+ SLL AC
Sbjct: 483 -IRTMPMEPDGVIWCSLLKAC 502
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 135/292 (46%), Gaps = 37/292 (12%)
Query: 321 VHSYIIKMGF-DSNVPVCNAI--LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
+H+ +IK G ++N + I + L A+ VF+ + + + + WN++
Sbjct: 6 IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETI-QEPNLLIWNTMFRGHA 64
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
+ L+ M++ + P+ TF ++ +CAK + Q+H ++ K G D++
Sbjct: 65 LSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLY 124
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL---------------------- 475
V L+ +Y++ G L ARK+F+ + DVVS+++LI
Sbjct: 125 VHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKD 184
Query: 476 ---------GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
GYA+ G EAL+LF M V P+ T+V V++AC+ G +E G ++
Sbjct: 185 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH- 243
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +++G + + ++DL ++ G V A ++ D++ W +L+
Sbjct: 244 LWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSY-KDVISWNTLIG 294
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 188/605 (31%), Positives = 298/605 (49%), Gaps = 45/605 (7%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
EALVAY + + A ++S C +L G +V H+++S V + N +
Sbjct: 128 EALVAYR-RMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSL 186
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
+ M+G ++DA FD+M +R+ +SW AMI+ S + + M V P
Sbjct: 187 ITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDV 246
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG 196
T S++ C+ V LG +H+ + S + NAL+ MY+ ++ +A ++F
Sbjct: 247 TTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRN 306
Query: 197 IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------ 250
++R+DV SW +MI+++ + +EAL ++L PN F S ACS+
Sbjct: 307 MSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMN 366
Query: 251 ----FARIL------------------------------FNEIDSPDLASWNALIAGVAS 276
A IL F + D+ S N L G A+
Sbjct: 367 GRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAA 426
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSL--LCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+ AM +FS MR + P+ +T+ +L C +G L Y GM +H+Y+ + G S+
Sbjct: 427 LEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSY-GMPLHAYVTQTGLLSDE 485
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
+ N+++TMYA C L ++ +F + N +SWN+IIAA ++H + EE +LF
Sbjct: 486 YITNSLITMYATCGDLESSTGIFSRI-NNKSVISWNAIIAANVRHGRGEEAIKLFMDSQH 544
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
+ K D + + + A +ASLE QLH K GL D V+N MD+Y KCG +
Sbjct: 545 AGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDC 604
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
K + W++LI GYA++G EA F M S+G P+ VT V +L+ACSH
Sbjct: 605 MLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSH 664
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
GL+++G+ Y M +G+ P +HC C+VDLL R G EAE FI++M + ++W+
Sbjct: 665 AGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWR 724
Query: 575 SLLAS 579
SLL+S
Sbjct: 725 SLLSS 729
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/533 (27%), Positives = 250/533 (46%), Gaps = 49/533 (9%)
Query: 39 AGLISACSSLRSLQ----LGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
A L++AC R Q G +H + +V + +L++YG G + +A+ F
Sbjct: 45 ASLVTACEH-RGWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFW 103
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+MPQRNVVSWTA++ S N +A+ Y +M + GVM +++ C L
Sbjct: 104 EMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVA 163
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G Q+ AHV+ S +H+ N+LI M+ R+ DA +F + +D SW +MI+ +S
Sbjct: 164 GLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSH 223
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------- 249
+ ++M HG +P+ S+ S C+
Sbjct: 224 EEVYSKCFIVLSDM-RHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVP 282
Query: 250 ---------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE-MRDR 293
+ A LF + D+ SWN +I+ ++ EA+ + ++
Sbjct: 283 LINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTD 342
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
E P+ +T S L AC L G +H+ I++ + + + N++LTMY+KC+ + +
Sbjct: 343 EGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDT 402
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
VF+ + D VS N + R+FS M + IKP++IT ++ G C
Sbjct: 403 ERVFESM-PCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKS 461
Query: 414 MASLEMV-TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+ L LH Y+T+TGL D ++ N L+ +Y CG L S+ +F+ + N V+SW++
Sbjct: 462 LGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNA 521
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
+I + G G+EA+KLF + G + L L++ +++ +EEG+ L+
Sbjct: 522 IIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLH 574
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/532 (24%), Positives = 238/532 (44%), Gaps = 55/532 (10%)
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG---SV 152
MP R SW ++GC++ E+ A L M + V F S++ AC G
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G +HA ++ ++ AL+ +Y +L+A+ +F + +++V SW +++ A
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC------------------------ 248
S G EAL + M G N +V S C
Sbjct: 121 SSNGCMEEALVAYRRMRKEGV-MCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTH 179
Query: 249 -----------SNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
N R+ LF+ ++ D SWNA+I+ + ++ + S+MR
Sbjct: 180 VSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRH 239
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
E+ PD T+ SL+ C + G +HS + G +VP+ NA++ MY+ L
Sbjct: 240 GEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS-QIKPDHITFNDVMGAC 411
A +F+ + + D +SWN++I++ +Q N E ++L + + P+ +TF+ +GAC
Sbjct: 300 AESLFRNMSRR-DVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGAC 358
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ +L +H I + L + + N L+ +Y KC S+ ++F M DVVS +
Sbjct: 359 SSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCN 418
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
L GYA A+++F+ MR G+ PN +T++ + C +G LH Y + +
Sbjct: 419 VLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLG----DLHSYGMPLHA 474
Query: 532 Y----GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
Y G++ + ++ + A G + + +++ + ++ W +++A+
Sbjct: 475 YVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRIN-NKSVISWNAIIAA 525
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 185/582 (31%), Positives = 291/582 (50%), Gaps = 93/582 (15%)
Query: 59 DHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN------------------ 100
D I+ D+V+ N +++ Y + G+L AR+ FD+MP+RN
Sbjct: 76 DQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVE 135
Query: 101 -------------VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
VVSWTA I+G +N +A+KL+ ++L+SGV P TF S+++AC
Sbjct: 136 ESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACG 195
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
LG LG + V+K+ +L N+LI + + I AR VF + ++DV SW +
Sbjct: 196 ELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTA 255
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASW 267
++ A+ + G EA F+EM NEI SW
Sbjct: 256 ILDAYVETGDLREARRIFDEMPER-------------------------NEI------SW 284
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
+A+IA + A EA+ LFS+M P+ L A L G+ +H ++ K
Sbjct: 285 SAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTK 344
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKE-LGKNA---------------------- 364
+G D +V + ++++ +Y KC + LVF L KN
Sbjct: 345 IGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEEXEEL 404
Query: 365 -------DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+ SW +IJA L++ Q E++ +F+ +L S P+ TF+ V+ ACA +ASL
Sbjct: 405 FELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASL 464
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
+ +H I K G+ +D+FV L D+Y KCG +GS++++F M + +SW+ +I G
Sbjct: 465 DKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGL 524
Query: 478 AQFGCGDEALKLFTRM-RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
A+ G E+L LF M R+ V+PN + L+ VL ACSH GLV++GL + ME YGI P
Sbjct: 525 AESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKP 584
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+H +CVVDLL+R+G ++EAE+FI + + W +LL+
Sbjct: 585 KGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLS 626
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 122/520 (23%), Positives = 216/520 (41%), Gaps = 89/520 (17%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + L EAL + F + +R T+ ++ AC L LG + ++ +
Sbjct: 156 ISGFVRNGLNFEALKLF-FRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAG 214
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWT-------------------- 105
+ + + N ++ + + G ++ AR FD+M +R+VVSWT
Sbjct: 215 FEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFD 274
Query: 106 -----------AMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
AMIA SQ+ +A+KL+ +M+Q G P F + A + L ++
Sbjct: 275 EMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSA 334
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G +H HV K + ++LI +Y K + D R VF I K+V W SM+
Sbjct: 335 GINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVG---- 390
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGV 274
GY + E L + N+ SW +JAG
Sbjct: 391 -GYSINGRLEEXEELFELIPEKND--------------------------XSWGTIJAGY 423
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+ + + +F+ + P+ T S+LCAC +L +GM VH IIK+G ++
Sbjct: 424 LENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDI 483
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM-L 393
V A+ MYAKC + ++ VF+ + + + +SW +I + A E LF M
Sbjct: 484 FVGTALTDMYAKCGDIGSSKQVFERMPEK-NEISWTVMIQGLAESGFAVESLILFEEMER 542
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF-----DVFVMNG------- 441
S++ P+ + V+ AC+ HC + GL + V+ +
Sbjct: 543 TSEVAPNELMLLSVLFACS-----------HCGLVDKGLWYFNSMEKVYGIKPKGKHYTC 591
Query: 442 LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYAQF 480
++D+ + G L A + + P+ +W++L+ G ++
Sbjct: 592 VVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKY 631
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 138/326 (42%), Gaps = 71/326 (21%)
Query: 317 QGMQVHSYIIKMGFD-------------------------------SNVPVCNAILTMYA 345
QG +H+++IK GF S++ V N +++ Y
Sbjct: 39 QGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYV 98
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE---------------------- 383
+ L A L+F E+ + + VSW+++I+ +++ + E
Sbjct: 99 QWGNLVQARLLFDEMPER-NEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAIS 157
Query: 384 ---------ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
E +LF R+L S ++P+ +TF V+ AC ++ + + + K G
Sbjct: 158 GFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEH 217
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
+ V N L+ + ++ G + AR++F+ ME DVVSW++++ Y + G EA ++F M
Sbjct: 218 YLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMP 277
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCV 554
N ++ ++ S G EE L L+ M E G P +C + LA +
Sbjct: 278 ----ERNEISWSAMIARYSQSGYAEEALKLFSKMVQE-GFKPNISCFACTLSALASLRAL 332
Query: 555 HEAEDF---INQMACDADIVVWKSLL 577
+ + ++ D D+ + SL+
Sbjct: 333 SAGINIHGHVTKIGIDKDVFIGSSLI 358
>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 993
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 188/605 (31%), Positives = 298/605 (49%), Gaps = 45/605 (7%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
EALVAY + + A ++S C +L G +V H+++S V + N +
Sbjct: 128 EALVAYR-RMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSL 186
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
+ M+G ++DA FD+M +R+ +SW AMI+ S + + M V P
Sbjct: 187 ITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDV 246
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG 196
T S++ C+ V LG +H+ + S + NAL+ MY+ ++ +A ++F
Sbjct: 247 TTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRN 306
Query: 197 IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------ 250
++R+DV SW +MI+++ + +EAL ++L PN F S ACS+
Sbjct: 307 MSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMN 366
Query: 251 ----FARIL------------------------------FNEIDSPDLASWNALIAGVAS 276
A IL F + D+ S N L G A+
Sbjct: 367 GRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAA 426
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSL--LCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+ AM +FS MR + P+ +T+ +L C +G L Y GM +H+Y+ + G S+
Sbjct: 427 LEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSY-GMPLHAYVTQTGLLSDE 485
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
+ N+++TMYA C L ++ +F + N +SWN+IIAA ++H + EE +LF
Sbjct: 486 YITNSLITMYATCGDLESSTGIFSRI-NNKSVISWNAIIAANVRHGRGEEAIKLFMDSQH 544
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
+ K D + + + A +ASLE QLH K GL D V+N MD+Y KCG +
Sbjct: 545 AGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDC 604
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
K + W++LI GYA++G EA F M S+G P+ VT V +L+ACSH
Sbjct: 605 MLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSH 664
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
GL+++G+ Y M +G+ P +HC C+VDLL R G EAE FI++M + ++W+
Sbjct: 665 AGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWR 724
Query: 575 SLLAS 579
SLL+S
Sbjct: 725 SLLSS 729
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/533 (27%), Positives = 250/533 (46%), Gaps = 49/533 (9%)
Query: 39 AGLISACSSLRSLQ----LGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
A L++AC R Q G +H + +V + +L++YG G + +A+ F
Sbjct: 45 ASLVTACEH-RGWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFW 103
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+MPQRNVVSWTA++ S N +A+ Y +M + GVM +++ C L
Sbjct: 104 EMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVA 163
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G Q+ AHV+ S +H+ N+LI M+ R+ DA +F + +D SW +MI+ +S
Sbjct: 164 GLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSH 223
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------- 249
+ ++M HG +P+ S+ S C+
Sbjct: 224 EEVYSKCFIVLSDM-RHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVP 282
Query: 250 ---------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE-MRDR 293
+ A LF + D+ SWN +I+ ++ EA+ + ++
Sbjct: 283 LINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTD 342
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
E P+ +T S L AC L G +H+ I++ + + + N++LTMY+KC+ + +
Sbjct: 343 EGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDT 402
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
VF+ + D VS N + R+FS M + IKP++IT ++ G C
Sbjct: 403 ERVFESM-PCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKS 461
Query: 414 MASLEMV-TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+ L LH Y+T+TGL D ++ N L+ +Y CG L S+ +F+ + N V+SW++
Sbjct: 462 LGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNA 521
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
+I + G G+EA+KLF + G + L L++ +++ +EEG+ L+
Sbjct: 522 IIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLH 574
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/532 (24%), Positives = 238/532 (44%), Gaps = 55/532 (10%)
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG---SV 152
MP R SW ++GC++ E+ A L M + V F S++ AC G
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G +HA ++ ++ AL+ +Y +L+A+ +F + +++V SW +++ A
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC------------------------ 248
S G EAL + M G N +V S C
Sbjct: 121 SSNGCMEEALVAYRRMRKEGV-MCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTH 179
Query: 249 -----------SNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
N R+ LF+ ++ D SWNA+I+ + ++ + S+MR
Sbjct: 180 VSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRH 239
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
E+ PD T+ SL+ C + G +HS + G +VP+ NA++ MY+ L
Sbjct: 240 GEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS-QIKPDHITFNDVMGAC 411
A +F+ + + D +SWN++I++ +Q N E ++L + + P+ +TF+ +GAC
Sbjct: 300 AESLFRNMSRR-DVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGAC 358
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ +L +H I + L + + N L+ +Y KC S+ ++F M DVVS +
Sbjct: 359 SSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCN 418
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
L GYA A+++F+ MR G+ PN +T++ + C +G LH Y + +
Sbjct: 419 VLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLG----DLHSYGMPLHA 474
Query: 532 Y----GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
Y G++ + ++ + A G + + +++ + ++ W +++A+
Sbjct: 475 YVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRIN-NKSVISWNAIIAA 525
>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 817
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 182/635 (28%), Positives = 312/635 (49%), Gaps = 59/635 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAY-DFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
N + L N +EAL+ Y + ++ ++ TY+ ++ AC+ R+L +G+ VH H
Sbjct: 63 NTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHF 122
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSL-EDARMG------------FDKMPQRNVVSWTAMI 108
L P ++ N +LNMY C S D +M FD M +R VV+W +I
Sbjct: 123 LRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLI 182
Query: 109 AGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK--SE 166
A + + +A+K + M++ G+ P +F ++ A S LG +H ++K SE
Sbjct: 183 AWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSE 242
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
+ + L ++ I MY + + A+ VF ++ W +MI+AF + + LE + F
Sbjct: 243 YVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFF 302
Query: 227 EMLHHGAYQPNEFIFGSVFSACSNFARI-------------------------------- 254
+ + +E S SA S+ +
Sbjct: 303 QAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRC 362
Query: 255 --------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
+F+ + D+ SWN +I+ + +EA+ LF EM+ ++L+ D +TV +LL
Sbjct: 363 NSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALL 422
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF-KELGKNAD 365
A G Q H Y+++ G + + ++ MYAK ++ A VF K D
Sbjct: 423 SAASDLRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQNVFEKSFSHERD 481
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
+WNS+++ Q+ ++ F + +ML ++ P+ +T ++ AC ++ QLH
Sbjct: 482 QATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHG 541
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
+ + L +VFV L+D+Y K GS+ A +F+ +V++S++ILGY Q G G+
Sbjct: 542 FSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGES 601
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
AL +F RM+ G+ P+ VTLV VL+ACS+ GLV+EGL ++ M Y I P+ EH CV
Sbjct: 602 ALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVA 661
Query: 546 DLLARAGCVHEAEDFINQMACDADIV-VWKSLLAS 579
D+L RAG V +A +F+ + +++ +W SLLA+
Sbjct: 662 DMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAA 696
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 137/572 (23%), Positives = 267/572 (46%), Gaps = 69/572 (12%)
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
P + + L+ + G L AR FD +P+ + V W +I G N ++A+ Y M
Sbjct: 26 PKIPTIRYRLSRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNM 85
Query: 128 LQSG--VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY---- 181
S V +T+ S++KAC+ ++ +G+ +HAH ++ I N+L+ MY
Sbjct: 86 KSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCS 145
Query: 182 ---------TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
+ + R R VF + ++ V +W ++IA + + EA+ F+ M+ G
Sbjct: 146 STTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIG 205
Query: 233 AYQPNEFIFGSVFSA------------------------------------------CSN 250
+P+ F +VF A C
Sbjct: 206 I-KPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLE 264
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP-DGLTVHSLLCAC 309
FA+ +F+ + WN +I+ ++ + E + LF + + E D +T+ S + A
Sbjct: 265 FAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAA 324
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSW 369
Q+H+++IK + V V NA++ MY++C+ + + +F + + D VSW
Sbjct: 325 SHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEK-DVVSW 383
Query: 370 NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
N++I+A +Q+ +E LF M + D +T ++ A + + + ++ Q H Y+ +
Sbjct: 384 NTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLR 443
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLF--NFMENPDVVSWSSLILGYAQFGCGDEAL 487
G+ F+ + + L+D+Y K G + +A+ +F +F D +W+S++ GY Q G D+A
Sbjct: 444 NGIQFE-GMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAF 502
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVV 545
+ +M V PN+VTL +L AC+ G ++ G LH + I + + + ++
Sbjct: 503 LILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRND---LDQNVFVATALI 559
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
D+ +++G + AE+ ++ A + IV + +++
Sbjct: 560 DMYSKSGSIAHAENVFSK-ANEKSIVTYSTMI 590
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 168/351 (47%), Gaps = 27/351 (7%)
Query: 250 NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR--ELLPDGLTVHSLLC 307
+ AR LF+ + P WN +I G+ ++ +EA+ +S M+ ++ D T S+L
Sbjct: 45 HLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLK 104
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL------------CNALL 355
AC L G VH++ ++ + + V N++L MY+ CS C+ +
Sbjct: 105 ACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVR 164
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+ + V+WN++IA ++ + E + FS M+ IKP ++F +V A + +
Sbjct: 165 KVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLG 224
Query: 416 SLEMVTQLHCYITKTGLAF--DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ +H + K G + D++V++ + +Y + G L A+K+F+ + W+++
Sbjct: 225 DFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTM 284
Query: 474 ILGYAQFGCGDEALKLFTR-MRSLGVSPNLVTLVGVLTACSHVGLVE--EGLHLYRIMEN 530
I + Q E ++LF + + S + + VTL+ ++A SH+ E E LH + I
Sbjct: 285 ISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKN- 343
Query: 531 EYGIIPTREHC--SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + C + ++ + +R + + + M + D+V W +++++
Sbjct: 344 ----VAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMP-EKDVVSWNTMISA 389
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 25/148 (16%)
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL----VTL 505
G L AR+LF+ + P V W+++I+G DEAL ++ M+S SP + T
Sbjct: 42 GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKS--SSPQVKCDSYTY 99
Query: 506 VGVLTACSHVG--LVEEGLH-------------LYRIMENEYGIIPTREHCSCVVDLLAR 550
VL AC+ +V + +H +Y + N Y + + +V +R
Sbjct: 100 SSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSR 159
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLA 578
V + D + + +V W +L+A
Sbjct: 160 CDLVRKVFDTMRKRT----VVAWNTLIA 183
>gi|255578455|ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530403|gb|EEF32291.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 718
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 178/610 (29%), Positives = 294/610 (48%), Gaps = 73/610 (11%)
Query: 29 TNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
+N + S YA L CSS S+ RK+ H++ P + L N + YGKC L+D
Sbjct: 51 SNSSVPYSLYASLFQLCSSTLSIVEARKIESHLITFNPTPPIFLLNRAIETYGKCECLKD 110
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
AR FD+MPQR+ SW A+I +Q A+ L+ M + GV + TF S++K+CS
Sbjct: 111 ARELFDEMPQRDGGSWNAIIKAYTQCGYAEKALGLFKDMNKEGVFANEITFASVLKSCSD 170
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+ + L RQ+H ++K ++I +AL+ +Y K + +AR +F+ I + +W +
Sbjct: 171 VLDLSLSRQIHGLIVKCGFCGNVILGSALVDVYGKCKVMSEARLMFNEIENCNDVTWNVI 230
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------- 251
+ + +G E EA+ F +M +P F F + ACS
Sbjct: 231 VRRYLDVGNEREAVKMFFKMFQTDV-RPLNFTFSNALIACSAMRALNEGMQIHAFAIKIK 289
Query: 252 -----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
AR++F++ S D+ SW ++++ A EA LF
Sbjct: 290 FEEDEAVSSSLSNMYAKCGKLESARMIFDQHGSRDVISWTSMVSAYALSGRTREARELFE 349
Query: 289 EMRDRELLP-------------------------------DGLTVHSLLCACIGRLTLYQ 317
+M + ++ D +T+ LL C G +
Sbjct: 350 KMPEWSVVSWNAMLAGYIRSLQWEEALDFVCLMRRTTEDIDHITLGLLLNVCAGISDVEM 409
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G Q H +I + GF S + V NA+L MY KC L +A + F ++ ++ D++SWN+++ +
Sbjct: 410 GKQAHGFIYRHGFSSCILVGNALLDMYGKCGNLRSARVWFYQMSQSRDNISWNALLTSYA 469
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
+H+Q+E+ +F M + KP TF ++ ACA + +L+ ++H ++ + G D
Sbjct: 470 RHHQSEQAMMIFGEM-QWETKPSTFTFGTLLAACANIFALDQGKEIHGFMIRNGYNLDTV 528
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
+ L+D+Y KC L A +FN + DV+ W+S+ILG G G E LKLF +M G
Sbjct: 529 ISGALVDMYSKCRCLSYALTVFNRAGSRDVILWNSIILGCCHNGRGKEVLKLFGQMEKEG 588
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
V P+ VT GVL AC + G V+ + + M ++ +IP EH C+++L +R C+
Sbjct: 589 VKPDHVTFHGVLLACMYEGHVKLAVEYFNSMSDKCCVIPRLEHYECMIELFSRYRCMSRL 648
Query: 558 EDFINQMACD 567
E+F+ M D
Sbjct: 649 ENFVKGMPFD 658
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 173/369 (46%), Gaps = 45/369 (12%)
Query: 248 CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC 307
C AR LF+E+ D SWNA+I A +A+ LF +M + + +T S+L
Sbjct: 107 CLKDARELFDEMPQRDGGSWNAIIKAYTQCGYAEKALGLFKDMNKEGVFANEITFASVLK 166
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
+C L L Q+H I+K GF NV + +A++ +Y KC V+ A L+F E+ +N + V
Sbjct: 167 SCSDVLDLSLSRQIHGLIVKCGFCGNVILGSALVDVYGKCKVMSEARLMFNEI-ENCNDV 225
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
+WN I+ L E ++F +M + ++P + TF++ + AC+ M +L Q+H +
Sbjct: 226 TWNVIVRRYLDVGNEREAVKMFFKMFQTDVRPLNFTFSNALIACSAMRALNEGMQIHAFA 285
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN--------------------------- 460
K D V + L ++Y KCG L SAR +F+
Sbjct: 286 IKIKFEEDEAVSSSLSNMYAKCGKLESARMIFDQHGSRDVISWTSMVSAYALSGRTREAR 345
Query: 461 --FMENPD--VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
F + P+ VVSW++++ GY + +EAL MR + +TL +L C+ +
Sbjct: 346 ELFEKMPEWSVVSWNAMLAGYIRSLQWEEALDFVCLMRRTTEDIDHITLGLLLNVCAGIS 405
Query: 517 LVEEGLHLYRIMENEYGIIPTREHCSCV------VDLLARAGCVHEAEDFINQMACDADI 570
VE G + +G I SC+ +D+ + G + A + QM+ D
Sbjct: 406 DVEMG-------KQAHGFIYRHGFSSCILVGNALLDMYGKCGNLRSARVWFYQMSQSRDN 458
Query: 571 VVWKSLLAS 579
+ W +LL S
Sbjct: 459 ISWNALLTS 467
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 11/280 (3%)
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
SL C L++ + ++ S++I + + N + Y KC L +A +F E+ +
Sbjct: 62 SLFQLCSSTLSIVEARKIESHLITFNPTPPIFLLNRAIETYGKCECLKDARELFDEMPQR 121
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
D SWN+II A Q AE+ LF M + + ITF V+ +C+ + L + Q+
Sbjct: 122 -DGGSWNAIIKAYTQCGYAEKALGLFKDMNKEGVFANEITFASVLKSCSDVLDLSLSRQI 180
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H I K G +V + + L+D+Y KC + AR +FN +EN + V+W+ ++ Y G
Sbjct: 181 HGLIVKCGFCGNVILGSALVDVYGKCKVMSEARLMFNEIENCNDVTWNVIVRRYLDVGNE 240
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY----RIMENEYGIIPTRE 539
EA+K+F +M V P T L ACS + + EG+ ++ +I E +
Sbjct: 241 REAVKMFFKMFQTDVRPLNFTFSNALIACSAMRALNEGMQIHAFAIKIKFEEDEAVS--- 297
Query: 540 HCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
S + ++ A+ G + A +Q D++ W S++++
Sbjct: 298 --SSLSNMYAKCGKLESARMIFDQHG-SRDVISWTSMVSA 334
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 186/588 (31%), Positives = 299/588 (50%), Gaps = 45/588 (7%)
Query: 34 RPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+P+ Y A ++ AC+ L ++H ++ DV + +++ Y K ++DAR+
Sbjct: 138 KPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARL 197
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD + + +WT +IAG S+ + ++KL+ QM + V P ++ S++ AC L
Sbjct: 198 LFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKF 257
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ G+Q+H +V++S + N I Y K ++ R +F + K+V SW ++IA
Sbjct: 258 LEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAG 317
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
+ + +AL F EM G + P+ F SV ++C +
Sbjct: 318 CMQNSFHRDALDLFVEMARMG-WNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDN 376
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
AR +FN + + DL S+NA+I G + EA+ LF EMR
Sbjct: 377 DDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMR 436
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
P L SLL L Q+H IIK G + +A++ +Y+KCS +
Sbjct: 437 LSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVG 496
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A LVF+E+ ++ D V W ++ + Q ++ EE +L+ + S++KP+ TF V+ A
Sbjct: 497 DARLVFEEI-QDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAA 555
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ +ASL Q H + K G D FV N L+D+Y K GS+ A K F D W+
Sbjct: 556 SNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWN 615
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
S+I YAQ G ++AL++F M G+ PN VT VGVL+ACSH GL++ G + M ++
Sbjct: 616 SMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSM-SQ 674
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+GI P EH C+V LL RAG ++EA++FI +M VVW+SLL++
Sbjct: 675 FGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSA 722
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 161/569 (28%), Positives = 280/569 (49%), Gaps = 50/569 (8%)
Query: 55 RKVHDHILLSKCQP-DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ 113
+K+H I++ D+ L N +L+ Y K + A FD M +N+V+W++M++ +
Sbjct: 58 KKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTH 117
Query: 114 NYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
+ +A+ L++Q ++S P ++ S+++AC+ G + Q+H V+K + +
Sbjct: 118 HSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVY 177
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
+LI YTK I DAR +F G+ K +W ++IA +SK G +L F++M G
Sbjct: 178 VCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQM-KEG 236
Query: 233 AYQPNEFIFGSVFSAC----------------------------------------SNFA 252
P++++ SV SAC
Sbjct: 237 HVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLG 296
Query: 253 RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
R LF+ + ++ SW +IAG +S +A+ LF EM PD S+L +C
Sbjct: 297 RKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSL 356
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
+ L +G QVH+Y IK+ D++ V N ++ MYAKC L +A VF L D VS+N++
Sbjct: 357 VALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVF-NLMAAIDLVSYNAM 415
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
I + ++ E LF M S P + F ++G A + LE+ Q+H I K G+
Sbjct: 416 IEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGV 475
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
+ D F + L+D+Y KC +G AR +F +++ D+V W+++ GY Q +E+LKL+
Sbjct: 476 SLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKC 535
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARA 551
++ + PN T V+TA S++ + G + ++++ + P + +VD+ A++
Sbjct: 536 LQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFV--ANTLVDMYAKS 593
Query: 552 GCVHEAED-FINQMACDADIVVWKSLLAS 579
G + EA FI+ D W S++A+
Sbjct: 594 GSIEEAHKAFISTNW--KDTACWNSMIAT 620
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 175/378 (46%), Gaps = 41/378 (10%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
++++C SL +L+ GR+VH + + D ++N +++MY KC SL DAR F+ M
Sbjct: 347 TSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAA 406
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
++VS+ AMI G S+ + +A+ L+ +M S P F S++ + L + L Q+
Sbjct: 407 IDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQI 466
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H +IK A +ALI +Y+K R+ DAR VF I KD+ W +M + +++
Sbjct: 467 HGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSEN 526
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEI------DSP----- 262
E+L + L +PNEF F +V +A SN A + N++ D P
Sbjct: 527 EESL-KLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANT 585
Query: 263 ------------------------DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
D A WN++IA A H A +A+ +F +M L P+
Sbjct: 586 LVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPN 645
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+T +L AC L G + + G + + ++++ + L A +
Sbjct: 646 YVTFVGVLSACSHTGLLDLGFDHFDSMSQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIE 705
Query: 359 ELGKNADSVSWNSIIAAC 376
++ +V W S+++AC
Sbjct: 706 KMPIKQAAVVWRSLLSAC 723
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 13/281 (4%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+ L+ +SL L+L ++H I+ D + ++++Y KC + DAR+ F+++
Sbjct: 447 FVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQ 506
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+++V WTAM +G +Q + +++KLY + S + P +FTF ++I A S + S+ G+Q
Sbjct: 507 DKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQ 566
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
H VIK N L+ MY K I +A F KD W SMIA +++ G
Sbjct: 567 FHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGE 626
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN--FARILFNEIDS-------PDLASWN 268
+AL F +M+ G +PN F V SACS+ + F+ DS P + +
Sbjct: 627 AEKALQVFEDMIMEG-LKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQFGIEPGIEHYV 685
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+++ + EA +M ++ + SLL AC
Sbjct: 686 CMVSLLGRAGKLYEAKEFIEKMPIKQA---AVVWRSLLSAC 723
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 169/573 (29%), Positives = 294/573 (51%), Gaps = 44/573 (7%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
+ S L+ C++ +SL+ + VH IL + DVVL ++N+Y C AR+
Sbjct: 1 MESSKLLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLV 60
Query: 93 FDKMPQR-NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV-MPGQFTFGSIIKACSGLG 150
F+ + R +V W ++++G S+N +D +K++ ++L + +P FT+ ++IKA LG
Sbjct: 61 FENIDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALG 120
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
LGR +H V+KS H ++ ++L+ MY KF+ D+ VF + +DV SW ++I+
Sbjct: 121 REFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVIS 180
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------- 251
+F + G +AL F M ++PN SACS
Sbjct: 181 SFYQRGDAEKALELFGRM-ERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFE 239
Query: 252 ---------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
AR +F ++ L +WN++I G + ++ + L + M
Sbjct: 240 LDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRM 299
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
P T+ S+L AC L G VH Y+I+ D+++ + +++ +Y KC +
Sbjct: 300 IIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEV 359
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
A VF + K+ SWN +I+ + + ++ +M++ ++PD +TF V+
Sbjct: 360 KLAETVFLKTQKDVVE-SWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLST 418
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
C+++A+LE Q+H I+++ L D +++ L+D+Y KCG++ A ++FN + DVVSW
Sbjct: 419 CSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSW 478
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
+ +I Y G EAL F M+ GV P+ VT + VL+AC H GL++EG+ + M +
Sbjct: 479 TVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQMRS 538
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
+YGI + E SC++D+L RAG + EA + Q
Sbjct: 539 KYGIEASIEQYSCLIDILGRAGRLLEAYGILQQ 571
>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Cucumis sativus]
Length = 704
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 282/556 (50%), Gaps = 49/556 (8%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG---CSQNYQENDAIKLYI 125
DV N+ILN Y KC L A + FD+MP R+ VSW MIAG C D ++
Sbjct: 32 DVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRC-- 89
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M G ++TFGS++K + G LG+Q+H+ +IK + ++ A +AL+ MY K +
Sbjct: 90 -MRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCE 148
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLG------YELEALCHFNEMLHHGAYQP--- 236
++ DA F I++ + SW +MI +++ G + L+ + E + G Y P
Sbjct: 149 KLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLP 208
Query: 237 ----------NEFIFGSV------------------FSACSNF---ARILFNEIDSPDLA 265
+ G + +S C + RI + DL
Sbjct: 209 LLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLV 268
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
+WN+L+A S + A L +M++ PD + S++ AC G +H +
Sbjct: 269 TWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLV 328
Query: 326 IKMGFDSNVPVCNAILTMYAKCSV--LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
IK GF+ +VP+ NA+++MY K + AL +F+ L + D VSWNSI+ Q +E
Sbjct: 329 IKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESL-EFKDRVSWNSILTGLSQTGSSE 387
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
+ + F M ++ + DH +F+ V+ +C+ +A+ ++ Q+H K GL + FV + L+
Sbjct: 388 DAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLI 447
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
+Y KCG + AR+ F ++W++L+ GYAQ G + AL LF M V + +
Sbjct: 448 FMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEEKKVKMDHI 507
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
T V VLTACSH+GLVE+G R ME++YG+ P EH +C VDL R+G + EA+ I +
Sbjct: 508 TFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEE 567
Query: 564 MACDADIVVWKSLLAS 579
M D VWK+ L +
Sbjct: 568 MPFKPDTTVWKTFLGA 583
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 220/485 (45%), Gaps = 51/485 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ + LG++VH I+ +V + +L+MY KC LEDA + F +
Sbjct: 101 TFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSI 160
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ N VSW AMI G +Q A L M Q G T+ ++ L
Sbjct: 161 SKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTS 220
Query: 157 QLHAHVIKSEHGSHLIAQ--NALIAMYTKFDRILDARNVF-SGIARKDVTSWGSMIAAFS 213
QLH +IK HG L+ NALI Y+K + DA+ +F S +D+ +W S++AA+
Sbjct: 221 QLHGKIIK--HGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYL 278
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-----SNFARIL------------- 255
E A +M HG ++P+ + + S+ SAC SN R L
Sbjct: 279 LRSQEDLAFKLLIDMQEHG-FEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSV 337
Query: 256 ------------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
F ++ D SWN+++ G++ ++ +A+ F MR
Sbjct: 338 PISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMR 397
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ D + ++L +C T G Q+H +K G +SN V ++++ MY+KC ++
Sbjct: 398 SAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIE 457
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A F+E KN+ S++WN+++ QH Q LF M ++K DHITF V+ AC
Sbjct: 458 DARRSFEEASKNS-SITWNALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTAC 516
Query: 412 AKMASLEMVTQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVS 469
+ + +E + L C + G+ + +D+Y + G L A+ L M PD
Sbjct: 517 SHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTV 576
Query: 470 WSSLI 474
W + +
Sbjct: 577 WKTFL 581
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 166/394 (42%), Gaps = 55/394 (13%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
++ TYA L+ L ++H I+ + + N ++ Y KCGSL+DA+
Sbjct: 197 KVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKR 256
Query: 92 GFDKMPQ-RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD R++V+W +++A QE+ A KL I M + G P +++ SII AC
Sbjct: 257 IFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNEN 316
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD--RILDARNVFSGIARKDVTSWGSM 208
GR LH VIK + NALI+MY K D + +A +F + KD SW S+
Sbjct: 317 ISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSI 376
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------- 251
+ S+ G +A+ F M A + + F +V +CS+
Sbjct: 377 LTGLSQTGSSEDAVKSFLHM-RSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYG 435
Query: 252 -----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
AR F E +WNAL+ G A H N A+ LF
Sbjct: 436 LESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFF 495
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP------VCNAILT 342
M ++++ D +T ++L AC + QG + ++ M D VP C +
Sbjct: 496 LMEEKKVKMDHITFVAVLTACSHIGLVEQGCK---FLRCMESDYGVPPRMEHYAC--AVD 550
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+Y + L A + +E+ D+ W + + AC
Sbjct: 551 LYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGAC 584
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 125/269 (46%), Gaps = 24/269 (8%)
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
HS +K+G ++V CN IL Y KC L +A ++F E+ DSVSWN++IA +
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMR-DSVSWNTMIAGHINCGN 79
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
E + + M + + D TF ++ A + Q+H I K G A +V+ +
Sbjct: 80 LEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSA 139
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG---- 497
L+D+Y KC L A F + + VSW+++I GYAQ G + A L M G
Sbjct: 140 LLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVD 199
Query: 498 ---VSPNLVTLVGV----LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
+P L L LT+ H +++ GL L M C+ ++ ++
Sbjct: 200 DGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTM------------CNALITSYSK 247
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
G + +A+ + A D+V W SLLA+
Sbjct: 248 CGSLDDAKRIFDSSAGIRDLVTWNSLLAA 276
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 144/304 (47%), Gaps = 16/304 (5%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC--GSLEDARMGFD 94
+Y +ISAC + GR +H ++ + V + N +++MY K GS+++A F+
Sbjct: 304 SYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFE 363
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+ ++ VSW +++ G SQ DA+K ++ M + + ++F +++++CS L + L
Sbjct: 364 SLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQL 423
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+Q+H +K S+ ++LI MY+K I DAR F ++ +W +++ +++
Sbjct: 424 GQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQ 483
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNEIDSPDLA 265
G AL F ++ + + F +V +ACS+ F R + ++ P
Sbjct: 484 HGQCNVALDLFF-LMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRM 542
Query: 266 SWNALIAGVASHSNA-NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
A + S EA +L EM + PD + L AC + QV +
Sbjct: 543 EHYACAVDLYGRSGRLEEAKALIEEMPFK---PDTTVWKTFLGACRSCGNIELACQVAGH 599
Query: 325 IIKM 328
+++M
Sbjct: 600 LLEM 603
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 176/534 (32%), Positives = 271/534 (50%), Gaps = 42/534 (7%)
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
+E A F MP++N VSW A++ G +Q +KL+ +M + +FT +++K
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
C+ GS+ G+ LHA ++S +L+ MY+K + DA VF+ I DV +W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------- 254
+MI + G+ EA F+ M GA +PN+F S+ S +N +
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGA-RPNQFTLSSLVSTATNMGDLRYGQSIHGCIC 179
Query: 255 -----------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMS 285
+F + +PDL SWNAL++G
Sbjct: 180 KYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPR 239
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
+F +M P+ T S+L +C L G QVH++IIK D + V A++ MYA
Sbjct: 240 IFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYA 299
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
K L +A + F L N D SW II+ Q +QAE+ + F +M IKP+ T
Sbjct: 300 KARCLEDAGVAFDRL-VNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLA 358
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
+ C+ MA+LE QLH K G D+FV + L+D+Y KCG + A +F + +
Sbjct: 359 SCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISR 418
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
D+VSW+++I GY+Q G G++AL+ F M S G+ P+ T +GVL+ACS +GLVEEG +
Sbjct: 419 DIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRF 478
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M YGI P+ EH +C+VD+L RAG +E + FI +M ++W+++L +
Sbjct: 479 DSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGA 532
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 201/422 (47%), Gaps = 42/422 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T + ++ C++ SL+ G+ +H L S C+ D L +++MY KCG++ DA F K+
Sbjct: 53 TLSTVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKI 112
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+VV+W+AMI G Q +A +L+ M + G P QFT S++ + +G + G+
Sbjct: 113 RNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQ 172
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H + K S + N LI MY K + D VF + D+ SW ++++ F
Sbjct: 173 SIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQ 232
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
F +ML G ++PN F F SV +CS+
Sbjct: 233 TCGRGPRIFYQMLLEG-FKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVG 291
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A + F+ + + D+ SW +I+G A A +A+ F +M+ +
Sbjct: 292 TALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIK 351
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P+ T+ S L C TL G Q+H+ +K G ++ V +A++ +Y KC + +A +
Sbjct: 352 PNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAI 411
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
FK L + D VSWN+II+ QH Q E+ F ML+ I PD TF V+ AC+ M
Sbjct: 412 FKGL-ISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGL 470
Query: 417 LE 418
+E
Sbjct: 471 VE 472
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 145/283 (51%), Gaps = 14/283 (4%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ +CSSL + G++VH HI+ + D + +++MY K LEDA + FD++
Sbjct: 255 TFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRL 314
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R++ SWT +I+G +Q Q A+K + QM + G+ P ++T S + CS + ++ GR
Sbjct: 315 VNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGR 374
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
QLHA +K+ H + +AL+ +Y K + A +F G+ +D+ SW ++I+ +S+ G
Sbjct: 375 QLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHG 434
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFNEID-----SPDLAS 266
+AL F ML G P+E F V SACS + F+ + +P +
Sbjct: 435 QGEKALEAFRMMLSEGI-MPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEH 493
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+ ++ + NE EM L P L ++L AC
Sbjct: 494 YACMVDILGRAGKFNEVKIFIEEM---NLTPYSLIWETVLGAC 533
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 83/157 (52%)
Query: 1 FSNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDH 60
FS + S Q E V Y I+ T A +S CS + +L+ GR++H
Sbjct: 320 FSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAV 379
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ + D+ + + ++++YGKCG +E A F + R++VSW +I+G SQ+ Q A
Sbjct: 380 AVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKA 439
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
++ + ML G+MP + TF ++ ACS +G V G++
Sbjct: 440 LEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKK 476
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 278/547 (50%), Gaps = 47/547 (8%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGV 132
N +L K G L +AR FDKM QR+ +SWT +I+G +A+ L+ +M ++ G+
Sbjct: 5 NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
F +KAC SV G LH + +K++ + + +AL+ MY K ++ +
Sbjct: 65 HMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--- 249
VF + ++V SW ++IA + GY EAL +F++M + + F S AC+
Sbjct: 125 VFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKV-GCDTYTFSSALKACADSG 183
Query: 250 --NFAR-----------------------------------ILFNEIDSPDLASWNALIA 272
N+ R LF + D+ SW +I
Sbjct: 184 ALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIM 243
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL--CACIGRLTLYQGMQVHSYIIKMGF 330
A+ F MR+ ++ P+ T +++ CA +GR+ G Q+H+++I+ G
Sbjct: 244 SNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEW--GEQLHAHVIRRGL 301
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
++ V N+I+ MY+KC L A VF+ L + D +SW+++I+ Q EE F S
Sbjct: 302 VDSLSVANSIMAMYSKCWQLDLASTVFQGLSRR-DIISWSTMISGYAQGGCGEEAFDYLS 360
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
M +P+ F V+ C MA LE QLH ++ GL + V + L+++Y KCG
Sbjct: 361 WMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCG 420
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
S+ A K+F+ E ++VSW+++I GYA+ G EA+ LF ++ +G+ P+ VT + VL
Sbjct: 421 SIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLA 480
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSH GLV+ G H + + + I P+++H C++DLL RAG +++AE I M D
Sbjct: 481 ACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDD 540
Query: 571 VVWKSLL 577
VVW +LL
Sbjct: 541 VVWSTLL 547
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 154/617 (24%), Positives = 266/617 (43%), Gaps = 79/617 (12%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
EAL + + + P + + AC S+ G +H + + + V + +
Sbjct: 49 TEALSLFSKMWVEPGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSA 108
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
+++MY K G +++ + F +MP RNVVSWTA+IAG + +A+ + M V
Sbjct: 109 LVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCD 168
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
+TF S +KAC+ G++ GR++H +K + N L MY K ++ +F
Sbjct: 169 TYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFE 228
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL 255
+ ++DV SW ++I + ++G E A+ F M PNEF F +V S C+ RI
Sbjct: 229 SMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRM-RETDVSPNEFTFAAVISGCATLGRIE 287
Query: 256 FNE-----------IDS-----------------------------PDLASWNALIAGVA 275
+ E +DS D+ SW+ +I+G A
Sbjct: 288 WGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYA 347
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
EA S MR P+ S+L C L QG Q+H++++ +G + N
Sbjct: 348 QGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTM 407
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
V +A++ MY+KC + A +F E N + VSW ++I +H ++E LF ++
Sbjct: 408 VQSALINMYSKCGSIKEASKIFDEAEYN-NIVSWTAMINGYAEHGYSQEAIDLFKKLPKV 466
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM-DIYIKCGSLGS 454
++PD +TF V+ AC+ +++ ++K G M D+ + G L
Sbjct: 467 GLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLND 526
Query: 455 ARKLFNFME-NPDVVSWSSLILG---YAQFGCGDEALKLFTRMRSLGVSPN-LVTLVGVL 509
A + M D V WS+L+ + CG A + + L + PN VT + +
Sbjct: 527 AESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAE-----KILQLDPNCAVTHITLA 581
Query: 510 TACSHVGLVEEGLHLYRIMENEYGII------------------------PTREHCSCVV 545
+ G +E + ++M+++ G++ P E+ V+
Sbjct: 582 NMYAAKGKWKEAAEVRKMMKSK-GVVKEPGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVL 640
Query: 546 DLLARAGCVHEAE-DFI 561
DLLA +H E DF+
Sbjct: 641 DLLASQAEMHMQEMDFL 657
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 215/465 (46%), Gaps = 70/465 (15%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
YN+ +AY + T++ + AC+ +L GR++H L + N
Sbjct: 149 YNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVAN 208
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
+ MY KCG L+ F+ M QR+VVSWT +I Q QE +A+K + +M ++ V P
Sbjct: 209 TLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSP 268
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
+FTF ++I C+ LG + G QLHAHVI+ L N+++AMY+K ++ A VF
Sbjct: 269 NEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVF 328
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
G++R+D+ SW +MI+ +++ G EA + + M G +PNEF F SV S C N A +
Sbjct: 329 QGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGP-RPNEFAFASVLSVCGNMAIL 387
Query: 255 ----------------------------------------LFNEIDSPDLASWNALIAGV 274
+F+E + ++ SW A+I G
Sbjct: 388 EQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGY 447
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD--- 331
A H + EA+ LF ++ L PD +T ++L AC H+ ++ +GF
Sbjct: 448 AEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAAC-----------SHAGLVDLGFHYFN 496
Query: 332 --SNV-PVCNA------ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
S V +C + ++ + + L +A + + + D V W++++ AC H
Sbjct: 497 SLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDV 556
Query: 383 EELFRLFSRMLASQIKPD----HITFNDVMGACAKMASLEMVTQL 423
+ R ++L Q+ P+ HIT ++ A K V ++
Sbjct: 557 DCGKRAAEKIL--QLDPNCAVTHITLANMYAAKGKWKEAAEVRKM 599
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM---RS 495
+N ++ +K G L +AR+LF+ M D +SW+++I GY EAL LF++M
Sbjct: 4 INLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPG 63
Query: 496 LGVSPNLVTLVGVLTACSHVGLVE--EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
L + P +++L L AC V E LH Y + + + + S +VD+ + G
Sbjct: 64 LHMDPFILSL--ALKACGLNMSVSFGESLHGYSVKTD---FVNSVFVGSALVDMYMKIGK 118
Query: 554 VHEAEDFINQMACDADIVVWKSLLA 578
V E +M ++V W +++A
Sbjct: 119 VDEGCIVFKEMPL-RNVVSWTAIIA 142
>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g25970-like [Cucumis
sativus]
Length = 704
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 282/556 (50%), Gaps = 49/556 (8%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG---CSQNYQENDAIKLYI 125
DV N+ILN Y KC L A + FD+MP R+ VSW MIAG C D ++
Sbjct: 32 DVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRC-- 89
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M G ++TFGS++K + G LG+Q+H+ +IK + ++ A +AL+ MY K +
Sbjct: 90 -MRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCE 148
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLG------YELEALCHFNEMLHHGAYQP--- 236
++ DA F I++ + SW +MI +++ G + L+ + E + G Y P
Sbjct: 149 KLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLP 208
Query: 237 ----------NEFIFGSV------------------FSACSNF---ARILFNEIDSPDLA 265
+ G + +S C + RI + DL
Sbjct: 209 LLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLV 268
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
+WN+L+A S + A L +M++ PD + S++ AC G +H +
Sbjct: 269 TWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLV 328
Query: 326 IKMGFDSNVPVCNAILTMYAKCSV--LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
IK GF+ +VP+ NA+++MY K + AL +F+ L + D VSWNSI+ Q +E
Sbjct: 329 IKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESL-EFKDRVSWNSILTGLSQTGSSE 387
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
+ + F M ++ + DH +F+ V+ +C+ +A+ ++ Q+H K GL + FV + L+
Sbjct: 388 DAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLI 447
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
+Y KCG + AR+ F ++W++L+ GYAQ G + AL LF M V + +
Sbjct: 448 FMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEXKKVKMDHI 507
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
T V VLTACSH+GLVE+G R ME++YG+ P EH +C VDL R+G + EA+ I +
Sbjct: 508 TFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEE 567
Query: 564 MACDADIVVWKSLLAS 579
M D VWK+ L +
Sbjct: 568 MPFKPDTTVWKTFLGA 583
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 220/485 (45%), Gaps = 51/485 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ + LG++VH I+ +V + +L+MY KC LEDA + F +
Sbjct: 101 TFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSI 160
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ N VSW AMI G +Q A L M Q G T+ ++ L
Sbjct: 161 SKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTS 220
Query: 157 QLHAHVIKSEHGSHLIAQ--NALIAMYTKFDRILDARNVF-SGIARKDVTSWGSMIAAFS 213
QLH +IK HG L+ NALI Y+K + DA+ +F S +D+ +W S++AA+
Sbjct: 221 QLHGKIIK--HGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYL 278
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-----SNFARIL------------- 255
E A +M HG ++P+ + + S+ SAC SN R L
Sbjct: 279 LRSQEDLAFKLLIDMQEHG-FEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSV 337
Query: 256 ------------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
F ++ D SWN+++ G++ ++ +A+ F MR
Sbjct: 338 PISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMR 397
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ D + ++L +C T G Q+H +K G +SN V ++++ MY+KC ++
Sbjct: 398 SAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIE 457
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A F+E KN+ S++WN+++ QH Q LF M ++K DHITF V+ AC
Sbjct: 458 DARRSFEEASKNS-SITWNALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTAC 516
Query: 412 AKMASLEMVTQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVS 469
+ + +E + L C + G+ + +D+Y + G L A+ L M PD
Sbjct: 517 SHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTV 576
Query: 470 WSSLI 474
W + +
Sbjct: 577 WKTFL 581
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 165/394 (41%), Gaps = 55/394 (13%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
++ TYA L+ L ++H I+ + + N ++ Y KCGSL+DA+
Sbjct: 197 KVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKR 256
Query: 92 GFDKMPQ-RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD R++V+W +++A QE+ A KL I M + G P +++ SII AC
Sbjct: 257 IFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNEN 316
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD--RILDARNVFSGIARKDVTSWGSM 208
GR LH VIK + NALI+MY K D + +A +F + KD SW S+
Sbjct: 317 ISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSI 376
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------- 251
+ S+ G +A+ F M A + + F +V +CS+
Sbjct: 377 LTGLSQTGSSEDAVKSFLHM-RSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYG 435
Query: 252 -----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
AR F E +WNAL+ G A H N A+ LF
Sbjct: 436 LESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFF 495
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP------VCNAILT 342
M +++ D +T ++L AC + QG + ++ M D VP C +
Sbjct: 496 LMEXKKVKMDHITFVAVLTACSHIGLVEQGCK---FLRCMESDYGVPPRMEHYAC--AVD 550
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+Y + L A + +E+ D+ W + + AC
Sbjct: 551 LYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGAC 584
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 125/269 (46%), Gaps = 24/269 (8%)
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
HS +K+G ++V CN IL Y KC L +A ++F E+ DSVSWN++IA +
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMR-DSVSWNTMIAGHINCGN 79
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
E + + M + + D TF ++ A + Q+H I K G A +V+ +
Sbjct: 80 LEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSA 139
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG---- 497
L+D+Y KC L A F + + VSW+++I GYAQ G + A L M G
Sbjct: 140 LLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVD 199
Query: 498 ---VSPNLVTLVGV----LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
+P L L LT+ H +++ GL L M C+ ++ ++
Sbjct: 200 DGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTM------------CNALITSYSK 247
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
G + +A+ + A D+V W SLLA+
Sbjct: 248 CGSLDDAKRIFDSSAGIRDLVTWNSLLAA 276
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 144/304 (47%), Gaps = 16/304 (5%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC--GSLEDARMGFD 94
+Y +ISAC + GR +H ++ + V + N +++MY K GS+++A F+
Sbjct: 304 SYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFE 363
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+ ++ VSW +++ G SQ DA+K ++ M + + ++F +++++CS L + L
Sbjct: 364 SLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQL 423
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+Q+H +K S+ ++LI MY+K I DAR F ++ +W +++ +++
Sbjct: 424 GQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQ 483
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNEIDSPDLA 265
G AL F ++ + + F +V +ACS+ F R + ++ P
Sbjct: 484 HGQCNVALDLFF-LMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRM 542
Query: 266 SWNALIAGVASHSNA-NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
A + S EA +L EM + PD + L AC + QV +
Sbjct: 543 EHYACAVDLYGRSGRLEEAKALIEEMPFK---PDTTVWKTFLGACRSCGNIELACQVAGH 599
Query: 325 IIKM 328
+++M
Sbjct: 600 LLEM 603
>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 793
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 182/635 (28%), Positives = 312/635 (49%), Gaps = 59/635 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAY-DFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
N + L N +EAL+ Y + ++ ++ TY+ ++ AC+ R+L +G+ VH H
Sbjct: 39 NTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHF 98
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSL-EDARMG------------FDKMPQRNVVSWTAMI 108
L P ++ N +LNMY C S D +M FD M +R VV+W +I
Sbjct: 99 LRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLI 158
Query: 109 AGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK--SE 166
A + + +A+K + M++ G+ P +F ++ A S LG +H ++K SE
Sbjct: 159 AWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSE 218
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
+ + L ++ I MY + + A+ VF ++ W +MI+AF + + LE + F
Sbjct: 219 YVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFF 278
Query: 227 EMLHHGAYQPNEFIFGSVFSACSNFARI-------------------------------- 254
+ + +E S SA S+ +
Sbjct: 279 QAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRC 338
Query: 255 --------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
+F+ + D+ SWN +I+ + +EA+ LF EM+ ++L+ D +TV +LL
Sbjct: 339 NSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALL 398
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF-KELGKNAD 365
A G Q H Y+++ G + + ++ MYAK ++ A VF K D
Sbjct: 399 SAASDLRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQNVFEKSFSHERD 457
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
+WNS+++ Q+ ++ F + +ML ++ P+ +T ++ AC ++ QLH
Sbjct: 458 QATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHG 517
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
+ + L +VFV L+D+Y K GS+ A +F+ +V++S++ILGY Q G G+
Sbjct: 518 FSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGES 577
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
AL +F RM+ G+ P+ VTLV VL+ACS+ GLV+EGL ++ M Y I P+ EH CV
Sbjct: 578 ALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVA 637
Query: 546 DLLARAGCVHEAEDFINQMACDADIV-VWKSLLAS 579
D+L RAG V +A +F+ + +++ +W SLLA+
Sbjct: 638 DMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAA 672
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 135/556 (24%), Positives = 261/556 (46%), Gaps = 69/556 (12%)
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG--VMPGQFTFGS 141
G L AR FD +P+ + V W +I G N ++A+ Y M S V +T+ S
Sbjct: 18 GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 77
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY-------------TKFDRIL 188
++KAC+ ++ +G+ +HAH ++ I N+L+ MY + + R
Sbjct: 78 VLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCD 137
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA- 247
R VF + ++ V +W ++IA + + EA+ F+ M+ G +P+ F +VF A
Sbjct: 138 LVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGI-KPSPVSFVNVFPAF 196
Query: 248 -----------------------------------------CSNFARILFNEIDSPDLAS 266
C FA+ +F+ +
Sbjct: 197 SSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEV 256
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLP-DGLTVHSLLCACIGRLTLYQGMQVHSYI 325
WN +I+ ++ + E + LF + + E D +T+ S + A Q+H+++
Sbjct: 257 WNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFV 316
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
IK + V V NA++ MY++C+ + + +F + + D VSWN++I+A +Q+ +E
Sbjct: 317 IKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEK-DVVSWNTMISAFVQNGLNDEA 375
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
LF M + D +T ++ A + + + ++ Q H Y+ + G+ F+ + + L+D+
Sbjct: 376 LMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEG-MDSYLIDM 434
Query: 446 YIKCGSLGSARKLF--NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
Y K G + +A+ +F +F D +W+S++ GY Q G D+A + +M V PN+V
Sbjct: 435 YAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVV 494
Query: 504 TLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
TL +L AC+ G ++ G LH + I + + + ++D+ +++G + AE+
Sbjct: 495 TLASILPACNPSGYIDWGKQLHGFSIRND---LDQNVFVATALIDMYSKSGSIAHAENVF 551
Query: 562 NQMACDADIVVWKSLL 577
++ A + IV + +++
Sbjct: 552 SK-ANEKSIVTYSTMI 566
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 168/351 (47%), Gaps = 27/351 (7%)
Query: 250 NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR--ELLPDGLTVHSLLC 307
+ AR LF+ + P WN +I G+ ++ +EA+ +S M+ ++ D T S+L
Sbjct: 21 HLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLK 80
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL------------CNALL 355
AC L G VH++ ++ + + V N++L MY+ CS C+ +
Sbjct: 81 ACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVR 140
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+ + V+WN++IA ++ + E + FS M+ IKP ++F +V A + +
Sbjct: 141 KVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLG 200
Query: 416 SLEMVTQLHCYITKTGLAF--DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ +H + K G + D++V++ + +Y + G L A+K+F+ + W+++
Sbjct: 201 DFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTM 260
Query: 474 ILGYAQFGCGDEALKLFTR-MRSLGVSPNLVTLVGVLTACSHVGLVE--EGLHLYRIMEN 530
I + Q E ++LF + + S + + VTL+ ++A SH+ E E LH + I
Sbjct: 261 ISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKN- 319
Query: 531 EYGIIPTREHC--SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + C + ++ + +R + + + M + D+V W +++++
Sbjct: 320 ----VAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMP-EKDVVSWNTMISA 365
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 176/554 (31%), Positives = 284/554 (51%), Gaps = 39/554 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ + AC + S++ G H L++ +V + N ++ MY +C SL DAR FD+M
Sbjct: 129 TFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM 188
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGLGSVCLG 155
+VVSW ++I ++ + A++++ +M G P T +++ C+ LG+ LG
Sbjct: 189 SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLG 248
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+QLH + SE ++ N L+ MY K + +A VFS ++ KDV SW +M+A +S++
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVA 275
G +A+ F +M E D+ +W+A I+G A
Sbjct: 309 GRFEDAVRLFEKMQ---------------------------EEKIKMDVVTWSAAISGYA 341
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD---- 331
EA+ + +M + P+ +T+ S+L C L G ++H Y IK D
Sbjct: 342 QRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKN 401
Query: 332 ---SNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQHNQAEELFR 387
V N ++ MYAKC + A +F L K D V+W +I QH A +
Sbjct: 402 GHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALE 461
Query: 388 LFSRMLAS--QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL-AFDVFVMNGLMD 444
L S M Q +P+ T + + ACA +A+L + Q+H Y + A +FV N L+D
Sbjct: 462 LLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLID 521
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y KCGS+ AR +F+ M + V+W+SL+ GY G G+EAL +F MR +G + VT
Sbjct: 522 MYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVT 581
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
L+ VL ACSH G++++G+ + M+ +G+ P EH +C+VDLL RAG ++ A I +M
Sbjct: 582 LLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641
Query: 565 ACDADIVVWKSLLA 578
+ VVW + L+
Sbjct: 642 PMEPPPVVWVAFLS 655
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 192/449 (42%), Gaps = 89/449 (19%)
Query: 24 FSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYG 81
FS+ RP T ++ C+SL + LG+++H + S+ ++ + N +++MY
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY----------------- 124
KCG +++A F M ++VVSW AM+AG SQ + DA++L+
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335
Query: 125 ------------------IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI--- 163
QML SG+ P + T S++ C+ +G++ G+++H + I
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 164 ----KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK--DVTSWGSMIAAFSKLGY 217
K+ HG + N LI MY K ++ AR +F ++ K DV +W MI +S+ G
Sbjct: 396 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 218 ELEALCHFNEMLHHG-AYQPNEFIFGSVFSACSNF------------------------- 251
+AL +EM +PN F AC++
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR++F+ + + + +W +L+ G H EA+ +F EMR
Sbjct: 516 SNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 575
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT-MYAKCSVLCNAL 354
DG+T+ +L AC + QGM+ + + + S P A L + + L AL
Sbjct: 576 KLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAAL 635
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ +E+ V W + ++ C H + E
Sbjct: 636 RLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 156/313 (49%), Gaps = 19/313 (6%)
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
LI A+ S+ +SLFS E+ P +H C I ++ L +H ++ G
Sbjct: 6 LIPNAAAKSHQYIKVSLFSTSAP-EITPP--FIHK--CKTISQVKL-----IHQKLLSFG 55
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGK-NADSVSWNSIIAACLQHNQAEELFRL 388
+ + + + +++ Y L +A+ + + +A WNS+I + + A + L
Sbjct: 56 ILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYL 114
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
F M + PD+ TF V AC +++S+ H TG +VFV N L+ +Y +
Sbjct: 115 FGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSR 174
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS-LGVSPNLVTLVG 507
C SL ARK+F+ M DVVSW+S+I YA+ G AL++F+RM + G P+ +TLV
Sbjct: 175 CRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVN 234
Query: 508 VLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
VL C+ +G G LH + + +I +C+VD+ A+ G + EA + M+
Sbjct: 235 VLPPCASLGTHSLGKQLHCFAVTSE---MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS 291
Query: 566 CDADIVVWKSLLA 578
D+V W +++A
Sbjct: 292 VK-DVVSWNAMVA 303
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/502 (33%), Positives = 261/502 (51%), Gaps = 42/502 (8%)
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
+A+ + M+ G F +++ C+ L S+ GR++HA ++KS + +N L
Sbjct: 78 KEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTL 137
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
++MY K + DAR VF GI +++ SW +MI AF LEA + M G +P+
Sbjct: 138 LSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGC-KPD 196
Query: 238 EFIFGSVFSACSN----------------------------------------FARILFN 257
+ F S+ +A +N A+++F+
Sbjct: 197 KVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFD 256
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
++ ++ +W LIAG A + A+ L +M+ E+ P+ +T S+L C L L
Sbjct: 257 KLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEH 316
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G +VH YII+ G+ + V NA++TMY KC L A +F +L + D V+W +++
Sbjct: 317 GKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDL-PHRDVVTWTAMVTGYA 375
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
Q +E LF RM IKPD +TF + +C+ A L+ +H + G + DV+
Sbjct: 376 QLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVY 435
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
+ + L+ +Y KCGS+ AR +FN M +VV+W+++I G AQ G EAL+ F +M+ G
Sbjct: 436 LQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQG 495
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
+ P+ VT VL+AC+HVGLVEEG +R M +YGI P EH SC VDLL RAG + EA
Sbjct: 496 IKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEA 555
Query: 558 EDFINQMACDADIVVWKSLLAS 579
E+ I M VW +LL++
Sbjct: 556 ENVILTMPFQPGPSVWGALLSA 577
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 139/457 (30%), Positives = 222/457 (48%), Gaps = 51/457 (11%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNI----RIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
VS LCKQ EAL NT I R+ + GL+ C+ LRSL+ GR+VH I
Sbjct: 68 VSILCKQGRLKEALGIL-----NTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAI 122
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
L S QP+ L+N +L+MY KCGSL DAR FD + RN+VSWTAMI Q +A
Sbjct: 123 LKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAY 182
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
K Y M +G P + TF S++ A + + +G+++H + K+ +L+ MY
Sbjct: 183 KCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMY 242
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K I A+ +F + K+V +W +IA +++ G +++ E + PN+ +
Sbjct: 243 AKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQG-QVDVALELLEKMQQAEVAPNKITY 301
Query: 242 GSVFSACS----------------------------------------NFARILFNEIDS 261
S+ C+ AR LF ++
Sbjct: 302 TSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPH 361
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
D+ +W A++ G A +EA+ LF M+ + + PD +T S L +C L +G +
Sbjct: 362 RDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSI 421
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H ++ G+ +V + +A+++MYAKC + +A LVF ++ + + V+W ++I C QH +
Sbjct: 422 HQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSER-NVVAWTAMITGCAQHGR 480
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
E F +M IKPD +TF V+ AC + +E
Sbjct: 481 CREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVE 517
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 220/455 (48%), Gaps = 50/455 (10%)
Query: 16 NEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQ 73
N+ L AY + +P T+ L++A ++ LQ+G+KVH I + + + +
Sbjct: 176 NQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVG 235
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
++ MY KCG + A++ FDK+P++NVV+WT +IAG +Q Q + A++L +M Q+ V
Sbjct: 236 TSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVA 295
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P + T+ SI++ C+ ++ G+++H ++I+S +G + NALI MY K + +AR +
Sbjct: 296 PNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKL 355
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---- 249
F + +DV +W +M+ +++LG+ EA+ F M G +P++ F S ++CS
Sbjct: 356 FGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQG-IKPDKMTFTSALTSCSSPAF 414
Query: 250 ------------------------------------NFARILFNEIDSPDLASWNALIAG 273
+ AR++FN++ ++ +W A+I G
Sbjct: 415 LQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITG 474
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDS 332
A H EA+ F +M+ + + PD +T S+L AC + +G + S + G
Sbjct: 475 CAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKP 534
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
V + + + + L A V + W ++++AC H+ E R +
Sbjct: 535 MVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENV 594
Query: 393 LASQIKPD----HITFNDVMGACAKMASLEMVTQL 423
L ++ PD ++ +++ A + E V Q+
Sbjct: 595 L--KLDPDDDGAYVALSNIYAAAGRYEDAEKVRQV 627
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 116/218 (53%), Gaps = 4/218 (1%)
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
+ D+++ + ++ + + +E + + M+ + F ++ CA++ SLE
Sbjct: 57 RKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGR 116
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
++H I K+G+ + ++ N L+ +Y KCGSL AR++F+ + + ++VSW+++I +
Sbjct: 117 EVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGN 176
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME-NEYGIIPTREH 540
EA K + M+ G P+ VT V +L A ++ L++ G ++ ME + G+
Sbjct: 177 QNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVH--MEIAKAGLELEPRV 234
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +V + A+ G + +A+ +++ + ++V W L+A
Sbjct: 235 GTSLVGMYAKCGDISKAQVIFDKLP-EKNVVTWTLLIA 271
>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 184/615 (29%), Positives = 307/615 (49%), Gaps = 46/615 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS L Q +++ L Y S T+ ++ T+ L AC++L G +H ++
Sbjct: 18 NSLVSRLSYQGAHHQVLQTY-ISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVV 76
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ D + + +++ Y K G + R FD M +RNVV WT +I S+ + A
Sbjct: 77 VNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFS 136
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ QM +SG+ P T S++ G+ + L LH +I S L N+++ MY
Sbjct: 137 MFKQMRESGIQPTSVTLLSLL---PGISKLPLLLCLHCLIILHGFESDLALSNSMVNMYG 193
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K RI DAR +F I +D+ SW S+++A+SK+G E + + + +P++ F
Sbjct: 194 KCGRIADARRLFESIGCRDIVSWNSLLSAYSKIG-ATEEILQLLQAMKIEDIKPDKQTFC 252
Query: 243 SVFSA----------------------------------------CSNFARILFNEIDSP 262
S SA C + A +F
Sbjct: 253 SALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEK 312
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ W A+I+G+ + A++A+ +F +M + + P T+ S L AC G +H
Sbjct: 313 DVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIH 372
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
Y+++ G ++P N+++TMYAKC+ L + +F ++ + D VSWN+I+A ++
Sbjct: 373 GYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEK-DLVSWNAIVAGHAKNGYL 431
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
+ F+ M S ++PD IT ++ AC +L +H ++ ++ L + L
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 491
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y KCG+L +A+K F+ M D+V+WS+LI+GY G G+ AL+ ++ G+ PN
Sbjct: 492 VDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNH 551
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
V + VL+ACSH GL+ +GL +Y M ++ + P EH +CVVDLL+RAG V EA F
Sbjct: 552 VIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYK 611
Query: 563 QMACDADIVVWKSLL 577
M + IVV LL
Sbjct: 612 MMFKEPSIVVLGMLL 626
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 237/514 (46%), Gaps = 45/514 (8%)
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
S+ ++++ S + ++ YI M ++ +TF S+ KAC+ L G LH V
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 163 IKS--EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+ + H S++ ++LI+ Y KF I R VF + +++V W ++I ++S+ G
Sbjct: 76 VVNGLSHDSYI--GSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDI 133
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------------- 251
A F +M G QP S+ S
Sbjct: 134 AFSMFKQMRESG-IQPTSVTLLSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMVNMY 192
Query: 252 --------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
AR LF I D+ SWN+L++ + E + L M+ ++ PD T
Sbjct: 193 GKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFC 252
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
S L A + L G VH ++K G + + V +A++ +Y +C L A VFK +
Sbjct: 253 SALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEK 312
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
D V W ++I+ +Q++ A++ +F +M+ S +KP T + ACA++ ++ +
Sbjct: 313 -DVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASI 371
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H Y+ + G+ D+ N L+ +Y KC L + +FN M D+VSW++++ G+A+ G
Sbjct: 372 HGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYL 431
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
+ + F MR + P+ +T+ +L AC G + +G ++ + +IP +
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRS-SLIPCIMTETA 490
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+VD+ + G + A+ + M D+V W +L+
Sbjct: 491 LVDMYFKCGNLENAQKCFDCM-LQRDLVAWSTLI 523
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 201/445 (45%), Gaps = 45/445 (10%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
+I+ T+ +SA + L+LG+ VH +L D +++ ++ +Y +C L+ A
Sbjct: 243 DIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPA 302
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F +++VV WTAMI+G QN + A+ ++ QM++S V P T S + AC+ L
Sbjct: 303 YKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQL 362
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G +G +H +V++ + AQN+L+ MY K +++ + ++F+ + KD+ SW +++
Sbjct: 363 GCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIV 422
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------NF------ 251
A +K GY + + FNEM +P+ S+ AC NF
Sbjct: 423 AGHAKNGYLSKGIFFFNEM-RKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSL 481
Query: 252 ----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
A+ F+ + DL +W+ LI G + A+ +SE
Sbjct: 482 IPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSE 541
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCS 348
+ P+ + S+L AC + +G+ ++ + K N+ ++ + ++
Sbjct: 542 FLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAG 601
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP-DHITFNDV 407
+ A +K + K V ++ AC + N EL ++ +R + ++KP D F +
Sbjct: 602 KVDEAYSFYKMMFKEPSIVVLGMLLDAC-RVNGRVELGKVIARDMF-ELKPVDPGNFVQL 659
Query: 408 MGACAKMASLEMVTQLHCYITKTGL 432
+ A M+ + V + + GL
Sbjct: 660 ANSYASMSRWDGVEKAWTQMRSLGL 684
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 5/212 (2%)
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
S+NS+++ ++ + + M + + D TF + AC + LH +
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
GL+ D ++ + L+ Y K G + RK+F+ M +VV W+++I Y++ G D A
Sbjct: 76 VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
+F +MR G+ P VTL+ +L S + L+ L + E + + +V++
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIILHGFESDLALSNS----MVNM 191
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ G + +A + C DIV W SLL++
Sbjct: 192 YGKCGRIADARRLFESIGC-RDIVSWNSLLSA 222
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/502 (34%), Positives = 257/502 (51%), Gaps = 42/502 (8%)
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
++AI + + LQ G++ F + ++K C + +Q+H +IKS + N L
Sbjct: 10 SEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNL 69
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
+ +Y + R+ +AR VF + +K SW +MIA + + + +A+ F EM H G QPN
Sbjct: 70 LHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGV-QPN 128
Query: 238 EFIFGSVFSACS----------------------------------------NFARILFN 257
+ + AC+ N AR +F+
Sbjct: 129 AGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFD 188
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
+ + D+ SW +I A N EA L +M P+ +T S+L AC L
Sbjct: 189 NLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKW 248
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
+VH + + G + +V V A++ MYAK + +A +VF + K D VSWN +I A
Sbjct: 249 VKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRM-KVRDVVSWNVMIGAFA 307
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
+H + E + LF +M KPD I F ++ ACA +LE V ++H + +GL DV
Sbjct: 308 EHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVR 367
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
V L+ +Y K GS+ AR +F+ M+ +VVSW+++I G AQ G G +AL++F RM + G
Sbjct: 368 VGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHG 427
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
V P+ VT V VL+ACSH GLV+EG Y M YGI P HC+C+VDLL RAG + EA
Sbjct: 428 VKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEA 487
Query: 558 EDFINQMACDADIVVWKSLLAS 579
+ FI+ MA D D W +LL S
Sbjct: 488 KLFIDNMAVDPDEATWGALLGS 509
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 138/487 (28%), Positives = 241/487 (49%), Gaps = 46/487 (9%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y ++ C + L ++VHD I+ S+ + + + N++L++Y +CG L++AR FD +
Sbjct: 31 YVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALV 90
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+++ SW AMIAG ++ DA++L+ +M GV P T+ I+KAC+ L ++ G++
Sbjct: 91 KKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKE 150
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+HA + S + AL+ MY K I +AR +F + D+ SW MI A+++ G
Sbjct: 151 VHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGN 210
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------------------- 249
EA +M G ++PN + S+ +AC+
Sbjct: 211 GKEAYRLMLQMEQEG-FKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGT 269
Query: 250 ------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
+ AR++F+ + D+ SWN +I A H +EA LF +M+ P
Sbjct: 270 ALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKP 329
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D + S+L AC L ++H + + G + +V V A++ MY+K + +A +VF
Sbjct: 330 DAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVF 389
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+ K + VSWN++I+ QH ++ +F RM A +KPD +TF V+ AC+ +
Sbjct: 390 DRM-KVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLV 448
Query: 418 EMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLF--NFMENPDVVSWSSLI 474
+ + +T+ G+ DV N ++D+ + G L A KLF N +PD +W +L+
Sbjct: 449 DEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEA-KLFIDNMAVDPDEATWGALL 507
Query: 475 LGYAQFG 481
+G
Sbjct: 508 GSCRTYG 514
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 193/394 (48%), Gaps = 44/394 (11%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++P+ TY ++ AC+SL +L+ G++VH I + DV + +L MYGKCGS+ +AR
Sbjct: 125 VQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEAR 184
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD + +++SWT MI +Q+ +A +L +QM Q G P T+ SI+ AC+ G
Sbjct: 185 RIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEG 244
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ +++H H + + + AL+ MY K I DAR VF + +DV SW MI
Sbjct: 245 ALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIG 304
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------- 249
AF++ G EA F +M G +P+ +F S+ +AC+
Sbjct: 305 AFAEHGRGHEAYDLFLQMQTEGC-KPDAIMFLSILNACASAGALEWVKKIHRHALDSGLE 363
Query: 250 -------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ AR++F+ + ++ SWNA+I+G+A H +A+ +F M
Sbjct: 364 VDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRM 423
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSV 349
+ PD +T ++L AC + +G + + ++ G + +V CN ++ + +
Sbjct: 424 TAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGR 483
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A L + + D +W +++ +C + E
Sbjct: 484 LMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVE 517
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 161/306 (52%), Gaps = 3/306 (0%)
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
V + + +EA+ + R L+ D +L C+ + L QVH IIK + N
Sbjct: 3 VQTANTLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQN 62
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
V N +L +Y +C L A VF L K + + SWN++IA ++H AE+ RLF M
Sbjct: 63 AHVMNNLLHVYIECGRLQEARCVFDALVKKSGA-SWNAMIAGYVEHKHAEDAMRLFREMC 121
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
++P+ T+ ++ ACA +++L+ ++H I GL DV V L+ +Y KCGS+
Sbjct: 122 HEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSIN 181
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
AR++F+ + N D++SW+ +I YAQ G G EA +L +M G PN +T V +L AC+
Sbjct: 182 EARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACA 241
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
G ++ ++R + G+ + +V + A++G + +A ++M D+V W
Sbjct: 242 SEGALKWVKRVHR-HALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKV-RDVVSW 299
Query: 574 KSLLAS 579
++ +
Sbjct: 300 NVMIGA 305
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 188/605 (31%), Positives = 298/605 (49%), Gaps = 43/605 (7%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
++ AL+ Y F +N+ T+ +I AC L ++ L VHD D+ +
Sbjct: 93 FDFALLFY-FKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGS 151
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
++ +Y G + DAR FD++P R+ + W M+ G ++ ++AI + +M S M
Sbjct: 152 ALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMV 211
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
T+ I+ C+ G+ C G QLH VI S N L+AMY+K +L AR +F
Sbjct: 212 NSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLF 271
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA------- 247
+ + + D +W +IA + + G+ EA FN M+ G +P+ F S +
Sbjct: 272 NTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGV-KPDSVTFASFLPSILESGSL 330
Query: 248 --CSN-------------------------------FARILFNEIDSPDLASWNALIAGV 274
C AR +F + D+A A+I+G
Sbjct: 331 RHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGY 390
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
H +A++ F + ++ + LT+ S+L AC L G ++H +I+K ++ V
Sbjct: 391 VLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIV 450
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V +AI MYAKC L A F+ + + DSV WNS+I++ Q+ + E LF +M
Sbjct: 451 NVGSAITDMYAKCGRLDLAYEFFRRM-SDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGM 509
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
S K D ++ + + A A + +L ++H Y+ + + D FV + L+D+Y KCG+L
Sbjct: 510 SGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLAL 569
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
A +FN M+ + VSW+S+I Y GC E L L+ M G+ P+ VT + +++AC H
Sbjct: 570 AWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGH 629
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
GLV+EG+H + M EYGI EH +C+VDL RAG VHEA D I M D VW
Sbjct: 630 AGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWG 689
Query: 575 SLLAS 579
+LL +
Sbjct: 690 TLLGA 694
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 218/481 (45%), Gaps = 48/481 (9%)
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
S+ +ACS V RQ+H VI G + ++ +Y R DA N+F + +
Sbjct: 16 SLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELR 75
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------- 251
W MI LG+ AL + +ML P+++ F V AC
Sbjct: 76 YALPWNWMIRGLYMLGWFDFALLFYFKMLGSNV-SPDKYTFPYVIKACGGLNNVPLCMVV 134
Query: 252 -------------------------------ARILFNEIDSPDLASWNALIAGVASHSNA 280
AR +F+E+ D WN ++ G +
Sbjct: 135 HDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDF 194
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
+ A+ F EMR + + +T +L C R G Q+H +I GF+ + V N +
Sbjct: 195 DNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTL 254
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+ MY+KC L A +F + D+V+WN +IA +Q+ +E LF+ M+++ +KPD
Sbjct: 255 VAMYSKCGNLLYARKLFNTM-PQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPD 313
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
+TF + + + SL ++H YI + + FDV++ + L+D+Y K G + ARK+F
Sbjct: 314 SVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQ 373
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
DV +++I GY G +A+ F + G+ N +T+ VL AC+ V ++
Sbjct: 374 QNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKP 433
Query: 521 G--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G LH + + + I+ S + D+ A+ G + A +F +M+ D D V W S+++
Sbjct: 434 GKELHCHILKKRLENIVNVG---SAITDMYAKCGRLDLAYEFFRRMS-DRDSVCWNSMIS 489
Query: 579 S 579
S
Sbjct: 490 S 490
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 221/492 (44%), Gaps = 40/492 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L ACS +Q R+VH +++ + +L +Y CG DA F ++ R
Sbjct: 17 LFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRY 76
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+ W MI G + A+ Y +ML S V P ++TF +IKAC GL +V L +H
Sbjct: 77 ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHD 136
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
L A +ALI +Y I DAR VF + +D W M+ + K G
Sbjct: 137 TARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDN 196
Query: 221 ALCHFNEMLH-----------------------------HGAYQPNEFIFG--------S 243
A+ F EM HG + F F +
Sbjct: 197 AIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVA 256
Query: 244 VFSACSN--FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
++S C N +AR LFN + D +WN LIAG + +EA LF+ M + PD +T
Sbjct: 257 MYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVT 316
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
S L + + +L +VHSYI++ +V + +A++ +Y K + A +F++
Sbjct: 317 FASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQ-N 375
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
D ++I+ + H + F ++ + + +T V+ ACA +A+L+
Sbjct: 376 ILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGK 435
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
+LHC+I K L V V + + D+Y KCG L A + F M + D V W+S+I ++Q G
Sbjct: 436 ELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNG 495
Query: 482 CGDEALKLFTRM 493
+ A+ LF +M
Sbjct: 496 KPEIAIDLFRQM 507
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 186/403 (46%), Gaps = 43/403 (10%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++P T+A + + SL+ ++VH +I+ + DV L++ ++++Y K G +E AR
Sbjct: 310 VKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMAR 369
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F + +V TAMI+G + DAI + ++Q G++ T S++ AC+ +
Sbjct: 370 KIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVA 429
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G++LH H++K + + +A+ MY K R+ A F ++ +D W SMI+
Sbjct: 430 ALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMIS 489
Query: 211 AFSKLGYELEALCHFNEM------------------------LHHG----------AYQP 236
+FS+ G A+ F +M L++G A+
Sbjct: 490 SFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSS 549
Query: 237 NEFIFGSV---FSACSNFARI--LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
+ F+ ++ +S C N A +FN +D + SWN++IA +H E + L+ EM
Sbjct: 550 DTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEML 609
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ PD +T ++ AC + +G+ H + G + + ++ +Y + +
Sbjct: 610 RAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRV 669
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
A K + D+ W +++ AC H EL +L SR L
Sbjct: 670 HEAFDTIKSMPFTPDAGVWGTLLGACRLHGNV-ELAKLASRHL 711
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 5/283 (1%)
Query: 298 DGLT--VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
D LT + SL AC + Q QVH+ +I G + +L +Y C +A
Sbjct: 8 DSLTTQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGN 67
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F EL ++ WN +I + + +ML S + PD TF V+ AC +
Sbjct: 68 LFFELELRY-ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLN 126
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
++ + +H G D+F + L+ +Y G + AR++F+ + D + W+ ++
Sbjct: 127 NVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLR 186
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
GY + G D A+ F MR+ N VT +L+ C+ G G L+ ++ G
Sbjct: 187 GYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGS-GFE 245
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ + +V + ++ G + A N M D V W L+A
Sbjct: 246 FDPQVANTLVAMYSKCGNLLYARKLFNTMP-QTDTVTWNGLIA 287
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 197/613 (32%), Positives = 306/613 (49%), Gaps = 49/613 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+ +LC +AL + S + Y L C R+++ G + H
Sbjct: 69 LRALCSHGQLAQALWLLESSAEPPD----EDAYVALFRLCEWRRAVEPGLRACAHADDRH 124
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ L N +L+M + G A F KMP+R+V SW M+ G + +A+ LY
Sbjct: 125 AWFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYH 184
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M+ +GV P +TF ++++C G+ +GR++HAHV++ + NAL+ MY K
Sbjct: 185 RMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCG 244
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
++ AR VF +A D SW +MIA + G L F ML QPN SV
Sbjct: 245 DVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQD-EVQPNLMTITSVT 303
Query: 246 SA----------------------------CSNF------------ARILFNEIDSPDLA 265
A C++ AR +F+ +D+ D
Sbjct: 304 VASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAM 363
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW A+I+G + ++A+ +++ M + PD +T+ S L AC +L G+++H
Sbjct: 364 SWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELA 423
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA-CLQHNQAEE 384
GF S V V NA+L MYAK + A+ VFK + + D VSW+S+IA C H E
Sbjct: 424 ESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEK-DVVSWSSMIAGFCFNHRNFEA 482
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
L+ F MLA +KP+ +TF + ACA +L ++H ++ + G+A++ ++ N L+D
Sbjct: 483 LY-YFRHMLA-DVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALID 540
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y+KCG G A F DVVSW+ +I G+ G G+ AL F +M +G P+ VT
Sbjct: 541 LYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVT 600
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
V +L ACS G+V EG L+ M ++Y I+P +H +C+VDLL+R G + EA +FIN+M
Sbjct: 601 FVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEM 660
Query: 565 ACDADIVVWKSLL 577
D VW +LL
Sbjct: 661 PITPDAAVWGALL 673
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/517 (25%), Positives = 224/517 (43%), Gaps = 48/517 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N V K L EAL D +RP T+ ++ +C + ++GR+VH H
Sbjct: 164 NVMVGGYGKAGLLEEAL---DLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAH 220
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+L +V + N ++ MY KCG + AR FD M + +SW AMIAG +N + N
Sbjct: 221 VLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAG 280
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
++L++ MLQ V P T S+ A L + +++H +K + + N+LI M
Sbjct: 281 LELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQM 340
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL------------------ 222
Y + AR VFS + +D SW +MI+ + K G+ +AL
Sbjct: 341 YASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITI 400
Query: 223 ----------------CHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS 261
+E+ + + ++ + RI +F +
Sbjct: 401 ASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPE 460
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
D+ SW+++IAG + EA+ F M ++ P+ +T + L AC L G ++
Sbjct: 461 KDVVSWSSMIAGFCFNHRNFEALYYFRHML-ADVKPNSVTFIAALAACAATGALRSGKEI 519
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H+++++ G + NA++ +Y KC A F G D VSWN +IA + H
Sbjct: 520 HAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAK-DVVSWNIMIAGFVAHGN 578
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL-HCYITKTGLAFDVFVMN 440
E F++M+ PD +TF ++ AC++ + +L H K + ++
Sbjct: 579 GETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYA 638
Query: 441 GLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILG 476
++D+ + G L A N M PD W +L+ G
Sbjct: 639 CMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNG 675
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/540 (30%), Positives = 277/540 (51%), Gaps = 65/540 (12%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N +L+ Y K G ++ + FD++PQR+ VSWT MI G Q + AI++ +M++ G+
Sbjct: 84 NTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIE 143
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P QFT +++ + + + G+++H+ ++K ++ N+L+ MY K + A+ V
Sbjct: 144 PSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVV 203
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR 253
F + KD++SW +MIA ++G A+ F +M
Sbjct: 204 FDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAER---------------------- 241
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGR 312
D+ +WN++I+G A+ +FS+M RD L PD T+ S+L AC
Sbjct: 242 ---------DIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANL 292
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG----------- 361
L G Q+HS+I+ GFD + V NA+++MY++C + A + ++ G
Sbjct: 293 EKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTA 352
Query: 362 ---------------------KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
K+ D V+W ++I QH E LF M+ + +P+
Sbjct: 353 LLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPN 412
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T ++ + +ASL Q+H K+G + V V N L+ +Y K GS+ SA + F+
Sbjct: 413 SYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFD 472
Query: 461 FME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ D VSW+S+I+ AQ G +EAL+LF M G+ P+ +T VGV +AC+H GLV
Sbjct: 473 LIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVN 532
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+G + +M++ IIPT H +C+VDL RAG + EA++FI +M + D+V W SLL++
Sbjct: 533 QGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 144/585 (24%), Positives = 235/585 (40%), Gaps = 145/585 (24%)
Query: 35 PSTYAGLISACSSLRSLQLGRK--------VHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
P + + L+ C++L + + VH ++ S V L N+++N+Y K G
Sbjct: 6 PLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYA 65
Query: 87 EDARMGFDKMPQRNV-------------------------------VSWTAMIAGCSQNY 115
AR FD+MP R VSWT MI G
Sbjct: 66 LHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIG 125
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
Q + AI++ +M++ G+ P QFT +++ + + + G+++H+ ++K ++ N
Sbjct: 126 QYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSN 185
Query: 176 ALIAMYTK----------FDRILD---------------------ARNVFSGIARKDVTS 204
+L+ MY K FDR++ A F +A +D+ +
Sbjct: 186 SLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVT 245
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------- 251
W SMI+ +++ GY+L AL F++ML P+ F SV SAC+N
Sbjct: 246 WNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHI 305
Query: 252 ---------------------------ARILFNEIDSPDLA--SWNALIAGVASHSNANE 282
AR L + + DL + AL+ G + NE
Sbjct: 306 VTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNE 365
Query: 283 AMSLFSEMRDRELL-------------------------------PDGLTVHSLLCACIG 311
A ++F ++DR+++ P+ T+ ++L
Sbjct: 366 AKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASS 425
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+L G Q+H +K G +V V NA++TMYAK + +A F + D+VSW S
Sbjct: 426 LASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTS 485
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+I A QH AEE LF ML ++PDHIT+ V AC + Q +
Sbjct: 486 MIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVD 545
Query: 432 LAFDVFVMNGLM-DIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
M D++ + G L A++ M PDVV+W SL+
Sbjct: 546 KIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLL 590
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 195/455 (42%), Gaps = 114/455 (25%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I PS T ++++ ++ R L+ G+KVH I+ + +V + N +LNMY KCG A+
Sbjct: 142 IEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 91 MGFDK-------------------------------MPQRNVVSWTAMIAGCSQNYQEND 119
+ FD+ M +R++V+W +MI+G +Q +
Sbjct: 202 VVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLR 261
Query: 120 AIKLYIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
A+ ++ +ML+ ++ P +FT S++ AC+ L +C+G Q+H+H++ + I NALI
Sbjct: 262 ALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALI 321
Query: 179 AMYTK-----------------------FDRILD----------ARNVFSGIARKDVTSW 205
+MY++ F +LD A+N+F + +DV +W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAW 381
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR-----------I 254
+MI + + G EA+ F M+ +PN + ++ S S+ A +
Sbjct: 382 TAMIVGYEQHGLYGEAINLFRSMVGE-EQRPNSYTLAAMLSVASSLASLGHGKQIHGSAV 440
Query: 255 LFNEIDS------------------------------PDLASWNALIAGVASHSNANEAM 284
EI S D SW ++I +A H +A EA+
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN---AIL 341
LF M L PD +T + AC + QG Q + + D +P + ++
Sbjct: 501 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSHYACMV 558
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
++ + +L A +++ D V+W S+++AC
Sbjct: 559 DLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSAC 593
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 113/257 (43%), Gaps = 40/257 (15%)
Query: 11 KQNLYNEALVAYDFSQNNTNIRIRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQP 68
+ LY EA+ + ++ RP++Y A ++S SSL SL G+++H + S
Sbjct: 390 QHGLYGEAI---NLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIY 446
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMP-QRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
V + N ++ MY K GS+ A FD + +R+ VSWT+MI +Q+ +A++L+ M
Sbjct: 447 SVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
L G+ P T+ + AC+ G V GRQ FD +
Sbjct: 507 LMEGLRPDHITYVGVFSACTHAGLVNQGRQY-------------------------FDMM 541
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
D + ++ + M+ F + G EA E + +P+ +GS+ SA
Sbjct: 542 KDVDKIIPTLSH-----YACMVDLFGRAGLLQEA----QEFIEKMPIEPDVVTWGSLLSA 592
Query: 248 CSNFARILFNEIDSPDL 264
C + I ++ + L
Sbjct: 593 CRVYKNIDLGKVAAERL 609
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 33/187 (17%)
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM-------------------- 462
+HC + K+GL F V++MN LM++Y K G ARKLF+ M
Sbjct: 36 VHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGD 95
Query: 463 -----------ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
D VSW+++I+GY G +A+++ M G+ P+ TL VL +
Sbjct: 96 MDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLAS 155
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
+ +E G ++ + + G+ + ++++ A+ G A+ ++M DI
Sbjct: 156 VAATRCLETGKKVHSFIV-KLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVV-KDIS 213
Query: 572 VWKSLLA 578
W +++A
Sbjct: 214 SWNAMIA 220
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/572 (30%), Positives = 289/572 (50%), Gaps = 43/572 (7%)
Query: 48 LRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAM 107
LR+ + +K+ ++ + PD L + ++N+Y KC SL+ AR ++MP ++V W
Sbjct: 2 LRAKYILKKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQK 61
Query: 108 IAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
++ + Y +A++L+ M + + QF F S+I A + LG G +HA V K
Sbjct: 62 LSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGF 121
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
S ++ NA + MY K + + F + +++ S ++++ F + +
Sbjct: 122 ESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQ 181
Query: 228 MLHHGAYQPNEFIFGSVFSACS-------------------------------------- 249
+L G ++PN + F S+ C+
Sbjct: 182 LLVEG-FEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCG 240
Query: 250 --NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC 307
N+A +F EI D+ SW ALI G + + + +F++M P+ T S+L
Sbjct: 241 SANYACKVFGEIPERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILR 299
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
+C + G QVH+ I+K D N V A++ MYAK L +A +F L K D
Sbjct: 300 SCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKR-DLF 358
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
+W I+A Q Q E+ + F +M +KP+ T + C+++A+L+ QLH
Sbjct: 359 AWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMA 418
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K G + D+FV + L+D+Y KCG + A +F+ + + D VSW+++I GY+Q G G +AL
Sbjct: 419 IKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKAL 478
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
K F M G P+ VT +GVL+ACSH+GL+EEG + + YGI PT EH +C+VD+
Sbjct: 479 KAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDI 538
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
L RAG HE E FI +M +++++W+++L +
Sbjct: 539 LGRAGKFHEVESFIEEMKLTSNVLIWETVLGA 570
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 147/512 (28%), Positives = 232/512 (45%), Gaps = 55/512 (10%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
+T IR+ +A LISA +SL G +H + + D+++ N + MY K S+E
Sbjct: 83 HTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVE 142
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
+ F M N+ S +++G + ++ IQ+L G P +TF SI+K C+
Sbjct: 143 NGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCA 202
Query: 148 GLGSVCLGRQLHAHVIKS--EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
G + G+ +H VIKS SHL N+L+ +Y K A VF I +DV SW
Sbjct: 203 SKGDLNEGKAIHGQVIKSGINPDSHL--WNSLVNVYAKCGSANYACKVFGEIPERDVVSW 260
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------- 251
++I F GY L FN+ML G + PN + F S+ +CS+
Sbjct: 261 TALITGFVAEGYG-SGLRIFNQMLAEG-FNPNMYTFISILRSCSSLSDVDLGKQVHAQIV 318
Query: 252 --------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
A +FN + DL +W ++AG A +A+
Sbjct: 319 KNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVK 378
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
F +M+ + P+ T+ S L C TL G Q+HS IK G ++ V +A++ MYA
Sbjct: 379 CFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYA 438
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
KC + +A +VF L + D+VSWN+II QH Q + + F ML PD +TF
Sbjct: 439 KCGCVEDAEVVFDGL-VSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFI 497
Query: 406 DVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME- 463
V+ AC+ M +E + ++K G+ + ++DI + G M+
Sbjct: 498 GVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKL 557
Query: 464 NPDVVSWSSLI-----LGYAQFGCGDEALKLF 490
+V+ W +++ G +FG A+KLF
Sbjct: 558 TSNVLIWETVLGACKMHGNIEFG-ERAAMKLF 588
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 195/420 (46%), Gaps = 51/420 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ C+S L G+ +H ++ S PD L N ++N+Y KCGS A F ++
Sbjct: 193 TFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEI 252
Query: 97 PQRNVVSWTAMIAG-CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
P+R+VVSWTA+I G ++ Y ++++ QML G P +TF SI+++CS L V LG
Sbjct: 253 PERDVVSWTALITGFVAEGY--GSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG 310
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+Q+HA ++K+ + AL+ MY K + DA +F+ + ++D+ +W ++A +++
Sbjct: 311 KQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQD 370
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA----------------------- 252
G +A+ F +M G +PNEF S S CS A
Sbjct: 371 GQGEKAVKCFIQMQREGV-KPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFV 429
Query: 253 -----------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
++F+ + S D SWN +I G + H +A+ F M D
Sbjct: 430 ASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGT 489
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCNAL 354
+PD +T +L AC + +G + + + K+ G + ++ + +
Sbjct: 490 VPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVE 549
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAE----ELFRLFSRMLASQIKPDHITFNDVMGA 410
+E+ ++ + W +++ AC H E +LF L +I ++I +++ A
Sbjct: 550 SFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFE--LEPEIDSNYILLSNMFAA 607
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 157/489 (32%), Positives = 264/489 (53%), Gaps = 34/489 (6%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F+ + + N++ W M G + + A+KLY+ M+ G++P +TF ++K+C+ L +
Sbjct: 20 FETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKAS 79
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G Q+H HV+K + L +LI+MY + +R+ DA VF + +DV S+ +++ +
Sbjct: 80 KEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGY 139
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
+ GY +E+ AR +F+EI D+ SWNA+I+
Sbjct: 140 ASRGY-IES------------------------------ARNMFDEIPVKDVVSWNAMIS 168
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G N EA+ LF EM + PD T+ +++ A ++ G QVHS+I GF S
Sbjct: 169 GYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGS 228
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N+ + NA++ Y+KC + A +F L D +SWN +I N +E LF M
Sbjct: 229 NLKIVNALIDFYSKCGEMETACGLFLGLSYK-DVISWNILIGGYTHLNLYKEALLLFQEM 287
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFDVFVMNGLMDIYIKCG 450
L S P+ +T ++ ACA + ++++ +H YI K G+ + L+D+Y KCG
Sbjct: 288 LRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCG 347
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ +A ++FN M + + +W+++I G+A G + A +F+RMR + P+ +T VG+L+
Sbjct: 348 DIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLS 407
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSH G+++ G H++R M + Y I P EH C++DLL +G EAE+ I+ M + D
Sbjct: 408 ACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDG 467
Query: 571 VVWKSLLAS 579
V+W SLL +
Sbjct: 468 VIWCSLLKA 476
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 176/359 (49%), Gaps = 34/359 (9%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+A +F I P+L WN + G A + A+ L+ M LLP+ T LL +C
Sbjct: 15 YAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCA 74
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK------------ 358
+G+Q+H +++K+G++ ++ V ++++MY + L +A VF
Sbjct: 75 KLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTA 134
Query: 359 -----------ELGKN-------ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
E +N D VSWN++I+ ++ +E LF M+ + ++PD
Sbjct: 135 LVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPD 194
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T V+ A A+ S+E+ Q+H +I G ++ ++N L+D Y KCG + +A LF
Sbjct: 195 ESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFL 254
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
+ DV+SW+ LI GY EAL LF M G SPN VT++ +L AC+H+G ++
Sbjct: 255 GLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDI 314
Query: 521 G--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
G +H+Y I + G+ + ++D+ ++ G + A N M + W +++
Sbjct: 315 GRWIHVY-IDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM-LHKSLPAWNAMI 371
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 188/427 (44%), Gaps = 87/427 (20%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA------- 89
T+ L+ +C+ L++ + G ++H H+L + D+ + +++MY + LEDA
Sbjct: 65 TFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRS 124
Query: 90 ------------------------RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
R FD++P ++VVSW AMI+G + +A++L+
Sbjct: 125 SHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFK 184
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M+++ V P + T ++I A + GS+ LGRQ+H+ + GS+L NALI Y+K
Sbjct: 185 EMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCG 244
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A +F G++ KDV SW +I ++ L EAL F EML G PN+ S+
Sbjct: 245 EMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGE-SPNDVTMLSIL 303
Query: 246 SACSNFARI------------------------------------------LFNEIDSPD 263
AC++ I +FN +
Sbjct: 304 HACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKS 363
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC-------IGRLTLY 316
L +WNA+I G A H AN A +FS MR E+ PD +T LL AC +GR ++
Sbjct: 364 LPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGR-HIF 422
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+ M H+Y I + ++ + + A + + D V W S++ AC
Sbjct: 423 RSM-THNYKITPKLEH----YGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKAC 477
Query: 377 LQHNQAE 383
H E
Sbjct: 478 KMHGNVE 484
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 154/319 (48%), Gaps = 17/319 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + Y EAL + TN+R ST +ISA + S++LGR+VH I
Sbjct: 164 NAMISGYVETGNYKEALELFK-EMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIA 222
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ + N +++ Y KCG +E A F + ++V+SW +I G + +A+
Sbjct: 223 DHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALL 282
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA--QNALIAM 180
L+ +ML+SG P T SI+ AC+ LG++ +GR +H ++ K G + + +LI M
Sbjct: 283 LFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 342
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y+K I A VF+ + K + +W +MI F+ G A F+ M +P++
Sbjct: 343 YSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRM-RKNEIKPDDIT 401
Query: 241 FGSVFSACS-----NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEM 290
F + SACS + R +F + +P L + +I + EA + S M
Sbjct: 402 FVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTM 461
Query: 291 RDRELLPDGLTVHSLLCAC 309
+ PDG+ SLL AC
Sbjct: 462 ---TMEPDGVIWCSLLKAC 477
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 171/571 (29%), Positives = 291/571 (50%), Gaps = 47/571 (8%)
Query: 38 YAGLISA---CSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
Y L+SA C+S + L+ G+ +H I Q ++VL ++ Y C A + F
Sbjct: 3 YVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQ 62
Query: 95 KMP-QRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGLGSV 152
+V W A+++ + N++ +A++L+ Q+ S V P +T+ ++KAC GLG V
Sbjct: 63 TNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRV 122
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
GR++H H++K+ + ++L+ MY K D+ +DA +F ++DV W ++I+ +
Sbjct: 123 IYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCY 182
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------- 251
K G AL F++M G ++PN F V S+C+
Sbjct: 183 FKDGKAEMALKTFDKMKELG-FEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLD 241
Query: 252 -------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
A+ +F +I + +WNA+I G + ++ + L M D
Sbjct: 242 AFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMND 301
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
P +T+ S++ A + L G +H YI++ D ++ + +++ Y KC + +
Sbjct: 302 EGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSS 361
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A +F+ + KN + VSWN +I+ + + ++ M +KPD +TF+ + AC+
Sbjct: 362 AETIFRTISKN-EVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACS 420
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
++A+L+ +LH I L + VM L+D+Y KCG + ARKLF+ + D+VSW+S
Sbjct: 421 QLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS 480
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
+I Y G EAL+LF M+ L V + VT + VL+ACSH GLV+EG + M +Y
Sbjct: 481 MIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQY 540
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
I P EH SC++DLL RAG +HEA + + +
Sbjct: 541 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQR 571
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 217/454 (47%), Gaps = 45/454 (9%)
Query: 24 FSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYG 81
F Q N N +RP TY ++ AC L + GR++H+H+L + DV + + ++NMY
Sbjct: 93 FDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYA 152
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
KC DA FD+ PQR+V W A+I+ ++ + A+K + +M + G P TF
Sbjct: 153 KCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTV 212
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
++ +C+ L ++ G+++H +I+ +AL+ MY K + A+ VF I RK+
Sbjct: 213 VVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKN 272
Query: 202 VTSWGSMIAAFSKLGYE---LEALCHFNE---------------------MLHHGAY--- 234
+W +MI +S G +E L N+ L HG +
Sbjct: 273 AITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHG 332
Query: 235 -----QPNEFIFGSV-----FSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANE 282
+ + IF V + C + A +F I ++ SWN +I+G N +
Sbjct: 333 YILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQ 392
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
A+ ++ M++ + PD LT S L AC L +G ++H II ++N V A+L
Sbjct: 393 ALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLD 452
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
MYAKC + A +F +L K D VSW S+I A H QA E RLF M ++ D +
Sbjct: 453 MYAKCGDVDEARKLFHQLPKR-DLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSV 511
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
TF V+ AC+ +V + + Y + + +D+
Sbjct: 512 TFLAVLSACSHAG---LVDEGYMYFNEMVVQYDI 542
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 179/386 (46%), Gaps = 43/386 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++S+C+ L +L+ G++VH ++ + D + + +++MYGKCG LE A+ F+K+
Sbjct: 209 TFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKI 268
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P++N ++W AMI G S I+L ++M G P T SII A S + G+
Sbjct: 269 PRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGK 328
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H +++++ + +LI Y K + A +F I++ +V SW MI+ +G
Sbjct: 329 FIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVG 388
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
++AL ++ M H +P+ F S SACS
Sbjct: 389 NHIQALHIYDNMKEHHV-KPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVM 447
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR LF+++ DL SW ++I SH A+EA+ LF EM+ +
Sbjct: 448 GALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVR 507
Query: 297 PDGLTVHSLLCACIGRLTLYQG-MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
D +T ++L AC + +G M + +++ + + ++ + + L A
Sbjct: 508 ADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYE 567
Query: 356 VFKELGKNADSVS-WNSIIAACLQHN 380
+ + + + +++ +ACL HN
Sbjct: 568 ILQRSKETRSDIGLLSTLFSACLLHN 593
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 182/345 (52%), Gaps = 12/345 (3%)
Query: 240 IFGSVFSACSNFA--RILFNEIDSP-DLASWNALIAGVASHSNANEAMSLFSEMR-DREL 295
+ G FS C ++A ++F D P D++ WNAL++ ++ EA+ LF ++ + +
Sbjct: 44 LIGFYFS-CHDYASAELVFQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYV 102
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD T +L AC G + G ++H++++K G +V V ++++ MYAKC +A+
Sbjct: 103 RPDFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIK 162
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F E + D WN++I+ + +AE + F +M +P+ +TF V+ +C ++
Sbjct: 163 LFDEFPQR-DVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLL 221
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+LE ++H + + + D FV++ L+D+Y KCG L A+++F + + ++W+++I
Sbjct: 222 NLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMIT 281
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYG 533
GY+ G ++L RM G P L+TL ++ A S + G +H Y I+ N
Sbjct: 282 GYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGY-ILRNRID 340
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ + ++D + G V AE ++ + ++V W +++
Sbjct: 341 VDIFID--VSLIDFYFKCGYVSSAETIFRTISKN-EVVSWNVMIS 382
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 147/282 (52%), Gaps = 3/282 (1%)
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D +T+ S L C L QG +H I GF SN+ + +++ Y C +A LVF
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM-LASQIKPDHITFNDVMGACAKMAS 416
+ D WN++++A + + E +LF ++ S ++PD T+ V+ AC +
Sbjct: 62 QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGR 121
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
+ ++H ++ KTGL +DVFV + LM++Y KC A KLF+ DV W+++I
Sbjct: 122 VIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISC 181
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y + G + ALK F +M+ LG PN VT V+++C+ + +E G ++R + E I+
Sbjct: 182 YFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHREL-IERRILL 240
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
S +VD+ + GC+ A++ ++ + + W +++
Sbjct: 241 DAFVLSALVDMYGKCGCLEMAKEVFEKIP-RKNAITWNAMIT 281
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 167/361 (46%), Gaps = 20/361 (5%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
N+ + T +I A S L+ G+ +H +IL ++ D+ + +++ Y KCG +
Sbjct: 300 NDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYV 359
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
A F + + VVSW MI+G A+ +Y M + V P TF S + AC
Sbjct: 360 SSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSAC 419
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
S L ++ GR+LH +I + ++ I AL+ MY K + +AR +F + ++D+ SW
Sbjct: 420 SQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWT 479
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEI-- 259
SMI A+ G EAL F+EM + + F +V SACS+ + FNE+
Sbjct: 480 SMIFAYGSHGQASEALRLFDEMQKLNV-RADSVTFLAVLSACSHAGLVDEGYMYFNEMVV 538
Query: 260 ---DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
P + ++ LI + +EA + R +E D + +L AC+
Sbjct: 539 QYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQ--RSKETRSDIGLLSTLFSACLLHNNFV 596
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILT-MYA---KCSVLCNALLVFKELG-KNADSVSWNS 371
G+Q+ +I++ D + P +L+ MYA K + KELG K + SW
Sbjct: 597 LGIQIGKMLIEV--DPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIE 654
Query: 372 I 372
I
Sbjct: 655 I 655
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 183/595 (30%), Positives = 289/595 (48%), Gaps = 52/595 (8%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHIL-------LSKCQP---DVVLQNHILNMYGK 82
I T ++ AC+ L +G+ VH + + L Q D L + ++ MY K
Sbjct: 303 ISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVK 362
Query: 83 CGSLEDARMGFDKMPQR-NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
CG + AR FD M + NV W ++ G ++ + +++ L++QM + G+ P +
Sbjct: 363 CGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISC 422
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
++K + L G H +++K G+ NALI+ Y K + I DA VF+ + R+D
Sbjct: 423 LLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQD 482
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHG----------------------------A 233
SW S+I+ S G EA+ F M G
Sbjct: 483 TISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHG 542
Query: 234 YQPNEFIFGS---------VFSACSNFARI--LFNEIDSPDLASWNALIAGVASHSNANE 282
Y + G ++S CS++ +F + ++ SW A+I ++
Sbjct: 543 YSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDK 602
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
L EM + PD V S L A G +L QG VH Y I+ G + +PV NA++
Sbjct: 603 VAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALME 662
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
MY KC + A L+F + N D +SWN++I ++N E F LFS ML Q +P+ +
Sbjct: 663 MYVKCRNVEEARLIFDRV-TNKDVISWNTLIGGYSRNNFPNESFSLFSDMLL-QFRPNAV 720
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
T ++ A A ++SLE ++H Y + G D + N L+D+Y+KCG+L AR LF+ +
Sbjct: 721 TMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRL 780
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
+++SW+ +I GY G G A+ LF +MR G+ P+ + +L AC H GL EG
Sbjct: 781 TKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGR 840
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
++ M+ EY I P +H +C+VDLL+R G + EA +FI M + D +W SLL
Sbjct: 841 RFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLL 895
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 161/602 (26%), Positives = 276/602 (45%), Gaps = 67/602 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQ----PDVVLQNHILNMYGKCGSLEDARMG 92
+Y ++ C RSL+ ++ H I S VL ++ Y KCG L +AR
Sbjct: 99 SYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTV 158
Query: 93 FDKMPQR--NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD MP + +V WT++++ ++ +A+ L+ QM GV P ++K S LG
Sbjct: 159 FDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLG 218
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
S+ G +H + K G NALIA+Y++ R+ DA VF + +D SW SMI
Sbjct: 219 SLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIG 278
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------- 251
G+ A+ F++M G + + SV AC+
Sbjct: 279 GCFSNGWHGTAVDLFSKMWSQGTEISSVTVL-SVLPACAGLGYGLIGKAVHGYSVKSGLL 337
Query: 252 ----------------ARILFNEIDSPDLAS----------------WNALIAGVASHSN 279
++++F + D+AS WN ++ G A
Sbjct: 338 WGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGE 397
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCN 338
E++SLF +M + + PD + LL CI L+ + G+ H YI+K+GF + VCN
Sbjct: 398 FEESLSLFVQMHELGIAPDEHAISCLL-KCITCLSCARDGLVAHGYIVKLGFGAQCAVCN 456
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
A+++ YAK +++ +A+LVF + + D++SWNS+I+ C + E LF RM +
Sbjct: 457 ALISFYAKSNMIGDAVLVFNRMPRQ-DTISWNSVISGCSSNGLNSEAIELFIRMWTQGQE 515
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
D +T V+ ACA+ +H Y KTGL + + N L+D+Y C S ++
Sbjct: 516 LDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQI 575
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
F M +VVSW+++I Y + G D+ L M G+ P++ + L A + +
Sbjct: 576 FRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESL 635
Query: 519 EEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
++G +H Y I ++P + ++++ + V EA +++ + D++ W +L
Sbjct: 636 KQGKSVHGYTIRNGMEKLLPV---ANALMEMYVKCRNVEEARLIFDRVT-NKDVISWNTL 691
Query: 577 LA 578
+
Sbjct: 692 IG 693
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 194/474 (40%), Gaps = 46/474 (9%)
Query: 1 FSNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDH 60
S + V S C N N + + T ++ AC+ R GR VH +
Sbjct: 484 ISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGY 543
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ + + L N +L+MY C + F M Q+NVVSWTAMI + +
Sbjct: 544 SVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKV 603
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
L +M+ G+ P F S + A +G S+ G+ +H + I++ L NAL+ M
Sbjct: 604 AGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEM 663
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K + +AR +F + KDV SW ++I +S+ + E+ F++ML ++PN
Sbjct: 664 YVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ--FRPNAVT 721
Query: 241 FGSVFSACSNF----------------------------------------ARILFNEID 260
+ A ++ AR+LF+ +
Sbjct: 722 MTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLT 781
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+L SW +IAG H A++LF +MR + PD + ++L AC +G +
Sbjct: 782 KKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRR 841
Query: 321 VHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+ K + + I+ + ++ L AL + + DS W S++ C H
Sbjct: 842 FFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIH 901
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGAC-AKMASLEMVTQLHCYITKTGL 432
+ ++ ++ +++P++ + ++ A+ E V +L I GL
Sbjct: 902 KNVKLAEKVADKVF--KLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGL 953
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 125/495 (25%), Positives = 205/495 (41%), Gaps = 61/495 (12%)
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEH----GSHLIAQNALIAMYTKFDRILDARNVFSGI 197
+++ C S+ ++ HA + S G + L+ Y K + +AR VF G+
Sbjct: 103 VVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTVFDGM 162
Query: 198 ARK--DVTSWGSMIAAFSKLGYELEALCHFNEML-------------------HHGAYQP 236
+ DV W S+++A++K G EA+ F +M G+
Sbjct: 163 PPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTE 222
Query: 237 NEFIFG------------------SVFSACSNF--ARILFNEIDSPDLASWNALIAGVAS 276
E I G +V+S C A +F+ + D SWN++I G S
Sbjct: 223 GEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFS 282
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK----MGFDS 332
+ A+ LFS+M + +TV S+L AC G G VH Y +K G DS
Sbjct: 283 NGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDS 342
Query: 333 ------NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+ + + ++ MY KC + +A VF + + WN I+ + + EE
Sbjct: 343 VQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESL 402
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
LF +M I PD + ++ ++ H YI K G V N L+ Y
Sbjct: 403 SLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFY 462
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
K +G A +FN M D +SW+S+I G + G EA++LF RM + G + VTL+
Sbjct: 463 AKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLL 522
Query: 507 GVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
VL AC+ G +H Y + + G+I + ++D+ + M
Sbjct: 523 SVLPACAQSRYWFAGRVVHGYSV---KTGLIGETSLANALLDMYSNCSDWQSTNQIFRSM 579
Query: 565 ACDADIVVWKSLLAS 579
++V W +++ S
Sbjct: 580 G-QKNVVSWTAMITS 593
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 169/565 (29%), Positives = 292/565 (51%), Gaps = 44/565 (7%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+ AC + +SL+ G+ +H ++ Q D+ L +++N+Y C + A+ FD M
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPC 68
Query: 101 VVS-WTAMIAGCSQNYQENDAIKLYIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGRQL 158
+S W ++AG ++NY +A++L+ ++L + P +T+ S++KAC GL LG+ +
Sbjct: 69 EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMI 128
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H ++K+ ++ ++L+ MY K + A +F+ + KDV W ++I+ + + G
Sbjct: 129 HTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------------ 254
EAL +F M G ++PN + S+C+ +
Sbjct: 189 KEALEYFGLMRRFG-FEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSA 247
Query: 255 ----------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
+F ++ + +WN++I+G ++ + LF M + + P
Sbjct: 248 LVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPT 307
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
T+ SL+ C L +G VH Y I+ S+V + ++++ +Y KC + A +FK
Sbjct: 308 LTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFK 367
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ K + VSWN +I+ + + E LFS M S ++PD ITF V+ AC+++A+LE
Sbjct: 368 LIPK-SKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALE 426
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
++H I + L + VM L+D+Y KCG++ A +F + D+VSW+S+I Y
Sbjct: 427 KGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYG 486
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
G AL+LF M + P+ VT + +L+AC H GLV+EG + + M N YGIIP
Sbjct: 487 SHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRV 546
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQ 563
EH SC++DLL RAG +HEA + + Q
Sbjct: 547 EHYSCLIDLLGRAGRLHEAYEILQQ 571
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 231/506 (45%), Gaps = 45/506 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ K +Y EAL ++ + ++ TY ++ AC L LG+ +H ++
Sbjct: 74 NGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCLV 133
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D+V+ + ++ MY KC + E A F++MP+++V W +I+ Q+ +A++
Sbjct: 134 KTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALE 193
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ M + G P T + I +C+ L + G ++H +I S +AL+ MY
Sbjct: 194 YFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYG 253
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + A VF + +K V +W SMI+ + G + + F M + G +P
Sbjct: 254 KCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGV-KPTLTTLS 312
Query: 243 SVFSACSNFARIL----------------------------------------FNEIDSP 262
S+ CS AR+L F I
Sbjct: 313 SLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKS 372
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+ SWN +I+G + EA+ LFSEMR + PD +T S+L AC L +G ++H
Sbjct: 373 KVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIH 432
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ II+ D+N V A+L MYAKC + A VFK L K D VSW S+I A H QA
Sbjct: 433 NLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKR-DLVSWTSMITAYGSHGQA 491
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNG 441
LF+ ML S +KPD +TF ++ AC + E + + G+ V +
Sbjct: 492 YVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSC 551
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDV 467
L+D+ + G L A ++ +NP++
Sbjct: 552 LIDLLGRAGRLHEAYEILQ--QNPEI 575
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 143/290 (49%), Gaps = 10/290 (3%)
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M R+LLP LL AC+ +L QG +H ++ +G +++ +C ++ +Y C +
Sbjct: 1 MDTRKLLP-------LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHL 53
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML-ASQIKPDHITFNDVM 408
+A VF + + WN ++A ++ E LF ++L +KPD T+ V+
Sbjct: 54 YDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVL 113
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
AC + + +H + KTGL D+ V + L+ +Y KC + A LFN M DV
Sbjct: 114 KACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVA 173
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
W+++I Y Q G EAL+ F MR G PN VT+ +++C+ + + G+ ++ +
Sbjct: 174 CWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEEL 233
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
N G + S +VD+ + G + A + QM +V W S+++
Sbjct: 234 INS-GFLLDSFISSALVDMYGKCGHLEMAIEVFEQMP-KKTVVAWNSMIS 281
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 149/292 (51%), Gaps = 13/292 (4%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
N ++ +T + LI CS L G+ VH + + ++ Q DV + + ++++Y KCG +E
Sbjct: 301 NEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVE 360
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
A F +P+ VVSW MI+G + +A+ L+ +M +S V P TF S++ ACS
Sbjct: 361 LAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACS 420
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
L ++ G ++H +I+ + ++ + AL+ MY K + +A +VF + ++D+ SW S
Sbjct: 421 QLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTS 480
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS- 261
MI A+ G AL F EML +P+ F ++ SAC + + FN++ +
Sbjct: 481 MITAYGSHGQAYVALELFAEMLQSNM-KPDRVTFLAILSACGHAGLVDEGCYYFNQMVNV 539
Query: 262 ----PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
P + ++ LI + +EA + + + E+ D + +L AC
Sbjct: 540 YGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQ--NPEIRDDVELLSTLFSAC 589
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 179/597 (29%), Positives = 306/597 (51%), Gaps = 51/597 (8%)
Query: 32 RIRPSTYAGLIS---ACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
+I P + L+ C+ +++ GR +H IL + + + N LN+Y K L
Sbjct: 5 KIFPPQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSH 64
Query: 89 ARMGFDKMPQ--RNVVSWTAMIAGCSQNYQEND---AIKLYIQMLQSG-VMPGQFTFGSI 142
A FD + ++ VSW ++I SQN+ + AI L+ +M+++ V+P T +
Sbjct: 65 ALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGV 124
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
A S L V G+Q H+ +K+ + ++L+ MY K + DAR +F + ++
Sbjct: 125 FSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNT 184
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA--------------- 247
SW +MI+ ++ +A+ F M Q NEF SV SA
Sbjct: 185 VSWATMISGYASSDIADKAVEVFELMRREEEIQ-NEFALTSVLSALTSDVFVYTGRQVHS 243
Query: 248 ------------CSNFARILFNEIDSPDLA-------------SWNALIAGVASHSNANE 282
+N ++ + S D A +W+A++ G A ++++
Sbjct: 244 LAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDK 303
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
A+ LF++M +LP T+ ++ AC + +G Q+HS+ K+GF + V +A++
Sbjct: 304 ALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVD 363
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
MYAKC L +A F E + D V W SII +Q+ E L+ +M ++ P+ +
Sbjct: 364 MYAKCGSLADARKGF-ECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNEL 422
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
T V+ AC+ +A+L+ Q+H I K G +V + + L +Y KCGSL +F M
Sbjct: 423 TMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRM 482
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
+ DV+SW+++I G +Q G G++AL+LF +M G+ P+ VT V +L+ACSH+GLV+ G
Sbjct: 483 PSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGW 542
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+++M +E+ I P EH +C+VD+L+RAG ++EA++FI D + +W+ LL +
Sbjct: 543 EYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGA 599
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 235/482 (48%), Gaps = 52/482 (10%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
N+ T AG+ SA S+L + G++ H + + C DV + + +LNMY K G + DA
Sbjct: 113 NVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDA 172
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD+MP+RN VSW MI+G + + + A++++ M + + +F S++ A +
Sbjct: 173 RKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSD 232
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
V GRQ+H+ IK+ + + NAL+ MY K + DA F K+ +W +M+
Sbjct: 233 VFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMV 292
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------ 251
+++ G +AL FN+M H P+EF V +ACS+
Sbjct: 293 TGYAQGGDSDKALKLFNKM-HSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGF 351
Query: 252 ----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
AR F + PD+ W ++I G + + ++L+ +
Sbjct: 352 GLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGK 411
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M+ ++P+ LT+ S+L AC L QG Q+H+ IIK GF VP+ +A+ MY KC
Sbjct: 412 MQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGS 471
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L + L+F + + D +SWN++I+ Q+ + LF +ML IKPD +TF +++
Sbjct: 472 LDDGYLIFWRM-PSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLS 530
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNG----LMDIYIKCGSLGSARKLFNFMENP 465
AC+ M +V + Y F++ M ++DI + G L A++ F+E+
Sbjct: 531 ACSHMG---LVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKE---FIESA 584
Query: 466 DV 467
V
Sbjct: 585 TV 586
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 163/344 (47%), Gaps = 42/344 (12%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S ++ ++A+ ++ + I+ ++SA +S + GR+VH + +
Sbjct: 191 ISGYASSDIADKAVEVFELMRREEEIQ-NEFALTSVLSALTSDVFVYTGRQVHSLAIKNG 249
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
V + N ++ MY KCGSL+DA F+ +N ++W+AM+ G +Q + A+KL+
Sbjct: 250 LLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFN 309
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M SGV+P +FT +I ACS L +V G+Q+H+ K G L +A++ MY K
Sbjct: 310 KMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCG 369
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ DAR F + + DV W S+I + + G L + +M PNE SV
Sbjct: 370 SLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVI-PNELTMASVL 428
Query: 246 SACSNFAR----------------------------------------ILFNEIDSPDLA 265
ACS+ A ++F + S D+
Sbjct: 429 RACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVI 488
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
SWNA+I+G++ + + N+A+ LF +M + PD +T +LL AC
Sbjct: 489 SWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSAC 532
>gi|224101423|ref|XP_002312273.1| predicted protein [Populus trichocarpa]
gi|222852093|gb|EEE89640.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 183/604 (30%), Positives = 300/604 (49%), Gaps = 46/604 (7%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
+ EA++ YD N +I + ++ AC+ + +G KVH I+ D ++
Sbjct: 80 FEEAILLYDKMLCN-EAQITSFVFPSVLRACAGFGDMFIGAKVHGRIIKCGFDNDPFIET 138
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
+L +YG+ G L DAR FD +P R++VSW+++I+ + N+A++++ ++ V
Sbjct: 139 SLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKGEANEALEMFRLLVNERVKL 198
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
S+ +ACS LG + L + +H ++++ + N+LI MY+ D + A +F
Sbjct: 199 DWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEALDNSLIEMYSSCDDLYSAERIF 258
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
+A K SW SMI +++ G+ EA F +ML +PN V +CS + +
Sbjct: 259 VNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELKV-EPNVITIMGVLKSCSGLSWL 317
Query: 255 -----------------------------------------LFNEIDSPDLASWNALIAG 273
+ I ++ SWN L++
Sbjct: 318 REGKLIHCYALKKGMTFQDDCLGPVLIELYAGCGKLGYCEKVLLAIGERNVVSWNTLLSI 377
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
A EA+ LF +M+ R L+ D ++ S + AC +L G Q+H Y IK
Sbjct: 378 NARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVGSLQLGRQIHGYAIKRCILGE 437
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
V NA++ MY++C +A ++F ++ K SV+WNSII+ +Q + E L +M
Sbjct: 438 F-VKNALIGMYSRCGFSDSAYMIFNDI-KQKSSVAWNSIISGFVQSGNSIEAIHLVDQMY 495
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
+ +K + F + ACA M LE LH + G+ D+++ L D+Y KCG L
Sbjct: 496 LNCLKITDVVFLSAIQACADMVCLEKGKWLHHKLIMYGVEKDLYIETALTDMYAKCGDLR 555
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
+A +F+ M VVSWS++I GY G D A+ F +M LG+ PN +T + +L+ACS
Sbjct: 556 TAEGVFHSMSEKSVVSWSAMISGYGMHGRIDAAITFFNQMVELGIKPNHITFMNILSACS 615
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
H G VE+G + +M ++G+ P+ EH +C+VDLL+RAG V+ A IN M AD V
Sbjct: 616 HSGSVEQGKFYFDLMR-DFGVEPSSEHFACLVDLLSRAGDVNGAYKIINSMPFPADASVL 674
Query: 574 KSLL 577
+LL
Sbjct: 675 GNLL 678
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 144/589 (24%), Positives = 266/589 (45%), Gaps = 59/589 (10%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+ Y L +C +LR L ++H H+ ++ ++ Y + GS++ + + F+
Sbjct: 2 TRYMPLFRSCKTLRQLN---QLHAHLSVTNLSNTAQASTKLIESYAQMGSIKSSTLVFET 58
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ W +I ++ +AI LY +ML + F F S+++AC+G G + +G
Sbjct: 59 YQNPDSFMWGVLIKCHVWSHAFEEAILLYDKMLCNEAQITSFVFPSVLRACAGFGDMFIG 118
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
++H +IK + + +L+ +Y + + DAR VF I +D+ SW S+I+++
Sbjct: 119 AKVHGRIIKCGFDNDPFIETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDK 178
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G EAL F +L + + + I SV ACS
Sbjct: 179 GEANEALEMF-RLLVNERVKLDWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEAL 237
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A +F + + SW ++I EA +F +M + ++
Sbjct: 238 DNSLIEMYSSCDDLYSAERIFVNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELKV 297
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF----DSNVPVCNAILTMYAKCSVLC 351
P+ +T+ +L +C G L +G +H Y +K G D PV ++ +YA C L
Sbjct: 298 EPNVITIMGVLKSCSGLSWLREGKLIHCYALKKGMTFQDDCLGPV---LIELYAGCGKLG 354
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
V +G+ + VSWN++++ + EE LF +M + D + + + AC
Sbjct: 355 YCEKVLLAIGER-NVVSWNTLLSINARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISAC 413
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ SL++ Q+H Y K + + FV N L+ +Y +CG SA +FN ++ V+W+
Sbjct: 414 GNVGSLQLGRQIHGYAIKRCILGE-FVKNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWN 472
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIME 529
S+I G+ Q G EA+ L +M + V + + AC+ + +E+G LH IM
Sbjct: 473 SIISGFVQSGNSIEAIHLVDQMYLNCLKITDVVFLSAIQACADMVCLEKGKWLHHKLIM- 531
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
YG+ + + D+ A+ G + AE + M+ + +V W ++++
Sbjct: 532 --YGVEKDLYIETALTDMYAKCGDLRTAEGVFHSMS-EKSVVSWSAMIS 577
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 129/521 (24%), Positives = 227/521 (43%), Gaps = 55/521 (10%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+SS + NEAL + N +++ + ACS L L+L + +H +I+ +
Sbjct: 172 ISSYVDKGEANEALEMFRLLVNE-RVKLDWVIMLSVTEACSKLGILKLAKSIHGYIVRRR 230
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
L N ++ MY C L A F M + +SWT+MI +++ +A ++++
Sbjct: 231 VDTCEALDNSLIEMYSSCDDLYSAERIFVNMANKTFISWTSMIYCYNRSGWFKEAFEIFV 290
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN-----ALIAM 180
+ML+ V P T ++K+CSGL + G+ +H + +K + Q+ LI +
Sbjct: 291 KMLELKVEPNVITIMGVLKSCSGLSWLREGKLIHCYALK----KGMTFQDDCLGPVLIEL 346
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y ++ V I ++V SW ++++ ++ G EAL F +M G + F
Sbjct: 347 YAGCGKLGYCEKVLLAIGERNVVSWNTLLSINARQGLFEEALVLFVQMQKRG-LMLDFFS 405
Query: 241 FGSVFSACSNF---------------------------------------ARILFNEIDS 261
S SAC N A ++FN+I
Sbjct: 406 LSSAISACGNVGSLQLGRQIHGYAIKRCILGEFVKNALIGMYSRCGFSDSAYMIFNDIKQ 465
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
+WN++I+G N+ EA+ L +M L + S + AC + L +G +
Sbjct: 466 KSSVAWNSIISGFVQSGNSIEAIHLVDQMYLNCLKITDVVFLSAIQACADMVCLEKGKWL 525
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H +I G + ++ + A+ MYAKC L A VF + + + VSW+++I+ H +
Sbjct: 526 HHKLIMYGVEKDLYIETALTDMYAKCGDLRTAEGVFHSMSEKS-VVSWSAMISGYGMHGR 584
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+ F++M+ IKP+HITF +++ AC+ S+E + G+
Sbjct: 585 IDAAITFFNQMVELGIKPNHITFMNILSACSHSGSVEQGKFYFDLMRDFGVEPSSEHFAC 644
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGC 482
L+D+ + G + A K+ N M P S +LG GC
Sbjct: 645 LVDLLSRAGDVNGAYKIINSMPFPADAS----VLGNLLNGC 681
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 131/250 (52%), Gaps = 7/250 (2%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S +Q L+ EALV + + + + + ISAC ++ SLQLGR++H + +
Sbjct: 372 NTLLSINARQGLFEEALVLF-VQMQKRGLMLDFFSLSSAISACGNVGSLQLGRQIHGYAI 430
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+C ++N ++ MY +CG + A M F+ + Q++ V+W ++I+G Q+ +AI
Sbjct: 431 -KRCILGEFVKNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNSIISGFVQSGNSIEAIH 489
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL--GRQLHAHVIKSEHGSHLIAQNALIAM 180
L QM + + F S I+AC+ + VCL G+ LH +I L + AL M
Sbjct: 490 LVDQMYLNCLKITDVVFLSAIQACADM--VCLEKGKWLHHKLIMYGVEKDLYIETALTDM 547
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K + A VF ++ K V SW +MI+ + G A+ FN+M+ G +PN
Sbjct: 548 YAKCGDLRTAEGVFHSMSEKSVVSWSAMISGYGMHGRIDAAITFFNQMVELGI-KPNHIT 606
Query: 241 FGSVFSACSN 250
F ++ SACS+
Sbjct: 607 FMNILSACSH 616
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 181/406 (44%), Gaps = 45/406 (11%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQ-PDVVLQNHIL 77
A++ +++ P+ T G++ +CS L L+ G+ +H + L D L ++
Sbjct: 285 AFEIFVKMLELKVEPNVITIMGVLKSCSGLSWLREGKLIHCYALKKGMTFQDDCLGPVLI 344
Query: 78 NMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQF 137
+Y CG L + +RNVVSW +++ ++ +A+ L++QM + G+M F
Sbjct: 345 ELYAGCGKLGYCEKVLLAIGERNVVSWNTLLSINARQGLFEEALVLFVQMQKRGLMLDFF 404
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
+ S I AC +GS+ LGRQ+H + IK + +NALI MY++ A +F+ I
Sbjct: 405 SLSSAISACGNVGSLQLGRQIHGYAIKRCILGEFV-KNALIGMYSRCGFSDSAYMIFNDI 463
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------ 251
+K +W S+I+ F + G +EA+ H + ++ + + +F S AC++
Sbjct: 464 KQKSSVAWNSIISGFVQSGNSIEAI-HLVDQMYLNCLKITDVVFLSAIQACADMVCLEKG 522
Query: 252 ----------------------------------ARILFNEIDSPDLASWNALIAGVASH 277
A +F+ + + SW+A+I+G H
Sbjct: 523 KWLHHKLIMYGVEKDLYIETALTDMYAKCGDLRTAEGVFHSMSEKSVVSWSAMISGYGMH 582
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
+ A++ F++M + + P+ +T ++L AC ++ QG + G + +
Sbjct: 583 GRIDAAITFFNQMVELGIKPNHITFMNILSACSHSGSVEQGKFYFDLMRDFGVEPSSEHF 642
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
++ + ++ + A + + AD+ +++ C H + +
Sbjct: 643 ACLVDLLSRAGDVNGAYKIINSMPFPADASVLGNLLNGCRIHQRMD 688
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 177/572 (30%), Positives = 287/572 (50%), Gaps = 49/572 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+ C ++ SL RK+H +++ D++ + ++++YG G +E AR+ FD++ +
Sbjct: 45 LLGICKTVSSL---RKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPD 101
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP-GQFTFGSIIKACSGLGSVCLGRQLH 159
+ SW MI N ++ ++ Y L+ + F ++KACS L GR+LH
Sbjct: 102 LYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLH 161
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
++K + L+ MY K + D+R VF I ++V W SMI + +
Sbjct: 162 CQIVKVGSPDSFVL-TGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLK 220
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------------- 254
E L FN M G + N++ GS+ +AC+ +
Sbjct: 221 EGLVLFNRM-REGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPL 279
Query: 255 ---------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
+F+E+ + DL SW A+I G A EA+ LF++ R ++LLP+
Sbjct: 280 LDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNT 339
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+T S+L AC +L G VH IK+G + NA++ MYAKC ++ +A VF+
Sbjct: 340 VTTSSVLSACAQTGSLNMGRSVHCLGIKLG-SEDATFENALVDMYAKCHMIGDARYVFET 398
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
+ + D ++WNSII+ Q+ A E LF +M + + PD IT V+ ACA + + +
Sbjct: 399 V-FDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRV 457
Query: 420 VTQLHCYITKTGL-AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
+ LH Y K GL + V+V L++ Y KCG SAR +F+ M + ++WS++I GY
Sbjct: 458 GSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYG 517
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
G +L+LF M + PN V +L+ACSH G++ EG + M Y +P+
Sbjct: 518 IQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSM 577
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
+H +C+VDLLARAG + EA DFI ++ D+
Sbjct: 578 KHYACMVDLLARAGRLEEALDFIEKIPIQPDV 609
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 205/415 (49%), Gaps = 43/415 (10%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
++ ++ ACS LR GRK+H I+ PD + +++MY KC +ED+R FD++
Sbjct: 141 FSIVLKACSELRETDEGRKLHCQIV-KVGSPDSFVLTGLVDMYAKCREVEDSRRVFDEIL 199
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
RNVV WT+MI G QN + + L+ +M + V Q+T GS++ AC+ LG++ G+
Sbjct: 200 DRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKW 259
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H +VIKS + L+ +Y K I DA +VF ++ D+ SW +MI +++ GY
Sbjct: 260 VHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGY 319
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------- 251
EAL F + PN SV SAC+
Sbjct: 320 PREALKLFTDE-RWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSEDATFENA 378
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
AR +F + D+ +WN++I+G + A EA+ LF +MR + PD
Sbjct: 379 LVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPD 438
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS-NVPVCNAILTMYAKCSVLCNALLVF 357
+T+ S+L AC G +H Y IK G S +V V A+L YAKC +A ++F
Sbjct: 439 AITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIF 498
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
E+G+ ++++W+++I LF ML +++P+ + F ++ AC+
Sbjct: 499 DEMGEK-NTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACS 552
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 177/332 (53%), Gaps = 14/332 (4%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP--DGLTVHSLLCAC 309
AR++F+ I +PDL SW +I + + +E + F R R+ L D + +L AC
Sbjct: 90 ARLMFDRIRNPDLYSWKVMIRWYFLNDSYSEIVQ-FYNTRLRKCLNEYDNVVFSIVLKAC 148
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSW 369
+G ++H I+K+G + V ++ MYAKC + ++ VF E+ + + V W
Sbjct: 149 SELRETDEGRKLHCQIVKVGSPDSF-VLTGLVDMYAKCREVEDSRRVFDEI-LDRNVVCW 206
Query: 370 NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
S+I +Q++ +E LF+RM ++ + T ++ AC K+ +L +H Y+ K
Sbjct: 207 TSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIK 266
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
+G + F++ L+D+Y KCG + A +F+ + D+VSW+++I+GYAQ G EALKL
Sbjct: 267 SGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKL 326
Query: 490 FTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCS---CVVD 546
FT R + PN VT VL+AC+ G + G ++ + GI E + +VD
Sbjct: 327 FTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCL-----GIKLGSEDATFENALVD 381
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ A+ + +A ++ + D D++ W S+++
Sbjct: 382 MYAKCHMIGDAR-YVFETVFDKDVIAWNSIIS 412
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 197/416 (47%), Gaps = 50/416 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T L++AC+ L +L G+ VH +++ S + L +L++Y KCG + DA FD++
Sbjct: 240 TLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDEL 299
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++VSWTAMI G +Q +A+KL+ ++P T S++ AC+ GS+ +GR
Sbjct: 300 STIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGR 359
Query: 157 QLHAHVIK--SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
+H IK SE + +NAL+ MY K I DAR VF + KDV +W S+I+ +++
Sbjct: 360 SVHCLGIKLGSEDATF---ENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQ 416
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------- 249
GY EAL F++M Y P+ SV SAC+
Sbjct: 417 NGYAYEALELFDQMRSDSVY-PDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSV 475
Query: 250 -------NF---------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
NF AR++F+E+ + +W+A+I G + + ++ LF +M
Sbjct: 476 YVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKE 535
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCN 352
+L P+ + ++L AC L +G + + + ++ F ++ ++ + A+ L
Sbjct: 536 KLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEE 595
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
AL +++ D + + C H++ + RML ++ PD + +M
Sbjct: 596 ALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRML--ELHPDKACYYVLM 649
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 184/600 (30%), Positives = 291/600 (48%), Gaps = 50/600 (8%)
Query: 24 FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
F +N+ T+ +I AC L ++ L + VH+ D+ + + ++ +Y
Sbjct: 166 FRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDN 225
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G + DA+ FD++P R+ + W M+ G +N N A+ + +M S V P +F ++
Sbjct: 226 GYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLL 285
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
C+ G V G QLH VI+S S N +I MY+K + DAR +F + + D
Sbjct: 286 SVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTV 345
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHG---------AYQPN----------------- 237
+W +IA + + G+ EA+ F M+ G ++ P+
Sbjct: 346 TWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYI 405
Query: 238 ------------------EFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSN 279
F G V AC F + N + D+A A+I+G +
Sbjct: 406 VRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQ---NTL--VDVAVCTAMISGYVLNGL 460
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
EA++LF + ++P+ LT+ S+L AC +L G ++H I+K G ++ V ++
Sbjct: 461 NVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSS 520
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
I MYAK L A F+ + DSV WN +I + Q+ + E LF +M S K
Sbjct: 521 ITYMYAKSGRLDLAYQFFRRMPVK-DSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKF 579
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D ++ + + ACA +L +LHC++ + D FV + L+D+Y KCG L AR +F
Sbjct: 580 DSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVF 639
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ M+ + VSW+S+I Y G E L LF M G+ P+ VT + +++AC H GLV+
Sbjct: 640 DMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVD 699
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EG++ +R M EYGI EH +C+VDL RAG +HEA D I M D W SLL +
Sbjct: 700 EGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGA 759
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 138/514 (26%), Positives = 232/514 (45%), Gaps = 49/514 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N YV K +N AL + N+ ++ ++ L+S C++ ++ G ++H ++
Sbjct: 251 NGYV----KNGDFNSALGTFQ-EMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVI 305
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S + D + N I+ MY KCG+L DAR FD MPQ + V+W +IAG QN ++A+
Sbjct: 306 RSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVA 365
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ M+ SGV TF S + + GS+ +++H+++++ + ++AL+ +Y
Sbjct: 366 LFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYF 425
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + A F DV +MI+ + G +EAL F ++ G PN
Sbjct: 426 KGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMV-PNCLTMA 484
Query: 243 SVFSACSNFARI----------------------------------------LFNEIDSP 262
SV AC+ A + F +
Sbjct: 485 SVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVK 544
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D WN +I + + A+ LF +M D +++ + L AC LY G ++H
Sbjct: 545 DSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELH 604
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
++++ F S+ V + ++ MY+KC L A VF ++ + VSWNSIIAA H +
Sbjct: 605 CFVVRNSFISDTFVASTLIDMYSKCGKLALARSVF-DMMDWKNEVSWNSIIAAYGNHGRP 663
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNG 441
E LF M+ + I+PDH+TF +M AC + E + C + G+ +
Sbjct: 664 RECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFAC 723
Query: 442 LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+Y + G L A M PD +W SL+
Sbjct: 724 MVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLL 757
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 161/614 (26%), Positives = 278/614 (45%), Gaps = 62/614 (10%)
Query: 9 LCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQP 68
L K L+ E+L A Q + R P++ A L+ Q R++H +L+
Sbjct: 62 LSKSRLFEESLAA----QLESMFRAFPNSDASLVK--------QQVRQIHAKVLVCGMNG 109
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
+ L + +L MY C S +D F ++ + W +I G S + A+ + +ML
Sbjct: 110 SLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRML 169
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH--LIAQNALIAMYTKFDR 186
S V P ++TF +IKAC GL +V L + +H + G H L ++LI +YT
Sbjct: 170 GSNVAPDKYTFPYVIKACGGLNNVPLCKMVHE--LARSMGFHMDLFIGSSLIKLYTDNGY 227
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG---- 242
I DA+ +F + +D W M+ + K G AL F EM + +PN F
Sbjct: 228 IHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEM-RNSCVKPNSVSFVCLLS 286
Query: 243 ----------------------------------SVFSACSNF--ARILFNEIDSPDLAS 266
+++S C N AR +F+ + D +
Sbjct: 287 VCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVT 346
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WN LIAG + +EA++LF M + D +T S L + + +L +VHSYI+
Sbjct: 347 WNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIV 406
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+ G +V + +A++ +Y K + A F++ D ++I+ + + E
Sbjct: 407 RHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQ-NTLVDVAVCTAMISGYVLNGLNVEAL 465
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
LF ++ + P+ +T V+ ACA +ASL++ +LHC I K GL V + + +Y
Sbjct: 466 NLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMY 525
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
K G L A + F M D V W+ +I+ ++Q G + A+ LF +M + G + V+L
Sbjct: 526 AKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLS 585
Query: 507 GVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
L+AC++ + G L+ ++ N + I S ++D+ ++ G + A + M
Sbjct: 586 ATLSACANYPALYYGKELHCFVVRNSF--ISDTFVASTLIDMYSKCGKLALARSVFDMMD 643
Query: 566 CDADIVVWKSLLAS 579
+ V W S++A+
Sbjct: 644 WKNE-VSWNSIIAA 656
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 193/431 (44%), Gaps = 44/431 (10%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN + + VA + + +++ T+A + + SL+ ++VH +I+ DV
Sbjct: 356 QNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVY 415
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
L++ ++++Y K G +E A F + +V TAMI+G N +A+ L+ ++Q G
Sbjct: 416 LKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEG 475
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
++P T S++ AC+ L S+ LG++LH ++K + +++ MY K R+ A
Sbjct: 476 MVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAY 535
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF 251
F + KD W MI +FS+ G A+ F +M G + + + SAC+N+
Sbjct: 536 QFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGT-KFDSVSLSATLSACANY 594
Query: 252 ----------------------------------------ARILFNEIDSPDLASWNALI 271
AR +F+ +D + SWN++I
Sbjct: 595 PALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSII 654
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGF 330
A +H E + LF EM + + PD +T ++ AC + +G+ + + G
Sbjct: 655 AAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGI 714
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+ + ++ +Y + L A K + D+ +W S++ AC H EL +L S
Sbjct: 715 CARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNV-ELAKLAS 773
Query: 391 RMLASQIKPDH 401
+ L ++ P++
Sbjct: 774 KHLV-ELDPNN 783
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 184/591 (31%), Positives = 296/591 (50%), Gaps = 50/591 (8%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHI----LLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+ Y L+ C+S +S+ +++H H LLS +L + + Y CG AR
Sbjct: 19 ARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSS-LAAAYAMCGCAPHARK 77
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLG 150
FD++ ++ SW AMI + + DA+ L++QML SG P +T+ +IKAC
Sbjct: 78 LFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYL 137
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+G +HA + S S QN+L+AMY + AR VF + + + SW +MI
Sbjct: 138 LPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMIN 197
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------- 249
+ K G EAL F+ M+ G +P+ SV CS
Sbjct: 198 GYFKNGCVKEALMVFDWMIGKG-IEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLG 256
Query: 250 -------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ A+++F E+D D+ SW ++ G + +A A+ L M
Sbjct: 257 EDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMM 316
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ + P+ +T+ S+L AC +L G +H + I+ +S V V A++ MYAKC+ +
Sbjct: 317 QFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNV 376
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
+ VF + K + WN+II+ C+ + + + LF +ML + P+ T N ++ A
Sbjct: 377 NLSFRVFSKXSKQ-RTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPA 435
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM--ENPDVV 468
A + L+ +H Y+ ++G + V L+DIY KCGSL SA +FN + ++ D++
Sbjct: 436 YAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDII 495
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
+WS++I GY G G+ A+ LF +M GV PN +T +L ACSH GLV+EGL L++ M
Sbjct: 496 TWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFM 555
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + +H +CV+DLL RAG + EA + I MA + VW +LL S
Sbjct: 556 LEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGS 606
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 156/590 (26%), Positives = 264/590 (44%), Gaps = 80/590 (13%)
Query: 14 LYNEALVAYD----FSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQ 67
+Y + ++YD F Q + R P TY +I AC ++G +H ++S
Sbjct: 96 MYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFD 155
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
D +QN ++ MY CG +E AR FD M +R +VSW MI G +N +A+ ++ M
Sbjct: 156 SDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWM 215
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
+ G+ P T S++ CS L + +GR++HA V G + N+L+ MY K +
Sbjct: 216 IGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNM 275
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
+A+ +F + ++DV SW +M+ + G AL +M+ + +PN SV SA
Sbjct: 276 DEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALL-LCQMMQFESVKPNFVTLASVLSA 334
Query: 248 CS----------------------------------------NFARILFNEIDSPDLASW 267
C+ N + +F++ A W
Sbjct: 335 CASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPW 394
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
NA+I+G + + +A+ LF +M + P+ T++SLL A L Q +H Y+I+
Sbjct: 395 NAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIR 454
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL-GKNADSVSWNSIIAACLQHNQAEELF 386
GF S + V ++ +Y+KC L +A +F + K+ D ++W++IIA H E
Sbjct: 455 SGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAI 514
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG----- 441
LF +M+ S +KP+ ITF ++ AC+ H + GL F++
Sbjct: 515 SLFDQMVQSGVKPNEITFTSILHACS-----------HAGLVDEGLGLFKFMLEDNQMSL 563
Query: 442 -------LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI---LGYAQFGCGDEALKLF 490
++D+ + G L A +L M P+ W +L+ + + G+ A K
Sbjct: 564 RTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWL 623
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
+ G + N V L + +A VG + H+ R+M N G+ T H
Sbjct: 624 FELEP-GNTGNYVLLANIYSA---VGRWRDAEHV-RLMMNNIGLRKTPAH 668
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 198/427 (46%), Gaps = 51/427 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ K EAL+ +D+ I +T ++ CS L+ L++GR+VH +
Sbjct: 193 NTMINGYFKNGCVKEALMVFDW-MIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVE 251
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D+ + N +L+MY KCG++++A+M F +M +R+VVSWT M+ G N A+
Sbjct: 252 VKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSAL- 310
Query: 123 LYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
L QM+Q V P T S++ AC+ L S+ GR LH I+ + S +I + ALI MY
Sbjct: 311 LLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMY 370
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K + + + VFS +++ W ++I+ G +A+ F +ML A PN+
Sbjct: 371 AKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLME-AVDPNDATL 429
Query: 242 GS--------------------------------------VFSACSNF--ARILFNEI-- 259
S ++S C + A +FN I
Sbjct: 430 NSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPK 489
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
D+ +W+A+IAG H + A+SLF +M + P+ +T S+L AC + +G+
Sbjct: 490 KDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGL 549
Query: 320 QVHSYII---KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+ +++ +M ++ C ++ + + L A + + + + W +++ +C
Sbjct: 550 GLFKFMLEDNQMSLRTDHYTC--VIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSC 607
Query: 377 LQHNQAE 383
+ H E
Sbjct: 608 VIHENVE 614
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 150/292 (51%), Gaps = 9/292 (3%)
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT----MYAK 346
+ + LL SLL C R ++ Q+H++ I +G S+ P + +L+ YA
Sbjct: 10 KSKHLLTATARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSS-PYSHHLLSSLAAAYAM 68
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK-PDHITFN 405
C +A +F EL +N SWN++I + + LF +MLAS + PD+ T+
Sbjct: 69 CGCAPHARKLFDEL-RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYP 127
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
V+ AC EM +H +G D FV N LM +Y+ CG + AR++F+ M
Sbjct: 128 FVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRER 187
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
+VSW+++I GY + GC EAL +F M G+ P+ T+V VL CS++ +E G ++
Sbjct: 188 TLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVH 247
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
++E + + + ++D+ A+ G + EA+ +M D+V W +++
Sbjct: 248 ALVEVK-NLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMD-KRDVVSWTTMM 297
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 171/550 (31%), Positives = 282/550 (51%), Gaps = 43/550 (7%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM- 127
D+ N+ L + K L+DAR FD++PQR+ VSWT +I+G + ++A++L+ +M
Sbjct: 48 DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107
Query: 128 LQSGVMPGQFTFGSIIKACSGLG-SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
LQS + F +K C GLG + G LH +K+ + + +AL+ MY K
Sbjct: 108 LQSELRIDPFLLSLGLKTC-GLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGE 166
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM------------------ 228
I + VF + ++ +W ++I + GY L +F+ M
Sbjct: 167 IGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKA 226
Query: 229 ------LHHG----------AYQPNEFIFGSV---FSACS--NFARILFNEIDSPDLASW 267
L+HG + N F+ S+ ++ C ++ F ++ + D+ SW
Sbjct: 227 SADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSW 286
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
++ + + F MR ++P+ T +++ C L G Q+H++++
Sbjct: 287 TTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLC 346
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
+GF + + V N+I+T+Y+KC L + VF + K D ++W++IIAA Q EE F
Sbjct: 347 VGFVNALSVANSIMTLYSKCGELASVSKVFCSM-KFRDIITWSTIIAAYSQVGYGEEAFE 405
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
SRM + KP+ V+ C MA LE QLH ++ GL V + L+ +Y
Sbjct: 406 YLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYA 465
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
KCGS+ A K+F D++SW+++I GYA+ G EA++LF ++ +G+ P+ VT +G
Sbjct: 466 KCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIG 525
Query: 508 VLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
VLTACSH G+V+ G + + M +Y I P++EH C++DLL RAG +H+AE I M
Sbjct: 526 VLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQ 585
Query: 568 ADIVVWKSLL 577
D VVW +LL
Sbjct: 586 WDDVVWSTLL 595
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/523 (24%), Positives = 222/523 (42%), Gaps = 61/523 (11%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
+EAL + + + +RI P + + C + G +H + + V + +
Sbjct: 97 SEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSA 156
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
+L+MY K G + + FD+MP RN V+WTA+I G + + + M +S V
Sbjct: 157 LLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYD 216
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
+ + +KA + G++ GR +H +K + N+L MY K ++ + F
Sbjct: 217 SYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFR 276
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL 255
+ DV SW +++ A+ ++G E L F M PNE+ F +V S C+NFAR+
Sbjct: 277 KMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVI-PNEYTFSAVISCCANFARLK 335
Query: 256 FNE----------------------------------------IDSPDLASWNALIAGVA 275
+ E + D+ +W+ +IA +
Sbjct: 336 WGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYS 395
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
EA S MR P+ + S+L C L QG Q+H++++ +G +
Sbjct: 396 QVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSM 455
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
VC+A++ MYAKC + A +F + K+ D +SW ++I+ +H ++E LF +
Sbjct: 456 VCSALIIMYAKCGSIAEASKIFMDSWKD-DIISWTAMISGYAEHGHSQEAIELFENIQKV 514
Query: 396 QIKPDHITFNDVMGAC--AKMASL------EMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
++PD +TF V+ AC A M L M H +K ++D+
Sbjct: 515 GLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGC-------MIDLLC 567
Query: 448 KCGSLGSARKLFNFME-NPDVVSWSSLILG---YAQFGCGDEA 486
+ G L A L M D V WS+L+ + CG A
Sbjct: 568 RAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRA 610
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 200/455 (43%), Gaps = 70/455 (15%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
Y+EA +AY + + YA + A + +L GR +H L + + N
Sbjct: 197 YSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVAN 256
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
+ MY KCG L+ F KM +VVSWT ++ Q +E+ ++ + +M S V+P
Sbjct: 257 SLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIP 316
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
++TF ++I C+ + G QLHAHV+ + L N+++ +Y+K + VF
Sbjct: 317 NEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVF 376
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
+ +D+ +W ++IAA+S++GY EA + + M G +PNEF SV S C + A +
Sbjct: 377 CSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGP-KPNEFALASVLSVCGSMAIL 435
Query: 255 ----------------------------------------LFNEIDSPDLASWNALIAGV 274
+F + D+ SW A+I+G
Sbjct: 436 EQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGY 495
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF---- 330
A H ++ EA+ LF ++ L PD +T +L AC H+ ++ +GF
Sbjct: 496 AEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTAC-----------SHAGMVDLGFYYFN 544
Query: 331 ----DSNVPVCNA----ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
D ++ ++ + + L +A + + + D V W++++ AC H
Sbjct: 545 SMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDV 604
Query: 383 EELFRLFSRMLASQIKPD----HITFNDVMGACAK 413
+ R + +L ++ P+ HIT ++ A K
Sbjct: 605 DCGQRAAAEVL--KLDPNCAGTHITLANIFAAKGK 637
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 173/386 (44%), Gaps = 28/386 (7%)
Query: 29 TNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
+N+ T++ +IS C++ L+ G ++H H+L + + N I+ +Y KCG L
Sbjct: 312 SNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELAS 371
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
F M R++++W+ +IA SQ +A + +M G P +F S++ C
Sbjct: 372 VSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGS 431
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+ + G+QLHAHV+ + +ALI MY K I +A +F + D+ SW +M
Sbjct: 432 MAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAM 491
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEID--- 260
I+ +++ G+ EA+ F E + +P+ F V +ACS+ + FN +
Sbjct: 492 ISGYAEHGHSQEAIELF-ENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDY 550
Query: 261 --SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+P + +I + ++A +L +R + D + +LL AC + G
Sbjct: 551 HITPSKEHYGCMIDLLCRAGRLHDAETL---IRSMPIQWDDVVWSTLLRACRIHGDVDCG 607
Query: 319 MQVHSYIIKMGFD--------SNVPVCNAILTMYAKCSVLCNALLVFKELG----KNADS 366
+ + ++K+ + +N+ A +L + V KE G K DS
Sbjct: 608 QRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDS 667
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRM 392
V + ++ H Q E+++ + +
Sbjct: 668 VF--AFVSGDRSHPQGEDIYNILEEL 691
>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 184/615 (29%), Positives = 307/615 (49%), Gaps = 46/615 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS L Q +++ L Y S T+ ++ T+ L AC++L G +H ++
Sbjct: 18 NSLVSRLSYQGAHHQVLQTY-ISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVV 76
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ D + + +++ Y K G + R FD M +RNVV WT +I S+ + A
Sbjct: 77 VNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFS 136
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ QM +SG+ P T S++ G+ + L LH +I S L N+++ MY
Sbjct: 137 MFKQMRESGIQPTSVTLLSLL---PGISKLPLLLCLHCLIILHGFESDLALSNSMVNMYG 193
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K RI DAR +F I +D+ SW S+++A+SK+G E + + + +P++ F
Sbjct: 194 KCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIG-ATEEILQLLQAMKIEDIKPDKQTFC 252
Query: 243 SVFSA----------------------------------------CSNFARILFNEIDSP 262
S SA C + A +F
Sbjct: 253 SALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEK 312
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ W A+I+G+ + A++A+ +F +M + + P T+ S L AC G +H
Sbjct: 313 DVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIH 372
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
Y+++ G ++P N+++TMYAKC+ L + +F ++ + D VSWN+I+A ++
Sbjct: 373 GYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEK-DLVSWNAIVAGHAKNGYL 431
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
+ F+ M S ++PD IT ++ AC +L +H ++ ++ L + L
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 491
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y KCG+L +A+K F+ M D+V+WS+LI+GY G G+ AL+ ++ G+ PN
Sbjct: 492 VDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNH 551
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
V + VL+ACSH GL+ +GL +Y M ++ + P EH +CVVDLL+RAG V EA F
Sbjct: 552 VIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYK 611
Query: 563 QMACDADIVVWKSLL 577
M + IVV LL
Sbjct: 612 MMFKEPSIVVLGMLL 626
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/514 (25%), Positives = 238/514 (46%), Gaps = 45/514 (8%)
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
S+ ++++ S + ++ YI M ++ +TF S+ KAC+ L G LH V
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 163 IKS--EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+ + H S++ ++LI+ Y KF I R VF + +++V W ++I ++S+ G
Sbjct: 76 VVNGLSHDSYI--GSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDI 133
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------------- 251
A F +M G QP S+ S
Sbjct: 134 AFSMFKQMRESGI-QPTSVTLLSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMVNMY 192
Query: 252 --------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
AR LF ID D+ SWN+L++ + E + L M+ ++ PD T
Sbjct: 193 GKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFC 252
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
S L A + L G VH ++K G + + V +A++ +Y +C L A VFK +
Sbjct: 253 SALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEK 312
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
D V W ++I+ +Q++ A++ +F +M+ S +KP T + ACA++ ++ +
Sbjct: 313 -DVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASI 371
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H Y+ + G+ D+ N L+ +Y KC L + +FN M D+VSW++++ G+A+ G
Sbjct: 372 HGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYL 431
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
+ + F MR + P+ +T+ +L AC G + +G ++ + +IP +
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRS-SLIPCIMTETA 490
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+VD+ + G + A+ + M D+V W +L+
Sbjct: 491 LVDMYFKCGNLENAQKCFDCM-LQRDLVAWSTLI 523
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 201/445 (45%), Gaps = 45/445 (10%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
+I+ T+ +SA + L+LG+ VH +L D +++ ++ +Y +C L+ A
Sbjct: 243 DIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPA 302
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F +++VV WTAMI+G QN + A+ ++ QM++S V P T S + AC+ L
Sbjct: 303 YKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQL 362
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G +G +H +V++ + AQN+L+ MY K +++ + ++F+ + KD+ SW +++
Sbjct: 363 GCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIV 422
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------NF------ 251
A +K GY + + FNEM +P+ S+ AC NF
Sbjct: 423 AGHAKNGYLSKGIFFFNEM-RKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSL 481
Query: 252 ----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
A+ F+ + DL +W+ LI G + A+ +SE
Sbjct: 482 IPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSE 541
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCS 348
+ P+ + S+L AC + +G+ ++ + K N+ ++ + ++
Sbjct: 542 FLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAG 601
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP-DHITFNDV 407
+ A +K + K V ++ AC + N EL ++ +R + ++KP D F +
Sbjct: 602 KVDEAYSFYKMMFKEPSIVVLGMLLDAC-RVNGRVELGKVIARDMF-ELKPVDPGNFVQL 659
Query: 408 MGACAKMASLEMVTQLHCYITKTGL 432
+ A M+ + V + + GL
Sbjct: 660 ANSYASMSRWDGVEKAWTQMRSLGL 684
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 5/212 (2%)
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
S+NS+++ ++ + + M + + D TF + AC + LH +
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
GL+ D ++ + L+ Y K G + RK+F+ M +VV W+++I Y++ G D A
Sbjct: 76 VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
+F +MR G+ P VTL+ +L S + L+ L + E + + +V++
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIILHGFESDLALSNS----MVNM 191
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ G + +A + C DIV W SLL++
Sbjct: 192 YGKCGRIADARRLFQSIDC-RDIVSWNSLLSA 222
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 175/584 (29%), Positives = 284/584 (48%), Gaps = 44/584 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ AC L+S+++G+ VH+ + L + DV + + ++ +Y + G L DA+ FD +
Sbjct: 60 TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
PQ++ V W M+ G +N +AIK++++M S + P TF ++ C+ + LG
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
QLH + N L+AMY+K + AR +F + D+ SW +I+ + + G
Sbjct: 180 QLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNG 239
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-------------------------- 250
EA F M+ G +P+ F S F C N
Sbjct: 240 LMGEAEHLFRGMISAGI-KPDSITFAS-FLPCVNELLSLKHCKEIHGYIIRHAVVLDVFL 297
Query: 251 ---------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A+ + + S D +I+G + EA+ F + +
Sbjct: 298 KSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERM 357
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P +T S+ A G L G ++H IIK D V +AIL MYAKC L A
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF + + D++ WNS+I +C Q+ + E LF +M + D ++ + + ACA +
Sbjct: 418 VFNRITEK-DAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLP 476
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+L ++H + K L D++ + L+D+Y KCG+L +R++F+ M+ + VSW+S+I
Sbjct: 477 ALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIIS 536
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
Y G E L LF M G+ P+ VT +G+++AC H G V+EG+ Y +M EYGI
Sbjct: 537 AYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIP 596
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH +CV D+ RAG + EA + IN M D VW +LL +
Sbjct: 597 ARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGA 640
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/544 (27%), Positives = 260/544 (47%), Gaps = 50/544 (9%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MY + GSL+DA+ F + +W MI G + Q N A+ Y++ML +GV P ++T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
F ++KAC GL SV +G+ +H V + ++LI +Y + + DA+ +F I
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFN- 257
+KD W M+ + K G A+ F EM H +PN F V S C++ A +
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEM-RHSEIKPNSVTFACVLSVCASEAMLDLGT 179
Query: 258 -----------EIDSP----------------------------DLASWNALIAGVASHS 278
E+DSP DL SWN +I+G +
Sbjct: 180 QLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNG 239
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
EA LF M + PD +T S L L+L ++H YII+ +V + +
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
A++ +Y KC + A + + + D+V ++I+ + + + +E F ++ ++K
Sbjct: 300 ALIDIYFKCRDVEMAQKILCQ-SSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMK 358
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
P +TF+ + A A +A+L + +LH I KT L V + ++D+Y KCG L A ++
Sbjct: 359 PTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRV 418
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
FN + D + W+S+I +Q G EA+ LF +M G + V++ G L+AC+++ +
Sbjct: 419 FNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPAL 478
Query: 519 EEGLHLYRIMENEYGIIPTREHC---SCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
G ++ +M P R S ++D+ A+ G ++ + ++M + + V W S
Sbjct: 479 HYGKEIHGLMIKG----PLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQ-ERNEVSWNS 533
Query: 576 LLAS 579
++++
Sbjct: 534 IISA 537
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 221/489 (45%), Gaps = 44/489 (8%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
++ I+ T+A ++S C+S L LG ++H + + D + N +L MY KC L+
Sbjct: 152 HSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQ 211
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
AR FD PQ ++VSW +I+G QN +A L+ M+ +G+ P TF S + +
Sbjct: 212 AARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVN 271
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
L S+ +++H ++I+ + ++ALI +Y K + A+ + + D +
Sbjct: 272 ELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTT 331
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------- 254
MI+ + G EAL F ++ +P F S+F A + A +
Sbjct: 332 MISGYVLNGKNKEALEAFRWLVQE-RMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKT 390
Query: 255 ---------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
+FN I D WN++I + + EA++LF
Sbjct: 391 KLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLF 450
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
+M D +++ L AC L+ G ++H +IK S++ ++++ MYAKC
Sbjct: 451 RQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKC 510
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
L + VF + + + VSWNSII+A H +E LF ML + I+PDH+TF +
Sbjct: 511 GNLNFSRRVFDRM-QERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGI 569
Query: 408 MGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NP 465
+ AC + E + H + G+ + + D++ + G L A + N M P
Sbjct: 570 ISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPP 629
Query: 466 DVVSWSSLI 474
D W +L+
Sbjct: 630 DAGVWGTLL 638
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 178/393 (45%), Gaps = 42/393 (10%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+P T+A + + L SL+ +++H +I+ DV L++ ++++Y KC +E A+
Sbjct: 256 IKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQ 315
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ + V T MI+G N + +A++ + ++Q + P TF SI A +GL
Sbjct: 316 KILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLA 375
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ LG++LH +IK++ +A++ MY K R+ A VF+ I KD W SMI
Sbjct: 376 ALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMIT 435
Query: 211 AFSKLGYELEALCHFNEM------------------------LHHGAYQPNEFIFGSV-- 244
+ S+ G EA+ F +M LH+G I G +
Sbjct: 436 SCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRS 495
Query: 245 -----------FSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
++ C NF+R +F+ + + SWN++I+ +H + E ++LF EM
Sbjct: 496 DLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEML 555
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ PD +T ++ AC + +G++ H + G + + + M+ + L
Sbjct: 556 RNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRL 615
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
A + D+ W +++ AC H E
Sbjct: 616 DEAFETINSMPFPPDAGVWGTLLGACHIHGNVE 648
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 174/580 (30%), Positives = 298/580 (51%), Gaps = 45/580 (7%)
Query: 33 IRPSTYAGLISACS-SLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+ S L+ C+ S +SL+ + VH IL + DVVL ++N+Y C AR
Sbjct: 1 MESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARH 60
Query: 92 GFDKMPQR-NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV-MPGQFTFGSIIKACSGL 149
F+ R +V W ++++G S+N +D ++++ ++L + +P FTF ++IKA L
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G LGR +H V+KS + ++ ++L+ MY KF+ ++ VF + +DV SW ++I
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------ 251
+ F + G +AL F M G ++PN SACS
Sbjct: 181 SCFYQSGEAEKALELFGRMESSG-FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGF 239
Query: 252 ----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
AR +F ++ L +WN++I G + ++ + + +
Sbjct: 240 ELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNR 299
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M P T+ S+L AC L G +H Y+I+ ++++ V +++ +Y KC
Sbjct: 300 MIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
A VF + K+ + SWN +I++ + + ++ +M++ +KPD +TF V+
Sbjct: 360 ANLAETVFSKTQKDV-AESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLP 418
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
AC+++A+LE Q+H I+++ L D +++ L+D+Y KCG+ A ++FN + DVVS
Sbjct: 419 ACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS 478
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+ +I Y G EAL F M+ G+ P+ VTL+ VL+AC H GL++EGL + M
Sbjct: 479 WTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMR 538
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
++YGI P EH SC++D+L RAG + EA + I Q +D
Sbjct: 539 SKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSD 578
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/509 (25%), Positives = 224/509 (44%), Gaps = 51/509 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S K +++++ L + N + T+ +I A +L LGR +H ++
Sbjct: 75 NSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVV 134
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S DVV+ + ++ MY K E++ FD+MP+R+V SW +I+ Q+ + A++
Sbjct: 135 KSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALE 194
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ +M SG P + I ACS L + G+++H +K +AL+ MY
Sbjct: 195 LFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYG 254
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K D + AR VF + RK + +W SMI + G + N M+ G +P++
Sbjct: 255 KCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT-RPSQTTLT 313
Query: 243 SVFSACS----------------------------------------NFARILFNEIDSP 262
S+ ACS N A +F++
Sbjct: 314 SILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD 373
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
SWN +I+ S N +A+ ++ +M + PD +T S+L AC L +G Q+H
Sbjct: 374 VAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIH 433
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
I + +++ + +A+L MY+KC A +F + K D VSW +I+A H Q
Sbjct: 434 LSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK-DVVSWTVMISAYGSHGQP 492
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMA----SLEMVTQLHCYITKTGLAFDVFV 438
E F M +KPD +T V+ AC L+ +Q+ +K G+ +
Sbjct: 493 REALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMR---SKYGIEPIIEH 549
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDV 467
+ ++DI + G L A ++ + P+
Sbjct: 550 YSCMIDILGRAGRLLEAYEIIQ--QTPET 576
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 131/258 (50%), Gaps = 3/258 (1%)
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
VH I+ +G +V +C +++ +Y C C+A VF+ +D WNS+++ +++
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 381 QAEELFRLFSRMLASQI-KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+ +F R+L I PD TF +V+ A + + +H + K+G DV V
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVA 145
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
+ L+ +Y K ++ ++F+ M DV SW+++I + Q G ++AL+LF RM S G
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
PN V+L ++ACS + +E G ++R + G S +VD+ + C+ A +
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKK-GFELDEYVNSALVDMYGKCDCLEVARE 264
Query: 560 FINQMACDADIVVWKSLL 577
+M +V W S++
Sbjct: 265 VFQKMP-RKSLVAWNSMI 281
>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
Length = 773
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 181/599 (30%), Positives = 297/599 (49%), Gaps = 55/599 (9%)
Query: 34 RPSTYAGLISACSS--LRSLQLGRKVHDHI----LLSKCQPDVVLQNHILNMYGKCGSLE 87
RPS + ++A +S L +L +G VH + LL V + + ++ MY +CG++
Sbjct: 108 RPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSVAVASSLVYMYARCGNVR 167
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ----SGVMPGQFTFGSII 143
DA F++MP+R+VV+WTA+I+GC +N + + ++ ++M++ V P T S +
Sbjct: 168 DAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLAGDGSVRPNSRTMESGL 227
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
+AC L + GR LH +V+K G + +AL +MY+K DA +F + KDV
Sbjct: 228 EACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTEDACALFLELPEKDVV 287
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------- 254
SW S+I + + G EA+ F +M+ G QP+E + V S N +
Sbjct: 288 SWTSLIGIYCRRGLITEAMELFQQMMESG-LQPDEILVSCVLSGLGNNGNVHGGKTFHAV 346
Query: 255 ---------------------LFNEIDSP----------DLASWNALIAGVASHSNANEA 283
F +DS D SWN ++ G +
Sbjct: 347 ITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKC 406
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCA---CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
+ L+ EM+ R+ SL+ A C L G H Y IK D + V N +
Sbjct: 407 LELYREMQLRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVL 466
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+ MY +C +A +F D V+WN++I++ + L+ +ML + P+
Sbjct: 467 IGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPN 526
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T V+ ACA + +LE ++H Y+ + G +DV + L+D+Y KCG LG AR++F+
Sbjct: 527 STTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFD 586
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
M DVV+W+ +I GY G +AL+LF +M + PN VT + +L+A H GL+EE
Sbjct: 587 SMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSALCHSGLLEE 646
Query: 521 GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G ++ M +Y + P +H +C+VDLL ++G + EAED + M + D +W +LL++
Sbjct: 647 GRKVFTRM-GKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLLSA 704
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 236/494 (47%), Gaps = 49/494 (9%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
+ ++R T + AC L L GR +H +++ ++ + + +MY KC S
Sbjct: 212 GDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYST 271
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
EDA F ++P+++VVSWT++I + +A++L+ QM++SG+ P + ++
Sbjct: 272 EDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGL 331
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
G+V G+ HA + K G ++ NALI+MY KF+ + A VF + ++D SW
Sbjct: 332 GNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWN 391
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQ----PNEFIFGSVFSACSNFARI-------- 254
M+ + K G +++ L + EM Y+ + + S S+CS A +
Sbjct: 392 LMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVADSLV--SAISSCSRLAELRLGRSAHC 449
Query: 255 -----LFNEIDS----------------------------PDLASWNALIAGVASHSNAN 281
L +E S D+ +WN LI+ A ++N
Sbjct: 450 YSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSN 509
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
AMSL+ +M L P+ T+ +++ AC + L +G ++HSY+ +MG+D +V + A++
Sbjct: 510 AAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALI 569
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
MYAKC L A +F + ++ D V+WN +I+ H +A++ LF +M IKP+
Sbjct: 570 DMYAKCGQLGIARRIFDSMLQH-DVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNG 628
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
+TF ++ A LE ++ + K L ++ ++D+ K G L A +
Sbjct: 629 VTFLAILSALCHSGLLEEGRKVFTRMGKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLA 688
Query: 462 ME-NPDVVSWSSLI 474
M PD W +L+
Sbjct: 689 MPIEPDGGIWGTLL 702
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/568 (24%), Positives = 253/568 (44%), Gaps = 66/568 (11%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG--CSQNYQENDAIKLY 124
+PD L +++ Y G A + F P+ + W ++I C+ ++ A+ +
Sbjct: 44 RPD--LAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCASDFVA--ALSAH 99
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK----SEHGSHLIAQNALIAM 180
+ML SG P FT A + LG++ +G +HA+ ++ G + ++L+ M
Sbjct: 100 RRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSVAVASSLVYM 159
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH---HGAYQPN 237
Y + + DA VF + +DV +W ++I+ + G E L + EM+ G+ +PN
Sbjct: 160 YARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLAGDGSVRPN 219
Query: 238 EFIFGSVFSACS-----NFAR-----------------------------------ILFN 257
S AC N R LF
Sbjct: 220 SRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTEDACALFL 279
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
E+ D+ SW +LI EAM LF +M + L PD + V +L ++
Sbjct: 280 ELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGLGNNGNVHG 339
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G H+ I K F +V + NA+++MY K ++ +A VF+ L + D+ SWN ++
Sbjct: 340 GKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQR-DADSWNLMVVGYC 398
Query: 378 QHNQAEELFRLFSRMLASQIKPDH------ITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+ + L+ M Q++ + + + +C+++A L + HCY K
Sbjct: 399 KAGCDVKCLELYREM---QLRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSIKHL 455
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLF 490
L D V N L+ +Y +CG A K+F + DVV+W++LI YA G + A+ L+
Sbjct: 456 LDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLY 515
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
+M G++PN TL+ V++AC+++ +E G ++ ++ E G + ++D+ A+
Sbjct: 516 DQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVK-EMGWDYDVSINTALIDMYAK 574
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLA 578
G + A + M D+V W +++
Sbjct: 575 CGQLGIARRIFDSM-LQHDVVAWNVMIS 601
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 199/466 (42%), Gaps = 62/466 (13%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPST--YAGLISACSSLRSLQLGRKVHDHILLSKCQ 67
C++ L EA+ + Q ++P + ++S + ++ G+ H I
Sbjct: 297 CRRGLITEAM---ELFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFG 353
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
V++ N +++MYGK ++ A F + QR+ SW M+ G + + ++LY +M
Sbjct: 354 DSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREM 413
Query: 128 LQSGVMPGQFTFG-------SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ ++ F S I +CS L + LGR H + IK N LI M
Sbjct: 414 Q----LRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGM 469
Query: 181 YTKFDRILDARNVFSGIAR--KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
Y + + A +F G+A+ DV +W ++I++++ LG+ A+ +++ML G PN
Sbjct: 470 YGRCGKFDHACKIF-GLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEG-LTPNS 527
Query: 239 FIFGSVFSACSNF----------------------------------------ARILFNE 258
+V SAC+N AR +F+
Sbjct: 528 TTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDS 587
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ D+ +WN +I+G H A +A+ LF +M + P+G+T ++L A L +G
Sbjct: 588 MLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSALCHSGLLEEG 647
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
+V + + K + N+ ++ + K L A + + D W ++++AC
Sbjct: 648 RKVFTRMGKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLLSACKL 707
Query: 379 HNQAEELFRLFSRMLASQIKPD--HITFNDVMGACAKMASLEMVTQ 422
H+ E R+ + AS + + +I ++ G K +E + +
Sbjct: 708 HDNFEMGLRIAKKAFASDPENEGYYILISNSYGGAKKWDEIEKLRE 753
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 14/216 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYD------FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRK 56
N +SS N A+ YD + N+T T +ISAC++L +L+ G K
Sbjct: 496 NTLISSYAHLGHSNAAMSLYDQMLIEGLTPNST-------TLITVISACANLVALERGEK 548
Query: 57 VHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQ 116
+H ++ DV + +++MY KCG L AR FD M Q +VV+W MI+G + +
Sbjct: 549 IHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGE 608
Query: 117 ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA 176
A++L+ +M + P TF +I+ A G + GR++ + K +L
Sbjct: 609 AKQALELFGKMEGGSIKPNGVTFLAILSALCHSGLLEEGRKVFTRMGKYSLEPNLKHYAC 668
Query: 177 LIAMYTKFDRILDARN-VFSGIARKDVTSWGSMIAA 211
++ + K + +A + V + D WG++++A
Sbjct: 669 MVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLLSA 704
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 169/540 (31%), Positives = 274/540 (50%), Gaps = 65/540 (12%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N +L++Y K G L DA + F +MP R+ VSWT MI G +++ + DA+K ++ M+ G
Sbjct: 285 NSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFA 344
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P QFT +++ +C+ + + +GR++H V+K S + N+++ MY K AR V
Sbjct: 345 PSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAV 404
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR 253
F + + V+SW M++ ++ G A+ F M+
Sbjct: 405 FERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVER---------------------- 442
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGR 312
+ SWN +IAG + A+ FS M + PD TV S+L AC
Sbjct: 443 ---------SIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANL 493
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV---------------- 356
L G Q+HSYI++ G + + NA+++ YAK + A +
Sbjct: 494 RMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTA 553
Query: 357 ----FKELG------------KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+ +LG N D ++W ++I Q+ Q +E LF M+ +P+
Sbjct: 554 LLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPN 613
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T V+ ACA +A L+ Q+HC ++ V V N ++ +Y + GS+ AR++F+
Sbjct: 614 SHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFD 673
Query: 461 FM-ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ + ++W+S+I+ AQ G G++A+ LF M +GV P+ +T VGVL+AC+H G V+
Sbjct: 674 QICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVD 733
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+G Y M+NE+GI+P H +C+VDL ARAG + EA +FI +M D VVW SLLA+
Sbjct: 734 KGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 793
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 223/515 (43%), Gaps = 110/515 (21%)
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR----ILDARNVF 194
+ +++ C + GR +HAH +K+ N L+A Y +AR +F
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271
Query: 195 SGI--ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA 252
I AR++ +W S+++ ++K G P+ A
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSG-----------------RLPD--------------A 300
Query: 253 RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
++F E+ D SW +I G+ +A+ F +M P T+ ++L +C
Sbjct: 301 HVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAM 360
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS------ 366
G +VH +++K+G S VPV N++L MY KC A VF+ + + S
Sbjct: 361 EACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMV 420
Query: 367 ------------------------VSWNSIIAACLQHNQAEELFRLFSRML-ASQIKPDH 401
VSWN+IIA Q+ + FSRML AS ++PD
Sbjct: 421 SLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDA 480
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK---- 457
T V+ ACA + L+M Q+H YI +TG+ +MN L+ Y K GS+ +AR+
Sbjct: 481 FTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQ 540
Query: 458 -----------------------------LFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
+F+ M N DV++W+++I+GY Q G DEA++
Sbjct: 541 AVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAME 600
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY----RIMENEYGIIPTREHCSCV 544
LF M +G PN TL VL+AC+ + ++ G ++ R ++ + + + +
Sbjct: 601 LFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSV-----SNAI 655
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + AR+G V A +Q+ + + W S++ +
Sbjct: 656 ITVYARSGSVPLARRVFDQICWRKETITWTSMIVA 690
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 193/463 (41%), Gaps = 126/463 (27%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHIL---LSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
T ++S+C+++ + +GRKVH ++ LS C P + N +L MYGKCG E AR F
Sbjct: 349 TLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVP---VANSVLYMYGKCGDAETARAVF 405
Query: 94 DKMP-------------------------------QRNVVSWTAMIAGCSQNYQENDAIK 122
++M +R++VSW +IAG +QN + A+K
Sbjct: 406 ERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALK 465
Query: 123 LYIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+ +ML + M P FT S++ AC+ L + +G+Q+H++++++ NALI+ Y
Sbjct: 466 FFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTY 525
Query: 182 TK------FDRILD---------------------------ARNVFSGIARKDVTSWGSM 208
K RI+D AR +F + +DV +W +M
Sbjct: 526 AKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAM 585
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------ 250
I + + G EA+ F M+ G +PN +V SAC++
Sbjct: 586 IVGYHQNGQNDEAMELFRSMILIGP-EPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSL 644
Query: 251 ----------------------FARILFNEI-DSPDLASWNALIAGVASHSNANEAMSLF 287
AR +F++I + +W ++I +A H +A+ LF
Sbjct: 645 QEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLF 704
Query: 288 SEMRDRELLPDGLTVHSLLCACI-------GRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
EM + PD +T +L AC G+ Q H + +M + +
Sbjct: 705 EEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYA------CM 758
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ ++A+ +L A + + D+V W S++AAC A+
Sbjct: 759 VDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNAD 801
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 193/621 (31%), Positives = 312/621 (50%), Gaps = 64/621 (10%)
Query: 15 YNEALVAYDFSQNN--------------TNIRIRPSTYAGLISACSSLRSLQLGRKVHDH 60
YN L +DFS+NN + + + T + + C L +GR+VH
Sbjct: 72 YNRLL--FDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQ 129
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
L S DV + +++MY K ED R FD+M +NVVSWT++++G ++N ++
Sbjct: 130 SLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEV 189
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
I L QM GV P FTF +++ A + + G Q+HA ++K+ NALI M
Sbjct: 190 IHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICM 249
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA------------------- 221
Y K + + DA VF + +D +W MI ++ +G+ LE
Sbjct: 250 YLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVF 309
Query: 222 -----LC------HFNEMLHHGAYQPNEFIFGS--------VFSACSNF--ARILFNEID 260
LC +F + LH G + N + F +S CS+ A LF+ D
Sbjct: 310 CTALKLCSQQRELNFTKQLHCGVVK-NGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMAD 368
Query: 261 SP-DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
+ ++ +W A+I G ++N +A+ LF +M + P+ T ++L L
Sbjct: 369 AAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL----S 424
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
Q+H+ IIK ++ V A+L Y K + + VF + D V+W++++ Q
Sbjct: 425 QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAK-DIVAWSAMLTGLAQT 483
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAK-MASLEMVTQLHCYITKTGLAFDVFV 438
+E+ +F +++ +KP+ TF+ V+ AC+ A++E Q+H K+G + + V
Sbjct: 484 RDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCV 543
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
+ L+ +Y K G++ SA K+F E D+VSW+S+I GY Q G +AL++F M++ G+
Sbjct: 544 SSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGL 603
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAE 558
+ VT +GVLTAC+H GLVEEG + IM +Y I EH SC+VDL +RAG +A
Sbjct: 604 PLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAM 663
Query: 559 DFINQMACDADIVVWKSLLAS 579
D IN M A +W++LLA+
Sbjct: 664 DIINGMPFPASPTIWRTLLAA 684
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/531 (23%), Positives = 236/531 (44%), Gaps = 56/531 (10%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FD+ P +++ + ++ S+N + +A+ L+ + SG+ T +K C L
Sbjct: 61 FDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQ 120
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
+GRQ+H +KS + +L+ MY K + D R +F + K+V SW S+++ +
Sbjct: 121 VVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGY 180
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------- 251
++ G E + N+M G PN F F +V A ++
Sbjct: 181 ARNGLNDEVIHLINQMQMEGV-NPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFT 239
Query: 252 -------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
A +F+ + D +WN +I G A+ E +F MR
Sbjct: 240 TFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRL 299
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ + L C + L Q+H ++K G++ + A++ Y+KCS +
Sbjct: 300 AGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDE 359
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A +F + V+W ++I +Q+N ++ LF +M ++P+H T++ V+
Sbjct: 360 AFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVL--AG 417
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
K +SL ++QLH I K V L+D Y+K G++ + ++F + D+V+WS+
Sbjct: 418 KPSSL--LSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSA 475
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC-SHVGLVEEGLHLYRIMENE 531
++ G AQ ++A+++F ++ GV PN T V+ AC S VE G ++
Sbjct: 476 MLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHAT---- 531
Query: 532 YGIIPTREHCSCV----VDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ + + CV + + ++ G + AE + + DIV W S++
Sbjct: 532 -AVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQE-ERDIVSWNSMIT 580
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 192/422 (45%), Gaps = 55/422 (13%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+++ + + + CS R L +++H ++ + + ++ ++ Y KC S+++A
Sbjct: 302 VKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAF 361
Query: 91 MGFDKM-PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F NVV+WTAMI G QN A+ L+ QM + GV P FT+ +++ +G
Sbjct: 362 KLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVL---AGK 418
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
S L QLHA +IK+ + AL+ Y K ++++ VF I KD+ +W +M+
Sbjct: 419 PSSLLS-QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAML 477
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL-------------- 255
++ +A+ F +++ G +PNE+ F SV +ACS+ A +
Sbjct: 478 TGLAQTRDSEKAMEVFIQLVKEGV-KPNEYTFSSVINACSSSAATVEHGKQIHATAVKSG 536
Query: 256 ---------------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
F + D+ SWN++I G H +A +A+ +F
Sbjct: 537 KSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQ 596
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKC 347
M+++ L D +T +L AC + +G + + +IK D + ++ +Y++
Sbjct: 597 IMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRA 656
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
+ A+ + + A W +++AAC H EL +L + L S ++P ND
Sbjct: 657 GMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNL-ELGKLAAEKLVS-LQP-----NDA 709
Query: 408 MG 409
+G
Sbjct: 710 VG 711
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 168/371 (45%), Gaps = 28/371 (7%)
Query: 221 ALCHFNEMLH-HGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSN 279
++ H LH HG F S+ S +A LF+E D++ +N L+ + +++
Sbjct: 26 SIHHIKHFLHPHGFLYHQSLPFISLPSR-PRYAHQLFDETPLKDISHYNRLLFDFSRNNH 84
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
EA+ LF ++ L DGLT+ L C G QVH +K GF +V V +
Sbjct: 85 DREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTS 144
Query: 340 ILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
++ MY K + +F E+G KN VSW S+++ ++ +E+ L ++M +
Sbjct: 145 LVDMYMKTEDFEDGRGIFDEMGIKNV--VSWTSLLSGYARNGLNDEVIHLINQMQMEGVN 202
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
P+ TF V+GA A + +E Q+H I K G F FV N L+ +Y+K +G A +
Sbjct: 203 PNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAV 262
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS----- 513
F+ M D V+W+ +I GYA G E ++F RMR GV + L CS
Sbjct: 263 FDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQREL 322
Query: 514 ------HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
H G+V+ G + + ++ T CS V EA +
Sbjct: 323 NFTKQLHCGVVKNGYEFAQDIRT--ALMVTYSKCS----------SVDEAFKLFSMADAA 370
Query: 568 ADIVVWKSLLA 578
++V W +++
Sbjct: 371 HNVVTWTAMIG 381
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 177/558 (31%), Positives = 277/558 (49%), Gaps = 88/558 (15%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGC----------------- 111
+ L N +L+ Y + GSL DAR FD MP RN S+ A+++ C
Sbjct: 49 ETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIP 108
Query: 112 --------------SQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+Q+ + DA++ M + ++F S + AC+ + G Q
Sbjct: 109 DPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQ 168
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+HA V KS HGS + AL+ MY K +R +A+ VF + +++ SW S+I + + G
Sbjct: 169 VHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGP 228
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA----------RILFNEIDSPDLASW 267
EAL F M+ G + P+E SV SAC+ A R++ ++ D+
Sbjct: 229 VDEALALFVRMMKDG-FVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLN 287
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
NAL+ A EA +F M R ++ +
Sbjct: 288 NALVDMYAKCGRTWEAKCVFDRMAIRSVVSE----------------------------- 318
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
+++T YAK + + +A VF ++ + + V+WN +IA +++ EE R
Sbjct: 319 ----------TSMITGYAKSANVGDAQAVFLQMVEK-NVVAWNVLIATYAHNSEEEEALR 367
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF------DVFVMNG 441
LF R+ + P H T+ +V+ ACA +A+L++ Q H ++ K G F DVFV N
Sbjct: 368 LFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNS 427
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+D+Y+K GS+ K+F M D VSW+++I+GYAQ G +AL LF RM P+
Sbjct: 428 LVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPD 487
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
VT++GVL+AC H GLV+EG ++ M ++GIIPTR+H +C++DLL RAG + E E+ I
Sbjct: 488 SVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELI 547
Query: 562 NQMACDADIVVWKSLLAS 579
M + D V+W SLL +
Sbjct: 548 ENMPMEPDAVLWASLLGA 565
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 227/447 (50%), Gaps = 41/447 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++A +SAC+S ++ + G +VH + S DV + +++MY KC E+A+ FD M
Sbjct: 149 SFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAM 208
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+RN+VSW ++I QN ++A+ L+++M++ G +P + T S++ AC+GL + GR
Sbjct: 209 PERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGR 268
Query: 157 QLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
Q+H ++KS+ ++ NAL+ MY K R +A+ VF +A + V S SMI ++K
Sbjct: 269 QVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAK- 327
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVA 275
SA A+ +F ++ ++ +WN LIA A
Sbjct: 328 ------------------------------SANVGDAQAVFLQMVEKNVVAWNVLIATYA 357
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF----- 330
+S EA+ LF ++ + P T ++L AC L G Q H +++K GF
Sbjct: 358 HNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSG 417
Query: 331 -DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
+S+V V N+++ MY K + + VF+ + D+VSWN++I Q+ +A++ LF
Sbjct: 418 PESDVFVGNSLVDMYLKTGSISDGAKVFERMAAR-DNVSWNAMIVGYAQNGRAKDALLLF 476
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIK 448
RML S +PD +T V+ AC ++ + +T+ G+ ++D+ +
Sbjct: 477 ERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGR 536
Query: 449 CGSLGSARKLFNFME-NPDVVSWSSLI 474
G L +L M PD V W+SL+
Sbjct: 537 AGHLKEVEELIENMPMEPDAVLWASLL 563
>gi|302783925|ref|XP_002973735.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
gi|300158773|gb|EFJ25395.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
Length = 836
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 175/591 (29%), Positives = 293/591 (49%), Gaps = 49/591 (8%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++ +TYA + S+L R + +L S V +QN ++N+Y KCG LE AR
Sbjct: 218 VKPNATTYASITRGSSTLTGC---RAMEQRLLASGYMSHVPVQNALVNVYAKCGDLEGAR 274
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGL 149
F+++ +++V+SW+ MI+ +Q+ + ++AI++Y M ++ V P TF +I AC+G
Sbjct: 275 KVFNRLERKDVISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGC 334
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G V G Q+H ++ + + +AL+ MY K + DA+ F + ++DV W M+
Sbjct: 335 GDVIRGIQVHGRLVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFML 394
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------ARIL---- 255
+A+S+ G + + + M +PN + +V ACS +RI+
Sbjct: 395 SAYSERGSPQQVIEAYEAM----DVEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGL 450
Query: 256 --------------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
F + D+ WN ++ G H EA+ L++
Sbjct: 451 ETDMTMETALLSLYIKCRSLKSACQVFEAMGKKDVIPWNFMMVGYIDHDCDTEALRLYAR 510
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M + + + +T + L AC + G +V + I GF+++V A+L MYA C
Sbjct: 511 MHEAGVEANNVTFANALKACSKIKDIETGSKVEAMITTKGFETDVVTDTALLNMYAACGD 570
Query: 350 LCNALLVF-KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
L A VF G+ D V W ++IA+ Q + EE L+ ML+ +IKP+ +T+ V+
Sbjct: 571 LEAAKRVFGSRRGERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVL 630
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
AC+ + ++ ++H + DV V N L+ +Y +CGSL A F + N DV
Sbjct: 631 SACSSLGNILEGRKIHSKLEGKAEELDVAVQNSLLSMYARCGSLRDAWSCFAKIHNRDVF 690
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
SW+ ++ +A G AL+L M GVSP+ VT VL ACSH G +E G + M
Sbjct: 691 SWTGMVAAFAHHGHSARALELVREMELCGVSPDAVTFQSVLHACSHEGSLERGWASFVSM 750
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+Y + P+++H C+VDLLARAG + EA + I + + + + W LL +
Sbjct: 751 AVDYAVEPSKDHYLCMVDLLARAGRLAEAREVIQFVGLERESMGWMMLLGA 801
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 175/606 (28%), Positives = 306/606 (50%), Gaps = 55/606 (9%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
NEA + ++ ++ IR T ++ ACS L G+KVH +I S+ + D+ LQ
Sbjct: 106 NEAFLLFERMESE-GIRPNAVTCLHVLGACSYQNELPFGKKVHAYISASEFKWDISLQTS 164
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
++NMY KCGS DA+ FD M ++++V+W AM N Q + KL +M GV P
Sbjct: 165 LVNMYAKCGSPADAKAVFDSMARKDIVTWNAMAGASVHNGQSH---KLLREMDLQGVKPN 221
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
T+ SI + S L R + ++ S + SH+ QNAL+ +Y K + AR VF+
Sbjct: 222 ATTYASITRGSSTLTGC---RAMEQRLLASGYMSHVPVQNALVNVYAKCGDLEGARKVFN 278
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL 255
+ RKDV SW +MI+A+++ G EA+ + M + +PN F V AC+ ++
Sbjct: 279 RLERKDVISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVI 338
Query: 256 ----------------------------------------FNEIDSPDLASWNALIAGVA 275
F+ ++ D+ WN +++ +
Sbjct: 339 RGIQVHGRLVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFMLSAYS 398
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
+ + + + M ++ P+ +T ++L AC L QG +VHS I+ G ++++
Sbjct: 399 ERGSPQQVIEAYEAM---DVEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMT 455
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
+ A+L++Y KC L +A VF+ +GK D + WN ++ + H+ E RL++RM +
Sbjct: 456 METALLSLYIKCRSLKSACQVFEAMGKK-DVIPWNFMMVGYIDHDCDTEALRLYARMHEA 514
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA 455
++ +++TF + + AC+K+ +E +++ IT G DV L+++Y CG L +A
Sbjct: 515 GVEANNVTFANALKACSKIKDIETGSKVEAMITTKGFETDVVTDTALLNMYAACGDLEAA 574
Query: 456 RKLFNFM--ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
+++F E DVV W+++I YAQ G G+EAL L+ M S + PN VT VL+ACS
Sbjct: 575 KRVFGSRRGERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACS 634
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
+G + EG ++ +E + + S ++ + AR G + +A ++ + D+ W
Sbjct: 635 SLGNILEGRKIHSKLEGKAEELDVAVQNS-LLSMYARCGSLRDAWSCFAKIH-NRDVFSW 692
Query: 574 KSLLAS 579
++A+
Sbjct: 693 TGMVAA 698
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/550 (27%), Positives = 273/550 (49%), Gaps = 48/550 (8%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
+V +N ++ ++GK G+ + +R FD M Q+NV SW+ MI +QN N+A L+ +M
Sbjct: 57 NVYFRNWLIQLHGKFGNTQKSREVFDGMQQKNVYSWSMMIGAYAQNGHRNEAFLLFERME 116
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
G+ P T ++ ACS + G+++HA++ SE + Q +L+ MY K
Sbjct: 117 SEGIRPNAVTCLHVLGACSYQNELPFGKKVHAYISASEFKWDISLQTSLVNMYAKCGSPA 176
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS----- 243
DA+ VF +ARKD+ +W +M A G + L EM G +PN + S
Sbjct: 177 DAKAVFDSMARKDIVTWNAMAGASVHNGQSHKLL---REMDLQGV-KPNATTYASITRGS 232
Query: 244 ------------------------------VFSACSNF--ARILFNEIDSPDLASWNALI 271
V++ C + AR +FN ++ D+ SW+ +I
Sbjct: 233 STLTGCRAMEQRLLASGYMSHVPVQNALVNVYAKCGDLEGARKVFNRLERKDVISWSTMI 292
Query: 272 AGVASHSNANEAMSLFSEMR-DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
+ +EA+ ++ M + + P+ +T ++ AC G + +G+QVH ++ +G
Sbjct: 293 SAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGIQVHGRLVSLGL 352
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+++V V +A++ MY KC L +A F + K D + WN +++A + +++ +
Sbjct: 353 ETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKR-DVLCWNFMLSAYSERGSPQQVIEAYE 411
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
M ++P+ +T+ +V+ AC+ M L ++H I +GL D+ + L+ +YIKC
Sbjct: 412 AM---DVEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETALLSLYIKCR 468
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
SL SA ++F M DV+ W+ +++GY C EAL+L+ RM GV N VT L
Sbjct: 469 SLKSACQVFEAMGKKDVIPWNFMMVGYIDHDCDTEALRLYARMHEAGVEANNVTFANALK 528
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED-FINQMACDAD 569
ACS + +E G + ++ + G + ++++ A G + A+ F ++ D
Sbjct: 529 ACSKIKDIETGSKVEAMITTK-GFETDVVTDTALLNMYAACGDLEAAKRVFGSRRGERRD 587
Query: 570 IVVWKSLLAS 579
+V W +++AS
Sbjct: 588 VVFWTAMIAS 597
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 228/505 (45%), Gaps = 58/505 (11%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S+ + ++EA+ Y ++ T++ T+ G+I AC+ + G +VH ++
Sbjct: 292 ISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGIQVHGRLVSLG 351
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ DV + + ++ MY KCGSLEDA+ FD++ +R+V+ W M++ S+ I+ Y
Sbjct: 352 LETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFMLSAYSERGSPQQVIEAYE 411
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M V P T+ +++ ACS + + G+++H+ ++ S + + + AL+++Y K
Sbjct: 412 AM---DVEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETALLSLYIKCR 468
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A VF + +KDV W M+ + + EAL + M H + N F +
Sbjct: 469 SLKSACQVFEAMGKKDVIPWNFMMVGYIDHDCDTEALRLYARM-HEAGVEANNVTFANAL 527
Query: 246 SACSNFARI------------------------LFN------------------EIDSPD 263
ACS I L N + D
Sbjct: 528 KACSKIKDIETGSKVEAMITTKGFETDVVTDTALLNMYAACGDLEAAKRVFGSRRGERRD 587
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+ W A+IA A EA++L+ M E+ P+ +T S+L AC + +G ++HS
Sbjct: 588 VVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILEGRKIHS 647
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ + +V V N++L+MYA+C L +A F ++ N D SW ++AA H +
Sbjct: 648 KLEGKAEELDVAVQNSLLSMYARCGSLRDAWSCFAKI-HNRDVFSWTGMVAAFAHHGHSA 706
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG-- 441
L M + PD +TF V+ AC+ SLE + + +A D V
Sbjct: 707 RALELVREMELCGVSPDAVTFQSVLHACSHEGSLE-----RGWASFVSMAVDYAVEPSKD 761
Query: 442 ----LMDIYIKCGSLGSARKLFNFM 462
++D+ + G L AR++ F+
Sbjct: 762 HYLCMVDLLARAGRLAEAREVIQFV 786
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 204/427 (47%), Gaps = 67/427 (15%)
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
L+A + + ++ +N LI ++ KF +R VF G+ +K+V SW MI A+++ G+
Sbjct: 45 LYARFTGTGYLDNVYFRNWLIQLHGKFGNTQKSREVFDGMQQKNVYSWSMMIGAYAQNGH 104
Query: 218 ELEALCHFNEMLHHG---------------AYQPNEFIFGS---VFSACSNF-------- 251
EA F M G +YQ NE FG + + S F
Sbjct: 105 RNEAFLLFERMESEGIRPNAVTCLHVLGACSYQ-NELPFGKKVHAYISASEFKWDISLQT 163
Query: 252 --------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
A+ +F+ + D+ +WNA+ AG + H+ ++ L EM + + P
Sbjct: 164 SLVNMYAKCGSPADAKAVFDSMARKDIVTWNAM-AGASVHN--GQSHKLLREMDLQGVKP 220
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+ T S+ G TL + ++ G+ S+VPV NA++ +YAKC L A VF
Sbjct: 221 NATTYASI---TRGSSTLTGCRAMEQRLLASGYMSHVPVQNALVNVYAKCGDLEGARKVF 277
Query: 358 KELGKNADSVSWNSIIAACLQ---HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
L + D +SW+++I+A Q H++A E++RL + ++P+ +TF V+GAC
Sbjct: 278 NRLERK-DVISWSTMISAYNQSGRHSEAIEIYRLMES--ETSVEPNAVTFVGVIGACTGC 334
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+ Q+H + GL DV V + L+ +Y+KCGSL A+K F+ +E DV+ W+ ++
Sbjct: 335 GDVIRGIQVHGRLVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFML 394
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS-----------HVGLVEEGLH 523
Y++ G + ++ + ++ V PN VT VL ACS H +V GL
Sbjct: 395 SAYSERGSPQQVIEAY---EAMDVEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLE 451
Query: 524 LYRIMEN 530
ME
Sbjct: 452 TDMTMET 458
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 84/155 (54%), Gaps = 1/155 (0%)
Query: 1 FSNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDH 60
F ++S + EAL Y + + I+ TY ++SACSSL ++ GRK+H
Sbjct: 590 FWTAMIASYAQAGRGEEALALYK-TMLSEEIKPNSVTYTSVLSACSSLGNILEGRKIHSK 648
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ + DV +QN +L+MY +CGSL DA F K+ R+V SWT M+A + + A
Sbjct: 649 LEGKAEELDVAVQNSLLSMYARCGSLRDAWSCFAKIHNRDVFSWTGMVAAFAHHGHSARA 708
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
++L +M GV P TF S++ ACS GS+ G
Sbjct: 709 LELVREMELCGVSPDAVTFQSVLHACSHEGSLERG 743
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 132/281 (46%), Gaps = 30/281 (10%)
Query: 313 LTLYQGMQ-------VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
LTL Q Q +++ G+ NV N ++ ++ K + VF + + +
Sbjct: 30 LTLLQQCQDSGELDVLYARFTGTGYLDNVYFRNWLIQLHGKFGNTQKSREVFDGM-QQKN 88
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
SW+ +I A Q+ E F LF RM + I+P+ +T V+GAC+ L ++H
Sbjct: 89 VYSWSMMIGAYAQNGHRNEAFLLFERMESEGIRPNAVTCLHVLGACSYQNELPFGKKVHA 148
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
YI+ + +D+ + L+++Y KCGS A+ +F+ M D+V+W+++ G +
Sbjct: 149 YISASEFKWDISLQTSLVNMYAKCGSPADAKAVFDSMARKDIVTWNAMAGASVHNG---Q 205
Query: 486 ALKLFTRMRSLGVSPNLVTLVGV------LTACSHVGLVEEGLHLYRIMENEY-GIIPTR 538
+ KL M GV PN T + LT C + R++ + Y +P +
Sbjct: 206 SHKLLREMDLQGVKPNATTYASITRGSSTLTGCRAME--------QRLLASGYMSHVPVQ 257
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ +V++ A+ G + A N++ D++ W +++++
Sbjct: 258 ---NALVNVYAKCGDLEGARKVFNRLE-RKDVISWSTMISA 294
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09040, mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 185/601 (30%), Positives = 294/601 (48%), Gaps = 42/601 (6%)
Query: 20 VAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNM 79
+ Y F+ ++++ ST ++SA + +L LG VH + ++ + + +++M
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 80 YGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTF 139
Y KC +E A F+ + ++N V W AMI G + N + + ++L++ M SG FTF
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 140 GSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR 199
S++ C+ + +G Q H+ +IK + +L NAL+ MY K + DAR +F +
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 200 KDVTSWGSMIAAFSKLGYELEALCHFNEM-------------------LH-HGAYQPNEF 239
+D +W ++I ++ + E EA F M H HG YQ +
Sbjct: 492 RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Query: 240 IFGSV-----------------FSACS--NFARILFNEIDSPDLASWNALIAGVASHSNA 280
SV +S C AR +F+ + + S NALIAG S +N
Sbjct: 552 HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNNL 610
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN-A 339
EA+ LF EM R + P +T +++ AC +L G Q H I K GF S +
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS 670
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
+L MY + A +F EL V W +++ Q+ EE + + M + P
Sbjct: 671 LLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLP 730
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D TF V+ C+ ++SL +H I D N L+D+Y KCG + + ++F
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVF 790
Query: 460 NFMEN-PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
+ M +VVSW+SLI GYA+ G ++ALK+F MR + P+ +T +GVLTACSH G V
Sbjct: 791 DEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKV 850
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+G ++ +M +YGI +H +C+VDLL R G + EA+DFI D +W SLL
Sbjct: 851 SDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLG 910
Query: 579 S 579
+
Sbjct: 911 A 911
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 266/520 (51%), Gaps = 9/520 (1%)
Query: 50 SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIA 109
+L++G+ VH L+ + L N I+++Y KC + A FD + +++V +W +M++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 110 GCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGS 169
S + ++ ++ + ++ + P +FTF ++ C+ +V GRQ+H +IK
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
+ AL+ MY K DRI DAR VF I + W + + + K G EA+ F M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 230 HHGAYQPNEFIFGSVFSACSNF-----ARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
G ++P+ F +V + AR+LF E+ SPD+ +WN +I+G A+
Sbjct: 254 DEG-HRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAI 312
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
F MR + T+ S+L A L G+ VH+ IK+G SN+ V +++++MY
Sbjct: 313 EYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
+KC + A VF+ L + D V WN++I + ++ ++ LF M +S D TF
Sbjct: 373 SKCEKMEAAAKVFEALEEKND-VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
++ CA LEM +Q H I K LA ++FV N L+D+Y KCG+L AR++F M +
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
D V+W+++I Y Q EA LF RM G+ + L L AC+HV + +G +
Sbjct: 492 RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Query: 525 YRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
+ + + G+ S ++D+ ++ G + +A + +
Sbjct: 552 H-CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSL 590
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/516 (26%), Positives = 227/516 (43%), Gaps = 78/516 (15%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T++ ++S C+ +++ GR++H ++ + + +++MY KC + DAR F+ +
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
N V WT + +G + +A+ ++ +M G P F ++I
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT----------- 270
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Y + ++ DAR +F ++ DV +W MI+ K G
Sbjct: 271 ------------------------YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
E A+ +F M + + GSV SA A +
Sbjct: 307 CETVAIEYFFNM-RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVG 365
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+F ++ + WNA+I G A + +++ M LF +M+
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
D T SLL C L G Q HS IIK N+ V NA++ MYAKC L +A +
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F+ + + D+V+WN+II + +Q E F LF RM I D + AC +
Sbjct: 486 FERMC-DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHG 544
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L Q+HC K GL D+ + L+D+Y KCG + ARK+F+ + VVS ++LI G
Sbjct: 545 LYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG 604
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
Y+Q +EA+ LF M + GV+P+ +T ++ AC
Sbjct: 605 YSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 116/213 (54%), Gaps = 2/213 (0%)
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
L L G VHS + +G DS + NAI+ +YAKC+ + A F L K D +WNS+
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK--DVTAWNSM 131
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
++ + ++ R F + +QI P+ TF+ V+ CA+ ++E Q+HC + K GL
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
+ + L+D+Y KC + AR++F ++ +P+ V W+ L GY + G +EA+ +F R
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
MR G P+ + V V+ +G +++ L+
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLF 284
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 117/515 (22%), Positives = 198/515 (38%), Gaps = 129/515 (25%)
Query: 154 LGRQLHAHVI-----------------------------------------KSEHGSHLI 172
LGR+++ HV+ K+ H LI
Sbjct: 29 LGRRIYGHVLPSHDQIHQRLLEICLGQCKLFKSRKVFDEMPQRLALALRIGKAVHSKSLI 88
Query: 173 --------AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCH 224
NA++ +Y K ++ A F KDVT+W SM++ +S +G + L
Sbjct: 89 LGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGKPGKVLRS 147
Query: 225 FNEMLHHGAYQPNEFIFGSVFSACS----------------------------------- 249
F + + + PN+F F V S C+
Sbjct: 148 FVSLFENQIF-PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYA 206
Query: 250 -----NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
+ AR +F I P+ W L +G EA+ +F MRD PD L
Sbjct: 207 KCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAF-- 264
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
V V N Y + L +A L+F E+ +
Sbjct: 265 -----------------------------VTVINT----YIRLGKLKDARLLFGEM-SSP 290
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
D V+WN +I+ + F M S +K T V+ A +A+L++ +H
Sbjct: 291 DVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVH 350
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
K GLA +++V + L+ +Y KC + +A K+F +E + V W+++I GYA G
Sbjct: 351 AEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESH 410
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV 544
+ ++LF M+S G + + T +L+ C+ +E G + I+ + + + +
Sbjct: 411 KVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK-KLAKNLFVGNAL 469
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
VD+ A+ G + +A +M CD D V W +++ S
Sbjct: 470 VDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGS 503
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + Y EAL Y + + +T+ ++ CS L SL+ GR +H I
Sbjct: 704 MSGHSQNGFYEEALKFYK-EMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLA 762
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-NVVSWTAMIAGCSQNYQENDAIKLY 124
D + N +++MY KCG ++ + FD+M +R NVVSW ++I G ++N DA+K++
Sbjct: 763 HDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIF 822
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI-------KSEHGSHLIAQNAL 177
M QS +MP + TF ++ ACS G V GR++ +I + +H + ++
Sbjct: 823 DSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGR 882
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ D ++A+N+ + D W S++ A
Sbjct: 883 WGYLQEADDFIEAQNL-----KPDARLWSSLLGA 911
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 177/555 (31%), Positives = 282/555 (50%), Gaps = 61/555 (10%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+SA + L L R+V D I P+ N +L+ + + G DAR F +P +
Sbjct: 801 LVSAYARLGRLPDARRVFDEI----PHPNTFSYNALLSAHARLGRPADARALFHAIPDPD 856
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
S+ A+IA +Q+ + DA+ M + ++F S + AC+ G Q+HA
Sbjct: 857 QCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHA 916
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
V KS H + +AL+ MY K + +AR VF + +++ SW S+I + + G E
Sbjct: 917 LVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGE 976
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------ARILFNEIDSPDLASWNAL 270
AL F M+ G + P+E SV SAC+ AR++ ++ D+ NAL
Sbjct: 977 ALVLFVSMMKAG-FVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNAL 1035
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
+ A A +F M R ++ +
Sbjct: 1036 VDMYAKCGRTRAARCVFDRMASRSVVSE-------------------------------- 1063
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+++T YA+ + + +A +VF ++ + + ++WN +IAA Q+ + EE RLF
Sbjct: 1064 -------TSLITGYARSANVEDAQMVFSQMVEK-NVIAWNVLIAAYAQNGEEEEALRLFV 1115
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF------DVFVMNGLMD 444
R+ + P H T+ +V+ AC +A L++ Q H ++ K G F DVFV N L+D
Sbjct: 1116 RLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVD 1175
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y+K GS+ K+F M D VSW+++I+G+AQ G +AL LF RM SP+ VT
Sbjct: 1176 MYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVT 1235
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
++GVL+AC H GLVEEG +R M ++GIIP+++H +C++DLL RAG + E E+ I +M
Sbjct: 1236 MIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEM 1295
Query: 565 ACDADIVVWKSLLAS 579
+ + D V+W SLL S
Sbjct: 1296 SMEPDAVLWASLLGS 1310
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 166/573 (28%), Positives = 293/573 (51%), Gaps = 37/573 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +++ + +EAL + + N+ IR + +T A ++S C+ L R++H HI
Sbjct: 120 NAIITASSRAGHPSEALSLFS-NMNSLGIRPKDATMASVLSCCAECLDLCGARQLHGHIA 178
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
Q +V+L ++++YG C L DAR FD + + N +SW ++ + A+
Sbjct: 179 KRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVD 238
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ +ML +GV P +T + AC ++ GR +HA V++ + H+ +++++ MY
Sbjct: 239 MFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYA 298
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + A+++F+ KD+ S+++ + G +A
Sbjct: 299 KCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADA--------------------- 337
Query: 243 SVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
+ +F + +L SWNA++ G + A+ LF +MR D +T+
Sbjct: 338 ----------KRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITL 387
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA--LLVFKEL 360
S+L AC G L + +G +VH++ IK GF S+ + NA++ MY+KC L +A LL+F E+
Sbjct: 388 GSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLF-EM 446
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
G DS SWNS+I+ +H+ +E ++M S++ P+ TF+ + ACA + L+
Sbjct: 447 GSERDSYSWNSLISGYERHSMSEAALYALTKM-QSEVTPNQSTFSSALAACANIFLLKQG 505
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
Q+H Y+ + G D + + L+D+Y KC + ++F + DV+ W+S+I G A
Sbjct: 506 MQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYS 565
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
G G+ L LF M+ G+ + VT +G L +C G V G + +M +E IIP EH
Sbjct: 566 GKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDE-SIIPRIEH 624
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
C+++LL + GC+ E EDF+ M + +W
Sbjct: 625 YECMIELLGKHGCMVELEDFVEHMPFEPTTAMW 657
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 219/496 (44%), Gaps = 98/496 (19%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++A +SAC++ + + G +VH + S DV + + +L+MY KC E+AR F+ M
Sbjct: 894 SFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAM 953
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+RN+VSW ++I QN +A+ L++ M+++G +P + T S++ AC+GL + GR
Sbjct: 954 PERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGR 1013
Query: 157 QLHAHVIKSEH-GSHLIAQNALIAMYTK----------FDR------------------- 186
Q+HA V+KS+ ++ NAL+ MY K FDR
Sbjct: 1014 QVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARS 1073
Query: 187 --ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ DA+ VFS + K+V +W +IAA+++ G E EAL F + + P + +G+V
Sbjct: 1074 ANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVW-PTHYTYGNV 1132
Query: 245 FSACSNFARI----------------------------------------------LFNE 258
+AC N A + +F
Sbjct: 1133 LNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFER 1192
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ + D SWNA+I G A + A +A+ LF M + PD +T+ +L AC + +G
Sbjct: 1193 MAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEG 1252
Query: 319 MQVHSYIIKMGFDSN-VPVCN---AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
+ Y M D +P + ++ + + L + KE+ D+V W S++
Sbjct: 1253 RR---YFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLG 1309
Query: 375 ACLQHNQAE-------ELFRLFSR-----MLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
+C H E +LF L R +L S + + + DV + M + Q
Sbjct: 1310 SCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQ 1369
Query: 423 LHCYITKTGLAFDVFV 438
C + G VF+
Sbjct: 1370 PGCSWIEIGRKVSVFL 1385
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 177/370 (47%), Gaps = 40/370 (10%)
Query: 245 FSACSNFA--RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
+AC + A R LF+ + D SWNA+I + + +EA+SLFS M + P T+
Sbjct: 95 LAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATM 154
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
S+L C L L Q+H +I K F SNV + A++ +Y C +L +A F ++
Sbjct: 155 ASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDI-L 213
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
+++SWN I+ + +F RML++ ++P T + + AC +LE
Sbjct: 214 EPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRC 273
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF--------------------- 461
+H ++ + G V V + ++D+Y KCG++ +A+ LFN
Sbjct: 274 IHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGR 333
Query: 462 ----------MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
M+ ++VSW++++ GY + AL LF +MR + +TL VL+A
Sbjct: 334 IADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSA 393
Query: 512 CSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED-FINQMACDA 568
C+ + + +G +H + I + G + + +V + ++ GC+ AE + +M +
Sbjct: 394 CTGILDIGKGEEVHAFAI---KCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSER 450
Query: 569 DIVVWKSLLA 578
D W SL++
Sbjct: 451 DSYSWNSLIS 460
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 7/243 (2%)
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
N + A C + +A +F +L D SWN+II A + E LFS M + I
Sbjct: 89 NRAIESLAACGSVADARELF-DLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGI 147
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
+P T V+ CA+ L QLH +I K +V + L+D+Y C L AR+
Sbjct: 148 RPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARR 207
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
F+ + P+ +SW+ ++ Y G GD A+ +F RM S GV P T+ + AC
Sbjct: 208 AFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNA 267
Query: 518 VEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
+EEG +H + + + R S VVD+ A+ G + A+ N +A D+V+ S
Sbjct: 268 LEEGRCIHAFVLRHGYEHHVHVR---SSVVDMYAKCGAMDAAQSLFN-LAPMKDMVMSTS 323
Query: 576 LLA 578
+++
Sbjct: 324 IVS 326
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 174/522 (33%), Positives = 275/522 (52%), Gaps = 63/522 (12%)
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA-QNAL 177
+A+ + M+++G+ P T+ S+++ C S+ + LHAH+I+++ I+ N L
Sbjct: 47 EALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKL 106
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
+++Y K +++AR VF + K+V SW +MIAA+++ + EAL F EM G QPN
Sbjct: 107 VSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVG-IQPN 165
Query: 238 EFIFGSVFSACSN-------------------------------------FARILFNEID 260
F F S+ AC++ FAR LF+++
Sbjct: 166 HFTFASILPACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMP 225
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP-DGLTVHSLLCACI-GRLTLYQG 318
D+ SWNA+IAG + +A+ LF E+ R+++ + + C + + L++
Sbjct: 226 QRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEK 285
Query: 319 MQVHSYI--------------IKMGF-------DSNVPVCNAILTMYAKCSVLCNALLVF 357
M + + +K F + NV NA+++ +A+ + AL +F
Sbjct: 286 MPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLF 345
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
K + + VSWN++IA Q+ QAE +LF +M +KP+ TF V+ ACA +A L
Sbjct: 346 KTM-PECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVL 404
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
E + H + ++G DV V N L+ +Y KCGS+ ARK+F+ M D S S++I+GY
Sbjct: 405 EQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGY 464
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
A GC E+L+LF +M+ G+ P+ VT VGVL+AC H GLV+EG + IM Y I P
Sbjct: 465 AINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPA 524
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH C++DLL RAGC EA D IN+M D +W SLL++
Sbjct: 525 MEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSA 566
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 162/339 (47%), Gaps = 38/339 (11%)
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
+ L+ + EA+ + +M + + P T SLL C+ +L +H+++I+
Sbjct: 33 DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92
Query: 328 MGFD-SNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQHNQAEEL 385
F+ ++ + N ++++Y K L A VF E+ KN VSW ++IAA +H +E
Sbjct: 93 TQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNV--VSWTAMIAAYARHEHGQEA 150
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
F M I+P+H TF ++ AC LE++ + H I K G +VFV NGL+D+
Sbjct: 151 LGFFYEMQDVGIQPNHFTFASILPAC---TDLEVLGEFHDEIVKGGFESNVFVGNGLVDM 207
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y K G + AR+LF+ M DVVSW+++I GY Q G ++ALKLF + V +T
Sbjct: 208 YAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDV----ITW 263
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENE------------------------YGIIPTREHC 541
++ + G VE + L+ M + + I+P R
Sbjct: 264 NTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVI 323
Query: 542 S--CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
S V+ A+ G V EA M + ++V W +++A
Sbjct: 324 SWNAVISGFAQNGQVEEALKLFKTMP-ECNVVSWNAMIA 361
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 188/434 (43%), Gaps = 86/434 (19%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
A F ++ I+P+ T+A ++ AC+ L L + HD I+ + +V + N +++
Sbjct: 150 ALGFFYEMQDVGIQPNHFTFASILPACTDLEVLG---EFHDEIVKGGFESNVFVGNGLVD 206
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV------ 132
MY K G +E AR FDKMPQR+VVSW AMIAG QN DA+KL+ ++ + V
Sbjct: 207 MYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTM 266
Query: 133 -------------------MPGQ--FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL 171
MP Q ++ ++I GSV +L I E ++
Sbjct: 267 MAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQ--IMPER--NV 322
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH 231
I+ NA+I+ + + ++ +A +F + +V SW +MIA +S+ G AL F +M
Sbjct: 323 ISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQM-QM 381
Query: 232 GAYQPNEFIFGSVFSACSNFA--------------------------------------- 252
+PN F V AC+ A
Sbjct: 382 VDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIED 441
Query: 253 -RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
R +F+ + D AS +A+I G A + + E++ LF +M+ L PD +T +L AC
Sbjct: 442 ARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCH 501
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPV-----CNAILTMYAKCSVLCNALLVFKELGKNADS 366
+ +G Q + + F P C L A C N L+ + +AD
Sbjct: 502 AGLVDEGRQYFDIMTR--FYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADM 559
Query: 367 VSWNSIIAACLQHN 380
W S+++AC HN
Sbjct: 560 --WGSLLSACRTHN 571
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 171/550 (31%), Positives = 281/550 (51%), Gaps = 43/550 (7%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM- 127
D+ N+ L + K L+DAR FD++PQR+ VSWT +I+G + ++A++L+ +M
Sbjct: 48 DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107
Query: 128 LQSGVMPGQFTFGSIIKACSGLG-SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
LQS + F +K C GLG + G LH +K + + +AL+ MY K
Sbjct: 108 LQSELRIDPFLLSLGLKTC-GLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGE 166
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM------------------ 228
I + VF + ++ +W ++I + GY L +F+ M
Sbjct: 167 IGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKA 226
Query: 229 ------LHHG----------AYQPNEFIFGSV---FSACS--NFARILFNEIDSPDLASW 267
L+HG + N F+ S+ ++ C ++ F ++ + D+ SW
Sbjct: 227 SADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSW 286
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
++ + + F MR ++P+ T +++ C L G Q+H++++
Sbjct: 287 TTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLC 346
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
+GF + + V N+I+T+Y+KC L + VF + K D ++W++IIAA Q EE F
Sbjct: 347 VGFVNALSVANSIMTLYSKCGELASVSKVFCSM-KFRDIITWSTIIAAYSQVGYGEEAFE 405
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
SRM + KP+ V+ C MA LE QLH ++ GL V + L+ +Y
Sbjct: 406 YLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYA 465
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
KCGS+ A K+F D++SW+++I GYA+ G EA++LF ++ +G+ P+ VT +G
Sbjct: 466 KCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIG 525
Query: 508 VLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
VLTACSH G+V+ G + + M +Y I P++EH C++DLL RAG +H+AE I M
Sbjct: 526 VLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQ 585
Query: 568 ADIVVWKSLL 577
D VVW +LL
Sbjct: 586 WDDVVWSTLL 595
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 130/523 (24%), Positives = 221/523 (42%), Gaps = 61/523 (11%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
+EAL + + + +RI P + + C + G +H + V + +
Sbjct: 97 SEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSA 156
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
+L+MY K G + + FD+MP RN V+WTA+I G + + + M +S V
Sbjct: 157 LLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYD 216
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
+ + +KA + G++ GR +H +K + N+L MY K ++ + F
Sbjct: 217 SYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFR 276
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL 255
+ DV SW +++ A+ ++G E L F M PNE+ F +V S C+NFAR+
Sbjct: 277 KMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVI-PNEYTFSAVISCCANFARLK 335
Query: 256 FNE----------------------------------------IDSPDLASWNALIAGVA 275
+ E + D+ +W+ +IA +
Sbjct: 336 WGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYS 395
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
EA S MR P+ + S+L C L QG Q+H++++ +G +
Sbjct: 396 QVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSM 455
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
VC+A++ MYAKC + A +F + K+ D +SW ++I+ +H ++E LF +
Sbjct: 456 VCSALIIMYAKCGSIAEASKIFMDSWKD-DIISWTAMISGYAEHGHSQEAIELFENIQKV 514
Query: 396 QIKPDHITFNDVMGAC--AKMASL------EMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
++PD +TF V+ AC A M L M H +K ++D+
Sbjct: 515 GLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGC-------MIDLLC 567
Query: 448 KCGSLGSARKLFNFME-NPDVVSWSSLILG---YAQFGCGDEA 486
+ G L A L M D V WS+L+ + CG A
Sbjct: 568 RAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRA 610
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 200/455 (43%), Gaps = 70/455 (15%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
Y+EA +AY + + YA + A + +L GR +H L + + N
Sbjct: 197 YSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVAN 256
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
+ MY KCG L+ F KM +VVSWT ++ Q +E+ ++ + +M S V+P
Sbjct: 257 SLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIP 316
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
++TF ++I C+ + G QLHAHV+ + L N+++ +Y+K + VF
Sbjct: 317 NEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVF 376
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
+ +D+ +W ++IAA+S++GY EA + + M G +PNEF SV S C + A +
Sbjct: 377 CSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGP-KPNEFALASVLSVCGSMAIL 435
Query: 255 ----------------------------------------LFNEIDSPDLASWNALIAGV 274
+F + D+ SW A+I+G
Sbjct: 436 EQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGY 495
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF---- 330
A H ++ EA+ LF ++ L PD +T +L AC H+ ++ +GF
Sbjct: 496 AEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTAC-----------SHAGMVDLGFYYFN 544
Query: 331 ----DSNVPVCNA----ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
D ++ ++ + + L +A + + + D V W++++ AC H
Sbjct: 545 SMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDV 604
Query: 383 EELFRLFSRMLASQIKPD----HITFNDVMGACAK 413
+ R + +L ++ P+ HIT ++ A K
Sbjct: 605 DCGQRAAAEVL--KLDPNCAGTHITLANIFAAKGK 637
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 173/386 (44%), Gaps = 28/386 (7%)
Query: 29 TNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
+N+ T++ +IS C++ L+ G ++H H+L + + N I+ +Y KCG L
Sbjct: 312 SNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELAS 371
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
F M R++++W+ +IA SQ +A + +M G P +F S++ C
Sbjct: 372 VSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGS 431
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+ + G+QLHAHV+ + +ALI MY K I +A +F + D+ SW +M
Sbjct: 432 MAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAM 491
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEID--- 260
I+ +++ G+ EA+ F E + +P+ F V +ACS+ + FN +
Sbjct: 492 ISGYAEHGHSQEAIELF-ENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDY 550
Query: 261 --SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+P + +I + ++A +L +R + D + +LL AC + G
Sbjct: 551 HITPSKEHYGCMIDLLCRAGRLHDAETL---IRSMPIQWDDVVWSTLLRACRIHGDVDCG 607
Query: 319 MQVHSYIIKMGFD--------SNVPVCNAILTMYAKCSVLCNALLVFKELG----KNADS 366
+ + ++K+ + +N+ A +L + V KE G K DS
Sbjct: 608 QRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDS 667
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRM 392
V + ++ H Q E+++ + +
Sbjct: 668 VF--AFVSGDRSHPQGEDIYNILEEL 691
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 180/587 (30%), Positives = 292/587 (49%), Gaps = 56/587 (9%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+ +CS+ R VH HI+ + P + L+N +L Y + G AR D+MP+ N
Sbjct: 24 LRSCSAPRH---AAAVHAHIVRAHPSPSLFLRNTLLAAYCRLGG--HARRLLDEMPRTNA 78
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
VS+ +I S+ Q +++ + + +S GV +FT+ + + ACS G + G+ +HA
Sbjct: 79 VSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHA 138
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+ + N+L++MY + + AR VF +D SW ++++ + + G + +
Sbjct: 139 LSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDD 198
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------------- 249
L F M+ N F GSV C+
Sbjct: 199 MLRVF-AMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASA 257
Query: 250 -----------NFARILFNEIDSPDLASWNALIAGVASHSNA------NEAMSLFSEMRD 292
+ A LF + P++ +NA+IAG+ A EA+SL+SE++
Sbjct: 258 MVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQS 317
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
R + P T S++ AC + G Q+H ++K F + + +A++ +Y + +
Sbjct: 318 RGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMED 377
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
F + K D V+W ++I+ C+Q+ E LF +L + +KPD T + VM ACA
Sbjct: 378 GFRCFTSVPKQ-DVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACA 436
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+A Q+ C+ TK+G + N + +Y + G + +A + F ME+ D+VSWS+
Sbjct: 437 SLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSA 496
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
+I +AQ GC +AL+ F M V PN +T +GVLTACSH GLV+EGL Y M+ EY
Sbjct: 497 VISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEY 556
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ PT +HC+CVVDLL RAG + +AE FI + V+W+SLLAS
Sbjct: 557 ALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLAS 603
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/509 (25%), Positives = 236/509 (46%), Gaps = 56/509 (11%)
Query: 18 ALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHIL 77
+L + ++ + +R TYA ++ACS L+ G+ VH +L V + N ++
Sbjct: 97 SLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSNSLV 156
Query: 78 NMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQF 137
+MY +CG + AR FD +R+ VSW A+++G + ++D ++++ M +SG+ F
Sbjct: 157 SMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSF 216
Query: 138 TFGSIIKACSGLGSVCL--GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
GS+IK C+G + +H V+K+ S + +A++ MY K + +A +F
Sbjct: 217 ALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFK 276
Query: 196 GIARKDVTSWGSMIAAFSK----LGYEL--EALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
+ +V + +MIA + +G ++ EAL ++E+ G +P EF F SV AC+
Sbjct: 277 SVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRG-MEPTEFTFSSVIRACN 335
Query: 250 -----NFARIL-----------------------------------FNEIDSPDLASWNA 269
F + + F + D+ +W A
Sbjct: 336 LAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTA 395
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
+I+G + A++LF E+ L PD T+ S++ AC G Q+ + K G
Sbjct: 396 MISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSG 455
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
F + N+ + MYA+ + A+ F+E+ ++ D VSW+++I++ QH A + R F
Sbjct: 456 FGRFTAMGNSCIHMYARSGDVHAAVRRFQEM-ESHDIVSWSAVISSHAQHGCARDALRFF 514
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
+ M+ +++ P+ ITF V+ AC+ + E + + L+ + ++D+ +
Sbjct: 515 NEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGR 574
Query: 449 CGSLGSARKLFN---FMENPDVVSWSSLI 474
G L A F + P V W SL+
Sbjct: 575 AGRLADAEAFIRDSIFHDEP--VIWRSLL 601
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 197/433 (45%), Gaps = 40/433 (9%)
Query: 3 NDYVSSLCKQ------NLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLG 54
N ++ LC+ ++ EAL Y Q+ + P+ T++ +I AC+ ++ G
Sbjct: 287 NAMIAGLCRDEAAVGTDVLREALSLYSEVQSRG---MEPTEFTFSSVIRACNLAGDIEFG 343
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
+++H +L Q D + + ++++Y G +ED F +P+++VV+WTAMI+GC QN
Sbjct: 344 KQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQN 403
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
A+ L+ ++L +G+ P FT S++ AC+ L G Q+ KS G
Sbjct: 404 ELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMG 463
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
N+ I MY + + A F + D+ SW ++I++ ++ G +AL FNEM+
Sbjct: 464 NSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMV-DAKV 522
Query: 235 QPNEFIFGSVFSACSN---------FARILFNEID-SPDLASWNALIAGVASHSNANEAM 284
PNE F V +ACS+ + + E SP + ++ + +A
Sbjct: 523 VPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAE 582
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
+ +RD + + SLL +C + +G V I+++ S+ N + +Y
Sbjct: 583 AF---IRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIMELQPSSSASYVN-LYNIY 638
Query: 345 ---AKCSVLCNALLVFKELG-KNADSVSW-------NSIIAACLQHNQAEELFRLFSRML 393
+ S+ V KE G K +SW +S +A H ++ ++ + ML
Sbjct: 639 LDAGELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYSKLAEML 698
Query: 394 ASQIKPDHITFND 406
+ K D +T D
Sbjct: 699 S---KIDKLTATD 708
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 164/500 (32%), Positives = 260/500 (52%), Gaps = 41/500 (8%)
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
A+ ++ M +G P TF S++K C+ G + GR +HA + S +A AL
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY K R DAR VF + +D +W +++A +++ G A+ M +P+
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 240 IFGSV--------------------------------------FSACSNF--ARILFNEI 259
SV + C + AR++F+ +
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
+ + SWNA+I G A + ++ EA++LF+ M + + ++V + L AC L +GM
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+VH ++++G DSNV V NA++TMY+KC + A VF EL + VSWN++I C Q+
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRT-QVSWNAMILGCAQN 341
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+E+ RLF+RM +KPD T V+ A A ++ +H Y + L DV+V+
Sbjct: 342 GCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVL 401
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
L+D+Y KCG + AR LFN V++W+++I GY G G A++LF M+S+G+
Sbjct: 402 TALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIV 461
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
PN T + VL+ACSH GLV+EG + M+ +YG+ P EH +VDLL RAG + EA
Sbjct: 462 PNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWA 521
Query: 560 FINQMACDADIVVWKSLLAS 579
FI +M D + V+ ++L +
Sbjct: 522 FIQKMPMDPGLSVYGAMLGA 541
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 189/416 (45%), Gaps = 41/416 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L+ C++ L GR VH + + + + NMY KC DAR FD+M
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLG 155
P R+ V+W A++AG ++N A+++ ++M + G P T S++ AC+ ++
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R+ HA I+S + A++ Y K I AR VF + K+ SW +MI +++
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFG--------------------------------- 242
G EAL FN M+ G + +
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300
Query: 243 ----SVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+++S C + A +F+E+D SWNA+I G A + + +A+ LF+ M+ +
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD T+ S++ A Q +H Y I++ D +V V A++ MYAKC + A ++
Sbjct: 361 PDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARIL 420
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
F + ++WN++I H + LF M + I P+ TF V+ AC+
Sbjct: 421 FNS-ARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACS 475
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 128/252 (50%), Gaps = 2/252 (0%)
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
S+ A++ F M P T SLL C R L G VH+ + G DS
Sbjct: 38 SDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAA 97
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ- 396
A+ MYAKC +A VF + D V+WN+++A ++ A + RM +
Sbjct: 98 TALANMYAKCRRPADARRVFDRMPVR-DRVAWNALVAGYARNGLARMAMEMVVRMQEEEG 156
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
+PD IT V+ ACA +L + H + ++GL V V ++D Y KCG + +AR
Sbjct: 157 ERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAAR 216
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
+F++M + VSW+++I GYAQ G EAL LF RM GV V+++ L AC +G
Sbjct: 217 VVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELG 276
Query: 517 LVEEGLHLYRIM 528
++EG+ ++ ++
Sbjct: 277 CLDEGMRVHELL 288
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 164/369 (44%), Gaps = 42/369 (11%)
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
+ H + S + V + IL+ Y KCG + AR+ FD MP +N VSW AMI G +QN
Sbjct: 182 EAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNG 241
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+A+ L+ +M++ GV + + ++AC LG + G ++H +++ S++ N
Sbjct: 242 DSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMN 301
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
ALI MY+K R+ A +VF + R+ SW +MI ++ G +A+ F M +
Sbjct: 302 ALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENV-K 360
Query: 236 PNEFIFGSVFSACS----------------------------------------NFARIL 255
P+ F SV A + N ARIL
Sbjct: 361 PDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARIL 420
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
FN + +WNA+I G SH A+ LF EM+ ++P+ T S+L AC +
Sbjct: 421 FNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLV 480
Query: 316 YQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
+G + + + + G + + ++ + + L A +++ + + +++
Sbjct: 481 DEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLG 540
Query: 375 ACLQHNQAE 383
AC H E
Sbjct: 541 ACKLHKNVE 549
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 176/393 (44%), Gaps = 34/393 (8%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+ AC L L G +VH+ ++ +V + N ++ MY KC ++ A FD++ +R
Sbjct: 269 LQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ 328
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
VSW AMI GC+QN DA++L+ +M V P FT S+I A + + R +H +
Sbjct: 329 VSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGY 388
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
I+ + ALI MY K R+ AR +F+ + V +W +MI + G+ A
Sbjct: 389 SIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAA 448
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFNEID-----SPDLASWNALI 271
+ F EM G PNE F SV SACS + R F + P + + ++
Sbjct: 449 VELFEEMKSIGIV-PNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMV 507
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVH-SLLCACIGRLTLYQGMQVHSYIIKMGF 330
+ +EA + +M + GL+V+ ++L AC + + I ++G
Sbjct: 508 DLLGRAGKLDEAWAFIQKMP----MDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGP 563
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA--DSVSWNSI---------IAACLQH 379
V + +YA S+ + V + KN + W+ I + H
Sbjct: 564 QEGVYHV-LLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNH 622
Query: 380 NQAEELFRLFSRMLASQIK-----PDHITFNDV 407
QA+E++ ++++ +IK PD + +DV
Sbjct: 623 QQAKEIYSRLAKLI-EEIKAVGYVPDTDSIHDV 654
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
C QN +E V N++ T +I A + + R +H + + D
Sbjct: 338 CAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQD 397
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
V + +++MY KCG + AR+ F+ +R+V++W AMI G + A++L+ +M
Sbjct: 398 VYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKS 457
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
G++P + TF S++ ACS G V GR+
Sbjct: 458 IGIVPNETTFLSVLSACSHAGLVDEGRE 485
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 160/494 (32%), Positives = 267/494 (54%), Gaps = 41/494 (8%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F+ +P+ N + W M G + + A+KLY+ M+ G++P FTF ++K+C+ +
Sbjct: 32 FETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTF 91
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+Q+H HV+K L +LI+MY + R+ DA+ VF + +DV S+ ++I +
Sbjct: 92 KEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGY 151
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
+ GY +E+ A+ +F+EI D+ SWNA+I+
Sbjct: 152 ASRGY-IES------------------------------AQKMFDEIPIKDVVSWNAMIS 180
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A N +A+ LF EM + PD T+ +++ AC ++ G QVHS+I GF S
Sbjct: 181 GYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGS 240
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N+ + NA++ +Y+KC + A + + L N D +SWN++I N +E LF M
Sbjct: 241 NLKIVNALIDLYSKCGEVETACELLEGLS-NKDVISWNTLIGGYTHMNLYKEALLLFQEM 299
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG------LMDIY 446
L S P+ +T ++ ACA + ++++ +H YI K V V N L+D+Y
Sbjct: 300 LRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKK--LKGVVVTNASSLRTSLIDMY 357
Query: 447 IKCGSLGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
KCG + +A ++ + N + +W+++I G+A G + A +F+RMR G+ P+ +T
Sbjct: 358 AKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITF 417
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
VG+L+ACSH G+++ G +++R M +Y I P EH C++DLL +G EAE+ IN M
Sbjct: 418 VGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMP 477
Query: 566 CDADIVVWKSLLAS 579
+ D V+W SLL +
Sbjct: 478 MEPDGVIWCSLLKA 491
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 186/382 (48%), Gaps = 35/382 (9%)
Query: 230 HHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
H+ Q EF S +A +F I P+ WN + G A S+ A+ L+
Sbjct: 6 HYAXSQLLEFCILSPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVV 65
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M LLP+ T LL +C T +G Q+H +++K+GFD ++ V ++++MYA+
Sbjct: 66 MISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGR 125
Query: 350 LCNALLVFKELGKN------------------------------ADSVSWNSIIAACLQH 379
L +A VF D VSWN++I+ +
Sbjct: 126 LEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAET 185
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
++ LF M+ + +KPD T V+ ACA+ S+E+ Q+H +I G ++ ++
Sbjct: 186 GNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIV 245
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
N L+D+Y KCG + +A +L + N DV+SW++LI GY EAL LF M G +
Sbjct: 246 NALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 305
Query: 500 PNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHC--SCVVDLLARAGCVH 555
PN VT++ +L AC+H+G ++ G +H+Y I + G++ T + ++D+ A+ G +
Sbjct: 306 PNDVTMLSILPACAHLGAIDIGRWIHVY-IDKKLKGVVVTNASSLRTSLIDMYAKCGDID 364
Query: 556 EAEDFINQMACDADIVVWKSLL 577
A + A + + W +++
Sbjct: 365 AAPQVSDSSAFNRSLSTWNAMI 386
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 200/448 (44%), Gaps = 92/448 (20%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK- 95
T+ L+ +C+ ++ + G+++H H+L D+ + +++MY + G LEDA+ FD+
Sbjct: 77 TFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRS 136
Query: 96 ------------------------------MPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+P ++VVSW AMI+G ++ A++L+
Sbjct: 137 SHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFK 196
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M+++ V P + T +++ AC+ GS+ LGRQ+H+ + GS+L NALI +Y+K
Sbjct: 197 EMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCG 256
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A + G++ KDV SW ++I ++ + EAL F EML G PN+ S+
Sbjct: 257 EVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSIL 315
Query: 246 SACSNFARILF----------------------------------NEIDSP--------- 262
AC++ I +ID+
Sbjct: 316 PACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAF 375
Query: 263 --DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC-------IGRL 313
L++WNA+I G A H AN A +FS MR + PD +T LL AC +GR
Sbjct: 376 NRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR- 434
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
+++ M+ Y I + ++ + + A + + D V W S++
Sbjct: 435 NIFRSMR-QDYNITPKLEH----YGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLL 489
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDH 401
AC H EL F++ L +I+P++
Sbjct: 490 KACKIHGNL-ELGESFAKKLI-KIEPEN 515
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 164/343 (47%), Gaps = 24/343 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + Y +AL + TN++ ST A ++SAC+ S++LGR+VH I
Sbjct: 176 NAMISGYAETGNYKKALELFK-EMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWIN 234
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ + N ++++Y KCG +E A + + ++V+SW +I G + +A+
Sbjct: 235 DHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALL 294
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA------ 176
L+ +ML+SG P T SI+ AC+ LG++ +GR +H ++ K G ++ NA
Sbjct: 295 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKG--VVVTNASSLRTS 352
Query: 177 LIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
LI MY K I A V A + +++W +MI F+ G A F+ M +G +
Sbjct: 353 LIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGI-E 411
Query: 236 PNEFIFGSVFSACS-----NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMS 285
P++ F + SACS + R +F + +P L + +I + EA
Sbjct: 412 PDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEE 471
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
+ + M + PDG+ SLL AC L G +IK+
Sbjct: 472 MINTM---PMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKI 511
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 183/584 (31%), Positives = 296/584 (50%), Gaps = 44/584 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T + + +CS+LR G + + S + VL + +++ Y KCG ++A F+ M
Sbjct: 118 TLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYM 177
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++VSWT M++ + + A++LY +M+Q+GV P +FTF ++ A S LG + G+
Sbjct: 178 NNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLG-LNYGK 236
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+HAH++ +L+ + AL+ MY K I DA V DV W ++I+ F++
Sbjct: 237 LVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSL 296
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------ARIL----------- 255
EA+ F+EM G PN F + + +ACS+ +R++
Sbjct: 297 KFREAITAFHEMETSGVV-PNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVG 355
Query: 256 --------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
F I SP++ SW +LIAG + H E++ +F M+ +
Sbjct: 356 NSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGV 415
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ T+ ++L AC +L Q ++H YIIK D++V V NA++ YA ++ +A
Sbjct: 416 RPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWH 475
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
V + K+ D +++ S+ Q E + + M ++ D + + A A +
Sbjct: 476 V-TSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIP 534
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+E QLHCY K+GL + V NGL+D+Y KCG + A + F + PD VSW+ LI
Sbjct: 535 IMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIF 594
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
G A G AL F MR GV P+ +T + VL ACSH GLV+ GL ++ M ++GI
Sbjct: 595 GLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIR 654
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P +H C+VDLL RAG + EA + I M D +++K+LL +
Sbjct: 655 PQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGA 698
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 172/588 (29%), Positives = 292/588 (49%), Gaps = 49/588 (8%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+I S ++S C+S RS++ G +H I+ Q D+ L N++L++YGKC + +AR
Sbjct: 13 KIEYSLLKDIVSFCNS-RSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQ 71
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD+MP R+V SWT +++ + +A++L+ ML SG P +FT + +++CS L
Sbjct: 72 LFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALRE 131
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
G + A V KS S+ + +ALI Y+K +A VF + D+ SW M+++
Sbjct: 132 FNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSS 191
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS----NFA----------RILFN 257
F + G +AL ++ M+ G PNEF F + +A S N+ RI N
Sbjct: 192 FVEAGSWSQALQLYHRMIQTGV-APNEFTFVKLLAASSFLGLNYGKLVHAHLMMWRIELN 250
Query: 258 EIDSP-------------------------DLASWNALIAGVASHSNANEAMSLFSEMRD 292
+ D+ W A+I+G EA++ F EM
Sbjct: 251 LVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMET 310
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS-VLC 351
++P+ T +L AC L L G Q+HS ++ G +++V V N+++ MY KCS ++
Sbjct: 311 SGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIE 370
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A+ F+ + + + +SW S+IA +H EE ++F M ++P+ T + ++GAC
Sbjct: 371 DAVRAFRGIA-SPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGAC 429
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ SL +LH YI K DV V N L+D Y G + A + + M++ DV++++
Sbjct: 430 GTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYT 489
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIME 529
SL Q G + AL + T M V + +L L+A + + ++E G LH Y +
Sbjct: 490 SLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSV-- 547
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ G+ + +VDL + GC+H+A ++ + D V W L+
Sbjct: 548 -KSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEIT-EPDAVSWNGLI 593
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 143/513 (27%), Positives = 243/513 (47%), Gaps = 49/513 (9%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VSS + +++AL Y T + T+ L++A SS L G+ VH H+++ +
Sbjct: 189 VSSFVEAGSWSQALQLY-HRMIQTGVAPNEFTFVKLLAA-SSFLGLNYGKLVHAHLMMWR 246
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ ++VL+ +++MY KC S+EDA + +V WTA+I+G +Q+ + +AI +
Sbjct: 247 IELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFH 306
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK-F 184
+M SGV+P FT+ I+ ACS + ++ LG+Q+H+ V+ + + + N+L+ MY K
Sbjct: 307 EMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCS 366
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ I DA F GIA +V SW S+IA FS+ G E E++ F M G +PN F ++
Sbjct: 367 NMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGV-RPNSFTLSTI 425
Query: 245 FSACSNF----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
AC I+ N D+ D+ NAL+ A ++A + S M+ R+
Sbjct: 426 LGACGTIKSLTQTRKLHGYIIKNNADN-DVVVGNALVDAYAGLGMVDDAWHVTSMMKHRD 484
Query: 295 LLP-------------------------------DGLTVHSLLCACIGRLTLYQGMQVHS 323
++ DG ++ S L A G + G Q+H
Sbjct: 485 VITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHC 544
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
Y +K G S + V N ++ +Y KC + +A F E+ + D+VSWN +I +
Sbjct: 545 YSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITE-PDAVSWNGLIFGLASNGHVS 603
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM-VTQLHCYITKTGLAFDVFVMNGL 442
F M + ++PD IT V+ AC+ ++M + K G+ + L
Sbjct: 604 SALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCL 663
Query: 443 MDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
+D+ + G L A + M PD + + +L+
Sbjct: 664 VDLLGRAGRLEEAMNVIETMPFKPDALIYKTLL 696
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 166/346 (47%), Gaps = 19/346 (5%)
Query: 240 IFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
++G F AR LF+E+ D+ASW L++ N EA+ LF M P+
Sbjct: 59 LYGKCFGVAE--ARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNE 116
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
T+ + L +C G + + + K GFDSN + +A++ Y+KC A VF E
Sbjct: 117 FTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVF-E 175
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
N D VSW ++++ ++ + +L+ RM+ + + P+ TF ++ A + + L
Sbjct: 176 YMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLG-LNY 234
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
+H ++ + ++ + L+D+Y KC S+ A K+ DV W+++I G+ Q
Sbjct: 235 GKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQ 294
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RI----MENEYGI 534
EA+ F M + GV PN T G+L ACS + ++ G ++ R+ +EN+ +
Sbjct: 295 SLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSV 354
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMA--CDADIVVWKSLLA 578
+ +VD+ + C + ED + +++ W SL+A
Sbjct: 355 ------GNSLVDMYMK--CSNMIEDAVRAFRGIASPNVISWTSLIA 392
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 142/270 (52%), Gaps = 14/270 (5%)
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
++ G+ +HS IIKMGF ++ + N +L++Y KC + A +F E+ D SW ++
Sbjct: 30 SVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEM-PCRDVASWTMLM 88
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
+A + EE LF ML S P+ T + + +C+ + T+ +TK+G
Sbjct: 89 SAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFD 148
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
+ + + L+D Y KCG A ++F +M N D+VSW+ ++ + + G +AL+L+ RM
Sbjct: 149 SNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRM 208
Query: 494 RSLGVSPNLVTLVGVLTACSHVG-----LVEEGLHLYRIMENEYGIIPTREHCSCVVDLL 548
GV+PN T V +L A S +G LV L ++RI N ++ T +VD+
Sbjct: 209 IQTGVAPNEFTFVKLLAASSFLGLNYGKLVHAHLMMWRIELNL--VLKT-----ALVDMY 261
Query: 549 ARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ + +A ++++ + D+ +W ++++
Sbjct: 262 CKCQSIEDAVK-VSKLTLEYDVFLWTAIIS 290
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 143/316 (45%), Gaps = 19/316 (6%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTY--AGLISACSSLRSLQLGRKVHDHILL 63
++ + L E++ + Q + +RP+++ + ++ AC +++SL RK+H +I+
Sbjct: 391 IAGFSEHGLEEESIKVFGAMQG---VGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIK 447
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
+ DVV+ N +++ Y G ++DA M R+V+++T++ +Q A+ +
Sbjct: 448 NNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNI 507
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
M + V F+ S + A +G+ + G+QLH + +KS GS + N L+ +Y K
Sbjct: 508 ITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGK 567
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
I DA F I D SW +I + G+ AL F +M G +P++
Sbjct: 568 CGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGV-EPDQITCLL 626
Query: 244 VFSACSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
V ACS+ F + P L + L+ + EAM++ M
Sbjct: 627 VLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETM--- 683
Query: 294 ELLPDGLTVHSLLCAC 309
PD L +LL AC
Sbjct: 684 PFKPDALIYKTLLGAC 699
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 193/621 (31%), Positives = 312/621 (50%), Gaps = 64/621 (10%)
Query: 15 YNEALVAYDFSQNN--------------TNIRIRPSTYAGLISACSSLRSLQLGRKVHDH 60
YN L +DFS+NN + + + T + + C L +GR+VH
Sbjct: 72 YNRLL--FDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQ 129
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
L S DV + +++MY K ED R FD+M +NVVSWT++++G ++N ++
Sbjct: 130 SLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEV 189
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
I L QM GV P FTF +++ A + + G Q+HA ++K+ NALI M
Sbjct: 190 IHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICM 249
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA------------------- 221
Y K + + DA VF + +D +W MI ++ +G+ LE
Sbjct: 250 YLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVF 309
Query: 222 -----LC------HFNEMLHHGAYQPNEFIFGS--------VFSACSNF--ARILFNEID 260
LC +F + LH G + N + F +S CS+ A LF+ D
Sbjct: 310 CTALKLCSQQRELNFTKQLHCGVVK-NGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMAD 368
Query: 261 SP-DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
+ ++ +W A+I G ++N +A+ LF +M + P+ T ++L L
Sbjct: 369 AAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL----S 424
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
Q+H+ IIK ++ V A+L Y K + + VF + D V+W++++ Q
Sbjct: 425 QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAK-DIVAWSAMLTGLAQT 483
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAK-MASLEMVTQLHCYITKTGLAFDVFV 438
+E+ +F +++ +KP+ TF+ V+ AC+ A++E Q+H K+G + + V
Sbjct: 484 RDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCV 543
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
+ L+ +Y K G++ SA K+F E D+VSW+S+I GY Q G +AL++F M++ G+
Sbjct: 544 SSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGL 603
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAE 558
+ VT +GVLTAC+H GLVEEG + IM +Y I EH SC+VDL +RAG +A
Sbjct: 604 PLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAM 663
Query: 559 DFINQMACDADIVVWKSLLAS 579
D IN M A +W++LLA+
Sbjct: 664 DIINGMPFPASPTIWRTLLAA 684
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/531 (23%), Positives = 236/531 (44%), Gaps = 56/531 (10%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FD+ P +++ + ++ S+N + +A+ L+ + SG+ T +K C L
Sbjct: 61 FDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQ 120
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
+GRQ+H +KS + +L+ MY K + D R +F + K+V SW S+++ +
Sbjct: 121 VVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGY 180
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------- 251
++ G E + N+M G PN F F +V A ++
Sbjct: 181 ARNGLNDEVIHLINQMQMEGV-NPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFT 239
Query: 252 -------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
A +F+ + D +WN +I G A+ E +F MR
Sbjct: 240 TFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRL 299
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ + L C + L Q+H ++K G++ + A++ Y+KCS +
Sbjct: 300 AGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDE 359
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A +F + V+W ++I +Q+N E+ LF +M ++P+H T++ V+
Sbjct: 360 AFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVL--AG 417
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
K +SL ++QLH I K V L+D Y+K G++ + ++F + D+V+WS+
Sbjct: 418 KPSSL--LSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSA 475
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC-SHVGLVEEGLHLYRIMENE 531
++ G AQ ++A+++F ++ GV PN T V+ AC S VE G ++
Sbjct: 476 MLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHAT---- 531
Query: 532 YGIIPTREHCSCV----VDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ + + CV + + ++ G + AE + + DIV W S++
Sbjct: 532 -AVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQE-ERDIVSWNSMIT 580
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 193/422 (45%), Gaps = 55/422 (13%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+++ + + + CS R L +++H ++ + + ++ ++ Y KC S+++A
Sbjct: 302 VKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAF 361
Query: 91 MGFDKM-PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F NVV+WTAMI G QN A+ L+ QM + GV P FT+ +++ +G
Sbjct: 362 KLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVL---AGK 418
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
S L QLHA +IK+ + AL+ Y K ++++ VF I KD+ +W +M+
Sbjct: 419 PSSLLS-QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAML 477
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL-------------- 255
++ +A+ F +++ G +PNE+ F SV +ACS+ A +
Sbjct: 478 TGLAQTRDSEKAMEVFIQLVKEGV-KPNEYTFSSVINACSSSAATVEHGKQIHATAVKSG 536
Query: 256 ---------------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
F + D+ SWN++I G H +A +A+ +F
Sbjct: 537 KSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQ 596
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKC 347
M+++ L D +T +L AC + +G + + +IK D + + ++ +Y++
Sbjct: 597 IMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRA 656
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
+ A+ + + A W +++AAC H EL +L + L S ++P ND
Sbjct: 657 GMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNL-ELGKLAAEKLVS-LQP-----NDA 709
Query: 408 MG 409
+G
Sbjct: 710 VG 711
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 168/371 (45%), Gaps = 28/371 (7%)
Query: 221 ALCHFNEMLH-HGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSN 279
++ H LH HG F S+ S +A LF+E D++ +N L+ + +++
Sbjct: 26 SIHHIKHFLHPHGFLYHQSLPFISLPSR-PRYAHQLFDETPLKDISHYNRLLFDFSRNNH 84
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
EA+ LF ++ L DGLT+ L C G QVH +K GF +V V +
Sbjct: 85 DREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTS 144
Query: 340 ILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
++ MY K + +F E+G KN VSW S+++ ++ +E+ L ++M +
Sbjct: 145 LVDMYMKTEDFEDGRGIFDEMGIKNV--VSWTSLLSGYARNGLNDEVIHLINQMQMEGVN 202
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
P+ TF V+GA A + +E Q+H I K G F FV N L+ +Y+K +G A +
Sbjct: 203 PNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAV 262
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS----- 513
F+ M D V+W+ +I GYA G E ++F RMR GV + L CS
Sbjct: 263 FDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQREL 322
Query: 514 ------HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
H G+V+ G + + ++ T CS V EA +
Sbjct: 323 NFTKQLHCGVVKNGYEFAQDIRT--ALMVTYSKCS----------SVDEAFKLFSMADAA 370
Query: 568 ADIVVWKSLLA 578
++V W +++
Sbjct: 371 HNVVTWTAMIG 381
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 164/500 (32%), Positives = 260/500 (52%), Gaps = 41/500 (8%)
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
A+ ++ M +G P TF S++K C+ G + GR +HA + S +A AL
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY K R DAR VF + +D +W +++A +++ G A+ M +P+
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 240 IFGSV--------------------------------------FSACSNF--ARILFNEI 259
SV + C + AR++F+ +
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
+ + SWNA+I G A + ++ EA++LF+ M + + ++V + L AC L +GM
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+VH ++++G DSNV V NA++TMY+KC + A VF EL + VSWN++I C Q+
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRT-QVSWNAMILGCAQN 341
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+E+ RLF+RM +KPD T V+ A A ++ +H Y + L DV+V+
Sbjct: 342 GCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVL 401
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
L+D+Y KCG + AR LFN V++W+++I GY G G A++LF M+S+G+
Sbjct: 402 TALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIV 461
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
PN T + VL+ACSH GLV+EG + M+ +YG+ P EH +VDLL RAG + EA
Sbjct: 462 PNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWA 521
Query: 560 FINQMACDADIVVWKSLLAS 579
FI +M D + V+ ++L +
Sbjct: 522 FIQKMPMDPGLSVYGAMLGA 541
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 189/416 (45%), Gaps = 41/416 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L+ C++ L GR VH + + + + NMY KC DAR FD+M
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLG 155
P R+ V+W A++AG ++N A+++ ++M + G P T S++ AC+ ++
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R+ HA I+S + A++ Y K I AR VF + K+ SW +MI +++
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFG--------------------------------- 242
G EAL FN M+ G + +
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300
Query: 243 ----SVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+++S C + A +F+E+D SWNA+I G A + + +A+ LF+ M+ +
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD T+ S++ A Q +H Y I++ D +V V A++ MYAKC + A ++
Sbjct: 361 PDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARIL 420
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
F + ++WN++I H + LF M + I P+ TF V+ AC+
Sbjct: 421 FNS-ARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACS 475
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 133/262 (50%), Gaps = 2/262 (0%)
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
+A + A+ S+ A++ F M P T SLL C R L G VH+ +
Sbjct: 28 HARLRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAA 87
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
G DS A+ MYAKC +A VF + D V+WN+++A ++ A
Sbjct: 88 RGIDSEALAATALANMYAKCRRPADARRVFDRMPVR-DRVAWNALVAGYARNGLARMAME 146
Query: 388 LFSRMLASQ-IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
+ RM + +PD IT V+ ACA +L + H + ++GL V V ++D Y
Sbjct: 147 MVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAY 206
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KCG + +AR +F++M + VSW+++I GYAQ G EAL LF RM GV V+++
Sbjct: 207 CKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVL 266
Query: 507 GVLTACSHVGLVEEGLHLYRIM 528
L AC +G ++EG+ ++ ++
Sbjct: 267 AALQACGELGCLDEGMRVHELL 288
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 164/369 (44%), Gaps = 42/369 (11%)
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
+ H + S + V + IL+ Y KCG + AR+ FD MP +N VSW AMI G +QN
Sbjct: 182 EAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNG 241
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+A+ L+ +M++ GV + + ++AC LG + G ++H +++ S++ N
Sbjct: 242 DSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMN 301
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
ALI MY+K R+ A +VF + R+ SW +MI ++ G +A+ F M +
Sbjct: 302 ALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENV-K 360
Query: 236 PNEFIFGSVFSACS----------------------------------------NFARIL 255
P+ F SV A + N ARIL
Sbjct: 361 PDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARIL 420
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
FN + +WNA+I G SH A+ LF EM+ ++P+ T S+L AC +
Sbjct: 421 FNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLV 480
Query: 316 YQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
+G + + + + G + + ++ + + L A +++ + + +++
Sbjct: 481 DEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLG 540
Query: 375 ACLQHNQAE 383
AC H E
Sbjct: 541 ACKLHKNVE 549
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 176/393 (44%), Gaps = 34/393 (8%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+ AC L L G +VH+ ++ +V + N ++ MY KC ++ A FD++ +R
Sbjct: 269 LQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ 328
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
VSW AMI GC+QN DA++L+ +M V P FT S+I A + + R +H +
Sbjct: 329 VSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGY 388
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
I+ + ALI MY K R+ AR +F+ + V +W +MI + G+ A
Sbjct: 389 SIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAA 448
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFNEID-----SPDLASWNALI 271
+ F EM G PNE F SV SACS + R F + P + + ++
Sbjct: 449 VELFEEMKSIGIV-PNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMV 507
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVH-SLLCACIGRLTLYQGMQVHSYIIKMGF 330
+ +EA + +M + GL+V+ ++L AC + + I ++G
Sbjct: 508 DLLGRAGKLDEAWAFIQKMP----MDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGP 563
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA--DSVSWNSI---------IAACLQH 379
V + +YA S+ + V + KN + W+ I + H
Sbjct: 564 QEGVYHV-LLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNH 622
Query: 380 NQAEELFRLFSRMLASQIK-----PDHITFNDV 407
QA+E++ ++++ +IK PD + +DV
Sbjct: 623 QQAKEIYSRLAKLI-EEIKAVGYVPDTDSIHDV 654
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
C QN +E V N++ T +I A + + R +H + + D
Sbjct: 338 CAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQD 397
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
V + +++MY KCG + AR+ F+ +R+V++W AMI G + A++L+ +M
Sbjct: 398 VYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKS 457
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
G++P + TF S++ ACS G V GR+
Sbjct: 458 IGIVPNETTFLSVLSACSHAGLVDEGRE 485
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 173/523 (33%), Positives = 264/523 (50%), Gaps = 42/523 (8%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FD++ N W M+ Q+ A+ LY M+++ V P +T+ +++AC+
Sbjct: 98 FDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLE 157
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+++H HV+K S + QN LI MY + DAR +F D SW S++A +
Sbjct: 158 FGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGY 217
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFI-----FGSVFSACSNFARILFNEIDSPDLASW 267
K G EA F++M N I G V A LFNE+D D+ SW
Sbjct: 218 VKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWK-----LFNEMDEKDMVSW 272
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
+ALI+G + EA+ +F EM + D + V S+L AC + G +H +I+
Sbjct: 273 SALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIR 332
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL---------- 377
MG +S V + NA++ MY+ + +A +F N D +SWNS+I+ C+
Sbjct: 333 MGIESYVNLQNALIHMYSGSGEIMDAQKLFNG-SHNLDQISWNSMISGCMKCGSVEKARA 391
Query: 378 ---------------------QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
QH+ E LF M QI+PD V+ AC +A+
Sbjct: 392 LFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAA 451
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L+ +H YI K GL +V + L+D+Y+KCG + +A ++FN ME V SW++LI+G
Sbjct: 452 LDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIG 511
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
A G + +L +F+ M++ GV PN +T +GVL AC H+GLV+EG + M ++GI P
Sbjct: 512 LAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEP 571
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H C+VDLL RAG ++EAE I M D+ W +LL +
Sbjct: 572 NVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGA 614
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 158/540 (29%), Positives = 247/540 (45%), Gaps = 105/540 (19%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLG-RKVHDHI 61
N + + + N +AL+ Y N N+ TY ++ AC+ +R L+ G +++HDH+
Sbjct: 110 NTMMRAYIQSNSAEKALLLYKLMVKN-NVGPDNYTYPLVVQACA-VRLLEFGGKEIHDHV 167
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDAR------------------------------- 90
L DV +QN ++NMY CG++ DAR
Sbjct: 168 LKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAK 227
Query: 91 MGFDKMPQRNV-------------------------------VSWTAMIAGCSQNYQEND 119
+ FD+MPQRN+ VSW+A+I+G QN +
Sbjct: 228 LIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEE 287
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
A+ ++I+M +G+ + S++ AC+ L V G+ +H VI+ S++ QNALI
Sbjct: 288 ALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIH 347
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY+ I+DA+ +F+G D SW SMI+ K G
Sbjct: 348 MYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCG----------------------- 384
Query: 240 IFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
AR LF+ + D+ SW+A+I+G A H +E ++LF EM+ ++ PD
Sbjct: 385 --------SVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDE 436
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+ S++ AC L QG VH+YI K G NV + +L MY KC + NAL VF
Sbjct: 437 TILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNG 496
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
+ + S SWN++I + E +FS M + + P+ ITF V+GAC M +
Sbjct: 497 MEEKGVS-SWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMG---L 552
Query: 420 VTQLHCY----ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
V + C+ I K G+ +V ++D+ + G L A KL M PDV +W +L+
Sbjct: 553 VDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALL 612
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 164/329 (49%), Gaps = 42/329 (12%)
Query: 250 NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+++ +F+ I++ + WN ++ ++A +A+ L+ M + PD T ++ AC
Sbjct: 92 DYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQAC 151
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSW 369
RL + G ++H +++K+GFDS+V V N ++ MYA C + +A +F E DSVSW
Sbjct: 152 AVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDE-SPVLDSVSW 210
Query: 370 NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
NSI+A ++ EE +F +M I +AS M+ L
Sbjct: 211 NSILAGYVKKGDVEEAKLIFDQMPQRNI----------------VASNSMIVLLG----- 249
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
K G + A KLFN M+ D+VSWS+LI GY Q G +EAL +
Sbjct: 250 ------------------KMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVM 291
Query: 490 FTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLA 549
F M + G+ + V +V VL+AC+H+ +V+ G ++ ++ GI + ++ + +
Sbjct: 292 FIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLV-IRMGIESYVNLQNALIHMYS 350
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLLA 578
+G + +A+ N + + D + W S+++
Sbjct: 351 GSGEIMDAQKLFNG-SHNLDQISWNSMIS 378
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 112/214 (52%), Gaps = 5/214 (2%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + + ++E L + Q IR + +ISAC+ L +L G+ VH +I +
Sbjct: 408 ISGYAQHDCFSETLALFHEMQLG-QIRPDETILVSVISACTHLAALDQGKWVHAYIRKNG 466
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ +V+L +L+MY KCG +E+A F+ M ++ V SW A+I G + N ++ ++
Sbjct: 467 LKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFS 526
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG--SHLIAQNALIAMYTK 183
+M +GV+P + TF ++ AC +G V GR A +I+ +HG ++ ++ + +
Sbjct: 527 EMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIE-KHGIEPNVKHYGCMVDLLGR 585
Query: 184 FDRILDARNVFSGIAR-KDVTSWGSMIAAFSKLG 216
+ +A + + DV +WG+++ A K G
Sbjct: 586 AGLLNEAEKLIESMPMAPDVATWGALLGACKKHG 619
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 184/567 (32%), Positives = 294/567 (51%), Gaps = 43/567 (7%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
L LG+ +H + Q D N+++N+YGK L DA+ FD+M RN ++WT +I G
Sbjct: 94 LMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKG 153
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
Q ++ +M G + T I++AC L ++ G Q+H VIK
Sbjct: 154 HLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDED 213
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
+ +LI+MY++ + A V+S +A KDV MI+ + K G +A+ F +L
Sbjct: 214 VFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLG 273
Query: 231 HGAYQPNEFIFGSVFSACS-----NFARIL------------------------------ 255
G +PN++ F +V SAC+ R+L
Sbjct: 274 SG-LEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLE 332
Query: 256 -----FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
F + +L SW AL++G + N +A+ FS++ + + D +LL C
Sbjct: 333 EAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCS 392
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
L G+Q+H +++K+G+ +V V A++ +YAKC L +A LVF L + + VS+N
Sbjct: 393 ECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSL-LDKNIVSFN 451
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
+I++ + ++ E+ LFS++ + IKPD +TF ++ A A L LH YI KT
Sbjct: 452 AILSGYIGADE-EDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKT 510
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
G + V N ++ +Y KCGS+G A +LF M D +SW+++I YA G G +AL LF
Sbjct: 511 GFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQGRKALILF 570
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
M+ P+ +T++ VL ACS+ GL+EEG L+ ME++YGI P EH +C+VDLL R
Sbjct: 571 EEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHFACMVDLLGR 630
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLL 577
AG + EA FIN+ ++W++L+
Sbjct: 631 AGYLSEAMSFINRSPFSGSPLLWRTLV 657
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 235/485 (48%), Gaps = 63/485 (12%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++ AC SL +L G ++H ++ DV + +++MY +CG L A + + ++
Sbjct: 185 ILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKD 244
Query: 101 VVSWTAMI-----AGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
V MI AGC + AI +++ +L SG+ P +TF ++I AC+G V +
Sbjct: 245 VRCLNFMISEYGKAGCGEK-----AIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVL 299
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R LH IK G + NA++++Y K + +A F G+ +++ SW ++++ + K
Sbjct: 300 RVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKN 359
Query: 216 GYELEALCHFNEMLHHG-----------------------AYQPNEFIFG---------- 242
G +AL F+++L G Q + F+
Sbjct: 360 GNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVG 419
Query: 243 ----SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+++ C AR++F+ + ++ S+NA+++G ++ +AM+LFS++R ++
Sbjct: 420 TALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYIG-ADEEDAMALFSQLRLADIK 478
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD +T LL + L +G +H+YIIK GF++N V NA++TMYAKC + +A +
Sbjct: 479 PDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQL 538
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + DS+SWN++I+A H Q + LF M + PD IT V+ AC+
Sbjct: 539 FYSM-NYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGL 597
Query: 417 LEMVTQLHCYI----TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN---FMENPDVVS 469
LE + C +K G+ ++ ++D+ + G L A N F +P +
Sbjct: 598 LE---EGFCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFSGSP--LL 652
Query: 470 WSSLI 474
W +L+
Sbjct: 653 WRTLV 657
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/540 (21%), Positives = 240/540 (44%), Gaps = 73/540 (13%)
Query: 89 ARMGFDKMPQRNV------VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI 142
A GF+ P N + ++M+ C+ + +N + Q+LQ +
Sbjct: 41 ANTGFNSYPGHNAQDPNSKTTHSSMVY-CNSDSDQNPLFNDWPQLLQISI---------- 89
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
G G + LG+ +HA + K + + N L+ +Y KF+++ DA++VF + ++
Sbjct: 90 -----GSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNT 144
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------- 251
+W ++I ++ ++E++ ++ + NE + AC +
Sbjct: 145 ITWTTLIKGHLQVN-DVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHG 203
Query: 252 -----------------------------ARILFNEIDSPDLASWNALIAGVASHSNANE 282
A +++ + D+ N +I+ +
Sbjct: 204 FVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEK 263
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
A+ +F + L P+ T +++ AC G + + +H IK G + V NAI++
Sbjct: 264 AIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVS 323
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
+Y K +L A F +G+ + VSW ++++ +++ ++ FS++L + D
Sbjct: 324 VYVKHGMLEEAEKSFCGMGER-NLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSC 382
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
F ++ C++ +L + Q+H ++ K G DV V L+D+Y KC L SAR +F+ +
Sbjct: 383 CFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSL 442
Query: 463 ENPDVVSWSSLILGYAQFGCGDE-ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
+ ++VS+++++ GY G +E A+ LF+++R + P+ VT +L+ + + +G
Sbjct: 443 LDKNIVSFNAILSGY--IGADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKG 500
Query: 522 --LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
LH Y I + G + V+ + A+ G + +A M D + W +++++
Sbjct: 501 KCLHAYII---KTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNY-LDSISWNAVISA 556
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 172/384 (44%), Gaps = 43/384 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +ISAC+ +++ R +H + C ++ + N I+++Y K G LE+A F M
Sbjct: 282 TFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGM 341
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+RN+VSWTA+++G +N A++ + Q+L+ GV F +++ CS ++ LG
Sbjct: 342 GERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGL 401
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H V+K + + ALI +Y K ++ AR VF + K++ S+ ++++ + +G
Sbjct: 402 QIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGY--IG 459
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
+ E L +P+ F + S ++ A +
Sbjct: 460 ADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVG 519
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
LF ++ D SWNA+I+ A H +A+ LF EM+ E +
Sbjct: 520 NAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFV 579
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD +T+ S+L AC L +G + + + K G + ++ + + L A+
Sbjct: 580 PDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMS 639
Query: 356 VFKELGKNADSVSWNSIIAACLQH 379
+ + W +++ C H
Sbjct: 640 FINRSPFSGSPLLWRTLVHVCKLH 663
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 170/539 (31%), Positives = 278/539 (51%), Gaps = 44/539 (8%)
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
+ G ++ G D ++S +++G Q + +K ++ M++S + Q TF
Sbjct: 268 EAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFIL 327
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
++ L S+ LG+Q+H +K L N+LI MY K +I AR VF+ ++ +D
Sbjct: 328 VLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERD 387
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------- 251
+ SW S+IA ++ E+EA+C F ++L G +P+ + SV A S+
Sbjct: 388 LISWNSVIAGIAQSDLEVEAVCLFMQLLRCG-LKPDHYTMTSVLKAASSLPEGLSLSKQI 446
Query: 252 -------------------------------ARILFNEIDSPDLASWNALIAGVASHSNA 280
A +LF ++ DL +WNA+++G +
Sbjct: 447 HVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDG 505
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
++ + LF+ M + D T+ ++L C + QG QVH+Y IK G+D ++ V + I
Sbjct: 506 HKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGI 565
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
L MY KC + A F + D V+W ++I+ C+++ + E +FS+M + PD
Sbjct: 566 LDMYVKCGDMSAAQFAFDSI-PVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPD 624
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T + A + + +LE Q+H K D FV L+D+Y KCGS+ A LF
Sbjct: 625 EFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFK 684
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
+E ++ +W+++++G AQ G G EAL+LF +M SLG+ P+ VT +GVL+ACSH GLV E
Sbjct: 685 RIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSE 744
Query: 521 GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
R M +YGI P EH SC+ D L RAG V EAE+ I+ M+ +A ++++LLA+
Sbjct: 745 AYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAA 803
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 158/555 (28%), Positives = 264/555 (47%), Gaps = 23/555 (4%)
Query: 40 GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR 99
G + S L LG+ H IL + P+ L N++++MY KCGSL AR FDKMP+R
Sbjct: 51 GFLRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPER 110
Query: 100 NVVSWTAMIAGCSQNYQ---EN--DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
++VSW +++A +Q+ + EN +A L+ + Q V + T ++K C G VC
Sbjct: 111 DLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCA 170
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
H + K AL+ +Y KF ++ + R +F + +DV W M+ A+ +
Sbjct: 171 SESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLE 230
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFG--SVFSACSNFA---RILFNEIDS---PDLAS 266
+G++ EA+ + H PNE S S + A + N D+ ++ S
Sbjct: 231 MGFKEEAI-DLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEIIS 289
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
N +++G + + F +M + +L D +T +L + +L G QVH +
Sbjct: 290 RNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMAL 349
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
K+G D + V N+++ MY K + A VF + + D +SWNS+IA Q + E
Sbjct: 350 KLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSER-DLISWNSVIAGIAQSDLEVEAV 408
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMAS-LEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
LF ++L +KPDH T V+ A + + L + Q+H + KT D FV L+D
Sbjct: 409 CLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDA 468
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y + + A LF N D+V+W++++ GY Q G + L+LF M G + TL
Sbjct: 469 YSRNRCMKEAEVLFG-RNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTL 527
Query: 506 VGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
VL C + + +G +H Y I + G S ++D+ + G + A+ +
Sbjct: 528 ATVLKTCGFLFAINQGKQVHAYAI---KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDS 584
Query: 564 MACDADIVVWKSLLA 578
+ D V W +L++
Sbjct: 585 IPVPDD-VAWTTLIS 598
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 121/214 (56%), Gaps = 1/214 (0%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T A ++ C L ++ G++VH + + S D+ + + IL+MY KCG + A+ FD +
Sbjct: 526 TLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 585
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P + V+WT +I+GC +N +E A+ ++ QM GV+P +FT ++ KA S L ++ GR
Sbjct: 586 PVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGR 645
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+HA+ +K S +L+ MY K I DA +F I ++T+W +M+ ++ G
Sbjct: 646 QIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHG 705
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
EAL F +M G +P++ F V SACS+
Sbjct: 706 EGKEALQLFKQMESLG-IKPDKVTFIGVLSACSH 738
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 185/416 (44%), Gaps = 58/416 (13%)
Query: 33 IRPSTYA--GLISACSSL-RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
++P Y ++ A SSL L L +++H H + + D + +++ Y + +++A
Sbjct: 419 LKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEA 478
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
+ F + ++V+W AM++G +Q++ + ++L+ M + G FT +++K C L
Sbjct: 479 EVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFL 537
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
++ G+Q+HA+ IKS + L + ++ MY K + A+ F I D +W ++I
Sbjct: 538 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLI 597
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------- 249
+ + G E AL F++M G P+EF ++ A S
Sbjct: 598 SGCIENGEEERALHVFSQMRLMGVL-PDEFTIATLAKASSCLTALEQGRQIHANALKLNC 656
Query: 250 --------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
+ A LF I+ ++ +WNA++ G+A H EA+ LF +
Sbjct: 657 TSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQ 716
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGM--QVHSYIIKM----GFDSNVPVCNAILTM 343
M + PD +T +L AC + G+ + + YI M G + + +
Sbjct: 717 MESLGIKPDKVTFIGVLSACS-----HSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADA 771
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
+ ++ A + + A + + +++AAC E R+ +++L +++P
Sbjct: 772 LGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLL--ELEP 825
>gi|334186756|ref|NP_193809.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635629|sp|Q9SVH0.2|PP329_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g20770
gi|332658959|gb|AEE84359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 774
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 179/594 (30%), Positives = 305/594 (51%), Gaps = 20/594 (3%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N+ +S L ++ +ALV Y + + R T A ++SACS + G + H +
Sbjct: 107 NNMISVLVRKGFEEKALVVYKRMVCDGFLPSR-FTLASVLSACSKVLDGVFGMRCHGVAV 165
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMG-FDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ ++ + N +L+MY KCG + D + F+ + Q N VS+TA+I G ++ + +A+
Sbjct: 166 KTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAV 225
Query: 122 KLYIQMLQSGVMPGQFTFGSII------KACSGLGSVC---LGRQLHAHVIKSEHGSHLI 172
+++ M + GV +I+ + C L + LG+Q+H ++ G L
Sbjct: 226 QMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLH 285
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
N+L+ +Y K + A +F+ + +V SW MI F + Y + F +
Sbjct: 286 LNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ-EYRSDKSVEFLTRMRDS 344
Query: 233 AYQPNEFIFGSVFSAC-----SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
+QPNE SV AC R +F+ I P +++WNA+++G +++ + EA+S F
Sbjct: 345 GFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNF 404
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
+M+ + L PD T+ +L +C L G Q+H +I+ N + + ++ +Y++C
Sbjct: 405 RQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSEC 464
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE-ELFRLFSRMLASQIK-PDHITFN 405
+ + +F + D WNS+I+ +HN + + LF RM + + P+ +F
Sbjct: 465 EKMEISECIFDDCINELDIACWNSMISG-FRHNMLDTKALILFRRMHQTAVLCPNETSFA 523
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
V+ +C+++ SL Q H + K+G D FV L D+Y KCG + SAR+ F+ +
Sbjct: 524 TVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRK 583
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
+ V W+ +I GY G GDEA+ L+ +M S G P+ +T V VLTACSH GLVE GL +
Sbjct: 584 NTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEIL 643
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M+ +GI P +H C+VD L RAG + +AE + V+W+ LL+S
Sbjct: 644 SSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSS 697
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/547 (23%), Positives = 251/547 (45%), Gaps = 39/547 (7%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
RKV D + + DV N L K G L +A FD MP+R+VVSW MI+ +
Sbjct: 61 RKVFDEMSVR----DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRK 116
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
E A+ +Y +M+ G +P +FT S++ ACS + G + H +K+ ++
Sbjct: 117 GFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVG 176
Query: 175 NALIAMYTKFDRILD-ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA 233
NAL++MY K I+D VF +++ + S+ ++I ++ LEA+ F M G
Sbjct: 177 NALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGV 236
Query: 234 YQPNEFIFGSVFS------ACSNFARILFNEIDSP------------DLASWNALIAGVA 275
Q + ++ S C + + I NE+ DL N+L+ A
Sbjct: 237 -QVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYA 295
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM---GFDS 332
+ + N A +F+EM + ++ + + +G Y+ + ++ +M GF
Sbjct: 296 KNKDMNGAELIFAEMPEVNVVSWNIMI-------VGFGQEYRSDKSVEFLTRMRDSGFQP 348
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N C ++L + + +F + + + S +WN++++ + EE F +M
Sbjct: 349 NEVTCISVLGACFRSGDVETGRRIFSSIPQPSVS-AWNAMLSGYSNYEHYEEAISNFRQM 407
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
+KPD T + ++ +CA++ LE Q+H + +T ++ + +++GL+ +Y +C +
Sbjct: 408 QFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKM 467
Query: 453 GSARKLFNFMENP-DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV-SPNLVTLVGVLT 510
+ +F+ N D+ W+S+I G+ +AL LF RM V PN + VL+
Sbjct: 468 EISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLS 527
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
+CS + + G + ++ G + + + D+ + G + A F + + +
Sbjct: 528 SCSRLCSLLHGRQFHGLVVKS-GYVSDSFVETALTDMYCKCGEIDSARQFFDAVL-RKNT 585
Query: 571 VVWKSLL 577
V+W ++
Sbjct: 586 VIWNEMI 592
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 31/224 (13%)
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCS-----------------VLCNALLVFK-- 358
G +H +I++MG S+ +CN +L +Y +C NA L F+
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 359 --ELGK---------NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
+LG+ D VSWN++I+ ++ E+ ++ RM+ P T V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL-GSARKLFNFMENPD 466
+ AC+K+ + H KTGL ++FV N L+ +Y KCG + ++F + P+
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
VS++++I G A+ EA+++F M GV + V L +L+
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 31/124 (25%)
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKC-------------------------------GS 451
+H +I + G+ D ++ N L+D+YI+C G
Sbjct: 28 IHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGD 87
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
LG A ++F+ M DVVSW+++I + G ++AL ++ RM G P+ TL VL+A
Sbjct: 88 LGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSA 147
Query: 512 CSHV 515
CS V
Sbjct: 148 CSKV 151
>gi|302801912|ref|XP_002982712.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
gi|300149811|gb|EFJ16465.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
Length = 734
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 176/586 (30%), Positives = 301/586 (51%), Gaps = 55/586 (9%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+A ++AC+ L L+ GR++H +L S+ DVV+QN ++ MY +CGS+ + FD M
Sbjct: 115 FASALAACAGLGDLEQGREIHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAM 174
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P++N+VSW AMI+ Q A++LY +M + + P F F S++ AC+ LG++ LG
Sbjct: 175 PRKNLVSWNAMISAFVQCDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLQLGS 234
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H + ++ +NALI MY+K + +A VFSG+A +DV +W SMIA +++LG
Sbjct: 235 SIHQRITSLGLQRDIVMENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLG 294
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+ EA ++ M P F ++ SACS
Sbjct: 295 FGSEAFAFYDRM-RRDCVSPTSATFVALLSACSTLEQGKHLHEEVKAFGFESITVVETAL 353
Query: 252 ------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
A LF ++ D SW+A++ A + +A++LF R+++ +G
Sbjct: 354 MFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLF-----RQMILEG 408
Query: 300 L-----TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ T S L AC + + I G D + +++ Y+KC + A
Sbjct: 409 MQLSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEAR 468
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F + ++ D ++W +I Q ++ LF RM ++PD +TF+ V+ AC
Sbjct: 469 KIFDRM-ESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQAC--- 524
Query: 415 ASLEMVTQLHCYI-TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
++LE ++H I G F+ NGL+++Y +CGS+ AR++F M+ +SWS++
Sbjct: 525 SNLEDGREVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESMDRSSRISWSAI 584
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
+ A+ G D+ + + M + GV P+ VTL+ +L +CSH GL +E H + + +++
Sbjct: 585 MTLCARHGQHDDIIDTYRLMVNEGVVPDGVTLIAILNSCSHAGLTDEACHYFTWIISDFE 644
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ EH C+VDLL RAG + EAE+ I+ M D+V ++LA+
Sbjct: 645 LPHLDEHYQCMVDLLCRAGRLDEAEELIS-MIDRPDVVTLNTMLAA 689
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 167/584 (28%), Positives = 296/584 (50%), Gaps = 55/584 (9%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S YA L+ C S R++ GR++HD + S L+ ++ MY KCG L DA+ FD+
Sbjct: 15 SRYARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDE 74
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ +N W MI+G +++ + +A++L+ +M + P F F S + AC+GLG + G
Sbjct: 75 IADKNDFVWNLMISGYARSGKNREALELFHKM---DIPPNGFIFASALAACAGLGDLEQG 131
Query: 156 RQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
R++H V++S S ++ QN+L+ MY + +L+ +F + RK++ SW +MI+AF +
Sbjct: 132 REIHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQ 191
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------------- 254
Y +AL ++ M +PN F+F S+ +AC++ +
Sbjct: 192 CDYPEQALELYHRMKRE-RLEPNGFVFASLLTACASLGNLQLGSSIHQRITSLGLQRDIV 250
Query: 255 --------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+F+ + + D+ +W ++IAG A +EA + + MR
Sbjct: 251 MENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDRMRRDC 310
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ P T +LL AC TL QG +H + GF+S V A++ MY++C L +A
Sbjct: 311 VSPTSATFVALLSACS---TLEQGKHLHEEVKAFGFESITVVETALMFMYSRCGSLEDAE 367
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F ++ + D VSW++++ + Q + LF +M+ ++ TF + AC+
Sbjct: 368 FLFAKM-QQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLK 426
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+ + I +G+ + L+ Y KCG + ARK+F+ ME+ DV++W+ +I
Sbjct: 427 RDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRMESRDVLTWTVMI 486
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYG 533
GYAQ G AL+LF RM+ GV P+ VT VL ACS+ +E+G ++ RI+ + G
Sbjct: 487 KGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSN---LEDGREVHARILAAQGG 543
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ + + ++++ AR G + +A M + I W +++
Sbjct: 544 KM-SDFLGNGLINMYARCGSMRDARQIFESMDRSSRI-SWSAIM 585
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 188/442 (42%), Gaps = 82/442 (18%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
+EA YD + + + +T+ L+SACS+L + G+ +H+ + + V++
Sbjct: 297 SEAFAFYDRMRRDC-VSPTSATFVALLSACSTL---EQGKHLHEEVKAFGFESITVVETA 352
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
++ MY +CGSLEDA F KM Q++ VSW+AM+ +Q A+ L+ QM+ G+
Sbjct: 353 LMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLS 412
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
TF S ++ACS L + + + S + L++ Y+K + +AR +F
Sbjct: 413 LPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFD 472
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---- 251
+ +DV +W MI +++ G AL F+ M G +P+ F SV ACSN
Sbjct: 473 RMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGV-EPDSVTFSSVLQACSNLEDGR 531
Query: 252 ----------------------------------ARILFNEIDSPDLASWNALIAGVASH 277
AR +F +D SW+A++ A H
Sbjct: 532 EVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESMDRSSRISWSAIMTLCARH 591
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
++ + + M + ++PDG+T+ ++L +C + ++II D +P
Sbjct: 592 GQHDDIIDTYRLMVNEGVVPDGVTLIAILNSCSHAGLTDEACHYFTWIIS---DFELPH- 647
Query: 338 NAILTMYAKCSV--LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
L + +C V LC A + ++AEEL + R
Sbjct: 648 ---LDEHYQCMVDLLCRAGRL-----------------------DEAEELISMIDR---- 677
Query: 396 QIKPDHITFNDVMGACAKMASL 417
PD +T N ++ AC L
Sbjct: 678 ---PDVVTLNTMLAACKNQQDL 696
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 151/297 (50%), Gaps = 21/297 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ + ACS R +L + + + I S ++ +++ Y KCG +E+AR FD+M
Sbjct: 415 TFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRM 474
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+V++WT MI G +Q A++L+ +M GV P TF S+++ACS L GR
Sbjct: 475 ESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSNLED---GR 531
Query: 157 QLHAHVIKSEHG--SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
++HA ++ ++ G S + N LI MY + + DAR +F + R SW +++ ++
Sbjct: 532 EVHARILAAQGGKMSDFLG-NGLINMYARCGSMRDARQIFESMDRSSRISWSAIMTLCAR 590
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------NFARILFNEIDSPDLA 265
G + + + M++ G P+ ++ ++CS ++ + ++ + P L
Sbjct: 591 HGQHDDIIDTYRLMVNEGVV-PDGVTLIAILNSCSHAGLTDEACHYFTWIISDFELPHLD 649
Query: 266 S-WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
+ ++ + +EA L S M DR PD +T++++L AC + L++G +
Sbjct: 650 EHYQCMVDLLCRAGRLDEAEELIS-MIDR---PDVVTLNTMLAACKNQQDLHRGART 702
>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
Length = 744
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 171/552 (30%), Positives = 271/552 (49%), Gaps = 53/552 (9%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MY +CGS+ AR FD M RNVVSW+AMIA +Q DA++L+++M GV T
Sbjct: 1 MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGI 197
F S++ AC+ LG++ LG+ +H ++ G +I N ++ MY K + AR VF +
Sbjct: 61 FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------- 249
K+ +W +MIAA S+ EA EM G +PN+ SV AC+
Sbjct: 121 EAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDG-LRPNKITLVSVIDACAWMQSISRG 179
Query: 250 --------------------------------NFARILFNEIDSPDLASWNALIAGVASH 277
AR I++ D SW L+A A H
Sbjct: 180 RIVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARH 239
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
+ A+++ M + D T +LL +C+ L G ++H + + G + + +
Sbjct: 240 GHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQ 299
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
A++ MY KC A F + D WN+++AA + +Q +E +F+RM +
Sbjct: 300 TALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGV 359
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV-------FVMNGLMDIYIKCG 450
PD +TF ++ ACA +A+L + H + + GL FD + ++++Y KCG
Sbjct: 360 APDAVTFLSILDACASLAALGLGRLTHSRMLERGL-FDRQAVASADLLTTSVINMYAKCG 418
Query: 451 SLGSARKLF---NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
SL A+ F DVV+WS+++ Y+QFG +EAL+ F M+ GV P+ V+ V
Sbjct: 419 SLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVS 478
Query: 508 VLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
+ CSH GLV E + + + +++GI PT H +C+VDLL+RAG + EAE + +
Sbjct: 479 AIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLG 538
Query: 568 ADIVVWKSLLAS 579
A W +LL++
Sbjct: 539 AHHSTWMTLLSA 550
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 208/436 (47%), Gaps = 51/436 (11%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKC-QPDVVLQNHILNMYGKCGS 85
++ ++ T+ ++ AC+SL ++ LG+ +H+ I+ DV+L N I+NMYGKCG
Sbjct: 50 DHEGVKANAITFVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGE 109
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
++ AR F++M +N V+W MIA CS++ + +A L +M G+ P + T S+I A
Sbjct: 110 VDLAREVFERMEAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDA 169
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
C+ + S+ GR +H V S NAL+ +Y K ++ AR+ GI +D SW
Sbjct: 170 CAWMQSISRGRIVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISW 229
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC----------------- 248
+++AA+++ G+ A+ M H G + + F F ++ +C
Sbjct: 230 TTLLAAYARHGHGKRAIAVIKRMDHEGV-KLDSFTFVNLLESCVAIAALALGEEIHDRLA 288
Query: 249 -----------------------SNFARILFNEI-DSPDLASWNALIAGVASHSNANEAM 284
+ AR F+ + D D+ WNAL+A E +
Sbjct: 289 ESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETL 348
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA----- 339
+F+ M + + PD +T S+L AC L G HS +++ G V +A
Sbjct: 349 GIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTT 408
Query: 340 -ILTMYAKCSVLCNALLVFKEL--GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
++ MYAKC L +A F + + +D V+W++++AA Q +EE R F M
Sbjct: 409 SVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEG 468
Query: 397 IKPDHITFNDVMGACA 412
+KPD ++F + C+
Sbjct: 469 VKPDSVSFVSAIAGCS 484
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHIL------LSKCQPDVVLQNHILNMYGKCGSLEDAR 90
T+ ++ AC+SL +L LGR H +L +L ++NMY KCGSL DA+
Sbjct: 365 TFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAK 424
Query: 91 MGFDKMPQ---RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
F K + +VV+W+AM+A SQ +A++ + M Q GV P +F S I CS
Sbjct: 425 AEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCS 484
Query: 148 GLGSV 152
G V
Sbjct: 485 HSGLV 489
>gi|5262217|emb|CAB45843.1| putative protein [Arabidopsis thaliana]
gi|7268873|emb|CAB79077.1| putative protein [Arabidopsis thaliana]
Length = 740
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 179/594 (30%), Positives = 305/594 (51%), Gaps = 20/594 (3%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N+ +S L ++ +ALV Y + + R T A ++SACS + G + H +
Sbjct: 73 NNMISVLVRKGFEEKALVVYKRMVCDGFLPSR-FTLASVLSACSKVLDGVFGMRCHGVAV 131
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMG-FDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ ++ + N +L+MY KCG + D + F+ + Q N VS+TA+I G ++ + +A+
Sbjct: 132 KTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAV 191
Query: 122 KLYIQMLQSGVMPGQFTFGSII------KACSGLGSVC---LGRQLHAHVIKSEHGSHLI 172
+++ M + GV +I+ + C L + LG+Q+H ++ G L
Sbjct: 192 QMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLH 251
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
N+L+ +Y K + A +F+ + +V SW MI F + Y + F +
Sbjct: 252 LNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ-EYRSDKSVEFLTRMRDS 310
Query: 233 AYQPNEFIFGSVFSAC-----SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
+QPNE SV AC R +F+ I P +++WNA+++G +++ + EA+S F
Sbjct: 311 GFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNF 370
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
+M+ + L PD T+ +L +C L G Q+H +I+ N + + ++ +Y++C
Sbjct: 371 RQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSEC 430
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE-ELFRLFSRMLASQIK-PDHITFN 405
+ + +F + D WNS+I+ +HN + + LF RM + + P+ +F
Sbjct: 431 EKMEISECIFDDCINELDIACWNSMISG-FRHNMLDTKALILFRRMHQTAVLCPNETSFA 489
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
V+ +C+++ SL Q H + K+G D FV L D+Y KCG + SAR+ F+ +
Sbjct: 490 TVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRK 549
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
+ V W+ +I GY G GDEA+ L+ +M S G P+ +T V VLTACSH GLVE GL +
Sbjct: 550 NTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEIL 609
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M+ +GI P +H C+VD L RAG + +AE + V+W+ LL+S
Sbjct: 610 SSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSS 663
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/547 (23%), Positives = 251/547 (45%), Gaps = 39/547 (7%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
RKV D + + DV N L K G L +A FD MP+R+VVSW MI+ +
Sbjct: 27 RKVFDEMSVR----DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRK 82
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
E A+ +Y +M+ G +P +FT S++ ACS + G + H +K+ ++
Sbjct: 83 GFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVG 142
Query: 175 NALIAMYTKFDRILD-ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA 233
NAL++MY K I+D VF +++ + S+ ++I ++ LEA+ F M G
Sbjct: 143 NALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGV 202
Query: 234 YQPNEFIFGSVFS------ACSNFARILFNEIDSP------------DLASWNALIAGVA 275
Q + ++ S C + + I NE+ DL N+L+ A
Sbjct: 203 -QVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYA 261
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM---GFDS 332
+ + N A +F+EM + ++ + + +G Y+ + ++ +M GF
Sbjct: 262 KNKDMNGAELIFAEMPEVNVVSWNIMI-------VGFGQEYRSDKSVEFLTRMRDSGFQP 314
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N C ++L + + +F + + + S +WN++++ + EE F +M
Sbjct: 315 NEVTCISVLGACFRSGDVETGRRIFSSIPQPSVS-AWNAMLSGYSNYEHYEEAISNFRQM 373
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
+KPD T + ++ +CA++ LE Q+H + +T ++ + +++GL+ +Y +C +
Sbjct: 374 QFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKM 433
Query: 453 GSARKLFNFMENP-DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV-SPNLVTLVGVLT 510
+ +F+ N D+ W+S+I G+ +AL LF RM V PN + VL+
Sbjct: 434 EISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLS 493
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
+CS + + G + ++ G + + + D+ + G + A F + + +
Sbjct: 494 SCSRLCSLLHGRQFHGLVVKS-GYVSDSFVETALTDMYCKCGEIDSARQFFDAVL-RKNT 551
Query: 571 VVWKSLL 577
V+W ++
Sbjct: 552 VIWNEMI 558
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 31/214 (14%)
Query: 328 MGFDSNVPVCNAILTMYAKCS-----------------VLCNALLVFK----ELGK---- 362
MG S+ +CN +L +Y +C NA L F+ +LG+
Sbjct: 1 MGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEV 60
Query: 363 -----NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
D VSWN++I+ ++ E+ ++ RM+ P T V+ AC+K+
Sbjct: 61 FDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDG 120
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL-GSARKLFNFMENPDVVSWSSLILG 476
+ H KTGL ++FV N L+ +Y KCG + ++F + P+ VS++++I G
Sbjct: 121 VFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGG 180
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
A+ EA+++F M GV + V L +L+
Sbjct: 181 LARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 214
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 31/116 (26%)
Query: 431 GLAFDVFVMNGLMDIYIKC-------------------------------GSLGSARKLF 459
G+ D ++ N L+D+YI+C G LG A ++F
Sbjct: 2 GMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVF 61
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
+ M DVVSW+++I + G ++AL ++ RM G P+ TL VL+ACS V
Sbjct: 62 DGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKV 117
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 174/542 (32%), Positives = 277/542 (51%), Gaps = 38/542 (7%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNM--YGKCGSLEDARMGFDKMPQ 98
L+S C S ++L +++H I+ + + ++ G+L A + F+ + Q
Sbjct: 38 LLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQ 94
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
N W MI G S + AI Y++ML GV P +TF ++K+C+ +G+ G+Q+
Sbjct: 95 PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H HV+K S +LI MY + + A VFS + +D S+ ++I ++ G
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRG-- 212
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHS 278
C + AR LF EI D SWNA+IAG A
Sbjct: 213 -----------------------------CLDDARRLFEEIPVRDAVSWNAMIAGYAQSG 243
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
EA++ F EM+ + P+ T+ ++L AC +L G V S+I G SN+ + N
Sbjct: 244 RFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVN 303
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
A++ MY+KC L A +F+ + + D +SWN +I N +E LF +M S ++
Sbjct: 304 ALIDMYSKCGDLDKARDLFEGICEK-DIISWNVMIGGYSHMNSYKEALALFRKMQQSNVE 362
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF-DVFVMNGLMDIYIKCGSLGSARK 457
P+ +TF ++ ACA + +L++ +H YI K L + + L+D+Y KCG++ +A++
Sbjct: 363 PNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQ 422
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
+F M+ + SW+++I G A G + AL+LF +MR G P+ +T VGVL+ACSH GL
Sbjct: 423 VFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGL 482
Query: 518 VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
VE G + M +Y I P +H C++DLL RAG EAE + M D +W SLL
Sbjct: 483 VELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLL 542
Query: 578 AS 579
+
Sbjct: 543 GA 544
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 186/420 (44%), Gaps = 74/420 (17%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL---------- 86
T+ L+ +C+ + + Q G+++H H+L + D + ++NMY + G L
Sbjct: 134 TFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKS 193
Query: 87 ---------------------EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+DAR F+++P R+ VSW AMIAG +Q+ + +A+ +
Sbjct: 194 SLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQ 253
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M ++ V P + T +++ AC+ GS+ LG + + + GS+L NALI MY+K
Sbjct: 254 EMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCG 313
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ AR++F GI KD+ SW MI +S + EAL F +M +PN+ F S+
Sbjct: 314 DLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKM-QQSNVEPNDVTFVSIL 372
Query: 246 SACSNF-----------------------------------------ARILFNEIDSPDL 264
AC+ A+ +F + L
Sbjct: 373 PACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSL 432
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
SWNA+I+G+A H +AN A+ LF +MRD PD +T +L AC + G Q S
Sbjct: 433 GSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSS 492
Query: 325 IIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+++ + ++ + + + A + K + D W S++ AC H E
Sbjct: 493 MVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVE 552
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 164/318 (51%), Gaps = 16/318 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + + EAL + N+ ST ++SAC+ SL+LG V I
Sbjct: 233 NAMIAGYAQSGRFEEALAFFQ-EMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIE 291
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ L N +++MY KCG L+ AR F+ + +++++SW MI G S +A+
Sbjct: 292 DHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALA 351
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG-SHLIAQNALIAMY 181
L+ +M QS V P TF SI+ AC+ LG++ LG+ +HA++ K G ++ +LI MY
Sbjct: 352 LFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMY 411
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K I A+ VF+G+ K + SW +MI+ + G+ AL F +M G ++P++ F
Sbjct: 412 AKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEG-FEPDDITF 470
Query: 242 GSVFSACSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
V SACS+ F+ ++ + SP L + +I + +EA +L M+
Sbjct: 471 VGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEAL---MK 527
Query: 292 DRELLPDGLTVHSLLCAC 309
+ E+ PDG SLL AC
Sbjct: 528 NMEMKPDGAIWGSLLGAC 545
>gi|302820681|ref|XP_002992007.1| hypothetical protein SELMODRAFT_134551 [Selaginella moellendorffii]
gi|300140249|gb|EFJ06975.1| hypothetical protein SELMODRAFT_134551 [Selaginella moellendorffii]
Length = 947
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 189/590 (32%), Positives = 299/590 (50%), Gaps = 49/590 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ A S ++ G + I+ S +V + N ++NMYGKC SL +A+ F M
Sbjct: 332 TFVSILDA-SVWEEIEEGEFLRSRIIESGYGSNVAVCNSLVNMYGKCHSLGNAKEVFWSM 390
Query: 97 PQR-NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+R N +SW++++A +QN Q +A+KL+ M G+ P + T S++ AC L +
Sbjct: 391 EERKNEISWSSLVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRASKQS 450
Query: 156 RQLHAHVIKSEHGSHLIAQNALIA---MYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
Q+HA V+++ ++ NAL A MY + + DAR VF+G+ RKD W S++AA+
Sbjct: 451 SQIHARVLEAGLERDVVVANALTALLNMYARCHSLEDARKVFAGMCRKDAICWNSLLAAY 510
Query: 213 SKLGYELEALCHFNEMLHHG--AYQPNEFIFGSVFSACSNF------------------- 251
++ G EAL F EM G + +PN+ F S AC+N
Sbjct: 511 AQSGSGKEALQIFREMDLEGCKSMKPNDVTFVSTIDACANSMDLASGIVFHRRAAEVGMD 570
Query: 252 ---------------------ARILFNEI-DSPDLASWNALIAGVASHSNANEAMSLFSE 289
A +FN I DL SWNALI+ A + + A+ +
Sbjct: 571 SNVVVANSLIKMYGKCKRLEEAMSVFNRILGIRDLVSWNALISAFAQNGDGRRALETYWA 630
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M + PD +T S+L AC ++ +G ++H + GF+S V ++ MY +C
Sbjct: 631 MIREGVRPDRITFISVLDACATLGSIAEGREIHRQASEGGFESVDAVLGTLVNMYGRCGN 690
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
A L F +L + D+++WN++ AA Q + M +KPD++TF ++
Sbjct: 691 AMEAELAFGKL-QQRDAIAWNAVAAAITQTGDQRRALGILRGMDNEGVKPDNVTFITLLD 749
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
CA +L H + G FD+ + N L+++Y KCGSL A ++F M + VS
Sbjct: 750 TCADCNALVEGKIFHARAMELGFGFDIILGNALLNMYGKCGSLREANRVFAAMPVRNSVS 809
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W++LI+ YAQ G A+ LF M G+ PN V+ + + ACSH G++EEG ++ M
Sbjct: 810 WNTLIVAYAQNGHVKLAIGLFRDMDLEGIVPNQVSFLSIFFACSHAGMLEEGSKYFQYMV 869
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++G++PT EH C VDLL R G + +AE+ + MA DA + W LL S
Sbjct: 870 ADHGLVPTPEHYGCFVDLLGRTGRLADAEELVTGMAEDARSLDWLILLGS 919
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 179/593 (30%), Positives = 298/593 (50%), Gaps = 55/593 (9%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
PSTYA ++ C L +L+ G+++H H + + ++N ++NMYGKCG+LE+AR D
Sbjct: 29 PSTYALMLDWCVRLGALEAGKRIHRHSVECGMGKNRFVENLLINMYGKCGALEEARKILD 88
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+M NV SWT M+A +QN +DA++ + +M GV + T S + C S
Sbjct: 89 RMEDSNVFSWTIMLAAYAQNGHLDDALECFWKMELEGVRANRVTIISALGCCK---SFSR 145
Query: 155 GRQLHAHVIKSEH--GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+ H+ IK E ++ QNAL+++Y + + AR+VF I KD+ SW +MI+AF
Sbjct: 146 GQWFHSR-IKQEGFLPDDVMIQNALVSLYGRCCEVDQARSVFDEICNKDLVSWTAMISAF 204
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA------------------------- 247
+ G+ A+ F M G +P F ++ A
Sbjct: 205 VQNGHPDRAMVCFWSMQADGV-KPCRVTFITILEAVMETRDARVCEEIHLQIIETGLEKD 263
Query: 248 -------------CSNFARIL--FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
C + ++ F ++D ++ SW+ IA + + EA+ +M
Sbjct: 264 DKLLNLLVRSYGKCGDMEKMKESFEKLDEKNVVSWSGTIAAFSQNGYFWEAIRQLQKMDL 323
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ + +T S+L A + + +G + S II+ G+ SNV VCN+++ MY KC L N
Sbjct: 324 EGVQANEVTFVSILDASVWE-EIEEGEFLRSRIIESGYGSNVAVCNSLVNMYGKCHSLGN 382
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A VF + + + +SW+S++AA Q+NQA E +LF M +KPD +T V+ AC
Sbjct: 383 AKEVFWSMEERKNEISWSSLVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACG 442
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMN---GLMDIYIKCGSLGSARKLFNFMENPDVVS 469
+ + + +Q+H + + GL DV V N L+++Y +C SL ARK+F M D +
Sbjct: 443 DLRASKQSSQIHARVLEAGLERDVVVANALTALLNMYARCHSLEDARKVFAGMCRKDAIC 502
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLG---VSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
W+SL+ YAQ G G EAL++F M G + PN VT V + AC++ + G+ +R
Sbjct: 503 WNSLLAAYAQSGSGKEALQIFREMDLEGCKSMKPNDVTFVSTIDACANSMDLASGIVFHR 562
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
E G+ + ++ + + + EA N++ D+V W +L+++
Sbjct: 563 -RAAEVGMDSNVVVANSLIKMYGKCKRLEEAMSVFNRILGIRDLVSWNALISA 614
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 169/568 (29%), Positives = 271/568 (47%), Gaps = 55/568 (9%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPD-VVLQNHILNMYGKCGSLEDARMGFDKMPQR 99
+ISA +S G+ H I PD V++QN ++++YG+C ++ AR FD++ +
Sbjct: 133 IISALGCCKSFSRGQWFHSRIKQEGFLPDDVMIQNALVSLYGRCCEVDQARSVFDEICNK 192
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
++VSWTAMI+ QN + A+ + M GV P + TF +I++A + ++H
Sbjct: 193 DLVSWTAMISAFVQNGHPDRAMVCFWSMQADGVKPCRVTFITILEAVMETRDARVCEEIH 252
Query: 160 AHVIKS--EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+I++ E L+ N L+ Y K + + F + K+V SW IAAFS+ GY
Sbjct: 253 LQIIETGLEKDDKLL--NLLVRSYGKCGDMEKMKESFEKLDEKNVVSWSGTIAAFSQNGY 310
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSAC----------------------------- 248
EA+ +M G Q NE F S+ A
Sbjct: 311 FWEAIRQLQKMDLEGV-QANEVTFVSILDASVWEEIEEGEFLRSRIIESGYGSNVAVCNS 369
Query: 249 -----------SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
N + ++ + + SW++L+A A ++ A EAM LF M L P
Sbjct: 370 LVNMYGKCHSLGNAKEVFWSMEERKNEISWSSLVAAYAQNNQATEAMKLFQHMDLEGLKP 429
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN---AILTMYAKCSVLCNAL 354
D +T+ S+L AC Q Q+H+ +++ G + +V V N A+L MYA+C L +A
Sbjct: 430 DRVTLISVLDACGDLRASKQSSQIHARVLEAGLERDVVVANALTALLNMYARCHSLEDAR 489
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML---ASQIKPDHITFNDVMGAC 411
VF + + D++ WNS++AA Q +E ++F M +KP+ +TF + AC
Sbjct: 490 KVFAGMCRK-DAICWNSLLAAYAQSGSGKEALQIFREMDLEGCKSMKPNDVTFVSTIDAC 548
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN-FMENPDVVSW 470
A L H + G+ +V V N L+ +Y KC L A +FN + D+VSW
Sbjct: 549 ANSMDLASGIVFHRRAAEVGMDSNVVVANSLIKMYGKCKRLEEAMSVFNRILGIRDLVSW 608
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
++LI +AQ G G AL+ + M GV P+ +T + VL AC+ +G + EG ++R +
Sbjct: 609 NALISAFAQNGDGRRALETYWAMIREGVRPDRITFISVLDACATLGSIAEGREIHR-QAS 667
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAE 558
E G +V++ R G EAE
Sbjct: 668 EGGFESVDAVLGTLVNMYGRCGNAMEAE 695
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 169/625 (27%), Positives = 292/625 (46%), Gaps = 60/625 (9%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S+ + + A+V + +S ++ T+ ++ A R ++ ++H I+ +
Sbjct: 201 ISAFVQNGHPDRAMVCF-WSMQADGVKPCRVTFITILEAVMETRDARVCEEIHLQIIETG 259
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ D L N ++ YGKCG +E + F+K+ ++NVVSW+ IA SQN +AI+
Sbjct: 260 LEKDDKLLNLLVRSYGKCGDMEKMKESFEKLDEKNVVSWSGTIAAFSQNGYFWEAIRQLQ 319
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M GV + TF SI+ A S + G L + +I+S +GS++ N+L+ MY K
Sbjct: 320 KMDLEGVQANEVTFVSILDA-SVWEEIEEGEFLRSRIIESGYGSNVAVCNSLVNMYGKCH 378
Query: 186 RILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ +A+ VF + RK+ SW S++AA+++ EA+ F M G +P+ SV
Sbjct: 379 SLGNAKEVFWSMEERKNEISWSSLVAAYAQNNQATEAMKLFQHMDLEG-LKPDRVTLISV 437
Query: 245 FSACSNF-------------------------------------------ARILFNEIDS 261
AC + AR +F +
Sbjct: 438 LDACGDLRASKQSSQIHARVLEAGLERDVVVANALTALLNMYARCHSLEDARKVFAGMCR 497
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRE----LLPDGLTVHSLLCACIGRLTLYQ 317
D WN+L+A A + EA+ +F EM D E + P+ +T S + AC + L
Sbjct: 498 KDAICWNSLLAAYAQSGSGKEALQIFREM-DLEGCKSMKPNDVTFVSTIDACANSMDLAS 556
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G+ H ++G DSNV V N+++ MY KC L A+ VF + D VSWN++I+A
Sbjct: 557 GIVFHRRAAEVGMDSNVVVANSLIKMYGKCKRLEEAMSVFNRILGIRDLVSWNALISAFA 616
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
Q+ + M+ ++PD ITF V+ ACA + S+ ++H ++ G
Sbjct: 617 QNGDGRRALETYWAMIREGVRPDRITFISVLDACATLGSIAEGREIHRQASEGGFESVDA 676
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
V+ L+++Y +CG+ A F ++ D ++W+++ Q G AL + M + G
Sbjct: 677 VLGTLVNMYGRCGNAMEAELAFGKLQQRDAIAWNAVAAAITQTGDQRRALGILRGMDNEG 736
Query: 498 VSPNLVTLVGVLTACSHV-GLVEEGLHLYRIMENEYG--IIPTREHCSCVVDLLARAGCV 554
V P+ VT + +L C+ LVE + R ME +G II + ++++ + G +
Sbjct: 737 VKPDNVTFITLLDTCADCNALVEGKIFHARAMELGFGFDIILG----NALLNMYGKCGSL 792
Query: 555 HEAEDFINQMACDADIVVWKSLLAS 579
EA M + V W +L+ +
Sbjct: 793 REANRVFAAMPV-RNSVSWNTLIVA 816
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 118/220 (53%), Gaps = 3/220 (1%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP T+ ++ AC++L S+ GR++H + + ++NMYG+CG+ +A
Sbjct: 636 VRPDRITFISVLDACATLGSIAEGREIHRQASEGGFESVDAVLGTLVNMYGRCGNAMEAE 695
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ F K+ QR+ ++W A+ A +Q + A+ + M GV P TF +++ C+
Sbjct: 696 LAFGKLQQRDAIAWNAVAAAITQTGDQRRALGILRGMDNEGVKPDNVTFITLLDTCADCN 755
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G+ HA ++ G +I NAL+ MY K + +A VF+ + ++ SW ++I
Sbjct: 756 ALVEGKIFHARAMELGFGFDIILGNALLNMYGKCGSLREANRVFAAMPVRNSVSWNTLIV 815
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
A+++ G+ A+ F +M G PN+ F S+F ACS+
Sbjct: 816 AYAQNGHVKLAIGLFRDMDLEGIV-PNQVSFLSIFFACSH 854
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 138/294 (46%), Gaps = 13/294 (4%)
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
E R+ P T +L C+ L G ++H + ++ G N V N ++ MY KC
Sbjct: 21 EQHQRDANPS--TYALMLDWCVRLGALEAGKRIHRHSVECGMGKNRFVENLLINMYGKCG 78
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
L A + + ++++ SW ++AA Q+ ++ F +M ++ + +T +
Sbjct: 79 ALEEARKILDRM-EDSNVFSWTIMLAAYAQNGHLDDALECFWKMELEGVRANRVTIISAL 137
Query: 409 GACAKMASLEMVTQLHCYITKTG-LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
G C S H I + G L DV + N L+ +Y +C + AR +F+ + N D+
Sbjct: 138 GCC---KSFSRGQWFHSRIKQEGFLPDDVMIQNALVSLYGRCCEVDQARSVFDEICNKDL 194
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC--SHVGLVEEGLHLY 525
VSW+++I + Q G D A+ F M++ GV P VT + +L A + V E +HL
Sbjct: 195 VSWTAMISAFVQNGHPDRAMVCFWSMQADGVKPCRVTFITILEAVMETRDARVCEEIHLQ 254
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
I E G+ + + +V + G + + ++ ++ + ++V W +A+
Sbjct: 255 II---ETGLEKDDKLLNLLVRSYGKCGDMEKMKESFEKLD-EKNVVSWSGTIAA 304
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 3/174 (1%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
+N ++ T+ L+ C+ +L G+ H + D++L N +LNMYGKCGSL
Sbjct: 733 DNEGVKPDNVTFITLLDTCADCNALVEGKIFHARAMELGFGFDIILGNALLNMYGKCGSL 792
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
+A F MP RN VSW +I +QN AI L+ M G++P Q +F SI AC
Sbjct: 793 REANRVFAAMPVRNSVSWNTLIVAYAQNGHVKLAIGLFRDMDLEGIVPNQVSFLSIFFAC 852
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILDARNVFSGIA 198
S G + G + +++ ++HG ++ + + + R+ DA + +G+A
Sbjct: 853 SHAGMLEEGSKYFQYMV-ADHGLVPTPEHYGCFVDLLGRTGRLADAEELVTGMA 905
>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g13880-like [Cucumis sativus]
Length = 839
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 183/603 (30%), Positives = 299/603 (49%), Gaps = 49/603 (8%)
Query: 24 FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
F ++ + Y L+ + + L G+ VH H++ + +P + LQN++LNMY KC
Sbjct: 48 FPAYSSTFLLESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKC 107
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G A FDKM + N+V++ ++I+G Q + + L+ + + G+ ++T +
Sbjct: 108 GDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGAL 167
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
ACS G++ G+ +H ++ GS ++ N+LI MY+K ++ AR +F + D
Sbjct: 168 TACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGV 227
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-NF----------- 251
SW S+IA + + G + E L + +H N + GS ACS NF
Sbjct: 228 SWNSLIAGYVQNG-KYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLH 286
Query: 252 ------------------------------ARILFNEIDSPDLASWNALIAGVASHSN-- 279
A +F+++ ++ +NA++AG+
Sbjct: 287 DHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIE 346
Query: 280 ---ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
A +A++LF EM+ + P T SLL ACI QVH+ + K G S+ +
Sbjct: 347 DKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYI 406
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
+ ++ +Y+ + +ALL F + N V ++I LQ+ + E LF +L +
Sbjct: 407 GSILIDLYSVLGSMMDALLCFNSI-HNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYE 465
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
KPD + +M +CA M L Q+ + TK G++ N + +Y K G L +A
Sbjct: 466 EKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAAN 525
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
F MENPD+VSWS++I AQ G EAL+ F M+S G+ PN +GVL ACSH G
Sbjct: 526 LTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRG 585
Query: 517 LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
LVEEGL + ME +Y + +HC CVVDLL RAG + +AE I ++ + + V+W++L
Sbjct: 586 LVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRAL 645
Query: 577 LAS 579
L++
Sbjct: 646 LSA 648
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 214/465 (46%), Gaps = 54/465 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + + ++ ++ +D ++ +++ T AG ++ACS +L G+ +H IL
Sbjct: 129 NSLISGYVQMSNLDKVMILFDKARR-LGLKLDKYTCAGALTACSQSGNLSAGKMIHGLIL 187
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ VVL N +++MY KCG ++ AR+ FD + + VSW ++IAG QN + + +
Sbjct: 188 VYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLT 247
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVC--LGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ +M Q+G+ +T GS +KACS + C G LH H IK ++ AL+ M
Sbjct: 248 ILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDM 307
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAF-------SKLGYELEALCHFNEMLHHGA 233
Y K + DA +F + K+V + +M+A K Y +AL F EM G
Sbjct: 308 YAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAY--KALNLFFEMKSCGI 365
Query: 234 YQPNEFIFGSVFSAC-----SNFAR----------------------------------- 253
+P+ F + S+ AC FA+
Sbjct: 366 -KPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDAL 424
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
+ FN I + + A+I G + A+SLF E+ E PD +++ +C
Sbjct: 425 LCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMG 484
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
L G Q+ + K+G N+ + MYAK L A L F+++ +N D VSW+++I
Sbjct: 485 MLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQM-ENPDIVSWSTMI 543
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ QH A E R F M + I+P+H F V+ AC+ +E
Sbjct: 544 CSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVE 588
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 206/472 (43%), Gaps = 57/472 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRS--LQLGRKVHDH 60
N ++ + Y E L N + T + ACSS + G +HDH
Sbjct: 230 NSLIAGYVQNGKYEELLTILQKMHQN-GLAFNTYTLGSALKACSSNFNGCKMFGTMLHDH 288
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND- 119
+ DVV+ +L+MY K GSL+DA FD+M +NVV + AM+AG Q D
Sbjct: 289 AIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDK 348
Query: 120 ----AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
A+ L+ +M G+ P FT+ S++KAC + +Q+HA + K+ S +
Sbjct: 349 CAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGS 408
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
LI +Y+ ++DA F+ I + +MI + + G AL F E+L + +
Sbjct: 409 ILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEE-K 467
Query: 236 PNEFIFGSVFSACSNF----------------------------------------ARIL 255
P+EFI ++ S+C+N A +
Sbjct: 468 PDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLT 527
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F ++++PD+ SW+ +I A H +A EA+ F M+ + P+ +L AC R +
Sbjct: 528 FQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLV 587
Query: 316 YQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
+G++ + K +V C ++ + + L +A + LG + V W ++++
Sbjct: 588 EEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLS 647
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDH-----ITFNDVMGACAKMASLEMVT 421
AC H R+ +++ +++P + +N M A K+A+ ++ T
Sbjct: 648 ACRIHKDTVTAQRVAQKVI--ELEPLASASYVLLYNIYMDAGNKLAASKVRT 697
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 178/542 (32%), Positives = 273/542 (50%), Gaps = 62/542 (11%)
Query: 83 CGSLEDARMG-----FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQF 137
CG +E MG F+KM + W +I G + N +AI Y +M G+ F
Sbjct: 66 CGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNF 125
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
TF +IKAC L ++ +G+++H +IK + N LI MY K I A VF +
Sbjct: 126 TFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEM 185
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------- 249
+D+ SW SM++ + G L +L F EML G + + F S ACS
Sbjct: 186 PVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGN-KADRFGMISALGACSIEHCLRSG 244
Query: 250 --------------------------------NFARILFNEIDSPDLASWNALIAGVASH 277
++A +FN I S ++ +WNA+I G+
Sbjct: 245 MEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGM--- 301
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
D +++PD +T+ +LL +C L +G +H + I+ F + +
Sbjct: 302 ------------QEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLE 349
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
A++ MY KC L A VF ++ + + VSWN+++AA +Q+ Q +E ++F +L +
Sbjct: 350 TALVDMYGKCGELKLAEHVFNQMNEK-NMVSWNTMVAAYVQNEQYKEALKMFQHILNEPL 408
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
KPD IT V+ A A++AS Q+H YI K GL + F+ N ++ +Y KCG L +AR+
Sbjct: 409 KPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTARE 468
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
F+ M DVVSW+++I+ YA G G +++ F+ MR G PN T V +LTACS GL
Sbjct: 469 FFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGL 528
Query: 518 VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
++EG + M+ EYGI P EH C++DLL R G + EA+ FI +M +W SLL
Sbjct: 529 IDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLL 588
Query: 578 AS 579
A+
Sbjct: 589 AA 590
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/434 (28%), Positives = 207/434 (47%), Gaps = 26/434 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + L+ EA+ Y + IR T+ +I AC L +L +G+KVH ++
Sbjct: 93 NVIIRGYTNNGLFQEAIDFY-YRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLI 151
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
DV + N +++MY K G +E A FD+MP R++VSW +M++G + ++
Sbjct: 152 KIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLM 211
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ +ML+ G +F S + ACS + G ++H VI+SE ++ Q +LI MY
Sbjct: 212 CFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYG 271
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML----HHGAYQPNE 238
K ++ A VF+ I K++ +W +MI + + + +L GA +
Sbjct: 272 KCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDKVIPDVITMINLLPSCSQSGALLEGK 331
Query: 239 FIFG------------------SVFSACS--NFARILFNEIDSPDLASWNALIAGVASHS 278
I G ++ C A +FN+++ ++ SWN ++A +
Sbjct: 332 SIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNE 391
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
EA+ +F + + L PD +T+ S+L A + +G Q+HSYI+K+G SN + N
Sbjct: 392 QYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISN 451
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
AI+ MYAKC L A F + D VSWN++I A H + FS M K
Sbjct: 452 AIVYMYAKCGDLQTAREFFDGM-VCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFK 510
Query: 399 PDHITFNDVMGACA 412
P+ TF ++ AC+
Sbjct: 511 PNGSTFVSLLTACS 524
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 162/319 (50%), Gaps = 19/319 (5%)
Query: 4 DYVSSLCKQNLYNEALVAYDFS----QNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHD 59
DY + + +Y++ +VA++ Q + + T L+ +CS +L G+ +H
Sbjct: 277 DYAERVFNR-IYSKNIVAWNAMIGGMQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHG 335
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
+ P +VL+ +++MYGKCG L+ A F++M ++N+VSW M+A QN Q +
Sbjct: 336 FAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKE 395
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
A+K++ +L + P T S++ A + L S G+Q+H++++K GS+ NA++
Sbjct: 396 ALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVY 455
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY K + AR F G+ KDV SW +MI A++ G+ ++ F+EM G ++PN
Sbjct: 456 MYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKG-FKPNGS 514
Query: 240 IFGSVFSACSNFARI-----LFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSE 289
F S+ +ACS I FN + P + + ++ + + N +EA E
Sbjct: 515 TFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEE 574
Query: 290 MRDRELLPDGLTVHSLLCA 308
M L+P SLL A
Sbjct: 575 M---PLVPTARIWGSLLAA 590
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 174/386 (45%), Gaps = 60/386 (15%)
Query: 40 GLISA---CSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
G+ISA CS L+ G ++H ++ S+ + D+++Q +++MYGKCG ++ A F+++
Sbjct: 227 GMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRI 286
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+N+V+W AMI G QE+D V+P T +++ +CS G++ G+
Sbjct: 287 YSKNIVAWNAMIGG----MQEDDK-----------VIPDVITMINLLPSCSQSGALLEGK 331
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H I+ +L+ + AL+ MY K + A +VF+ + K++ SW +M+AA+ +
Sbjct: 332 SIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNE 391
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------------------ 252
EAL F +L+ +P+ SV A + A
Sbjct: 392 QYKEALKMFQHILNE-PLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFIS 450
Query: 253 ----------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
R F+ + D+ SWN +I A H ++ FSEMR +
Sbjct: 451 NAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFK 510
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+G T SLL AC + +G +S ++ G D + +L + + L A
Sbjct: 511 PNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKC 570
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQ 381
+E+ + W S++AA HN
Sbjct: 571 FIEEMPLVPTARIWGSLLAASRNHND 596
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/584 (28%), Positives = 298/584 (51%), Gaps = 44/584 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L+ AC + L G ++H + C V + N ++ +Y KC + AR FD+M
Sbjct: 60 TFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRM 119
Query: 97 PQRN-VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
RN VVSW ++I+ S N +A+ L+ +ML++GV+ +TF + ++AC + LG
Sbjct: 120 YVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG 179
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
Q+HA ++KS + NAL+AMY +F ++ +A +F + KD+ +W SM+ F +
Sbjct: 180 MQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQN 239
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSA---------------------------- 247
G EAL F + L + +P++ S+ A
Sbjct: 240 GLYSEALEFFYD-LQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILV 298
Query: 248 ------------CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
C ++ F+ + DL SW AG A + +A+ L +++ +
Sbjct: 299 GNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGM 358
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
D + S+L AC G L + ++H Y I+ G V + N I+ +Y +C ++ A+
Sbjct: 359 DVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPV-LQNTIIDVYGECGIIDYAVR 417
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F+ + + D VSW S+I+ + + A + +FS M + ++PD++T ++ A ++
Sbjct: 418 IFESI-ECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLS 476
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+L+ ++H +I + G + + N L+D+Y +CGS+ A K+F +N +++ W+++I
Sbjct: 477 TLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMIS 536
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
Y G G+ A++LF RM+ + P+ +T + +L ACSH GLV EG IM+ EY +
Sbjct: 537 AYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLE 596
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P EH +C+VDLL R C+ EA + M + VW +LL +
Sbjct: 597 PWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGA 640
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 162/543 (29%), Positives = 283/543 (52%), Gaps = 48/543 (8%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MYGKCGS+ DA M FDKM +R++ +W AM+ G N + A+++Y +M GV +T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI- 197
F ++KAC + + G ++H IK S + N+L+A+Y K + I AR +F +
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--SNF---- 251
R DV SW S+I+A+S G EALC F+EML G N + F + AC S+F
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVV-TNTYTFAAALQACEDSSFIKLG 179
Query: 252 ----------------------------------ARILFNEIDSPDLASWNALIAGVASH 277
A ++F ++ D+ +WN+++ G +
Sbjct: 180 MQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQN 239
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT-LYQGMQVHSYIIKMGFDSNVPV 336
+EA+ F ++++ +L PD +++ S++ A GRL L G ++H+Y IK GFDSN+ V
Sbjct: 240 GLYSEALEFFYDLQNADLKPDQVSIISIIVAS-GRLGYLLNGKEIHAYAIKNGFDSNILV 298
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
N ++ MYAKC + F +L + D +SW + A Q+ + L ++
Sbjct: 299 GNTLIDMYAKCCCMSYGGRAF-DLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEG 357
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
+ D ++ AC + L + ++H Y + GL+ D + N ++D+Y +CG + A
Sbjct: 358 MDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNTIIDVYGECGIIDYAV 416
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
++F +E DVVSW+S+I Y G ++AL++F+ M+ G+ P+ VTLV +L+A +
Sbjct: 417 RIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLS 476
Query: 517 LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
+++G ++ + + G I + +VD+ AR G V +A I + ++++W ++
Sbjct: 477 TLKKGKEIHGFIIRK-GFILEGSISNTLVDMYARCGSVEDAYK-IFTCTKNRNLILWTAM 534
Query: 577 LAS 579
+++
Sbjct: 535 ISA 537
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 156/349 (44%), Gaps = 47/349 (13%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + LY+EAL + + N +++ + +I A L L G+++H + +
Sbjct: 230 NSMLTGFIQNGLYSEAL-EFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAI 288
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ ++++ N +++MY KC + FD M ++++SWT AG +QN A++
Sbjct: 289 KNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALE 348
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG--RQLHAHVIKSEHGSHLIAQNALIAM 180
L Q+ G+ GSI+ AC GL CLG +++H + I+ S + QN +I +
Sbjct: 349 LLRQLQMEGMDVDATMIGSILLACRGLN--CLGKIKEIHGYTIRGGL-SDPVLQNTIIDV 405
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y + I A +F I KDV SW SMI+ + G +AL F+ M G +P+
Sbjct: 406 YGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETG-LEPDYVT 464
Query: 241 FGSVFSACSNFARI----------------------------------------LFNEID 260
S+ SA + + + +F
Sbjct: 465 LVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTK 524
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+ +L W A+I+ H A+ LF M+D +++PD +T +LL AC
Sbjct: 525 NRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYAC 573
>gi|302793632|ref|XP_002978581.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
gi|300153930|gb|EFJ20567.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
Length = 785
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 174/586 (29%), Positives = 299/586 (51%), Gaps = 47/586 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY L+ ACS L++G +H + S + L N ++ MYG+CG LEDAR F M
Sbjct: 163 TYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSM 222
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R++++W A+I Q+ +A+ LY MLQ G P + TF +++ +G ++ +
Sbjct: 223 VERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTEVK 282
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H+H+++S ++ AL+AMY+K + + D R +F + +++V SW M+ A++K G
Sbjct: 283 LVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHG 342
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------------------ 252
+A+ E + +P+ + + C+ A
Sbjct: 343 LGRKAV-QITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILW 401
Query: 253 ----------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
++F+ I ++ SW A++ + + + A+ LF + +
Sbjct: 402 NSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVK 461
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P +T L AC+G L +G VHS ++ G D +V + +A++ MY +C + +A
Sbjct: 462 PTCITFLEALDACVGAEALDKGRLVHSCAVQSGNDIDVSLGSALVAMYGRCGSIRDAKAC 521
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + + V+W+++IAA +QH Q E + M + TF + AC+ +A
Sbjct: 522 FDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLAD 581
Query: 417 LEMVTQLHCYITKTGLAFDV---FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
L ++H Y+ + FD V N L+ +Y KCGSL AR++F D + W+++
Sbjct: 582 LREGKRIHSYVRER--RFDTEAATVTNSLVTMYGKCGSLDCAREVFETSRRQDTICWNAI 639
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I GYAQ +A++LF RM+ GV+P+ VT V +L+ CSH GL++EG++ Y M E G
Sbjct: 640 ISGYAQHSQTRDAVELFHRMQQEGVAPDPVTFVCILSVCSHGGLLDEGVYAYASM-VELG 698
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ PT+++ +CV+DLL RAG + EAE+FI + I SLL+S
Sbjct: 699 LEPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETLTSLLSS 744
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/583 (25%), Positives = 273/583 (46%), Gaps = 45/583 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +I C+ L + +LL +PD + L MYG CGS++DA+ FD M
Sbjct: 63 TWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAALTMYGSCGSVDDAKRVFDAM 122
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P RNV++WTAMI + E A K++ M G T+ ++++ACS + +G
Sbjct: 123 PARNVITWTAMIGAHAVTSLEQ-AFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGI 181
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
LH ++S NALI MY + R+ DAR +FS + +D+ +W ++I + + G
Sbjct: 182 ILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHG 241
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSV-------------------------------- 244
+ EA+ + ML G +P++ F ++
Sbjct: 242 HVEEAVLLYQLMLQEGC-KPDKVTFVALLTMSNGPEALTEVKLVHSHIVESGVSINIALG 300
Query: 245 ------FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+S C + R LF ++ ++ SWN ++ A H +A+ + M+ +
Sbjct: 301 TALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVK 360
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD +T LL C G L G +VH +I + ++++ + N++L MY +C + A +V
Sbjct: 361 PDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMV 420
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + + + +SW +++ A + N+ + LF + S +KP ITF + + AC +
Sbjct: 421 FDGILQR-NVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEA 479
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLIL 475
L+ +H ++G DV + + L+ +Y +CGS+ A+ F+ E + V+WS++I
Sbjct: 480 LDKGRLVHSCAVQSGNDIDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIA 539
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
+ Q G E L+ M+ G+ + T L+ACS++ + EG ++ +
Sbjct: 540 AFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLREGKRIHSYVRERRFDT 599
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +V + + G + A + + + + D + W ++++
Sbjct: 600 EAATVTNSLVTMYGKCGSLDCARE-VFETSRRQDTICWNAIIS 641
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 141/549 (25%), Positives = 270/549 (49%), Gaps = 19/549 (3%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+ AC +++L + R++H I+ + V L NH+++ YGKC SL+DA F++M +N
Sbjct: 1 LLQACPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKN 60
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
V +WTA+I C+Q++ + AI L QML GV P T + + GSV ++
Sbjct: 61 VYTWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAALTMYGSCGSVDDAKR--- 117
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA----RKDVTSWGSMIAAFSKLG 216
V + ++I A+I + + A VF + + + ++ +++ A SK
Sbjct: 118 -VFDAMPARNVITWTAMIGAHA-VTSLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPE 175
Query: 217 Y-ELEALCHFNEMLHHGAYQP---NEFIFGSVFSACSNF--ARILFNEIDSPDLASWNAL 270
+ E+ + H + A + N I +++ C AR +F+ + D+ +WNAL
Sbjct: 176 FLEVGIILHMRSVESSSAMETPLCNALI--TMYGRCGRLEDARAIFSSMVERDIIAWNAL 233
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I H + EA+ L+ M PD +T +LL G L + VHS+I++ G
Sbjct: 234 ITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTEVKLVHSHIVESGV 293
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
N+ + A++ MY+KC L + +F+++ + + +SWN ++ A +H + ++
Sbjct: 294 SINIALGTALVAMYSKCESLEDTRWLFEKMPQR-NVISWNVMVTAYAKHGLGRKAVQITE 352
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
M +KPD++T ++ C A L++ ++H +I + D+ + N L+++Y +CG
Sbjct: 353 YMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCG 412
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ A +F+ + +V+SW++++ Y++ D AL LF + GV P +T + L
Sbjct: 413 EVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALD 472
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
AC +++G ++ I S +V + R G + +A+ + +
Sbjct: 473 ACVGAEALDKGRLVHSCAVQSGNDIDV-SLGSALVAMYGRCGSIRDAKACFDDTEVRKNH 531
Query: 571 VVWKSLLAS 579
V W +++A+
Sbjct: 532 VTWSAMIAA 540
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 137/527 (25%), Positives = 229/527 (43%), Gaps = 78/527 (14%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L++ + +L + VH HI+ S ++ L ++ MY KC SLED R F+KM
Sbjct: 264 TFVALLTMSNGPEALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKM 323
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
PQRNV+SW M+ +++ A+++ M GV P T ++ C+G + LGR
Sbjct: 324 PQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGR 383
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H + + + LI N+L+ MY + + A VF GI +++V SW +M+ A+S+
Sbjct: 384 KVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQN 443
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARILF-------NEID---- 260
+ AL F+ +H +P F AC + R++ N+ID
Sbjct: 444 RQDMALLLFH-AIHLSGVKPTCITFLEALDACVGAEALDKGRLVHSCAVQSGNDIDVSLG 502
Query: 261 -------------------------SPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+ +W+A+IA H E + M+ + L
Sbjct: 503 SALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGL 562
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN-VPVCNAILTMYAKCSVLCNAL 354
T S L AC L +G ++HSY+ + FD+ V N+++TMY KC L A
Sbjct: 563 DMSPATFASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAR 622
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
VF E + D++ WN+II+ QH+Q + LF RM + PD +TF ++ C+
Sbjct: 623 EVF-ETSRRQDTICWNAIISGYAQHSQTRDAVELFHRMQQEGVAPDPVTFVCILSVCSHG 681
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
L+ + + + GL ++D+ + G L A +
Sbjct: 682 GLLDEGVYAYASMVELGLEPTQDNYACVIDLLGRAGKLQEAEEF---------------- 725
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
++SLG P + TL +L++C G V+ G
Sbjct: 726 ------------------IQSLGTRPAIETLTSLLSSCKSHGDVQRG 754
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 199/427 (46%), Gaps = 44/427 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N V++ K L +A+ ++ Q + ++ T GL++ C+ L+LGRKVH I
Sbjct: 332 NVMVTAYAKHGLGRKAVQITEYMQLD-GVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIA 390
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+C+ D++L N +LNMYG+CG +E A M FD + QRNV+SWTAM+ S+ +++ A+
Sbjct: 391 EGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALL 450
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ + SGV P TF + AC G ++ GR +H+ ++S + + +AL+AMY
Sbjct: 451 LFHAIHLSGVKPTCITFLEALDACVGAEALDKGRLVHSCAVQSGNDIDVSLGSALVAMYG 510
Query: 183 KFDRILDARNVFSGI-ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
+ I DA+ F RK+ +W +MIAAF + G + E L H M G + F
Sbjct: 511 RCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQG-LDMSPATF 569
Query: 242 GSVFSACSNF-----------------------------------------ARILFNEID 260
S SACSN AR +F
Sbjct: 570 ASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETSR 629
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D WNA+I+G A HS +A+ LF M+ + PD +T +L C L +G+
Sbjct: 630 RQDTICWNAIISGYAQHSQTRDAVELFHRMQQEGVAPDPVTFVCILSVCSHGGLLDEGVY 689
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
++ ++++G + ++ + + L A + LG + S++++C H
Sbjct: 690 AYASMVELGLEPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETLTSLLSSCKSHG 749
Query: 381 QAEELFR 387
+ R
Sbjct: 750 DVQRGRR 756
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 175/587 (29%), Positives = 294/587 (50%), Gaps = 50/587 (8%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S ++ ++ ++L GR++H + DV + +++ Y K + +D R FD+
Sbjct: 98 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDE 157
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M +RNVV+WT +I+G ++N + + L+++M G P FTF + + + G G
Sbjct: 158 MKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRG 217
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
Q+H V+K+ + N+LI +Y K + AR +F K V +W SMI+ ++
Sbjct: 218 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 277
Query: 216 GYELEALCHFNEM-LHHGAYQPNEFIFGSVFSACSNFARILFNE---------------- 258
G +LEAL F M L+H + +E F S+ C+N + F E
Sbjct: 278 GLDLEALGMFYSMRLNH--VRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQN 335
Query: 259 ---------------IDS----------PDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
+D+ ++ SW A+I+G + EA+ LFSEM+ +
Sbjct: 336 IRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRK 395
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ P+ T +L A L + +VH+ ++K ++ + V A+L Y K + A
Sbjct: 396 GVRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEA 451
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA- 412
VF + N D V+W++++A Q + E ++FS + +KP+ TF+ ++ CA
Sbjct: 452 AKVFSGI-DNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAA 510
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
AS+ Q H + K+ L + V + L+ +Y K G + SA ++F D+VSW+S
Sbjct: 511 TTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNS 570
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
+I GYAQ G +AL +F M+ V + VT +GV AC+H GLVEEG + IM +
Sbjct: 571 MISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDC 630
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
I PT+EH SC+VDL +RAG + +A I+ M A +W+++LA+
Sbjct: 631 KIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAA 677
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 252/531 (47%), Gaps = 56/531 (10%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FDK P R+ S+T+++ G S++ + +A +L++ + G+ F S++K + L
Sbjct: 54 FDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDE 113
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
GRQLH IK + +L+ Y K D RNVF + ++V +W ++I+ +
Sbjct: 114 LFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGY 173
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGS----------------------------- 243
++ E L F M G QPN F F +
Sbjct: 174 ARNSLNEEVLTLFMRMQDEGT-QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 232
Query: 244 ---------VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
++ C N ARILF++ + + +WN++I+G A++ EA+ +F MR
Sbjct: 233 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 292
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ + S++ C L Q+H ++K GF + + A++ Y+KC + +
Sbjct: 293 NHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLD 352
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
AL +FKE G + VSW ++I+ LQ++ EE LFS M ++P+ T++ ++ A
Sbjct: 353 ALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALP 412
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
++ +++H + KT V L+D Y+K G + A K+F+ ++N D+V+WS+
Sbjct: 413 VISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSA 468
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC-SHVGLVEEGLHLYRIMENE 531
++ GYAQ G + A+K+F+ + GV PN T +L C + + +G +
Sbjct: 469 MLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFH-----G 523
Query: 532 YGIIPTREHCSCV----VDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ I + CV + + A+ G + AE+ + + D+V W S+++
Sbjct: 524 FAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQR-EKDLVSWNSMIS 573
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 208/445 (46%), Gaps = 50/445 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S L EAL + +S ++R+ S++A +I C++L+ L+ ++H ++
Sbjct: 268 NSMISGYAANGLDLEALGMF-YSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVV 326
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP-QRNVVSWTAMIAGCSQNYQENDAI 121
D ++ ++ Y KC ++ DA F + NVVSWTAMI+G QN + +A+
Sbjct: 327 KYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAV 386
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
L+ +M + GV P +FT+ I+ A V ++HA V+K+ + AL+ Y
Sbjct: 387 GLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAY 442
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K ++ +A VFSGI KD+ +W +M+A +++ G A+ F+E L G +PNEF F
Sbjct: 443 VKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSE-LTKGGVKPNEFTF 501
Query: 242 GSVFSACS-----------------------------------------NFARILFNEID 260
S+ + C+ A +F
Sbjct: 502 SSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQR 561
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
DL SWN++I+G A H A +A+ +F EM+ R++ D +T + AC + +G +
Sbjct: 562 EKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEK 621
Query: 321 VHSYIIKMGFDSNVPVCNA-ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+++ + N+ ++ +Y++ L A+ V + A S W +I+AAC H
Sbjct: 622 YFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVH 681
Query: 380 NQAEELFRLFSRMLASQIKPDHITF 404
+ EL RL + + + I D +
Sbjct: 682 KKT-ELGRLAAEKIIAMIPEDSAAY 705
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 152/307 (49%), Gaps = 18/307 (5%)
Query: 217 YELEALCHFNEMLHHGAYQPNEFI--FGSVFSACSNFARILFNEIDSPDLASWNALIAGV 274
++L+ + NE+ G +PN I FG+ S+ +A LF++ D S+ +L+ G
Sbjct: 16 FKLKFCIYANEL---GNLKPNFRIYCFGAASSSRLYYAHNLFDKSPDRDRESYTSLLFGF 72
Query: 275 ASHSNANEAMSLFSEMR------DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
+ EA LF ++ D + L V + LC L+ G Q+H IK
Sbjct: 73 SRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCD-----ELF-GRQLHCQCIKF 126
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
GF +V V +++ Y K S + VF E+ K + V+W ++I+ +++ EE+ L
Sbjct: 127 GFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEM-KERNVVTWTTLISGYARNSLNEEVLTL 185
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
F RM +P+ TF +G A+ Q+H + K GL + V N L+++Y+K
Sbjct: 186 FMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLK 245
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
CG++ AR LF+ E VV+W+S+I GYA G EAL +F MR V + + +
Sbjct: 246 CGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASI 305
Query: 509 LTACSHV 515
+ C+++
Sbjct: 306 IKLCANL 312
>gi|356518094|ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Glycine max]
Length = 714
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 162/538 (30%), Positives = 275/538 (51%), Gaps = 36/538 (6%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
+++ Y K G AR F+ +P +VVSW +I G SQ+ +DA++L++ ML+ P
Sbjct: 84 LIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLFVHMLRESFRPN 143
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
Q T S++ +C GR +HA IK+ G NAL +MY K D + ++ +F
Sbjct: 144 QTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAKCDDLEASQLLFQ 203
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA-------- 247
+ K+V SW +MI A+ + G+E +A+ F EML G +QP+ ++ SA
Sbjct: 204 EMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEG-WQPSPVTMMNLMSANAVPETVH 262
Query: 248 --------------------------CSNFARILFNEIDSPDLASWNALIAGVASHSNAN 281
++ A++L+ + DL S +I+ +
Sbjct: 263 CYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYPTKDLISLTGIISSYSEKGEVE 322
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
A+ F + ++ PD + + S+L G H Y +K G ++ V N ++
Sbjct: 323 SAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHGYGLKNGLTNDCLVANGLI 382
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+ Y++ + AL +F + + ++WNS+I+ C+Q ++ + LF +M KPD
Sbjct: 383 SFYSRFDEILAALSLFFDRSEKP-LITWNSMISGCVQAGKSSDAMELFCQMNMCGQKPDA 441
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
IT ++ C ++ L + LH YI + + + F L+D+Y KCG L A K+F
Sbjct: 442 ITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIFYS 501
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
+ +P +V+W+S+I GY+ +G +A F++++ G+ P+ +T +GVL AC+H GLV G
Sbjct: 502 INDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEPDKITFLGVLAACTHGGLVYAG 561
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ +RIM EYG++PT +H +C+V LL RAG EA + IN M D VW +LL++
Sbjct: 562 MEYFRIMRKEYGLMPTLQHYACIVGLLGRAGLFKEAIEIINNMEIRPDSAVWGALLSA 619
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 128/516 (24%), Positives = 218/516 (42%), Gaps = 65/516 (12%)
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG---------RQLHAHVIKS 165
+ + A+ ++ Q+LQS P TF +IKAC S Q+ ++K
Sbjct: 13 HDASSALLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQTQLLKR 72
Query: 166 EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHF 225
L ALI Y K AR +F + DV SW +I +S+ G+ +AL F
Sbjct: 73 GIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLF 132
Query: 226 NEMLHHGAYQPNEFIFGSVFSAC--------------------------------SNFAR 253
ML +++PN+ S+ +C S +A+
Sbjct: 133 VHMLRE-SFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAK 191
Query: 254 --------ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
+LF E+ ++ SWN +I + ++A+ F EM P +T+ +L
Sbjct: 192 CDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMMNL 251
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
+ A T VH YIIK GF + V +++ +YAK A L++ E D
Sbjct: 252 MSANAVPET------VHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLY-ECYPTKD 304
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
+S II++ + + E F + L IKPD + V+ + + + H
Sbjct: 305 LISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHG 364
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
Y K GL D V NGL+ Y + + +A LF +++W+S+I G Q G +
Sbjct: 365 YGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSSD 424
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE--EGLHLYRIMENEYGIIPTREHC-S 542
A++LF +M G P+ +T+ +L+ C +G + E LH Y + N + + +
Sbjct: 425 AMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNN----VKVEDFTGT 480
Query: 543 CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++D+ + G + AE + D +V W S+++
Sbjct: 481 ALIDMYTKCGRLDYAEKIFYSIN-DPCLVTWNSIIS 515
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 209/490 (42%), Gaps = 56/490 (11%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
+ R +T A L+ +C GR VH + + D L N + +MY KC LE +
Sbjct: 139 SFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAKCDDLEAS 198
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
++ F +M ++NV+SW MI QN E+ A+ + +ML+ G P T +++ A +
Sbjct: 199 QLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMMNLMSANA-- 256
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
+ +H ++IK +L+ +Y K A+ ++ KD+ S +I
Sbjct: 257 ----VPETVHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYPTKDLISLTGII 312
Query: 210 AAFSKLGYELEALCHFNEMLH--------------HGAYQPNEFIFGSVF---------- 245
+++S+ G A+ F + L HG P+ F G F
Sbjct: 313 SSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHGYGLKNGLT 372
Query: 246 ----------SACSNFARIL------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
S S F IL F+ + P L +WN++I+G +++AM LF +
Sbjct: 373 NDCLVANGLISFYSRFDEILAALSLFFDRSEKP-LITWNSMISGCVQAGKSSDAMELFCQ 431
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M PD +T+ SLL C L G +H YI++ A++ MY KC
Sbjct: 432 MNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDFTGTALIDMYTKCGR 491
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L A +F + + V+WNSII+ + + F FS++ ++PD ITF V+
Sbjct: 492 LDYAEKIFYSI-NDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEPDKITFLGVLA 550
Query: 410 ACAK----MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-N 464
AC A +E + + GL + ++ + + G A ++ N ME
Sbjct: 551 ACTHGGLVYAGMEYFRIMR---KEYGLMPTLQHYACIVGLLGRAGLFKEAIEIINNMEIR 607
Query: 465 PDVVSWSSLI 474
PD W +L+
Sbjct: 608 PDSAVWGALL 617
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 168/383 (43%), Gaps = 48/383 (12%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P T L+SA + + VH +I+ D + ++ +Y K G + A++ ++
Sbjct: 245 PVTMMNLMSANA------VPETVHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYE 298
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
P ++++S T +I+ S+ + A++ +IQ L+ + P S++ S +
Sbjct: 299 CYPTKDLISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAI 358
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G H + +K+ + + N LI+ Y++FD IL A ++F + K + +W SMI+ +
Sbjct: 359 GCAFHGYGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQ 418
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------- 249
G +A+ F +M G +P+ S+ S C
Sbjct: 419 AGKSSDAMELFCQMNMCGQ-KPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDF 477
Query: 250 ---------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
++A +F I+ P L +WN++I+G + + ++A FS+++++
Sbjct: 478 TGTALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQG 537
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNA 353
L PD +T +L AC +Y GM+ + K G + I+ + + + A
Sbjct: 538 LEPDKITFLGVLAACTHGGLVYAGMEYFRIMRKEYGLMPTLQHYACIVGLLGRAGLFKEA 597
Query: 354 LLVFKELGKNADSVSWNSIIAAC 376
+ + + DS W ++++AC
Sbjct: 598 IEIINNMEIRPDSAVWGALLSAC 620
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 136/292 (46%), Gaps = 16/292 (5%)
Query: 30 NIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
+ I+P A ++ S +G H + L + D ++ N +++ Y + +
Sbjct: 333 KLDIKPDAVALISVLHGISDPSHFAIGCAFHGYGLKNGLTNDCLVANGLISFYSRFDEIL 392
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
A F ++ +++W +MI+GC Q + +DA++L+ QM G P T S++ C
Sbjct: 393 AALSLFFDRSEKPLITWNSMISGCVQAGKSSDAMELFCQMNMCGQKPDAITIASLLSGCC 452
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
LG + +G LH +++++ ALI MYTK R+ A +F I + +W S
Sbjct: 453 QLGYLRIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIFYSINDPCLVTWNS 512
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNE 258
+I+ +S G E +A F+++ G +P++ F V +AC++ + RI+ E
Sbjct: 513 IISGYSLYGLEHKAFGCFSKLQEQG-LEPDKITFLGVLAACTHGGLVYAGMEYFRIMRKE 571
Query: 259 ID-SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
P L + ++ + EA+ + + M E+ PD +LL AC
Sbjct: 572 YGLMPTLQHYACIVGLLGRAGLFKEAIEIINNM---EIRPDSAVWGALLSAC 620
>gi|302806575|ref|XP_002985037.1| hypothetical protein SELMODRAFT_121365 [Selaginella moellendorffii]
gi|300147247|gb|EFJ13912.1| hypothetical protein SELMODRAFT_121365 [Selaginella moellendorffii]
Length = 763
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 191/593 (32%), Positives = 285/593 (48%), Gaps = 52/593 (8%)
Query: 37 TYAGLISACSSL-RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
TY + AC+SL R L+ G VH S C + N +++MY KCGSL DA+ FD
Sbjct: 135 TYLAALVACASLLRCLERGMDVHSQSRTSGCDSVPFVANTLIDMYSKCGSLLDAKKVFDS 194
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
R+ V+WTAM+ G ++N + A+ L+ M Q G M + + S+++ C ++ G
Sbjct: 195 TQARDAVAWTAMMLGYAENGEAERALHLFACMEQQGCMYNREAYTSLLRECISGRALERG 254
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
++HA +I E N L+ MY K + AR F I R++ SW M+AA+
Sbjct: 255 ARIHARLIAIEKDKDTAIGNLLVQMYAKCGDLHRARKAFYSIERRNSVSWTVMLAAYIDH 314
Query: 216 GYELEALCHFNEMLHHGAYQP-NEFIFGSVFSACSNF----------------------- 251
G + + LC F+ M GA + F V SACS+
Sbjct: 315 GKQEQGLCLFHTMDLEGAQADMDAFTLSCVLSACSSLGAGAEGQAIHARLVACGYELDIP 374
Query: 252 -----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
AR +F+ I SW ++I+ H +E++ +F M
Sbjct: 375 LQNALVTMYAKCHCLEEARRVFDNIQDKSRVSWTSIISAYVQHERGDESLKMFLAMNLDG 434
Query: 295 LLPDGLTVHSLLCACI-----GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
+ PD +T+ +L AC GR L G VH+ I G D N V A++ MYA+C
Sbjct: 435 MQPDEMTLSALCAACCQLEDRGR-GLAVGRGVHTRIRVAGHDQNPVVGTALVCMYARCGC 493
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L A VF +L D VSWN+++ A ++ +AEE RL RM A + PD TF V+
Sbjct: 494 LLEAAAVFNKLTPK-DVVSWNAMLTATVEAGEAEEALRLHQRMRAEGVMPDAATFAVVVA 552
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
AC+ + +H + GL L+ +Y KCG L A +F M+ V++
Sbjct: 553 ACSALKDEATSRAVHTEVAARGLDGHPVSGTALVCMYAKCGRLDDATTVFERMQRHSVLA 612
Query: 470 ---WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
W+S++ A+ G G A++ F M V P+ +T+ +L ACSH GL+ GL +
Sbjct: 613 VAAWNSILAALAKHGHGATAVEFFRVMTMAYVQPDGITITVMLHACSHSGLLATGLDYFL 672
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M +++G+ P EH +C++DLL RAG EAE+ I M D V WK+LLAS
Sbjct: 673 SMLHDFGLAPAAEHYACLIDLLGRAGVGAEAEEVIRGMPFAPDNVAWKTLLAS 725
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 130/505 (25%), Positives = 230/505 (45%), Gaps = 51/505 (10%)
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGS--HLIAQNALIAM 180
L+ ++ G F ++I S GS+ R + +++ + S A N+L+ M
Sbjct: 17 LHAGAVEIGAESDTFVANTVIDVFSRCGSLVNARNVFDRMVRRDVVSWNDSYALNSLVNM 76
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K +++AR F + R+D SW ++I A+++ G EAL F+ M G P+
Sbjct: 77 YAKCGSLVEARAEFEKLQRRDAVSWTTLILAYTENGRGGEALELFSRMADEGCL-PDGRT 135
Query: 241 FGSVFSACSNFARIL-----------------------------------------FNEI 259
+ + AC++ R L F+
Sbjct: 136 YLAALVACASLLRCLERGMDVHSQSRTSGCDSVPFVANTLIDMYSKCGSLLDAKKVFDST 195
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
+ D +W A++ G A + A A+ LF+ M + + + SLL CI L +G
Sbjct: 196 QARDAVAWTAMMLGYAENGEAERALHLFACMEQQGCMYNREAYTSLLRECISGRALERGA 255
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
++H+ +I + D + + N ++ MYAKC L A F + + +SVSW ++AA + H
Sbjct: 256 RIHARLIAIEKDKDTAIGNLLVQMYAKCGDLHRARKAFYSIERR-NSVSWTVMLAAYIDH 314
Query: 380 NQAEELFRLFSRM--LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
+ E+ LF M +Q D T + V+ AC+ + + +H + G D+
Sbjct: 315 GKQEQGLCLFHTMDLEGAQADMDAFTLSCVLSACSSLGAGAEGQAIHARLVACGYELDIP 374
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
+ N L+ +Y KC L AR++F+ +++ VSW+S+I Y Q GDE+LK+F M G
Sbjct: 375 LQNALVTMYAKCHCLEEARRVFDNIQDKSRVSWTSIISAYVQHERGDESLKMFLAMNLDG 434
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC---SCVVDLLARAGCV 554
+ P+ +TL + AC + GL + R + + ++ + +V + AR GC+
Sbjct: 435 MQPDEMTLSALCAACCQLEDRGRGLAVGRGVHTRIRVAGHDQNPVVGTALVCMYARCGCL 494
Query: 555 HEAEDFINQMACDADIVVWKSLLAS 579
EA N++ D+V W ++L +
Sbjct: 495 LEAAAVFNKLT-PKDVVSWNAMLTA 518
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 206/447 (46%), Gaps = 43/447 (9%)
Query: 140 GSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR 199
G ++K S L C LHA ++ S N +I ++++ +++ARNVF + R
Sbjct: 3 GQLVKVAS-LDKCC---ALHAGAVEIGAESDTFVANTVIDVFSRCGSLVNARNVFDRMVR 58
Query: 200 KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--ARILFN 257
+DV SW + +Y N + ++++ C + AR F
Sbjct: 59 RDVVSW-------------------------NDSYALNSLV--NMYAKCGSLVEARAEFE 91
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT-LY 316
++ D SW LI + EA+ LFS M D LPDG T + L AC L L
Sbjct: 92 KLQRRDAVSWTTLILAYTENGRGGEALELFSRMADEGCLPDGRTYLAALVACASLLRCLE 151
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+GM VHS G DS V N ++ MY+KC L +A VF + D+V+W +++
Sbjct: 152 RGMDVHSQSRTSGCDSVPFVANTLIDMYSKCGSLLDAKKVFDST-QARDAVAWTAMMLGY 210
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
++ +AE LF+ M + + ++ C +LE ++H + D
Sbjct: 211 AENGEAERALHLFACMEQQGCMYNREAYTSLLRECISGRALERGARIHARLIAIEKDKDT 270
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
+ N L+ +Y KCG L ARK F +E + VSW+ ++ Y G ++ L LF M
Sbjct: 271 AIGNLLVQMYAKCGDLHRARKAFYSIERRNSVSWTVMLAAYIDHGKQEQGLCLFHTMDLE 330
Query: 497 GVSPNL--VTLVGVLTACSHVGLVEEGLHLY-RIMENEYGI-IPTREHCSCVVDLLARAG 552
G ++ TL VL+ACS +G EG ++ R++ Y + IP + + +V + A+
Sbjct: 331 GAQADMDAFTLSCVLSACSSLGAGAEGQAIHARLVACGYELDIPLQ---NALVTMYAKCH 387
Query: 553 CVHEAEDFINQMACDADIVVWKSLLAS 579
C+ EA + + D V W S++++
Sbjct: 388 CLEEARRVFDNIQ-DKSRVSWTSIISA 413
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 182/397 (45%), Gaps = 55/397 (13%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T + ++SACSSL + G+ +H ++ + D+ LQN ++ MY KC LE+AR FD +
Sbjct: 340 TLSCVLSACSSLGAGAEGQAIHARLVACGYELDIPLQNALVTMYAKCHCLEEARRVFDNI 399
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS----V 152
++ VSWT++I+ Q+ + ++++K+++ M G+ P + T ++ AC L +
Sbjct: 400 QDKSRVSWTSIISAYVQHERGDESLKMFLAMNLDGMQPDEMTLSALCAACCQLEDRGRGL 459
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
+GR +H + + H + + AL+ MY + +L+A VF+ + KDV SW +M+ A
Sbjct: 460 AVGRGVHTRIRVAGHDQNPVVGTALVCMYARCGCLLEAAAVFNKLTPKDVVSWNAMLTAT 519
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-----ARILFNEIDSPDL--- 264
+ G EAL M G P+ F V +ACS +R + E+ + L
Sbjct: 520 VEAGEAEEALRLHQRMRAEGV-MPDAATFAVVVAACSALKDEATSRAVHTEVAARGLDGH 578
Query: 265 -----------------------------------ASWNALIAGVASHSNANEAMSLFSE 289
A+WN+++A +A H + A+ F
Sbjct: 579 PVSGTALVCMYAKCGRLDDATTVFERMQRHSVLAVAAWNSILAALAKHGHGATAVEFFRV 638
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV-PVCN---AILTMYA 345
M + PDG+T+ +L AC L G+ Y + M D + P ++ +
Sbjct: 639 MTMAYVQPDGITITVMLHACSHSGLLATGLD---YFLSMLHDFGLAPAAEHYACLIDLLG 695
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ V A V + + D+V+W +++A+C A
Sbjct: 696 RAGVGAEAEEVIRGMPFAPDNVAWKTLLASCQTSKDA 732
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 154/340 (45%), Gaps = 22/340 (6%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSL----RSLQLGRKVHDHI 61
+S+ + +E+L + + N ++ T + L +AC L R L +GR VH I
Sbjct: 411 ISAYVQHERGDESLKMF-LAMNLDGMQPDEMTLSALCAACCQLEDRGRGLAVGRGVHTRI 469
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
++ + V+ ++ MY +CG L +A F+K+ ++VVSW AM+ + + +A+
Sbjct: 470 RVAGHDQNPVVGTALVCMYARCGCLLEAAAVFNKLTPKDVVSWNAMLTATVEAGEAEEAL 529
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+L+ +M GVMP TF ++ ACS L R +H V H ++ AL+ MY
Sbjct: 530 RLHQRMRAEGVMPDAATFAVVVAACSALKDEATSRAVHTEVAARGLDGHPVSGTALVCMY 589
Query: 182 TKFDRILDARNVFSGIARKD---VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
K R+ DA VF + R V +W S++AA +K G+ A+ F ++ QP+
Sbjct: 590 AKCGRLDDATTVFERMQRHSVLAVAAWNSILAALAKHGHGATAV-EFFRVMTMAYVQPDG 648
Query: 239 FIFGSVFSACSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
+ ACS+ F +L + +P + LI + EA +
Sbjct: 649 ITITVMLHACSHSGLLATGLDYFLSMLHDFGLAPAAEHYACLIDLLGRAGVGAEAEEV-- 706
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
+R PD + +LL +C +G + +I+M
Sbjct: 707 -IRGMPFAPDNVAWKTLLASCQTSKDAGRGSRAAMQLIRM 745
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 178/616 (28%), Positives = 300/616 (48%), Gaps = 104/616 (16%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
+P+V+ N ++N Y K GSL DA F +MP R+V SW +++G Q+ Q +A+ +++
Sbjct: 89 EPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVS 148
Query: 127 MLQSG-VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK-- 183
M Q+G +P FTFG ++K+C LG + QL + K + Q AL+ M +
Sbjct: 149 MRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCG 208
Query: 184 --------FDRILD---------------------ARNVFSGIARKDVTSWGSMIAAFSK 214
F RI + A +F + +DV SW +I+A SK
Sbjct: 209 AMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSK 268
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------- 251
G EAL +M H +P+ + S +AC+
Sbjct: 269 SGRVREALDMVVDM-HGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPY 327
Query: 252 -----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
A+ +F+ + + SW LI G + +E++ LF++MR
Sbjct: 328 VASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAEL 387
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ D + +L+ C + + G Q+HS +K G V V N++++MYAKC L NA
Sbjct: 388 MAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAE 447
Query: 355 LVFK------------------ELGKNADS------------VSWNSIIAACLQHNQAEE 384
L+F ++G A + ++WN+++ A +QH E+
Sbjct: 448 LIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEED 507
Query: 385 LFRLFSRMLASQ-IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
+++S ML + + PD +T+ + CA + + ++ Q+ + K GL D V+N ++
Sbjct: 508 GLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVI 567
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
+Y KCG + ARK F+F+ D+VSW+++I GY+Q G G +A+++F + + G P+ +
Sbjct: 568 TMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYI 627
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
+ V VL+ CSH GLVEEG + +M+ ++ I P EH SC+VDLL RAG + EA++ I++
Sbjct: 628 SYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDE 687
Query: 564 MACDADIVVWKSLLAS 579
M VW +LL++
Sbjct: 688 MPMKPTAEVWGALLSA 703
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 238/495 (48%), Gaps = 52/495 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S+L K EAL + +R +TY ++AC+ L SL+ G+++H ++
Sbjct: 260 NMVISALSKSGRVREALDMV-VDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVI 318
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D + + ++ +Y KCG ++A+ F + RN VSWT +I G Q +++++
Sbjct: 319 RNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVE 378
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ QM + QF ++I C +CLG QLH+ +KS H ++ N+LI+MY
Sbjct: 379 LFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYA 438
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + +A +F+ +A +D+ SW MI A+S++G +
Sbjct: 439 KCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAK---------------------- 476
Query: 243 SVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLT 301
AR F+++ + ++ +WNA++ H + + ++S+M +++++PD +T
Sbjct: 477 ---------AREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVT 527
Query: 302 VHSLL--CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+L CA IG L G Q+ + +K+G + V NA++TMY+KC + A F
Sbjct: 528 YVTLFRGCADIGANKL--GDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDF 585
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE- 418
L + D VSWN++I QH ++ +F +L KPD+I++ V+ C+ +E
Sbjct: 586 LSRK-DLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEE 644
Query: 419 ------MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWS 471
M+ + H GL + ++D+ + G L A+ L + M P W
Sbjct: 645 GKFYFDMMKRDHN--ISPGLEH----FSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWG 698
Query: 472 SLILGYAQFGCGDEA 486
+L+ G D A
Sbjct: 699 ALLSACKTHGNNDLA 713
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 38/191 (19%)
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR--------- 456
D + +C ++L LH + GLA VF+ N L+ Y+ CG+L AR
Sbjct: 30 DALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITE 89
Query: 457 -----------------------KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
+LF M DV SW++++ GY Q G AL +F M
Sbjct: 90 PNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSM 149
Query: 494 RSLGVS-PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAG 552
R G S PN T V+ +C +G E L L ++ +++ + + +VD+L R G
Sbjct: 150 RQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLL-SKFDSQDDPDVQTALVDMLVRCG 208
Query: 553 CVHEAEDFINQ 563
A DF ++
Sbjct: 209 ----AMDFASK 215
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 281/536 (52%), Gaps = 33/536 (6%)
Query: 47 SLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTA 106
+L+SL G+++H I+ + ++ ++ Y L DA + + + W
Sbjct: 105 NLKSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNL 164
Query: 107 MIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE 166
+I+ +N +A+ Y QM G+ P +FT+ S++KAC + G++LHA + S
Sbjct: 165 LISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASC 224
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
G +L N+L++MY K + AR +F + +D SW +MI+ ++ G EA F
Sbjct: 225 LGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFG 284
Query: 227 EMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
+M G I N I +WN + G N EA+ L
Sbjct: 285 KMRVEG---------------------IELNII------TWNTIAGGCVQSGNFEEALEL 317
Query: 287 FSEMRDRELLPDGLTVHSLLCAC--IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
S MR + D + L AC IG + L G ++H I+ +D V NA++TMY
Sbjct: 318 LSHMRSYGIDMDSVATIIGLGACSHIGAIKL--GREIHGSAIRSFYDGVDNVKNALITMY 375
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
++C L +A +F+ + + ++WNS+++ +++EE LF ML S I+P+++T
Sbjct: 376 SRCKYLRHAYNLFQST-RTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVTI 434
Query: 405 NDVMGACAKMASLEMVTQLHCYI-TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
++ CA++A+L+ + HCYI + G + + N L+D+Y + G + A++LF+ +
Sbjct: 435 ASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSIS 494
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
D V+++SLI GY G G EALKLF M+ + P+ VT+V VL+ACSH GLV EG+
Sbjct: 495 RRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIK 554
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
L+ +M + YGIIP EH +C+VDL RAG +H+A++ I +M +W +LL +
Sbjct: 555 LFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATLLGA 610
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/460 (24%), Positives = 194/460 (42%), Gaps = 83/460 (18%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N +SS + L+ EAL AY + T+ IRP TY ++ AC + G+K+H
Sbjct: 163 NLLISSYVRNGLHGEALSAY---KQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHAS 219
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
I S ++ + N +++MY K G L AR F+ M +R+ VSW MI+G + +A
Sbjct: 220 INASCLGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEA 279
Query: 121 IKLYIQMLQSGVMPGQFTFGSI-----------------------------------IKA 145
+L+ +M G+ T+ +I + A
Sbjct: 280 FELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGA 339
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
CS +G++ LGR++H I+S + +NALI MY++ + A N+F K++ +W
Sbjct: 340 CSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITW 399
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------- 254
SM++ ++ + EA F EML G +PN S+ C+ A +
Sbjct: 400 NSMLSGYTHMDRSEEASFLFREMLLSGI-EPNYVTIASILPLCARVANLQHGKEFHCYIL 458
Query: 255 ------------------------------LFNEIDSPDLASWNALIAGVASHSNANEAM 284
LF+ I D ++ +LIAG EA+
Sbjct: 459 RRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREAL 518
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTM 343
LF EM+ R + PD +T+ ++L AC + +G+++ + G + ++ +
Sbjct: 519 KLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDL 578
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ + +L A + + S W +++ AC H AE
Sbjct: 579 FGRAGLLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAE 618
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 174/542 (32%), Positives = 277/542 (51%), Gaps = 38/542 (7%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNM--YGKCGSLEDARMGFDKMPQ 98
L+S C S ++L +++H I+ + + ++ G+L A + F+ + Q
Sbjct: 38 LLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQ 94
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
N W MI G S + AI Y++ML GV P +TF ++K+C+ +G+ G+Q+
Sbjct: 95 PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H HV+K S +LI MY + + A VFS + +D S+ ++I ++ G
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRG-- 212
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHS 278
C + AR LF EI D SWNA+IAG A
Sbjct: 213 -----------------------------CLDDARRLFEEIPVRDAVSWNAMIAGYAQSG 243
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
EA++ F EM+ + P+ T+ ++L AC +L G V S+I G SN+ + N
Sbjct: 244 RFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVN 303
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
A++ MY+KC L A +F+ + + D +SWN +I N +E LF +M S ++
Sbjct: 304 ALIDMYSKCGDLDKARDLFEGICEK-DIISWNVMIGGYSHMNSYKEALALFRKMQQSNVE 362
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF-DVFVMNGLMDIYIKCGSLGSARK 457
P+ +TF ++ ACA + +L++ +H YI K L + + L+D+Y KCG++ +A++
Sbjct: 363 PNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQ 422
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
+F M+ + SW+++I G A G + AL+LF +MR G P+ +T VGVL+ACSH GL
Sbjct: 423 VFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGL 482
Query: 518 VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
VE G + M +Y I P +H C++DLL RAG EAE + M D +W SLL
Sbjct: 483 VELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLL 542
Query: 578 AS 579
+
Sbjct: 543 GA 544
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 186/420 (44%), Gaps = 74/420 (17%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL---------- 86
T+ L+ +C+ + + Q G+++H H+L + D + ++NMY + G L
Sbjct: 134 TFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKS 193
Query: 87 ---------------------EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+DAR F+++P R+ VSW AMIAG +Q+ + +A+ +
Sbjct: 194 SLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQ 253
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M ++ V P + T +++ AC+ GS+ LG + + + GS+L NALI MY+K
Sbjct: 254 EMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCG 313
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ AR++F GI KD+ SW MI +S + EAL F +M +PN+ F S+
Sbjct: 314 DLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKM-QQSNVEPNDVTFVSIL 372
Query: 246 SACSNF-----------------------------------------ARILFNEIDSPDL 264
AC+ A+ +F + L
Sbjct: 373 PACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSL 432
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
SWNA+I+G+A H +AN A+ LF +MRD PD +T +L AC + G Q S
Sbjct: 433 GSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSS 492
Query: 325 IIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+++ + ++ + + + A + K + D W S++ AC H E
Sbjct: 493 MVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVE 552
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 164/318 (51%), Gaps = 16/318 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + + EAL + N+ ST ++SAC+ SL+LG V I
Sbjct: 233 NAMIAGYAQSGRFEEALAFFQ-EMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIE 291
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ L N +++MY KCG L+ AR F+ + +++++SW MI G S +A+
Sbjct: 292 DHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALA 351
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG-SHLIAQNALIAMY 181
L+ +M QS V P TF SI+ AC+ LG++ LG+ +HA++ K G ++ +LI MY
Sbjct: 352 LFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMY 411
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K I A+ VF+G+ K + SW +MI+ + G+ AL F +M G ++P++ F
Sbjct: 412 AKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEG-FEPDDITF 470
Query: 242 GSVFSACSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
V SACS+ F+ ++ + SP L + +I + +EA +L M+
Sbjct: 471 VGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEAL---MK 527
Query: 292 DRELLPDGLTVHSLLCAC 309
+ E+ PDG SLL AC
Sbjct: 528 NMEMKPDGAIWGSLLGAC 545
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 169/567 (29%), Positives = 286/567 (50%), Gaps = 43/567 (7%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-NVVSWTAMIAGCS 112
G+++H +I+ + D L+ +++ Y KCG +AR F K+ R N+V+W MI G
Sbjct: 158 GKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFG 217
Query: 113 QNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
+N ++++ Y+ V +F + AC V G+Q+H IK
Sbjct: 218 ENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPY 277
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML--- 229
+L+ MY K I A VF+ + K++ W ++I+A+ GY +AL + +M
Sbjct: 278 VHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCT 337
Query: 230 ----------------HHGAYQPNEFIFGSVFS--------------------ACSNFAR 253
G Y I + SN+A
Sbjct: 338 VLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYAN 397
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
+F+ + D+ +W ++I+G + EA+ F M + PD + S++ AC G
Sbjct: 398 SIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLE 457
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSI 372
+ G +H ++IK G +V V +++L MY+K A +F ++ KN V+WNSI
Sbjct: 458 KVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNL--VAWNSI 515
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
I+ ++N + LFS++L + + PD ++F V+ A + +A+L +H Y+ + +
Sbjct: 516 ISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWI 575
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
FD+ V N L+D+YIKCG L A+ +F + ++V+W+S+I GY G +A++LF
Sbjct: 576 PFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDE 635
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAG 552
MRS G+ P+ VT + +L++C+H GL+EEGLHL+ +M+ ++GI P EH +VDL RAG
Sbjct: 636 MRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAG 695
Query: 553 CVHEAEDFINQMACDADIVVWKSLLAS 579
C+ +A F+ M + D +W SLL S
Sbjct: 696 CLGDAYSFVKNMPVEPDRSIWLSLLCS 722
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 152/620 (24%), Positives = 290/620 (46%), Gaps = 76/620 (12%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+ SL +Q Y EAL Y + + TY L+ AC+SL +LQ G+ +H I+ +
Sbjct: 28 IKSLVQQRQYIEALKLY----TKSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTG 83
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-----NVVSWTAMIAGCSQNYQENDA 120
D + + ++N+Y KCG+ DA FD++P+ +V W ++I G + Q +
Sbjct: 84 LHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEG 143
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ + +M SG G+Q+H++++++ + ALI
Sbjct: 144 MVQFGRMQSSGYKE--------------------GKQIHSYIVRNMLNFDPFLETALIDT 183
Query: 181 YTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLG-------YELEA----------- 221
Y K R +AR +F + R ++ +W MI F + G Y L A
Sbjct: 184 YFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSS 243
Query: 222 ------------LCHFNEMLHHGA----YQPNEFIFGSV---FSACS--NFARILFNEID 260
F + +H A ++ + ++ S+ + C A +FNE+
Sbjct: 244 FTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVP 303
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GM 319
++ WNALI+ + A +A+ ++ +M+ +L D T+ ++L + LY G
Sbjct: 304 DKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSS-SMAGLYDLGR 362
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+H+ I+K S++ + +A+LTMY+K A +F + K D V+W S+I+ Q+
Sbjct: 363 LIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTM-KERDVVAWGSVISGFCQN 421
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+ +E F M A +KPD ++ AC + +++ +H ++ K+GL DVFV
Sbjct: 422 RKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVA 481
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
+ L+D+Y K G A +F+ M ++V+W+S+I Y + D ++ LF+++ +
Sbjct: 482 SSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLY 541
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC-SCVVDLLARAGCVHEAE 558
P+ V+ VL A S V + +G ++ + + IP + ++D+ + G + A+
Sbjct: 542 PDSVSFTSVLAAISSVAALLKGKSVHGYLVRLW--IPFDLQVENTLIDMYIKCGLLKYAQ 599
Query: 559 DFINQMACDADIVVWKSLLA 578
+++ + ++V W S++
Sbjct: 600 HIFERIS-EKNLVAWNSMIG 618
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/519 (25%), Positives = 248/519 (47%), Gaps = 55/519 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + + L+ +L Y ++ N+++ S++ +SAC + G++VH +
Sbjct: 210 NVMIGGFGENGLWENSLEYYLLAKTE-NVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAI 268
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D + +L MYGKC +E A F+++P + + W A+I+ N DA++
Sbjct: 269 KVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALR 328
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+Y QM V+ FT +++ + S G LGR +H ++K S + Q+AL+ MY+
Sbjct: 329 IYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYS 388
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
KF A ++FS + +DV +WGS+I+ F + EAL F M +P+ I
Sbjct: 389 KFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAM-EADLVKPDSDIMA 447
Query: 243 SVFSACSNFARI----------------------------------------LFNEIDSP 262
S+ SAC+ ++ +F+++
Sbjct: 448 SIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLK 507
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+L +WN++I+ ++ + +++LFS++ +L PD ++ S+L A L +G VH
Sbjct: 508 NLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVH 567
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
Y++++ ++ V N ++ MY KC +L A +F+ + + + V+WNS+I H +
Sbjct: 568 GYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEK-NLVAWNSMIGGYGSHGEC 626
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY---ITKTGLAFDVFVM 439
+ LF M +S IKPD +TF ++ +C +E LH + K G+ +
Sbjct: 627 SKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIE--EGLHLFEMMKMKFGIEPRMEHY 684
Query: 440 NGLMDIYIKCGSLGSARKLFNFMEN----PDVVSWSSLI 474
++D+Y + G LG A ++F++N PD W SL+
Sbjct: 685 VNIVDLYGRAGCLGDA---YSFVKNMPVEPDRSIWLSLL 720
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 166/335 (49%), Gaps = 19/335 (5%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPST--YAGLISACSSLRSLQLGRKVHDHILL 63
+S C+ Y EAL DF + ++P + A +ISAC+ L + LG +H ++
Sbjct: 415 ISGFCQNRKYKEAL---DFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIK 471
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
S Q DV + + +L+MY K G E A F MP +N+V+W ++I+ +N + +I L
Sbjct: 472 SGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINL 531
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ Q+L++ + P +F S++ A S + ++ G+ +H ++++ L +N LI MY K
Sbjct: 532 FSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIK 591
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
+ A+++F I+ K++ +W SMI + G +A+ F+EM G +P++ F S
Sbjct: 592 CGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGI-KPDDVTFLS 650
Query: 244 VFSACSNFARI-----LFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
+ S+C++ I LF + P + + ++ +A S M
Sbjct: 651 LLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNM--- 707
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
+ PD SLLC+C L L G V + ++ M
Sbjct: 708 PVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNM 742
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 170/581 (29%), Positives = 292/581 (50%), Gaps = 42/581 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T ++ +C++L ++ LGR VH + DV + + ++ MY G L DAR FD M
Sbjct: 143 TLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGM 202
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P R+ V W M+ G + A++L+ M SG P T + C+ + G
Sbjct: 203 PWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGV 262
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
QLH+ +K + N L++MY K + DA +F + R D+ +W MI+ + G
Sbjct: 263 QLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNG 322
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
EAL F +ML GA +P+ S+ A ++
Sbjct: 323 LLDEALGLFCDMLRSGA-RPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLV 381
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR L++ + D+ + +I+G + + +A+ +F + ++ +
Sbjct: 382 SALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIK 441
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P+ +TV S+L AC L G ++H Y+++ ++ V +A++ MYAKC L + +
Sbjct: 442 PNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYI 501
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F ++ D V+WNS+I++ Q+ + +E LF +M IK +++T + + ACA + +
Sbjct: 502 FSKMSLK-DEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPA 560
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
+ ++H I K + D+F + L+D+Y KCG++ A ++F FM + + VSW+S+I
Sbjct: 561 IYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISA 620
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y G E++ RM+ G P+ VT + +++AC+H GLVEEGL L++ M EY I P
Sbjct: 621 YGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAP 680
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
EH +C+VDL +R+G + +A FI M D +W +LL
Sbjct: 681 RMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALL 721
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 151/591 (25%), Positives = 268/591 (45%), Gaps = 58/591 (9%)
Query: 40 GLISACSSLRSLQLGRKVHDHILLSKCQPD---VVLQNHILNMYGKCGSLEDARMGFDKM 96
L+ C S L LG ++H ++S + + L +L MY DA F +
Sbjct: 37 ALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSAL 96
Query: 97 PQR---NVVSWTAMIAGCSQNYQENDAIKLYIQML--QSGVMPGQFTFGSIIKACSGLGS 151
P+ + + W +I G + + A+ Y++M + P T ++K+C+ LG+
Sbjct: 97 PRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGA 156
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
V LGR +H + S + +ALI MY+ + DAR+ F G+ +D W M+
Sbjct: 157 VSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDG 216
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL---------------- 255
+ K G A+ F M G +PN S C+ A +L
Sbjct: 217 YIKAGDVGGAVRLFRNMRVSGC-EPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQ 275
Query: 256 ------------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
F + DL +WN +I+G + +EA+ LF +M
Sbjct: 276 EVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDML 335
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
PD +T+ SLL A L QG +VH YII+ + + +A++ +Y KC +
Sbjct: 336 RSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVR 395
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A ++ + + D V +++I+ + + +E+ ++F +L IKP+ +T V+ AC
Sbjct: 396 TARNLY-DAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPAC 454
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
A +++L + ++H Y+ + +V + LMD+Y KCG L + +F+ M D V+W+
Sbjct: 455 ASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWN 514
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
S+I ++Q G EAL LF +M G+ N VT+ L+AC+ + + G ++ ++
Sbjct: 515 SMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKG 574
Query: 532 YGIIPTREHC---SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P + S ++D+ A+ G + A M D + V W S++++
Sbjct: 575 ----PIKADIFAESALIDMYAKCGNMELALRVFEFMP-DKNEVSWNSIISA 620
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 227/481 (47%), Gaps = 44/481 (9%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T A +S C++ L G ++H + + +V + N +L+MY KC L+DA F+
Sbjct: 243 ATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFEL 302
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+P+ ++V+W MI+GC QN ++A+ L+ ML+SG P T S++ A + L + G
Sbjct: 303 LPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQG 362
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+++H ++I++ +AL+ +Y K + ARN++ DV ++I+ +
Sbjct: 363 KEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLN 422
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------------------- 254
G +AL F +L +PN SV AC++ + +
Sbjct: 423 GMSEKALQMFRYLLEQ-CIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYV 481
Query: 255 -------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+F+++ D +WN++I+ + + EA+ LF +M +
Sbjct: 482 ESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGI 541
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
+ +T+ S L AC +Y G ++H IIK +++ +A++ MYAKC + AL
Sbjct: 542 KYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALR 601
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF E + + VSWNSII+A H +E RM KPDH+TF ++ ACA
Sbjct: 602 VF-EFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAG 660
Query: 416 SLEMVTQL-HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSL 473
+E QL C + +A + ++D+Y + G L A + M PD W +L
Sbjct: 661 LVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGAL 720
Query: 474 I 474
+
Sbjct: 721 L 721
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 198/438 (45%), Gaps = 58/438 (13%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + L +EAL + + R T L+ A + L L+ G++VH +I+
Sbjct: 312 NGMISGCVQNGLLDEALGLF-CDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYII 370
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D L + ++++Y KC + AR +D +VV + +I+G N A++
Sbjct: 371 RNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQ 430
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ +L+ + P T S++ AC+ + ++ LG+++H +V+++ + ++AL+ MY
Sbjct: 431 MFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYA 490
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K R+ + +FS ++ KD +W SMI++FS+ G EAL F +M G + N
Sbjct: 491 KCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEG-IKYNNVTIS 549
Query: 243 SVFSACSNFARILFNE------IDSP---------------------DLA---------- 265
S SAC++ I + + I P +LA
Sbjct: 550 SALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDK 609
Query: 266 ---SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV- 321
SWN++I+ +H E++S M++ PD +T +L+ AC + +G+Q+
Sbjct: 610 NEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLF 669
Query: 322 ----HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
Y+I + ++ +Y++ L A+ ++ D+ W +++ AC
Sbjct: 670 QCMTKEYLIAPRMEHFA----CMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACR 725
Query: 378 QHNQAE-------ELFRL 388
H E ELF+L
Sbjct: 726 VHRNVELADIASQELFKL 743
>gi|168008904|ref|XP_001757146.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691644|gb|EDQ78005.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 272/527 (51%), Gaps = 46/527 (8%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y ++ C + L ++VHD IL S + + N ++ +Y +CG ++DAR FDK+
Sbjct: 2 YVDVLQRCFKHKDLTSVKQVHDCILKSGMDQNPYVANKLMRVYIRCGKVQDARHVFDKLV 61
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
++NV +WT MI G +++ + DAI++Y QM Q G P + T+ SI+KAC+ + G++
Sbjct: 62 KKNVFNWTTMIGGYAEHGRPADAIEVYNQMRQEGGRPNEVTYLSILKACACPVGLKWGKE 121
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+HAH+ S + Q AL+ MY K I DAR VF +A ++V +W MI ++ G+
Sbjct: 122 IHAHISHGGFRSDVPVQTALVNMYAKSGSIKDARLVFDEMAERNVITWNVMIGGLAQHGF 181
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVF--SACS-------------------------- 249
EA F +M G + P+ + S+ +ACS
Sbjct: 182 GQEAFSLFLQMQEEG-FVPDSTTYLSILTATACSSAGALGWVKEVHRHAVKAGFDSDMRV 240
Query: 250 --------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+ AR++F + D+ SW+A+I G+A + +EA SLF +M+ +
Sbjct: 241 CNALVHVYSKSGSVDDARLVFEGMLDRDVISWSAMIGGLAQNGCGHEAFSLFLKMQREGV 300
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
+P+ T S+L A L QVH++ K G S+ VCNA++ MYAK + +A L
Sbjct: 301 IPNVTTYVSILTASASAGALEWVKQVHNHARKAGLGSDFRVCNALVHMYAKSGSIDDARL 360
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF ++ + +WN++I QH +E F LF RM + PD IT+ ++ A A
Sbjct: 361 VFDQMSVR-NVFTWNAMIGGLAQHGCGQEAFSLFLRMRREGVVPDAITYMSILNASASTG 419
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+L V ++H + GL DV V N L+ +Y K GS+ AR +F+ M DV++W+++I
Sbjct: 420 ALGWVKEVHRQAVQAGLDSDVRVGNALVHMYCKTGSISDARLMFDGMVERDVITWTAMIS 479
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL--VEE 520
G AQ CG EA LF +M+ G P T +L C+ GL VEE
Sbjct: 480 GLAQNECGQEAFSLFLQMQREGFIPVATTYASILNVCTSTGLAMVEE 526
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 135/434 (31%), Positives = 222/434 (51%), Gaps = 47/434 (10%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP+ TY ++ AC+ L+ G+++H HI + DV +Q ++NMY K GS++DAR+
Sbjct: 97 RPNEVTYLSILKACACPVGLKWGKEIHAHISHGGFRSDVPVQTALVNMYAKSGSIKDARL 156
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII--KACSGL 149
FD+M +RNV++W MI G +Q+ +A L++QM + G +P T+ SI+ ACS
Sbjct: 157 VFDEMAERNVITWNVMIGGLAQHGFGQEAFSLFLQMQEEGFVPDSTTYLSILTATACSSA 216
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G++ +++H H +K+ S + NAL+ +Y+K + DAR VF G+ +DV SW +MI
Sbjct: 217 GALGWVKEVHRHAVKAGFDSDMRVCNALVHVYSKSGSVDDARLVFEGMLDRDVISWSAMI 276
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPN-----------------EFI-----------F 241
++ G EA F +M G PN E++
Sbjct: 277 GGLAQNGCGHEAFSLFLKMQREGVI-PNVTTYVSILTASASAGALEWVKQVHNHARKAGL 335
Query: 242 GSVFSACSNF------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
GS F C+ AR++F+++ ++ +WNA+I G+A H EA SLF
Sbjct: 336 GSDFRVCNALVHMYAKSGSIDDARLVFDQMSVRNVFTWNAMIGGLAQHGCGQEAFSLFLR 395
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
MR ++PD +T S+L A L +VH ++ G DS+V V NA++ MY K
Sbjct: 396 MRREGVVPDAITYMSILNASASTGALGWVKEVHRQAVQAGLDSDVRVGNALVHMYCKTGS 455
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ +A L+F + + D ++W ++I+ Q+ +E F LF +M P T+ ++
Sbjct: 456 ISDARLMFDGMVER-DVITWTAMISGLAQNECGQEAFSLFLQMQREGFIPVATTYASILN 514
Query: 410 ACAKMASLEMVTQL 423
C L MV ++
Sbjct: 515 VCTS-TGLAMVEEI 527
>gi|255570402|ref|XP_002526160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534537|gb|EEF36236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 762
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 178/537 (33%), Positives = 274/537 (51%), Gaps = 44/537 (8%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+ ST ++SA +SL L G VH + +V + + ++NMY KC LE A+
Sbjct: 181 IKSTRSTLGSVLSAIASLTDLDFGLLVHAEAIKQGLDSNVYVGSSLINMYAKCKELEAAK 240
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD + +RNVV W AM+ G +QN ++ I+L M G P +FT+ SI+ AC+ L
Sbjct: 241 KVFDPIDERNVVLWNAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLE 300
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
V GRQLH+ +IK++ S+L NALI MY K + DAR F + +D SW ++I
Sbjct: 301 HVEGGRQLHSIIIKNKFASNLFVGNALIDMYAKSGFLEDARKQFELMKSRDNVSWNAIIV 360
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------- 251
+ + E+EA F +M H P+E S+ SAC+N
Sbjct: 361 GYVQEEDEVEAFLMFQKM-HLVGILPDEVSLASILSACANVEGFEQGKPIHCLSVKSGLE 419
Query: 252 ---------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
A+ + + + S NALIAG A N EA+ LF +M
Sbjct: 420 TSLYAGSSLIDMYAKCGDVGSAQKILKSMPEHSVVSINALIAGYAP-VNLEEAIILFEKM 478
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN-AILTMYAKCSV 349
+ L P +T SLL C G L G+Q+H I+K G + ++L MY K
Sbjct: 479 QAEGLNPSEITFASLLDGCGGPEQLILGIQIHCLILKRGLQYDDDFLGVSLLGMYVKSLR 538
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+A ++F E ++ W ++I+ Q+N ++E + + M + PD TF V+
Sbjct: 539 KTDARILFSEFSNPKSTILWTAMISGLAQNNCSDEALQFYQEMRSCNALPDQATFVSVLR 598
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP-DVV 468
ACA ++S+ ++H I +TGL D + L+D+Y KCG + S+ ++F M + DV+
Sbjct: 599 ACAVLSSIGDGREIHSLIFRTGLDLDESTCSALIDMYAKCGDVRSSMQVFEDMHSKNDVI 658
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
SW+S+I+G+A+ G + AL++F M+ V P+ VT +GVLTACSH G V EG ++
Sbjct: 659 SWNSMIVGFAKNGYAENALRIFNEMKQAHVIPDDVTFLGVLTACSHAGRVSEGRQIF 715
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 164/553 (29%), Positives = 269/553 (48%), Gaps = 46/553 (8%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
+PD V ++N Y G L+DA F +MP NVV+W MI+G +Q E +I+L+
Sbjct: 116 EPDQVAFVTVINAYVALGRLDDALGLFFQMPNPNVVAWNVMISGHAQRGHETKSIELFCN 175
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M ++G+ + T GS++ A + L + G +HA IK S++ ++LI MY K
Sbjct: 176 MRKAGIKSTRSTLGSVLSAIASLTDLDFGLLVHAEAIKQGLDSNVYVGSSLINMYAKCKE 235
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+ A+ VF I ++V W +M+ +++ GY E + + M G + P+EF + S+ S
Sbjct: 236 LEAAKKVFDPIDERNVVLWNAMVGGYAQNGYAHEVIELLSNMKSCG-FHPDEFTYTSILS 294
Query: 247 AC-------------------------------------SNF---ARILFNEIDSPDLAS 266
AC S F AR F + S D S
Sbjct: 295 ACACLEHVEGGRQLHSIIIKNKFASNLFVGNALIDMYAKSGFLEDARKQFELMKSRDNVS 354
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WNA+I G + EA +F +M +LPD +++ S+L AC QG +H +
Sbjct: 355 WNAIIVGYVQEEDEVEAFLMFQKMHLVGILPDEVSLASILSACANVEGFEQGKPIHCLSV 414
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
K G ++++ ++++ MYAKC + +A + K + +++ VS N++IA N EE
Sbjct: 415 KSGLETSLYAGSSLIDMYAKCGDVGSAQKILKSMPEHS-VVSINALIAGYAPVN-LEEAI 472
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV-FVMNGLMDI 445
LF +M A + P ITF ++ C L + Q+HC I K GL +D F+ L+ +
Sbjct: 473 ILFEKMQAEGLNPSEITFASLLDGCGGPEQLILGIQIHCLILKRGLQYDDDFLGVSLLGM 532
Query: 446 YIKCGSLGSARKLFNFMENPD-VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
Y+K AR LF+ NP + W+++I G AQ C DEAL+ + MRS P+ T
Sbjct: 533 YVKSLRKTDARILFSEFSNPKSTILWTAMISGLAQNNCSDEALQFYQEMRSCNALPDQAT 592
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
V VL AC+ + + +G ++ ++ G+ CS ++D+ A+ G V + M
Sbjct: 593 FVSVLRACAVLSSIGDGREIHSLI-FRTGLDLDESTCSALIDMYAKCGDVRSSMQVFEDM 651
Query: 565 ACDADIVVWKSLL 577
D++ W S++
Sbjct: 652 HSKNDVISWNSMI 664
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 150/449 (33%), Positives = 239/449 (53%), Gaps = 8/449 (1%)
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+K Y + G+ P +FTF ++ C+ L SV GR +H +V+K ALI M
Sbjct: 3 LKCYGLLWSHGMWPNEFTFAIVLSGCARLDSVEFGRLVHCNVVKLGFEFSSFCVGALIDM 62
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K +R+ D R VF G D SW S+IA + K G EAL F +M G +P++
Sbjct: 63 YAKNNRMSDCRRVFDGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGR-EPDQVA 121
Query: 241 FGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
F +V +A R+ LF ++ +P++ +WN +I+G A + +++ LF MR +
Sbjct: 122 FVTVINAYVALGRLDDALGLFFQMPNPNVVAWNVMISGHAQRGHETKSIELFCNMRKAGI 181
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
T+ S+L A L G+ VH+ IK G DSNV V ++++ MYAKC L A
Sbjct: 182 KSTRSTLGSVLSAIASLTDLDFGLLVHAEAIKQGLDSNVYVGSSLINMYAKCKELEAAKK 241
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF + + + V WN+++ Q+ A E+ L S M + PD T+ ++ ACA +
Sbjct: 242 VFDPIDER-NVVLWNAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLE 300
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+E QLH I K A ++FV N L+D+Y K G L ARK F M++ D VSW+++I+
Sbjct: 301 HVEGGRQLHSIIIKNKFASNLFVGNALIDMYAKSGFLEDARKQFELMKSRDNVSWNAIIV 360
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
GY Q EA +F +M +G+ P+ V+L +L+AC++V E+G ++ + + G+
Sbjct: 361 GYVQEEDEVEAFLMFQKMHLVGILPDEVSLASILSACANVEGFEQGKPIH-CLSVKSGLE 419
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQM 564
+ S ++D+ A+ G V A+ + M
Sbjct: 420 TSLYAGSSLIDMYAKCGDVGSAQKILKSM 448
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 148/486 (30%), Positives = 250/486 (51%), Gaps = 18/486 (3%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+A ++S C+ L S++ GR VH +++ + +++MY K + D R FD
Sbjct: 20 TFAIVLSGCARLDSVEFGRLVHCNVVKLGFEFSSFCVGALIDMYAKNNRMSDCRRVFDGG 79
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ VSWT++IAG + +A++++ QM + G P Q F ++I A LG +
Sbjct: 80 VSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQVAFVTVINAYVALGRLDDAL 139
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS----WGSMIAAF 212
L + +++A N +I+ + + + +F + + + S GS+++A
Sbjct: 140 GLFFQM----PNPNVVAWNVMISGHAQRGHETKSIELFCNMRKAGIKSTRSTLGSVLSAI 195
Query: 213 SKL-GYELEALCH---FNEMLHHGAYQPNEFIFGSVFSACSNF--ARILFNEIDSPDLAS 266
+ L + L H + L Y + I ++++ C A+ +F+ ID ++
Sbjct: 196 ASLTDLDFGLLVHAEAIKQGLDSNVYVGSSLI--NMYAKCKELEAAKKVFDPIDERNVVL 253
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WNA++ G A + A+E + L S M+ PD T S+L AC + G Q+HS II
Sbjct: 254 WNAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLEHVEGGRQLHSIII 313
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
K F SN+ V NA++ MYAK L +A F EL K+ D+VSWN+II +Q E F
Sbjct: 314 KNKFASNLFVGNALIDMYAKSGFLEDARKQF-ELMKSRDNVSWNAIIVGYVQEEDEVEAF 372
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
+F +M I PD ++ ++ ACA + E +HC K+GL ++ + L+D+Y
Sbjct: 373 LMFQKMHLVGILPDEVSLASILSACANVEGFEQGKPIHCLSVKSGLETSLYAGSSLIDMY 432
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KCG +GSA+K+ M VVS ++LI GYA +EA+ LF +M++ G++P+ +T
Sbjct: 433 AKCGDVGSAQKILKSMPEHSVVSINALIAGYAPVNL-EEAIILFEKMQAEGLNPSEITFA 491
Query: 507 GVLTAC 512
+L C
Sbjct: 492 SLLDGC 497
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 127/244 (52%), Gaps = 9/244 (3%)
Query: 16 NEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQ-PDVVL 72
EA++ ++ Q + PS T+A L+ C L LG ++H IL Q D L
Sbjct: 469 EEAIILFEKMQAEG---LNPSEITFASLLDGCGGPEQLILGIQIHCLILKRGLQYDDDFL 525
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQ-RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+L MY K DAR+ F + ++ + WTAMI+G +QN ++A++ Y +M
Sbjct: 526 GVSLLGMYVKSLRKTDARILFSEFSNPKSTILWTAMISGLAQNNCSDEALQFYQEMRSCN 585
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
+P Q TF S+++AC+ L S+ GR++H+ + ++ +ALI MY K + +
Sbjct: 586 ALPDQATFVSVLRACAVLSSIGDGREIHSLIFRTGLDLDESTCSALIDMYAKCGDVRSSM 645
Query: 192 NVFSGI-ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
VF + ++ DV SW SMI F+K GY AL FNEM P++ F V +ACS+
Sbjct: 646 QVFEDMHSKNDVISWNSMIVGFAKNGYAENALRIFNEM-KQAHVIPDDVTFLGVLTACSH 704
Query: 251 FARI 254
R+
Sbjct: 705 AGRV 708
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S L + N +EAL Y + N +T+ ++ AC+ L S+ GR++H I +
Sbjct: 562 ISGLAQNNCSDEALQFYQ-EMRSCNALPDQATFVSVLRACAVLSSIGDGREIHSLIFRTG 620
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN-VVSWTAMIAGCSQNYQENDAIKLY 124
D + +++MY KCG + + F+ M +N V+SW +MI G ++N +A++++
Sbjct: 621 LDLDESTCSALIDMYAKCGDVRSSMQVFEDMHSKNDVISWNSMIVGFAKNGYAENALRIF 680
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+M Q+ V+P TF ++ ACS G V GRQ+
Sbjct: 681 NEMKQAHVIPDDVTFLGVLTACSHAGRVSEGRQI 714
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 185/556 (33%), Positives = 290/556 (52%), Gaps = 49/556 (8%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D+ + N IL+ Y K G L A M FD+MP+R+ VSW MI+G + + DA L+ M
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
+SG ++F ++K + + LG Q+H VIK + ++ ++L+ MY K +R+
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSK----------LGY-ELEA---------------- 221
DA F I+ + SW ++IA F + LG E++A
Sbjct: 154 DAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLL 213
Query: 222 ----LCHFNEMLH---------HGAYQPNEFIFGSVFSAC---SNFARILFNEIDSPDLA 265
C+ + +H H N I S ++ C S+ R+ S DL
Sbjct: 214 DDPMFCNLLKQVHAKVLKLGLQHEITICNAMI--SSYADCGSVSDAKRVFDGLGGSKDLI 271
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SWN++IAG + H A LF +M+ + D T LL AC G G +H +
Sbjct: 272 SWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMV 331
Query: 326 IKMGFDSNVPVCNAILTMYAK--CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
IK G + NA+++MY + + +AL +F+ L K+ D +SWNSII Q +E
Sbjct: 332 IKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESL-KSKDLISWNSIITGFAQKGLSE 390
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
+ + FS + +S+IK D F+ ++ +C+ +A+L++ Q+H TK+G + FV++ L+
Sbjct: 391 DAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLI 450
Query: 444 DIYIKCGSLGSARKLFNFMENP-DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+Y KCG + SARK F + + V+W+++ILGYAQ G G +L LF++M + V +
Sbjct: 451 VMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDH 510
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
VT +LTACSH GL++EGL L +ME Y I P EH + VDLL RAG V++A++ I
Sbjct: 511 VTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIE 570
Query: 563 QMACDADIVVWKSLLA 578
M + D +V K+ L
Sbjct: 571 SMPLNPDPMVLKTFLG 586
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 219/482 (45%), Gaps = 59/482 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+++ L+ +S++ LG +VH ++ + +V + + +++MY KC +EDA F ++
Sbjct: 103 SFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEI 162
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ N VSW A+IAG Q A L M +++ V TF ++ L
Sbjct: 163 SEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLL 222
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI-ARKDVTSWGSMIAAFSK 214
+Q+HA V+K + NA+I+ Y + DA+ VF G+ KD+ SW SMIA FSK
Sbjct: 223 KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSK 282
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------- 249
+ A F +M H + + + + + SACS
Sbjct: 283 HELKESAFELFIQMQRHWV-ETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTS 341
Query: 250 -----------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
A LF + S DL SWN++I G A + +A+ FS +R
Sbjct: 342 ATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRS 401
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
E+ D +LL +C TL G Q+H+ K GF SN V ++++ MY+KC ++ +
Sbjct: 402 SEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIES 461
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A F+++ +V+WN++I QH + LFS+M +K DH+TF ++ AC+
Sbjct: 462 ARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACS 521
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI-------KCGSLGSARKLFNFME-N 464
++ +L L V+ + M+ Y + G + A++L M N
Sbjct: 522 HTGLIQEGLEL------LNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLN 575
Query: 465 PD 466
PD
Sbjct: 576 PD 577
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 206/461 (44%), Gaps = 43/461 (9%)
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H + IK S + N ++ Y KF + A +F + ++D SW +MI+ ++ G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 219 LEALCHFN------------------------------EMLH----HGAYQPNEFIFGSV 244
+A C F E +H G Y+ N ++ S+
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 245 FSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP-D 298
+ R+ F EI P+ SWNALIAG + A L M + + D
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
T LL + QVH+ ++K+G + +CNA+++ YA C + +A VF
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
LG + D +SWNS+IA +H E F LF +M ++ D T+ ++ AC+
Sbjct: 263 GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQI 322
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIK--CGSLGSARKLFNFMENPDVVSWSSLILG 476
LH + K GL N L+ +YI+ G++ A LF +++ D++SW+S+I G
Sbjct: 323 FGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITG 382
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
+AQ G ++A+K F+ +RS + + +L +CS + ++ G ++ + + G +
Sbjct: 383 FAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHA-LATKSGFVS 441
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
S ++ + ++ G + A Q++ V W +++
Sbjct: 442 NEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 195/419 (46%), Gaps = 47/419 (11%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ + T+A L++ L ++VH +L Q ++ + N +++ Y CGS+ DA+
Sbjct: 199 VTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAK 258
Query: 91 MGFDKMP-QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
FD + ++++SW +MIAG S++ + A +L+IQM + V +T+ ++ ACSG
Sbjct: 259 RVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGE 318
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD--RILDARNVFSGIARKDVTSWGS 207
G+ LH VIK A NALI+MY +F + DA ++F + KD+ SW S
Sbjct: 319 EHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNS 378
Query: 208 MIAAFSKLGYELEALCHFN------------------------------EMLH----HGA 233
+I F++ G +A+ F+ + +H
Sbjct: 379 IITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSG 438
Query: 234 YQPNEFIFGSV---FSACS--NFARILFNEIDSP-DLASWNALIAGVASHSNANEAMSLF 287
+ NEF+ S+ +S C AR F +I S +WNA+I G A H ++ LF
Sbjct: 439 FVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLF 498
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAK 346
S+M ++ + D +T ++L AC + +G+++ + + + + A + + +
Sbjct: 499 SQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGR 558
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP-DHITF 404
++ A + + + N D + + + C + E ++ + +L +I+P DH T+
Sbjct: 559 AGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLL--EIEPEDHFTY 615
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 127/270 (47%), Gaps = 25/270 (9%)
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
H Y IK G S++ V N IL Y K L A ++F E+ K DSVSWN++I+
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKR-DSVSWNTMISGYTSCG 80
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
+ E+ + LF+ M S D +F+ ++ A + ++ Q+H + K G +V+V +
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR------ 494
L+D+Y KC + A + F + P+ VSW++LI G+ Q A L M
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT 200
Query: 495 -SLGVSPNLVTLVGVLTACS-----HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLL 548
G L+TL+ C+ H +++ GL ++E I C+ ++
Sbjct: 201 MDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGL------QHEITI------CNAMISSY 248
Query: 549 ARAGCVHEAEDFINQMACDADIVVWKSLLA 578
A G V +A+ + + D++ W S++A
Sbjct: 249 ADCGSVSDAKRVFDGLGGSKDLISWNSMIA 278
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 84/157 (53%), Gaps = 2/157 (1%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ ++ L +A+ + + ++ + I++ ++ L+ +CS L +LQLG+++H
Sbjct: 377 NSIITGFAQKGLSEDAVKFFSYLRS-SEIKVDDYAFSALLRSCSDLATLQLGQQIHALAT 435
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-NVVSWTAMIAGCSQNYQENDAI 121
S + + + ++ MY KCG +E AR F ++ + + V+W AMI G +Q+ ++
Sbjct: 436 KSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSL 495
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
L+ QM V TF +I+ ACS G + G +L
Sbjct: 496 DLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 532
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 179/583 (30%), Positives = 298/583 (51%), Gaps = 42/583 (7%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSK--CQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
YA L+ C + + GR VH H++ S + D+ N +LNMY K G A FD
Sbjct: 431 YARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDG 490
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+P+RN+VS+ ++ G + + +A L+ ++ G QF +++K + ++ L
Sbjct: 491 LPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLA 550
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA---- 211
+HA K H + +ALI Y+ + DAR VF GI KD +W +M++
Sbjct: 551 WGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSEN 610
Query: 212 ---------FSKLGYELE-------------ALCHFNEMLHHGA--------YQPNEFIF 241
FSK+ + A+C + +L G Y ++
Sbjct: 611 DCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVY 670
Query: 242 GSV---FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
G++ ++ C N AR+ F + + D+ W+ +I+ A + +A LF M +
Sbjct: 671 GALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVS 730
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P+ ++ S+L AC L G Q+H++ IK+G +S + V NA++ +YAKCS + ++L +
Sbjct: 731 PNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEI 790
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F L ++ + VSWN+II + E +F M A+ + +T++ V+ ACA AS
Sbjct: 791 FSSL-RDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTAS 849
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
+ V Q+HC I K+ D V N L+D Y KCG + AR++F ++ D+VSW+++I G
Sbjct: 850 INHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISG 909
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
YA G A +LF M + N +T V +L+ C GLV +GL L+ M ++GI P
Sbjct: 910 YAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEP 969
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ EH +C+V LL RAG +++A +FI + +VW++LL+S
Sbjct: 970 SMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSS 1012
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 193/415 (46%), Gaps = 45/415 (10%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
++ P ++ A L S+ LG+ +H + + + + +L+MY KCG++EDAR+
Sbjct: 629 KLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARL 688
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
F+ + +V+ W+ MI+ +Q Q A +L+I+M++S V P +F+ S+++AC+ +
Sbjct: 689 AFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPL 748
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ LG+Q+H H IK H S L NALI +Y K + + +FS + + SW ++I
Sbjct: 749 LDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVG 808
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------------- 254
+SK G+ AL F EM + + + SV AC++ A I
Sbjct: 809 YSKSGFGEAALSVFREM-RAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNS 867
Query: 255 -----------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
+F + DL SWNA+I+G A H A A LF M
Sbjct: 868 DTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMS 927
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ + +T +LL C + QG+ + S + G + ++ I+ + + L
Sbjct: 928 KNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRL 987
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP-DHITF 404
+AL ++ ++ W +++++C+ H E FS +I+P D T+
Sbjct: 988 NDALNFIGDIPSAPSAMVWRALLSSCIVHKNVE--LGRFSAEKVLEIEPQDETTY 1040
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 132/291 (45%), Gaps = 21/291 (7%)
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV--CNAILTMYAKCSVLCNALL 355
D LL C+ R G VH ++++ G + + + N +L MY K +A
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF L + + VS+ +++ + EE LF R+ + + V+ M
Sbjct: 487 VFDGLPER-NMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMD 545
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+L + +H K G + FV + L+D Y CG + AR++F+ + D V+W++++
Sbjct: 546 TLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVS 605
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA--CSHVGLVEEGLH------LYRI 527
Y++ C + L++F++MR N L VL A C ++ +G+H LY
Sbjct: 606 CYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDT 665
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ YG ++D+ A+ G + +A +M + D+++W +++
Sbjct: 666 ERHVYG---------ALLDMYAKCGNIEDAR-LAFEMVTNDDVILWSLMIS 706
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 182/578 (31%), Positives = 280/578 (48%), Gaps = 68/578 (11%)
Query: 38 YAGLISACSS---LRSLQLGRKVHDHILLSKCQ-PDVVLQNHILNMYGKCGSLEDARMGF 93
YA ++S+ + +++ VH IL + Q P L NH+L Y K G L AR F
Sbjct: 12 YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71
Query: 94 DKMP-------------------------------QRNVVSWTAMIAGCSQNYQENDAIK 122
D+MP +R+ VS+ A+I G S +++
Sbjct: 72 DEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQ 131
Query: 123 LYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
LY +L + V P + T ++I S L LG +H V++ G++ + L+ MY
Sbjct: 132 LYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMY 191
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K I DAR VF + K V + ++I + C E
Sbjct: 192 AKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR--------CKMIED------------- 230
Query: 242 GSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
A+ LF + D +W ++ G+ + EA+ +F MR + D T
Sbjct: 231 ----------AKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
S+L AC +G Q+H+YI + ++ NV V +A++ MY+KC + A VF+ +
Sbjct: 281 FGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM- 339
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
+ +SW ++I Q+ +EE R FS M IKPD T V+ +CA +ASLE
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
Q HC +GL + V N L+ +Y KCGS+ A +LF+ M D VSW++L+ GYAQFG
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC 541
E + LF +M G+ P+ VT +GVL+ACS GLVE+G + M+ ++ I+P +H
Sbjct: 460 KAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHY 519
Query: 542 SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+C++DL +R+G EAE+FI QM D W +LL+S
Sbjct: 520 TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 131/245 (53%), Gaps = 2/245 (0%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
V+ L + L EAL + + I T+ +++AC +L + + G+++H +I +
Sbjct: 250 VTGLTQNGLQLEALDVFR-RMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTW 308
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ +V + + +++MY KC S+ A F +M RN++SWTAMI G QN +A++ +
Sbjct: 309 YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFS 368
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M G+ P FT GS+I +C+ L S+ G Q H + S ++ NAL+ +Y K
Sbjct: 369 EMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG 428
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I DA +F ++ D SW +++ +++ G E + F +ML +G +P+ F V
Sbjct: 429 SIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNG-LKPDGVTFIGVL 487
Query: 246 SACSN 250
SACS
Sbjct: 488 SACSR 492
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 123/273 (45%), Gaps = 44/273 (16%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+P T +IS+C++L SL+ G + H L+S + + N ++ +YGKCGS+EDA
Sbjct: 375 IKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAH 434
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+M + VSWTA++ G +Q + + I L+ +ML +G+ P TF ++ ACS G
Sbjct: 435 RLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAG 494
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
V E G FD + ++ + D + MI
Sbjct: 495 LV-------------EKGCDY------------FDSMQKDHDI---VPIDD--HYTCMID 524
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--------SNFARILFNEIDSP 262
+S+ G EA +M H P+ F + ++ S+C +A E D
Sbjct: 525 LYSRSGRFKEAEEFIKQMPH----SPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQ 580
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+ AS+ L + A+ E L MRDR++
Sbjct: 581 NPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQV 613
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 270/519 (52%), Gaps = 43/519 (8%)
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
+V+ W ++ Q + +A+ ++ M+ S V TF ++ +GL + LG+Q+H
Sbjct: 899 DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIH 958
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
V++S + N LI MY K + AR+VF + D+ SW +MI+ + G E
Sbjct: 959 GIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEE 1018
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------------- 251
++ F +L + P++F SV ACS+
Sbjct: 1019 CSVGMFVHLLRD-SLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTA 1077
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
A LF D DLASWNA++ G + +A+ L+ M++ D
Sbjct: 1078 LIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSD 1137
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+T+ + A G + L QG Q+H+ ++K GF+ ++ V + +L MY KC + +A VF
Sbjct: 1138 QITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFS 1197
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
E+ + D V+W ++I+ C+++ Q E + +M S+++PD TF ++ AC+ + +LE
Sbjct: 1198 EI-PSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALE 1256
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
Q+H I K AFD FVM L+D+Y KCG++ AR LF + SW+++I+G A
Sbjct: 1257 QGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLA 1316
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
Q G EAL+ F M+S GV P+ VT +GVL+ACSH GLV E + M+ YGI P
Sbjct: 1317 QHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEI 1376
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
EH SC+VD L+RAG + EAE I+ M +A ++++LL
Sbjct: 1377 EHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLL 1415
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 149/545 (27%), Positives = 256/545 (46%), Gaps = 21/545 (3%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ--RNVVSWTAMI 108
L LG++ H IL S PD + N+++ MY KCGSL AR FD P R++V+W A++
Sbjct: 672 LSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAIL 731
Query: 109 AGCSQNY-QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
+ + + + +D L+ + +S V + T + K C S LH + +K
Sbjct: 732 SALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGL 791
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
+ AL+ +Y KF I +AR +F G+A +DV W M+ A+ E EA+ F+E
Sbjct: 792 QWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSE 851
Query: 228 MLHHGAYQPNEFIFGSV------------FSACSNFARILF-NEIDSPDLASWNALIAGV 274
H ++P++ ++ +A LF + D D+ WN ++
Sbjct: 852 -FHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRF 910
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
A EA+ F +M + + DGLT +L G L G Q+H +++ G D V
Sbjct: 911 LQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVV 970
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V N ++ MY K + A VF ++ + D +SWN++I+ C E +F +L
Sbjct: 971 SVGNCLINMYVKAGSVSRARSVFGQMNE-VDLISWNTMISGCTLSGLEECSVGMFVHLLR 1029
Query: 395 SQIKPDHITFNDVMGACAKM-ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
+ PD T V+ AC+ + + TQ+H K G+ D FV L+D+Y K G +
Sbjct: 1030 DSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKME 1089
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
A LF + D+ SW++++ GY G +AL+L+ M+ G + +TLV A
Sbjct: 1090 EAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAG 1149
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
+ +++G ++ ++ G S V+D+ + G + A +++ D V W
Sbjct: 1150 GLVGLKQGKQIHAVVVKR-GFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDD-VAW 1207
Query: 574 KSLLA 578
++++
Sbjct: 1208 TTMIS 1212
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 137/556 (24%), Positives = 254/556 (45%), Gaps = 20/556 (3%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T A + C S +H + + Q DV + ++N+Y K G + +AR+ FD M
Sbjct: 762 TLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGM 821
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+VV W M+ E +A+ L+ + ++G P T ++ + ++ +
Sbjct: 822 AVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELK 881
Query: 157 QLHAHVIK----SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG------ 206
Q A+ K + GS +I N ++ + + +A + F + V G
Sbjct: 882 QFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVM 941
Query: 207 -SMIAAFS--KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPD 263
+++A + +LG ++ + L N I V + + AR +F +++ D
Sbjct: 942 LTVVAGLNCLELGKQIHGIV-MRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVD 1000
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG-RLTLYQGMQVH 322
L SWN +I+G ++ +F + LLPD TV S+L AC Y Q+H
Sbjct: 1001 LISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIH 1060
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ +K G + V A++ +Y+K + A +F D SWN+I+ +
Sbjct: 1061 ACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVN-QDGFDLASWNAIMHGYIVSGDF 1119
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
+ RL+ M S + D IT + A + L+ Q+H + K G D+FV +G+
Sbjct: 1120 PKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGV 1179
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y+KCG + SAR++F+ + +PD V+W+++I G + G + AL + +MR V P+
Sbjct: 1180 LDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDE 1239
Query: 503 VTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
T ++ ACS + +E+G ++ I++ P + +VD+ A+ G + +A
Sbjct: 1240 YTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFV--MTSLVDMYAKCGNIEDARGLF 1297
Query: 562 NQMACDADIVVWKSLL 577
+ I W +++
Sbjct: 1298 KRTNT-RRIASWNAMI 1312
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 220/467 (47%), Gaps = 42/467 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +++ + L L+LG+++H ++ S V + N ++NMY K GS+ AR F +M
Sbjct: 937 TFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQM 996
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL-GSVCLG 155
+ +++SW MI+GC+ + E ++ +++ +L+ ++P QFT S+++ACS L G L
Sbjct: 997 NEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLA 1056
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
Q+HA +K+ ALI +Y+K ++ +A +F D+ SW +++ +
Sbjct: 1057 TQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVS 1116
Query: 216 GYELEALCHFNEMLHHG----------------------------------AYQPNEFIF 241
G +AL + M G + + F+
Sbjct: 1117 GDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVT 1176
Query: 242 GSVFS---ACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
V C AR +F+EI SPD +W +I+G + A+ + +MR ++
Sbjct: 1177 SGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQ 1236
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD T +L+ AC L QG Q+H+ I+K+ + V +++ MYAKC + +A +
Sbjct: 1237 PDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGL 1296
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
FK + SWN++I QH A+E + F M + + PD +TF V+ AC+
Sbjct: 1297 FKRTNTRRIA-SWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGL 1355
Query: 417 L-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
+ E + G+ ++ + L+D + G + A K+ + M
Sbjct: 1356 VSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSM 1402
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 207/483 (42%), Gaps = 79/483 (16%)
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI--A 198
SI++ + LG++ HA ++ S H N LI MY K + AR +F
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720
Query: 199 RKDVTSWGSMIAAF------SKLGYEL-------------------------EALCHFNE 227
+D+ +W ++++A S G+ L A +E
Sbjct: 721 NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASE 780
Query: 228 MLHHGAY----QPNEFIFGSVFSACSNF-----ARILFNEIDSPDLASWNALIAGVASHS 278
LH A Q + F+ G++ + + F AR+LF+ + D+ WN ++
Sbjct: 781 SLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTC 840
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
EAM LFSE PD +T+ +L S V C
Sbjct: 841 LEYEAMLLFSEFHRTGFRPDDVTLRTL--------------------------SRVVKCK 874
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
+ + L ++ + G +D + WN ++ LQ +A E F M+ S++
Sbjct: 875 KNILELKQFKAYATKLFMYDDDG--SDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVA 932
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
D +TF ++ A + LE+ Q+H + ++GL V V N L+++Y+K GS+ AR +
Sbjct: 933 CDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSV 992
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
F M D++SW+++I G G + ++ +F + + P+ T+ VL ACS +
Sbjct: 993 FGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSS---L 1049
Query: 519 EEGLHLYRIMEN---EYGIIPTREHCSCVVDLLARAGCVHEAED-FINQMACDADIVVWK 574
E G +L + + G++ + ++D+ ++ G + EAE F+NQ D+ W
Sbjct: 1050 EGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGF--DLASWN 1107
Query: 575 SLL 577
+++
Sbjct: 1108 AIM 1110
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 173/586 (29%), Positives = 291/586 (49%), Gaps = 48/586 (8%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S ++ ++ ++L GR++H + DV + +++ Y K + +D R FD+
Sbjct: 94 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M +RNVV+WT +I+G ++N ++ + L+++M G P FTF + + + G G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
Q+H V+K+ + N+LI +Y K + AR +F K V +W SMI+ ++
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE----------------- 258
G +LEAL F M + +E F SV C+N + F E
Sbjct: 274 GLDLEALGMFYSM-RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 259 --------------IDS----------PDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+D+ ++ SW A+I+G + EA+ LFSEM+ +
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ P+ T +L A L + +VH+ ++K ++ + V A+L Y K + A
Sbjct: 393 VRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAA 448
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
VF + + D V+W++++A Q + E ++F + IKP+ TF+ ++ CA
Sbjct: 449 KVFSGI-DDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT 507
Query: 415 -ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
AS+ Q H + K+ L + V + L+ +Y K G++ SA ++F D+VSW+S+
Sbjct: 508 NASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSM 567
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I GYAQ G +AL +F M+ V + VT +GV AC+H GLVEEG + IM +
Sbjct: 568 ISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 627
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
I PT+EH SC+VDL +RAG + +A I M A +W+++LA+
Sbjct: 628 IAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAA 673
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/531 (25%), Positives = 253/531 (47%), Gaps = 56/531 (10%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FDK P R+ S+ +++ G S++ + +A +L++ + + G+ F S++K + L
Sbjct: 50 FDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDE 109
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
GRQLH IK + +L+ Y K D R VF + ++V +W ++I+ +
Sbjct: 110 LFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGY 169
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGS----------------------------- 243
++ E L F M + G QPN F F +
Sbjct: 170 ARNSMNDEVLTLFMRMQNEGT-QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 228
Query: 244 ---------VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
++ C N ARILF++ + + +WN++I+G A++ EA+ +F MR
Sbjct: 229 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 288
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ + S++ C L Q+H ++K GF + + A++ Y+KC+ + +
Sbjct: 289 NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLD 348
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
AL +FKE+G + VSW ++I+ LQ++ EE LFS M ++P+ T++ ++ A
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
++ +++H + KT V L+D Y+K G + A K+F+ +++ D+V+WS+
Sbjct: 409 VISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL-VEEGLHLYRIMENE 531
++ GYAQ G + A+K+F + G+ PN T +L C+ + +G +
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFH-----G 519
Query: 532 YGIIPTREHCSCV----VDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ I + CV + + A+ G + AE+ + + D+V W S+++
Sbjct: 520 FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMIS 569
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 208/444 (46%), Gaps = 57/444 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S L EAL + +S +R+ S++A +I C++L+ L+ ++H ++
Sbjct: 264 NSMISGYAANGLDLEALGMF-YSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVV 322
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP-QRNVVSWTAMIAGCSQNYQENDAI 121
D ++ ++ Y KC ++ DA F ++ NVVSWTAMI+G QN + +A+
Sbjct: 323 KYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAV 382
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
L+ +M + GV P +FT+ I+ A V ++HA V+K+ + AL+ Y
Sbjct: 383 DLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAY 438
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K ++ +A VFSGI KD+ +W +M+A +++ G A+ F E L G +PNEF F
Sbjct: 439 VKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE-LTKGGIKPNEFTF 497
Query: 242 GSVFSACS-----------------------------------------NFARILFNEID 260
S+ + C+ A +F
Sbjct: 498 SSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR 557
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
DL SWN++I+G A H A +A+ +F EM+ R++ DG+T + AC + +G +
Sbjct: 558 EKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEK 617
Query: 321 VHSYIIKMGFDSNVPVCNA-ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+++ + N+ ++ +Y++ L A+ V + + A S W +I+AAC H
Sbjct: 618 YFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVH 677
Query: 380 NQAEELFRLFSRMLASQI---KPD 400
+ E R+ A +I KP+
Sbjct: 678 KKTE-----LGRLAAEKIIAMKPE 696
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 171/356 (48%), Gaps = 18/356 (5%)
Query: 231 HGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+G Q + FG+V S+ A LF++ D S+ +L+ G + EA LF +
Sbjct: 25 NGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNI 84
Query: 291 R------DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
D + L V + LC L+ G Q+H IK GF +V V +++ Y
Sbjct: 85 HRLGMEMDCSIFSSVLKVSATLCD-----ELF-GRQLHCQCIKFGFLDDVSVGTSLVDTY 138
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
K S + VF E+ K + V+W ++I+ +++ +E+ LF RM +P+ TF
Sbjct: 139 MKGSNFKDGRKVFDEM-KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTF 197
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
+G A+ Q+H + K GL + V N L+++Y+KCG++ AR LF+ E
Sbjct: 198 AAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV 257
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE--EGL 522
VV+W+S+I GYA G EAL +F MR V + + V+ C+++ + E L
Sbjct: 258 KSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQL 317
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
H + +YG + + + ++ ++ + +A ++ C ++V W ++++
Sbjct: 318 HCSVV---KYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMIS 370
>gi|255583926|ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527557|gb|EEF29678.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 679
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 190/628 (30%), Positives = 315/628 (50%), Gaps = 78/628 (12%)
Query: 11 KQNLYNEALVAY-DFSQNNTNIRIRPSTYAG--LISACSSLRSLQLGRKVHDHILLSKCQ 67
+ NL+ EA+ Y D + + P +YA ++ A + L+ L LG+++H H++ +
Sbjct: 54 RSNLFREAISTYVDMILSG----VSPDSYAFPVVLKAVTGLQDLNLGKQIHAHVVKYGYE 109
Query: 68 PD-VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
V + N ++N YGKC L+D FD++ +R++VSW ++I+ + + A++ +
Sbjct: 110 SSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRF 169
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGS---VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
ML + P FT S + ACS L + LG+Q+H + ++ H S NAL+ MY
Sbjct: 170 MLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHWS-TFTNNALMTMYAN 228
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
R+ DA+ +F +++ SW +MI++FS+ +EAL M+ G +P+ S
Sbjct: 229 LGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGV-KPDGVTLAS 287
Query: 244 VFSACSNF-----------------------------------------ARILFNEIDSP 262
V ACS R +F+ I
Sbjct: 288 VLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDGILER 347
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRE-LLPDGLTVHSLLCACIGRLTLYQGMQV 321
WNA+IAG A + + +A+ LF EM L P+ T+ S++ A + + +
Sbjct: 348 KTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFSKESI 407
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS-----IIAAC 376
H Y+IK + + V NA++ MY++ + + +F + + D VSWN+ +I+ C
Sbjct: 408 HGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSM-EVRDIVSWNTMITGYVISGC 466
Query: 377 ----------LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
+QH A E + KP+ IT V+ CA +A+L ++H Y
Sbjct: 467 YNDALLMLHEMQH--ANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAY 524
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
+ LA +V V + L+D+Y KCG L +R++F+ M +V++W+ +++ Y G G+EA
Sbjct: 525 AVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGMHGNGEEA 584
Query: 487 LKLFTRMRSLG-----VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC 541
L+LF M + G V P VT++ +L ACSH G+V+EGL L+ M++++GI P +H
Sbjct: 585 LELFKDMVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEGLKLFHRMKDDHGIEPGPDHY 644
Query: 542 SCVVDLLARAGCVHEAEDFINQMACDAD 569
+CV DLL RAG V +A DFIN M D D
Sbjct: 645 ACVADLLGRAGKVEQAYDFINTMPSDFD 672
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 146/539 (27%), Positives = 252/539 (46%), Gaps = 66/539 (12%)
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
R+ SW + +++ +AI Y+ M+ SGV P + F ++KA +GL + LG+Q+
Sbjct: 40 RSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQI 99
Query: 159 HAHVIKSEHGSHLIA-QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
HAHV+K + S +A N+L+ Y K + D VF I +D+ SW S+I+AF +
Sbjct: 100 HAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQE 159
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------- 251
AL F ML +P+ F S ACSN
Sbjct: 160 WELALEAFRFMLAED-LEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHWSTFT 218
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A+ LF + +L SWN +I+ + + EA+ M +
Sbjct: 219 NNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGV 278
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNAL 354
PDG+T+ S+L AC L G ++H+Y ++ G N V +A++ MY C + +
Sbjct: 279 KPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGR 338
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA-SQIKPDHITFNDVMGACAK 413
VF + + + WN++IA Q+ E+ LF M+A + + P+ T ++ A A+
Sbjct: 339 RVFDGILERKTGL-WNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASAR 397
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
S +H Y+ K L D +V N LMD+Y + + ++ +F+ ME D+VSW+++
Sbjct: 398 CESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTM 457
Query: 474 ILGYAQFGCGDEALKLFTRMR--SLGVS-----------PNLVTLVGVLTACSHVGLVEE 520
I GY GC ++AL + M+ + G++ PN +TL+ VL C+ + + +
Sbjct: 458 ITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAK 517
Query: 521 G--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
G +H Y + + S +VD+ A+ GC++ + +QM +++ W ++
Sbjct: 518 GKEIHAYAVRN---ALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPI-KNVITWNVIV 572
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 109/228 (47%), Gaps = 11/228 (4%)
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
K + ++ SW + + N E + M+ S + PD F V+ A + L
Sbjct: 34 KPISQSRSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDL 93
Query: 418 EMVTQLHCYITKTGL-AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
+ Q+H ++ K G + V + N L++ Y KC L K+F+ + D+VSW+SLI
Sbjct: 94 NLGKQIHAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISA 153
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
+ + + AL+ F M + + P+ TLV + ACS++ EGL R+ + +G
Sbjct: 154 FCRAQEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNL-RKHEGL---RLGKQIHGYCF 209
Query: 537 TREHCSCVVD-----LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
H S + + A G + +A+ F+ ++ D +++ W ++++S
Sbjct: 210 RNGHWSTFTNNALMTMYANLGRLDDAK-FLFKLFEDRNLISWNTMISS 256
>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
Length = 772
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 167/557 (29%), Positives = 279/557 (50%), Gaps = 49/557 (8%)
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
V + + ++ MY +CG + DA F++M +R+VV+WTA+++GC +N + D ++ ++M++
Sbjct: 149 VAVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVR 208
Query: 130 ----SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
P T S ++AC L + GR LH + +K G + +AL +MY+K
Sbjct: 209 LAGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCH 268
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
DA ++F + KDV SW S+I + G EA+ F EM+ G QP++ + +
Sbjct: 269 STEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESG-LQPDDVLVSCLL 327
Query: 246 SACSNFARI----------------------------------------LFNEIDSPDLA 265
S N + +F + D
Sbjct: 328 SGLGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDAD 387
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDR---ELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
SWN +I G + + L+ EM+ R E L D ++ S + +C + L G H
Sbjct: 388 SWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAH 447
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
Y IK D + V N ++ MY +C +A +F D V+WN++I++ +
Sbjct: 448 CYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHS 507
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
L+ +ML + P+ T V+ ACA + +LE ++H Y+ + G +DV + L
Sbjct: 508 NTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTAL 567
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y KCG LG+AR++F+ M DVV+W+ +I GY G +AL+LF +M + PN
Sbjct: 568 IDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNG 627
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
VT + +L+AC H GL+EEG L+ M +Y + P +H +C+VDLL ++G + EAED +
Sbjct: 628 VTFLAILSACCHSGLLEEGRQLFTRM-GKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVL 686
Query: 563 QMACDADIVVWKSLLAS 579
M + D +W +LL++
Sbjct: 687 AMPVEPDGGIWGTLLSA 703
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 235/491 (47%), Gaps = 51/491 (10%)
Query: 32 RIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
+ RP+ T + AC L L GR +H + + ++ + + +MY KC S EDA
Sbjct: 214 KARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDA 273
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F ++P+++VVSWT++I +A++L+ +M++SG+ P ++
Sbjct: 274 CSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNS 333
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G+V G+ HA ++K G +++ NALI+MY KF+ + +A VF + ++D SW MI
Sbjct: 334 GNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMI 393
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQ----PNEFIFGSVFSACSNFARILFN-------- 257
+ K G +++ L + EM Y+ N + S S+CS +
Sbjct: 394 VGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLV--SAISSCSRLVELRLGRSAHCYSI 451
Query: 258 ----EIDSP-----------------------------DLASWNALIAGVASHSNANEAM 284
+ DS D+ +WN LI+ A ++N A+
Sbjct: 452 KHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAV 511
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
SL+ +M L P+ T+ +++ AC + L +G ++HSY+ +MG+D +V + A++ MY
Sbjct: 512 SLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMY 571
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
AKC L A +F + ++ D V+WN +I+ H +A++ LF +M IKP+ +TF
Sbjct: 572 AKCGQLGTARRIFDSMLQH-DVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTF 630
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME- 463
++ AC LE QL + K L ++ ++D+ K G L A + M
Sbjct: 631 LAILSACCHSGLLEEGRQLFTRMGKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPV 690
Query: 464 NPDVVSWSSLI 474
PD W +L+
Sbjct: 691 EPDGGIWGTLL 701
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 141/565 (24%), Positives = 253/565 (44%), Gaps = 60/565 (10%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG--CSQNYQENDAIKLY 124
+PD+V + +++ Y G A + F P+ + W ++I C+ ++ A+ +
Sbjct: 43 RPDIVAK--LVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCASDFVA--ALNAH 98
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK----SEHGSHLIAQNALIAM 180
+ML S P FT A + LG++ +G +HA+ ++ + G + ++L+ M
Sbjct: 99 RRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSVAVPSSLVYM 158
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH---HGAYQPN 237
Y + + DA +F + +DV +W ++++ + G + L + EM+ G +PN
Sbjct: 159 YARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAGDGKARPN 218
Query: 238 EFIFGSVFSACSNFARI----------------------------------------LFN 257
S AC + LF
Sbjct: 219 SRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLFP 278
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
E+ D+ SW +LI EAM LF EM + L PD + V LL ++
Sbjct: 279 ELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNSGNVHG 338
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G H+ I+K F NV V NA+++MY K ++ NA VF+ L + D+ SWN +I
Sbjct: 339 GKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQR-DADSWNLMIVGYC 397
Query: 378 QHN---QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
+ + EL+R + D + + +C+++ L + HCY K L
Sbjct: 398 KAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIKHWLDE 457
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
D V N L+ +Y +CG A K+F + DVV+W++LI YA G + A+ L+ +M
Sbjct: 458 DSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQM 517
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
+ G++PN TL+ V++AC+++ +E G ++ ++ E G + ++D+ A+ G
Sbjct: 518 LTEGLTPNSTTLITVISACANLVALERGEKIHSYVK-EMGWDYDVSINTALIDMYAKCGQ 576
Query: 554 VHEAEDFINQMACDADIVVWKSLLA 578
+ A + M D+V W +++
Sbjct: 577 LGTARRIFDSM-LQHDVVAWNVMIS 600
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 190/437 (43%), Gaps = 65/437 (14%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+S + ++ G+ H I+ +V++ N +++MYGK +++A F + QR+
Sbjct: 326 LLSGLGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRD 385
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQF-----------TFGSIIKACSGL 149
SW MI G + + ++LY +M QF + S I +CS L
Sbjct: 386 ADSWNLMIVGYCKAGCDVKCLELYREM--------QFRDTYEFLCDANSLVSAISSCSRL 437
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR--KDVTSWGS 207
+ LGR H + IK N LI MY + + A +F G+A+ DV +W +
Sbjct: 438 VELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIF-GLAKLKGDVVTWNT 496
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------- 251
+I++++ LG+ A+ +++ML G PN +V SAC+N
Sbjct: 497 LISSYAHLGHSNTAVSLYDQMLTEG-LTPNSTTLITVISACANLVALERGEKIHSYVKEM 555
Query: 252 ------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
AR +F+ + D+ +WN +I+G H A +A+ LF
Sbjct: 556 GWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELF 615
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
+M + P+G+T ++L AC L +G Q+ + + K + N+ ++ + K
Sbjct: 616 GKMEGGSIKPNGVTFLAILSACCHSGLLEEGRQLFTRMGKYSLEPNLKHYACMVDLLGKS 675
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD--HITFN 405
L A + + D W ++++AC H+ E R+ + AS + + +I +
Sbjct: 676 GHLQEAEDMVLAMPVEPDGGIWGTLLSACKLHDDFEMGLRIAKKAFASDAENEGYYILIS 735
Query: 406 DVMGACAKMASLEMVTQ 422
+ G+ K +E + +
Sbjct: 736 NSYGSAKKWDEIEKLRE 752
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 2/210 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +SS N A+ YD + +T +ISAC++L +L+ G K+H ++
Sbjct: 495 NTLISSYAHLGHSNTAVSLYD-QMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVK 553
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
DV + +++MY KCG L AR FD M Q +VV+W MI+G + + A++
Sbjct: 554 EMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALE 613
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ +M + P TF +I+ AC G + GRQL + K +L ++ +
Sbjct: 614 LFGKMEGGSIKPNGVTFLAILSACCHSGLLEEGRQLFTRMGKYSLEPNLKHYACMVDLLG 673
Query: 183 KFDRILDARN-VFSGIARKDVTSWGSMIAA 211
K + +A + V + D WG++++A
Sbjct: 674 KSGHLQEAEDMVLAMPVEPDGGIWGTLLSA 703
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 183/591 (30%), Positives = 295/591 (49%), Gaps = 50/591 (8%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHI----LLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+ Y L+ C+S +S+ +++H H LLS +L + + Y G AR
Sbjct: 19 ARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSS-LAAAYAMFGCAPHARK 77
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLG 150
FD++ ++ SW AMI + + DA+ L++QML SG P +T+ +IKAC
Sbjct: 78 LFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYL 137
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+G +HA + S S QN+L+AMY + AR VF + + + SW +MI
Sbjct: 138 LPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMIN 197
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------- 249
+ K G EAL F+ M+ G +P+ SV CS
Sbjct: 198 GYFKNGCVKEALMVFDWMIGKG-IEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLG 256
Query: 250 -------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ A+++F E+D D+ SW ++ G + +A A+ L M
Sbjct: 257 EDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMM 316
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ + P+ +T+ S+L AC +L G +H + I+ +S V V A++ MYAKC+ +
Sbjct: 317 QFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNV 376
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
+ VF + K + WN+II+ C+ + + + LF +ML + P+ T N ++ A
Sbjct: 377 NLSFRVFSKTSKQ-RTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPA 435
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM--ENPDVV 468
A + L+ +H Y+ ++G + V L+DIY KCGSL SA +FN + ++ D++
Sbjct: 436 YAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDII 495
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
+WS++I GY G G+ A+ LF +M GV PN +T +L ACSH GLV+EGL L++ M
Sbjct: 496 TWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFM 555
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + +H +CV+DLL RAG + EA + I MA + VW +LL S
Sbjct: 556 LEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGS 606
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 156/590 (26%), Positives = 264/590 (44%), Gaps = 80/590 (13%)
Query: 14 LYNEALVAYD----FSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQ 67
+Y + ++YD F Q + R P TY +I AC ++G +H ++S
Sbjct: 96 MYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFD 155
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
D +QN ++ MY CG +E AR FD M +R +VSW MI G +N +A+ ++ M
Sbjct: 156 SDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWM 215
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
+ G+ P T S++ CS L + +GR++HA V G + N+L+ MY K +
Sbjct: 216 IGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNM 275
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
+A+ +F + ++DV SW +M+ + G AL +M+ + +PN SV SA
Sbjct: 276 DEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALL-LCQMMQFESVKPNFVTLASVLSA 334
Query: 248 CS----------------------------------------NFARILFNEIDSPDLASW 267
C+ N + +F++ A W
Sbjct: 335 CASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPW 394
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
NA+I+G + + +A+ LF +M + P+ T++SLL A L Q +H Y+I+
Sbjct: 395 NAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIR 454
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL-GKNADSVSWNSIIAACLQHNQAEELF 386
GF S + V ++ +Y+KC L +A +F + K+ D ++W++IIA H E
Sbjct: 455 SGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAI 514
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG----- 441
LF +M+ S +KP+ ITF ++ AC+ H + GL F++
Sbjct: 515 SLFDQMVQSGVKPNEITFTSILHACS-----------HAGLVDEGLGLFKFMLEDNQMSL 563
Query: 442 -------LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI---LGYAQFGCGDEALKLF 490
++D+ + G L A +L M P+ W +L+ + + G+ A K
Sbjct: 564 RTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWL 623
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
+ G + N V L + +A VG + H+ R+M N G+ T H
Sbjct: 624 FELEP-GNTGNYVLLANIYSA---VGRWRDAEHV-RLMMNNIGLRKTPAH 668
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 199/429 (46%), Gaps = 55/429 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRP--STYAGLISACSSLRSLQLGRKVHDH 60
N ++ K EAL+ +D+ I P +T ++ CS L+ L++GR+VH
Sbjct: 193 NTMINGYFKNGCVKEALMVFDWMIGKG---IEPDCATVVSVLPVCSYLKELEVGRRVHAL 249
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ + D+ + N +L+MY KCG++++A+M F +M +R+VVSWT M+ G N A
Sbjct: 250 VEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSA 309
Query: 121 IKLYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
+ L QM+Q V P T S++ AC+ L S+ GR LH I+ + S +I + ALI
Sbjct: 310 L-LLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALID 368
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY K + + + VFS +++ W ++I+ G +A+ F +ML A PN+
Sbjct: 369 MYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLME-AVDPNDA 427
Query: 240 IFGS--------------------------------------VFSACSNF--ARILFNEI 259
S ++S C + A +FN I
Sbjct: 428 TLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGI 487
Query: 260 --DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
D+ +W+A+IAG H + A+SLF +M + P+ +T S+L AC + +
Sbjct: 488 PKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDE 547
Query: 318 GMQVHSYII---KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
G+ + +++ +M ++ C ++ + + L A + + + + W +++
Sbjct: 548 GLGLFKFMLEDNQMSLRTDHYTC--VIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLG 605
Query: 375 ACLQHNQAE 383
+C+ H E
Sbjct: 606 SCVIHENVE 614
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 149/292 (51%), Gaps = 9/292 (3%)
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT----MYAK 346
+ + LL SLL C R ++ Q+H++ I +G S+ P + +L+ YA
Sbjct: 10 KSKHLLTATARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSS-PYSHHLLSSLAAAYAM 68
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK-PDHITFN 405
+A +F EL +N SWN++I + + LF +MLAS + PD+ T+
Sbjct: 69 FGCAPHARKLFDEL-RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYP 127
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
V+ AC EM +H +G D FV N LM +Y+ CG + AR++F+ M
Sbjct: 128 FVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRER 187
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
+VSW+++I GY + GC EAL +F M G+ P+ T+V VL CS++ +E G ++
Sbjct: 188 TLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVH 247
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
++E + + + ++D+ A+ G + EA+ +M D+V W +++
Sbjct: 248 ALVEVK-NLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMD-KRDVVSWTTMM 297
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 177/543 (32%), Positives = 279/543 (51%), Gaps = 41/543 (7%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+S + SL ++H L+ + LQ H++ S++ AR D+ P
Sbjct: 2 LLSLLRTATSLTQIHQIHAQTLIH----GLPLQTHLIPKLIDLHSIDYARFVLDQTPSPT 57
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
SW ++I + + +++ LY++ML+S P FTF ++KACS LGSV G Q+H
Sbjct: 58 DFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHT 117
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
HV++ GS L N+LI MY K R+ ARN + + +D SW S+I+ + + G ++E
Sbjct: 118 HVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWG-QVE 176
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEID-SPDLASWNALIAGVASHSN 279
AR LF E+ ++ W A+I G +
Sbjct: 177 K------------------------------ARDLFEEMPMRRNVVCWTAMINGYGKEGD 206
Query: 280 ANEAMSLFSEM--RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
E +SLF +M E+ P+ T+ LL AC G + +I N +
Sbjct: 207 FVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILV 266
Query: 338 NAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
A++ MY+KC + A +F + KN S WN+II C+Q EE L+ M A
Sbjct: 267 TALIDMYSKCGDVEKAWRIFDGVSCKNLPS--WNAIITGCVQGGLLEEAIDLYRHMKAQS 324
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
+KP+ IT +V+ ACA + +LE+ ++H Y+ + GL +V + L+D+Y KCG + A
Sbjct: 325 VKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDAC 384
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
+F DV W+++ILG A G G ++L +F++M GV PN VT +GVL+AC+H G
Sbjct: 385 LIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSG 444
Query: 517 LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
LVEEG + M +++G+ P EH +C+VDLL RAG + EA + + M D ++W +L
Sbjct: 445 LVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGAL 504
Query: 577 LAS 579
L++
Sbjct: 505 LSA 507
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 177/352 (50%), Gaps = 24/352 (6%)
Query: 4 DYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILL 63
D+V L +L+ + LV+ D Q N +T L+SACS+L + ++GR + I +
Sbjct: 206 DFVEML---SLFRQMLVSADEVQPNA------ATMVCLLSACSTLCNYEVGRFLSVFIDV 256
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
+K + +L +++MY KCG +E A FD + +N+ SW A+I GC Q +AI L
Sbjct: 257 NKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDL 316
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
Y M V P + T +++ AC+GLG++ LGR++H ++ ++ ++I AL+ MY K
Sbjct: 317 YRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAK 376
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
+I DA +F + KDV W +MI + G ++L F++M+ G QPN+ F
Sbjct: 377 CGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGV-QPNDVTFIG 435
Query: 244 VFSACSNF-----ARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
V SAC++ R+ F+ + SP L + ++ + + EA L M
Sbjct: 436 VLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNML-- 493
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
+ PD + +LL AC L ++ S I D N+ C + +YA
Sbjct: 494 -IPPDSIIWGALLSACRIHRNLELADKI-SETIMASQDPNIGFCILLSNIYA 543
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 194/440 (44%), Gaps = 78/440 (17%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC-------- 83
+PS T+ ++ ACS+L S+ G ++H H+L D+ + N +++MY KC
Sbjct: 90 KPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARN 149
Query: 84 -----------------------GSLEDARMGFDKMP-QRNVVSWTAMIAGCSQNYQEND 119
G +E AR F++MP +RNVV WTAMI G + +
Sbjct: 150 FWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVE 209
Query: 120 AIKLYIQMLQSG--VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
+ L+ QML S V P T ++ ACS L + +GR L + ++ + I AL
Sbjct: 210 MLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTAL 269
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
I MY+K + A +F G++ K++ SW ++I + G EA+ + M + +PN
Sbjct: 270 IDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQ-SVKPN 328
Query: 238 EFIFGSVFSACSNF----------------------------------------ARILFN 257
E +V SAC+ A ++F
Sbjct: 329 EITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFV 388
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
+ D+A WNA+I G+A H + +++++FS+M + P+ +T +L AC + +
Sbjct: 389 KTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEE 448
Query: 318 G-MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
G +Q S K G + ++ + + L A + + + DS+ W ++++AC
Sbjct: 449 GRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSAC 508
Query: 377 LQHNQAEELFRLFSRMLASQ 396
H E ++ ++ASQ
Sbjct: 509 RIHRNLELADKISETIMASQ 528
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 189/605 (31%), Positives = 297/605 (49%), Gaps = 43/605 (7%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
++ AL+ Y F +N+ T+ +I AC L ++ L VH+ D+ + +
Sbjct: 126 FDFALLFY-FKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGS 184
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
++ +Y G + DAR FD++PQR+ + W M+ G ++ N+A+ + M S M
Sbjct: 185 ALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMV 244
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
T+ I+ C+ G CLG Q+H VI S N L+AMY+K + DAR +F
Sbjct: 245 NSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLF 304
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA------- 247
+ + + D +W +IA + + G+ EA FN M+ G +P+ F S +
Sbjct: 305 NTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGV-KPDSVTFASFLPSILESGSL 363
Query: 248 --CSN-------------------------------FARILFNEIDSPDLASWNALIAGV 274
C AR +F + D+A A+I+G
Sbjct: 364 RHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGY 423
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
H +A++ F + ++P+ LT+ S+L AC L G ++H I+K ++ V
Sbjct: 424 VLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIV 483
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V +AI MYAKC L A F+ + + DS+ WNS+I++ Q+ + E LF +M
Sbjct: 484 NVGSAITDMYAKCGRLDLAYEFFRRMSE-TDSICWNSMISSFSQNGKPEMAVDLFRQMGM 542
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
S K D ++ + + + A + +L ++H Y+ + + D FV + L+D+Y KCG L
Sbjct: 543 SGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLAL 602
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
AR +FN M + VSW+S+I Y GC E L LF M GV P+ VT + +++AC H
Sbjct: 603 ARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGH 662
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
GLV EG+H + M EYGI EH +C+VDL RAG +HEA D I M D VW
Sbjct: 663 AGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWG 722
Query: 575 SLLAS 579
+LL +
Sbjct: 723 TLLGA 727
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 219/484 (45%), Gaps = 54/484 (11%)
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
S+ +ACS V RQ+H +I + ++ +Y RI D N+F G+
Sbjct: 49 SLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELC 108
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------- 251
+ W MI LG+ AL + +ML P+++ F V AC
Sbjct: 109 NALPWNWMIRGLYMLGWFDFALLFYFKMLGSNV-SPDKYTFPYVIKACGGLNNVPLCMVV 167
Query: 252 -------------------------------ARILFNEIDSPDLASWNALIAGVASHSNA 280
AR +F+E+ D WN ++ G +
Sbjct: 168 HNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDF 227
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
N AM F MR + + +T +L C R G QVH +I GF+ + V N +
Sbjct: 228 NNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTL 287
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+ MY+KC L +A +F + D+V+WN +IA +Q+ +E LF+ M+++ +KPD
Sbjct: 288 VAMYSKCGNLFDARKLFNTM-PQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPD 346
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
+TF + + + SL ++H YI + + FDV++ + L+DIY K G + ARK+F
Sbjct: 347 SVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQ 406
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
DV +++I GY G +A+ F + G+ PN +T+ VL AC+ + ++
Sbjct: 407 QNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKL 466
Query: 521 GLHLY-----RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
G L+ + +EN + S + D+ A+ G + A +F +M+ + D + W S
Sbjct: 467 GKELHCDILKKQLENIVNV------GSAITDMYAKCGRLDLAYEFFRRMS-ETDSICWNS 519
Query: 576 LLAS 579
+++S
Sbjct: 520 MISS 523
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 187/403 (46%), Gaps = 43/403 (10%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++P T+A + + SL+ ++VH +I+ + DV L++ ++++Y K G +E AR
Sbjct: 343 VKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMAR 402
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F + +V TAMI+G + DAI + ++Q G++P T S++ AC+ L
Sbjct: 403 KIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALA 462
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ LG++LH ++K + + + +A+ MY K R+ A F ++ D W SMI+
Sbjct: 463 ALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMIS 522
Query: 211 AFSKLGYELEALCHFNEM------------------------LHHG----------AYQP 236
+FS+ G A+ F +M L++G A+
Sbjct: 523 SFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSS 582
Query: 237 NEFIFGSV---FSACSNFA--RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
+ F+ ++ +S C A R +FN + + SWN++IA +H A E + LF EM
Sbjct: 583 DTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEML 642
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ PD +T ++ AC + +G+ H + G + + ++ +Y + L
Sbjct: 643 RAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRL 702
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
A K + D+ W +++ AC H EL +L SR L
Sbjct: 703 HEAFDAIKSMPFTPDAGVWGTLLGACRLHGNV-ELAKLASRHL 744
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 3/277 (1%)
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
+ SL AC + Q QVH+ II G + + +L +Y C + + +F L
Sbjct: 47 LESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGL- 105
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
+ +++ WN +I + + +ML S + PD TF V+ AC + ++ +
Sbjct: 106 ELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCM 165
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
+H G D+FV + L+ +Y G + AR++F+ + D + W+ ++ GY + G
Sbjct: 166 VVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSG 225
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC 541
+ A+ F MR+ N VT +L+ C+ G G ++ ++ G +
Sbjct: 226 DFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGS-GFEFDPQVA 284
Query: 542 SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +V + ++ G + +A N M D V W L+A
Sbjct: 285 NTLVAMYSKCGNLFDARKLFNTMP-QTDTVTWNGLIA 320
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 172/544 (31%), Positives = 275/544 (50%), Gaps = 40/544 (7%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNM--YGKCGSLEDARMGFDKMPQ 98
L+S C +L++L +++H I+ + + ++ G L A F +
Sbjct: 34 LLSNCKTLQTL---KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRN 90
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
N V W MI G S + A++ Y+ M+ SG P ++TF SI K+C+ + G+Q+
Sbjct: 91 PNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQV 150
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
HAHV+K + +LI MY + +++AR VF + +D S+ ++I ++ G+
Sbjct: 151 HAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFL 210
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHS 278
EA R LF+EI D+ SWNA+I+G A
Sbjct: 211 DEA-------------------------------RELFDEIPVRDVVSWNAMISGYAQSG 239
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVC 337
EAM+ F EMR ++ P+ T+ S+L AC + Q G V S+I G SN+ +
Sbjct: 240 RVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLV 299
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
N ++ MY KC L A +F+++ ++ + VSWN +I + +E LF RM+ S I
Sbjct: 300 NGLIDMYVKCGDLEEASNLFEKI-QDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNI 358
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKT--GLAFDVFVMNGLMDIYIKCGSLGSA 455
P+ +TF ++ ACA + +L++ +H Y+ K + V + L+D+Y KCG L A
Sbjct: 359 DPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVA 418
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
+++F+ M + +W+++I G+A G D AL LF+RM S G P+ +T VGVLTAC H
Sbjct: 419 KRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHA 478
Query: 516 GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
GL+ G + M +Y + P H C++DL RAG EAE + M D +W S
Sbjct: 479 GLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCS 538
Query: 576 LLAS 579
LL +
Sbjct: 539 LLGA 542
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 185/422 (43%), Gaps = 76/422 (18%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK- 95
T+ + +C+ +R G++VH H+L + + + ++NMY + G L +AR+ FDK
Sbjct: 130 TFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKS 189
Query: 96 ------------------------------MPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+P R+VVSW AMI+G +Q+ + +A+ +
Sbjct: 190 SMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFE 249
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGS-VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
+M ++ V P T S++ AC+ GS + LG + + + GS++ N LI MY K
Sbjct: 250 EMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKC 309
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ +A N+F I K+V SW MI ++ + EAL F M+ PN+ F S+
Sbjct: 310 GDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSN-IDPNDVTFLSI 368
Query: 245 FSACSNF------------------------------------------ARILFNEIDSP 262
AC+N A+ +F+ +++
Sbjct: 369 LPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTK 428
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
LA+WNA+I+G A H + + A+ LFS M +PD +T +L AC L G +
Sbjct: 429 SLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYF 488
Query: 323 SYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
S +I+ +P ++ ++ + + A + K + D W S++ AC H +
Sbjct: 489 SSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRR 548
Query: 382 AE 383
E
Sbjct: 549 IE 550
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 161/322 (50%), Gaps = 22/322 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRP--STYAGLISACS-SLRSLQLGRKVHD 59
N +S + EA+ F + ++ P ST ++SAC+ S SLQLG V
Sbjct: 229 NAMISGYAQSGRVEEAMA---FFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRS 285
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
I ++ L N +++MY KCG LE+A F+K+ +NVVSW MI G + +
Sbjct: 286 WIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKE 345
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG--SHLIAQNAL 177
A+ L+ +M+QS + P TF SI+ AC+ LG++ LG+ +HA+V K+ + + +L
Sbjct: 346 ALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSL 405
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
I MY K + A+ +F + K + +W +MI+ F+ G+ AL F+ M G + P+
Sbjct: 406 IDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEG-FVPD 464
Query: 238 EFIFGSVFSACSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
+ F V +AC + F+ ++ + SP L + +I +EA +L
Sbjct: 465 DITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLV 524
Query: 288 SEMRDRELLPDGLTVHSLLCAC 309
M E+ PDG SLL AC
Sbjct: 525 KNM---EMKPDGAIWCSLLGAC 543
>gi|302768433|ref|XP_002967636.1| hypothetical protein SELMODRAFT_88474 [Selaginella moellendorffii]
gi|300164374|gb|EFJ30983.1| hypothetical protein SELMODRAFT_88474 [Selaginella moellendorffii]
Length = 747
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 192/617 (31%), Positives = 306/617 (49%), Gaps = 47/617 (7%)
Query: 5 YVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLS 64
++++L + EAL + + ++ + + +I AC R GRKVH +L
Sbjct: 84 FIAALAQNGHCKEALATFK-KMDLEGVKPKRLAFLRVIGACCDARDATEGRKVHARVLED 142
Query: 65 KC-QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
DV L ++NMYGKCG L+ A M F + ++ SWT+MI ++ + + A+++
Sbjct: 143 AVLASDVFLSAALINMYGKCGCLDKAEMVFGSIASKDDFSWTSMIRAYVEHEEFDLALEI 202
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCL--GRQLHAHVIKSEHGSHLIAQNALIAMY 181
Y++ L G P TF +I++AC+ L L GR +H+ +++S GS+L N L+ +Y
Sbjct: 203 YMEFLVEGGKPDASTFKNILRACTRLEEKSLPQGRLVHSQILESGLGSNLALVNRLVYLY 262
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
+A ++ + + W +M+AA S+ G +AL FN G +P+ F
Sbjct: 263 GSSGCFEEAMDLLDRMNPPEDVPWNAMVAALSQRGKNRQALELFNRTSLEGV-KPSGVTF 321
Query: 242 GSVFSACSN----------FARILFNEIDSPDLAS------------------------W 267
S ACS+ AR L S ++ + W
Sbjct: 322 VSGIDACSDGGDEQQGRAIHARALEAGFGSDEVVTGCLINMYGKCGNLEQARRMLEASGW 381
Query: 268 N------ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
N +LI H A+ +F + + + +T+ S++ A L +G +
Sbjct: 382 NNLVSCTSLIWAYCQHGLLENALDVFHRVEQGGIKANKVTLVSVVAAFWSSDFLDRGRAM 441
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H+ +I++G S+V V NA++ MY KC L +A ++F + ++VSWNSII AC Q
Sbjct: 442 HARLIELGHSSDVIVTNALIGMYGKCGSLPDAKMIFAN-ARRKNAVSWNSIIGACSQQGD 500
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+ LF+RM S P IT +V+ AC ++ L +H I + L D V +
Sbjct: 501 GKSALDLFARMDLSGSSPTTITLANVLEACVRINDLPRGKVIHLEIRGSMLEHDPNVRSS 560
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+++Y KCGSL A K+F ++ VV+W+S+I YA+ +++LKL RM GV N
Sbjct: 561 LLNMYTKCGSLVDAEKIFQRWQSSCVVTWTSMIAAYAKHARFEDSLKLGRRMEMEGVKFN 620
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
VT + V+ ACSH G VE+G H + M E G+ P+ E SCVVDLLARAG + +A DFI
Sbjct: 621 EVTFLTVIFACSHAGFVEQGCHYFVSMTRERGMTPSLEQYSCVVDLLARAGWIEQALDFI 680
Query: 562 N-QMACDADIVVWKSLL 577
+M + W +LL
Sbjct: 681 ERRMHLPPNAATWIALL 697
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 170/594 (28%), Positives = 274/594 (46%), Gaps = 64/594 (10%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S +A + C+ + G+ +H I+ + + NH+L MYG+ GS+E+A+ F+K
Sbjct: 16 SAFASALKNCTEVSE---GKHIHSQIVSAGLDRSTYVGNHVLEMYGRLGSVEEAQEAFEK 72
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ ++N +SWT IA +QN +A+ + +M GV P + F +I AC G
Sbjct: 73 VFEKNHISWTLFIAALAQNGHCKEALATFKKMDLEGVKPKRLAFLRVIGACCDARDATEG 132
Query: 156 RQLHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
R++HA V++ S + ALI MY K + A VF IA KD SW SMI A+ +
Sbjct: 133 RKVHARVLEDAVLASDVFLSAALINMYGKCGCLDKAEMVFGSIASKDDFSWTSMIRAYVE 192
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC------------------------SN 250
AL + E L G +P+ F ++ AC SN
Sbjct: 193 HEEFDLALEIYMEFLVEGG-KPDASTFKNILRACTRLEEKSLPQGRLVHSQILESGLGSN 251
Query: 251 FARI------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
A + L + ++ P+ WNA++A ++ +A+ LF+
Sbjct: 252 LALVNRLVYLYGSSGCFEEAMDLLDRMNPPEDVPWNAMVAALSQRGKNRQALELFNRTSL 311
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ P G+T S + AC QG +H+ ++ GF S+ V ++ MY KC L
Sbjct: 312 EGVKPSGVTFVSGIDACSDGGDEQQGRAIHARALEAGFGSDEVVTGCLINMYGKCGNLEQ 371
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A + + G N + VS S+I A QH E +F R+ IK + +T V+ A
Sbjct: 372 ARRMLEASGWN-NLVSCTSLIWAYCQHGLLENALDVFHRVEQGGIKANKVTLVSVVAAFW 430
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
L+ +H + + G + DV V N L+ +Y KCGSL A+ +F + VSW+S
Sbjct: 431 SSDFLDRGRAMHARLIELGHSSDVIVTNALIGMYGKCGSLPDAKMIFANARRKNAVSWNS 490
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLY---RI 527
+I +Q G G AL LF RM G SP +TL VL AC + + G +HL +
Sbjct: 491 IIGACSQQGDGKSALDLFARMDLSGSSPTTITLANVLEACVRINDLPRGKVIHLEIRGSM 550
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN--QMACDADIVVWKSLLAS 579
+E++ + S ++++ + G + +AE Q +C +V W S++A+
Sbjct: 551 LEHDPNVR------SSLLNMYTKCGSLVDAEKIFQRWQSSC---VVTWTSMIAA 595
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 155/331 (46%), Gaps = 18/331 (5%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
C+ L AL + + I+ T +++A S L GR +H ++ D
Sbjct: 395 CQHGLLENALDVFHRVEQG-GIKANKVTLVSVVAAFWSSDFLDRGRAMHARLIELGHSSD 453
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
V++ N ++ MYGKCGSL DA+M F ++N VSW ++I CSQ A+ L+ +M
Sbjct: 454 VIVTNALIGMYGKCGSLPDAKMIFANARRKNAVSWNSIIGACSQQGDGKSALDLFARMDL 513
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS--EHGSHLIAQNALIAMYTKFDRI 187
SG P T ++++AC + + G+ +H + S EH ++ +++L+ MYTK +
Sbjct: 514 SGSSPTTITLANVLEACVRINDLPRGKVIHLEIRGSMLEHDPNV--RSSLLNMYTKCGSL 571
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
+DA +F V +W SMIAA++K ++L M G + NE F +V A
Sbjct: 572 VDAEKIFQRWQSSCVVTWTSMIAAYAKHARFEDSLKLGRRMEMEGV-KFNEVTFLTVIFA 630
Query: 248 CSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
CS+ F + +P L ++ ++ +A +A+ R L P
Sbjct: 631 CSHAGFVEQGCHYFVSMTRERGMTPSLEQYSCVVDLLARAGWIEQALDFIE--RRMHLPP 688
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
+ T +LL AC L + + V II++
Sbjct: 689 NAATWIALLNACKIHHDLQRAVMVAERIIEL 719
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 174/548 (31%), Positives = 289/548 (52%), Gaps = 23/548 (4%)
Query: 54 GRKVHDHILLSKC--QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGC 111
GR VH H++ + D+ N +LNMYGK G L AR FD+MP+RN+VS+ ++
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137
Query: 112 SQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL 171
+Q A L+ ++ G QF +++K + + L +H+ K H +
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK-----------LGYELE 220
+ LI Y+ + DA +VF+GI RKD W +M++ +S+ L
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRCAQSCSLL 257
Query: 221 ALCHFNEMLHHGAYQP----NEFIFGSV---FSACSNF--ARILFNEIDSPDLASWNALI 271
A+ + +H A + + G++ ++ C + AR+ F I D+ + +I
Sbjct: 258 AISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMI 317
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
+ A + +A LF + +LP+ ++ S+L AC + L G Q+H++ IK+G +
Sbjct: 318 SRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHE 377
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
S++ V NA++ YAKC+ + ++L +F L ++A+ VSWN+I+ Q EE +F
Sbjct: 378 SDLFVGNALMDFYAKCNDMDSSLKIFSSL-RDANEVSWNTIVVGFSQSGLGEEALSVFCE 436
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M A+Q+ +T++ V+ ACA AS+ Q+HC I K+ D + N L+D Y KCG
Sbjct: 437 MQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGY 496
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+ A K+F + D++SW+++I GYA G +AL+LF RM V N +T V +L+
Sbjct: 497 IRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSV 556
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
C GLV GL L+ M ++GI P+ EH +C+V LL RAG +++A FI + +
Sbjct: 557 CCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAM 616
Query: 572 VWKSLLAS 579
VW++LL+S
Sbjct: 617 VWRALLSS 624
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 185/400 (46%), Gaps = 47/400 (11%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
+L+MY KCG ++DAR+ F+ +P +V+ + MI+ +Q+ Q A +L++++++S V+P
Sbjct: 285 LLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPN 344
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
+++ S+++AC+ + + G+Q+H H IK H S L NAL+ Y K + + + +FS
Sbjct: 345 EYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFS 404
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP-NEFIFGSVFSACSNFARI 254
+ + SW +++ FS+ G EAL F EM A P + + SV AC++ A I
Sbjct: 405 SLRDANEVSWNTIVVGFSQSGLGEEALSVFCEM--QAAQMPCTQVTYSSVLRACASTASI 462
Query: 255 ----------------------------------------LFNEIDSPDLASWNALIAGV 274
+F + D+ SWNA+I+G
Sbjct: 463 RHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGY 522
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSN 333
A H A +A+ LF M + + +T +LL C + G+ + S I G +
Sbjct: 523 ALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPS 582
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
+ I+ + + L +AL ++ ++ W +++++C+ H FS
Sbjct: 583 MEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVA--LGRFSAEK 640
Query: 394 ASQIKP-DHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
+I+P D T+ + A SL+ V L + G+
Sbjct: 641 ILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGV 680
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 143/291 (49%), Gaps = 18/291 (6%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ P+ Y+ ++ AC+++ L G+++H+H + + D+ + N +++ Y KC ++ +
Sbjct: 341 VLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSL 400
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP-GQFTFGSIIKACSGL 149
F + N VSW ++ G SQ+ +A+ ++ +M Q+ MP Q T+ S+++AC+
Sbjct: 401 KIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEM-QAAQMPCTQVTYSSVLRACAST 459
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
S+ Q+H + KS + + N+LI Y K I DA VF + +D+ SW ++I
Sbjct: 460 ASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAII 519
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFN--EID-- 260
+ ++ G +AL F+ M + + N+ F ++ S C N LF+ ID
Sbjct: 520 SGYALHGQAADALELFDRM-NKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHG 578
Query: 261 -SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
P + + ++ + N+A+ ++ P + +LL +CI
Sbjct: 579 IKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPS---APSAMVWRALLSSCI 626
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 8/210 (3%)
Query: 286 LFSEMRDRELLPDGLTVHSLLCA-----CIGRLTLYQGMQVHSYIIKMGFDSNVPV--CN 338
L E+ +LP V S CA CI R G VH ++++ G + + N
Sbjct: 41 LEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCAN 100
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
+L MY K L +A +F + + + VS+ +++ A Q E LF R+ +
Sbjct: 101 VLLNMYGKLGPLASARRLFDRMPER-NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE 159
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
+ ++ M + + +H K G + FV +GL+D Y C + A +
Sbjct: 160 VNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHV 219
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALK 488
FN + D V W++++ Y++ C + A +
Sbjct: 220 FNGIVRKDAVVWTAMVSCYSENDCPENAFR 249
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 187/610 (30%), Positives = 299/610 (49%), Gaps = 47/610 (7%)
Query: 9 LCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQP 68
LC EA+ + S + + + L+ C R+ + G KV+ L S
Sbjct: 69 LCANGKLEEAMKLLN-SMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSL 127
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
V L N L M+ + G+L DA F KM +RN+ SW ++ G ++ ++AI LY +ML
Sbjct: 128 SVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRML 187
Query: 129 Q-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
GV P +TF +++ C G+ + GR++H HV++ + + NALI MY K +
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
AR +F + R+D+ SW +MI+ + + G E L F M + P+ SV SA
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAM-RGLSVDPDLMTLTSVISA 306
Query: 248 CS----------------------------------------NFARILFNEIDSPDLASW 267
C A LF+ +D D+ SW
Sbjct: 307 CELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSW 366
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
+I+G + +A+ + M + PD +TV ++L AC L G+++H IK
Sbjct: 367 TTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIK 426
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
S V V N ++ MY+KC + AL +F + + + +SW SIIA +N+ E
Sbjct: 427 ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIAGLRLNNRCFEAL- 484
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
+F R + ++P+ IT + ACA++ +L ++H ++ +TG+ D F+ N L+D+Y+
Sbjct: 485 IFFRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYV 544
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
+CG + A FN + DV SW+ L+ GY++ G G ++LF RM V P+ +T +
Sbjct: 545 RCGRMNIAWNQFN-SQKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFIS 603
Query: 508 VLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
+L C +V +GL + ME EYG+ P +H +CVVDLL RAG + EA FI +M
Sbjct: 604 LLCGCGKSQMVRQGLMYFSKME-EYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVT 662
Query: 568 ADIVVWKSLL 577
D VW +LL
Sbjct: 663 PDPAVWGALL 672
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 140/516 (27%), Positives = 243/516 (47%), Gaps = 51/516 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N V KQ ++EA+ Y ++ T+ ++ C + L GR+VH H++
Sbjct: 164 NVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVV 223
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D+ + N ++ MY KCG ++ AR+ FD+MP+R+++SW AMI+G +N ++ +K
Sbjct: 224 RYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLK 283
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ M V P T S+I AC LG LGR +HA+VI + + N+L MY
Sbjct: 284 LFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYL 343
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
+A +FS + KD+ SW +MI+ + + + E M+ + +P+E
Sbjct: 344 YAGSWREAEKLFSRMDCKDIVSWTTMISGY-EYNFLPEKAIDTYRMMDQDSVKPDEITVA 402
Query: 243 SVFSACSNF---------------ARI-------------------------LFNEIDSP 262
+V SAC+ AR+ +F+ I
Sbjct: 403 AVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK 462
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
++ SW ++IAG+ ++ EA+ F +M+ L P+ +T+ + L AC L G ++H
Sbjct: 463 NVISWTSIIAGLRLNNRCFEALIFFRQMK-MTLQPNAITLTAALAACARIGALMCGKEIH 521
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+++++ G + + NA+L MY +C + A F K D SWN ++ + Q
Sbjct: 522 AHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQKK--DVSSWNILLTGYSERGQG 579
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT---GLAFDVFVM 439
+ LF RM+ ++++PD ITF ++ C K +MV Q Y +K G+ ++
Sbjct: 580 SVVVELFDRMVKARVRPDEITFISLLCGCGKS---QMVRQGLMYFSKMEEYGVTPNLKHY 636
Query: 440 NGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + G L A K M PD W +L+
Sbjct: 637 ACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALL 672
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 202/434 (46%), Gaps = 46/434 (10%)
Query: 110 GCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGS 169
G N + +A+KL M + V + F ++++ C + G ++++ + S +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSL 127
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
+ NA +AM+ +F ++DA VF ++ +++ SW ++ ++K GY EA+C ++ ML
Sbjct: 128 SVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRML 187
Query: 230 HHGAYQPNEFIFGSVFSACSNF-------------------------------------- 251
G +P+ + F V C
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 252 --ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
AR+LF+ + D+ SWNA+I+G + +E + LF MR + PD +T+ S++ AC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISAC 307
Query: 310 --IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
+G L G +H+Y+I GF ++ VCN++ MY A +F + D V
Sbjct: 308 ELLGDRRL--GRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRM-DCKDIV 364
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
SW ++I+ + E+ + M +KPD IT V+ ACA + L+ +LH
Sbjct: 365 SWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K L V V N L+++Y KC + A +F+ + +V+SW+S+I G EAL
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484
Query: 488 KLFTRMRSLGVSPN 501
F +M+ + + PN
Sbjct: 485 IFFRQMK-MTLQPN 497
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 176/332 (53%), Gaps = 12/332 (3%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACI 310
A +F ++ +L SWN L+ G A +EA+ L+ M + PD T +L C
Sbjct: 148 AWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCG 207
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
G L +G +VH ++++ G++ ++ V NA++TMY KC + +A L+F + + D +SWN
Sbjct: 208 GIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRR-DIISWN 266
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
++I+ ++ E +LF M + PD +T V+ AC + + +H Y+ T
Sbjct: 267 AMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITT 326
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
G A D+ V N L +Y+ GS A KLF+ M+ D+VSW+++I GY ++A+ +
Sbjct: 327 GFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTY 386
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN----EYGIIPTREHCSCVVD 546
M V P+ +T+ VL+AC+ +G ++ G+ L+++ Y I+ +++
Sbjct: 387 RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN-----LIN 441
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++ C+ +A D + + +++ W S++A
Sbjct: 442 MYSKCKCIDKALDIFHNIP-RKNVISWTSIIA 472
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 189/432 (43%), Gaps = 49/432 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + + +E L + F+ ++ T +ISAC L +LGR +H +++
Sbjct: 266 NAMISGYFENGMGHEGLKLF-FAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVI 324
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D+ + N + MY GS +A F +M +++VSWT MI+G N+ AI
Sbjct: 325 TTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAID 384
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
Y M Q V P + T +++ AC+ LG + G +LH IK+ S++I N LI MY+
Sbjct: 385 TYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYS 444
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN----- 237
K I A ++F I RK+V SW S+IA EAL F +M QPN
Sbjct: 445 KCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQM--KMTLQPNAITLT 502
Query: 238 ------------------------------EFIFGSVFSACSNFAR--ILFNEIDS--PD 263
+F+ ++ R I +N+ +S D
Sbjct: 503 AALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQKKD 562
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
++SWN L+ G + + + LF M + PD +T SLLC C + QG+ S
Sbjct: 563 VSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFS 622
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC-LQHN-- 380
+ + G N+ ++ + + L A +++ D W +++ AC + HN
Sbjct: 623 KMEEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNID 682
Query: 381 ----QAEELFRL 388
A+ +F L
Sbjct: 683 LGELSAQRIFEL 694
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 98/203 (48%), Gaps = 7/203 (3%)
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+ + EE +L + M ++ D F ++ C + E ++++ + + V +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVEL 131
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL-G 497
N + ++++ G+L A +F M ++ SW+ L+ GYA+ G DEA+ L+ RM + G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGG 191
Query: 498 VSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
V P++ T VL C + + G +H++ + YG + + ++ + + G V
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGREVHVHVV---RYGYELDIDVVNALITMYVKCGDVK 248
Query: 556 EAEDFINQMACDADIVVWKSLLA 578
A ++M DI+ W ++++
Sbjct: 249 SARLLFDRMP-RRDIISWNAMIS 270
>gi|302771700|ref|XP_002969268.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
gi|300162744|gb|EFJ29356.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
Length = 849
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 184/587 (31%), Positives = 302/587 (51%), Gaps = 60/587 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +++ACSS R +L V+ +++ ++ + D ++ N +NM+ KCG L+ AR F +M
Sbjct: 229 TFLAVLAACSSARDAEL---VYGNVVEAEWESDTMVANASINMFSKCGCLDRARDVFHRM 285
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ +V SW AM+A +Q+ ++A++L+ +M S V + T + C+ S+ G+
Sbjct: 286 KRWDVKSWNAMVAALAQHGFSSEALELFRRM-PSEVAVDKTTLVIALSTCAAPESLEDGK 344
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK-L 215
+H+ V + + ++A AL+ MY++ + +AR VF GI K+V SW +MIAA+ +
Sbjct: 345 SIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDE 404
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSA--CSNF---------------------- 251
AL F ML G +P +V SA C +
Sbjct: 405 SLHSRALEIFRLMLLDGV-RPTRTTALNVVSAVECQSVGKQLHGWIVDTGLYSDSFIGSA 463
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM------RD 292
AR +F +I D+ +WNA++ H EA+ FS M +
Sbjct: 464 LVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGN 523
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
R L+ S C GR ++H I + G +++ V NA+++MYA+C L +
Sbjct: 524 RATFLLALSAVSPDRVCYGR-------RLHGLIAESGLEADNNVANALISMYARCKSLED 576
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A F L ++ VSW S+IAAC+ +E LF RM +++PD +TF V+ AC
Sbjct: 577 ARNTFDRL-EDKSIVSWTSVIAACVDLGSCQEAIDLFQRM---ELEPDRVTFTTVLEACT 632
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+++ +H + GL +VFV L+ ++ K G+LG AR++F +E P + W++
Sbjct: 633 IVSAHREGKLVHSRARELGLESNVFVATALIHMHSKFGNLGEARRIFEAVEAPTLACWNA 692
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
++ GYAQ G + F M+ GV+P+ +T + V++ACSH GLVE+G + M +Y
Sbjct: 693 MLGGYAQTGHSQSVIDFFHAMQQRGVAPDHITFLAVVSACSHAGLVEKGARTFASMGTDY 752
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G+ E C++DLLARAG + EA DF+ M C V WK+LLA+
Sbjct: 753 GVGHGLEDYGCLIDLLARAGQLEEAYDFLQGMPCGPSDVTWKTLLAA 799
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 172/588 (29%), Positives = 284/588 (48%), Gaps = 62/588 (10%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S + L++ C+ + L V+ I D ++ M+ KC S+ DA F++
Sbjct: 29 SKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVVRMFIKCRSIHDASRVFEQ 88
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M R++V WT+M+ + + A + +M GV+P + TF SI+ AC L G
Sbjct: 89 MLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDRVTFISILNACESLAQ---G 145
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+H +I S ++ NAL+ M K + A F + R+DV SW M+ A+++
Sbjct: 146 ELVHRLIIDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYARN 205
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------------- 249
G+ EA ++ ML G PN F +V +ACS
Sbjct: 206 GHIAEAFGYYLRMLLEGVV-PNNITFLAVLAACSSARDAELVYGNVVEAEWESDTMVANA 264
Query: 250 -----------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
+ AR +F+ + D+ SWNA++A +A H ++EA+ LF M E+ D
Sbjct: 265 SINMFSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRM-PSEVAVD 323
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
T+ L C +L G +HS + ++G +++V A++TMY++C L A VF
Sbjct: 324 KTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRVFD 383
Query: 359 E-LGKNADSVSWNSIIAACLQ----HNQAEELFRLFSRMLASQIKPDHITFNDVMGA--C 411
LGKN VSWN++IAA + H++A E+FRL ML ++P T +V+ A C
Sbjct: 384 GILGKNV--VSWNNMIAAYGRDESLHSRALEIFRL---MLLDGVRPTRTTALNVVSAVEC 438
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ QLH +I TGL D F+ + L+++Y + GSLG AR++F + DV +W+
Sbjct: 439 QSVGK-----QLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWN 493
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
+++ G EAL+ F+RM G S N T + L+A S V G L+ ++ E
Sbjct: 494 AIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLALSAVSP-DRVCYGRRLHGLIA-E 551
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G+ + ++ + AR + +A + +++ D IV W S++A+
Sbjct: 552 SGLEADNNVANALISMYARCKSLEDARNTFDRLE-DKSIVSWTSVIAA 598
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 136/514 (26%), Positives = 236/514 (45%), Gaps = 52/514 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N V++L + +EAL F + + + + +T +S C++ SL+ G+ +H +
Sbjct: 294 NAMVAALAQHGFSSEALEL--FRRMPSEVAVDKTTLVIALSTCAAPESLEDGKSIHSRVA 351
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQ-ENDAI 121
+ DVV ++ MY +CG L +AR FD + +NVVSW MIA ++ + A+
Sbjct: 352 RLGLETDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRAL 411
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+++ ML GV P + T +++ A +G+QLH ++ + S +AL+ MY
Sbjct: 412 EIFRLMLLDGVRPTRTTALNVVSAVE---CQSVGKQLHGWIVDTGLYSDSFIGSALVNMY 468
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG--------- 232
+ + DAR VF I +DV +W +++ G EAL F+ ML G
Sbjct: 469 ERTGSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFL 528
Query: 233 ----AYQPNEFIFG-----------------------SVFSACSNF--ARILFNEIDSPD 263
A P+ +G S+++ C + AR F+ ++
Sbjct: 529 LALSAVSPDRVCYGRRLHGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKS 588
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+ SW ++IA + EA+ LF M EL PD +T ++L AC +G VHS
Sbjct: 589 IVSWTSVIAACVDLGSCQEAIDLFQRM---ELEPDRVTFTTVLEACTIVSAHREGKLVHS 645
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS-WNSIIAACLQHNQA 382
++G +SNV V A++ M++K L A +F+ + A +++ WN+++ Q +
Sbjct: 646 RARELGLESNVFVATALIHMHSKFGNLGEARRIFEAV--EAPTLACWNAMLGGYAQTGHS 703
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI-TKTGLAFDVFVMNG 441
+ + F M + PDHITF V+ AC+ +E + + T G+ +
Sbjct: 704 QSVIDFFHAMQQRGVAPDHITFLAVVSACSHAGLVEKGARTFASMGTDYGVGHGLEDYGC 763
Query: 442 LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
L+D+ + G L A M P V+W +L+
Sbjct: 764 LIDLLARAGQLEEAYDFLQGMPCGPSDVTWKTLL 797
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 131/266 (49%), Gaps = 17/266 (6%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ 113
GR++H I S + D + N +++MY +C SLEDAR FD++ +++VSWT++IA C
Sbjct: 542 GRRLHGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVD 601
Query: 114 NYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA 173
+AI L+ +M + P + TF ++++AC+ + + G+ +H+ + S++
Sbjct: 602 LGSCQEAIDLFQRM---ELEPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFV 658
Query: 174 QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA 233
ALI M++KF + +AR +F + + W +M+ +++ G+ + F+ M G
Sbjct: 659 ATALIHMHSKFGNLGEARRIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGV 718
Query: 234 YQPNEFIFGSVFSACSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEA 283
P+ F +V SACS+ FA + + L + LI +A EA
Sbjct: 719 -APDHITFLAVVSACSHAGLVEKGARTFASMGTDYGVGHGLEDYGCLIDLLARAGQLEEA 777
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCAC 309
M P +T +LL AC
Sbjct: 778 YDFLQGM---PCGPSDVTWKTLLAAC 800
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
Query: 386 FRLFSRMLASQ--IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
+L+ R SQ + DH F ++ CA+ L T ++ I G+ D F ++
Sbjct: 11 LQLWQRAFTSQPSVSDDHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVV 70
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
++IKC S+ A ++F M + +V W+S++ + D A F RM+ GV P+ V
Sbjct: 71 RMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDRV 130
Query: 504 TLVGVLTAC 512
T + +L AC
Sbjct: 131 TFISILNAC 139
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 180/580 (31%), Positives = 287/580 (49%), Gaps = 51/580 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+S C+++ SL R+ H + + D+ + ++++YG G +DAR+ FD++P+ +
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
W M+ N + + +KLY +++ G F +KAC+ L + G+++H
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
++K +++ L+ MY K I A VF+ I ++V W SMIA + K E
Sbjct: 167 QLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE 225
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------------- 251
L FN M + NE+ +G++ AC+
Sbjct: 226 GLVLFNRMRENNVLG-NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLL 284
Query: 252 -----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
AR +FNE DL W A+I G + + NEA+SLF +M+ E+ P+ +
Sbjct: 285 DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCV 344
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
T+ S+L C L G VH IK+G +D+NV NA++ MYAKC +A VF E
Sbjct: 345 TIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVA--NALVHMYAKCYQNRDAKYVF-E 401
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
+ D V+WNSII+ Q+ E LF RM + + P+ +T + ACA + SL +
Sbjct: 402 MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV 461
Query: 420 VTQLHCYITKTGL--AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
+ LH Y K G + V V L+D Y KCG SAR +F+ +E + ++WS++I GY
Sbjct: 462 GSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGY 521
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
+ G +L+LF M PN T +L+AC H G+V EG + M +Y P+
Sbjct: 522 GKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPS 581
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+H +C+VD+LARAG + +A D I +M D+ + + L
Sbjct: 582 TKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFL 621
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 141/523 (26%), Positives = 246/523 (47%), Gaps = 60/523 (11%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
E + YD + R ++ + AC+ L+ L G+K+H ++ +VVL +
Sbjct: 125 EVVKLYDLLMKH-GFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG-L 182
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
L+MY KCG ++ A F+ + RNVV WT+MIAG +N + + L+ +M ++ V+ +
Sbjct: 183 LDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNE 242
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIKS--EHGSHLIAQNALIAMYTKFDRILDARNVF 194
+T+G++I AC+ L ++ G+ H ++KS E S L+ +L+ MY K I +AR VF
Sbjct: 243 YTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVT--SLLDMYVKCGDISNARRVF 300
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC------ 248
+ + D+ W +MI ++ G EAL F +M +PN SV S C
Sbjct: 301 NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM-KGVEIKPNCVTIASVLSGCGLIENL 359
Query: 249 ---------------------------------SNFARILFNEIDSPDLASWNALIAGVA 275
+ A+ +F D+ +WN++I+G +
Sbjct: 360 ELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFS 419
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF--DSN 333
+ + +EA+ LF M + P+G+TV SL AC +L G +H+Y +K+GF S+
Sbjct: 420 QNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSS 479
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
V V A+L YAKC +A L+F + + ++++W+++I + LF ML
Sbjct: 480 VHVGTALLDFYAKCGDPQSARLIFDTI-EEKNTITWSAMIGGYGKQGDTIGSLELFEEML 538
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG----LMDIYIKC 449
Q KP+ TF ++ AC MV + Y + ++ ++D+ +
Sbjct: 539 KKQQKPNESTFTSILSACGHTG---MVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARA 595
Query: 450 GSLGSARKLFNFME-NPDVVSWSSLILG---YAQFGCGDEALK 488
G L A + M PDV + + + G +++F G+ +K
Sbjct: 596 GELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIK 638
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 175/330 (53%), Gaps = 11/330 (3%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR++F++I PD W ++ + + E + L+ + D + L AC
Sbjct: 95 ARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTE 154
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
L G ++H ++K+ NV V +L MYAKC + +A VF ++ + V W S
Sbjct: 155 LQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLR-NVVCWTS 212
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+IA ++++ EE LF+RM + + + T+ ++ AC K+++L H + K+G
Sbjct: 213 MIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSG 272
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
+ ++ L+D+Y+KCG + +AR++FN + D+V W+++I+GY G +EAL LF
Sbjct: 273 IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ 332
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN---EYGIIPTREHCSCVVDLL 548
+M+ + + PN VT+ VL+ C GL+E L L R + + GI T + +V +
Sbjct: 333 KMKGVEIKPNCVTIASVLSGC---GLIEN-LELGRSVHGLSIKVGIWDTNV-ANALVHMY 387
Query: 549 ARAGCVHEAEDFINQMACDADIVVWKSLLA 578
A+ +A+ ++ +M + DIV W S+++
Sbjct: 388 AKCYQNRDAK-YVFEMESEKDIVAWNSIIS 416
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 202/442 (45%), Gaps = 48/442 (10%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
++ K +L E LV ++ + N N+ TY LI AC+ L +L G+ H ++ S
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMREN-NVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSG 272
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ L +L+MY KCG + +AR F++ ++V WTAMI G + N N+A+ L+
Sbjct: 273 IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ 332
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + P T S++ C + ++ LGR +H IK +A NAL+ MY K
Sbjct: 333 KMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVA-NALVHMYAKCY 391
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ DA+ VF + KD+ +W S+I+ FS+ G EAL F+ M + + PN S+F
Sbjct: 392 QNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM-NSESVTPNGVTVASLF 450
Query: 246 SACSNF------------------------------------------ARILFNEIDSPD 263
SAC++ AR++F+ I+ +
Sbjct: 451 SACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKN 510
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+W+A+I G + ++ LF EM ++ P+ T S+L AC + +G + S
Sbjct: 511 TITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFS 570
Query: 324 YIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ K F + ++ M A+ L AL + +++ D + + + C H++
Sbjct: 571 SMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRF 630
Query: 383 EELFRLFSRMLASQIKPDHITF 404
+ + +ML + PD ++
Sbjct: 631 DLGEIVIKKML--DLHPDDASY 650
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 189/613 (30%), Positives = 298/613 (48%), Gaps = 49/613 (7%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+ LC +AL + S + Y L C R+ + G + H +
Sbjct: 69 LRELCAHGELQQALWLLESSPEPPD----EDAYVALFHLCEWRRAAEHGLRACGHADAAH 124
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ L N +L+M + G A F KMP+R+V SW M+ G + +A+ LY
Sbjct: 125 GTFGLRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYH 184
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+ML +G P +TF ++++C G+ + +GR++HAHV++ G + NAL+ MY K
Sbjct: 185 RMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCG 244
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ AR VF G++ D SW +MIA + +E EA + +PN SV
Sbjct: 245 DVEAARKVFDGMSLTDCISWNAMIAGHFE-NHECEAGLELFLHMLEDEVEPNLMTITSVT 303
Query: 246 SACS-----NFAR-----------------------------------ILFNEIDSPDLA 265
A +FA+ +F+ +++ D
Sbjct: 304 VASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAM 363
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW A+I+G + ++A+ +++ M + PD +TV S L AC L G+++H
Sbjct: 364 SWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELA 423
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA-CLQHNQAEE 384
GF + V NA++ MYAK ++ A+ VFK + + D +SW+S+IA C H E
Sbjct: 424 TSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYM-PDKDVISWSSMIAGFCFNHKNFEA 482
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
L+ F MLA +KP+ +TF + ACA SL ++H ++ + G+A + +V N L+D
Sbjct: 483 LY-YFRHMLA-DVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLD 540
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y+KCG G A F DVVSW+ ++ G+ G GD AL F M G P+ VT
Sbjct: 541 LYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVT 600
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
V +L CS G+V +G L+ M +Y I+P +H +C+VDLL+R G + E +FIN+M
Sbjct: 601 FVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRM 660
Query: 565 ACDADIVVWKSLL 577
D VW +LL
Sbjct: 661 PITPDAAVWGALL 673
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 177/338 (52%), Gaps = 8/338 (2%)
Query: 241 FGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
FG + A FA++ D+ SWN ++ G EA+ L+ M PD
Sbjct: 142 FGETWHAWKVFAKM-----PERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVY 196
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
T +L +C G L G +VH+++++ G V V NA++TMYAKC + A VF +
Sbjct: 197 TFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGM 256
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
D +SWN++IA ++++ E LF ML +++P+ +T V A ++ L+
Sbjct: 257 SLT-DCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFA 315
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
++H K G A DV N L+ +Y G +G A +F+ ME D +SW+++I GY +
Sbjct: 316 KEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKN 375
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
G D+AL+++ M VSP+ VT+ L AC+ +G ++ G+ L+ + ++ G I
Sbjct: 376 GFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSK-GFIRYIVV 434
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +V++ A++ + +A + M D D++ W S++A
Sbjct: 435 ANALVEMYAKSKIIEKAIEVFKYMP-DKDVISWSSMIA 471
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 184/637 (28%), Positives = 320/637 (50%), Gaps = 68/637 (10%)
Query: 4 DYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHI 61
D + S + NL EA++ Y + + I+P +A L+ A + L+ + LG+++H H+
Sbjct: 63 DLLRSKVRSNLLREAVLTY---IDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHV 119
Query: 62 LLSKCQPD-VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
D V + N ++N+Y KCG FD++ +RN VSW ++I+ + A
Sbjct: 120 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 179
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLG---SVCLGRQLHAHVI-KSEHGSHLIAQNA 176
++ + ML V P FT S+ ACS + +G+Q+HA+ + K E S +I N
Sbjct: 180 LEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFII--NT 237
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
L+AMY K ++ ++ + +D+ +W +++++ + LEAL + EM+ G +P
Sbjct: 238 LVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGV-EP 296
Query: 237 NEFIFGSVFSACSNFARI-----------------------------------------L 255
+ F SV ACS+ + +
Sbjct: 297 DGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRV 356
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE-LLPDGLTVHSLLCACIGRLT 314
F+ + + WNA+I G A + EA+ LF EM + LL + T+ ++ AC+
Sbjct: 357 FDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGA 416
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
+ +H +++K G D + V NA++ MY++ + A +F ++ ++ D V+WN+II
Sbjct: 417 FSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKM-EDRDLVTWNTIIT 475
Query: 375 ACLQHNQAEELFRLFSRM---------LASQI--KPDHITFNDVMGACAKMASLEMVTQL 423
+ + E+ + +M AS++ KP+ IT ++ +CA +++L ++
Sbjct: 476 GYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEI 535
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H Y K LA DV V + L+D+Y KCG L +RK+F+ + +V++W+ +++ Y G
Sbjct: 536 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNS 595
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
+A+ + M GV PN VT + V ACSH G+V EGL ++ M+ +YG+ P+ +H +C
Sbjct: 596 QDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYAC 655
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIV-VWKSLLAS 579
VVDLL RAG V EA IN + + D W SLL +
Sbjct: 656 VVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGA 692
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 140/536 (26%), Positives = 245/536 (45%), Gaps = 72/536 (13%)
Query: 104 WTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI 163
W ++ ++ +A+ YI M+ G+ P F F +++KA + L + LG+Q+HAHV
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 164 KSEHG-SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA---AFSKLGYEL 219
K +G + N L+ +Y K VF I+ ++ SW S+I+ +F K L
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 220 EAL-CHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------------- 251
EA C +E + +P+ F SV ACSNF
Sbjct: 181 EAFRCMLDEDV-----EPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFII 235
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+++L + DL +WN +++ + + EA+ EM +
Sbjct: 236 NTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVE 295
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALL 355
PDG T+ S+L AC L G ++H+Y +K G D N V +A++ MY C + +
Sbjct: 296 PDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCR 355
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ-IKPDHITFNDVMGACAKM 414
VF + + WN++I Q+ EE LF M S + + T V+ AC +
Sbjct: 356 VFDGMFDRKIGL-WNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRS 414
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+ +H ++ K GL D FV N LMD+Y + G + A+++F ME+ D+V+W+++I
Sbjct: 415 GAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTII 474
Query: 475 LGYAQFGCGDEALKLFTRMRSL-----------GVSPNLVTLVGVLTACSHVGLVEEG-- 521
GY ++AL + +M+ L + PN +TL+ +L +C+ + + +G
Sbjct: 475 TGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKE 534
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+H Y I N + S +VD+ A+ GC+ + +Q+ +++ W ++
Sbjct: 535 IHAYAIKNNLATDVAV---GSALVDMYAKCGCLQMSRKVFDQIPI-RNVITWNVIV 586
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 134/533 (25%), Positives = 247/533 (46%), Gaps = 67/533 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLIS---ACSSL---RSLQLGRK 56
N +SSLC + AL A+ + + PS++ L+S ACS+ L +G++
Sbjct: 164 NSLISSLCSFEKWEMALEAFRCMLDED---VEPSSFT-LVSVALACSNFPMPEGLLMGKQ 219
Query: 57 VHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQ 116
VH + L K + + + N ++ MYGK G L +++ R++V+W +++ QN Q
Sbjct: 220 VHAY-GLRKGELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQ 278
Query: 117 ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH-GSHLIAQN 175
+A++ +M+ GV P FT S++ ACS L + G++LHA+ +K+ + +
Sbjct: 279 FLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGS 338
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM------- 228
AL+ MY ++L VF G+ + + W +MI +++ Y+ EAL F EM
Sbjct: 339 ALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLL 398
Query: 229 -------------LHHGAYQPNEFIFGSVFS--------------------ACSNFARIL 255
+ GA+ E I G V + A+ +
Sbjct: 399 ANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRI 458
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE-----------LLPDGLTVHS 304
F +++ DL +WN +I G +A+ + +M+ E L P+ +T+ +
Sbjct: 459 FGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMT 518
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
+L +C L +G ++H+Y IK ++V V +A++ MYAKC L + VF ++
Sbjct: 519 ILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIR- 577
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
+ ++WN I+ A H +++ + M+ +KP+ +TF V AC+ + ++
Sbjct: 578 NVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIF 637
Query: 425 CYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM-ENPDVV-SWSSLI 474
+ K G+ ++D+ + G + A +L N + N D +WSSL+
Sbjct: 638 YNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLL 690
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/437 (21%), Positives = 190/437 (43%), Gaps = 59/437 (13%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N +SSLC+ + EAL ++ + + P T + ++ ACS L L+ G+++H +
Sbjct: 267 NTVLSSLCQNEQFLEAL---EYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAY 323
Query: 61 ILLS-KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
L + + + + +++MY C + FD M R + W AMI G +QN + +
Sbjct: 324 ALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEE 383
Query: 120 AIKLYIQMLQS-GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
A+ L+I+M +S G++ T ++ AC G+ +H V+K QNAL+
Sbjct: 384 ALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALM 443
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAA--FSKLGYELEALCHFNEMLHHGA--- 233
MY++ +I A+ +F + +D+ +W ++I FS+ + + H ++L A
Sbjct: 444 DMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASER 503
Query: 234 -----YQPNEFIFGSVFSACS--------------------------------------- 249
+PN ++ +C+
Sbjct: 504 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 563
Query: 250 -NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCA 308
+R +F++I ++ +WN ++ H N+ +A+ + M + + P+ +T S+ A
Sbjct: 564 LQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAA 623
Query: 309 CIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
C + +G+++ + K G + + ++ + + + A + + +N D
Sbjct: 624 CSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKA 683
Query: 368 -SWNSIIAACLQHNQAE 383
+W+S++ AC HN E
Sbjct: 684 GAWSSLLGACRIHNNLE 700
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 136/292 (46%), Gaps = 14/292 (4%)
Query: 240 IFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
+ +V+ A S F ++ SP+ W L+ + EA+ + +M + PD
Sbjct: 40 VASTVYGAPSKF----ISQSHSPEW--WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDN 93
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD-SNVPVCNAILTMYAKCSVLCNALLVFK 358
+LL A + G Q+H+++ K G+ +V V N ++ +Y KC VF
Sbjct: 94 FAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFD 153
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ + + VSWNS+I++ + E F ML ++P T V AC+ E
Sbjct: 154 RISER-NQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPE 212
Query: 419 ---MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
M Q+H Y + G + F++N L+ +Y K G L S++ L E D+V+W++++
Sbjct: 213 GLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLS 271
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLY 525
Q EAL+ M GV P+ T+ VL ACSH+ ++ G LH Y
Sbjct: 272 SLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAY 323
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 15/219 (6%)
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
W ++ + ++ N E + M+ IKPD+ F ++ A A + +++ Q+H ++
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 429 KTGLAFD-VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K G D V V N L+++Y KCG G+ K+F+ + + VSW+SLI F + AL
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE-----EGLHLYRIMENEYG--IIPTREH 540
+ F M V P+ TLV V ACS+ + E + +H Y + + E II T
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFIINT--- 237
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+V + + G + ++ + D+V W ++L+S
Sbjct: 238 ---LVAMYGKMGKLASSKVLLGSFE-GRDLVTWNTVLSS 272
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 174/616 (28%), Positives = 302/616 (49%), Gaps = 104/616 (16%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
+P+V+ N ++N Y K GSL DA F +MP+R+V SW +++G Q+ + DA++ ++
Sbjct: 92 EPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVS 151
Query: 127 MLQSG-VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK--------------------- 164
M +SG +P FTFG +K+C LG + QL + K
Sbjct: 152 MRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCG 211
Query: 165 -----SEHGSHL-----IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
S+ S + +N+++A Y K + A +F + +DV SW M++A S+
Sbjct: 212 AVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQ 271
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------- 251
G EAL +M H+ + + + S +AC+
Sbjct: 272 SGRAREALSVAVDM-HNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPY 330
Query: 252 -----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
AR +F+ + + SW LI G + +E++ LF++MR
Sbjct: 331 VASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAEL 390
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ D + +++ C R+ + Q+HS +K G V + N++++MYAKC L NA
Sbjct: 391 MTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAE 450
Query: 355 LVFKEL---------------------GK---------NADSVSWNSIIAACLQHNQAEE 384
+F + GK + ++WN+++ A +QH E+
Sbjct: 451 SIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEED 510
Query: 385 LFRLFSRMLASQ-IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
+++S ML + + PD +T+ + CA M + ++ Q+ + K GL D VMN ++
Sbjct: 511 GLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVI 570
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
+Y KCG + ARK+F+F+ D+VSW+++I GY+Q G G +A+++F M G P+ +
Sbjct: 571 TMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYI 630
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
+ V VL++CSH GLV+EG + +++ ++ + P EH SC+VDLLARAG + EA++ I++
Sbjct: 631 SYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDE 690
Query: 564 MACDADIVVWKSLLAS 579
M VW +LL++
Sbjct: 691 MPMKPTAEVWGALLSA 706
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 236/481 (49%), Gaps = 48/481 (9%)
Query: 3 NDYVSSLCKQNLYNEAL-VAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
N VS+L + EAL VA D +N +R+ +TY ++AC+ L SL G+++H +
Sbjct: 263 NMMVSALSQSGRAREALSVAVDM--HNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQV 320
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ S D + + ++ +Y KCG ++AR F + RN VSWT +I G Q ++++
Sbjct: 321 IRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESL 380
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+L+ QM + QF +II CS +CL RQLH+ +KS H ++ N+LI+MY
Sbjct: 381 ELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMY 440
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K + +A ++FS + +D+ SW M+ A+S++G
Sbjct: 441 AKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGN-----------------------I 477
Query: 242 GSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGL 300
G AR F+ + + ++ +WNA++ H + + ++S M +++++PD +
Sbjct: 478 GK--------AREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWV 529
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
T +L C G Q+ + +K+G + V NA++TMY+KC + A +F L
Sbjct: 530 TYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFL 589
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
+ D VSWN++I QH ++ +F ML KPD+I++ V+ +C+ +V
Sbjct: 590 SRK-DLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSG---LV 645
Query: 421 TQLHCYITKTGLAFDVFVMNGL------MDIYIKCGSLGSARKLFNFME-NPDVVSWSSL 473
+ Y L D V GL +D+ + G+L A+ L + M P W +L
Sbjct: 646 QEGKFYFDM--LKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGAL 703
Query: 474 I 474
+
Sbjct: 704 L 704
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 34/192 (17%)
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR--------- 456
D + +C +L LH + GLA VF+ N L+ Y+ CG+L AR
Sbjct: 33 DALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITE 92
Query: 457 -----------------------KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
+LF M DV SW++L+ GY Q G +A++ F M
Sbjct: 93 PNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSM 152
Query: 494 RSLGVS-PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAG 552
R G S PN T + +C +G E L L ++ ++G + + +VD+ R G
Sbjct: 153 RRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLL-TKFGFQGDPDVATGIVDMFVRCG 211
Query: 553 CVHEAEDFINQM 564
V A +Q+
Sbjct: 212 AVDFASKQFSQI 223
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 180/555 (32%), Positives = 282/555 (50%), Gaps = 47/555 (8%)
Query: 35 PSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
P TY L++A + L L R++ D + P++ +N +L+ L D
Sbjct: 43 PPTYVLNHLLTAYARSGRLPLARRLFDAM----PDPNLFTRNALLSALAHARLLPDMDRL 98
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ-------SGVMPGQFTFGSIIKA 145
F MPQR+ VS+ A+IAG S A Y +L+ + V P + T ++ A
Sbjct: 99 FASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMA 158
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
S LG LGRQ+H +++ G++ + L+ MY K I DA+ VF + K+V +
Sbjct: 159 ASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMY 218
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLA 265
+MI + C E AR +F + D
Sbjct: 219 NTMITGLLR--------CKMVEE-----------------------ARGVFEAMVDRDSI 247
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
+W ++ G+ + +EA+ +F MR + D T S+L AC +G Q+H+Y
Sbjct: 248 TWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYT 307
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQHNQAEE 384
I+ +D N+ V +A++ MY+KC + A VF+ + KN +SW ++I Q+ EE
Sbjct: 308 IRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNI--ISWTAMIVGYGQNGCGEE 365
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
R+FS M IKP+ T V+ +CA +ASLE Q HC +GL + V + L+
Sbjct: 366 AVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVT 425
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y KCGS+ A +LF+ M D VS+++L+ GYAQFG E + LF +M GV PN VT
Sbjct: 426 LYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVT 485
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
+GVL+ACS GLVE+G + M+ ++GI+ +H +C++DL +R+G + EAE+FI QM
Sbjct: 486 FIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQM 545
Query: 565 ACDADIVVWKSLLAS 579
D + W +LL++
Sbjct: 546 PRCPDAIGWATLLSA 560
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 199/429 (46%), Gaps = 81/429 (18%)
Query: 32 RIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
R+RPS T +G++ A S+L LGR+VH I+ + +++MY K G + DA
Sbjct: 144 RVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDA 203
Query: 90 RMGFDKMPQRNVV-------------------------------SWTAMIAGCSQNYQEN 118
+ FD+M +NVV +WT M+ G +QN ++
Sbjct: 204 KRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQS 263
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
+A+ ++ +M GV Q+TFGSI+ AC L + G+Q+HA+ I++ + ++ +AL+
Sbjct: 264 EALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALV 323
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
MY+K I A VF + K++ SW +MI + + G EA+ F+EM G +PN+
Sbjct: 324 DMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDG-IKPND 382
Query: 239 FIFGSVFSACSNFARI----------------------------------------LFNE 258
F GSV S+C+N A + LF+E
Sbjct: 383 FTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDE 442
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ D S+ AL++G A A E + LF +M + + P+G+T +L AC + +G
Sbjct: 443 MPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKG 502
Query: 319 MQVHSYIIKMGFDSNVPVCN----AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
SY M D + + + ++ +Y++ L A +++ + D++ W ++++
Sbjct: 503 C---SYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLS 559
Query: 375 ACLQHNQAE 383
AC E
Sbjct: 560 ACRLRGDME 568
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 131/245 (53%), Gaps = 2/245 (0%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
V+ L + L +EAL + + I T+ +++AC +L + + G+++H + + +
Sbjct: 253 VTGLTQNGLQSEALDVFR-RMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTL 311
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
++ + + +++MY KC S+ A F +M +N++SWTAMI G QN +A++++
Sbjct: 312 YDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFS 371
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M G+ P FT GS+I +C+ L S+ G Q H + S ++ +AL+ +Y K
Sbjct: 372 EMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCG 431
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I DA +F + D S+ ++++ +++ G E + F +ML G +PN F V
Sbjct: 432 SIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGV-KPNGVTFIGVL 490
Query: 246 SACSN 250
SACS
Sbjct: 491 SACSR 495
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 112/193 (58%), Gaps = 7/193 (3%)
Query: 24 FSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYG 81
FS+ T+ I+P+ T +IS+C++L SL+ G + H L+S +P + + + ++ +YG
Sbjct: 370 FSEMQTD-GIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYG 428
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
KCGS+EDA FD+MP + VS+TA+++G +Q + + I L+ +ML GV P TF
Sbjct: 429 KCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIG 488
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILDARNVFSGIAR 199
++ ACS G V G + H ++ +HG L+ + +I +Y++ R+ +A + R
Sbjct: 489 VLSACSRSGLVEKGCS-YFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPR 547
Query: 200 -KDVTSWGSMIAA 211
D W ++++A
Sbjct: 548 CPDAIGWATLLSA 560
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 166/519 (31%), Positives = 270/519 (52%), Gaps = 43/519 (8%)
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
+V++W ++ Q + +A+ ++ M+ S V TF ++ +GL + LG+Q+H
Sbjct: 870 DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIH 929
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
V++S + N LI MY K + AR VF + D+ SW +MI+ + G E
Sbjct: 930 GIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEE 989
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------------- 251
++ F ++L G P++F SV ACS+
Sbjct: 990 CSVGMFVDLLR-GGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTT 1048
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
A LF D DLASWNA++ G + +A+ L+ M++ +
Sbjct: 1049 LIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERAN 1108
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+T+ + A G + L QG Q+ + ++K GF+ ++ V + +L MY KC + +A +F
Sbjct: 1109 QITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFN 1168
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
E+ + D V+W ++I+ C+++ Q E + M S+++PD TF ++ AC+ + +LE
Sbjct: 1169 EI-PSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALE 1227
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
Q+H K AFD FVM L+D+Y KCG++ AR LF + SW+++I+G A
Sbjct: 1228 QGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLA 1287
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
Q G +EAL+ F M+S GV+P+ VT +GVL+ACSH GLV E + M+ YGI P
Sbjct: 1288 QHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEI 1347
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
EH SC+VD L+RAG + EAE I+ M +A ++++LL
Sbjct: 1348 EHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLL 1386
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 150/548 (27%), Positives = 251/548 (45%), Gaps = 26/548 (4%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ--RNVVSWTAMI 108
L LG++ H IL S PD L N+++ MY KCGSL AR FD P R++V+W A++
Sbjct: 642 LPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAIL 701
Query: 109 AGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG 168
+ + + D L+ + +S V + T + K C S LH + +K
Sbjct: 702 SAHAD--KARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQ 759
Query: 169 SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
+ AL+ +Y KF RI +AR +F G+ +DV W M+ A+ G E EAL F+E
Sbjct: 760 WDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEF 819
Query: 229 LHHGAYQPNEFIFGSVFSACSNFARILFNEIDS-----------------PDLASWNALI 271
G +P++ ++ + +L ++ D+ +WN +
Sbjct: 820 NRTG-LRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTL 878
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
+ EA+ F +M + + DGLT +L G L G Q+H +++ G D
Sbjct: 879 SWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLD 938
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
V V N ++ MY K + A VF ++ + D VSWN++I+ C E +F
Sbjct: 939 QVVSVGNCLINMYVKTGSVSRARTVFWQMNE-VDLVSWNTMISGCALSGLEECSVGMFVD 997
Query: 392 MLASQIKPDHITFNDVMGACAKM-ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
+L + PD T V+ AC+ + + TQ+H K G+ D FV L+D+Y K G
Sbjct: 998 LLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSG 1057
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ A LF + D+ SW++++ GY G +AL+L+ M+ G N +TL
Sbjct: 1058 KMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAK 1117
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
A + +++G + ++ G S V+D+ + G + A N++ D
Sbjct: 1118 AAGGLVGLKQGKQIQAVVVKR-GFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDD- 1175
Query: 571 VVWKSLLA 578
V W ++++
Sbjct: 1176 VAWTTMIS 1183
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 218/468 (46%), Gaps = 44/468 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++S + L L+LG+++H ++ S V + N ++NMY K GS+ AR F +M
Sbjct: 908 TFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQM 967
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC-LG 155
+ ++VSW MI+GC+ + E ++ +++ +L+ G++P QFT S+++ACS LG C L
Sbjct: 968 NEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLA 1027
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
Q+HA +K+ LI +Y+K ++ +A +F D+ SW +M+ +
Sbjct: 1028 TQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVS 1087
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G +AL + M G + N+ + A
Sbjct: 1088 GDFPKALRLYILMQESGE-RANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFV 1146
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR +FNEI SPD +W +I+G + A+ + MR ++
Sbjct: 1147 ISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKV 1206
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD T +L+ AC L QG Q+H+ +K+ + V +++ MYAKC + +A
Sbjct: 1207 QPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARG 1266
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+FK + SWN++I QH AEE + F M + + PD +TF V+ AC+
Sbjct: 1267 LFKRT-NTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSG 1325
Query: 416 SL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
+ E + G+ ++ + L+D + G + A K+ + M
Sbjct: 1326 LVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSM 1373
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 139/563 (24%), Positives = 259/563 (46%), Gaps = 30/563 (5%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T A + C S +H + + Q DV + ++N+Y K G + +AR+ FD M
Sbjct: 729 TLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGM 788
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG- 155
R+VV W M+ E +A+ L+ + ++G+ P T ++ + +V
Sbjct: 789 GLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQ 848
Query: 156 -RQLHAHVIK------SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG-- 206
+QL A+ K + GS +IA N ++ + + +A + F + V G
Sbjct: 849 LKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLT 908
Query: 207 -----SMIAAFS--KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEI 259
S++A + +LG ++ + L N I V + + AR +F ++
Sbjct: 909 FVVMLSVVAGLNCLELGKQIHGIV-VRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQM 967
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG- 318
+ DL SWN +I+G A ++ +F ++ LLPD TV S+L AC +L G
Sbjct: 968 NEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACS---SLGGGC 1024
Query: 319 ---MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
Q+H+ +K G + V ++ +Y+K + A +F D SWN+++
Sbjct: 1025 HLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVN-QDGFDLASWNAMMHG 1083
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
+ + RL+ M S + + IT + A + L+ Q+ + K G D
Sbjct: 1084 YIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLD 1143
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
+FV++G++D+Y+KCG + SAR++FN + +PD V+W+++I G + G + AL + MR
Sbjct: 1144 LFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRL 1203
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCV 554
V P+ T ++ ACS + +E+G ++ ++ P + +VD+ A+ G +
Sbjct: 1204 SKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFV--MTSLVDMYAKCGNI 1261
Query: 555 HEAEDFINQMACDADIVVWKSLL 577
+A + + I W +++
Sbjct: 1262 EDARGLFKRTNT-SRIASWNAMI 1283
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 216/482 (44%), Gaps = 76/482 (15%)
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI--A 198
SI++ + LG++ HA ++ S H N LI MY+K + AR +F
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDT 690
Query: 199 RKDVTSWGSMIAAFS---KLGYELEALCHFN-------------------------EMLH 230
+D+ +W ++++A + + G+ L L + E LH
Sbjct: 691 SRDLVTWNAILSAHADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLH 750
Query: 231 HGAY----QPNEFIFGSVFSACSNF-----ARILFNEIDSPDLASWNALIAGVASHSNAN 281
A Q + F+ G++ + + F AR+LF+ + D+ WN ++
Sbjct: 751 GYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEY 810
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL--YQGMQVHSYIIKMGFDSNVPVCNA 339
EA+ LFSE L PD +T+ +L + + +Q Q+ +Y K
Sbjct: 811 EALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTK------------ 858
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
L ++ + +D ++WN ++ LQ + E F M+ S++
Sbjct: 859 --------------LFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVAC 904
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D +TF ++ A + LE+ Q+H + ++GL V V N L+++Y+K GS+ AR +F
Sbjct: 905 DGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVF 964
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
M D+VSW+++I G A G + ++ +F + G+ P+ T+ VL ACS +G
Sbjct: 965 WQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLG--- 1021
Query: 520 EGLHLYRIMEN---EYGIIPTREHCSCVVDLLARAGCVHEAED-FINQMACDADIVVWKS 575
G HL + + G++ + ++D+ +++G + EAE F+NQ D+ W +
Sbjct: 1022 GGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGF--DLASWNA 1079
Query: 576 LL 577
++
Sbjct: 1080 MM 1081
>gi|302798965|ref|XP_002981242.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
gi|300151296|gb|EFJ17943.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
Length = 734
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 176/586 (30%), Positives = 300/586 (51%), Gaps = 55/586 (9%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+A ++AC+ L L+ GR++H +L S DVV+QN ++ MY +CGS+ + FD M
Sbjct: 115 FASALAACAGLGDLEQGREIHKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAM 174
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P++N+VSW AMI+ Q A++LY +M + + P F F S++ AC+ LG++ LG
Sbjct: 175 PRKNLVSWNAMISAFVQCDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLELGS 234
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H + ++ +NALI MY+K + +A VFSG+A +DV +W SMIA +++LG
Sbjct: 235 SIHQRITSLGLQRDIVMENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLG 294
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+ EA ++ M P F ++ SACS
Sbjct: 295 FGSEAFAFYDGM-RRDCVSPTSATFVALLSACSTLEQGKHLHEEVKAFGFESITVVETAL 353
Query: 252 ------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
A LF ++ D SW+A++ A + +A++LF R+++ +G
Sbjct: 354 MFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLF-----RQMILEG 408
Query: 300 L-----TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ T S L AC + + I G D + +++ Y+KC + A
Sbjct: 409 MQLSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEAR 468
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F + ++ D ++W +I Q ++ LF RM ++PD +TF+ V+ AC
Sbjct: 469 KIFDRM-ESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQAC--- 524
Query: 415 ASLEMVTQLHCYI-TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
++LE ++H I G F+ NGL+++Y +CGS+ AR++F M+ +SWS++
Sbjct: 525 SNLEDGREVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESMDRSSRISWSAI 584
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
+ A+ G D+ + + M + GV P+ VTL+ +L +CSH GL +E H + + +++
Sbjct: 585 MTLCARHGQHDDIIDTYRLMVNEGVVPDGVTLIAILNSCSHAGLTDEACHYFTWIISDFE 644
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ EH C+VDLL RAG + EAE+ I+ M D+V ++LA+
Sbjct: 645 LPHLDEHYQCMVDLLCRAGRLDEAEELIS-MIDRPDVVTLNTMLAA 689
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 167/584 (28%), Positives = 296/584 (50%), Gaps = 55/584 (9%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S YA L+ C S R++ GR++HD + S L+ ++ MY KCG L DA+ FD+
Sbjct: 15 SRYARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDE 74
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ +N W MI+G +++ + +A++L+ +M + P F F S + AC+GLG + G
Sbjct: 75 IADKNDFVWNLMISGYARSGKNREALELFHKM---DIPPNGFIFASALAACAGLGDLEQG 131
Query: 156 RQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
R++H V++S S ++ QN+L+ MY + +L+ +F + RK++ SW +MI+AF +
Sbjct: 132 REIHKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQ 191
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------------- 254
Y +AL ++ M +PN F+F S+ +AC++ +
Sbjct: 192 CDYPEQALELYHRMKRE-RLEPNGFVFASLLTACASLGNLELGSSIHQRITSLGLQRDIV 250
Query: 255 --------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+F+ + + D+ +W ++IAG A +EA + + MR
Sbjct: 251 MENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDGMRRDC 310
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ P T +LL AC TL QG +H + GF+S V A++ MY++C L +A
Sbjct: 311 VSPTSATFVALLSACS---TLEQGKHLHEEVKAFGFESITVVETALMFMYSRCGSLEDAE 367
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F ++ + D VSW++++ + Q + LF +M+ ++ TF + AC+
Sbjct: 368 FLFAKM-QQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLK 426
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+ + I +G+ + L+ Y KCG + ARK+F+ ME+ DV++W+ +I
Sbjct: 427 RDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRMESRDVLTWTVMI 486
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYG 533
GYAQ G AL+LF RM+ GV P+ VT VL ACS+ +E+G ++ RI+ + G
Sbjct: 487 KGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSN---LEDGREVHARILAAQGG 543
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ + + ++++ AR G + +A M + I W +++
Sbjct: 544 KM-SDFLGNGLINMYARCGSMRDARQIFESMDRSSRI-SWSAIM 585
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 188/442 (42%), Gaps = 82/442 (18%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
+EA YD + + + +T+ L+SACS+L + G+ +H+ + + V++
Sbjct: 297 SEAFAFYDGMRRDC-VSPTSATFVALLSACSTL---EQGKHLHEEVKAFGFESITVVETA 352
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
++ MY +CGSLEDA F KM Q++ VSW+AM+ +Q A+ L+ QM+ G+
Sbjct: 353 LMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLS 412
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
TF S ++ACS L + + + S + L++ Y+K + +AR +F
Sbjct: 413 LPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFD 472
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---- 251
+ +DV +W MI +++ G AL F+ M G +P+ F SV ACSN
Sbjct: 473 RMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGV-EPDSVTFSSVLQACSNLEDGR 531
Query: 252 ----------------------------------ARILFNEIDSPDLASWNALIAGVASH 277
AR +F +D SW+A++ A H
Sbjct: 532 EVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESMDRSSRISWSAIMTLCARH 591
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
++ + + M + ++PDG+T+ ++L +C + ++II D +P
Sbjct: 592 GQHDDIIDTYRLMVNEGVVPDGVTLIAILNSCSHAGLTDEACHYFTWIIS---DFELPH- 647
Query: 338 NAILTMYAKCSV--LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
L + +C V LC A + ++AEEL + R
Sbjct: 648 ---LDEHYQCMVDLLCRAGRL-----------------------DEAEELISMIDR---- 677
Query: 396 QIKPDHITFNDVMGACAKMASL 417
PD +T N ++ AC L
Sbjct: 678 ---PDVVTLNTMLAACKNQQDL 696
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 151/297 (50%), Gaps = 21/297 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ + ACS R +L + + + I S ++ +++ Y KCG +E+AR FD+M
Sbjct: 415 TFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRM 474
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+V++WT MI G +Q A++L+ +M GV P TF S+++ACS L GR
Sbjct: 475 ESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSNLED---GR 531
Query: 157 QLHAHVIKSEHG--SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
++HA ++ ++ G S + N LI MY + + DAR +F + R SW +++ ++
Sbjct: 532 EVHARILAAQGGKMSDFLG-NGLINMYARCGSMRDARQIFESMDRSSRISWSAIMTLCAR 590
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------NFARILFNEIDSPDLA 265
G + + + M++ G P+ ++ ++CS ++ + ++ + P L
Sbjct: 591 HGQHDDIIDTYRLMVNEGVV-PDGVTLIAILNSCSHAGLTDEACHYFTWIISDFELPHLD 649
Query: 266 S-WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
+ ++ + +EA L S M DR PD +T++++L AC + L++G +
Sbjct: 650 EHYQCMVDLLCRAGRLDEAEELIS-MIDR---PDVVTLNTMLAACKNQQDLHRGART 702
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 185/601 (30%), Positives = 292/601 (48%), Gaps = 42/601 (6%)
Query: 20 VAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNM 79
+ Y + ++++ ST ++SA + +L LG VH + ++ + + +++M
Sbjct: 312 IEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 80 YGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTF 139
Y KC +E A F+ + +RN V W AMI G + N + + ++L++ M SG FTF
Sbjct: 372 YSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 140 GSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR 199
S++ C+ + +G Q H+ +IK + +L NAL+ MY K + DAR +F +
Sbjct: 432 TSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCD 491
Query: 200 KDVTSWGSMIAAFSKLGYELEALCHFNEMLH--------------------HGAYQPNEF 239
+D SW ++I + + E EA F M HG YQ +
Sbjct: 492 RDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQV 551
Query: 240 IFGSV-----------------FSACS--NFARILFNEIDSPDLASWNALIAGVASHSNA 280
SV +S C AR +F+ + + S NALIAG S +N
Sbjct: 552 HCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGY-SQNNL 610
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN-A 339
EA+ LF EM + + P +T +++ AC +L G Q H IIK GF S +
Sbjct: 611 EEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGIS 670
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
+L +Y + A +F EL V W +++ Q+ EE + + M P
Sbjct: 671 LLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALP 730
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D TF V+ C+ ++SL +H I D N L+D+Y KCG + S+ ++F
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVF 790
Query: 460 NFMEN-PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
+ M +VVSW+SLI GYA+ G ++ALK+F MR + P+ +T +GVLTACSH G V
Sbjct: 791 DEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKV 850
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+G ++ +M +YGI +H +C+VDLL R G + EA+DFI D +W SLL
Sbjct: 851 SDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLG 910
Query: 579 S 579
+
Sbjct: 911 A 911
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 268/520 (51%), Gaps = 9/520 (1%)
Query: 50 SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIA 109
+L++G+ VH L+ + L N I+++Y KC + A F+ + +++V +W +M++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLS 133
Query: 110 GCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGS 169
S Q ++ ++ + ++ + P +FTF ++ + +V GRQ+H +IK
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLER 193
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
+ AL+ MY K DR+ DA+ VF GI + W + + + K G EA+ F M
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMR 253
Query: 230 HHGAYQPNEFIFGSVFSACSNF-----ARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
G ++P+ F +V + + AR+LF E+ SPD+ +WN +I+G A+
Sbjct: 254 GEG-HRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAI 312
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
F MR + T+ S+L A L G+ VH+ IK+G SN+ V +++++MY
Sbjct: 313 EYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
+KC + A VF+ L + D V WN++I + ++ ++ LF M +S D TF
Sbjct: 373 SKCEKMEAAAKVFEALEERND-VLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
++ CA LEM +Q H I K L ++FV N L+D+Y KCG+L AR++F M +
Sbjct: 432 TSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCD 491
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
D VSW+++I GY Q EA LF RM S G+ + L L AC++V + +G +
Sbjct: 492 RDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQV 551
Query: 525 YRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
+ + + G+ S ++D+ ++ G + +A + M
Sbjct: 552 H-CLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSM 590
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 235/486 (48%), Gaps = 18/486 (3%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T++ ++S + +++ GR++H ++ + + +++MY KC L DA+ FD +
Sbjct: 162 TFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGI 221
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
N V WT + +G + +A+ ++ +M G P F ++I LG + R
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDAR 281
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS----WGSMIAAF 212
L + + ++A N +I+ + K + A F + + V S GS+++A
Sbjct: 282 LLFGEMPSPD----VVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAI 337
Query: 213 SKLG-YELEALCHFNEM---LHHGAYQPNEFIFGSVFSACSNF--ARILFNEIDSPDLAS 266
+ +L + H + L Y + + S++S C A +F ++ +
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLV--SMYSKCEKMEAAAKVFEALEERNDVL 395
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WNA+I G A + +++ M LF +M+ D T SLL C L G Q HS II
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIII 455
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
K N+ V NA++ MYAKC L +A +F+ + + D+VSWN+II +Q E F
Sbjct: 456 KKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMC-DRDNVSWNTIIGGYVQDENESEAF 514
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
LF RM + I D + AC + L Q+HC K GL + + L+D+Y
Sbjct: 515 DLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMY 574
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KCG + ARK+F+ M VVS ++LI GY+Q +EA+ LF M + GV+P+ +T
Sbjct: 575 SKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTKGVNPSEITFA 633
Query: 507 GVLTAC 512
++ AC
Sbjct: 634 TIVEAC 639
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 115/213 (53%), Gaps = 2/213 (0%)
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
L L G VHS + +G DS + NAI+ +YAKC+ + A F L K D +WNS+
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLEK--DVTAWNSM 131
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
++ Q ++ R F + + I P+ TF+ V+ A+ ++E Q+HC + K GL
Sbjct: 132 LSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGL 191
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
+ + L+D+Y KC LG A+++F+ + +P+ V W+ L GY + G +EA+ +F R
Sbjct: 192 ERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFER 251
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
MR G P+ + V V+ +G +++ L+
Sbjct: 252 MRGEGHRPDHLAFVTVINTYISLGKLKDARLLF 284
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 197/414 (47%), Gaps = 20/414 (4%)
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
NA++ +Y K ++ A F+ + KDVT+W SM++ +S +G + L F + + +
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIF 157
Query: 235 QPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAM-SLFSE---M 290
PN+F F V S + + F + + G+ +S A+ ++++ +
Sbjct: 158 -PNKFTFSIVLSTSARETNVEFGR-----QIHCSMIKMGLERNSYCGGALVDMYAKCDRL 211
Query: 291 RDRELLPDGLTVHSLLC-ACIGRLTLYQGMQVHSYII--KMGFDSNVPVCNAILTM---Y 344
D + + DG+ + +C C+ + G+ + I+ +M + + P A +T+ Y
Sbjct: 212 GDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTY 271
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
L +A L+F E+ + D V+WN +I+ + F M S +K T
Sbjct: 272 ISLGKLKDARLLFGEM-PSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTL 330
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
V+ A +A+L++ +H K GLA +++V + L+ +Y KC + +A K+F +E
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
+ V W+++I GYA G + ++LF M+S G + + T +L+ C+ +E G
Sbjct: 391 RNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQF 450
Query: 525 YRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ I+ + + + +VD+ A+ G + +A M CD D V W +++
Sbjct: 451 HSIIIKK-KLTKNLFVGNALVDMYAKCGALEDARQIFEHM-CDRDNVSWNTIIG 502
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 137/297 (46%), Gaps = 44/297 (14%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + Y EAL Y +++ + + +T+ ++ CS L SL+ GR +H I
Sbjct: 704 MSGHSQNGFYEEALKFYKEMRHDGALPDQ-ATFVTVLRVCSVLSSLREGRAIHSLIFHLA 762
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-NVVSWTAMIAGCSQNYQENDAIKLY 124
D + N +++MY KCG ++ + FD+M +R NVVSW ++I G ++N DA+K++
Sbjct: 763 HDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIF 822
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
M QS +MP + TF ++ ACS G V GR++ +I ++G
Sbjct: 823 DSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMI-GQYG---------------- 865
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
++AR V M+ + GY EA ++ + +P+ ++ S+
Sbjct: 866 ---IEAR----------VDHVACMVDLLGRWGYLQEA----DDFIEAQNLKPDARLWSSL 908
Query: 245 FSACSNFARILFNEIDS-------PDLASWNALIAGV-ASHSNANEAMSLFSEMRDR 293
AC + EI + P +S L++ + AS EA +L MRDR
Sbjct: 909 LGACRIHGDDMRGEIAAERLIELEPQNSSAYVLLSNIYASQGRWEEANALRKAMRDR 965
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 182/594 (30%), Positives = 286/594 (48%), Gaps = 51/594 (8%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLS---------KCQPDVVLQNHILNMYGKC 83
I T ++ AC+ L +G+ VH + + S + D L + ++ MY KC
Sbjct: 297 ISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKC 356
Query: 84 GSLEDARMGFDKMPQR-NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI 142
G + AR FD MP + NV W ++ G ++ + +++ L+ QM + G+ P + +
Sbjct: 357 GDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCL 416
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
+K + L G H +++K G+ NALI+ Y K + I +A VF + +D
Sbjct: 417 LKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDT 476
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHG----------------------------AY 234
SW S+I+ + G EA+ F M G Y
Sbjct: 477 ISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGY 536
Query: 235 QPNEFIFGS---------VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEA 283
+ G ++S CS++ +F + ++ SW A+I ++
Sbjct: 537 SVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKV 596
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
L EM + PD V S+L G +L QG VH Y I+ G + +PV NA++ M
Sbjct: 597 AGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEM 656
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
Y C + A LVF + N D +SWN++I ++N A E F LFS ML Q KP+ +T
Sbjct: 657 YVNCRNMEEARLVFDHV-TNKDIISWNTLIGGYSRNNFANESFSLFSDMLL-QFKPNTVT 714
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
++ A A ++SLE ++H Y + G D + N L+D+Y+KCG+L AR LF+ +
Sbjct: 715 MTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLT 774
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
+++SW+ +I GY GCG +A+ LF +MR GV P+ + +L AC H GL EG
Sbjct: 775 KKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWK 834
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ M EY I P +H +C+VDLL+ G + EA +FI M + D +W SLL
Sbjct: 835 FFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLL 888
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 158/602 (26%), Positives = 275/602 (45%), Gaps = 71/602 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV---VLQNHILNMYGKCGSLEDARMGF 93
+Y ++ C RSL+ R+ H L+ + VL ++ Y KCG L ARM F
Sbjct: 96 SYCAVVQLCGEERSLEAARRAH--ALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVF 153
Query: 94 DKMPQR--NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
D+MP R +V WT++++ ++ + + L+ QM GV P ++K + LGS
Sbjct: 154 DEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGS 213
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ G +H + K G NALIA+Y++ + DA VF + +D SW S I+
Sbjct: 214 ITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISG 273
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
+ G+ A+ F++M G + + SV AC+
Sbjct: 274 YFSNGWHDRAVDLFSKMWSEGTEISSVTVL-SVLPACAELGFELVGKVVHGYSMKSGLLW 332
Query: 252 --------------ARILFNEIDSPDLAS----------------WNALIAGVASHSNAN 281
++++F + D+ S WN ++ G A +
Sbjct: 333 DLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFE 392
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLC--ACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCN 338
E++ LF +M + + PD H+L C CI L+ + G+ H Y++K+GF + VCN
Sbjct: 393 ESLLLFEQMHELGITPD---EHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCN 449
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
A+++ YAK +++ NA+LVF + + D++SWNS+I+ C + E LF RM +
Sbjct: 450 ALISFYAKSNMIDNAVLVFDRM-PHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHE 508
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
D T V+ ACA+ + +H Y KTGL + + N L+D+Y C S ++
Sbjct: 509 LDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQI 568
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
F M +VVSW+++I Y + G D+ L M G+ P++ + VL + +
Sbjct: 569 FRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESL 628
Query: 519 EEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
++G +H Y I ++P + ++++ + EA + + + DI+ W +L
Sbjct: 629 KQGKSVHGYAIRNGMEKLLPV---ANALMEMYVNCRNMEEARLVFDHVT-NKDIISWNTL 684
Query: 577 LA 578
+
Sbjct: 685 IG 686
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 122/509 (23%), Positives = 214/509 (42%), Gaps = 59/509 (11%)
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL--IAQNALIAMYT 182
+++L S G ++ ++++ C S+ R+ HA ++++ G + + L+ Y
Sbjct: 83 LRLLGSDGGVGVRSYCAVVQLCGEERSLEAARRAHA-LVRAGTGGIIGSVLGKRLVLAYL 141
Query: 183 KFDRILDARNVFSGIARK--DVTSWGSMIAAFSKLGYELEALCHFNEM------------ 228
K + AR VF + + DV W S+++A++K G E + F +M
Sbjct: 142 KCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAV 201
Query: 229 -------LHHGAYQPNEFIFG------------------SVFSACS--NFARILFNEIDS 261
G+ E I G +++S C A +F+ + +
Sbjct: 202 SCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHA 261
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
D SWN+ I+G S+ + A+ LFS+M +TV S+L AC G V
Sbjct: 262 RDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVV 321
Query: 322 HSYIIKMGFDSNVP---------VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
H Y +K G ++ + + ++ MY KC + +A VF + + WN I
Sbjct: 322 HGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLI 381
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
+ + + EE LF +M I PD + ++ ++ H Y+ K G
Sbjct: 382 MGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGF 441
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
V N L+ Y K + +A +F+ M + D +SW+S+I G G EA++LF R
Sbjct: 442 GTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVR 501
Query: 493 MRSLGVSPNLVTLVGVLTAC--SHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
M G + TL+ VL AC SH V +H Y + + G+I + ++D+ +
Sbjct: 502 MWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSV---KTGLIGETSLANALLDMYSN 558
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
H MA ++V W +++ S
Sbjct: 559 CSDWHSTNQIFRNMA-QKNVVSWTAMITS 586
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 136/289 (47%), Gaps = 17/289 (5%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+P +A ++ + SL+ G+ VH + + + + + + N ++ MY C ++E+AR
Sbjct: 608 IKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEAR 667
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ FD + ++++SW +I G S+N N++ L+ ML P T I+ A + +
Sbjct: 668 LVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASIS 726
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
S+ GR++HA+ ++ NAL+ MY K +L AR +F + +K++ SW MIA
Sbjct: 727 SLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIA 786
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS---- 261
+ G +A+ F +M G +P+ F ++ AC + FN +
Sbjct: 787 GYGMHGCGKDAVALFEQMRGSGV-EPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKI 845
Query: 262 -PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
P L + ++ ++ N EA M + PD SLL C
Sbjct: 846 EPKLKHYTCIVDLLSHTGNLKEAFEFIESM---PIEPDSSIWVSLLHGC 891
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 85/151 (56%), Gaps = 8/151 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAG--LISACSSLRSLQLGRKVHDH 60
N + + N NE+ + ++ ++ +P+T ++ A +S+ SL+ GR++H +
Sbjct: 682 NTLIGGYSRNNFANESFSLF----SDMLLQFKPNTVTMTCILPAVASISSLERGREIHAY 737
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
L D N +++MY KCG+L AR+ FD++ ++N++SWT MIAG + DA
Sbjct: 738 ALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDA 797
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKAC--SGL 149
+ L+ QM SGV P +F +I+ AC SGL
Sbjct: 798 VALFEQMRGSGVEPDTASFSAILYACCHSGL 828
>gi|356518523|ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Glycine max]
Length = 686
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 178/605 (29%), Positives = 293/605 (48%), Gaps = 73/605 (12%)
Query: 45 CSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSW 104
C ++++ + +H I+ + L N I+++Y KC +DAR FD+MP RN+VS+
Sbjct: 13 CGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRNIVSF 72
Query: 105 TAMIAGCSQNYQENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI 163
T M++ + + + ++A+ LY ML+S V P QF + +++KAC +G V LG +H HV
Sbjct: 73 TTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQHVS 132
Query: 164 KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALC 223
++ + NAL+ MY K ++DA+ VF I K+ TSW ++I +K G +A
Sbjct: 133 EARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRDAFN 192
Query: 224 HFNE-----------------------------MLHHGAYQPNEFIFGSVFSACSNFARI 254
F++ M+H + + F F AC +
Sbjct: 193 LFDQMPEPDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFPCALKACGLLGEL 252
Query: 255 ---------------------------------LFNEI------DSP---DLASWNALIA 272
L +E +SP LA WN++++
Sbjct: 253 TMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESLAVWNSMLS 312
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G ++ + A+ + + M D T L CI L QVH II G++
Sbjct: 313 GYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIITRGYEL 372
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
+ V + ++ +YAK + +AL +F+ L N D V+W+S+I C + +F LF M
Sbjct: 373 DHVVGSILIDLYAKQGNINSALRLFERL-PNKDVVAWSSLIVGCARLGLGTLVFSLFMDM 431
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
+ ++ DH + V+ + +ASL+ Q+H + K G + + L D+Y KCG +
Sbjct: 432 VHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESERVITTALTDMYAKCGEI 491
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
A LF+ + D +SW+ +I+G AQ G D+A+ + +M G PN +T++GVLTAC
Sbjct: 492 EDALALFDCLYEIDTMSWTGIIVGCAQNGRADKAISILHKMIESGTKPNKITILGVLTAC 551
Query: 513 SHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
H GLVEE +++ +E E+G+ P EH +C+VD+ A+AG EA + IN M D +
Sbjct: 552 RHAGLVEEAWTIFKSIETEHGLTPCPEHYNCMVDIFAKAGRFKEARNLINDMPFKPDKTI 611
Query: 573 WKSLL 577
W SLL
Sbjct: 612 WCSLL 616
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 149/545 (27%), Positives = 239/545 (43%), Gaps = 80/545 (14%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VS+ +EAL Y+ + ++ Y+ ++ AC + ++LG VH H+ ++
Sbjct: 76 VSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQHVSEAR 135
Query: 66 CQPDVVLQNHILNMYGKCGSLEDAR------------------MG-------------FD 94
+ D VL N +L+MY KCGSL DA+ +G FD
Sbjct: 136 LEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRDAFNLFD 195
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+MP+ ++VSW ++IAG + N + A++ M G+ FTF +KAC LG + +
Sbjct: 196 QMPEPDLVSWNSIIAGLADNASPH-ALQFLSMMHGKGLKLDAFTFPCALKACGLLGELTM 254
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF---SGIARKDVTSWGSMIAA 211
GRQ+H +IKS ++LI MY+ + +A +F S +A + + W SM++
Sbjct: 255 GRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLA-ESLAVWNSMLSG 313
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------------- 254
+ G AL M HH Q + + F C F +
Sbjct: 314 YVANGDWWRALGMIACM-HHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIITRGYEL 372
Query: 255 -----------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
LF + + D+ +W++LI G A SLF +M
Sbjct: 373 DHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLGTLVFSLFMDMV 432
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+L D + +L +L G Q+HS+ +K G++S + A+ MYAKC +
Sbjct: 433 HLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESERVITTALTDMYAKCGEIE 492
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+AL +F L D++SW II C Q+ +A++ + +M+ S KP+ IT V+ AC
Sbjct: 493 DALALFDCL-YEIDTMSWTGIIVGCAQNGRADKAISILHKMIESGTKPNKITILGVLTAC 551
Query: 412 AKMASLEMVTQLHCYI-TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVS 469
+E + I T+ GL N ++DI+ K G AR L N M PD
Sbjct: 552 RHAGLVEEAWTIFKSIETEHGLTPCPEHYNCMVDIFAKAGRFKEARNLINDMPFKPDKTI 611
Query: 470 WSSLI 474
W SL+
Sbjct: 612 WCSLL 616
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 227/510 (44%), Gaps = 81/510 (15%)
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
++ C ++ + LH+ +IK +H+ N++I++Y K R DAR +F + +++
Sbjct: 10 LRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRNI 69
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------- 251
S+ +M++AF+ G EAL +N ML QPN+F++ +V AC
Sbjct: 70 VSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQ 129
Query: 252 -----------------------------ARILFNEIDSPDLASWNALIAGVASHSNANE 282
A+ +F+EI + SWN LI G A +
Sbjct: 130 HVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRD 189
Query: 283 AMSLFSEMRDREL---------LPDGLTVHSL-----------------------LCACI 310
A +LF +M + +L L D + H+L C +
Sbjct: 190 AFNLFDQMPEPDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFPCALKACGLL 249
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS-W 369
G LT+ G Q+H IIK G + + ++++ MY+ C +L A+ +F + A+S++ W
Sbjct: 250 GELTM--GRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESLAVW 307
Query: 370 NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
NS+++ + + + + M S + D TF+ + C +L + +Q+H I
Sbjct: 308 NSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIIT 367
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
G D V + L+D+Y K G++ SA +LF + N DVV+WSSLI+G A+ G G L
Sbjct: 368 RGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLGTLVFSL 427
Query: 490 FTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLA 549
F M L + + L VL S + ++ G ++ + G R + + D+ A
Sbjct: 428 FMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKK-GYESERVITTALTDMYA 486
Query: 550 RAGCVHEAEDFINQMAC--DADIVVWKSLL 577
+ G E ED + C + D + W ++
Sbjct: 487 KCG---EIEDALALFDCLYEIDTMSWTGII 513
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 136/283 (48%), Gaps = 14/283 (4%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T++ + C +L+L +VH I+ + D V+ + ++++Y K G++ A F+++
Sbjct: 341 TFSIALKVCIYFDNLRLASQVHGLIITRGYELDHVVGSILIDLYAKQGNINSALRLFERL 400
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P ++VV+W+++I GC++ L++ M+ + F ++K S L S+ G+
Sbjct: 401 PNKDVVAWSSLIVGCARLGLGTLVFSLFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGK 460
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H+ +K + S + AL MY K I DA +F + D SW +I ++ G
Sbjct: 461 QIHSFCLKKGYESERVITTALTDMYAKCGEIEDALALFDCLYEIDTMSWTGIIVGCAQNG 520
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-----ARILFNEID-----SPDLAS 266
+A+ ++M+ G +PN+ V +AC + A +F I+ +P
Sbjct: 521 RADKAISILHKMIESGT-KPNKITILGVLTACRHAGLVEEAWTIFKSIETEHGLTPCPEH 579
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+N ++ A EA +L ++M + PD SLL AC
Sbjct: 580 YNCMVDIFAKAGRFKEARNLINDMPFK---PDKTIWCSLLDAC 619
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 157/389 (40%), Gaps = 44/389 (11%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+++ T+ + AC L L +GR++H I+ S + + +++MY C L++A
Sbjct: 232 LKLDAFTFPCALKACGLLGELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAM 291
Query: 91 MGFDKMPQ--RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
FDK ++ W +M++G N A+ + M SG +TF +K C
Sbjct: 292 KIFDKNSPLAESLAVWNSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIY 351
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
++ L Q+H +I + + + LI +Y K I A +F + KDV +W S+
Sbjct: 352 FDNLRLASQVHGLIITRGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSL 411
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------- 254
I ++LG F +M+H + + F+ V S+ A +
Sbjct: 412 IVGCARLGLGTLVFSLFMDMVHLD-LEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKG 470
Query: 255 --------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
LF+ + D SW +I G A + A++A+S+
Sbjct: 471 YESERVITTALTDMYAKCGEIEDALALFDCLYEIDTMSWTGIIVGCAQNGRADKAISILH 530
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI-IKMGFDSNVPVCNAILTMYAKC 347
+M + P+ +T+ +L AC + + + I + G N ++ ++AK
Sbjct: 531 KMIESGTKPNKITILGVLTACRHAGLVEEAWTIFKSIETEHGLTPCPEHYNCMVDIFAKA 590
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAAC 376
A + ++ D W S++ AC
Sbjct: 591 GRFKEARNLINDMPFKPDKTIWCSLLDAC 619
>gi|255547019|ref|XP_002514567.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546171|gb|EEF47673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 515
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 175/528 (33%), Positives = 262/528 (49%), Gaps = 64/528 (12%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+ C R+ +K+H HI+ + P+ L N+++N YGK G++ AR FD MPQRN
Sbjct: 14 LLKFCCETRNQSQAKKLHCHIIKTLANPEPFLYNNLMNAYGKLGNIAYARHLFDGMPQRN 73
Query: 101 V-------------------------------VSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
VSW +++G + +DA+K Y M++
Sbjct: 74 SFSWNTILSAYSKSGHLPKMKEIFSLMPNRDGVSWNTILSGYASYGSVSDAVKAYNSMMR 133
Query: 130 SGVMP-GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
GV + TF +++ S V LGRQ+H H++K G ++ + L+ MY K +
Sbjct: 134 DGVFNLNRITFSTMLILASSRELVDLGRQIHGHIMKFGFGGYVFVGSPLVDMYAKTGLVY 193
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
+A+ VF + ++V +MI K G M+
Sbjct: 194 EAKKVFDEMPDRNVVMHNTMITGLLKFG-----------MMED----------------- 225
Query: 249 SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCA 308
++ LF+ + D SW +I G+ + EA+ F +MR + D T S+L A
Sbjct: 226 ---SKRLFHGMKERDNISWTTMITGLVQNGLEEEAIDFFRQMRLDGIGMDQYTFGSVLTA 282
Query: 309 CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS 368
C G L +G QVH++II+ NV V +A++ MY KC +L A VFK + K + VS
Sbjct: 283 CGGLTALREGKQVHAFIIRSDCTDNVFVGSALVDMYCKCKILRYAEAVFKRM-KYKNVVS 341
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
W +I+ Q+ +EE ++F M + I+PD T V+ +CA +ASLE Q HC
Sbjct: 342 WTAILVGYGQNGFSEEAVKVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCRAL 401
Query: 429 KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
+GL + V N L+ +Y KCGS+ + +LFN M D VSW++LI GYAQFG E ++
Sbjct: 402 VSGLISSITVSNALVTLYGKCGSIEDSDRLFNEMNFRDEVSWTALISGYAQFGKARETIE 461
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
LF RM + G+ P+ VT +GVL ACS GLV G + M EYGIIP
Sbjct: 462 LFERMLAHGLKPDAVTFIGVLLACSRAGLVARGQQFFDSMLEEYGIIP 509
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 173/378 (45%), Gaps = 72/378 (19%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S ++A+ AY+ + + T++ ++ SS + LGR++H HI+
Sbjct: 109 NTILSGYASYGSVSDAVKAYNSMMRDGVFNLNRITFSTMLILASSRELVDLGRQIHGHIM 168
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVV-------------------- 102
V + + +++MY K G + +A+ FD+MP RNVV
Sbjct: 169 KFGFGGYVFVGSPLVDMYAKTGLVYEAKKVFDEMPDRNVVMHNTMITGLLKFGMMEDSKR 228
Query: 103 -----------SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
SWT MI G QN E +AI + QM G+ Q+TFGS++ AC GL +
Sbjct: 229 LFHGMKERDNISWTTMITGLVQNGLEEEAIDFFRQMRLDGIGMDQYTFGSVLTACGGLTA 288
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ G+Q+HA +I+S+ ++ +AL+ MY K + A VF + K+V SW +++
Sbjct: 289 LREGKQVHAFIIRSDCTDNVFVGSALVDMYCKCKILRYAEAVFKRMKYKNVVSWTAILVG 348
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------------- 254
+ + G+ EA+ F +M +G +P++F GSV S+C+N A +
Sbjct: 349 YGQNGFSEEAVKVFCDMQRNGI-EPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLIS 407
Query: 255 -----------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
LFNE++ D SW ALI+G A A E + LF M
Sbjct: 408 SITVSNALVTLYGKCGSIEDSDRLFNEMNFRDEVSWTALISGYAQFGKARETIELFERML 467
Query: 292 DRELLPDGLTVHSLLCAC 309
L PD +T +L AC
Sbjct: 468 AHGLKPDAVTFIGVLLAC 485
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 134/246 (54%), Gaps = 6/246 (2%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNT--NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILL 63
++ L + L EA+ DF + I + T+ +++AC L +L+ G++VH I+
Sbjct: 245 ITGLVQNGLEEEAI---DFFRQMRLDGIGMDQYTFGSVLTACGGLTALREGKQVHAFIIR 301
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
S C +V + + +++MY KC L A F +M +NVVSWTA++ G QN +A+K+
Sbjct: 302 SDCTDNVFVGSALVDMYCKCKILRYAEAVFKRMKYKNVVSWTAILVGYGQNGFSEEAVKV 361
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ M ++G+ P FT GS+I +C+ L S+ G Q H + S S + NAL+ +Y K
Sbjct: 362 FCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISSITVSNALVTLYGK 421
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
I D+ +F+ + +D SW ++I+ +++ G E + F ML HG +P+ F
Sbjct: 422 CGSIEDSDRLFNEMNFRDEVSWTALISGYAQFGKARETIELFERMLAHG-LKPDAVTFIG 480
Query: 244 VFSACS 249
V ACS
Sbjct: 481 VLLACS 486
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN ++E V I T +IS+C++L SL+ G + H L+S +
Sbjct: 351 QNGFSEEAVKVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISSIT 410
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ N ++ +YGKCGS+ED+ F++M R+ VSWTA+I+G +Q + + I+L+ +ML G
Sbjct: 411 VSNALVTLYGKCGSIEDSDRLFNEMNFRDEVSWTALISGYAQFGKARETIELFERMLAHG 470
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG 168
+ P TF ++ ACS G V G+Q +++ E+G
Sbjct: 471 LKPDAVTFIGVLLACSRAGLVARGQQFFDSMLE-EYG 506
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 104/205 (50%), Gaps = 10/205 (4%)
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
C NQ++ +L ++ + P+ +N++M A K+ ++ L + + +
Sbjct: 19 CETRNQSQAK-KLHCHIIKTLANPEPFLYNNLMNAYGKLGNIAYARHLFDGMPQR----N 73
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
F N ++ Y K G L +++F+ M N D VSW++++ GYA +G +A+K + M
Sbjct: 74 SFSWNTILSAYSKSGHLPKMKEIFSLMPNRDGVSWNTILSGYASYGSVSDAVKAYNSMMR 133
Query: 496 LGV-SPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGC 553
GV + N +T +L S LV+ G ++ IM+ +G S +VD+ A+ G
Sbjct: 134 DGVFNLNRITFSTMLILASSRELVDLGRQIHGHIMK--FGFGGYVFVGSPLVDMYAKTGL 191
Query: 554 VHEAEDFINQMACDADIVVWKSLLA 578
V+EA+ ++M D ++V+ +++
Sbjct: 192 VYEAKKVFDEMP-DRNVVMHNTMIT 215
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 42/232 (18%)
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
N IL+ Y+K L +F L N D VSWN+I++ + + + ++ M+ +
Sbjct: 78 NTILSAYSKSGHLPKMKEIF-SLMPNRDGVSWNTILSGYASYGSVSDAVKAYNSMMRDGV 136
Query: 398 -KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
+ ITF+ ++ + +++ Q+H +I K G VFV + L+D+Y K G
Sbjct: 137 FNLNRITFSTMLILASSRELVDLGRQIHGHIMKFGFGGYVFVGSPLVDMYAKTG------ 190
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
L Y EA K+F M V + + G+L G
Sbjct: 191 ------------------LVY-------EAKKVFDEMPDRNVVMHNTMITGLL----KFG 221
Query: 517 LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
++E+ L+ M+ I T ++ L + G EA DF QM D
Sbjct: 222 MMEDSKRLFHGMKERDNISWT-----TMITGLVQNGLEEEAIDFFRQMRLDG 268
>gi|242033481|ref|XP_002464135.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
gi|241917989|gb|EER91133.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
Length = 576
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 174/548 (31%), Positives = 275/548 (50%), Gaps = 60/548 (10%)
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
L+ HI G L AR FD++P + ++ A+I S + AI LY ML
Sbjct: 40 LEQHIAR-----GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFR 94
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
V P ++TF ++KACS L +C GR +HAH + L ALI +Y + R A
Sbjct: 95 VPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAA 154
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF---------- 241
NVF+ + +DV +W +M+A ++ G A+ H +M G +PN
Sbjct: 155 NVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQH 214
Query: 242 GSVFSACSNFARIL---------------------------------FNEIDSPDLASWN 268
G++F S A L F+ + + +W+
Sbjct: 215 GALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWS 274
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGL------TVHSLLCACIGRLTLYQGMQVH 322
ALI G EA +LF +M L +G+ +V S L C L G Q+H
Sbjct: 275 ALIGGFVLCDRMTEAFNLFKDM-----LVEGMCFLSATSVASALRVCASLADLRMGTQLH 329
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ + K G +++ N++L+MYAK ++ A ++F E+ D++S+ ++++ +Q+ +A
Sbjct: 330 ALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIK-DTISYGALLSGYVQNGKA 388
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
EE F +F +M A ++PD T ++ AC+ +A+L+ H + GLA + + N L
Sbjct: 389 EEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSL 448
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y KCG + +R++F+ M D+VSW+++I GY G G EA LF M++ G P+
Sbjct: 449 IDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDD 508
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
VT + ++ ACSH GLV EG H + M ++YGI+P EH C+VDLLAR G + EA FI
Sbjct: 509 VTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQ 568
Query: 563 QMACDADI 570
M AD+
Sbjct: 569 SMPLKADV 576
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 196/438 (44%), Gaps = 47/438 (10%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
A D ++ R+ P+ T+ ++ ACS+L L GR +H H D+ + +++
Sbjct: 83 AIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALID 142
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSGVMPGQF 137
+Y +C A F KMP R+VV+W AM+AG + + + AI + M + G+ P
Sbjct: 143 LYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNAS 202
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKS---EHGSHLIAQNALIAMYTKFDRILDARNVF 194
T S++ + G++ G +HA+ +++ ++ ++ AL+ MY K ++ A VF
Sbjct: 203 TLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVF 262
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS----- 249
G+ ++ +W ++I F EA F +ML G + S C+
Sbjct: 263 HGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADL 322
Query: 250 -----------------------------------NFARILFNEIDSPDLASWNALIAGV 274
N A +LF+EI D S+ AL++G
Sbjct: 323 RMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGY 382
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+ A EA +F +M+ + PD T+ SL+ AC L G H +I G
Sbjct: 383 VQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALET 442
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
+CN+++ MYAKC + + VF ++ D VSWN++IA H +E LF M
Sbjct: 443 SICNSLIDMYAKCGRIDLSRQVFDKMPAR-DIVSWNTMIAGYGIHGLGKEATTLFLSMKN 501
Query: 395 SQIKPDHITFNDVMGACA 412
+PD +TF ++ AC+
Sbjct: 502 QGFEPDDVTFICLIAACS 519
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 114/215 (53%), Gaps = 1/215 (0%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
++ A + C+SL L++G ++H + S D+ N +L+MY K G + +A M FD+
Sbjct: 307 TSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDE 366
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ ++ +S+ A+++G QN + +A ++ +M V P T S+I ACS L ++ G
Sbjct: 367 IAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHG 426
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R H VI N+LI MY K RI +R VF + +D+ SW +MIA +
Sbjct: 427 RCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIH 486
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
G EA F M + G ++P++ F + +ACS+
Sbjct: 487 GLGKEATTLFLSMKNQG-FEPDDVTFICLIAACSH 520
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 156/333 (46%), Gaps = 8/333 (2%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
AR +F+ I +PD ++NALI + + A+ L+ M + P+ T +L AC
Sbjct: 51 LARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACS 110
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
L G +H++ +G +++ V A++ +Y +C+ A VF ++ D V+WN
Sbjct: 111 ALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMR-DVVAWN 169
Query: 371 SIIAACLQHNQAEE-LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
+++A H + L ++P+ T ++ A+ +L T +H Y +
Sbjct: 170 AMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLR 229
Query: 430 TGLAFD---VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
L + V + L+D+Y KC L A ++F+ M + V+WS+LI G+ EA
Sbjct: 230 AYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEA 289
Query: 487 LKLFTRMRSLGVS-PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
LF M G+ + ++ L C+ + + G L+ ++ GI + ++
Sbjct: 290 FNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKS-GIHADLTAGNSLL 348
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ A+AG ++EA +++A D + + +LL+
Sbjct: 349 SMYAKAGLINEATMLFDEIAIK-DTISYGALLS 380
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 70/128 (54%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
N++ +T LI ACS L +LQ GR H +++ + + N +++MY KCG ++ +
Sbjct: 402 NVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLS 461
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FDKMP R++VSW MIAG + +A L++ M G P TF +I ACS
Sbjct: 462 RQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHS 521
Query: 150 GSVCLGRQ 157
G V G+
Sbjct: 522 GLVTEGKH 529
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
++ +I G L AR++F+ + PD ++++LI Y+ G A+ L+ M V PN
Sbjct: 40 LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
T VL ACS + + G ++ G+ + ++DL R A +
Sbjct: 100 YTFPFVLKACSALADLCAGRTIH-AHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFA 158
Query: 563 QMACDADIVVWKSLLA 578
+M D+V W ++LA
Sbjct: 159 KMPMR-DVVAWNAMLA 173
>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
Length = 1008
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/600 (28%), Positives = 302/600 (50%), Gaps = 46/600 (7%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
A+ Q ++P+ T+ +I C + + G+ +H H++ + + + +L+
Sbjct: 341 AFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLS 400
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MY K G L A F +MP+RN++SW +MI+G N ++ + M G P +
Sbjct: 401 MYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAIS 460
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
+I+ ACS L ++ LG+ HA + E S+L NAL+A Y+ ++ + +F +
Sbjct: 461 IVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMP 520
Query: 199 RKDVTSWGSMI-------------AAFSKLGYE-----------LEALCHFNE-----ML 229
++ SW ++I A K+ E + +C E M
Sbjct: 521 LRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMT 580
Query: 230 HHGAYQPNEFI--------FGSVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSN 279
HG F S++ C N + LF + + SWNALI G H
Sbjct: 581 LHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYL 640
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
NE M+ F +M P+ +T+ +LL +C TL QG +H++ ++ G P+ +
Sbjct: 641 QNEVMASFCQMIREGQKPNYVTLLNLLPSC---RTLLQGKSIHAFAVRTGVIVETPIITS 697
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
+++MYA+ + N+ + E+G D WN+I++ +Q A+E F +L ++++P
Sbjct: 698 LISMYARFENI-NSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEP 756
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D+ITF ++ AC +++SL + + Y+ + G + + N L+D++ +CG++ A+K+F
Sbjct: 757 DYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIF 816
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ + D VSWS++I GY G + AL L ++MR G+ P+ +T VL+ACSH G ++
Sbjct: 817 EGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFID 876
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+G ++ M E G+ EH +C+VDLL R G ++EA DF+ ++ C + + +SLL +
Sbjct: 877 QGWMIFNSMVEE-GVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLGA 935
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 163/623 (26%), Positives = 301/623 (48%), Gaps = 62/623 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIR----PS---TYAGLISACSSLRSLQLGR 55
N + LC L+ + L Y ++ R PS T+ +I AC++L ++ +
Sbjct: 124 NLMIRRLCDHGLFEDVLCVY--------LKCRVLGCPSDDFTFPFVIKACTALGAVWIAE 175
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
VH +L + + ++V+Q +++ Y K G + AR+ DK+ Q ++V+W A+I+G S N
Sbjct: 176 GVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNG 235
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+ + ++ Q+ + G+ P TF SII C+ + + +G+ +H V+KS S
Sbjct: 236 FDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTP 295
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
ALI+MY + AR++F A K+V W SMI+A+++ EA F +ML Q
Sbjct: 296 ALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQML-KANMQ 354
Query: 236 PNEFIFGSVFSACSNFAR----------------------------------------IL 255
PN F S+ C N A +
Sbjct: 355 PNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFI 414
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F ++ +L SWN++I+G + +M F +M+ PD +++ ++L AC +
Sbjct: 415 FYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAI 474
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
G H++ + FDSN+ + NA+L Y+ C L ++ +F+++ +++SWN++I+
Sbjct: 475 LLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLR-NAISWNTLISG 533
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
C+ + ++ L +M +++ D +T ++ C +L LH Y KTG A D
Sbjct: 534 CVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACD 593
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
V ++N L+ +Y CG + + + LF M +VSW++LI GY +E + F +M
Sbjct: 594 VSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIR 653
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
G PN VTL+ +L +C + L + +H + + G+I + ++ + AR ++
Sbjct: 654 EGQKPNYVTLLNLLPSCRTL-LQGKSIHAFAV---RTGVIVETPIITSLISMYARFENIN 709
Query: 556 EAEDFINQMACDADIVVWKSLLA 578
+ F+ +M DI +W ++++
Sbjct: 710 -SFIFLFEMGGKEDIALWNAIMS 731
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/602 (24%), Positives = 280/602 (46%), Gaps = 69/602 (11%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
N ++ ST+A +I C+ ++ L +G+ +H ++ S D L +++MY G+L
Sbjct: 248 NEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNL 307
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
AR FD ++NVV W +MI+ +QN + ++A K++ QML++ + P TF SII C
Sbjct: 308 FIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCC 367
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
+ G+ LHAHV+K S L AL++MY K + A +F + R+++ SW
Sbjct: 368 ENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWN 427
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------ 254
SMI+ + G ++ F +M G + P+ ++ SACS I
Sbjct: 428 SMISGYGHNGLWEASMDAFCDMQFEG-FDPDAISIVNILSACSKLEAILLGKAAHAFSFR 486
Query: 255 ----------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
LF ++ + SWN LI+G + + +A++L
Sbjct: 487 KEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVAL 546
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
+M+ ++ D +T+ S++ C L QGM +H Y IK GF +V + NA+++MY
Sbjct: 547 LHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFN 606
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
C + +F E+ VSWN++I H E+ F +M+ KP+++T +
Sbjct: 607 CGDINAGKFLF-EVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLN 665
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
++ +C +L +H + +TG+ + ++ L+ +Y + ++ S LF D
Sbjct: 666 LLPSC---RTLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKED 722
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG---------- 516
+ W++++ Y Q E++ F + V P+ +T + +++AC +
Sbjct: 723 IALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMA 782
Query: 517 -LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
++++G + ++ N ++DL AR G + A+ ++ D V W +
Sbjct: 783 YVIQKGFDKHIVISN------------ALIDLFARCGNISIAKKIFEGLS-SKDAVSWST 829
Query: 576 LL 577
++
Sbjct: 830 MI 831
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 132/554 (23%), Positives = 257/554 (46%), Gaps = 55/554 (9%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQ-LGRKVHDHILLSKCQPDVVLQN 74
N+ + N++N ++ +++ L C ++ +L+ LG + I+ + + V+
Sbjct: 40 NKQFIKNTSKHNSSNPKV--TSFLRLFDLCRNIENLKPLGSVL---IVRDLMRDEYVVAE 94
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
I++ + G+ E A F+ + + +V MI + D + +Y++ G
Sbjct: 95 FIISCF-HLGAPELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPS 153
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
FTF +IKAC+ LG+V + +H V+++ +L+ Q AL+ Y K R++ AR V
Sbjct: 154 DDFTFPFVIKACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVL 213
Query: 195 SGIARKDVTSWGSMIAAFSKLGYE---LEALCHFNEMLHHGAYQPNEFIFGSVFSACSN- 250
I++ D+ +W ++I+ +S G++ E L NEM +PN F S+ C+
Sbjct: 214 DKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEM----GLKPNVSTFASIIPLCTRM 269
Query: 251 ---------------------------------------FARILFNEIDSPDLASWNALI 271
AR LF+ ++ WN++I
Sbjct: 270 KCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMI 329
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
+ A + ++EA +F +M + P+ +T S++ C + G +H++++K D
Sbjct: 330 SAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLD 389
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
S + V A+L+MYAK L +A +F ++ + + +SWNS+I+ + E F
Sbjct: 390 SQLSVATALLSMYAKLGDLNSADFIFYQMPRR-NLLSWNSMISGYGHNGLWEASMDAFCD 448
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M PD I+ +++ AC+K+ ++ + H + + ++ + N L+ Y CG
Sbjct: 449 MQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGK 508
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
L S+ KLF M + +SW++LI G G +A+ L +M+ + +LVTL+ ++
Sbjct: 509 LSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPI 568
Query: 512 CSHVGLVEEGLHLY 525
C + +G+ L+
Sbjct: 569 CRVAENLIQGMTLH 582
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 171/387 (44%), Gaps = 44/387 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T +I C +L G +H + + + DV L N +++MY CG + + F+ M
Sbjct: 561 TLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVM 620
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P R++VSW A+I G +Y +N+ + + QM++ G P T +++ +C L G+
Sbjct: 621 PWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSCRTL---LQGK 677
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+HA +++ +LI+MY +F+ I +F ++D+ W ++++ + +
Sbjct: 678 SIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTK 737
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--------SN------------------ 250
E++ F E+L H +P+ F S+ SAC SN
Sbjct: 738 NAKESVTFFCELL-HARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVIS 796
Query: 251 --------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A+ +F + S D SW+ +I G H ++ A++L S+MR +
Sbjct: 797 NALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMK 856
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PDG+T S+L AC + QG + + +++ G + ++ + + L A
Sbjct: 857 PDGITYASVLSACSHGGFIDQGWMIFNSMVEEGVPRRMEHYACMVDLLGRTGQLNEAYDF 916
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAE 383
++L S++ AC+ H +
Sbjct: 917 VEKLPCKPSVSLLESLLGACIIHGNVK 943
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 165/351 (47%), Gaps = 5/351 (1%)
Query: 229 LHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
L Y EFI A F I+ P + N +I + H + + ++
Sbjct: 85 LMRDEYVVAEFIISCFHLGAPELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYL 144
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+ R D T ++ AC ++ VH +++ F+ N+ + A++ YAK
Sbjct: 145 KCRVLGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTG 204
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ A LV ++ + D V+WN++I+ + +E+F + ++ +KP+ TF ++
Sbjct: 205 RMVKARLVLDKISQ-PDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASII 263
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
C +M L++ +H ++ K+G + D F+ L+ +Y G+L AR LF+ +VV
Sbjct: 264 PLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVV 323
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RI 527
W+S+I YAQ EA K+F +M + PN+VT V ++ C + G L+ +
Sbjct: 324 IWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHV 383
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
M +Y + + ++ + A+ G ++ A DFI +++ W S+++
Sbjct: 384 M--KYRLDSQLSVATALLSMYAKLGDLNSA-DFIFYQMPRRNLLSWNSMIS 431
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 139/304 (45%), Gaps = 13/304 (4%)
Query: 34 RPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
+ Y L++ S R+L G+ +H + + + + +++MY + ++ F
Sbjct: 656 QKPNYVTLLNLLPSCRTLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLF 715
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
+ + ++ W A+++ Q +++ + ++L + V P TF S+I AC L S+
Sbjct: 716 EMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLN 775
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
L + A+VI+ H++ NALI ++ + I A+ +F G++ KD SW +MI +
Sbjct: 776 LSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYG 835
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDSPDLAS-- 266
G AL ++M G +P+ + SV SACS+ I +FN + +
Sbjct: 836 LHGDSEAALALLSQMRLSGM-KPDGITYASVLSACSHGGFIDQGWMIFNSMVEEGVPRRM 894
Query: 267 --WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
+ ++ + NEA ++ + P + SLL ACI + G ++ S
Sbjct: 895 EHYACMVDLLGRTGQLNEAYDFVEKLPCK---PSVSLLESLLGACIIHGNVKLGEKISSL 951
Query: 325 IIKM 328
+ ++
Sbjct: 952 LFEL 955
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 177/563 (31%), Positives = 281/563 (49%), Gaps = 51/563 (9%)
Query: 64 SKCQPDVVLQNHILNMYGKCG----SLEDARMGFDKM----PQRNVVSWTAMIAGCSQNY 115
S +PD V IL GK LE R K+ +V W ++ Q
Sbjct: 217 SGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAG 276
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+ +A+ + M++S V T+ I+ + L + LG+Q+H V++ + N
Sbjct: 277 EGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVAN 336
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
+ I MY K + AR +F + D+ SW ++I+ ++ G E +L F ++L G
Sbjct: 337 SAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLL- 395
Query: 236 PNEFIFGSVFSACSNF-----------------------------------------ARI 254
P++F SV ACS+ A +
Sbjct: 396 PDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAEL 455
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
LF+ D DLASWNA++ G N EA+ LFS M +R D +T + A +
Sbjct: 456 LFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVR 515
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
L QG Q+H+ +IKM F ++ V + IL MY KC + +A VF ++ + D V+W ++I+
Sbjct: 516 LQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQI-PSPDDVAWTTVIS 574
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
C+++ + E+ + +M + ++PD TF ++ AC+ + +LE Q+H I K AF
Sbjct: 575 GCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAF 634
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
D FVM L+D+Y KCG++ A LF M V W+++I+G AQ G +EAL F M+
Sbjct: 635 DPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMK 694
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCV 554
S GV+P+ VT +GVL+ACSH GL + + M+ YG+ P EH SC+VD L+RAG +
Sbjct: 695 SRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHI 754
Query: 555 HEAEDFINQMACDADIVVWKSLL 577
EAE ++ M +A ++++LL
Sbjct: 755 QEAEKVVSSMPFEASATMYRTLL 777
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 149/555 (26%), Positives = 254/555 (45%), Gaps = 36/555 (6%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ--RNVVSWTAMI 108
L LG++ H I+ S PD + N+++ MY KCGSL AR FD PQ R++V++ A++
Sbjct: 29 LILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAIL 88
Query: 109 AGCSQNYQEND------AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
A + + +D A ++ + QS ++ + T + K C GS L +
Sbjct: 89 AAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYA 148
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL 222
+K + AL+ +Y KF RI +AR +F + +DV W M+ A+ ++G E L
Sbjct: 149 VKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVL 208
Query: 223 CHFNEMLHHGAYQPN-------------EFIFGSVFSACSNFARILFNEIDSPDLASWNA 269
F+ H +P+ + +F +A LF D D+ WN
Sbjct: 209 GLFS-AFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNK 267
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
++ EA+ F +M + D LT +L L G Q+H +++ G
Sbjct: 268 TLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFG 327
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
+D V V N+ + MY K + A +F ++ K D +SWN++I+ C + E RLF
Sbjct: 328 WDQFVSVANSAINMYVKAGSVNYARRMFGQM-KEVDLISWNTVISGCARSGLEECSLRLF 386
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMV-TQLHCYITKTGLAFDVFVMNGLMDIYIK 448
+L S + PD T V+ AC+ + V Q+H K G+ D FV L+D+Y K
Sbjct: 387 IDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSK 446
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
G + A LF+ + D+ SW++++ G+ EAL+LF+ M G + +T
Sbjct: 447 GGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANA 506
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREH-----CSCVVDLLARAGCVHEAEDFINQ 563
A + +++G ++ + +I R H S ++D+ + G + A NQ
Sbjct: 507 AKAAGCLVRLQQGKQIHAV------VIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQ 560
Query: 564 MACDADIVVWKSLLA 578
+ D V W ++++
Sbjct: 561 IPSPDD-VAWTTVIS 574
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 146/543 (26%), Positives = 253/543 (46%), Gaps = 81/543 (14%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY ++S +SL L+LG+++H ++ V + N +NMY K GS+ AR F +M
Sbjct: 299 TYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQM 358
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL-GSVCLG 155
+ +++SW +I+GC+++ E +++L+I +L+SG++P QFT S+++ACS L S C+G
Sbjct: 359 KEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVG 418
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
RQ+H +K+ ALI +Y+K ++ +A +F D+ SW +M+ F+
Sbjct: 419 RQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVS 478
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------------- 249
EAL F+ ++H + ++ F + A
Sbjct: 479 DNYREALRLFS-LMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFV 537
Query: 250 --------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR +FN+I SPD +W +I+G + +A+ + +MR +
Sbjct: 538 ISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGV 597
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD T +L+ AC L QG Q+H+ I+K+ + V +++ MYAKC + +A
Sbjct: 598 QPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYG 657
Query: 356 VFKELGKNADSVS-WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F+ + N SV+ WN++I QH AEE F+ M + + PD +TF V+ AC
Sbjct: 658 LFRRM--NTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSAC--- 712
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+ +GL D + + S +K + P++ +S L+
Sbjct: 713 -------------SHSGLTSDAY------------KNFDSMQKTYGV--EPEIEHYSCLV 745
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
++ G EA K+ + M + TL L AC G E G R+ E + +
Sbjct: 746 DALSRAGHIQEAEKVVSSMPFEASATMYRTL---LNACRVQGDKETG---ERVAEKLFTM 799
Query: 535 IPT 537
P+
Sbjct: 800 DPS 802
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 145/557 (26%), Positives = 257/557 (46%), Gaps = 82/557 (14%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
Q DV + ++N+Y K + +AR+ FD+MP R+VV W M+ + ++ + L+
Sbjct: 154 QWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSA 213
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
+SG+ P C + ++ +G + T F+R
Sbjct: 214 FHRSGLRPD----------CVSVRTILMG----------------------VGKKTVFER 241
Query: 187 ILD-----ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH----------- 230
L+ A +F DVT W ++++ + G EA+ F +M+
Sbjct: 242 ELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYI 301
Query: 231 ------------------HGA---YQPNEFIFGS-------VFSACSNFARILFNEIDSP 262
HGA + ++F+ + V + N+AR +F ++
Sbjct: 302 VILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEV 361
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY-QGMQV 321
DL SWN +I+G A ++ LF ++ LLPD T+ S+L AC Y G QV
Sbjct: 362 DLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQV 421
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H+ +K G + V A++ +Y+K + A L+F D SWN+++ +
Sbjct: 422 HTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHN-QDGFDLASWNAMMHGFTVSDN 480
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
E RLFS M K D ITF + A + L+ Q+H + K +D+FV++G
Sbjct: 481 YREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISG 540
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
++D+Y+KCG + SARK+FN + +PD V+W+++I G + G ++AL + +MR GV P+
Sbjct: 541 ILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPD 600
Query: 502 LVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
T ++ ACS + +E+G ++ IM+ P + +VD+ A+ G + +A
Sbjct: 601 EYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGL 658
Query: 561 INQMACDADIVVWKSLL 577
+M + + +W +++
Sbjct: 659 FRRMNTRS-VALWNAMI 674
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 112/239 (46%), Gaps = 10/239 (4%)
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
LLP S+L I L G + H+ I+ G + + V N ++TMYAKC L +A
Sbjct: 12 LLPQWF---SILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSAR 68
Query: 355 LVFKELGK-NADSVSWNSIIAACLQ----HN--QAEELFRLFSRMLASQIKPDHITFNDV 407
+F + + D V++N+I+AA H+ + E F +F + S + T + +
Sbjct: 69 KLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPL 128
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
C S L Y K GL +DVFV L++IY K + AR LF+ M DV
Sbjct: 129 FKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDV 188
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
V W+ ++ Y + G GDE L LF+ G+ P+ V++ +L + E L R
Sbjct: 189 VLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVR 247
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 182/576 (31%), Positives = 271/576 (47%), Gaps = 69/576 (11%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
DV N ++ Y + DA F +MPQRN+V+WT MI+G + Q ++ M
Sbjct: 156 DVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMH 215
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
G P Q F S++ A +GL + + L V+K+ S ++ +++ +YT+ L
Sbjct: 216 HEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASAL 275
Query: 189 D-ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
D A F G+ ++ +W +MIAA S G A+ + + G
Sbjct: 276 DIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCG 335
Query: 248 CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP---------- 297
ARILF +I P + SWNA+I G + +EA LF M R +
Sbjct: 336 RITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQ 395
Query: 298 DGLTVHSL-----------------------LCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+G + +L C+ IG L G QVHS +K G N
Sbjct: 396 NGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIG--ALETGRQVHSLAVKAGCQFNS 453
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
VCNA+++MY KC + VF + + D+VSWNS IAA +Q+N E+ +F ML+
Sbjct: 454 YVCNALISMYGKCRNMEYVRQVFNRM-RVKDTVSWNSFIAALVQNNMLEDARHIFDNMLS 512
Query: 395 SQI-------------------------------KPDHITFNDVMGACAKMASLEMVTQL 423
+ KP+ ++ C + S ++ Q+
Sbjct: 513 RDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQI 572
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H K G+ ++ V N LM +Y KCG S K+F+ ME D+ +W++ I G AQ G G
Sbjct: 573 HTVAIKHGMDSELIVANALMSMYFKCGCADS-HKVFDSMEERDIFTWNTFITGCAQHGLG 631
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
EA+K++ M S+GV PN VT VG+L ACSH GLV+EG ++ M +YG+ P EH +C
Sbjct: 632 REAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYAC 691
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+VDLL R G V AE FI M + D V+W +LL +
Sbjct: 692 MVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGA 727
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 228/486 (46%), Gaps = 47/486 (9%)
Query: 54 GRKVHDHILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCS 112
GR IL + P VV N ++ Y + G +++A+ FD+MP RN +SW MIAG +
Sbjct: 335 GRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYA 394
Query: 113 QNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
QN + +A+ L + ++G++P + S ACS +G++ GRQ+H+ +K+ +
Sbjct: 395 QNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSY 454
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
NALI+MY K + R VF+ + KD SW S IAA + N ML
Sbjct: 455 VCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQ-----------NNMLED- 502
Query: 233 AYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
AR +F+ + S D+ SW +I+ A +EA+ F M
Sbjct: 503 -------------------ARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLH 543
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
P+ + LL C G + G Q+H+ IK G DS + V NA+++MY KC +
Sbjct: 544 EHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGC-AD 602
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
+ VF + + D +WN+ I C QH E +++ M + + P+ +TF ++ AC+
Sbjct: 603 SHKVFDSM-EERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACS 661
Query: 413 KMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARK-LFNFMENPDVVSW 470
++ Q +++ GL + ++D+ + G + A K +++ PD V W
Sbjct: 662 HAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIW 721
Query: 471 SSLILGYAQFGCGDE-----ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
S+L LG + E A KLFT S + N V L + S +G+ E L
Sbjct: 722 SAL-LGACKIHKNAEIGRRAAEKLFTTEPS--NAGNYVMLSNIY---SSLGMWVEVAELR 775
Query: 526 RIMENE 531
+IM+
Sbjct: 776 KIMKQR 781
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 118/505 (23%), Positives = 214/505 (42%), Gaps = 63/505 (12%)
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
+ G L +AR FD MP R++++W +MI+ + DA ++L + G +
Sbjct: 45 RLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDA-----RILFDAISGGNVRTAT 99
Query: 142 IIKACSGLGSVCLGRQLHA-HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
I+ + G LGR L A V + +A NA+++ Y + I AR +F + +
Sbjct: 100 ILLS----GYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSR 155
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEID 260
DVTSW SM+ + CH +M+ A LF ++
Sbjct: 156 DVTSWNSMVTGY----------CHSRQMVD---------------------AWNLFKQMP 184
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+L +W +I+G + +F M PD S+L A G L
Sbjct: 185 QRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEV 244
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+ ++K GF+S+V + +IL +Y + + + + F + + +W+++IAA
Sbjct: 245 LRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGG 304
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD----- 435
+ + ++ R I P + C + IT+ + F+
Sbjct: 305 RIDAAIAVYGRDPVKSI-PSQTALLTGLARCGR-------------ITEARILFEQIPDP 350
Query: 436 -VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
V N ++ Y++ G + A++LF+ M + +SW+ +I GYAQ G +EAL L +
Sbjct: 351 IVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALH 410
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCV 554
G+ P+L +L ACSH+G +E G ++ + + G C+ ++ + + +
Sbjct: 411 RNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAV-KAGCQFNSYVCNALISMYGKCRNM 469
Query: 555 HEAEDFINQMACDADIVVWKSLLAS 579
N+M D V W S +A+
Sbjct: 470 EYVRQVFNRMRV-KDTVSWNSFIAA 493
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 155/353 (43%), Gaps = 71/353 (20%)
Query: 44 ACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS------------------ 85
ACS + +L+ GR+VH + + CQ + + N +++MYGKC +
Sbjct: 427 ACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVS 486
Query: 86 -------------LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
LEDAR FD M R+VVSWT +I+ +Q + ++A++ + ML
Sbjct: 487 WNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHE 546
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
P ++ C GLGS LG+Q+H IK S LI NAL++MY K D+
Sbjct: 547 KPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCG-CADSHK 605
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA 252
VF + +D+ +W + I ++ G EA+ + M G PNE F + +ACS+
Sbjct: 606 VFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVL-PNEVTFVGLLNACSH-- 662
Query: 253 RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIG 311
AG+ +E F M RD L P L ++ + +G
Sbjct: 663 -------------------AGL-----VDEGWQFFKSMSRDYGLTP-LLEHYACMVDLLG 697
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
R QG + +I M + + + +A+L C + NA E+G+ A
Sbjct: 698 RTGDVQGAE--KFIYDMPIEPDTVIWSALL---GACKIHKNA-----EIGRRA 740
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 187/573 (32%), Positives = 292/573 (50%), Gaps = 54/573 (9%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
L RK+ D + +V+ N ++ Y K G+L AR FD M QR+VV+WT +I G
Sbjct: 58 LGAARKLFDEM----PHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGG 113
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
+Q+ + +A L+ M + G++P T +++ + SV Q+H HV+K + S
Sbjct: 114 YAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDST 173
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
L+ N+L+ Y K + A ++F +A KD ++ +++ +SK G+ +A+ F +M
Sbjct: 174 LMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQD 233
Query: 231 HGAYQPNEFIFGSVFSAC------------------SNF--------------------- 251
G ++P+EF F +V +A NF
Sbjct: 234 LG-FRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIV 292
Query: 252 -ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR----DRELLPDGLTVHSLL 306
AR LF E+ D S+N LI A + E++ LF E++ DR P +LL
Sbjct: 293 EARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFP----FATLL 348
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
L L G Q+HS I S V V N+++ MYAKC A +F +L + S
Sbjct: 349 SIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQS-S 407
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
V W ++I+ +Q E+ +LF M ++I D T+ ++ ACA +ASL + QLH
Sbjct: 408 VPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSR 467
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
I ++G +VF + L+D+Y KCGS+ A ++F M + VSW++LI YAQ G G A
Sbjct: 468 IIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHA 527
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
L+ F +M G+ PN V+ + +L ACSH GLVEEGL + M Y + P REH + +VD
Sbjct: 528 LRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVD 587
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+L R+G EAE + +M + D ++W S+L S
Sbjct: 588 MLCRSGRFDEAEKLMARMPFEPDEIMWSSILNS 620
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/491 (26%), Positives = 227/491 (46%), Gaps = 66/491 (13%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T A L+S + S+ +VH H++ +++ N +L+ Y K SL A F M
Sbjct: 141 TLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHM 200
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+++ V++ A++ G S+ +DAI L+ +M G P +FTF +++ A + + G+
Sbjct: 201 AEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQ 260
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H+ V+K ++ NAL+ Y+K DRI++AR +F + D S+ +I + G
Sbjct: 261 QVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNG 320
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSV-------------------------------- 244
E+L F E L + +F F ++
Sbjct: 321 RVEESLELFRE-LQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVG 379
Query: 245 ------FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
++ C F A +F ++ W ALI+G + + LF EM ++
Sbjct: 380 NSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIG 439
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
D T S+L AC +L G Q+HS II+ G SNV +A++ MYAKC + AL +
Sbjct: 440 ADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQM 499
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F+E+ +SVSWN++I+A Q+ R F +M+ S ++P+ ++F ++ AC+
Sbjct: 500 FQEMPVR-NSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACS---- 554
Query: 417 LEMVTQLHCYITKTGLAF-----DVFVMN-------GLMDIYIKCGSLGSARKLFNFME- 463
HC + + GL + V+ + ++D+ + G A KL M
Sbjct: 555 -------HCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPF 607
Query: 464 NPDVVSWSSLI 474
PD + WSS++
Sbjct: 608 EPDEIMWSSIL 618
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 154/291 (52%), Gaps = 14/291 (4%)
Query: 29 TNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
T R +A L+S ++ +L++GR++H +++ +V++ N +++MY KC +
Sbjct: 335 TRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGE 394
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A F + ++ V WTA+I+G Q D +KL+++M ++ + T+ SI++AC+
Sbjct: 395 ANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACAN 454
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
L S+ LG+QLH+ +I+S S++ + +AL+ MY K I +A +F + ++ SW ++
Sbjct: 455 LASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNAL 514
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEID--- 260
I+A+++ G AL F +M+H G QPN F S+ ACS+ + FN +
Sbjct: 515 ISAYAQNGDGGHALRSFEQMIHSG-LQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVY 573
Query: 261 --SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
P + +++ + +EA L + M PD + S+L +C
Sbjct: 574 KLEPRREHYASMVDMLCRSGRFDEAEKLMARM---PFEPDEIMWSSILNSC 621
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 182/397 (45%), Gaps = 44/397 (11%)
Query: 30 NIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
++ RPS T+A +++A + ++ G++VH ++ +V + N +L+ Y K +
Sbjct: 233 DLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIV 292
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
+AR F +MP+ + +S+ +I C+ N + ++++L+ ++ + QF F +++ +
Sbjct: 293 EARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAA 352
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
++ +GRQ+H+ I ++ S ++ N+L+ MY K D+ +A +F+ +A + W +
Sbjct: 353 NSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTA 412
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------- 254
+I+ + + G + L F EM H + + S+ AC+N A +
Sbjct: 413 LISGYVQKGLHEDGLKLFVEM-HRAKIGADSATYASILRACANLASLTLGKQLHSRIIRS 471
Query: 255 ---------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
+F E+ + SWNALI+ A + + A+ F
Sbjct: 472 GCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSF 531
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAK 346
+M L P+ ++ S+LCAC + +G+Q + + ++ + +++ M +
Sbjct: 532 EQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCR 591
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
A + + D + W+SI+ +C H E
Sbjct: 592 SGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQE 628
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
+ KTG + N + +++ G LG+ARKLF+ M + +V+S +++I+GY + G A
Sbjct: 33 MIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTA 92
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
LF M V ++VT ++ + E +L+ M +G++P + ++
Sbjct: 93 RSLFDSM----VQRSVVTWTMLIGGYAQHNRFLEAFNLFADM-CRHGMVPDHITLATLLS 147
Query: 547 LLARAGCVHEAEDF---INQMACDADIVVWKSLLAS 579
V+E + ++ D+ ++V SLL S
Sbjct: 148 GFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDS 183
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 180/581 (30%), Positives = 284/581 (48%), Gaps = 44/581 (7%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++ C+ L GR+ H +L++ + +L +L MY CG+ DA+ F ++
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
W MI G + Q + A+ Y +ML G +P ++TF +IKAC GL SV LGR +H
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+ + ++LI Y++ I DAR +F + KD W M+ + K G
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDN 231
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFN------------EIDSP------ 262
A F EM PN F V S C++ I F E+DSP
Sbjct: 232 ATGVFMEM-RRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFA 290
Query: 263 ------------------------DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
D+ A+I+G + N A+ +F + + +
Sbjct: 291 LIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRAN 350
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+T+ S+L AC G L G ++H +I+K G + V +AI+ MYAKC L A F
Sbjct: 351 SVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFI 410
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ + D+V WNS+I +C Q+ + EE LF +M + K D ++ + + ACA + +L
Sbjct: 411 GI-SDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALH 469
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
++H ++ + D+F + L+D+Y KCG+L A ++F+ ME + VSW+S+I Y
Sbjct: 470 YGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYG 529
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
G ++L LF M G+ P+ VT + +++AC H G V+EG+H +R M E GI+
Sbjct: 530 NHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARM 589
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH +C+VDL RAG ++EA IN M D VW +LL +
Sbjct: 590 EHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGA 630
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 128/482 (26%), Positives = 217/482 (45%), Gaps = 46/482 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +I AC L S+ LGR VHD I + DV + + ++ Y + G + DAR FD+M
Sbjct: 149 TFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRM 208
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P ++ V W M+ G +N ++A ++++M ++ P TF ++ C+ + G
Sbjct: 209 PSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGS 268
Query: 157 QLHAHVIKS--EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
QLH V+ S E S + ALI +Y K + AR +F D+ +MI+ +
Sbjct: 269 QLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVL 328
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE---------------- 258
G AL F +L + N SV AC+ A + +
Sbjct: 329 NGMNNNALEIFRWLLQE-RMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCY 387
Query: 259 ------------------------IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
I D WN++I + + EA+ LF +M
Sbjct: 388 VGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAG 447
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
D +++ + L AC L+ G ++H+++++ F S++ +A++ MY+KC L A
Sbjct: 448 TKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLAC 507
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
VF + + + VSWNSIIAA H + ++ LF ML I+PDH+TF ++ AC
Sbjct: 508 RVFDTM-EEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHA 566
Query: 415 ASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSS 472
+ E + C + G+ + ++D++ + G L A + N M +PD W +
Sbjct: 567 GQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGT 626
Query: 473 LI 474
L+
Sbjct: 627 LL 628
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 218/482 (45%), Gaps = 48/482 (9%)
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
SI++ C+ + GRQ HA ++ + G + I L+ MY LDA+N+F +
Sbjct: 51 SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------- 251
W MI F+ +G AL + +ML G P+++ F V AC
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTL-PDKYTFPYVIKACGGLNSVALGRVV 169
Query: 252 -------------------------------ARILFNEIDSPDLASWNALIAGVASHSNA 280
AR LF+ + S D WN ++ G + +
Sbjct: 170 HDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDW 229
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN-- 338
+ A +F EMR E P+ +T +L C + + G Q+H ++ G + + PV N
Sbjct: 230 DNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTF 289
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
A++ +Y KC + A +F + D V ++I+ + + +F +L +++
Sbjct: 290 ALIDIYFKCRDVEMARKIFDQR-TPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMR 348
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
+ +T V+ ACA +A+L + +LH +I K G +V + +MD+Y KCG L A +
Sbjct: 349 ANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQT 408
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
F + + D V W+S+I +Q G +EA+ LF +M G + V++ L+AC+++ +
Sbjct: 409 FIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPAL 468
Query: 519 EEGLHLYRIMENEYGIIPTREHC-SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
G ++ M G + S ++D+ ++ G + A + M + + V W S++
Sbjct: 469 HYGKEIHAFMMR--GAFRSDLFAESALIDMYSKCGNLDLACRVFDTME-EKNEVSWNSII 525
Query: 578 AS 579
A+
Sbjct: 526 AA 527
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 188/389 (48%), Gaps = 42/389 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH--ILNMYGKCGSLEDARMGFD 94
T+A ++S C+S + G ++H ++ S + D + N ++++Y KC +E AR FD
Sbjct: 250 TFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFD 309
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+ ++V TAMI+G N N+A++++ +LQ + T S++ AC+GL ++ L
Sbjct: 310 QRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTL 369
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G++LH H++K+ HG +A++ MY K R+ A F GI+ KD W SMI + S+
Sbjct: 370 GKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQ 429
Query: 215 LGYELEALCHFNEM------------------------LHH----------GAYQPNEFI 240
G EA+ F +M LH+ GA++ + F
Sbjct: 430 NGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFA 489
Query: 241 FGSV---FSACSN--FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
++ +S C N A +F+ ++ + SWN++IA +H ++++LF M +
Sbjct: 490 ESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGI 549
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAILTMYAKCSVLCNAL 354
PD +T +++ AC + +G+ + ++G + + ++ ++ + L A
Sbjct: 550 QPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAF 609
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ + + D+ W +++ AC H E
Sbjct: 610 GMINSMPFSPDAGVWGTLLGACRLHGNVE 638
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 124/224 (55%), Gaps = 1/224 (0%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+R T A ++ AC+ L +L LG+++H HIL + + + I++MY KCG L+ A
Sbjct: 347 MRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAH 406
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F + ++ V W +MI CSQN + +AI L+ QM +G + + + AC+ L
Sbjct: 407 QTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLP 466
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G+++HA +++ S L A++ALI MY+K + A VF + K+ SW S+IA
Sbjct: 467 ALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIA 526
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
A+ G ++L F+ ML G QP+ F ++ SAC + ++
Sbjct: 527 AYGNHGRLKDSLNLFHGMLGDGI-QPDHVTFLAIISACGHAGQV 569
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 117/269 (43%), Gaps = 15/269 (5%)
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
FS D L P + S+L C L QG Q H+ ++ G N + +L MY
Sbjct: 37 FSIHNDDSLAPQ---LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVL 93
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
C +A +F +L + S WN +I Q + + +ML PD TF
Sbjct: 94 CGAFLDAKNIFYQL-RLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPY 152
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
V+ AC + S+ + +H I G DVFV + L+ Y + G + AR LF+ M + D
Sbjct: 153 VIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKD 212
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS-----------HV 515
V W+ ++ GY + G D A +F MR +PN VT VL+ C+ H
Sbjct: 213 GVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHG 272
Query: 516 GLVEEGLHLYRIMENEYGIIPTREHCSCV 544
+V GL + + N + +I C V
Sbjct: 273 LVVSSGLEMDSPVANTFALIDIYFKCRDV 301
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 187/577 (32%), Positives = 291/577 (50%), Gaps = 60/577 (10%)
Query: 51 LQLGRKVHDHILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ-RNVVSWTAMI 108
L+LGR +H +L D V+ N +L +Y +CG++ AR FD M R++VSWTAM
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 109 AGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH- 167
+ ++N E +++ L +ML+SG++P +T ++ AC CL + ++
Sbjct: 124 SCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 168 -GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
G+ + +ALI M + + AR VF G+ K V W +I+ + + EA+ F
Sbjct: 184 WGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFL 243
Query: 227 EMLHHGAYQPNEFIFGSVFSACS------------------------------------- 249
+ L G ++P+ + S+ SAC+
Sbjct: 244 DFLEDG-FEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKS 302
Query: 250 ------NFARILFNEIDSPDLASWNALIAG-VASHSNANEAMSLFSEMRDRELLPDGLTV 302
++A +F + D+ SW ALI+G V S N+ M LF EM + + P+ +T
Sbjct: 303 NIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITY 362
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
S+L AC G QVH+++IK + V NA+++MYA+ + A VF +L
Sbjct: 363 SSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQL-- 420
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
+ + +C+ + L RM + TF ++ A A + L Q
Sbjct: 421 ------YERSMISCITEGRDAPLDHRIGRM---DMGISSSTFASLISAAASVGMLTKGQQ 471
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGC 482
LH K G D FV N L+ +Y +CG L A + FN +++ +V+SW+S+I G A+ G
Sbjct: 472 LHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGY 531
Query: 483 GDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCS 542
+ AL LF M GV PN VT + VL+ACSHVGLV EG +R M+ ++G+IP EH +
Sbjct: 532 AERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYA 591
Query: 543 CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
C+VDLLAR+G V EA +FIN+M AD +VWK+LL +
Sbjct: 592 CMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGA 628
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 190/385 (49%), Gaps = 42/385 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCG---SLEDARMGF 93
T + +ISAC+ L S++LG ++H L D + +++MY K +++ A F
Sbjct: 256 TMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVF 315
Query: 94 DKMPQRNVVSWTAMIAGCSQN-YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
++M + +V+SWTA+I+G Q+ QEN + L+ +ML + P T+ SI+KAC+ +
Sbjct: 316 ERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDH 375
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG---------------- 196
GRQ+HAHVIKS + NAL++MY + + +AR VF+
Sbjct: 376 DSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCITEGRDA 435
Query: 197 -----IARKDV----TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
I R D+ +++ S+I+A + +G L + M + + F+ S+ S
Sbjct: 436 PLDHRIGRMDMGISSSTFASLISAAASVGM-LTKGQQLHAMTLKAGFGSDRFVSNSLVSM 494
Query: 248 CSNFARIL-----FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
S + FNE+ ++ SW ++I+G+A H A A+SLF +M + P+ +T
Sbjct: 495 YSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTY 554
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSN-VPVCN---AILTMYAKCSVLCNALLVFK 358
++L AC + +G + Y M D +P ++ + A+ ++ AL
Sbjct: 555 IAVLSACSHVGLVREGKE---YFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFIN 611
Query: 359 ELGKNADSVSWNSIIAACLQHNQAE 383
E+ AD++ W +++ AC H+ E
Sbjct: 612 EMPLKADALVWKTLLGACRSHDNIE 636
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 158/320 (49%), Gaps = 38/320 (11%)
Query: 5 YVSSLCKQN----LYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDH 60
YV S ++N L+ E L N +I+ TY+ ++ AC+++ GR+VH H
Sbjct: 333 YVQSGVQENKVMVLFGEML--------NESIKPNHITYSSILKACANISDHDSGRQVHAH 384
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
++ S + N +++MY + G +E+AR F+++ +R+++S + DA
Sbjct: 385 VIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCIT---------EGRDA 435
Query: 121 -IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
+ I + G+ TF S+I A + +G + G+QLHA +K+ GS N+L++
Sbjct: 436 PLDHRIGRMDMGI--SSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVS 493
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY++ + DA F+ + ++V SW SMI+ +K GY AL F++M+ G +PN+
Sbjct: 494 MYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGV-KPNDV 552
Query: 240 IFGSVFSACSNFARI-----LFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSE 289
+ +V SACS+ + F + P + + ++ +A EA+ +E
Sbjct: 553 TYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINE 612
Query: 290 MRDRELLPDGLTVHSLLCAC 309
M L D L +LL AC
Sbjct: 613 M---PLKADALVWKTLLGAC 629
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/489 (32%), Positives = 261/489 (53%), Gaps = 34/489 (6%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F + + N + W M+ G + + A+KLY+ M+ G++P +TF ++K+C+ +
Sbjct: 23 FATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAF 82
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+Q+H HV+K + L +LI+MY + R+ DA VF + +DV S+ ++I +
Sbjct: 83 EEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGY 142
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
+ G++ SA F +EI D+ SWNA+I+
Sbjct: 143 AS--------------------------SGNIRSAQEMF-----DEIPVKDVVSWNAMIS 171
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A + EA+ LF EM + PD T+ ++L AC ++ G QVHS+I GF S
Sbjct: 172 GYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGS 231
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N+ + NA++ +Y+KC + A +F+ L D VSWN++I N +E LF M
Sbjct: 232 NLKIVNALIDLYSKCGQVETACGLFEGLS-CKDVVSWNTLIGGYTHMNLYKEALLLFQEM 290
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFDVFVMNGLMDIYIKCG 450
L S P+ +T ++ ACA + ++++ +H YI K + + L+D+Y KCG
Sbjct: 291 LRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCG 350
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ +A ++FN M + + SW+++I G+A G + LF+RMR G+ P+ +T VG+L+
Sbjct: 351 DIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLS 410
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSH G ++ G H+++ M +Y I P EH C++DLL +G EA++ I M + D
Sbjct: 411 ACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDG 470
Query: 571 VVWKSLLAS 579
V+W SLL +
Sbjct: 471 VIWCSLLKA 479
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 170/346 (49%), Gaps = 33/346 (9%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+A +F I P+ WN ++ G A S+ A+ L+ M LLP+ T LL +C
Sbjct: 18 YAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCA 77
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN------- 363
+G Q+H +++K+G++ ++ V ++++MYA+ L +A VF
Sbjct: 78 KSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTA 137
Query: 364 -----------------------ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
D VSWN++I+ + +E LF M+ + ++PD
Sbjct: 138 LITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPD 197
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T V+ ACA+ S+E+ Q+H +I G ++ ++N L+D+Y KCG + +A LF
Sbjct: 198 EGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFE 257
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
+ DVVSW++LI GY EAL LF M G SPN VT+V +L AC+H+G ++
Sbjct: 258 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDI 317
Query: 521 G--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
G +H+Y I + + + ++D+ A+ G + A N M
Sbjct: 318 GRWIHVY-IDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSM 362
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 198/439 (45%), Gaps = 77/439 (17%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L+ +C+ ++ + G+++H H+L +PD+ + +++MY + G LEDA FD+
Sbjct: 68 TFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRS 127
Query: 97 PQRNVVSWT-------------------------------AMIAGCSQNYQENDAIKLYI 125
R+VVS+T AMI+G ++ +A++L+
Sbjct: 128 SHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFK 187
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M+++ V P + T +++ AC+ SV LGRQ+H+ + GS+L NALI +Y+K
Sbjct: 188 EMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCG 247
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
++ A +F G++ KDV SW ++I ++ + EAL F EML G PN+ S+
Sbjct: 248 QVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGE-SPNDVTIVSIL 306
Query: 246 SACSNFARI------------------------------------------LFNEIDSPD 263
AC++ I +FN +
Sbjct: 307 PACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKS 366
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
L+SWNA+I G A H AN LFS MR + PD +T LL AC L G +
Sbjct: 367 LSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFK 426
Query: 324 YIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ + + ++ + + A + K + D V W S++ AC +H
Sbjct: 427 SMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNL 486
Query: 383 EELFRLFSRMLASQIKPDH 401
EL F+R L +++P++
Sbjct: 487 -ELAESFARNLM-KVEPEN 503
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 157/319 (49%), Gaps = 17/319 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + Y EAL + TN+R T ++SAC+ RS++LGR+VH I
Sbjct: 167 NAMISGYAETGSYKEALELFK-EMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWID 225
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ + N ++++Y KCG +E A F+ + ++VVSW +I G + +A+
Sbjct: 226 DHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALL 285
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK--SEHGSHLIAQNALIAM 180
L+ +ML+SG P T SI+ AC+ LG++ +GR +H ++ K + + + +LI M
Sbjct: 286 LFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDM 345
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K I A VF+ + K ++SW +MI F+ G F+ M +G +P++
Sbjct: 346 YAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGI-EPDDIT 404
Query: 241 FGSVFSACS-----NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEM 290
F + SACS + R +F + +P L + +I + EA + M
Sbjct: 405 FVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTM 464
Query: 291 RDRELLPDGLTVHSLLCAC 309
+ PDG+ SLL AC
Sbjct: 465 ---PMEPDGVIWCSLLKAC 480
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 166/553 (30%), Positives = 290/553 (52%), Gaps = 82/553 (14%)
Query: 104 WTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI 163
++ ++ C+++ D +++ +++S F +I G V + R+L ++
Sbjct: 22 FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRML 81
Query: 164 KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALC 223
+ ++ + N++I +TK + DA ++F + + D SW SMI+ F + G EAL
Sbjct: 82 ER----NIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137
Query: 224 HFNEMLHHGAYQPNEFIFGSVFSACS---------------------------------- 249
+F +M HG + NE+ FGS SAC+
Sbjct: 138 YFAQMHGHG-FLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMY 196
Query: 250 ------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
+A+ +F+E+ SWN+LI + +EA+ +F EM + PD +T+
Sbjct: 197 SKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLA 256
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
S++ AC + +G Q+H+ ++K F +++ + NA+L MYAKC+ + A ++F +
Sbjct: 257 SVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPI 316
Query: 363 NA------------------------------DSVSWNSIIAACLQHNQAEELFRLFSRM 392
+ D ++WN++IA C Q+ + EE LF +
Sbjct: 317 RSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLL 376
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF------DVFVMNGLMDIY 446
+ P H TF +++ ACA +A L++ Q H ++ K G F DVFV N L+D+Y
Sbjct: 377 KRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMY 436
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
+KCGS+ + ++F M D VSW+++I+GYAQ G G++AL++F +M G +P+ VT++
Sbjct: 437 MKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMI 496
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
GVL ACSH GL++EG + +R M ++G++P ++H +C+VDLL RAG + EA++ I +M+
Sbjct: 497 GVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSM 556
Query: 567 DADIVVWKSLLAS 579
D +VW SLLA+
Sbjct: 557 QPDAIVWGSLLAA 569
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 210/456 (46%), Gaps = 81/456 (17%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + ++EALV Y + + ++ +SAC+ L+ L+LG ++H +
Sbjct: 120 NSMISGFEQHGRFDEALV-YFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVY 178
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S DV + + +++MY KCG +E A+ FD+M R+ VSW ++I QN ++A+K
Sbjct: 179 RSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALK 238
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK-SEHGSHLIAQNALIAMY 181
++++M++ GV P + T S++ AC+ + ++ G+Q+HA V+K E + LI NAL+ MY
Sbjct: 239 IFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMY 298
Query: 182 TKFDRILDARNVF---------------SGIAR----------------KDVTSWGSMIA 210
K +RI +AR +F SG A+ KDV +W ++IA
Sbjct: 299 AKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIA 358
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------- 254
++ G EAL F +L + P + FG++ +AC+N A +
Sbjct: 359 GCTQNGENEEALILF-RLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFR 417
Query: 255 ------------------------------LFNEIDSPDLASWNALIAGVASHSNANEAM 284
+F + D SWNA+I G A + N+A+
Sbjct: 418 FQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKAL 477
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG-MQVHSYIIKMGFDSNVPVCNAILTM 343
+F +M + PD +T+ +LCAC L +G S + G ++ +
Sbjct: 478 EVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDL 537
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+ L A + +E+ D++ W S++AAC H
Sbjct: 538 LGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVH 573
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 32/271 (11%)
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
L ++ L D LL C + +VH+ IIK F S + N ++ +Y
Sbjct: 6 LVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYG 65
Query: 346 KC----------------------SVLC---------NALLVFKELGKNADSVSWNSIIA 374
KC S++C +A+ +F+++ + D SWNS+I+
Sbjct: 66 KCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQ-VDQCSWNSMIS 124
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
QH + +E F++M + +F + ACA + L++ +Q+H + ++
Sbjct: 125 GFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLS 184
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
DV++ + L+D+Y KCG + A+ +F+ M VSW+SLI Y Q G DEALK+F M
Sbjct: 185 DVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMI 244
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
GV P+ VTL V++AC+ + ++EG ++
Sbjct: 245 KCGVEPDEVTLASVVSACATISAIKEGQQIH 275
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D F+ ++ CA+ S +++H I K+ A + F+ N L+D+Y KCG + ARKLF
Sbjct: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
Query: 460 N-----------------------------FMENP--DVVSWSSLILGYAQFGCGDEALK 488
+ F + P D SW+S+I G+ Q G DEAL
Sbjct: 78 DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLL 548
F +M G N + L+AC+ + ++ G ++ ++ + S +VD+
Sbjct: 138 YFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS-NYLSDVYMGSALVDMY 196
Query: 549 ARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++ G V A+ ++M + V W SL+
Sbjct: 197 SKCGRVEYAQSVFDEMTVRSR-VSWNSLIT 225
>gi|357481301|ref|XP_003610936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512271|gb|AES93894.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 812
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 166/542 (30%), Positives = 288/542 (53%), Gaps = 33/542 (6%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+ C++L+SL G+++H HI+ + +L + ++N Y L DA++ + +
Sbjct: 98 LLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIVAECSNSFD 157
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+ W +I+ +N DAI +Y +ML GV+P +T+ S++KAC L G +H
Sbjct: 158 PLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHK 217
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+ +S L NAL+ MY +F ++ AR +F + +D SW +MI+ ++ G E
Sbjct: 218 AIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWDE 277
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNA 280
A F M G + ++ WN + G N
Sbjct: 278 AFRLFGCMREAGIER---------------------------NIIIWNTIAGGCLHTGNF 310
Query: 281 NEAMSLFSEMRDR-ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
A+ LFS+MR +L + V C+ IG + L G ++H + ++ FD V N
Sbjct: 311 KGALKLFSQMRAVIQLDSVAMVVGLNACSHIGAVKL--GKEIHGHAVRTCFDVFDNVKNT 368
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
++TMY++C L +A L+F+++ + ++WN++++ +++EE+ L ML ++P
Sbjct: 369 LITMYSRCRDLNHAYLLFRKIDEKG-LITWNAMLSGFAHMDRSEEVSFLLREMLREGVEP 427
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM--NGLMDIYIKCGSLGSARK 457
+++T ++ CA++A+L+ + HCY+ K F +++ N L+++Y + G + ARK
Sbjct: 428 NYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARK 487
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
+F+ + D V+++S+I+GY G G+ ALKLF MR L + P+ VT+V VL ACSH GL
Sbjct: 488 VFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGL 547
Query: 518 VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
V +G L+R M YGI P EH SC+VDL RAG + +A++ I M+C +W +L+
Sbjct: 548 VAQGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPTSAIWATLI 607
Query: 578 AS 579
+
Sbjct: 608 GA 609
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 180/442 (40%), Gaps = 80/442 (18%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY ++ AC L G VH I S + + + N ++ MYG+ G LE AR FD M
Sbjct: 195 TYPSVLKACGELLDYDSGVAVHKAIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIM 254
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI-------------- 142
P R+ VSW MI+ + ++A +L+ M ++G+ + +I
Sbjct: 255 PARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGAL 314
Query: 143 --------------------IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ ACS +G+V LG+++H H +++ +N LI MY+
Sbjct: 315 KLFSQMRAVIQLDSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMYS 374
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
+ + A +F I K + +W +M++ F+ + E EML G +PN
Sbjct: 375 RCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGV-EPNYVTIA 433
Query: 243 SVFSACSNF------------------------------------------ARILFNEID 260
S+ C+ AR +F+ +
Sbjct: 434 SILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSLS 493
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D ++ ++I G + A+ LF+EMR + PD +T+ ++L AC + QG
Sbjct: 494 RKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLVAQGQV 553
Query: 321 VHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+ +I++ G D V + ++ ++ + +L A V + S W ++I AC H
Sbjct: 554 LFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPTSAIWATLIGACKIH 613
Query: 380 NQAEELFRLFSRMLASQIKPDH 401
++L ++KPDH
Sbjct: 614 GNTVIGEWAAGKLL--EMKPDH 633
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 120/228 (52%), Gaps = 1/228 (0%)
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
+ LL C +L QG Q+H++II +G N + + ++ YA +L +A +V E
Sbjct: 95 IKHLLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIV-AECS 153
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
+ D + WN +I+ +++ E+ ++ RML+ + PD T+ V+ AC ++ +
Sbjct: 154 NSFDPLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGV 213
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
+H I ++ + + +FV N L+ +Y + G L AR+LF+ M D VSW+++I YA G
Sbjct: 214 AVHKAIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRG 273
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
DEA +LF MR G+ N++ + C H G + L L+ M
Sbjct: 274 LWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMR 321
>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 174/560 (31%), Positives = 283/560 (50%), Gaps = 40/560 (7%)
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
++ +H++ V + +L++Y K G + A FD MP R+VVSW A+I G S+N
Sbjct: 463 QIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNG 522
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ- 174
+ A++L++QML+ G P Q T ++ +C L V G+ +H IKS G HL Q
Sbjct: 523 YDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKS--GLHLDPQV 580
Query: 175 -NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA 233
NAL +MY K + A +F + K V SW +MI A+ + G+ EA+ F M+ G
Sbjct: 581 KNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGV 640
Query: 234 YQPNEFIFGSVFSACSN----------------------------------FARILFNEI 259
+ ++ S+ SA +N A +L+ +
Sbjct: 641 -EVSQVTIMSLPSANANPESIHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSL 699
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
+L S A+I A N M FS+M + PD + + S+L + + G
Sbjct: 700 PQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGH 759
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
H Y IK G D+ V N +++MY+K + + +F + + +SWNS+I+ C+Q
Sbjct: 760 VFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKP-LISWNSVISGCVQA 818
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+A LF +M PD IT ++ C+++ L+ +LH YI + L + FV
Sbjct: 819 GRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEMEDFVG 878
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
L+ +Y KCGS+ A ++F + P + +W+++I GY+ +G +AL ++ M+ GV
Sbjct: 879 TALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQGVE 938
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
P+ +T +GVL AC+H GL+ EG ++IM Y ++PT +HC+C+V LLAR G EA
Sbjct: 939 PDKITFLGVLAACTHGGLIHEGRRYFQIMTKVYDMVPTLQHCACMVGLLARVGLFEEALL 998
Query: 560 FINQMACDADIVVWKSLLAS 579
FI M + D VW + L++
Sbjct: 999 FIKNMEKEPDSAVWGAFLSA 1018
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 199/438 (45%), Gaps = 53/438 (12%)
Query: 21 AYDFSQNNTNIRI-------RPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQ 73
YDFS +++ R +T GL+ +C L + G+ +H + S D ++
Sbjct: 522 GYDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVK 581
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N + +MY KCG LE A F++M ++VVSW MI QN ++A+ ++ +M+ +GV
Sbjct: 582 NALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVE 641
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
Q T S+ A + S+ H + IK +LI MY ++ A +
Sbjct: 642 VSQVTIMSLPSANANPESI------HCYTIKVGLADDASVVTSLICMYARYGSTDHAELL 695
Query: 194 FSGIARKDVTSWGSMIAAFSK---LGYELEALCHFNEM-----------LHHGAYQPNEF 239
+ + +K++ S ++I ++++ LG +E+ +++ + HG P
Sbjct: 696 YWSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHI 755
Query: 240 IFGSVF--------------------SACSNFARI-----LFNEIDSPDLASWNALIAGV 274
G VF S S F + LF+ + L SWN++I+G
Sbjct: 756 CIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGC 815
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
A+ A+ LF +M+ PD +T+ SLL C L G ++HSYI++ +
Sbjct: 816 VQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEMED 875
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V A++ MY KC + +A VFK +GK +WN++I+ + + +S M
Sbjct: 876 FVGTALIHMYTKCGSIVHAERVFKSIGKPC-LATWNAMISGYSCYGFEHKALTCYSEMQE 934
Query: 395 SQIKPDHITFNDVMGACA 412
++PD ITF V+ AC
Sbjct: 935 QGVEPDKITFLGVLAACT 952
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 187/424 (44%), Gaps = 53/424 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + + + ++EA+ + + + T L SA ++ S +H + +
Sbjct: 613 NTMIGAYGQNGFFDEAMFVFK-RMIGAGVEVSQVTIMSLPSANANPES------IHCYTI 665
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
D + ++ MY + GS + A + + +PQ+N+VS TA+I ++ ++
Sbjct: 666 KVGLADDASVVTSLICMYARYGSTDHAELLYWSLPQKNLVSLTAIITSYAEAGNLGLVME 725
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ QM Q + P SI+ + +C+G H + IKS + + N LI+MY+
Sbjct: 726 SFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLDTFNLVTNGLISMYS 785
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
KF+ + +FSG+ K + SW S+I+ + G A+ F +M HG P+
Sbjct: 786 KFNNVEALFGLFSGMHEKPLISWNSVISGCVQAGRASHAIELFCQMKMHGC-NPDAITIA 844
Query: 243 SVFSACSNFARILFNE----------------------------------------IDSP 262
S+ S CS + F E I P
Sbjct: 845 SLLSGCSQLGYLQFGERLHSYILRNKLEMEDFVGTALIHMYTKCGSIVHAERVFKSIGKP 904
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
LA+WNA+I+G + + ++A++ +SEM+++ + PD +T +L AC +++G +
Sbjct: 905 CLATWNAMISGYSCYGFEHKALTCYSEMQEQGVEPDKITFLGVLAACTHGGLIHEGRRYF 964
Query: 323 SYIIKMGFDSNVPV---CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+ K+ +D VP C ++ + A+ + ALL K + K DS W + ++AC H
Sbjct: 965 QIMTKV-YDM-VPTLQHCACMVGLLARVGLFEEALLFIKNMEKEPDSAVWGAFLSACCIH 1022
Query: 380 NQAE 383
+ +
Sbjct: 1023 QEVK 1026
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 158/323 (48%), Gaps = 19/323 (5%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQ 73
N LV FSQ + + ++P + A ++ + + +G H + + S ++
Sbjct: 719 NLGLVMESFSQMH-QLNMKPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLDTFNLVT 777
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N +++MY K ++E F M ++ ++SW ++I+GC Q + + AI+L+ QM G
Sbjct: 778 NGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGCVQAGRASHAIELFCQMKMHGCN 837
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P T S++ CS LG + G +LH+++++++ ALI MYTK I+ A V
Sbjct: 838 PDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEMEDFVGTALIHMYTKCGSIVHAERV 897
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN--- 250
F I + + +W +MI+ +S G+E +AL ++EM G +P++ F V +AC++
Sbjct: 898 FKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQGV-EPDKITFLGVLAACTHGGL 956
Query: 251 ------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
+ +I+ D A + G+ + E LF + ++E PD +
Sbjct: 957 IHEGRRYFQIMTKVYDMVPTLQHCACMVGLLARVGLFEEALLFIKNMEKE--PDSAVWGA 1014
Query: 305 LLCACIGRLTLYQGMQVHSYIIK 327
L AC ++Q +++ Y+ K
Sbjct: 1015 FLSAC----CIHQEVKLGEYLAK 1033
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 118/242 (48%), Gaps = 8/242 (3%)
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+ +Q+ +++IK G D V V A+L +Y K + A F + D VSWN++I
Sbjct: 460 EAIQIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIR-DVVSWNALICGY 518
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
++ LF +ML P T ++ +C ++ + +H + K+GL D
Sbjct: 519 SRNGYDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDP 578
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
V N L +Y KCG L +A LF M + VVSW+++I Y Q G DEA+ +F RM
Sbjct: 579 QVKNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGA 638
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
GV + VT++ + +A ++ E +H Y I + G+ + ++ + AR G
Sbjct: 639 GVEVSQVTIMSLPSANAN----PESIHCYTI---KVGLADDASVVTSLICMYARYGSTDH 691
Query: 557 AE 558
AE
Sbjct: 692 AE 693
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 184/610 (30%), Positives = 302/610 (49%), Gaps = 47/610 (7%)
Query: 9 LCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQP 68
LC EA+ + S + + + L+ C R+ + G KV+ L S
Sbjct: 69 LCANGKLEEAMKLLN-SMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
V L N L M+ + G+L DA F KM +RN+ SW ++ G ++ ++A+ LY +ML
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 129 Q-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
GV P +TF +++ C G+ + G+++H HV++ + + NALI MY K +
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
AR +F + R+D+ SW +MI+ + + G E L F M + P+ SV SA
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAM-RGLSVDPDLMTLTSVISA 306
Query: 248 CS----------------------------------------NFARILFNEIDSPDLASW 267
C A LF+ ++ D+ SW
Sbjct: 307 CELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSW 366
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
+I+G + ++A+ + M + PD +TV ++L AC L G+++H IK
Sbjct: 367 TTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIK 426
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
S V V N ++ MY+KC + AL +F + + + +SW SIIA +N+ E
Sbjct: 427 ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIAGLRLNNRCFEAL- 484
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
+F R + ++P+ IT + ACA++ +L ++H ++ +TG+ D F+ N L+D+Y+
Sbjct: 485 IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYV 544
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
+CG + +A FN + DV SW+ L+ GY++ G G ++LF RM V P+ +T +
Sbjct: 545 RCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFIS 603
Query: 508 VLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
+L CS +V +GL + ME +YG+ P +H +CVVDLL RAG + EA FI +M
Sbjct: 604 LLCGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVT 662
Query: 568 ADIVVWKSLL 577
D VW +LL
Sbjct: 663 PDPAVWGALL 672
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/516 (26%), Positives = 245/516 (47%), Gaps = 51/516 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N V KQ ++EA+ Y ++ T+ ++ C + L G++VH H++
Sbjct: 164 NVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVV 223
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D+ + N ++ MY KCG ++ AR+ FD+MP+R+++SW AMI+G +N ++ ++
Sbjct: 224 RYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLE 283
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ M V P T S+I AC LG LGR +HA+VI + + N+L MY
Sbjct: 284 LFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYL 343
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
+A +FS + RKD+ SW +MI+ + +A+ + M+ + +P+E
Sbjct: 344 NAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY-RMMDQDSVKPDEITVA 402
Query: 243 SVFSACSNF---------------ARI-------------------------LFNEIDSP 262
+V SAC+ AR+ +F+ I
Sbjct: 403 AVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK 462
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
++ SW ++IAG+ ++ EA+ +M+ L P+ +T+ + L AC L G ++H
Sbjct: 463 NVISWTSIIAGLRLNNRCFEALIFLRQMK-MTLQPNAITLTAALAACARIGALMCGKEIH 521
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+++++ G + + NA+L MY +C + A F K D SWN ++ + Q
Sbjct: 522 AHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKK--DVTSWNILLTGYSERGQG 579
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT---GLAFDVFVM 439
+ LF RM+ S+++PD ITF ++ C+K +MV Q Y +K G+ ++
Sbjct: 580 SMVVELFDRMVKSRVRPDEITFISLLCGCSKS---QMVRQGLMYFSKMEDYGVTPNLKHY 636
Query: 440 NGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + G L A K M PD W +L+
Sbjct: 637 ACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALL 672
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 175/332 (52%), Gaps = 12/332 (3%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACI 310
A +F ++ +L SWN L+ G A +EAM L+ M + PD T +L C
Sbjct: 148 AWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCG 207
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
G L +G +VH ++++ G++ ++ V NA++TMY KC + +A L+F + + D +SWN
Sbjct: 208 GIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRR-DIISWN 266
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
++I+ ++ E LF M + PD +T V+ AC + + +H Y+ T
Sbjct: 267 AMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITT 326
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
G A D+ V N L +Y+ GS A KLF+ ME D+VSW+++I GY D+A+ +
Sbjct: 327 GFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY 386
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN----EYGIIPTREHCSCVVD 546
M V P+ +T+ VL+AC+ +G ++ G+ L+++ Y I+ +++
Sbjct: 387 RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN-----LIN 441
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++ C+ +A D + + +++ W S++A
Sbjct: 442 MYSKCKCIDKALDIFHNIP-RKNVISWTSIIA 472
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/515 (25%), Positives = 233/515 (45%), Gaps = 57/515 (11%)
Query: 110 GCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGS 169
G N + +A+KL M + V + F ++++ C + G ++++ + S
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
+ NA +AM+ +F ++DA VF ++ +++ SW ++ ++K GY EA+C ++ ML
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 230 HHGAYQPNEFIFGSVFSACSNF-------------------------------------- 251
G +P+ + F V C
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 252 --ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
AR+LF+ + D+ SWNA+I+G + +E + LF MR + PD +T+ S++ AC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 310 --IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
+G L G +H+Y+I GF ++ VCN++ MY A +F + + D V
Sbjct: 308 ELLGDRRL--GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK-DIV 364
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
SW ++I+ + ++ + M +KPD IT V+ ACA + L+ +LH
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K L V V N L+++Y KC + A +F+ + +V+SW+S+I G EAL
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLV----EEGLHLYRIMENEYGIIPTREHCSC 543
+F R + + PN +TL L AC+ +G + E H+ R +P +
Sbjct: 485 -IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP-----NA 538
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++D+ R G ++ A N D+ W LL
Sbjct: 539 LLDMYVRCGRMNTAWSQFNSQK--KDVTSWNILLT 571
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 188/444 (42%), Gaps = 54/444 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T +ISAC L +LGR +H +++ + D+ + N + MY GS +A F +M
Sbjct: 299 TLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM 358
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++++VSWT MI+G N+ + AI Y M Q V P + T +++ AC+ LG + G
Sbjct: 359 ERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGV 418
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+LH IK+ S++I N LI MY+K I A ++F I RK+V SW S+IA
Sbjct: 419 ELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNN 478
Query: 217 YELEALCHFNEM----------------------------------LHHGA----YQPNE 238
EAL +M L G + PN
Sbjct: 479 RCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA 538
Query: 239 FIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
+ V N A FN D+ SWN L+ G + + + LF M + PD
Sbjct: 539 LLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPD 597
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+T SLLC C + QG+ S + G N+ ++ + + L A +
Sbjct: 598 EITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQ 657
Query: 359 ELGKNADSVSWNSIIAACLQHNQ-------AEELFRLFSRMLASQIKPDHITFNDVMGAC 411
++ D W +++ AC H++ A+ +F L + + +I ++ C
Sbjct: 658 KMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGY-----YILLCNLYADC 712
Query: 412 AKMASLEMVTQLHCYITKTGLAFD 435
K + V ++ + + GL D
Sbjct: 713 GKWREVAKVRRM---MKENGLTVD 733
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 196/599 (32%), Positives = 309/599 (51%), Gaps = 61/599 (10%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILL--SKCQPDVVLQNHILNMYGKCGSLEDAR 90
++PS A L++A + R + LGR + H+L S + D V+ N +L +Y KC ++ AR
Sbjct: 45 LQPSEAAALLTAAARARDIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAAR 104
Query: 91 MGFDKMPQ--RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC-- 146
FD MP R++VSWTAM + S+N E +A++L+ + L+ G++P FT + +AC
Sbjct: 105 SVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFA 164
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
S L + G L G+ + ALI M+ K ++ R VF G+ + V W
Sbjct: 165 SELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWT 224
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------- 251
+I +++ GY EA+ F +ML +G +QP+++ S+ SAC+
Sbjct: 225 LLITRYAQSGYSDEAVELFLDMLENG-FQPDQYTLSSMLSACTELGSFRLGQQLHSLALR 283
Query: 252 ----------------------------ARILFNEIDSPDLASWNALIAG-VASHSNANE 282
AR +FN + ++ +W AL++G V S N+
Sbjct: 284 LGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQ 343
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF-DSNVPVCNAIL 341
M LF +M + + P+ +T S+L AC G Q+H++ +K D NV V NA++
Sbjct: 344 VMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNV-VGNALV 402
Query: 342 TMYAKCSVLCNALLVFKEL-GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+MYA+ + A F +L KN S S N Q ++ R+ ++
Sbjct: 403 SMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERM-------ELGIS 455
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
TF ++ A A + L +LH K G D + N L+ +Y +CG L A ++F+
Sbjct: 456 TFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFD 515
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
M + +V+SW+S+I G A+ G AL+LF M + GV PN VT + VL+ACSH GLV+E
Sbjct: 516 EMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKE 575
Query: 521 GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G +R+M+ +G+IP EH +C+VDLL R+G V +A DFIN+M C D +VWK+LL +
Sbjct: 576 GKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGA 634
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 189/387 (48%), Gaps = 41/387 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC---GSLEDARMGF 93
T + ++SAC+ L S +LG+++H L + D + +++MY K SL +AR F
Sbjct: 257 TLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVF 316
Query: 94 DKMPQRNVVSWTAMIAGCSQN-YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
++MP+ NV++WTA+++G Q Q+N + L+ +ML G+ P T+ S++KAC+ LG
Sbjct: 317 NRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQ 376
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW------- 205
GRQ+H H +KS + NAL++MY + I +AR+ F + K++ S+
Sbjct: 377 DSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGD 436
Query: 206 -----------------------GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
GS+I+A + +G L + + + + I
Sbjct: 437 GRSNTYQDYQIERMELGISTFTFGSLISAAASVGM-LTKGQRLHALSLKAGFGSDRAIGN 495
Query: 243 SVFSACSNFARIL-----FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
S+ S S ++ F+E++ ++ SW ++I+G+A H A A+ LF +M + P
Sbjct: 496 SLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKP 555
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALLV 356
+ +T ++L AC + +G + + K G + ++ + + ++ +AL
Sbjct: 556 NDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDF 615
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAE 383
E+ D++ W +++ AC HN +
Sbjct: 616 INEMPCQVDALVWKTLLGACKTHNNMD 642
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 132/225 (58%), Gaps = 10/225 (4%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
N IR TY+ ++ AC++L GR++H H + S V+ N +++MY + GS+E
Sbjct: 353 NEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIE 412
Query: 88 DARMGFDKMPQRNVVSWTAMI--AGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
+AR FD++ ++N+VS++ + G S YQ+ I+ ++ G+ FTFGS+I A
Sbjct: 413 EARHAFDQLYEKNMVSFSGNLDGDGRSNTYQD-----YQIERMELGI--STFTFGSLISA 465
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
+ +G + G++LHA +K+ GS N+L++MY++ ++DA VF + +V SW
Sbjct: 466 AASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISW 525
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
SMI+ +K GY AL F++M+ G +PN+ + +V SACS+
Sbjct: 526 TSMISGLAKHGYAARALELFHDMIAAGV-KPNDVTYIAVLSACSH 569
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 1/146 (0%)
Query: 23 DFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGK 82
D+ + I T+ LISA +S+ L G+++H L + D + N +++MY +
Sbjct: 444 DYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSR 503
Query: 83 CGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI 142
CG L DA FD+M NV+SWT+MI+G +++ A++L+ M+ +GV P T+ ++
Sbjct: 504 CGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAV 563
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHG 168
+ ACS G V G++ H +++ HG
Sbjct: 564 LSACSHAGLVKEGKE-HFRMMQKHHG 588
>gi|296087156|emb|CBI33530.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/482 (32%), Positives = 258/482 (53%), Gaps = 42/482 (8%)
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
F I++ C+ G + G +H +++K ++ N L+++Y KF I A +F +
Sbjct: 62 FSQILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAHQLFDTMP 121
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-------- 250
R+DV S+ +MI+A + Y+ L + +PN F + AC
Sbjct: 122 RRDVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRLRG 181
Query: 251 ------------------------FARIL--------FNEIDSPDLASWNALIAGVASHS 278
+A+ + FNEI DL SWN +I G A ++
Sbjct: 182 IFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNN 241
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
+ A+ +FS+M + DG T+ S++ C L GMQ H IK+G P+ N
Sbjct: 242 SKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYN 301
Query: 339 AILTMYAKCSV-LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
A++TMY+KC + + + +F + + + +SW ++I+ +Q+ Q EE LF ML +
Sbjct: 302 ALITMYSKCEKGVASPVKIFGSISE-PNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGV 360
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
+ + +F+ ++ +A+LE Q+H I K+ D+ V N L+D+Y KCGSL A
Sbjct: 361 RENDFSFSSILPVYGNLANLEQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGSLEDAHL 420
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
+F M DVVS +++I+ Y Q G G EAL++ M+S G+ P+ VT +G L ACSH GL
Sbjct: 421 VFMKMGKHDVVSCTTMIMSYGQHGKGKEALEILAEMKSEGLVPDGVTFLGCLYACSHGGL 480
Query: 518 VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
VEEG+ +++IM ++ + P REH +CVVD+L RAG ++EAE+FI++M ++D++VW++LL
Sbjct: 481 VEEGVRVFKIMIEDHNLKPKREHFACVVDMLGRAGRLNEAENFIDEMGIESDVLVWETLL 540
Query: 578 AS 579
+
Sbjct: 541 GA 542
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 217/481 (45%), Gaps = 46/481 (9%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
++ ++ C+ L+ G VH +++ +++ N +L++Y K G + A FD MP
Sbjct: 62 FSQILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAHQLFDTMP 121
Query: 98 QRNVVSWTAMI-AGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R+VVS+ MI A NY D + LY +M + V P TF +I AC GL ++ L
Sbjct: 122 RRDVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRLRG 181
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
HAH ++ S+ ++L+ Y K ++ DA F+ I D+ SW MI ++
Sbjct: 182 IFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNN 241
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
+ A+ F++ML G + + F S+ CS +
Sbjct: 242 SKEHAVRMFSQML-KGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIY 300
Query: 255 -------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+F I P++ SW A+I+G + EA+ LF EM +
Sbjct: 301 NALITMYSKCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGV 360
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
+ + S+L L QG Q+H+ IIK F ++ V NA++ MY+KC L +A L
Sbjct: 361 RENDFSFSSILPVYGNLANLEQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGSLEDAHL 420
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF ++GK+ D VS ++I + QH + +E + + M + + PD +TF + AC+
Sbjct: 421 VFMKMGKH-DVVSCTTMIMSYGQHGKGKEALEILAEMKSEGLVPDGVTFLGCLYACSHGG 479
Query: 416 SLEM-VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSL 473
+E V I L ++D+ + G L A + M DV+ W +L
Sbjct: 480 LVEEGVRVFKIMIEDHNLKPKREHFACVVDMLGRAGRLNEAENFIDEMGIESDVLVWETL 539
Query: 474 I 474
+
Sbjct: 540 L 540
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 188/424 (44%), Gaps = 49/424 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S+ + N LV +++ T+AGLI AC L +L+L H H +
Sbjct: 129 NTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRLRGIFHAHTV 188
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + + +++ Y K LEDA F+++ + ++VSW MI GC++N + A++
Sbjct: 189 RCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNNSKEHAVR 248
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ QML+ V FT SIIK CS G + G Q H IK NALI MY+
Sbjct: 249 MFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYNALITMYS 308
Query: 183 KFDR-ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K ++ + +F I+ ++ SW +MI+ F + EA+ F EML G + N+F F
Sbjct: 309 KCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGVRE-NDFSF 367
Query: 242 GSV--------------------------------------FSACSNF--ARILFNEIDS 261
S+ +S C + A ++F ++
Sbjct: 368 SSILPVYGNLANLEQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGSLEDAHLVFMKMGK 427
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
D+ S +I H EA+ + +EM+ L+PDG+T L AC + +G++V
Sbjct: 428 HDVVSCTTMIMSYGQHGKGKEALEILAEMKSEGLVPDGVTFLGCLYACSHGGLVEEGVRV 487
Query: 322 HSYIIKMGFDSNVPVCNA----ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
+I+ D N+ ++ M + L A E+G +D + W +++ AC
Sbjct: 488 FKIMIE---DHNLKPKREHFACVVDMLGRAGRLNEAENFIDEMGIESDVLVWETLLGACR 544
Query: 378 QHNQ 381
H +
Sbjct: 545 VHGE 548
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 178/593 (30%), Positives = 289/593 (48%), Gaps = 43/593 (7%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
N I T A ++ ACS + +VH ++ D + + ++ Y CG L
Sbjct: 143 NQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGEL 202
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
+ A +P+R+ VSW A++ G +++ + + +++ SG ++T +++K C
Sbjct: 203 DAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCC 262
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
LG G+ +HA VIK + + + L+ MY++ +A VF I DV
Sbjct: 263 MELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCS 322
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------- 251
+MI+ F + EAL F +M G +PN +IF + S
Sbjct: 323 AMISCFDRHDMAWEALDLFVKMSGMGV-KPNHYIFVGIAGVASRTGDANLCRSVHAYIVK 381
Query: 252 -------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
A + F+ I PD SWN +++ S SN + + +
Sbjct: 382 SGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRI 441
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
F +M + T S+L C + L G QVH+ I+K G ++ V ++ MYA+
Sbjct: 442 FKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQ 501
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
+A LVF++L K D+ SW I++ + +AE++ F ML I+P T
Sbjct: 502 SGCFTSACLVFEQL-KERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAV 560
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
+ C+ MASL QLH + K+G V V L+D+Y+KCG++ A LF+ E D
Sbjct: 561 SLSVCSDMASLGSGLQLHSWAIKSGWNSSV-VSGALVDMYVKCGNIADAEMLFHESETRD 619
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
V+W+++I GY+Q G G +AL F +M G P+ +T VGVL+ACSH GL+ EG ++
Sbjct: 620 QVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFK 679
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + YGI PT EH +C+VD+L++AG + EAE INQM D +W+++L +
Sbjct: 680 SLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGA 732
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 156/588 (26%), Positives = 268/588 (45%), Gaps = 61/588 (10%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+A + C+ R+L+ G+++H +L S PD L + +LNMY KCG L DAR FD MP
Sbjct: 53 HAAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMP 112
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
R++V+WTAMI+ + + A+ ++ +M Q G+ P FT S++KACSG Q
Sbjct: 113 HRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQ 172
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H V+K ++L+ YT + A V G+ + SW +++ +++ G
Sbjct: 173 VHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGD 232
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN--------------------------- 250
+ +++ G + +++ +V C
Sbjct: 233 YRRVMIIIEKLVASGD-EISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNS 291
Query: 251 -----FARIL--------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
++R L F ID PD+ +A+I+ H A EA+ LF +M + P
Sbjct: 292 CLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKP 351
Query: 298 DGLTVHSLLCACIGRLTLYQGMQ----VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ H + G + VH+YI+K GF V +AIL MY K + +A
Sbjct: 352 N----HYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDA 407
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
+ F +L D+ SWN+I++A + E+ R+F +M + T+ V+ C
Sbjct: 408 TVTF-DLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTS 466
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ +L TQ+H I K+GL D V L+D+Y + G SA +F ++ D SW+ +
Sbjct: 467 LMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVI 526
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
+ GYA+ ++ ++ F M + P+ TL L+ CS + + GL L+
Sbjct: 527 MSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWA----- 581
Query: 534 IIPTREHCSCV----VDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
I + + S V VD+ + G + +AE ++ D V W +++
Sbjct: 582 -IKSGWNSSVVSGALVDMYVKCGNIADAEMLFHESET-RDQVAWNTII 627
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 216/476 (45%), Gaps = 44/476 (9%)
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
++ C+ ++ G++LHA +++S ++L+ MY K R++DAR VF G+ +D+
Sbjct: 57 LQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDI 116
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILF------ 256
+W +MI+A + G +AL F M G PN F SV ACS + F
Sbjct: 117 VAWTAMISAHTAAGDSDQALDMFARMNQEG-IAPNGFTLASVLKACSGGSHSKFTHQVHG 175
Query: 257 -----NEIDSPDLAS-----------------------------WNALIAGVASHSNANE 282
N +D P + S WNAL+ G A H +
Sbjct: 176 QVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRR 235
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
M + ++ T+ ++L C+ G VH+ +IK G +++ + + ++
Sbjct: 236 VMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVE 295
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
MY++C A VF + + D V +++I+ +H+ A E LF +M +KP+H
Sbjct: 296 MYSRCLSAEEAYEVFIRIDE-PDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHY 354
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
F + G ++ + +H YI K+G A V + ++++Y+K G++ A F+ +
Sbjct: 355 IFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLI 414
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
PD SW++++ + ++ L++F +M G S N T V VL C+ + + G
Sbjct: 415 HEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGT 474
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++ + G+ + +VD+ A++GC A Q+ + D W +++
Sbjct: 475 QVHACILKS-GLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLK-ERDAFSWTVIMS 528
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 152/316 (48%), Gaps = 23/316 (7%)
Query: 5 YVSSLCKQNLY-NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILL 63
Y S C+Q L + + FS N TY ++ C+SL +L+ G +VH IL
Sbjct: 430 YSGSNCEQGLRIFKQMACEGFSANKY-------TYVSVLRCCTSLMNLRFGTQVHACILK 482
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
S Q D + +++MY + G A + F+++ +R+ SWT +++G ++ + ++
Sbjct: 483 SGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEY 542
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ ML+ + P T + CS + S+ G QLH+ IKS S +++ AL+ MY K
Sbjct: 543 FRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSVVS-GALVDMYVK 601
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
I DA +F +D +W ++I +S+ G+ +AL F +M+ G +P+ F
Sbjct: 602 CGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGK-RPDGITFVG 660
Query: 244 VFSACS-----NFARILFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
V SACS N R F + S P + + ++ ++ EA SL ++M
Sbjct: 661 VLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQM--- 717
Query: 294 ELLPDGLTVHSLLCAC 309
L PD ++L AC
Sbjct: 718 PLAPDSSIWRTILGAC 733
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 188/449 (41%), Gaps = 55/449 (12%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
+ ++ A A D + + ++P+ Y G+ S L R VH +I+ S
Sbjct: 329 DRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLK 388
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ + ILNMY K G+++DA + FD + + + SW +++ ++++ QM
Sbjct: 389 GVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACE 448
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G ++T+ S+++ C+ L ++ G Q+HA ++KS + L+ MY + A
Sbjct: 449 GFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSA 508
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
VF + +D SW +++ ++K + + +F ML +P++ S CS+
Sbjct: 509 CLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLREN-IRPSDATLAVSLSVCSD 567
Query: 251 F---------------------------------------ARILFNEIDSPDLASWNALI 271
A +LF+E ++ D +WN +I
Sbjct: 568 MASLGSGLQLHSWAIKSGWNSSVVSGALVDMYVKCGNIADAEMLFHESETRDQVAWNTII 627
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GF 330
G + H + +A+ F +M D PDG+T +L AC L +G + + + G
Sbjct: 628 CGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGI 687
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AE 383
+ ++ + +K L A + ++ DS W +I+ AC H AE
Sbjct: 688 TPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAE 747
Query: 384 ELFRL-----FSRMLASQIKPDHITFNDV 407
LF L S +L S I D ++DV
Sbjct: 748 RLFELEPHDASSSILLSNIYADLGRWSDV 776
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 183/582 (31%), Positives = 295/582 (50%), Gaps = 42/582 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+ Y+ ++ C+ + LQ G+ VH I + + VL ++ MY CG+L + R FD
Sbjct: 452 NAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDH 511
Query: 96 MPQRN-VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+ N V W M++ ++ ++I L+ +M + G+ +TF I+K + LG V
Sbjct: 512 ILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGE 571
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
+++H V K GS+ N+LIA Y K + A +F + +DV SW SMI+
Sbjct: 572 CKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVM 631
Query: 215 LGYELEALCHFNEML-----------------------------HHG----AYQPNEFIF 241
G+ AL F +ML HG A E +F
Sbjct: 632 NGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMF 691
Query: 242 GS----VFSACSNFARIL--FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+ ++S C N + F ++ + SW +LIA ++A+ LF EM + +
Sbjct: 692 NNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGV 751
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD ++ S+L AC +L +G VH+YI K +PV NA++ MYAKC + A L
Sbjct: 752 SPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYL 811
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF ++ D VSWN++I +++ E +LF+ M + +PD IT ++ AC +A
Sbjct: 812 VFSQI-PVKDIVSWNTMIGGYSKNSLPNEALKLFAEM-QKESRPDGITMACLLPACGSLA 869
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+LE+ +H I + G + ++ V N L+D+Y+KCGSL AR LF+ + D+++W+ +I
Sbjct: 870 ALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMIS 929
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
G G G+EA+ F +MR G+ P+ +T +L ACSH GL+ EG + M +E +
Sbjct: 930 GCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNME 989
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
P EH +C+VDLLAR G + +A + I M D +W +LL
Sbjct: 990 PKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALL 1031
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/445 (30%), Positives = 218/445 (48%), Gaps = 45/445 (10%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N ++ Y K G ++ A FD++ R+VVSW +MI+GC N + A++ ++QML V
Sbjct: 592 NSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVG 651
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
T + + AC+ +GS+ LGR LH +K+ ++ N L+ MY+K + DA
Sbjct: 652 VDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQA 711
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---- 249
F + +K V SW S+IAA+ + G +A+ F EM G P+ + SV AC+
Sbjct: 712 FEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGV-SPDVYSMTSVLHACACGNS 770
Query: 250 --------NFAR----------------------------ILFNEIDSPDLASWNALIAG 273
N+ R ++F++I D+ SWN +I G
Sbjct: 771 LDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGG 830
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
+ +S NEA+ LF+EM+ +E PDG+T+ LL AC L G +H I++ G+ S
Sbjct: 831 YSKNSLPNEALKLFAEMQ-KESRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSE 889
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
+ V NA++ MY KC L +A L+F ++ D ++W +I+ C H E F +M
Sbjct: 890 LHVANALIDMYVKCGSLVHARLLF-DMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMR 948
Query: 394 ASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
+ IKPD ITF ++ AC+ L E + I++ + + ++D+ + G+L
Sbjct: 949 IAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNL 1008
Query: 453 GSARKLFNFME-NPDVVSWSSLILG 476
A L M PD W +L+ G
Sbjct: 1009 SKAYNLIETMPIKPDATIWGALLCG 1033
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 207/450 (46%), Gaps = 68/450 (15%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T ++AC+++ SL LGR +H + + +V+ N +L+MY KCG+L DA F+K
Sbjct: 655 ATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEK 714
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M Q+ VVSWT++IA + +DAI+L+ +M GV P ++ S++ AC+ S+ G
Sbjct: 715 MGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKG 774
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R +H ++ K+ L NAL+ MY K + +A VFS I KD+ SW +MI +SK
Sbjct: 775 RDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKN 834
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
EAL F EM +P+ + AC +
Sbjct: 835 SLPNEALKLFAEMQKES--RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHV 892
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR+LF+ I DL +W +I+G H NEA++ F +MR +
Sbjct: 893 ANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGI 952
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG---FDSNVPVCN---------AILTM 343
PD +T S+L AC HS ++ G F+S + CN ++ +
Sbjct: 953 KPDEITFTSILYAC-----------SHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDL 1001
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
A+ L A + + + D+ W +++ C H+ E ++ + +++PD+
Sbjct: 1002 LARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVF--ELEPDNAG 1059
Query: 404 FNDVMGAC-AKMASLEMVTQLHCYITKTGL 432
+ ++ A+ E V +L I K GL
Sbjct: 1060 YYVLLANIYAEAEKWEEVKKLRERIGKRGL 1089
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 130/280 (46%), Gaps = 10/280 (3%)
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
S+L C L +G VHS I G + ++ MY C L +F + +
Sbjct: 456 SILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSD 515
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
WN +++ + E LF +M I + TF+ ++ A + + ++
Sbjct: 516 NKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRI 575
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H + K G V+N L+ Y K G + SA KLF+ + + DVVSW+S+I G G
Sbjct: 576 HGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFS 635
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP--TRE-- 539
AL+ F +M L V +L TLV + AC++VG L L R + + G+ +RE
Sbjct: 636 HSALEFFVQMLILRVGVDLATLVNSVAACANVG----SLSLGRALHGQ-GVKACFSREVM 690
Query: 540 HCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++D+ ++ G +++A +M +V W SL+A+
Sbjct: 691 FNNTLLDMYSKCGNLNDAIQAFEKMG-QKTVVSWTSLIAA 729
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 272/528 (51%), Gaps = 47/528 (8%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FD++ + W ++ +++ + +I L+ +M+ SGV +TF + K+ S L SV
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G QLH ++KS G N+L+A Y K R+ AR VF + +DV SW S+I +
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------- 251
G + L F +ML G + + SVF+ C++
Sbjct: 121 VSNGLAEKGLSVFVQMLVSG-IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 179
Query: 252 -------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
A+ +F E+ + S+ ++IAG A A EA+ LF EM +
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 239
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK--MGFDSNVPVCNAILTMYAKCSVL 350
+ PD TV ++L C L +G +VH +I + +GFD + V NA++ MYAKC +
Sbjct: 240 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD--IFVSNALMDMYAKCGSM 297
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ-IKPDHITFNDVMG 409
A LVF E+ + D +SWN+II ++ A E LF+ +L + PD T V+
Sbjct: 298 QEAELVFSEM-RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 356
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
ACA +++ + ++H YI + G D V N L+D+Y KCG+L A LF+ + + D+VS
Sbjct: 357 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 416
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+ +I GY G G EA+ LF +MR G+ + ++ V +L ACSH GLV+EG + IM
Sbjct: 417 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 476
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+E I PT EH +C+VD+LAR G + +A FI M D +W +LL
Sbjct: 477 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALL 524
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 141/522 (27%), Positives = 245/522 (46%), Gaps = 69/522 (13%)
Query: 14 LYNEALVAYDFSQN--------NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
L NE + DFS + ++ + + T++ + + SSLRS+ G ++H IL S
Sbjct: 15 LMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSG 74
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ N ++ Y K ++ AR FD+M +R+V+SW ++I G N + +++
Sbjct: 75 FGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFV 134
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
QML SG+ T S+ C+ + LGR +H+ +K+ N L+ MY+K
Sbjct: 135 QMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCG 194
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A+ VF ++ + V S+ SMIA +++ G EA+ F EM G P+ + +V
Sbjct: 195 DLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG-ISPDVYTVTAVL 253
Query: 246 SACSNF----------------------------------------ARILFNEIDSPDLA 265
+ C+ + A ++F+E+ D+
Sbjct: 254 NCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDII 313
Query: 266 SWNALIAGVASHSNANEAMSLFS-EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
SWN +I G + + ANEA+SLF+ + ++ PD TV +L AC +G ++H Y
Sbjct: 314 SWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGY 373
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
I++ G+ S+ V N+++ MYAKC L A ++F ++ + D VSW +IA H +E
Sbjct: 374 IMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHGFGKE 432
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM------VTQLHCYITKTGLAFDVFV 438
LF++M + I+ D I+F ++ AC+ ++ + + C I T + V
Sbjct: 433 AIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 492
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMEN----PDVVSWSSLILG 476
D+ + G L K + F+EN PD W +L+ G
Sbjct: 493 -----DMLARTGDL---IKAYRFIENMPIPPDATIWGALLCG 526
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 209/446 (46%), Gaps = 44/446 (9%)
Query: 29 TNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
+ I I +T + + C+ R + LGR VH + + + N +L+MY KCG L+
Sbjct: 139 SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDS 198
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A+ F +M R+VVS+T+MIAG ++ +A+KL+ +M + G+ P +T +++ C+
Sbjct: 199 AKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR 258
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+ G+++H + +++ G + NAL+ MY K + +A VFS + KD+ SW ++
Sbjct: 259 YRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTI 318
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------ 250
I +SK Y EAL FN +L + P+E V AC++
Sbjct: 319 IGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 378
Query: 251 ----------------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
A +LF++I S DL SW +IAG H EA++LF+
Sbjct: 379 YFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFN 438
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAILTMYAKC 347
+MR + D ++ SLL AC + +G + + + + + V I+ M A+
Sbjct: 439 QMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLART 498
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
L A + + D+ W +++ C H+ + ++ ++ +++P++ + +
Sbjct: 499 GDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVF--ELEPENTGYYVL 556
Query: 408 MGAC-AKMASLEMVTQLHCYITKTGL 432
M A+ E V +L I + GL
Sbjct: 557 MANIYAEAEKWEQVKRLRKRIGQRGL 582
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 160/317 (50%), Gaps = 20/317 (6%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILL 63
++ ++ L EA+ ++ + I P Y +++ C+ R L G++VH+ I
Sbjct: 218 IAGYAREGLAGEAVKLFEEMEEEG---ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 274
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
+ D+ + N +++MY KCGS+++A + F +M ++++SW +I G S+N N+A+ L
Sbjct: 275 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSL 334
Query: 124 YIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ +L+ P + T ++ AC+ L + GR++H +++++ + S N+L+ MY
Sbjct: 335 FNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 394
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K +L A +F IA KD+ SW MIA + G+ EA+ FN+M G + +E F
Sbjct: 395 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG-IEADEISFV 453
Query: 243 SVFSACSN---------FARILFNEID-SPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
S+ ACS+ F I+ +E P + + ++ +A + +A M
Sbjct: 454 SLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM-- 511
Query: 293 RELLPDGLTVHSLLCAC 309
+ PD +LLC C
Sbjct: 512 -PIPPDATIWGALLCGC 527
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 81/153 (52%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + K NEAL ++ T A ++ AC+SL + GR++H +I+
Sbjct: 316 NTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIM 375
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D + N +++MY KCG+L A M FD + +++VSWT MIAG + +AI
Sbjct: 376 RNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIA 435
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
L+ QM Q+G+ + +F S++ ACS G V G
Sbjct: 436 LFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 468
>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
Length = 806
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 180/584 (30%), Positives = 293/584 (50%), Gaps = 51/584 (8%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
I AC ++ L GR +H + + + +Q+ ++ MY +CG ++ A FD +
Sbjct: 158 IVACGRIKDLAQGRSIHYRVATGRG-INSSIQSALVTMYAQCGRIDLAMAAFDDNRELGT 216
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
W A+++ + AI+L+ QM Q + + AC+ G + G Q+H
Sbjct: 217 APWNAIMSALAGAGHHRRAIELFFQMEQHQC--SDRSCAIALGACAAAGHLRGGIQIHDK 274
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
+ HG+ ++ NALI+MY + ++ +A VF+ + ++V SW SMIAA ++ G+ A
Sbjct: 275 IQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFA 334
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------------ 251
+ F+ M+ G PNE + SV SA ++
Sbjct: 335 VKLFDGMIAEG-INPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNS 393
Query: 252 -------------ARILFNEI--DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR +F+ I +S + S+ +IA A + + +A+ +F EM R +
Sbjct: 394 LINMYARSGLLAEAREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVA 453
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC-NAILTMYAKCSVLCNALL 355
P+ +T ++L AC+ L G +H +I+ G DS+ P N+++ MYAKC L A
Sbjct: 454 PNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAAR 513
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF+ + K D V+W +IIAA +Q L+ RML S I PD T + ++ ACA +
Sbjct: 514 VFETM-KTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLG 572
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
L M ++H ++ L D N L +Y KCGSL A +L+ DV +W+S++
Sbjct: 573 DLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLA 632
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
++Q G AL+L+ M S GV PN VT + VL +CS GLV EG + + ++YG
Sbjct: 633 AHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQ 692
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P+ EH C+VD+L RAG + +AE+ ++ M D + W+SLL+S
Sbjct: 693 PSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSS 736
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 155/585 (26%), Positives = 271/585 (46%), Gaps = 47/585 (8%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
YA L+ C + R+L GR+VH HI+ + + +L + MY +C + A FD MP
Sbjct: 53 YANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMP 112
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
R W ++ + D ++LY +M P F I AC + + GR
Sbjct: 113 DRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRS 172
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H + + + G + Q+AL+ MY + RI A F W ++++A + G+
Sbjct: 173 IH-YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGH 231
Query: 218 ELEALCHFNEMLHH---------------------GAYQPNEFIFG-------------- 242
A+ F +M H G Q ++ I
Sbjct: 232 HRRAIELFFQMEQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALI 291
Query: 243 SVFSACSNFARIL--FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
S++ C L F ++ ++ SW ++IA VA + + A+ LF M + P+
Sbjct: 292 SMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGINPNEK 351
Query: 301 TVHSLLCAC--IGR-LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
T S++ A +GR L +G ++HS I G D++ V N+++ MYA+ +L A VF
Sbjct: 352 TYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVF 411
Query: 358 KELGKNADS-VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
+ +N+ + VS+ ++IAA + + +F M A + P+ ITF V+ AC +
Sbjct: 412 DSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGD 471
Query: 417 LEMVTQLHCYITKTGL-AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
L +H + ++GL + D F N L+D+Y KCG LG A ++F M+ D+V+W+++I
Sbjct: 472 LASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIA 531
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
Q G AL L+ RM G+ P++ TL +L AC+++G + G ++R + +
Sbjct: 532 ANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHR--QALRSKL 589
Query: 536 PTREHC-SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
H + + + A+ G + +A + +D+ W S+LA+
Sbjct: 590 EQDAHFQNALAAMYAKCGSLEKATRLYRRCR-GSDVATWTSMLAA 633
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 179/394 (45%), Gaps = 48/394 (12%)
Query: 37 TYAGLISACSSLRS---LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
TYA ++SA + L L GRK+H I S D ++QN ++NMY + G L +AR F
Sbjct: 352 TYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVF 411
Query: 94 DKMPQ--RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
D + + + VVS+T MIA + N A++++ +M GV P + TF +++ AC +G
Sbjct: 412 DSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGD 471
Query: 152 VCLGRQLHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ G +H +I+S S A N+L+ MY K + A VF + KD+ +W ++IA
Sbjct: 472 LASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIA 531
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------- 251
A + G AL ++ ML G + P+ ++ AC+N
Sbjct: 532 ANVQSGNNRAALDLYDRMLQSGIH-PDIATLSTLLVACANLGDLAMGEKIHRQALRSKLE 590
Query: 252 ---------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
A L+ D+A+W +++A + A+ A+ L++EM
Sbjct: 591 QDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEM 650
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYAKCSV 349
+ P+ +T +L +C + +G + HS G + ++ + +
Sbjct: 651 ESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRAGK 710
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L +A + + D ++W S++++C H AE
Sbjct: 711 LRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAE 744
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 98/179 (54%), Gaps = 4/179 (2%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T + L+ AC++L L +G K+H L SK + D QN + MY KCGSLE A + +
Sbjct: 559 ATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRR 618
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+V +WT+M+A SQ + A++LY +M GV P + TF ++ +CS G V G
Sbjct: 619 CRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEG 678
Query: 156 RQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAA 211
R+ H I S++GS A++ ++ + + ++ DA + + D +W S++++
Sbjct: 679 REFF-HSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSS 736
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/127 (18%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
+ + +++ C +L+ ++H +I LA + + + +Y +C +A LF+
Sbjct: 51 LLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDA 110
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
M + W+ L+ + + L+L+ RM P+ + + AC + + +G
Sbjct: 111 MPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQG 170
Query: 522 LHL-YRI 527
+ YR+
Sbjct: 171 RSIHYRV 177
>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 752
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 176/582 (30%), Positives = 292/582 (50%), Gaps = 44/582 (7%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+ LI R LG+ VH +++ + Q D N++LN+Y K L+ A+ FD+M
Sbjct: 70 WPELIKISIGSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMR 129
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
RN ++WT++I G ++ A + M + G + T I++ACS LG Q
Sbjct: 130 TRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQ 189
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H VIKS ++ +LIAMYTK A VF + KD+ MI + + G
Sbjct: 190 IHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGN 249
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------------------- 249
+A+ F +L+ G ++P ++ F ++ S C+
Sbjct: 250 GGKAIEVFKNLLNDG-FEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGN 308
Query: 250 ------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
A +F+ + +L SW ALI+G + +A+ F + D +
Sbjct: 309 AIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGIN 368
Query: 298 -DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
D + ++L C L G+Q+H +++K+G +V V A++ +YAKC L +A +V
Sbjct: 369 FDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIV 428
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEE-LFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
F L N S+N+I+A L+ + EE LF+++ + +KPD +TF+ ++ A A
Sbjct: 429 FDHLS-NKGIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQA 487
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
SLE H Y KTG ++ V N ++ +Y KCGS+ A ++FN M D +SW++LI
Sbjct: 488 SLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALIS 547
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
YA G ++L LF M+ G P+ T++ +L AC++ GL ++G+ L+ +ME +YGI
Sbjct: 548 AYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKDGICLFNLMEPKYGIK 607
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
P EH +C+ DLL RAG + EA D I + ++W++L+
Sbjct: 608 PLLEHYACMADLLGRAGYLSEAMDIIKRSPFPKSTLLWRTLV 649
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 127/245 (51%), Gaps = 2/245 (0%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + +A+ A+ + I + ++ CS +L+LG ++H ++
Sbjct: 342 ISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLG 401
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG-CSQNYQENDAIKLY 124
C DV + ++++Y KC L+ AR+ FD + + + S+ A++AG + E D + L+
Sbjct: 402 CACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILF 461
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
Q+ +GV P TF ++ + S+ GR HA+ +K+ +++ N++I+MY K
Sbjct: 462 NQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKC 521
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
I DA +F+ + +D SW ++I+A++ G ++L F EM G + P+EF ++
Sbjct: 522 GSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKG-FDPDEFTILAI 580
Query: 245 FSACS 249
AC+
Sbjct: 581 LQACT 585
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 76/128 (59%), Gaps = 6/128 (4%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++P T++ L+S ++ SL+ GR H + + + ++ + N +++MY KCGS+EDA
Sbjct: 469 VKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAH 528
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC--SG 148
F+ M R+ +SW A+I+ + + Q ++ L+ +M + G P +FT +I++AC SG
Sbjct: 529 QMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSG 588
Query: 149 L--GSVCL 154
L +CL
Sbjct: 589 LWKDGICL 596
>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 729
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 178/612 (29%), Positives = 303/612 (49%), Gaps = 53/612 (8%)
Query: 12 QNLYNEALVAYDFSQN-NTNIRIRPSTYAGLISA---------CSSLRSLQLGRKVHDHI 61
QN + ALV F Q N+ T++ LI A C S +LQ R++
Sbjct: 26 QNATSPALVI--FRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQ-ARQIQTQC 82
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
L + + ++++Y K G AR FD+M R+VVSW +I G SQN AI
Sbjct: 83 LKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAI 142
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG--SHLIAQNALIA 179
+L++ ML+ P Q T S++ +C + GR +H IK+ G SHL NAL++
Sbjct: 143 QLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHL--NNALMS 200
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY K D + ++ +F + K V SW +MI + + G +A+ +F EML G + P+
Sbjct: 201 MYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEG-FHPSSV 259
Query: 240 IFGSVFSA----------------------------------CSNFARILFNEIDSPDLA 265
++ SA +N A+ L+ + DL
Sbjct: 260 TIMNLVSANAFPENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLI 319
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
+ A+I+ + + A+ F + ++ PD + + +L G H Y
Sbjct: 320 TLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYG 379
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
+K G ++ V N ++++Y++ + AL +F ++ + ++WNS+I+ C+Q ++ +
Sbjct: 380 VKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDM-REKPLITWNSMISGCVQAGKSSDA 438
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
LFS M KPD IT ++ C ++ +L + LH YI + + + F+ L+D+
Sbjct: 439 MELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDM 498
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y KCG L A K+F +++P + +W+++I GY+ +G A +++++ G+ P+ +T
Sbjct: 499 YSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITF 558
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
+GVL AC+H GLV GL + IM EYG++P+ +H +C+V LL + G EA +FIN+M
Sbjct: 559 LGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINKME 618
Query: 566 CDADIVVWKSLL 577
D VW +LL
Sbjct: 619 IQPDSAVWGALL 630
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 142/291 (48%), Gaps = 16/291 (5%)
Query: 31 IRIRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
+ I+P A G++ ++ +G H + + S D ++ N ++++Y + +E
Sbjct: 347 LDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEA 406
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A F M ++ +++W +MI+GC Q + +DA++L+ +M G P T S++ C
Sbjct: 407 ALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQ 466
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
LG++ +G LH++++++ ALI MY+K R+ A VF I + +W ++
Sbjct: 467 LGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAI 526
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS-- 261
I+ +S G E A ++++ G +P++ F V +AC++ + FN +
Sbjct: 527 ISGYSLYGLEHTAFGCYSKLQEQGL-KPDKITFLGVLAACTHGGLVYLGLEYFNIMTKEY 585
Query: 262 ---PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
P L + ++A + EA+ ++M E+ PD +LL AC
Sbjct: 586 GLMPSLQHYACIVALLGKEGLFKEAIEFINKM---EIQPDSAVWGALLNAC 633
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 146/326 (44%), Gaps = 22/326 (6%)
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL------ 315
P+L+ +++L S A+ +F ++ + P+ T L+ A + +
Sbjct: 16 PNLSLFHSLFQNATS-----PALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPST 70
Query: 316 --YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
Q Q+ + +K G + + V +++ +Y K +A +F ++ D VSWN +I
Sbjct: 71 AALQARQIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYR-DVVSWNVLI 129
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
Q+ +LF ML KP+ T ++ +C + +H + K G
Sbjct: 130 CGYSQNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFG 189
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
D + N LM +Y KC L +++ LF+ M+ VVSW+++I Y Q G D+A+ F M
Sbjct: 190 LDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEM 249
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
G P+ VT++ +++A + E +H Y + + G + +V L A+ G
Sbjct: 250 LKEGFHPSSVTIMNLVSANA----FPENVHCYVV---KCGFTNDASVVTSLVCLYAKQGF 302
Query: 554 VHEAEDFINQMACDADIVVWKSLLAS 579
+ A+ D++ ++++S
Sbjct: 303 TNTAKQLYKYYP-TKDLITLTAIISS 327
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 182/624 (29%), Positives = 307/624 (49%), Gaps = 48/624 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +SS + LY+ L + + + T+ ++ AC+ + +Q+G VH ++
Sbjct: 152 NAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVV 211
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ DV + N +++ YG GS+ DA F MP+RN+VSW +MI S N +
Sbjct: 212 KTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFL 271
Query: 123 LYIQMLQS----GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
L QM++ P T +++ C+ + +G+ +H +K ++ NAL+
Sbjct: 272 LLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALM 331
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG---------------------- 216
MY+K I DA+ +F K+V SW +M+ FS G
Sbjct: 332 DMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRAD 391
Query: 217 -----------YELEALCHFNEM---------LHHGAYQPNEFIFGSVFSACSNFARILF 256
+E L + E+ +H+ N F+ ++A +F
Sbjct: 392 EVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVF 451
Query: 257 NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
I S + SWNALI G + S+ ++ + +M+ LLPD TV SLL AC +L
Sbjct: 452 CSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLK 511
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
G +VH II+ + + V ++L++Y C L A ++F + ++ VSWN+++
Sbjct: 512 LGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAM-EDKTLVSWNTMVNGY 570
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
LQ+ E LF +M+ ++P I+ V GAC+ + SL + + H Y K L +
Sbjct: 571 LQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNA 630
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
F+ ++D+Y K GS+ + K+FN ++ V SW+++++GY G EA+KLF M+
Sbjct: 631 FIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRT 690
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
G P+ +T +GVLTAC+H GLV EGL M+ +G+ PT +H +CV+D+L RAG + E
Sbjct: 691 GHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDE 750
Query: 557 AEDF-INQMACDADIVVWKSLLAS 579
A +M+ + + +W LL+S
Sbjct: 751 ALKIATEEMSEEPGVGIWNFLLSS 774
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 159/587 (27%), Positives = 284/587 (48%), Gaps = 61/587 (10%)
Query: 44 ACSSLRSLQLGRKVHDHILLS-KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVV 102
A + +QLGRK+H + S + D VL ++ MY CGS +D+R FD + ++N+
Sbjct: 90 ASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLF 149
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
W A+I+ S+N ++ ++++++M+ +SG++P FTF ++KAC+G+ V +G +H
Sbjct: 150 QWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGL 209
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
V+K+ + NAL++ Y + DA VF + +++ SW SMI FS G E
Sbjct: 210 VVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEEC 269
Query: 222 LCHFNEMLHHG---AYQPNEFIFGSVFSACS----------------------------- 249
+M+ A+ P+ +V C+
Sbjct: 270 FLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNA 329
Query: 250 -----------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM--RDRELL 296
N A+++F ++ ++ SWN ++ G ++ + ++ L +M +L
Sbjct: 330 LMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLR 389
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF-DSNVPVCNAILTMYAKCSVLCNALL 355
D +T+ + + C L ++H Y +K F +N V NA + YAKC L A
Sbjct: 390 ADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHR 449
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF + ++ SWN++I Q + + +M +S + PD T ++ AC+++
Sbjct: 450 VFCSI-RSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIK 508
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
SL++ ++H I + L D FV L+ +YI CG L +A LF+ ME+ +VSW++++
Sbjct: 509 SLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVN 568
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS-----HVGLVEEGLHLYRIMEN 530
GY Q G + AL LF +M GV P ++++ V ACS +G G L ++E+
Sbjct: 569 GYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLED 628
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
I CS V+D+ A+ G V E+ N + + + W +++
Sbjct: 629 NAFIA-----CS-VIDMYAKNGSVMESFKVFNGLK-ERSVASWNAMV 668
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 179/399 (44%), Gaps = 51/399 (12%)
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
++ N + Y KCGSL A F + + V SW A+I G SQ+ ++ Y QM S
Sbjct: 429 LVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSS 488
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G++P FT S++ ACS + S+ LG+++H +I++ +L+++Y + A
Sbjct: 489 GLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTA 548
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
+F + K + SW +M+ + + G+ AL F +M+ +G QP E SVF ACS
Sbjct: 549 HVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGV-QPCEISMMSVFGACSL 607
Query: 251 FARI----------------------------------------LFNEIDSPDLASWNAL 270
+ +FN + +ASWNA+
Sbjct: 608 LPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAM 667
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-- 328
+ G H A EA+ LF EM+ PD LT +L AC +++G+ +Y+ +M
Sbjct: 668 VMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGL---TYLDQMKT 724
Query: 329 --GFDSNVPVCNAILTMYAKCSVLCNAL-LVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
G + + ++ M + L AL + +E+ + WN ++++C H E
Sbjct: 725 LFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMG 784
Query: 386 FRLFSRMLASQI-KPD-HITFNDVMGACAKMASLEMVTQ 422
++ +++ S+ KP+ ++ +++ K + V Q
Sbjct: 785 EKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQ 823
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 142/278 (51%), Gaps = 19/278 (6%)
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPV-CNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
R + G ++H + + SN V C ++TMY+ C ++ VF L K + WN
Sbjct: 94 RKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKK-NLFQWN 152
Query: 371 SIIAACLQHNQAEELFRLFSRMLA-SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
++I++ ++ + +F +M+ S + PD+ TF V+ ACA ++ +++ +H + K
Sbjct: 153 AVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVK 212
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
T L DVFV N L+ Y GS+ A ++F M ++VSW+S+I ++ G +E L
Sbjct: 213 TRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLL 272
Query: 490 FTRM----RSLGVSPNLVTLVGVLTACSH-----VGLVEEGLHLYRIMENEYGIIPTREH 540
+M + +P++ TL VL C+ VG GL + ++ E +
Sbjct: 273 LGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVV------ 326
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++D+ ++ GC+++A+ I ++ + ++V W +++
Sbjct: 327 NNALMDMYSKCGCINDAQ-VIFKLNNNKNVVSWNTMVG 363
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 261/500 (52%), Gaps = 44/500 (8%)
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+K + M++S V Q TF ++ + S+ LG+Q+H +K L N+LI M
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K + AR VF ++ +D+ SW S+IA ++ G E+EA+C F ++L G +P+++
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG-LKPDQYT 418
Query: 241 FGSVFSACSNF-----------------------------------------ARILFNEI 259
SV A S+ A ILF E
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ER 477
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
+ DL +WNA++AG + ++ + LF+ M + D T+ ++ C + QG
Sbjct: 478 HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
QVH+Y IK G+D ++ V + IL MY KC + A F + D V+W ++I+ C+++
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI-PVPDDVAWTTMISGCIEN 596
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+ E F +FS+M + PD T + A + + +LE Q+H K D FV
Sbjct: 597 GEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG 656
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
L+D+Y KCGS+ A LF +E ++ +W+++++G AQ G G E L+LF +M+SLG+
Sbjct: 657 TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIK 716
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
P+ VT +GVL+ACSH GLV E R M +YGI P EH SC+ D L RAG V +AE+
Sbjct: 717 PDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAEN 776
Query: 560 FINQMACDADIVVWKSLLAS 579
I M+ +A ++++LLA+
Sbjct: 777 LIESMSMEASASMYRTLLAA 796
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 152/564 (26%), Positives = 264/564 (46%), Gaps = 37/564 (6%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+ G + + L LG+ H IL + P+ L N++++MY KCGSL AR FDKMP
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 98 QRNVVSWTAMIAGCSQNYQ---EN--DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
R++VSW +++A +Q+ + EN A L+ + Q V + T ++K C G V
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
H + K AL+ +Y KF ++ + + +F + +DV W M+ A+
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSP---------D 263
++G++ EA+ + H PNE + ARI ++ D+ D
Sbjct: 222 LEMGFKEEAI-DLSSAFHSSGLNPNEITLRLL-------ARISGDDSDAGQVKSFANGND 273
Query: 264 LASWNALI---AGVASHSNANEAMSL---FSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
+S + +I G++ + ++ + +L F++M + ++ D +T +L + +L
Sbjct: 274 ASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLAL 333
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G QVH +K+G D + V N+++ MY K A VF + + D +SWNS+IA
Sbjct: 334 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSER-DLISWNSVIAGIA 392
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS-LEMVTQLHCYITKTGLAFDV 436
Q+ E LF ++L +KPD T V+ A + + L + Q+H + K D
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS 452
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
FV L+D Y + + A LF N D+V+W++++ GY Q G + LKLF M
Sbjct: 453 FVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQ 511
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCV 554
G + TL V C + + +G +H Y I + G S ++D+ + G +
Sbjct: 512 GERSDDFTLATVFKTCGFLFAINQGKQVHAYAI---KSGYDLDLWVSSGILDMYVKCGDM 568
Query: 555 HEAEDFINQMACDADIVVWKSLLA 578
A+ + + D V W ++++
Sbjct: 569 SAAQFAFDSIPVPDD-VAWTTMIS 591
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 203/417 (48%), Gaps = 44/417 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +++ + SL LG++VH L + + N ++NMY K AR FD M
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS-VCLG 155
+R+++SW ++IAG +QN E +A+ L++Q+L+ G+ P Q+T S++KA S L + L
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLS 436
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+Q+H H IK + S ALI Y++ +R + + D+ +W +M+A +++
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSR-NRCMKEAEILFERHNFDLVAWNAMMAGYTQ- 494
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------------- 249
++ ++H + ++F +VF C
Sbjct: 495 SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWV 554
Query: 250 --------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+ A+ F+ I PD +W +I+G + A +FS+MR +
Sbjct: 555 SSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGV 614
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
LPD T+ +L A L QG Q+H+ +K+ ++ V +++ MYAKC + +A
Sbjct: 615 LPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYC 674
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
+FK + + + +WN+++ QH + +E +LF +M + IKPD +TF V+ AC+
Sbjct: 675 LFKRI-EMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 118/214 (55%), Gaps = 1/214 (0%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T A + C L ++ G++VH + + S D+ + + IL+MY KCG + A+ FD +
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 578
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P + V+WT MI+GC +N +E A ++ QM GV+P +FT ++ KA S L ++ GR
Sbjct: 579 PVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGR 638
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+HA+ +K + +L+ MY K I DA +F I ++T+W +M+ ++ G
Sbjct: 639 QIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHG 698
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
E L F +M G +P++ F V SACS+
Sbjct: 699 EGKETLQLFKQMKSLG-IKPDKVTFIGVLSACSH 731
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 184/411 (44%), Gaps = 48/411 (11%)
Query: 33 IRPSTYA--GLISACSSL-RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
++P Y ++ A SSL L L ++VH H + D + +++ Y + +++A
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA 471
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
+ F++ ++V+W AM+AG +Q++ + +KL+ M + G FT ++ K C L
Sbjct: 472 EILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFL 530
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
++ G+Q+HA+ IKS + L + ++ MY K + A+ F I D +W +MI
Sbjct: 531 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMI 590
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA---------------------C 248
+ + G E A F++M G P+EF ++ A C
Sbjct: 591 SGCIENGEEERAFHVFSQMRLMGVL-PDEFTIATLAKASSCLTALEQGRQIHANALKLNC 649
Query: 249 SN-----------FAR--------ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
+N +A+ LF I+ ++ +WNA++ G+A H E + LF +
Sbjct: 650 TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQ 709
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCS 348
M+ + PD +T +L AC + + + + S G + + + +
Sbjct: 710 MKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAG 769
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
++ A + + + A + + +++AAC E R+ +++L +++P
Sbjct: 770 LVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLL--ELEP 818
>gi|357119036|ref|XP_003561252.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71490-like [Brachypodium distachyon]
Length = 692
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 166/486 (34%), Positives = 274/486 (56%), Gaps = 44/486 (9%)
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
+ + +I+ C ++ A+ Y QM +S V+P FT+ S+++AC+ G + LGR +H H
Sbjct: 128 LPYNILISSCLRHGFPRHALAAYQQMARSAVLPDAFTYPSVLRACAEAGDLALGRAVHLH 187
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
+ + G HL QNAL++MY K ++ AR VF G+A+KDV SW SMI+A+ +G ++A
Sbjct: 188 GLATGVGGHLFFQNALVSMYAKSGDLVAARKVFEGMAQKDVVSWNSMISAYVAVGQWVQA 247
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNAN 281
+ F M A E++S +WN IAGV ++ +
Sbjct: 248 VELFERMRAEEA------------------------EVNS---VTWNT-IAGVYINTRDH 279
Query: 282 EA-MSLFSEMRDRELLPDG-------LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
A + L RE++ DG L + S C+ +G L L G ++H ++M D
Sbjct: 280 RAAVGLI-----REMVSDGAAVDFVTLVIGSNACSRVGWLRL--GKEIHGLAVRMNCDGV 332
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
V NA++TMYA+C + +A L+FK L V+WN++IA+ ++AEE RL M+
Sbjct: 333 ESVANALITMYARCKHMDSACLLFKMLACPG-VVTWNTMIASFALSDEAEEASRLVHEMV 391
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
+ ++P+++T ++ CA++A+L+ +LH +I K G + N L+D+Y K G L
Sbjct: 392 GAGVQPNYVTVVTLLALCARVANLQHGQELHSHIVKNGFKGYRLLWNSLIDMYSKSGXLS 451
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
A+ +F+ M++ D++S++ +I GY G G AL+LF +M G+ P+ +++V VL+ACS
Sbjct: 452 VAQNVFDTMDDRDMISYTXMIAGYGMQGKGTIALRLFDQMIDSGIKPDHISMVTVLSACS 511
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
H GLV EG L+ M + YGI P EH SC+VDL AR+G + +AE +N+ + ++W
Sbjct: 512 HSGLVTEGEKLFDKMTSSYGIKPQMEHYSCMVDLYARSGLLEKAEGMLNESSSPPTSMMW 571
Query: 574 KSLLAS 579
+L+ +
Sbjct: 572 AALVGA 577
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 136/605 (22%), Positives = 231/605 (38%), Gaps = 133/605 (21%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N +SS + AL AY Q + P TY ++ AC+ L LGR VH H
Sbjct: 131 NILISSCLRHGFPRHALAAY---QQMARSAVLPDAFTYPSVLRACAEAGDLALGRAVHLH 187
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
L + + QN +++MY K G L AR F+ M Q++VVSW +MI+ Q A
Sbjct: 188 GLATGVGGHLFFQNALVSMYAKSGDLVAARKVFEGMAQKDVVSWNSMISAYVAVGQWVQA 247
Query: 121 IKLYIQMLQSGVMPGQFTFGSII-----------------------------------KA 145
++L+ +M T+ +I A
Sbjct: 248 VELFERMRAEEAEVNSVTWNTIAGVYINTRDHRAAVGLIREMVSDGAAVDFVTLVIGSNA 307
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
CS +G + LG+++H ++ NALI MY + + A +F +A V +W
Sbjct: 308 CSRVGWLRLGKEIHGLAVRMNCDGVESVANALITMYARCKHMDSACLLFKMLACPGVVTW 367
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------- 254
+MIA+F+ EA +EM+ G QPN ++ + C+ A +
Sbjct: 368 NTMIASFALSDEAEEASRLVHEMVGAGV-QPNYVTVVTLLALCARVANLQHGQELHSHIV 426
Query: 255 -----------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMS 285
+F+ +D D+ S+ +IAG A+
Sbjct: 427 KNGFKGYRLLWNSLIDMYSKSGXLSVAQNVFDTMDDRDMISYTXMIAGYGMQGKGTIALR 486
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMY 344
LF +M D + PD +++ ++L AC + +G ++ + G + + ++ +Y
Sbjct: 487 LFDQMIDSGIKPDHISMVTVLSACSHSGLVTEGEKLFDKMTSSYGIKPQMEHYSCMVDLY 546
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
A+ +L A + E S+ W +++ AC H
Sbjct: 547 ARSGLLEKAEGMLNESSSPPTSMMWAALVGAC------------------------HDRG 582
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM-- 462
N ++G A LEM T+ + L +++ G D L + RKL +
Sbjct: 583 NIIIGERAARRLLEMKTENAGHYV---LIANMYAAAGCWD------ELATVRKLMRDLGV 633
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA-------CSHV 515
++W L G+A F GD RS ++P + ++ L+ CS +
Sbjct: 634 TKAPGLAWVDLRNGFAPFLVGD---------RSNPLAPEIYEVLDELSEQMRNIGNCSDL 684
Query: 516 GLVEE 520
+VEE
Sbjct: 685 DIVEE 689
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 184/595 (30%), Positives = 307/595 (51%), Gaps = 57/595 (9%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKC---QPDVVLQNHILNMYGKCGSLED 88
R+ G++ C S+ LG+++H L +C + DV + +++MY K S+ D
Sbjct: 100 RVGGGALVGVLKVCGSVPDRVLGKQLHG--LCIRCGHDRGDVGVGTSLVDMYMKWHSVVD 157
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
R F+ MP+RNVV+WT+++ G Q+ +D ++L+ +M GV P TF S++ +
Sbjct: 158 GRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVAS 217
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
G V LGR++HA +K S + N+L+ MY K + +AR VF G+ +D+ SW ++
Sbjct: 218 QGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTL 277
Query: 209 IAAFSKLGYELEALCHFNE------------------------------MLHHGAYQPNE 238
+A G++LEAL F++ LH +
Sbjct: 278 MAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGF 337
Query: 239 FIFGSVFSACSNF---ARILFNEID-------SPDLASWNALIAGVASHSNANEAMSLFS 288
+G+V +A + A L N +D S ++ SW A+I G + + A +LFS
Sbjct: 338 HSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFS 397
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
MR+ + P+ T ++L A + L Q+H+ +IK ++ V A+L Y+K
Sbjct: 398 RMREDGVAPNDFTYSTILTASVASLP----PQIHAQVIKTNYECTSIVGTALLASYSK-- 451
Query: 349 VLCN---ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
LCN AL +FK + + D VSW++++ Q ++ +F +M +KP+ T +
Sbjct: 452 -LCNTEEALSIFKMIDQK-DVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTIS 509
Query: 406 DVMGACA-KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
V+ ACA A +++ Q H K + V + L+ +Y + GS+ SA+ +F +
Sbjct: 510 SVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTD 569
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
D+VSW+S++ GYAQ G +AL +F +M + G+ + VT + V+ C+H GLVEEG
Sbjct: 570 RDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRY 629
Query: 525 YRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ M +YGI PT EH +C+VDL +RAG + EA I M+ A +VW++LL +
Sbjct: 630 FDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGA 684
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 147/540 (27%), Positives = 243/540 (45%), Gaps = 66/540 (12%)
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
AR FD++P RN + + + L + G + G G ++K C
Sbjct: 57 ARQAFDEIPHRNTLDHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVG-VLKVCGS 115
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIA-QNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
+ LG+QLH I+ H + +L+ MY K+ ++D R VF + +++V +W S
Sbjct: 116 VPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTS 175
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV----------------------F 245
++ + + G + + F M G + PN F SV F
Sbjct: 176 LLTGYIQDGALSDVMELFFRMRAEGVW-PNSVTFASVLSVVASQGMVDLGRRVHAQSVKF 234
Query: 246 SACSNF------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
CS AR++F +++ D+ SWN L+AG+ + + EA+ LF
Sbjct: 235 GCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLF 294
Query: 288 SEMRDRELLPDGLTVHSL--LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
+ R + T ++ LCA I +L L + Q+HS ++K GF S V A++ Y+
Sbjct: 295 HDSRSSITMLTQSTYATVIKLCANIKQLGLAR--QLHSSVLKRGFHSYGNVMTALMDAYS 352
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
K L NAL +F + + + VSW ++I C+Q+ LFSRM + P+ T++
Sbjct: 353 KAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYS 412
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
++ A +ASL Q+H + KT V L+ Y K + A +F ++
Sbjct: 413 TIL--TASVASLP--PQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQK 468
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
DVVSWS+++ YAQ G D A +F +M G+ PN T+ V+ AC+ G+ L
Sbjct: 469 DVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACAS---PTAGVDLG 525
Query: 526 RIMENEYGIIPTREHC-------SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
R ++ I + C S +V + AR G + A+ I + D D+V W S+L+
Sbjct: 526 R----QFHAISIKHRCHDALCVSSALVSMYARKGSIESAQ-CIFERQTDRDLVSWNSMLS 580
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 206/453 (45%), Gaps = 53/453 (11%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
EAL + S+++ + + STYA +I C++++ L L R++H +L + +
Sbjct: 289 EALQLFHDSRSSITM-LTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTAL 347
Query: 77 LNMYGKCGSLEDARMGFDKMP-QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
++ Y K G L +A F M +NVVSWTAMI GC QN A L+ +M + GV P
Sbjct: 348 MDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPN 407
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
FT+ +I+ A L Q+HA VIK+ + I AL+A Y+K +A ++F
Sbjct: 408 DFTYSTILTA----SVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFK 463
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----- 250
I +KDV SW +M+ +++ G A F +M HG +PNEF SV AC++
Sbjct: 464 MIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHG-LKPNEFTISSVIDACASPTAGV 522
Query: 251 ------------------------------------FARILFNEIDSPDLASWNALIAGV 274
A+ +F DL SWN++++G
Sbjct: 523 DLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGY 582
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSN 333
A H + +A+ +F +M + DG+T S++ C + +G + + + G
Sbjct: 583 AQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPT 642
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
+ ++ +Y++ L A+ + + + A + W +++ AC H EL +L + L
Sbjct: 643 MEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNV-ELGKLAAEKL 701
Query: 394 ASQIKPDHITF---NDVMGACAKMASLEMVTQL 423
S D T+ +++ A K + V +L
Sbjct: 702 LSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKL 734
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 166/535 (31%), Positives = 266/535 (49%), Gaps = 65/535 (12%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
M+ K G L DAR F +MP+R+ VSWT M+ G ++ + +AIK + M G P QFT
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
+++ +C+ + +GR++H+ V+K GS + N+++ MY K A VF +
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE 258
+ V+SW +M++ + LG + A LF
Sbjct: 121 VRSVSSWNAMVSLNTHLGR-------------------------------MDLAESLFES 149
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGRLTLYQ 317
+ + SWNA+IAG + +A+ LFS M + + PD T+ S+L AC +
Sbjct: 150 MPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRI 209
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE------------------ 359
G QVH+YI++ N V NA+++ YAK + NA + +
Sbjct: 210 GKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGY 269
Query: 360 --------------LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
+ N D V+W ++I Q+ + +E LF M+ +P+ T
Sbjct: 270 VKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLA 329
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM-EN 464
V+ CA +A L+ Q+HC ++ L V N ++ +Y + GS AR++F+ +
Sbjct: 330 AVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWR 389
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
+ ++W+S+I+ AQ G G+EA+ LF M GV P+ +T VGVL+ACSH G V EG
Sbjct: 390 KETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRY 449
Query: 525 YRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
Y ++NE+ I P H +C+VDLLARAG EA++FI +M + D + W SLL++
Sbjct: 450 YDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSA 504
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 218/493 (44%), Gaps = 124/493 (25%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHIL---LSKCQPDVVLQNHILNMYGKCGSLEDA---- 89
T ++S+C+ ++ +GRKVH ++ L C P + N +LNMYGKCG E A
Sbjct: 60 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVP---VANSVLNMYGKCGDSETATTVF 116
Query: 90 ----------------------RMG-----FDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
RM F+ MP R++VSW AMIAG +QN + A+K
Sbjct: 117 ERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALK 176
Query: 123 LYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
L+ +ML +S + P +FT S++ AC+ LG+V +G+Q+HA+++++E + NALI+ Y
Sbjct: 177 LFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTY 236
Query: 182 TK------FDRILD---------------------------ARNVFSGIARKDVTSWGSM 208
K RI+D AR +F + +DV +W +M
Sbjct: 237 AKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAM 296
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------ 250
I + + G EA+ F M+ G +PN + +V S C++
Sbjct: 297 IVGYEQNGRNDEAIDLFRSMITCGP-EPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL 355
Query: 251 ----------------------FARILFNEI-DSPDLASWNALIAGVASHSNANEAMSLF 287
+AR +F+++ + +W ++I +A H EA+ LF
Sbjct: 356 LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLF 415
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII---KMGFDSNVPVCNAILTMY 344
EM + PD +T +L AC + +G + + I ++ + + C ++ +
Sbjct: 416 EEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYAC--MVDLL 473
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD---- 400
A+ + A + + D+++W S+++AC H A EL L + L S I P+
Sbjct: 474 ARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNA-ELAELAAEKLLS-IDPNNSGA 531
Query: 401 HITFNDVMGACAK 413
+ +V AC +
Sbjct: 532 YSAIANVYSACGR 544
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 190/414 (45%), Gaps = 66/414 (15%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK- 95
T ++SAC++L ++++G++VH +IL ++ + + N +++ Y K GS+E+AR D+
Sbjct: 193 TITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQS 252
Query: 96 --------------------------------MPQRNVVSWTAMIAGCSQNYQENDAIKL 123
M R+VV+WTAMI G QN + ++AI L
Sbjct: 253 METDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDL 312
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ M+ G P +T +++ C+ L + G+Q+H I+S NA+I MY +
Sbjct: 313 FRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYAR 372
Query: 184 FDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
AR +F + RK+ +W SMI A ++ G EA+ F EML G +P+ +
Sbjct: 373 SGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGV-EPDRITYV 431
Query: 243 SVFSACS-----NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
V SACS N + +++I +P+++ + ++ +A +EA M
Sbjct: 432 GVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRM-- 489
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK--MGFD-SNVPVCNAILTMYAKCSV 349
+ PD + SLL AC +++ ++ + + D +N +AI +Y+ C
Sbjct: 490 -PVEPDAIAWGSLLSAC----RVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGR 544
Query: 350 LCNALLVFKELGKNA----DSVSWNSIIAAC-------LQHNQAEELFRLFSRM 392
+A ++K + A SW I + + H Q + ++ + +RM
Sbjct: 545 WSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARM 598
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 187/577 (32%), Positives = 291/577 (50%), Gaps = 60/577 (10%)
Query: 51 LQLGRKVHDHILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ-RNVVSWTAMI 108
L+LGR +H +L D V+ N +L +Y +CG++ AR FD M R++VSWTAM
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 109 AGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH- 167
+ ++N E ++ L +ML+SG++P +T + AC CL + ++
Sbjct: 124 SCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 168 -GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
G+ + +ALI M + + AR VF G+ K V W +I+ + + EA+ F
Sbjct: 184 WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFL 243
Query: 227 EMLHHGAYQPNEFIFGSVFSACS------------------------------------- 249
+ L G ++P+ + S+ SAC+
Sbjct: 244 DFLEDG-FEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKS 302
Query: 250 ------NFARILFNEIDSPDLASWNALIAG-VASHSNANEAMSLFSEMRDRELLPDGLTV 302
++A +F + D+ SW ALI+G V S N+ M+LF EM + + P+ +T
Sbjct: 303 NIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITY 362
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
S+L +C G QVH+++IK S V NA+++MYA+ + A VF +L
Sbjct: 363 SSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQL-- 420
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
+ + C+ + F L R++ + TF ++ A A + L Q
Sbjct: 421 ------YERSMIPCITEGRD---FPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQ 471
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGC 482
LH K G D FV N L+ +Y +CG L A + FN +++ +V+SW+S+I G A+ G
Sbjct: 472 LHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGY 531
Query: 483 GDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCS 542
+ AL LF M GV PN VT + VL+ACSHVGLV EG +R M+ ++G+IP EH +
Sbjct: 532 AERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYA 591
Query: 543 CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
C+VDLLAR+G V EA +FIN+M AD +VWK+LL +
Sbjct: 592 CMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGA 628
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 191/385 (49%), Gaps = 42/385 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCG---SLEDARMGF 93
T + +ISAC+ L S++LG ++H L D + +++MY K +++ A F
Sbjct: 256 TMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVF 315
Query: 94 DKMPQRNVVSWTAMIAGCSQN-YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
++MP+ +V+SWTA+I+G Q+ QEN + L+ +ML + P T+ SI+K+C+ +
Sbjct: 316 ERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDH 375
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG---------------- 196
GRQ+HAHVIKS S NAL++MY + + +AR VF+
Sbjct: 376 DSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDF 435
Query: 197 -----IARKDV----TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
I R DV +++ S+I+A + +G L + M + + F+ S+ S
Sbjct: 436 PLDHRIVRMDVGISSSTFASLISAAASVGM-LTKGQQLHAMSLKAGFGSDRFVSNSLVSM 494
Query: 248 CSNFARIL-----FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
S + FNE+ ++ SW ++I+G+A H A A+SLF +M + P+ +T
Sbjct: 495 YSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTY 554
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSN-VPVCN---AILTMYAKCSVLCNALLVFK 358
++L AC + +G + Y M D +P ++ + A+ ++ AL
Sbjct: 555 IAVLSACSHVGLVREGKE---YFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFIN 611
Query: 359 ELGKNADSVSWNSIIAACLQHNQAE 383
E+ AD++ W +++ AC H+ E
Sbjct: 612 EMPLKADALVWKTLLGACRSHDNIE 636
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 156/319 (48%), Gaps = 36/319 (11%)
Query: 5 YVSSLCKQN----LYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDH 60
YV S ++N L+ E L N +I+ TY+ ++ +C+S+ GR+VH H
Sbjct: 333 YVQSGVQENKVMALFGEML--------NESIKPNHITYSSILKSCASISDHDSGRQVHAH 384
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
++ S + N +++MY + G +E+AR F+++ +R+++ E
Sbjct: 385 VIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCIT----------EGRD 434
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
L ++++ V TF S+I A + +G + G+QLHA +K+ GS N+L++M
Sbjct: 435 FPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSM 494
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y++ + DA F+ + ++V SW SMI+ +K GY AL F++M+ G +PN+
Sbjct: 495 YSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGV-KPNDVT 553
Query: 241 FGSVFSACSNFARI-----LFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEM 290
+ +V SACS+ + F + P + + ++ +A EA+ +EM
Sbjct: 554 YIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEM 613
Query: 291 RDRELLPDGLTVHSLLCAC 309
L D L +LL AC
Sbjct: 614 ---PLKADALVWKTLLGAC 629
>gi|293337115|ref|NP_001168043.1| uncharacterized protein LOC100381772 precursor [Zea mays]
gi|223945665|gb|ACN26916.1| unknown [Zea mays]
gi|224028321|gb|ACN33236.1| unknown [Zea mays]
Length = 780
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 186/581 (32%), Positives = 293/581 (50%), Gaps = 42/581 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY+G++SAC++ L +GR VH +L + DV + I+NMY KCG + A F +M
Sbjct: 140 TYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFVGTSIVNMYVKCGQMGAAMNEFWRM 199
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P RNVVSWT IAG Q +A+ L +ML+SGV ++T SI+ ACS +
Sbjct: 200 PIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGVAINKYTATSILLACSQTSMIREAN 259
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI-ARKDVTSWGSMIAAFSKL 215
Q+H +IKSE + + ALI+ Y + VF + + + W + I+ S+
Sbjct: 260 QVHGMIIKSELYLDHVVKEALISTYANAGAVQLCEKVFQEVDTVSNRSIWSAFISGVSRH 319
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--SNFARIL------------------ 255
+ ++ ML +PN+ + SVFS+ S R L
Sbjct: 320 SVQ-RSIQLLRRMLFQ-CLRPNDKCYASVFSSVDSSELGRQLHPLVIKDGFIHVVLVASA 377
Query: 256 -----------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
F E+ D SW ++IAG A+H ++ EA + M P+
Sbjct: 378 LSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPN 437
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+++ ++L AC L +G +VH ++++ + + + +++MY+KC L A +F
Sbjct: 438 DVSLSAILSACNIPECLLKGKEVHGHVLR-AYGRTTSINHCLVSMYSKCKDLQTARKLF- 495
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ D + +S+I+ + +EE LF MLA+ D + ++ CA MA
Sbjct: 496 DATPCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGFHIDRFLCSSIISICANMARPF 555
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
LH Y +K G+ D+ V + L+ +Y K G+L +RK+F+ ++ PD+V+W+++I GYA
Sbjct: 556 CGKLLHGYASKVGILSDLSVSSSLVKLYSKSGNLDDSRKVFDELDVPDLVTWTAIIDGYA 615
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
Q G +AL LF M GV P+ V LV VL+AC GLVEEG + M YG+ P
Sbjct: 616 QHGSSQDALALFDLMIRCGVKPDTVILVSVLSACGRNGLVEEGFKHFNSMRTVYGVEPVL 675
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
H C+VDLL R+G + EA+ FI M + +VW +LLA+
Sbjct: 676 HHYCCMVDLLGRSGRLVEAKSFIESMPVKPNSMVWSTLLAA 716
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 137/554 (24%), Positives = 259/554 (46%), Gaps = 56/554 (10%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQR-NVVSWTAMIAGCSQNYQENDAIKLYIQM 127
D + + ++++ K G L DA F+ R +VV W I+G +N + +++++ M
Sbjct: 69 DAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRNGEHALGVEMFLDM 128
Query: 128 LQ-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
++ S P FT+ ++ AC+ + +GR +H V++ + + +++ MY K +
Sbjct: 129 VRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFVGTSIVNMYVKCGQ 188
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+ A N F + ++V SW + IA F + + A+ EML G N++ S+
Sbjct: 189 MGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGV-AINKYTATSILL 247
Query: 247 ACSNFARI----------------------------------------LFNEIDS-PDLA 265
ACS + I +F E+D+ + +
Sbjct: 248 ACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQLCEKVFQEVDTVSNRS 307
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
W+A I+GV+ HS ++ L M + L P+ S+ + + G Q+H +
Sbjct: 308 IWSAFISGVSRHS-VQRSIQLLRRMLFQCLRPNDKCYASVFSSVD---SSELGRQLHPLV 363
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
IK GF V V +A+ TMY++C+ L ++ VF+E+ + D VSW S+IA H + E
Sbjct: 364 IKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEM-QEQDEVSWTSMIAGFATHGHSVEA 422
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
F++ M+A P+ ++ + ++ AC L ++H ++ + + + L+ +
Sbjct: 423 FQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLR-AYGRTTSINHCLVSM 481
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y KC L +ARKLF+ D + SS+I GYA G +EAL LF M + G +
Sbjct: 482 YSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGFHIDRFLC 541
Query: 506 VGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
+++ C+++ G LH Y ++ GI+ S +V L +++G + ++ ++
Sbjct: 542 SSIISICANMARPFCGKLLHGY---ASKVGILSDLSVSSSLVKLYSKSGNLDDSRKVFDE 598
Query: 564 MACDADIVVWKSLL 577
+ D+V W +++
Sbjct: 599 LDV-PDLVTWTAII 611
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 183/381 (48%), Gaps = 47/381 (12%)
Query: 43 SACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVV 102
S SS+ S +LGR++H ++ V++ + + MY +C L+D+ F++M +++ V
Sbjct: 345 SVFSSVDSSELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEV 404
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
SWT+MIAG + + +A ++ M+ G P + +I+ AC+ + G+++H HV
Sbjct: 405 SWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHV 464
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL 222
+++ +G + L++MY+K + AR +F KD SMI+ ++ GY EAL
Sbjct: 465 LRA-YGRTTSINHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEAL 523
Query: 223 CHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------------- 254
F ML G + + F+ S+ S C+N AR
Sbjct: 524 SLFQLMLAAG-FHIDRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKL 582
Query: 255 ------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
+F+E+D PDL +W A+I G A H ++ +A++LF M + PD + +
Sbjct: 583 YSKSGNLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVIL 642
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN---AILTMYAKCSVLCNALLVFKE 359
S+L AC GR L + H ++ + PV + ++ + + L A +
Sbjct: 643 VSVLSAC-GRNGLVEEGFKHFNSMRTVYGVE-PVLHHYCCMVDLLGRSGRLVEAKSFIES 700
Query: 360 LGKNADSVSWNSIIAACLQHN 380
+ +S+ W++++AAC H+
Sbjct: 701 MPVKPNSMVWSTLLAACRVHD 721
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 220/491 (44%), Gaps = 52/491 (10%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
+ + I T ++ ACS ++ +VH I+ S+ D V++ +++ Y G+++
Sbjct: 232 RSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQ 291
Query: 88 DARMGF---DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
F D + R++ W+A I+G S++ + +I+L +ML + P + S+
Sbjct: 292 LCEKVFQEVDTVSNRSI--WSAFISGVSRHSVQR-SIQLLRRMLFQCLRPNDKCYASVF- 347
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
S + S LGRQLH VIK ++ +AL MY++ + + D+ VF + +D S
Sbjct: 348 --SSVDSSELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVS 405
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------- 249
W SMIA F+ G+ +EA M+ G + PN+ ++ SAC+
Sbjct: 406 WTSMIAGFATHGHSVEAFQVLRNMIAEG-FTPNDVSLSAILSACNIPECLLKGKEVHGHV 464
Query: 250 ------------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
AR LF+ D +++I+G A++ + EA+S
Sbjct: 465 LRAYGRTTSINHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALS 524
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
LF M D S++ C + G +H Y K+G S++ V ++++ +Y+
Sbjct: 525 LFQLMLAAGFHIDRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYS 584
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
K L ++ VF EL D V+W +II QH +++ LF M+ +KPD +
Sbjct: 585 KSGNLDDSRKVFDEL-DVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILV 643
Query: 406 DVMGACAKMASLEM-VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME- 463
V+ AC + +E + T G+ + ++D+ + G L A+ M
Sbjct: 644 SVLSACGRNGLVEEGFKHFNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPV 703
Query: 464 NPDVVSWSSLI 474
P+ + WS+L+
Sbjct: 704 KPNSMVWSTLL 714
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 124/262 (47%), Gaps = 6/262 (2%)
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
Q++ K G + +C+ ++ + AK L +AL F++ V WN+ I+ +++
Sbjct: 56 QLYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRN 115
Query: 380 NQAEELFRLFSRML-ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+ +F M+ S +P+ T++ V+ ACA L + +H + + +DVFV
Sbjct: 116 GEHALGVEMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFV 175
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
++++Y+KCG +G+A F M +VVSW++ I G+ Q A+ L T M GV
Sbjct: 176 GTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGV 235
Query: 499 SPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
+ N T +L ACS ++ E +H I Y +E ++ A AG V
Sbjct: 236 AINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKE---ALISTYANAGAVQL 292
Query: 557 AEDFINQMACDADIVVWKSLLA 578
E ++ ++ +W + ++
Sbjct: 293 CEKVFQEVDTVSNRSIWSAFIS 314
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 135/317 (42%), Gaps = 15/317 (4%)
Query: 267 WNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
WN I+G + + +F +M R P+ T +L AC L G VH +
Sbjct: 105 WNTAISGAVRNGEHALGVEMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMV 164
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
++ + +V V +I+ MY KC + A+ F + + VSW + IA +Q
Sbjct: 165 LRRDSEYDVFVGTSIVNMYVKCGQMGAAMNEFWRMPIR-NVVSWTTAIAGFVQQEDPVNA 223
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
L + ML S + + T ++ AC++ + + Q+H I K+ L D V L+
Sbjct: 224 MLLLTEMLRSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALIST 283
Query: 446 YIKCGSLGSARKLFNFMENPDVVS----WSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
Y G++ K+F + D VS WS+ I G ++ +++L RM + PN
Sbjct: 284 YANAGAVQLCEKVF---QEVDTVSNRSIWSAFISGVSRHSV-QRSIQLLRRMLFQCLRPN 339
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
V S V E G L+ ++ + G I S + + +R + ++
Sbjct: 340 DKCYASVF---SSVDSSELGRQLHPLVIKD-GFIHVVLVASALSTMYSRCNDLKDSYKVF 395
Query: 562 NQMACDADIVVWKSLLA 578
+M + D V W S++A
Sbjct: 396 EEMQ-EQDEVSWTSMIA 411
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 167/572 (29%), Positives = 284/572 (49%), Gaps = 60/572 (10%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
Y+ + C+ + + LG ++H ++ DV L+ ++N YG+C LE A F +
Sbjct: 675 EVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHE 734
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP + W I Q+ + ++L+ +M S + T +++AC +G++
Sbjct: 735 MPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAA 794
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+Q+H +V + S + N LI+MY+K ++ AR VF + ++ +SW SMI++++ L
Sbjct: 795 KQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAAL 854
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDS----PDLASWNALI 271
G+ N A LF E++S PD+ +WN L+
Sbjct: 855 GF-------------------------------LNDAWSLFYELESSDMKPDIVTWNCLL 883
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
+G H E +++ M+ P+ ++ S+L A L G + H Y+++ GFD
Sbjct: 884 SGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFD 943
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
+V V +++ MY K L +A VF + KN + +WNS+++ E+ RL ++
Sbjct: 944 CDVYVGTSLIDMYVKNHSLXSAQAVFDNM-KNRNIFAWNSLVSGYSFKGMFEDALRLLNQ 1002
Query: 392 MLASQIKPDHITFNDVMG------------------------ACAKMASLEMVTQLHCYI 427
M IKPD +T+N ++ ACA ++ L+ ++HC
Sbjct: 1003 MEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLS 1062
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
+ G DVFV L+D+Y K SL +A K+F ++N + SW+ +I+G+A FG G EA+
Sbjct: 1063 IRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAI 1122
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
+F M+ +GV P+ +T +L+AC + GL+ EG + M +Y I+P EH C+VDL
Sbjct: 1123 SVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDL 1182
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
L RAG + EA D I+ M D +W +LL S
Sbjct: 1183 LGRAGYLDEAWDLIHTMPLKPDATIWGALLGS 1214
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 121/481 (25%), Positives = 205/481 (42%), Gaps = 76/481 (15%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++ +T ++ AC + +L +++H ++ DV L N +++MY K G LE AR
Sbjct: 771 LKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELAR 830
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP----------GQFTFG 140
FD M RN SW +MI+ + NDA L+ ++ S + P G F G
Sbjct: 831 RVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHG 890
Query: 141 -------------------------SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
S+++A S LG + +G++ H +V+++ +
Sbjct: 891 YKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGT 950
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
+LI MY K + A+ VF + +++ +W S+++ +S G +AL N+M G
Sbjct: 951 SLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGI-- 1008
Query: 236 PNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
PDL +WN +I+G A A +A
Sbjct: 1009 -------------------------KPDLVTWNGMISGYAMWGCARKA-----------F 1032
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
+P+ ++ LL AC L +G ++H I+ GF +V V A++ MY+K S L NA
Sbjct: 1033 MPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHK 1092
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF+ + +N SWN +I +E +F+ M + PD ITF ++ AC
Sbjct: 1093 VFRRI-QNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSG 1151
Query: 416 SL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSL 473
+ E IT + + ++D+ + G L A L + M PD W +L
Sbjct: 1152 LIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGAL 1211
Query: 474 I 474
+
Sbjct: 1212 L 1212
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 162/316 (51%), Gaps = 6/316 (1%)
Query: 266 SWNALIAGVASHSNA-NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
WN+ + S + + + + +F E+ + ++ D L C + ++ GM++H
Sbjct: 640 KWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGC 699
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
+IK GFD +V + A++ Y +C L A VF E+ N +++ WN I LQ + ++
Sbjct: 700 LIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEM-PNPEALLWNEAIILNLQSEKLQK 758
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
LF +M S +K + T V+ AC KM +L Q+H Y+ + GL DV + N L+
Sbjct: 759 GVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLIS 818
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y K G L AR++F+ MEN + SW+S+I YA G ++A LF + S + P++VT
Sbjct: 819 MYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVT 878
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH---EAEDFI 561
+L+ G EE L++ + M+ E G P + V+ ++ G ++ E ++
Sbjct: 879 WNCLLSGHFLHGYKEEVLNILQRMQGE-GFKPNSSSMTSVLQAISELGFLNMGKETHGYV 937
Query: 562 NQMACDADIVVWKSLL 577
+ D D+ V SL+
Sbjct: 938 LRNGFDCDVYVGTSLI 953
>gi|357153657|ref|XP_003576524.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic-like [Brachypodium distachyon]
Length = 809
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 191/584 (32%), Positives = 300/584 (51%), Gaps = 48/584 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY+G++SAC+ L +GR VH +L + DV + I+NMY K G + A F +M
Sbjct: 172 TYSGVLSACAMGAELCVGRAVHGLVLRRDPEYDVFVGTSIVNMYAKSGDMIAAMREFWRM 231
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P RNVVSWT IAG Q + A++L +M++SGV ++T SI+ ACS + +
Sbjct: 232 PIRNVVSWTTAIAGFVQEEEPVSAVRLLREMVRSGVSMNKYTATSILLACSQMYMIREVS 291
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS-WGSMIAAFSK- 214
Q+H ++K E + ALI Y I + F + T W + I+ S
Sbjct: 292 QMHGMIMKKELYLDHAVKEALICTYANIGAIELSETAFEEVGTVSSTRIWSTFISGVSSH 351
Query: 215 -LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN--FARIL---------------- 255
L L+ L M G +PN+ + SVFS+ + F R L
Sbjct: 352 SLPRSLQLLM---RMFRQG-LRPNDRCYASVFSSMDSIEFGRQLHSLVIKDGFVHDVLVG 407
Query: 256 -------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
F E+ D SW A++AG ASH ++ EA LF M
Sbjct: 408 SALSTMYSRGDDLEDSYRVFKEMQERDEVSWTAMVAGFASHGHSVEAFRLFRIMILDGFK 467
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALL 355
PD +T+ ++L AC L +G +H +I+++ G +++ C +++MY+KC A
Sbjct: 468 PDYVTLSAILSACDKPECLLKGKTIHGHILRVHGEITSISHC--LVSMYSKCQEAQTARR 525
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F + D V ++S+I+ + + E LF ML++ + D + ++ CA +A
Sbjct: 526 IF-DATPCKDQVMFSSMISGYSTNGCSAEAMSLFQLMLSTGFQIDRFICSSILSLCADIA 584
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
LH + K G+ D+ V + L+ +Y K G+L +RK+F+ + +PD+V+W+++I
Sbjct: 585 RPLYGKLLHGHAIKAGILSDLSVSSSLVKLYSKSGNLNDSRKVFDEITSPDLVTWTAIID 644
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
GYAQ G G +AL++F M +LGV P+ V LV VL+ACS GLVEEG++ + M YG+
Sbjct: 645 GYAQHGSGRDALEMFDLMITLGVKPDTVVLVSVLSACSRNGLVEEGVNYFESMRTIYGVE 704
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P H C+VDLL R+G + +A+ FI M AD++VW +L A+
Sbjct: 705 PMLHHYCCMVDLLGRSGRLQDAKSFIESMPMKADLMVWSTLFAA 748
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 140/552 (25%), Positives = 259/552 (46%), Gaps = 54/552 (9%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D + + ++++ K G EDA F+ + + V W +I+G +N Q+ AI ++ M+
Sbjct: 103 DAYVCSGMIDLLAKSGRFEDALKAFEDGDRGSAVCWNTVISGAVRNDQDRLAIDMFSDMV 162
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
+ P FT+ ++ AC+ +C+GR +H V++ + + +++ MY K ++
Sbjct: 163 RGSCEPNSFTYSGVLSACAMGAELCVGRAVHGLVLRRDPEYDVFVGTSIVNMYAKSGDMI 222
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
A F + ++V SW + IA F + + A+ EM+ G N++ S+ AC
Sbjct: 223 AAMREFWRMPIRNVVSWTTAIAGFVQEEEPVSAVRLLREMVRSGVSM-NKYTATSILLAC 281
Query: 249 S-----------------------------------NFARILFNEIDSPDLAS------W 267
S N I +E ++ + W
Sbjct: 282 SQMYMIREVSQMHGMIMKKELYLDHAVKEALICTYANIGAIELSETAFEEVGTVSSTRIW 341
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
+ I+GV+SHS ++ L M + L P+ S+ + ++ G Q+HS +IK
Sbjct: 342 STFISGVSSHS-LPRSLQLLMRMFRQGLRPNDRCYASVFSSMD---SIEFGRQLHSLVIK 397
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
GF +V V +A+ TMY++ L ++ VFKE+ + D VSW +++A H + E FR
Sbjct: 398 DGFVHDVLVGSALSTMYSRGDDLEDSYRVFKEM-QERDEVSWTAMVAGFASHGHSVEAFR 456
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
LF M+ KPD++T + ++ AC K L +H +I + + + L+ +Y
Sbjct: 457 LFRIMILDGFKPDYVTLSAILSACDKPECLLKGKTIHGHILRVHGEI-TSISHCLVSMYS 515
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
KC +AR++F+ D V +SS+I GY+ GC EA+ LF M S G +
Sbjct: 516 KCQEAQTARRIFDATPCKDQVMFSSMISGYSTNGCSAEAMSLFQLMLSTGFQIDRFICSS 575
Query: 508 VLTACSHVG--LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
+L+ C+ + L + LH + I + GI+ S +V L +++G ++++ +++
Sbjct: 576 ILSLCADIARPLYGKLLHGHAI---KAGILSDLSVSSSLVKLYSKSGNLNDSRKVFDEIT 632
Query: 566 CDADIVVWKSLL 577
D+V W +++
Sbjct: 633 -SPDLVTWTAII 643
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 176/381 (46%), Gaps = 43/381 (11%)
Query: 43 SACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVV 102
S SS+ S++ GR++H ++ DV++ + + MY + LED+ F +M +R+ V
Sbjct: 377 SVFSSMDSIEFGRQLHSLVIKDGFVHDVLVGSALSTMYSRGDDLEDSYRVFKEMQERDEV 436
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
SWTAM+AG + + +A +L+ M+ G P T +I+ AC + G+ +H H+
Sbjct: 437 SWTAMVAGFASHGHSVEAFRLFRIMILDGFKPDYVTLSAILSACDKPECLLKGKTIHGHI 496
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL 222
++ HG + L++MY+K AR +F KD + SMI+ +S G EA+
Sbjct: 497 LRV-HGEITSISHCLVSMYSKCQEAQTARRIFDATPCKDQVMFSSMISGYSTNGCSAEAM 555
Query: 223 CHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL--------------------------- 255
F ML G +Q + FI S+ S C++ AR L
Sbjct: 556 SLFQLMLSTG-FQIDRFICSSILSLCADIARPLYGKLLHGHAIKAGILSDLSVSSSLVKL 614
Query: 256 -------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
F+EI SPDL +W A+I G A H + +A+ +F M + PD + +
Sbjct: 615 YSKSGNLNDSRKVFDEITSPDLVTWTAIIDGYAQHGSGRDALEMFDLMITLGVKPDTVVL 674
Query: 303 HSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
S+L AC + +G+ S G + + ++ + + L +A + +
Sbjct: 675 VSVLSACSRNGLVEEGVNYFESMRTIYGVEPMLHHYCCMVDLLGRSGRLQDAKSFIESMP 734
Query: 362 KNADSVSWNSIIAACLQHNQA 382
AD + W+++ AAC HN A
Sbjct: 735 MKADLMVWSTLFAACRVHNDA 755
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 199/488 (40%), Gaps = 48/488 (9%)
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G P FG + AC G G V Q++ K + +I + K R DA
Sbjct: 64 GNTPSHLDFGKALAACVGPGHVAFAEQVYCVAWKDGLTGDAYVCSGMIDLLAKSGRFEDA 123
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
F R W ++I+ + + A+ F++M+ G+ +PN F + V SAC+
Sbjct: 124 LKAFEDGDRGSAVCWNTVISGAVRNDQDRLAIDMFSDMV-RGSCEPNSFTYSGVLSACAM 182
Query: 251 FARIL----------------------------------------FNEIDSPDLASWNAL 270
A + F + ++ SW
Sbjct: 183 GAELCVGRAVHGLVLRRDPEYDVFVGTSIVNMYAKSGDMIAAMREFWRMPIRNVVSWTTA 242
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
IAG A+ L EM + + T S+L AC + + Q+H I+K
Sbjct: 243 IAGFVQEEEPVSAVRLLREMVRSGVSMNKYTATSILLACSQMYMIREVSQMHGMIMKKEL 302
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+ V A++ YA + + F+E+G + + W++ I+ H+ L +L
Sbjct: 303 YLDHAVKEALICTYANIGAIELSETAFEEVGTVSSTRIWSTFISGVSSHSLPRSL-QLLM 361
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
RM ++P+ + V + M S+E QLH + K G DV V + L +Y +
Sbjct: 362 RMFRQGLRPNDRCYASVF---SSMDSIEFGRQLHSLVIKDGFVHDVLVGSALSTMYSRGD 418
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
L + ++F M+ D VSW++++ G+A G EA +LF M G P+ VTL +L+
Sbjct: 419 DLEDSYRVFKEMQERDEVSWTAMVAGFASHGHSVEAFRLFRIMILDGFKPDYVTLSAILS 478
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
AC + +G ++ + +G I + H C+V + ++ A + C D
Sbjct: 479 ACDKPECLLKGKTIHGHILRVHGEITSISH--CLVSMYSKCQEAQTARRIFDATPCK-DQ 535
Query: 571 VVWKSLLA 578
V++ S+++
Sbjct: 536 VMFSSMIS 543
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 97/187 (51%), Gaps = 4/187 (2%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
+T +I + ++S C+ + G+ +H H + + D+ + + ++ +Y K G+L
Sbjct: 563 STGFQIDRFICSSILSLCADIARPLYGKLLHGHAIKAGILSDLSVSSSLVKLYSKSGNLN 622
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
D+R FD++ ++V+WTA+I G +Q+ DA++++ M+ GV P S++ ACS
Sbjct: 623 DSRKVFDEITSPDLVTWTAIIDGYAQHGSGRDALEMFDLMITLGVKPDTVVLVSVLSACS 682
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILDARNVFSGIARK-DVTS 204
G V G + +++ +G + + ++ + + R+ DA++ + K D+
Sbjct: 683 RNGLVEEGVN-YFESMRTIYGVEPMLHHYCCMVDLLGRSGRLQDAKSFIESMPMKADLMV 741
Query: 205 WGSMIAA 211
W ++ AA
Sbjct: 742 WSTLFAA 748
>gi|302809659|ref|XP_002986522.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
gi|300145705|gb|EFJ12379.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
Length = 625
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 179/589 (30%), Positives = 294/589 (49%), Gaps = 50/589 (8%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP+ T++G+ S+CS L + I S +VV++N +++ Y + G L AR
Sbjct: 7 RPNGVTFSGVASSCSGREELD---TIQASIAASDFHSNVVVKNSLVSAYTRSGDLRSARK 63
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD + ++++SW +M+ SQ+ + ++L+ +M V P T+ SI+ ACS +
Sbjct: 64 VFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRKM---DVEPDSITYASILGACSAMEL 120
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ LG+++HA V +S S ALI MY+K + AR VF GI D + W +MI+
Sbjct: 121 LELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISG 180
Query: 212 FSKLGYELEALCHFNEM------------------------LHHG----------AYQPN 237
+ G EAL F M LH G +
Sbjct: 181 LVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCALEDLHEGIRIHEHASACGMDKD 240
Query: 238 EFIFGSVF---SACS--NFARILFNEI-DSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
+ +VF S C + AR +F+ + + ++ SWN++IA A EA+ L+ M+
Sbjct: 241 LVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREALELYELMK 300
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ + PD +T L AC +G ++HS I + ++V + AI+ MYAKC L
Sbjct: 301 EEGVQPDDITYAGALGACTSYGGSAKGAEIHSRITESKIRTDVFLDTAIVNMYAKCGELE 360
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A+ F+++ + ++V+W++++ A +Q E L+ RM++ +P IT + AC
Sbjct: 361 TAMSYFEKM-RRKNAVTWSAMVGAFIQQGYDREALDLYLRMVSEGFQPSEITLAGALAAC 419
Query: 412 AKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
+++ +L+ +H I T L +F+ N L+++Y KCG L A +F+ ++ D SW
Sbjct: 420 SRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSW 479
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
+++I+G+A G DE L L M GV P+ VT VL ACSH GL++ G + M
Sbjct: 480 NTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGRSHFLSMTG 539
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+Y I P +H C+VD+L+RAG EAE M V W +LL +
Sbjct: 540 DYCIKPMLDHYECLVDVLSRAGWAREAEALAMAMPFTPRPVTWTTLLGA 588
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 233/473 (49%), Gaps = 57/473 (12%)
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
ML G P TF + +CSG + + A + S+ S+++ +N+L++ YT+
Sbjct: 1 MLLEGFRPNGVTFSGVASSCSGREEL---DTIQASIAASDFHSNVVVKNSLVSAYTRSGD 57
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+ AR VF I KD+ SW SM+ A+S+ G+ E L F +M +P+ + S+
Sbjct: 58 LRSARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRKM----DVEPDSITYASILG 113
Query: 247 ACSNF----------------------------------------ARILFNEIDSPDLAS 266
ACS AR +F+ I S D +
Sbjct: 114 ACSAMELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSP 173
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WNA+I+G+ H A EA+ LF M+ + D ++ ++L AC L++G+++H +
Sbjct: 174 WNAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCALEDLHEGIRIHEHAS 233
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
G D ++ V A+ MY+KC + A +F + + + VSWNS+IAA Q + E
Sbjct: 234 ACGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREAL 293
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
L+ M ++PD IT+ +GAC ++H IT++ + DVF+ ++++Y
Sbjct: 294 ELYELMKEEGVQPDDITYAGALGACTSYGGSAKGAEIHSRITESKIRTDVFLDTAIVNMY 353
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KCG L +A F M + V+WS+++ + Q G EAL L+ RM S G P+ +TL
Sbjct: 354 AKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQQGYDREALDLYLRMVSEGFQPSEITLA 413
Query: 507 GVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHC----SCVVDLLARAGCV 554
G L ACS +G ++EG ++ RI E T ++C + ++++ A+ GC+
Sbjct: 414 GALAACSRIGALQEGKAIHSRIQATE-----TLQNCLFLQNSLLNMYAKCGCL 461
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 196/427 (45%), Gaps = 51/427 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S L + EAL ++ + + +RI +Y ++SAC +L L G ++H+H
Sbjct: 175 NAMISGLVQHGRAREALGLFERMKAES-VRIDKVSYLTILSACCALEDLHEGIRIHEHAS 233
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-NVVSWTAMIAGCSQNYQENDAI 121
D+V++ + NMY KC ++ AR FD M ++ NVVSW +MIA +Q+ + +A+
Sbjct: 234 ACGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREAL 293
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+LY M + GV P T+ + AC+ G G ++H+ + +S+ + + A++ MY
Sbjct: 294 ELYELMKEEGVQPDDITYAGALGACTSYGGSAKGAEIHSRITESKIRTDVFLDTAIVNMY 353
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K + A + F + RK+ +W +M+ AF + GY+ EAL + M+ G +QP+E
Sbjct: 354 AKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQQGYDREALDLYLRMVSEG-FQPSEITL 412
Query: 242 GSVFSACSN-----------------------------------------FARILFNEID 260
+ACS A +F+ +
Sbjct: 413 AGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQ 472
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D SWN +I G A H + +E +SL EM + PD +T +L AC L +G
Sbjct: 473 RRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRG-- 530
Query: 321 VHSYIIKMGFDSNV-PVCN---AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
S+ + M D + P+ + ++ + ++ A + + V+W +++ AC
Sbjct: 531 -RSHFLSMTGDYCIKPMLDHYECLVDVLSRAGWAREAEALAMAMPFTPRPVTWTTLLGAC 589
Query: 377 LQHNQAE 383
H + +
Sbjct: 590 KLHGETK 596
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 164/340 (48%), Gaps = 16/340 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +++ + EAL Y+ + ++ TYAG + AC+S G ++H I
Sbjct: 277 NSMIAAYAQSGRGREALELYELMKEE-GVQPDDITYAGALGACTSYGGSAKGAEIHSRIT 335
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
SK + DV L I+NMY KCG LE A F+KM ++N V+W+AM+ Q + +A+
Sbjct: 336 ESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQQGYDREALD 395
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH-LIAQNALIAMY 181
LY++M+ G P + T + ACS +G++ G+ +H+ + +E + L QN+L+ MY
Sbjct: 396 LYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMY 455
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K + A +FS + R+D SW ++I + G E L EM+ G P+ F
Sbjct: 456 AKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGV-DPDYVTF 514
Query: 242 GSVFSAC----------SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
V AC S+F + + P L + L+ ++ A EA +L M
Sbjct: 515 ACVLLACSHAGLLDRGRSHFLSMTGDYCIKPMLDHYECLVDVLSRAGWAREAEALAMAM- 573
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
P +T +LL AC +G++ ++++GF+
Sbjct: 574 --PFTPRPVTWTTLLGACKLHGETKRGVEAARSLLELGFE 611
>gi|297799986|ref|XP_002867877.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313713|gb|EFH44136.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 760
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 171/593 (28%), Positives = 305/593 (51%), Gaps = 18/593 (3%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N+ +S L ++ +AL Y + + R T A ++SACS ++ +G + H +
Sbjct: 93 NNMISVLVRKGFEEKALDVYGRMVGDGFLPSR-FTLASVLSACSKVQDGVIGMRCHGVAV 151
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMG-FDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ ++ + N +L+MY KCG + D + F+ + + N VS+T +I+G ++ + +A+
Sbjct: 152 KTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEPNEVSFTTVISGLARENKVLEAV 211
Query: 122 KLYIQMLQSGVMPGQFTFGSII------KACSGLGSV---CLGRQLHAHVIKSEHGSHLI 172
++ M + GV +I+ + C L + LG+Q+H+ ++ L
Sbjct: 212 HMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIYGNVLGKQIHSLALRRGFVGELH 271
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
N+L+ +Y K + A +F+ + +V SW MIA F + Y + + + +
Sbjct: 272 LNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGFGQ-EYRSDKSIEYLKRMRDS 330
Query: 233 AYQPNEFIFGSVFSAC-----SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
++PNE S+ AC R +FN I P +++WNA+++G +++ + EA++ F
Sbjct: 331 GFEPNEVTCISILGACFRSGDVETGRRIFNTIPQPSVSAWNAMLSGYSNYEHYEEAINNF 390
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
+M+ + L PD T+ +L +C L G Q+H I+ + + + ++ +Y++C
Sbjct: 391 RQMQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHGVAIRTETSEDSHIVSGLIAVYSEC 450
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM-LASQIKPDHITFND 406
+ +F + D WNS+I+ ++ + LF RM S + P+ T+
Sbjct: 451 EKMEICECIFDDCINELDIACWNSMISGLRRNTLDTKALMLFRRMHQTSVLLPNETTYAI 510
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
V+G+C+++ SL Q H + K+G D FV + D+Y KCG + SAR+ F+ + +
Sbjct: 511 VLGSCSRLCSLVHGRQFHGQVVKSGYVSDSFVETAVTDMYCKCGEIESARQFFDTVSRKN 570
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
V W+ +I GYA G GDEA+ L+ M S G P+ +T V VLTACSH GLV+ GL +
Sbjct: 571 TVIWNEMIHGYAHNGRGDEAVDLYREMISAGEKPDGITFVSVLTACSHSGLVDTGLEILS 630
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M+ ++GI P +H C+VD L RAG + +AE + V+W+ LL+S
Sbjct: 631 SMQRDHGIEPELDHYICIVDCLGRAGRLEDAETLAEATPYKSSSVLWEILLSS 683
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/575 (23%), Positives = 246/575 (42%), Gaps = 95/575 (16%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
RK+ D + L DV N L K G LE+A FD MP+R+VVSW MI+ +
Sbjct: 47 RKLFDEMSLR----DVYSWNAFLTFRCKVGDLEEACEVFDGMPERDVVSWNNMISVLVRK 102
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
E A+ +Y +M+ G +P +FT S++ ACS + +G + H +K+ ++
Sbjct: 103 GFEEKALDVYGRMVGDGFLPSRFTLASVLSACSKVQDGVIGMRCHGVAVKTGLDKNIFVG 162
Query: 175 NALIAMYTKFDRILD-ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA 233
NAL++MY K ++D VF ++ + S+ ++I+ ++ LEA+ F M G
Sbjct: 163 NALLSMYAKCGFMVDYGVRVFESLSEPNEVSFTTVISGLARENKVLEAVHMFRLMCEKGV 222
Query: 234 Y-------------QPNE------FIFGSVF----------------------------- 245
P E I+G+V
Sbjct: 223 QVDCVCLSNILSISVPREGCDSLSEIYGNVLGKQIHSLALRRGFVGELHLNNSLLEIYAK 282
Query: 246 SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
+ N A ++F E+ ++ SWN +IAG +++++ MRD P+ +T S+
Sbjct: 283 NKDMNGAELIFTEMPEVNVVSWNIMIAGFGQEYRSDKSIEYLKRMRDSGFEPNEVTCISI 342
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
L AC + G ++ + I + P +A
Sbjct: 343 LGACFRSGDVETGRRIFNTIPQ-------PSVSA-------------------------- 369
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
WN++++ + EE F +M +KPD T + ++ +CA++ LE Q+H
Sbjct: 370 ---WNAMLSGYSNYEHYEEAINNFRQMQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHG 426
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP-DVVSWSSLILGYAQFGCGD 484
+T + D +++GL+ +Y +C + +F+ N D+ W+S+I G +
Sbjct: 427 VAIRTETSEDSHIVSGLIAVYSECEKMEICECIFDDCINELDIACWNSMISGLRRNTLDT 486
Query: 485 EALKLFTRMRSLGV-SPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCS 542
+AL LF RM V PN T VL +CS + + G + +++++ Y E +
Sbjct: 487 KALMLFRRMHQTSVLLPNETTYAIVLGSCSRLCSLVHGRQFHGQVVKSGYVSDSFVE--T 544
Query: 543 CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
V D+ + G + A F + ++ + V+W ++
Sbjct: 545 AVTDMYCKCGEIESARQFFDTVS-RKNTVIWNEMI 578
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 167/361 (46%), Gaps = 42/361 (11%)
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
N L+ +Y +F AR +F ++ +DV SW + + K+G +LE C
Sbjct: 31 NRLLDLYIEFGDGDYARKLFDEMSLRDVYSWNAFLTFRCKVG-DLEEACE---------- 79
Query: 235 QPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+F+ + D+ SWN +I+ + +A+ ++ M
Sbjct: 80 --------------------VFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDG 119
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN-A 353
LP T+ S+L AC GM+ H +K G D N+ V NA+L+MYAKC + +
Sbjct: 120 FLPSRFTLASVLSACSKVQDGVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYG 179
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG---- 409
+ VF+ L + + VS+ ++I+ + N+ E +F M ++ D + ++++
Sbjct: 180 VRVFESLSE-PNEVSFTTVISGLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISVP 238
Query: 410 --ACAKMASLE---MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
C ++ + + Q+H + G ++ + N L++IY K + A +F M
Sbjct: 239 REGCDSLSEIYGNVLGKQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPE 298
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
+VVSW+ +I G+ Q D++++ RMR G PN VT + +L AC G VE G +
Sbjct: 299 VNVVSWNIMIAGFGQEYRSDKSIEYLKRMRDSGFEPNEVTCISILGACFRSGDVETGRRI 358
Query: 525 Y 525
+
Sbjct: 359 F 359
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 32/129 (24%)
Query: 419 MVTQLHCYI-TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-------------- 463
+ + L CY +TGL D ++ N L+D+YI+ G ARKLF+ M
Sbjct: 9 LASLLRCYRDERTGLNSDTYLCNRLLDLYIEFGDGDYARKLFDEMSLRDVYSWNAFLTFR 68
Query: 464 -----------------NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
DVVSW+++I + G ++AL ++ RM G P+ TL
Sbjct: 69 CKVGDLEEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFLPSRFTLA 128
Query: 507 GVLTACSHV 515
VL+ACS V
Sbjct: 129 SVLSACSKV 137
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 177/567 (31%), Positives = 284/567 (50%), Gaps = 44/567 (7%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-NVVSWTAMIAGCS 112
R H I S DVV+ N I++MY KCG A F ++ + +V+SW M+
Sbjct: 354 ARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASE 413
Query: 113 QNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI--KSEHGSH 170
+ + ML +G+ P + +F +I+ ACS ++ GR++H+ ++ + ++
Sbjct: 414 DRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVES 473
Query: 171 LIAQNALIAMYTKFDRILDARNVFS--GIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
+A L++MY K I +A VF + + + +W M+ A+++ EA EM
Sbjct: 474 SVA-TMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEM 532
Query: 229 LHHGAYQPNEFIFGSVFSAC---------------SNF---------------------A 252
L G P+ F SV S+C S + A
Sbjct: 533 LQ-GGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQA 591
Query: 253 RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
R +FNE+D D+ SW A+++ A + + E +LF M+ ++PD T+ + L C+
Sbjct: 592 RSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLAS 651
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
TL G +H+ + ++G ++++ V NA+L MY+ C AL F+ + K D VSWN +
Sbjct: 652 TTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETM-KARDLVSWNIM 710
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
AA Q A+E LF +M +KPD +TF+ + A + H ++GL
Sbjct: 711 SAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGL 770
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
DV V GL+ +Y KCG L A LF + VV +++I AQ G +EA+K+F +
Sbjct: 771 DSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWK 830
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAG 552
M+ GV P++ TLV +++AC H G+VEEG + M+ +GI PT EH +C VDLL RAG
Sbjct: 831 MQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAG 890
Query: 553 CVHEAEDFINQMACDADIVVWKSLLAS 579
+ AE I +M + + +VW SLL +
Sbjct: 891 QLEHAEQIIRKMPFEDNTLVWTSLLGT 917
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/596 (27%), Positives = 277/596 (46%), Gaps = 65/596 (10%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y L+ +C L G+ H+ I + + + L N ++NMY +CGSLE+A F KM
Sbjct: 28 YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+RNVVSWTA+I+ +Q A L+ M L+S P +T +++ AC+ + +GR
Sbjct: 88 ERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147
Query: 157 QLHAHV----IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
+HA + ++ + + NA+I MY K + DA VF I KDV SW +M A+
Sbjct: 148 SIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAY 207
Query: 213 SK-LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------ARILFNEI 259
++ + +AL F EML PN F + AC++ A + F+ +
Sbjct: 208 AQERRFYPDALRIFREMLLQ-PLAPNVITFITALGACTSLRDGTWLHSLLHEASLGFDPL 266
Query: 260 DSP----------------------------DLASWNALIAGVASHSNANEAMSLFSEMR 291
S DL SWNA+I+ +AM++F +R
Sbjct: 267 ASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLR 326
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ P+ +T+ ++L A + + H I + G+ +V + NAI++MYAKC
Sbjct: 327 LEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFF 386
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
A VF+ + D +SWN+++ A ++ F ML + I P+ ++F ++ A
Sbjct: 387 SAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNA 446
Query: 411 CAKMASLEMVTQLHCYI-TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP--DV 467
C+ +L+ ++H I T+ + V L+ +Y KCGS+ A +F M P +
Sbjct: 447 CSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSL 506
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR- 526
V+W+ ++ YAQ EA M GV P+ ++ VL++C + + R
Sbjct: 507 VTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC----YCSQEAQVLRM 562
Query: 527 -IMENEYGIIPTREHC--SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
I+E+ Y R C + ++ + R + +A N+M D+V W +++++
Sbjct: 563 CILESGY-----RSACLETALISMHGRCRELEQARSVFNEMD-HGDVVSWTAMVSA 612
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 166/602 (27%), Positives = 279/602 (46%), Gaps = 70/602 (11%)
Query: 35 PSTYA--GLISACSSLRSLQLGRKVHDHI----LLSKCQPDVVLQNHILNMYGKCGSLED 88
P++Y +++AC++ R L +GR +H I L ++ N ++NMY KCGSLED
Sbjct: 125 PNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLED 184
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQ-ENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
A F +P+++VVSWTAM +Q + DA++++ +ML + P TF + + AC+
Sbjct: 185 AIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACT 244
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK---DVTS 204
L G LH+ + ++ G +A NALI MY K A +VF +A + D+ S
Sbjct: 245 SLRD---GTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVS 301
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI--------------FG-------- 242
W +MI+A + G +A+ F + G +PN FG
Sbjct: 302 WNAMISASVEAGRHGDAMAIFRRLRLEG-MRPNSVTLITILNALAASGVDFGAARGFHGR 360
Query: 243 -----------------SVFSACSNF--ARILFNEIDSP-DLASWNALIAGVASHSNANE 282
S+++ C F A +F I D+ SWN ++ + +
Sbjct: 361 IWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGK 420
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD-SNVPVCNAIL 341
++ F M + P+ ++ ++L AC L G ++HS I+ D V ++
Sbjct: 421 VVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLV 480
Query: 342 TMYAKCSVLCNALLVFKELGKNADS-VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+MY KC + A LVFKE+ + S V+WN ++ A Q+++++E F ML + PD
Sbjct: 481 SMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPD 540
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
++F V+ +C S E C I ++G + L+ ++ +C L AR +FN
Sbjct: 541 ALSFTSVLSSC--YCSQEAQVLRMC-ILESGYR-SACLETALISMHGRCRELEQARSVFN 596
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
M++ DVVSW++++ A+ E LF RM+ GV P+ TL L C L
Sbjct: 597 EMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTC----LAST 652
Query: 521 GLHLYRIME---NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
L L +++ E G+ + ++++ + G EA F M D+V W +
Sbjct: 653 TLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKAR-DLVSWNIMS 711
Query: 578 AS 579
A+
Sbjct: 712 AA 713
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/515 (26%), Positives = 236/515 (45%), Gaps = 63/515 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQ-PDVVLQNHILNMYGKCGSLEDARMGFDK 95
++ +++ACS+ +L GRK+H IL + + + +++MYGKCGS+ +A + F +
Sbjct: 439 SFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKE 498
Query: 96 M--PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
M P R++V+W M+ +QN + +A ++MLQ GV+P +F S++ +C
Sbjct: 499 MPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQE-- 556
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
+ L +++S + S + + ALI+M+ + + AR+VF+ + DV SW +M++A +
Sbjct: 557 -AQVLRMCILESGYRSACL-ETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATA 614
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGS------------------------------ 243
+ E F M G P++F +
Sbjct: 615 ENRDFKEVHNLFRRMQLEGVI-PDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADI 673
Query: 244 --------VFSACSNFARIL--FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
++S C ++ L F + + DL SWN + A A A EA+ LF +M+
Sbjct: 674 AVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLE 733
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ PD LT + L G + G H+ + G DS+V V ++ +YAKC L A
Sbjct: 734 GVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEA 793
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
+ +F+ + V N+II A QH +EE ++F +M ++PD T ++ AC
Sbjct: 794 MSLFRG-ACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGH 852
Query: 414 MASLE------MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD- 466
+E + + + I+ T + FV D+ + G L A ++ M D
Sbjct: 853 AGMVEEGCSSFLTMKEYFGISPTLEHYACFV-----DLLGRAGQLEHAEQIIRKMPFEDN 907
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
+ W+SL LG + GD L R L + P+
Sbjct: 908 TLVWTSL-LGTCKLQ-GDAELGERCAQRILELDPH 940
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 179/582 (30%), Positives = 286/582 (49%), Gaps = 55/582 (9%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+S C+++ SL R+ H + + D+ + ++++YG G +DAR+ FD++P+ +
Sbjct: 62 LLSKCTNIDSL---RQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPD 118
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
W ++ N + + IK Y +++ G F +KAC+ + + G+++H
Sbjct: 119 FYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHC 178
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
++K +++ L+ MY K I + VF I ++V W SMIA + K E
Sbjct: 179 QIVKVPSFDNVVL-TGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEE 237
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------------- 251
L FN M + NE+ +G++ AC+
Sbjct: 238 GLVLFNRM-RENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLL 296
Query: 252 -----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
AR +FNE DL W A+I G + + NEA+SLF +M + P+ +
Sbjct: 297 DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCV 356
Query: 301 TVHSLLCAC--IGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVF 357
T+ S+L C +G L L G +H IK+G +D+NV NA++ MYAKC +A VF
Sbjct: 357 TIASVLSGCGLVGNLEL--GRSIHGLSIKVGIWDTNVA--NALVHMYAKCYQNRDAKYVF 412
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
E+ D V+WNSII+ Q+ E LF RM + P+ +T + ACA + SL
Sbjct: 413 -EMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSL 471
Query: 418 EMVTQLHCYITKTGL--AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+ + LH Y K G + V V L+D Y KCG SAR +F+ +E + ++WS++I
Sbjct: 472 AIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIG 531
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
GY + G +L+LF M PN T VL+ACSH G+V EG + M +Y
Sbjct: 532 GYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFT 591
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
P+ +H +C+VD+LARAG + +A D I +M D+ + + L
Sbjct: 592 PSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFL 633
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 138/502 (27%), Positives = 244/502 (48%), Gaps = 59/502 (11%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
++ + AC+ ++ L G+K+H I+ +VVL +L+MY KCG ++ + F+ +
Sbjct: 157 FSKALKACTEVQDLDNGKKIHCQIVKVPSFDNVVLTG-LLDMYAKCGEIKSSYKVFEDIT 215
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
RNVV WT+MIAG +N + + L+ +M ++ V+ ++T+G+++ AC+ L ++ G+
Sbjct: 216 LRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKW 275
Query: 158 LHAHVIKS--EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
H +IKS E S L+ +L+ MY K I +AR VF+ + D+ W +MI ++
Sbjct: 276 FHGCLIKSGIELSSCLVT--SLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHN 333
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--------------------------- 248
G EAL F +M G +PN SV S C
Sbjct: 334 GSVNEALSLFQKMSGVGI-KPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTNVA 392
Query: 249 ------------SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+ A+ +F D+ +WN++I+G + + + +EA+ LF M ++
Sbjct: 393 NALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVM 452
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF--DSNVPVCNAILTMYAKCSVLCNAL 354
P+G+TV SL AC +L G +H+Y +K+GF S+V V A+L YAKC +A
Sbjct: 453 PNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESAR 512
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
L+F + + ++++W+++I + + LF ML Q KP+ TF V+ AC+
Sbjct: 513 LIFDTI-EEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHT 571
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNG----LMDIYIKCGSLGSARKLFNFME-NPDVVS 469
MV + Y + ++ ++D+ + G L A + M PDV
Sbjct: 572 G---MVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRC 628
Query: 470 WSSLILG---YAQFGCGDEALK 488
+ + + G +++F G+ +K
Sbjct: 629 FGAFLHGCGMHSRFDLGEIVIK 650
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 206/442 (46%), Gaps = 48/442 (10%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
++ K +LY E LV ++ + N+ + TY L+ AC+ LR+L G+ H ++ S
Sbjct: 226 IAGYVKNDLYEEGLVLFNRMRENS-VLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSG 284
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ L +L+MY KCG + +AR F++ ++V WTAMI G + N N+A+ L+
Sbjct: 285 IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ 344
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M G+ P T S++ C +G++ LGR +H IK +A NAL+ MY K
Sbjct: 345 KMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTNVA-NALVHMYAKCY 403
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ DA+ VF + KD+ +W S+I+ FS+ G EAL F+ M + + PN S+F
Sbjct: 404 QNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM-NTESVMPNGVTVASLF 462
Query: 246 SACSNF------------------------------------------ARILFNEIDSPD 263
SAC++ AR++F+ I+ +
Sbjct: 463 SACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKN 522
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+W+A+I G + ++ LF EM ++ P+ T S+L AC + +G + S
Sbjct: 523 TITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFS 582
Query: 324 YIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ K F + ++ M A+ L AL + +++ D + + + C H++
Sbjct: 583 SMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRF 642
Query: 383 EELFRLFSRMLASQIKPDHITF 404
+ + +ML + PD ++
Sbjct: 643 DLGEIVIKKML--DLHPDDASY 662
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 175/327 (53%), Gaps = 5/327 (1%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR++F++I PD W ++ ++ + E + + + D + L AC
Sbjct: 107 ARLVFDQIPEPDFYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTE 166
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
L G ++H I+K+ NV V +L MYAKC + ++ VF+++ + V W S
Sbjct: 167 VQDLDNGKKIHCQIVKVPSFDNV-VLTGLLDMYAKCGEIKSSYKVFEDITLR-NVVCWTS 224
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+IA ++++ EE LF+RM + + + T+ ++ AC K+ +L H + K+G
Sbjct: 225 MIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSG 284
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
+ ++ L+D+Y+KCG + +AR++FN + D+V W+++I+GY G +EAL LF
Sbjct: 285 IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ 344
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
+M +G+ PN VT+ VL+ C VG +E G ++ + + GI T + +V + A+
Sbjct: 345 KMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHG-LSIKVGIWDTNV-ANALVHMYAKC 402
Query: 552 GCVHEAEDFINQMACDADIVVWKSLLA 578
+A+ ++ +M + DIV W S+++
Sbjct: 403 YQNRDAK-YVFEMESEKDIVAWNSIIS 428
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 154/494 (31%), Positives = 273/494 (55%), Gaps = 32/494 (6%)
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
++ AR FD++P + + I S+ N+A++ ++ M Q+ V FT I K+
Sbjct: 46 IQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKS 105
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
C+ L ++ +G+Q+H+ VI+ S + QNALI Y K + + A +F GI KD ++
Sbjct: 106 CASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAY 165
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLA 265
+I+A+S+ G L A R LF+++ +
Sbjct: 166 NCLISAYSRSGEVLAA-------------------------------RELFDKMRDRSIV 194
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SWNA+I+ A + + ++ +F M+D P+ +T+ ++L C L G+++
Sbjct: 195 SWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLN 254
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
SN+ V A+L MY KC + + LVF + + D V+W+++IA Q+ ++ E
Sbjct: 255 DNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARR-DVVTWSAMIAGYAQNGRSNEA 313
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
LF M ++QIKP+ +T V+ ACA++ S+E ++ Y+ GL +V+V + L+ +
Sbjct: 314 LELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGM 373
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y KCG++ AR++F+ + D V+W+S+I+G A G ++A+ L+ RM+ + V PN +T
Sbjct: 374 YSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITF 433
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
VG++TAC+H G VE GL +R M +++ I P EH +C+VDL R+G + +A +FI +M
Sbjct: 434 VGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRME 493
Query: 566 CDADIVVWKSLLAS 579
+ ++V+W +LL++
Sbjct: 494 VEPNVVIWGTLLSA 507
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 206/469 (43%), Gaps = 76/469 (16%)
Query: 5 YVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLS 64
++++ + +L NEAL + S + N+RI T + +C+SL ++ +G++VH ++
Sbjct: 67 FITAYSRLSLNNEALRTF-VSMHQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRY 125
Query: 65 KCQPDVVLQNHILNMYGK-------------------------------CGSLEDARMGF 93
V QN ++N Y K G + AR F
Sbjct: 126 GFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELF 185
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
DKM R++VSW AMI+ +QN + ++ +M P + T +++ C+ LG +
Sbjct: 186 DKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLE 245
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
+G ++ GS++I A++ MY K + D R VF +AR+DV +W +MIA ++
Sbjct: 246 MGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYA 305
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------- 251
+ G EAL F M +PN+ SV SAC+
Sbjct: 306 QNGRSNEALELFENM-KSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNV 364
Query: 252 ------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
AR +F+++ D +WN++I G+A + A +A++L++ M++
Sbjct: 365 YVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEI 424
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
E+ P+ +T L+ AC + G++ S N+ I+ ++ + L +
Sbjct: 425 EVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLID 484
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
A + + V W ++++A H EL L + L +++PD+
Sbjct: 485 AYEFICRMEVEPNVVIWGTLLSASRIHLNV-ELAELAGKKLL-ELEPDN 531
>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
Length = 806
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 178/584 (30%), Positives = 293/584 (50%), Gaps = 51/584 (8%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
I AC ++ L GR +H + + + +Q+ ++ MY +CG ++ A FD +
Sbjct: 158 IVACGRIKDLAQGRSIHYRVATGRG-INSSIQSALVTMYAQCGRIDLAMAAFDDNRELGT 216
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
W A+++ + AI+L+ QM Q + + AC+ G + G Q+H
Sbjct: 217 APWNAIMSALAGAGHHRRAIELFFQMEQHQC--SDRSCAIALGACAAAGHLRGGIQIHDK 274
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
+ HG+ ++ NALI+MY + ++ +A VF+ + ++V SW SMIAA ++ G+ +
Sbjct: 275 IQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFS 334
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------------ 251
+ F+ M+ G PNE + SV SA ++
Sbjct: 335 VKLFDGMIAEG-INPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNS 393
Query: 252 -------------ARILFNEI--DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR +F+ I +S + S+ +I+ A + + +A+ +F EM R +
Sbjct: 394 LINMYARSGLLAEAREVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVA 453
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC-NAILTMYAKCSVLCNALL 355
P+ +T ++L AC+ L G +H +I+ G DS+ P N+++ MYAKC L A
Sbjct: 454 PNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAAR 513
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF+ + K D V+W +IIAA +Q L+ RML S I PD T + ++ ACA +
Sbjct: 514 VFETM-KTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLG 572
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
L M ++H ++ L D N L +Y KCGSL A +L+ DV +W+S++
Sbjct: 573 DLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLA 632
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
++Q G AL+L+ M S GV PN VT + VL +CS GLV EG + + ++YG
Sbjct: 633 AHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQ 692
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P+ EH C+VD+L RAG + +AE+ ++ M D + W+SLL+S
Sbjct: 693 PSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSS 736
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 153/585 (26%), Positives = 271/585 (46%), Gaps = 47/585 (8%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
YA L+ C + R+L GR+VH HI+ + + +L + MY +C + A FD MP
Sbjct: 53 YANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMP 112
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
R W ++ + D ++LY +M P F I AC + + GR
Sbjct: 113 DRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRS 172
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H + + + G + Q+AL+ MY + RI A F W ++++A + G+
Sbjct: 173 IH-YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGH 231
Query: 218 ELEALCHFNEMLHH---------------------GAYQPNEFIFG-------------- 242
A+ F +M H G Q ++ I
Sbjct: 232 HRRAIELFFQMEQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALI 291
Query: 243 SVFSACSNFARIL--FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
S++ C L F ++ ++ SW ++IA VA + + ++ LF M + P+
Sbjct: 292 SMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGINPNEK 351
Query: 301 TVHSLLCAC--IGR-LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
T S++ A +GR L +G ++HS I G D++ V N+++ MYA+ +L A VF
Sbjct: 352 TYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVF 411
Query: 358 KELGKNADS-VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
+ +N+ + VS+ ++I+A + + +F M A + P+ ITF V+ AC +
Sbjct: 412 DSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGD 471
Query: 417 LEMVTQLHCYITKTGL-AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
L +H + ++GL + D F N L+D+Y KCG LG A ++F M+ D+V+W+++I
Sbjct: 472 LASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIA 531
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
Q G AL L+ RM G+ P++ TL +L AC+++G + G ++R + +
Sbjct: 532 ANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHR--QALRSKL 589
Query: 536 PTREHC-SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
H + + + A+ G + +A + +D+ W S+LA+
Sbjct: 590 EQDAHFQNALAAMYAKCGSLEKATRLYRRCR-GSDVATWTSMLAA 633
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 179/394 (45%), Gaps = 48/394 (12%)
Query: 37 TYAGLISACSSLRS---LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
TYA ++SA + L L GRK+H I S D ++QN ++NMY + G L +AR F
Sbjct: 352 TYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVF 411
Query: 94 DKMPQ--RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
D + + + VVS+T MI+ + N A++++ +M GV P + TF +++ AC +G
Sbjct: 412 DSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGD 471
Query: 152 VCLGRQLHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ G +H +I+S S A N+L+ MY K + A VF + KD+ +W ++IA
Sbjct: 472 LASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIA 531
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------- 251
A + G AL ++ ML G + P+ ++ AC+N
Sbjct: 532 ANVQSGNNRAALDLYDRMLQSGIH-PDIATLSTLLVACANLGDLAMGEKIHRQALRSKLE 590
Query: 252 ---------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
A L+ D+A+W +++A + A+ A+ L++EM
Sbjct: 591 QDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEM 650
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYAKCSV 349
+ P+ +T +L +C + +G + HS G + ++ + +
Sbjct: 651 ESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRAGK 710
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L +A + + D ++W S++++C H AE
Sbjct: 711 LRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAE 744
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 98/179 (54%), Gaps = 4/179 (2%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T + L+ AC++L L +G K+H L SK + D QN + MY KCGSLE A + +
Sbjct: 559 ATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRR 618
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+V +WT+M+A SQ + A++LY +M GV P + TF ++ +CS G V G
Sbjct: 619 CRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEG 678
Query: 156 RQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAA 211
R+ H I S++GS A++ ++ + + ++ DA + + D +W S++++
Sbjct: 679 REFF-HSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSS 736
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/127 (18%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
+ + +++ C +L+ ++H +I LA + + + +Y +C +A LF+
Sbjct: 51 LLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDA 110
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
M + W+ L+ + + L+L+ RM P+ + + AC + + +G
Sbjct: 111 MPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQG 170
Query: 522 LHL-YRI 527
+ YR+
Sbjct: 171 RSIHYRV 177
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 180/572 (31%), Positives = 288/572 (50%), Gaps = 54/572 (9%)
Query: 60 HILLSKCQP-------DVVLQNHILNMYGKC--GSLEDARMGFDKMPQRNVVSWTAMIAG 110
++ L+ CQ + + N+IL Y KC G L A FD+MP ++ V+W MI G
Sbjct: 17 NVFLTHCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITG 76
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
++ A + M + G +TFGSI+K + LG+Q+H+ ++K +
Sbjct: 77 YVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQS 136
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG-------------- 216
+ A +AL+ MY K +R+ DA +VF G+ ++ SW ++I F ++G
Sbjct: 137 VYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQK 196
Query: 217 ----------------------YELEALCHFNEMLHHGAYQPNEFIFGSV--FSAC---S 249
Y+L H +++ HG N ++ +S C
Sbjct: 197 EGVRVEDGTFAPLLTLLDGDKFYKLTMQLH-CKIIKHGLEFYNALCNATLTAYSECGLLE 255
Query: 250 NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+ R+ + + DL +WN+++ H +A +LF EM+ PD T ++ AC
Sbjct: 256 DAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISAC 315
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS--VLCNALLVFKELGKNADSV 367
G H+ +IK G + +V +CNA++TMY K + + AL +F + K+ D V
Sbjct: 316 FAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSM-KSKDRV 374
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
SWNSI+ Q +E+ +LF M +S + D ++ V+ +C+ +A L++ Q+H
Sbjct: 375 SWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLT 434
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
KTG + FV + L+ +Y KCG + A K F ++W+S++ YAQ G GD AL
Sbjct: 435 VKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVAL 494
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
LF+ MR V + VT V VLTACSHVGLVE+G + + ME++YGI P EH +C VDL
Sbjct: 495 DLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDL 554
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
RAG + EA+ I+ M + +V K+LL +
Sbjct: 555 FGRAGYLEEAKALIDSMPFQPNAMVLKTLLGA 586
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 145/516 (28%), Positives = 232/516 (44%), Gaps = 63/516 (12%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S G+ AC LG++VH I+ + V + +L+MY KC +EDA F
Sbjct: 107 SILKGVAHACRH----DLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQG 162
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP RN VSW A+I G Q + A L M + GV TF ++ G L
Sbjct: 163 MPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLT 222
Query: 156 RQLHAHVIKSEHGSHLIAQ--NALIAMYTKFDRILDARNVFSG-IARKDVTSWGSMIAAF 212
QLH +IK HG NA + Y++ + DA+ VF G + +D+ +W SM+ A+
Sbjct: 223 MQLHCKIIK--HGLEFYNALCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAY 280
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-----SNFARI------------- 254
+ +A F EM G ++P+ + + V SAC N+ +
Sbjct: 281 LVHDKDEDAFNLFLEMQGFG-FEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEES 339
Query: 255 ------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
LF+ + S D SWN+++ G + + +A+ LF M
Sbjct: 340 VTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHM 399
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
R D ++L +C L G Q+H +K GFDSN V ++++ MY+KC ++
Sbjct: 400 RSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGII 459
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
+A F++ K + S++WNSI+ A QH Q + LFS M ++K DH+TF V+ A
Sbjct: 460 EDAWKCFEDTTKES-SITWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTA 518
Query: 411 CAKMASLEMVTQLHCYI----TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NP 465
C+ + +V Q C + + G+ + +D++ + G L A+ L + M P
Sbjct: 519 CSHVG---LVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAGYLEEAKALIDSMPFQP 575
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
+ + +L LG + CG+ L + L V P
Sbjct: 576 NAMVLKTL-LGACR-ACGNIELAAQVASQLLEVEPE 609
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 146/322 (45%), Gaps = 44/322 (13%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+R+ T+A L++ + +L ++H I+ + L N L Y +CG LEDA+
Sbjct: 199 VRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAK 258
Query: 91 MGFD-KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
FD + R++V+W +M+ + ++ DA L+++M G P +T+ +I AC
Sbjct: 259 RVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAA 318
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR--ILDARNVFSGIARKDVTSWGS 207
G+ HA VIK + NALI MY K + + A N+F + KD SW S
Sbjct: 319 AHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNS 378
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE--------- 258
++ FS++G+ +AL F M + +++ + +V +CS+ A + +
Sbjct: 379 ILTGFSQMGFSEDALKLFGHM-RSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKT 437
Query: 259 -IDSPDLA------------------------------SWNALIAGVASHSNANEAMSLF 287
DS D +WN+++ A H + A+ LF
Sbjct: 438 GFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLF 497
Query: 288 SEMRDRELLPDGLTVHSLLCAC 309
S MR+RE+ D +T ++L AC
Sbjct: 498 SIMREREVKLDHVTFVAVLTAC 519
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 119/281 (42%), Gaps = 26/281 (9%)
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC--SVLCNALLVFKELGKNADSVSW 369
R LY H K G S++ V N IL Y+KC L A +F E+ + D+V+W
Sbjct: 12 RHALYNVFLTHCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEM-PHKDTVTW 70
Query: 370 NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
N++I ++ + M + D TF ++ A ++ Q+H I K
Sbjct: 71 NTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVK 130
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
G V+ + L+D+Y KC + A +F M + VSW++LI G+ Q G D A L
Sbjct: 131 IGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWL 190
Query: 490 FTRMRSLGV-------SPNLVTLVG----VLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
M+ GV +P L L G LT H +++ GL Y +
Sbjct: 191 LDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNAL---------- 240
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
C+ + + G + +A+ + D+V W S+L +
Sbjct: 241 --CNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVA 279
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 180/568 (31%), Positives = 289/568 (50%), Gaps = 56/568 (9%)
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
KV+D + + V N +++ Y K G L AR FD MP R VV+WT ++ + N
Sbjct: 65 KVYDEM----PHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNN 120
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ- 174
++A KL+ QM +S +P TF +++ C+ Q+HA +K ++L
Sbjct: 121 HFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTV 180
Query: 175 -NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA 233
N L+ Y + R+ A +F I KD ++ ++I + K G EA+ F +M G
Sbjct: 181 CNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSG- 239
Query: 234 YQPNEFIFGSVFSAC---SNFA-------------------------------------R 253
++P++F F V A +FA R
Sbjct: 240 HKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETR 299
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR----DRELLPDGLTVHSLLCAC 309
LFNE+ D S+N +I+ + E+++LF EM+ DR P ++L
Sbjct: 300 NLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFP----FATMLSIA 355
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSW 369
+L G QVH I DS + V N+++ MYAKC + A L+FK L + + +VSW
Sbjct: 356 ANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRS-TVSW 414
Query: 370 NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
++I+ +Q +LF++M + ++ D TF V+ A A ASL + QLH +I +
Sbjct: 415 TALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIR 474
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
+G +VF +GL+D+Y KCGS+ A ++F M + + VSW++LI YA G G+ A+
Sbjct: 475 SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGA 534
Query: 490 FTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLA 549
FT+M G+ P+ V+++GVL ACSH G VE+G ++ M YGI P ++H +C++DLL
Sbjct: 535 FTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLG 594
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLL 577
R G EAE +++M + D ++W S+L
Sbjct: 595 RNGRFAEAEKLMDEMPFEPDEIMWSSVL 622
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 186/435 (42%), Gaps = 52/435 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ K LY EA+ + + + T++G++ A L LG+++H +
Sbjct: 213 NTLITGYEKDGLYTEAIHLF-LKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSV 271
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D + N IL+ Y K + + R F++MP+ + VS+ +I+ SQ Q +++
Sbjct: 272 TTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLN 331
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ +M G F F +++ + L S+ +GRQ+H I + S L N+L+ MY
Sbjct: 332 LFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYA 391
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA-YQPNEFIF 241
K + +A +F ++++ SW ++I+ + + G L F +M GA + ++ F
Sbjct: 392 KCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKM--RGANLRADQSTF 449
Query: 242 GSVFSACSNFARIL----------------------------------------FNEIDS 261
+V A + FA +L F E+
Sbjct: 450 ATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPD 509
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
+ SWNALI+ A + + A+ F++M L PD +++ +L AC + QG +
Sbjct: 510 RNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEF 569
Query: 322 HSYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC---- 376
+ + G +L + + A + E+ D + W+S++ AC
Sbjct: 570 FQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYK 629
Query: 377 ---LQHNQAEELFRL 388
L AE+LF +
Sbjct: 630 NQSLAERAAEQLFSM 644
>gi|414885414|tpg|DAA61428.1| TPA: hypothetical protein ZEAMMB73_429908 [Zea mays]
Length = 817
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 186/581 (32%), Positives = 293/581 (50%), Gaps = 42/581 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY+G++SAC++ L +GR VH +L + DV + I+NMY KCG + A F +M
Sbjct: 177 TYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFVGTSIVNMYVKCGQMGAAMNEFWRM 236
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P RNVVSWT IAG Q +A+ L +ML+SGV ++T SI+ ACS +
Sbjct: 237 PIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGVAINKYTATSILLACSQTSMIREAN 296
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI-ARKDVTSWGSMIAAFSKL 215
Q+H +IKSE + + ALI+ Y + VF + + + W + I+ S+
Sbjct: 297 QVHGMIIKSELYLDHVVKEALISTYANAGAVQLCEKVFQEVDTVSNRSIWSAFISGVSRH 356
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--SNFARIL------------------ 255
+ ++ ML +PN+ + SVFS+ S R L
Sbjct: 357 SVQ-RSIQLLRRMLFQ-CLRPNDKCYASVFSSVDSSELGRQLHPLVIKDGFIHVVLVASA 414
Query: 256 -----------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
F E+ D SW ++IAG A+H ++ EA + M P+
Sbjct: 415 LSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPN 474
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+++ ++L AC L +G +VH ++++ + + + +++MY+KC L A +F
Sbjct: 475 DVSLSAILSACNIPECLLKGKEVHGHVLR-AYGRTTSINHCLVSMYSKCKDLQTARKLF- 532
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ D + +S+I+ + +EE LF MLA+ D + ++ CA MA
Sbjct: 533 DATPCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGFHIDRFLCSSIISICANMARPF 592
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
LH Y +K G+ D+ V + L+ +Y K G+L +RK+F+ ++ PD+V+W+++I GYA
Sbjct: 593 CGKLLHGYASKVGILSDLSVSSSLVKLYSKSGNLDDSRKVFDELDVPDLVTWTAIIDGYA 652
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
Q G +AL LF M GV P+ V LV VL+AC GLVEEG + M YG+ P
Sbjct: 653 QHGSSQDALALFDLMIRCGVKPDTVILVSVLSACGRNGLVEEGFKHFNSMRTVYGVEPVL 712
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
H C+VDLL R+G + EA+ FI M + +VW +LLA+
Sbjct: 713 HHYCCMVDLLGRSGRLVEAKSFIESMPVKPNSMVWSTLLAA 753
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 137/554 (24%), Positives = 259/554 (46%), Gaps = 56/554 (10%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQR-NVVSWTAMIAGCSQNYQENDAIKLYIQM 127
D + + ++++ K G L DA F+ R +VV W I+G +N + +++++ M
Sbjct: 106 DAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRNGEHALGVEMFLDM 165
Query: 128 LQ-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
++ S P FT+ ++ AC+ + +GR +H V++ + + +++ MY K +
Sbjct: 166 VRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFVGTSIVNMYVKCGQ 225
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+ A N F + ++V SW + IA F + + A+ EML G N++ S+
Sbjct: 226 MGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGV-AINKYTATSILL 284
Query: 247 ACSNFARI----------------------------------------LFNEIDS-PDLA 265
ACS + I +F E+D+ + +
Sbjct: 285 ACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQLCEKVFQEVDTVSNRS 344
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
W+A I+GV+ HS ++ L M + L P+ S+ + + G Q+H +
Sbjct: 345 IWSAFISGVSRHS-VQRSIQLLRRMLFQCLRPNDKCYASVFSSVD---SSELGRQLHPLV 400
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
IK GF V V +A+ TMY++C+ L ++ VF+E+ + D VSW S+IA H + E
Sbjct: 401 IKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEM-QEQDEVSWTSMIAGFATHGHSVEA 459
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
F++ M+A P+ ++ + ++ AC L ++H ++ + + + L+ +
Sbjct: 460 FQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLR-AYGRTTSINHCLVSM 518
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y KC L +ARKLF+ D + SS+I GYA G +EAL LF M + G +
Sbjct: 519 YSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGFHIDRFLC 578
Query: 506 VGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
+++ C+++ G LH Y ++ GI+ S +V L +++G + ++ ++
Sbjct: 579 SSIISICANMARPFCGKLLHGY---ASKVGILSDLSVSSSLVKLYSKSGNLDDSRKVFDE 635
Query: 564 MACDADIVVWKSLL 577
+ D+V W +++
Sbjct: 636 LDV-PDLVTWTAII 648
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 183/381 (48%), Gaps = 47/381 (12%)
Query: 43 SACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVV 102
S SS+ S +LGR++H ++ V++ + + MY +C L+D+ F++M +++ V
Sbjct: 382 SVFSSVDSSELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEV 441
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
SWT+MIAG + + +A ++ M+ G P + +I+ AC+ + G+++H HV
Sbjct: 442 SWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHV 501
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL 222
+++ +G + L++MY+K + AR +F KD SMI+ ++ GY EAL
Sbjct: 502 LRA-YGRTTSINHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEAL 560
Query: 223 CHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------------- 254
F ML G + + F+ S+ S C+N AR
Sbjct: 561 SLFQLMLAAG-FHIDRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKL 619
Query: 255 ------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
+F+E+D PDL +W A+I G A H ++ +A++LF M + PD + +
Sbjct: 620 YSKSGNLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVIL 679
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN---AILTMYAKCSVLCNALLVFKE 359
S+L AC GR L + H ++ + PV + ++ + + L A +
Sbjct: 680 VSVLSAC-GRNGLVEEGFKHFNSMRTVYGVE-PVLHHYCCMVDLLGRSGRLVEAKSFIES 737
Query: 360 LGKNADSVSWNSIIAACLQHN 380
+ +S+ W++++AAC H+
Sbjct: 738 MPVKPNSMVWSTLLAACRVHD 758
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 220/491 (44%), Gaps = 52/491 (10%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
+ + I T ++ ACS ++ +VH I+ S+ D V++ +++ Y G+++
Sbjct: 269 RSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQ 328
Query: 88 DARMGF---DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
F D + R++ W+A I+G S++ + +I+L +ML + P + S+
Sbjct: 329 LCEKVFQEVDTVSNRSI--WSAFISGVSRHSVQR-SIQLLRRMLFQCLRPNDKCYASVF- 384
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
S + S LGRQLH VIK ++ +AL MY++ + + D+ VF + +D S
Sbjct: 385 --SSVDSSELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVS 442
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------- 249
W SMIA F+ G+ +EA M+ G + PN+ ++ SAC+
Sbjct: 443 WTSMIAGFATHGHSVEAFQVLRNMIAEG-FTPNDVSLSAILSACNIPECLLKGKEVHGHV 501
Query: 250 ------------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
AR LF+ D +++I+G A++ + EA+S
Sbjct: 502 LRAYGRTTSINHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALS 561
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
LF M D S++ C + G +H Y K+G S++ V ++++ +Y+
Sbjct: 562 LFQLMLAAGFHIDRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYS 621
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
K L ++ VF EL D V+W +II QH +++ LF M+ +KPD +
Sbjct: 622 KSGNLDDSRKVFDEL-DVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILV 680
Query: 406 DVMGACAKMASLEM-VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME- 463
V+ AC + +E + T G+ + ++D+ + G L A+ M
Sbjct: 681 SVLSACGRNGLVEEGFKHFNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPV 740
Query: 464 NPDVVSWSSLI 474
P+ + WS+L+
Sbjct: 741 KPNSMVWSTLL 751
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 128/263 (48%), Gaps = 8/263 (3%)
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
Q++ K G + +C+ ++ + AK L +AL F++ V WN+ I+ +++
Sbjct: 93 QLYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRN 152
Query: 380 NQAEELFRLFSRML-ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+ +F M+ S +P+ T++ V+ ACA L + +H + + +DVFV
Sbjct: 153 GEHALGVEMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFV 212
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
++++Y+KCG +G+A F M +VVSW++ I G+ Q A+ L T M GV
Sbjct: 213 GTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGV 272
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHC--SCVVDLLARAGCVH 555
+ N T +L ACS ++ E ++ I+++E + +H ++ A AG V
Sbjct: 273 AINKYTATSILLACSQTSMIREANQVHGMIIKSELYL----DHVVKEALISTYANAGAVQ 328
Query: 556 EAEDFINQMACDADIVVWKSLLA 578
E ++ ++ +W + ++
Sbjct: 329 LCEKVFQEVDTVSNRSIWSAFIS 351
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 135/317 (42%), Gaps = 15/317 (4%)
Query: 267 WNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
WN I+G + + +F +M R P+ T +L AC L G VH +
Sbjct: 142 WNTAISGAVRNGEHALGVEMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMV 201
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
++ + +V V +I+ MY KC + A+ F + + VSW + IA +Q
Sbjct: 202 LRRDSEYDVFVGTSIVNMYVKCGQMGAAMNEFWRMPIR-NVVSWTTAIAGFVQQEDPVNA 260
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
L + ML S + + T ++ AC++ + + Q+H I K+ L D V L+
Sbjct: 261 MLLLTEMLRSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALIST 320
Query: 446 YIKCGSLGSARKLFNFMENPDVVS----WSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
Y G++ K+F + D VS WS+ I G ++ +++L RM + PN
Sbjct: 321 YANAGAVQLCEKVF---QEVDTVSNRSIWSAFISGVSRHSV-QRSIQLLRRMLFQCLRPN 376
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
V S V E G L+ ++ + G I S + + +R + ++
Sbjct: 377 DKCYASVF---SSVDSSELGRQLHPLVIKD-GFIHVVLVASALSTMYSRCNDLKDSYKVF 432
Query: 562 NQMACDADIVVWKSLLA 578
+M + D V W S++A
Sbjct: 433 EEMQ-EQDEVSWTSMIA 448
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 160/489 (32%), Positives = 265/489 (54%), Gaps = 34/489 (6%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F + + N++ W M G + + A+KLY+ M+ G++P +TF ++K+C+ +
Sbjct: 91 FKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAF 150
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+Q+H HV+K L +LI+MY + R+ DA VF +DV S+ ++I +
Sbjct: 151 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGY 210
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
+ GY +E A+ LF+EI D+ SWNA+I+
Sbjct: 211 ASRGY-IEN------------------------------AQKLFDEIPVKDVVSWNAMIS 239
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A N EA+ LF +M + PD T+ +++ AC ++ G QVH +I GF S
Sbjct: 240 GYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGS 299
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N+ + NA++ +Y+KC L A +F+ L D +SWN++I N +E LF M
Sbjct: 300 NLKIVNALIDLYSKCGELETACGLFERL-PYKDVISWNTLIGGYTHMNLYKEALLLFQEM 358
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFDVFVMNGLMDIYIKCG 450
L S P+ +T ++ ACA + ++++ +H YI K G+ + L+D+Y KCG
Sbjct: 359 LRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG 418
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ +A ++FN + + + SW+++I G+A G D + LF+RMR +G+ P+ +T VG+L+
Sbjct: 419 DIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 478
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSH G+++ G H++R M +Y + P EH C++DLL +G EAE+ IN M + D
Sbjct: 479 ACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDG 538
Query: 571 VVWKSLLAS 579
V+W SLL +
Sbjct: 539 VIWCSLLKA 547
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 173/346 (50%), Gaps = 33/346 (9%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+A +F I P+L WN + G A S+ A+ L+ M LLP+ T +L +C
Sbjct: 86 YAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCA 145
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG--------- 361
+G Q+H +++K+G D ++ V ++++MY + L +A VF +
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTA 205
Query: 362 -----------KNA----------DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+NA D VSWN++I+ + +E LF M+ + ++PD
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T V+ ACA+ S+E+ Q+H +I G ++ ++N L+D+Y KCG L +A LF
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
+ DV+SW++LI GY EAL LF M G +PN VT++ +L AC+H+G ++
Sbjct: 326 RLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI 385
Query: 521 G--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
G +H+Y I + G+ + ++D+ A+ G + A N +
Sbjct: 386 GRWIHVY-IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 181/421 (42%), Gaps = 75/421 (17%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ +C+ ++ + G+++H H+L C D+ + +++MY + G LEDA FDK
Sbjct: 136 TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS 195
Query: 97 PQRNVVS-------------------------------WTAMIAGCSQNYQENDAIKLYI 125
P R+VVS W AMI+G ++ +A++L+
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M+++ V P + T +++ AC+ GS+ LGRQ+H + GS+L NALI +Y+K
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A +F + KDV SW ++I ++ + EAL F EML G PN+ S+
Sbjct: 316 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSIL 374
Query: 246 SACSNFARI------------------------------------------LFNEIDSPD 263
AC++ I +FN I
Sbjct: 375 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 434
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
L+SWNA+I G A H A+ + LFS MR + PD +T LL AC L G +
Sbjct: 435 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFR 494
Query: 324 YIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ + + ++ + + A + + D V W S++ AC H
Sbjct: 495 TMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNV 554
Query: 383 E 383
E
Sbjct: 555 E 555
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 160/319 (50%), Gaps = 17/319 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + Y EAL + TN+R ST ++SAC+ S++LGR+VH I
Sbjct: 235 NAMISGYAETGNYKEALELFK-DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWID 293
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ + N ++++Y KCG LE A F+++P ++V+SW +I G + +A+
Sbjct: 294 DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALL 353
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA--QNALIAM 180
L+ +ML+SG P T SI+ AC+ LG++ +GR +H ++ K G + + +LI M
Sbjct: 354 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K I A VF+ I K ++SW +MI F+ G + F+ M G QP++
Sbjct: 414 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGI-QPDDIT 472
Query: 241 FGSVFSACS-----NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEM 290
F + SACS + R +F + +P L + +I + HS + M
Sbjct: 473 FVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI-DLLGHSGLFKEAEEMINM 531
Query: 291 RDRELLPDGLTVHSLLCAC 309
E+ PDG+ SLL AC
Sbjct: 532 --MEMEPDGVIWCSLLKAC 548
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 137/292 (46%), Gaps = 37/292 (12%)
Query: 321 VHSYIIKMGF-DSNVPVCNAI--LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
+H+ +IK+G ++N + I + L A+ VFK + + + + WN++
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI-QEPNLLIWNTMFRGHA 110
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
+ +L+ M++ + P+ TF V+ +CAK + + Q+H ++ K G D++
Sbjct: 111 LSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLY 170
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL---------------------- 475
V L+ +Y++ G L A K+F+ + DVVS+++LI
Sbjct: 171 VHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKD 230
Query: 476 ---------GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
GYA+ G EAL+LF M V P+ T+V V++AC+ G +E G ++
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH- 289
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +++G + + ++DL ++ G + A ++ D++ W +L+
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY-KDVISWNTLIG 340
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 173/607 (28%), Positives = 295/607 (48%), Gaps = 97/607 (15%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR- 99
+++ C L L+LGR+VH +L +V + N +++MYGKCGSL++A+ + M Q+
Sbjct: 140 VLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKD 199
Query: 100 ----------------------------------NVVSWTAMIAGCSQNYQENDAIKLYI 125
NVV+W+A+I G S N + ++++L+
Sbjct: 200 CVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFA 259
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M+ +GV P T S++ ACS + + +G++LH ++++ E S+ NAL+ MY +
Sbjct: 260 RMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCG 319
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A +FS ARK S+ +MI + + G +A F +M G +
Sbjct: 320 DMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVER---------- 369
Query: 246 SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
D SWN +I+G + ++A+ LF ++ + PD T+ S+
Sbjct: 370 -----------------DRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSI 412
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
L + QG ++HS I G SN V A++ MY KC+ + A + F E+ +
Sbjct: 413 LTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDT 472
Query: 366 SV----------------------------------SWNSIIAACLQHNQAEELFRLFSR 391
S +WNSI+A +++ Q + +LF+
Sbjct: 473 STWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNE 532
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M S ++PD T ++ AC+K+A++ Q+H Y + G D + L+D+Y KCGS
Sbjct: 533 MQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGS 592
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+ +++N + NP++V ++++ YA G G+E + +F RM V P+ VT + VL++
Sbjct: 593 IKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSS 652
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
C H G ++ G + +ME Y I PT +H +C+VDLL+RAG + EA I M +AD V
Sbjct: 653 CVHAGSIKIGYECFYLMET-YNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSV 711
Query: 572 VWKSLLA 578
W +LL
Sbjct: 712 TWSALLG 718
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 148/523 (28%), Positives = 240/523 (45%), Gaps = 72/523 (13%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P T + S SL LG+++H H + + +Q +L MY S EDA FD
Sbjct: 31 PLTSTTYSTILQSSNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFD 90
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ----FTFGSIIKACSGLG 150
KM +N+ SWTA++ L+ + L G+ G+ F F ++ C GLG
Sbjct: 91 KMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGL--GEKLDFFVFPVVLNICCGLG 148
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ LGRQ+H V+K +++ NALI MY K + +A+ V G+ +KD SW S+I
Sbjct: 149 DLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIIT 208
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNAL 270
A C N G V+ A +L +E++ P++ +W+A+
Sbjct: 209 A-----------CVAN---------------GVVYEALDLLENMLLSELE-PNVVTWSAV 241
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I G +S++ E++ LF+ M + PD T+ S+L AC L+ G ++H YI++
Sbjct: 242 IGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHEL 301
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVF---------------------------KEL--- 360
SN V NA++ MY +C + +A +F KEL
Sbjct: 302 FSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQ 361
Query: 361 ----GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
G D +SWN +I+ + + ++ LF +L I+PD T ++ A M
Sbjct: 362 MEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTC 421
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
+ ++H GL + FV L+++Y KC + +A+ F+ + D +W++LI G
Sbjct: 422 IRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISG 481
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
YA+ + +L RM+S G PN+ T +L GLVE
Sbjct: 482 YARCNQIGKIRELVERMKSDGFEPNVYTWNSILA-----GLVE 519
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/469 (20%), Positives = 191/469 (40%), Gaps = 118/469 (25%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T A ++ ACS ++ L +G+++H +I+ + + + N ++ MY +CG ++ A F K
Sbjct: 272 TLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKF 331
Query: 97 P-----------------------------------QRNVVSWTAMIAGCSQNYQENDAI 121
+R+ +SW MI+G N+ +DA+
Sbjct: 332 ARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDAL 391
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
L+ +L G+ P FT GSI+ + + + G+++H+ I S+ AL+ MY
Sbjct: 392 MLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMY 451
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL----------------GYELE----- 220
K + I+ A+ F I+ +D ++W ++I+ +++ G+E
Sbjct: 452 CKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWN 511
Query: 221 --------------ALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------ 254
A+ FNEM + +P+ + G + +ACS A I
Sbjct: 512 SILAGLVENKQYDLAMQLFNEM-QVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIR 570
Query: 255 ----------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
++N+I +P+L NA++ A H + E + +
Sbjct: 571 AGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVI 630
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
F M D + PD +T S+L +C+ ++ G + + + ++ + ++
Sbjct: 631 FRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLMETYNITPTLKHYTCMVDLLSR 690
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRL 388
L A + K + ADSV+W++++ C H + AE+L L
Sbjct: 691 AGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIEL 739
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 125/269 (46%), Gaps = 44/269 (16%)
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P T +S + LTL G Q+HS+ IK GF ++ V +L MY+ S +A +
Sbjct: 31 PLTSTTYSTILQSSNSLTL--GKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHM 88
Query: 357 FKELG-KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI--KPDHITFNDVMGACAK 413
F ++ KN S W +++ L + F LF L + K D F V+ C
Sbjct: 89 FDKMTLKNLHS--WTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCG 146
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL--------------- 458
+ LE+ Q+H + K G +V+V N L+D+Y KCGSL A+K+
Sbjct: 147 LGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSI 206
Query: 459 -------------FNFMEN-------PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
+ +EN P+VV+WS++I G++ E+++LF RM GV
Sbjct: 207 ITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGV 266
Query: 499 SPNLVTLVGVLTACSHVG--LVEEGLHLY 525
+P+ TL VL ACS + V + LH Y
Sbjct: 267 APDARTLASVLPACSRMKWLFVGKELHGY 295
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 176/584 (30%), Positives = 295/584 (50%), Gaps = 48/584 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
Y ++ C + +H IL D+ N +LN Y K G +DA FD+M
Sbjct: 51 AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM 110
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+RN VS+ + +Q Y D I LY ++ + G F S +K L +
Sbjct: 111 PERNNVSFVTL----AQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICP 166
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
LH+ ++K + S+ ALI Y+ + AR VF GI KD+ W +++ + + G
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENG 226
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSA-----CSNFAR------------------ 253
Y ++L + M G + PN + F + A +FA+
Sbjct: 227 YFEDSLKLLSCMRMAG-FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG 285
Query: 254 -----------------ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+FNE+ D+ W+ +IA + NEA+ LF MR+ ++
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVV 345
Query: 297 PDGLTVHSLLCAC-IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ T+ S+L C IG+ + G Q+H ++K+GFD ++ V NA++ +YAKC + A+
Sbjct: 346 PNEFTLSSILNGCAIGKCSGL-GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVK 404
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F EL + + VSWN++I + + F +F L +Q+ +TF+ +GACA +A
Sbjct: 405 LFAEL-SSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLA 463
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
S+++ Q+H KT A V V N L+D+Y KCG + A+ +FN ME DV SW++LI
Sbjct: 464 SMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALIS 523
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
GY+ G G +AL++ M+ PN +T +GVL+ CS+ GL+++G + M ++GI
Sbjct: 524 GYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIE 583
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P EH +C+V LL R+G + +A I + + +++W+++L++
Sbjct: 584 PCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 208/485 (42%), Gaps = 44/485 (9%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+ P + + SL ++ +H I+ + + ++N Y CGS++ AR
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSART 202
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
F+ + +++V W +++ +N D++KL M +G MP +TF + +KA GLG+
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGA 262
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ +H ++K+ + L+ +YT+ + DA VF+ + + DV W MIA
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------------- 249
F + G+ EA+ F M PNEF S+ + C+
Sbjct: 323 FCQNGFCNEAVDLFIRM-REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL 381
Query: 250 ------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
+ A LF E+ S + SWN +I G + +A S+F E
Sbjct: 382 DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREAL 441
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
++ +T S L AC ++ G+QVH IK V V N+++ MYAKC +
Sbjct: 442 RNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIK 501
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A VF E+ + D SWN++I+ H + R+ M KP+ +TF V+ C
Sbjct: 502 FAQSVFNEM-ETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGC 560
Query: 412 AKMASLEMVTQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVS 469
+ ++ + I G+ + ++ + + G L A KL + P V+
Sbjct: 561 SNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMI 620
Query: 470 WSSLI 474
W +++
Sbjct: 621 WRAML 625
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 186/405 (45%), Gaps = 53/405 (13%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ + A L + + VH IL + D + +L +Y + G + DA F++M
Sbjct: 249 TFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEM 308
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+ +VV W+ MIA QN N+A+ L+I+M ++ V+P +FT SI+ C+ LG
Sbjct: 309 PKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGE 368
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
QLH V+K + NALI +Y K +++ A +F+ ++ K+ SW ++I + LG
Sbjct: 369 QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLG 428
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-------------------------- 250
+A F E L + E F S AC++
Sbjct: 429 EGGKAFSMFREALRN-QVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS 487
Query: 251 --------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
FA+ +FNE+++ D+ASWNALI+G ++H +A+ + M+DR+
Sbjct: 488 NSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCK 547
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC----NAILTMYAKCSVLCN 352
P+GLT +L C + QG + +I+ D + C ++ + + L
Sbjct: 548 PNGLTFLGVLSGCSNAGLIDQGQECFESMIR---DHGIEPCLEHYTCMVRLLGRSGQLDK 604
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
A+ + + + + W ++++A + N E F+R A +I
Sbjct: 605 AMKLIEGIPYEPSVMIWRAMLSASMNQNNEE-----FARRSAEEI 644
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 159/386 (41%), Gaps = 73/386 (18%)
Query: 132 VMPG--QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK--FDRI 187
++PG +G++++ C + +H ++K L A N L+ Y K FD+
Sbjct: 43 IIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDK- 101
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
DA N+F + ++ S+ ++ GY + LH ++ N +F S
Sbjct: 102 -DALNLFDEMPERNNVSFVTLAQ-----GYACQDPIGLYSRLHREGHELNPHVFTSFLK- 154
Query: 248 CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC 307
LF +D ++ W
Sbjct: 155 -------LFVSLDKAEICPW---------------------------------------- 167
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
+HS I+K+G+DSN V A++ Y+ C + +A VF+ + D V
Sbjct: 168 -------------LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGI-LCKDIV 213
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
W I++ +++ E+ +L S M + P++ TF+ + A + + + +H I
Sbjct: 214 VWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQI 273
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
KT D V GL+ +Y + G + A K+FN M DVV WS +I + Q G +EA+
Sbjct: 274 LKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAV 333
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACS 513
LF RMR V PN TL +L C+
Sbjct: 334 DLFIRMREAFVVPNEFTLSSILNGCA 359
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 125/252 (49%), Gaps = 16/252 (6%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPS-------TYAGLISACSSLRSLQLGRKVH 58
++ C+ NEA+ + IR+R + T + +++ C+ + LG ++H
Sbjct: 320 IARFCQNGFCNEAVDLF--------IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLH 371
Query: 59 DHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
++ D+ + N ++++Y KC ++ A F ++ +N VSW +I G +
Sbjct: 372 GLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGG 431
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
A ++ + L++ V + TF S + AC+ L S+ LG Q+H IK+ + + N+LI
Sbjct: 432 KAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLI 491
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
MY K I A++VF+ + DV SW ++I+ +S G +AL +++ +PN
Sbjct: 492 DMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQAL-RILDIMKDRDCKPNG 550
Query: 239 FIFGSVFSACSN 250
F V S CSN
Sbjct: 551 LTFLGVLSGCSN 562
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 10/187 (5%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ + T++ + AC+SL S+ LG +VH + + V + N +++MY KCG ++ A+
Sbjct: 445 VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQ 504
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F++M +V SW A+I+G S + A+++ M P TF ++ CS G
Sbjct: 505 SVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAG 564
Query: 151 SVCLGRQLHAHVIKSEHG-----SHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTS 204
+ G++ +I+ +HG H L+ + D+ A + GI V
Sbjct: 565 LIDQGQECFESMIR-DHGIEPCLEHYTCMVRLLGRSGQLDK---AMKLIEGIPYEPSVMI 620
Query: 205 WGSMIAA 211
W +M++A
Sbjct: 621 WRAMLSA 627
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 135/289 (46%), Gaps = 15/289 (5%)
Query: 295 LLPDGLTVHS---LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
++P GL H+ +L CI + +H I+K G ++ N +L Y K
Sbjct: 43 IIP-GLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDK 101
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+AL +F E+ + ++VS+ ++ Q ++ L+SR+ + + F +
Sbjct: 102 DALNLFDEMPER-NNVSFVTLA----QGYACQDPIGLYSRLHREGHELNPHVFTSFLKLF 156
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ E+ LH I K G + FV L++ Y CGS+ SAR +F + D+V W+
Sbjct: 157 VSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWA 216
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE--EGLHLYRIME 529
++ Y + G +++LKL + MR G PN T L A +G + +G+H +I++
Sbjct: 217 GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVH-GQILK 275
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
Y + P ++ L + G + +A N+M + D+V W ++A
Sbjct: 276 TCYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMPKN-DVVPWSFMIA 321
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 161/492 (32%), Positives = 267/492 (54%), Gaps = 37/492 (7%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FD + + N++ W M G + + A+KLY+ M+ G++P +TF ++K+C+
Sbjct: 46 FDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIR 105
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+Q+H HV+K + +LI+MY + R+ DAR VF + +DV S+ ++IA +
Sbjct: 106 KEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGY 165
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
GY +E+ A+ LF+EI D+ SWNA+I+
Sbjct: 166 VSRGY-IES------------------------------AQKLFDEIPGKDVVSWNAMIS 194
Query: 273 GVASHSNANEAMSLFSEMRD-RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
G N EA+ LF EM + PD T+ +++ AC ++ G VHS+I GF
Sbjct: 195 GYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFA 254
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
SN+ + NA++ +Y+K + A +F L N D +SWN++I N +E LF
Sbjct: 255 SNLKIVNALIDLYSKFGEVETACELFDGLW-NKDVISWNTLIGGYTHMNLYKEALLLFQE 313
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT--GLAFDVF-VMNGLMDIYIK 448
ML S P+ +T ++ ACA + ++++ +H YI K G+ +V + L+D+Y K
Sbjct: 314 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAK 373
Query: 449 CGSLGSARKLFNF-MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
CG + +A+++F+ M N + +W+++I G+A G + A +F+RMR G+ P+ +T VG
Sbjct: 374 CGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVG 433
Query: 508 VLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
+L+ACSH G+++ G +++R M Y I P EH C++DLL +G EAE+ IN M +
Sbjct: 434 LLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPME 493
Query: 568 ADIVVWKSLLAS 579
D V+W SLL +
Sbjct: 494 PDGVIWCSLLKA 505
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 184/362 (50%), Gaps = 35/362 (9%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+A +F+ I P+L WN + G A S+ A+ L+ M LLPD T LL +C
Sbjct: 41 YAISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCA 100
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK------------ 358
+G Q+H +++K+GFD ++ V ++++MYA+ L +A VF
Sbjct: 101 KSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTA 160
Query: 359 ------------------ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA-SQIKP 399
+ D VSWN++I+ ++ +E LF M+ + ++P
Sbjct: 161 LIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRP 220
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D T V+ ACA+ S+E+ +H +I G A ++ ++N L+D+Y K G + +A +LF
Sbjct: 221 DESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELF 280
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ + N DV+SW++LI GY EAL LF M G +PN VT++ +L AC+H+G ++
Sbjct: 281 DGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 340
Query: 520 EG--LHLYRIMENEYGIIPTREHC-SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
G +H+Y I + G++ + ++D+ A+ G + A+ + + + W ++
Sbjct: 341 IGRWIHVY-INKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAM 399
Query: 577 LA 578
++
Sbjct: 400 IS 401
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 193/441 (43%), Gaps = 82/441 (18%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD-- 94
T+ L+ +C+ + + G+++H H+L D+ + +++MY + G LEDAR FD
Sbjct: 91 TFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDIS 150
Query: 95 -----------------------------KMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
++P ++VVSW AMI+G + +A++L+
Sbjct: 151 SHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFK 210
Query: 126 QMLQ-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
+M+ + V P + T +++ AC+ S+ LGR +H+ + S+L NALI +Y+KF
Sbjct: 211 EMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKF 270
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ A +F G+ KDV SW ++I ++ + EAL F EML G PN+ S+
Sbjct: 271 GEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSI 329
Query: 245 FSACSNFARILFN---------------------------------EIDSPD-------- 263
AC++ I +ID+
Sbjct: 330 LPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMS 389
Query: 264 ---LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
L++WNA+I+G A H AN A +FS MR + PD +T LL AC L G
Sbjct: 390 NRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRN 449
Query: 321 VHSYIIKMGFD--SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
+ + + G++ + ++ + + A + + D V W S++ AC
Sbjct: 450 IFRSMTR-GYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKI 508
Query: 379 HNQAEELFRLFSRMLASQIKP 399
H EL F++ L +I+P
Sbjct: 509 HGNL-ELGESFAKKLI-KIEP 527
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 161/323 (49%), Gaps = 22/323 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + Y EAL + TN+R ST ++SAC+ S++LGR VH I
Sbjct: 190 NAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWIN 249
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ + N ++++Y K G +E A FD + ++V+SW +I G + +A+
Sbjct: 250 DHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALL 309
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG-----SHLIAQNAL 177
L+ +ML+SG P T SI+ AC+ LG++ +GR +H ++ K G S L Q +L
Sbjct: 310 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSL--QTSL 367
Query: 178 IAMYTKFDRILDARNVF-SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
I MY K I A+ VF S ++ + +++W +MI+ F+ G A F+ M +G +P
Sbjct: 368 IDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGI-EP 426
Query: 237 NEFIFGSVFSACS-----NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMSL 286
++ F + SACS + R +F + +P L + +I + EA +
Sbjct: 427 DDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEM 486
Query: 287 FSEMRDRELLPDGLTVHSLLCAC 309
+ M + PDG+ SLL AC
Sbjct: 487 INTM---PMEPDGVIWCSLLKAC 506
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 247/490 (50%), Gaps = 41/490 (8%)
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD 189
SG P TF S++K C+ + GR +HA + +A AL MY K R D
Sbjct: 219 SGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGD 278
Query: 190 ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
AR VF + +D +W +++A +++ G A+ M +P+ SV AC+
Sbjct: 279 ARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACA 338
Query: 250 NF----------------------------------------ARILFNEIDSPDLASWNA 269
+ AR +F+ + + SWNA
Sbjct: 339 DAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNA 398
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
+I G A + +A EA++LF M + ++V + L AC L +G +VH ++++G
Sbjct: 399 MIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIG 458
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
+SNV V NA++TMY KC A VF ELG VSWN++I C Q+ +E+ RLF
Sbjct: 459 LESNVNVMNALITMYCKCKRTDLAAQVFDELGYKT-RVSWNAMILGCTQNGSSEDAVRLF 517
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
SRM +KPD T ++ A A ++ +H Y + L DV+V+ L+D+Y KC
Sbjct: 518 SRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKC 577
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
G + AR LFN + V++W+++I GY G G A++LF M+S G PN T + VL
Sbjct: 578 GRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVL 637
Query: 510 TACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
+ACSH GLV+EG + M+ +YG+ P EH +VDLL RAG +HEA FI +M +
Sbjct: 638 SACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPG 697
Query: 570 IVVWKSLLAS 579
I V+ ++L +
Sbjct: 698 ISVYGAMLGA 707
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 189/416 (45%), Gaps = 41/416 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L+ C++ L GR VH + P+ + + NMY KC DAR FD+M
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGLGSVCLG 155
P R+ V+W A++AG ++N A+ + ++M + G P T S++ AC+ ++
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGAC 346
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R++HA ++ + A++ +Y K + AR VF G+ ++ SW +MI +++
Sbjct: 347 REVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAEN 406
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFG--------------------------------- 242
G EAL F M+ G + +
Sbjct: 407 GDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVM 466
Query: 243 ----SVFSAC--SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+++ C ++ A +F+E+ SWNA+I G + ++ +A+ LFS M+ +
Sbjct: 467 NALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVK 526
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD T+ S++ A Q +H Y I++ D +V V A++ MYAKC + A +
Sbjct: 527 PDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSL 586
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
F ++ ++WN++I H + LF M +S P+ TF V+ AC+
Sbjct: 587 FNS-ARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACS 641
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 137/270 (50%), Gaps = 5/270 (1%)
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL-PDGLTVHSLLCACIGRLTLYQGM 319
+PD +A + AS S+ A++ F+ M P T SLL C R L G
Sbjct: 188 APD--DHHARLRAAASRSDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGR 245
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
VH+ + G A+ MYAKC +A VF + D V+WN+++A ++
Sbjct: 246 AVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPAR-DRVAWNALVAGYARN 304
Query: 380 NQAEELFRLFSRMLASQ-IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
AE + RM +PD +T V+ ACA +L ++H + + G V V
Sbjct: 305 GLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNV 364
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
++D+Y KCG++ SARK+F+ M++ + VSW+++I GYA+ G EAL LF RM GV
Sbjct: 365 STAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGV 424
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
V+++ L AC +G ++EG ++ ++
Sbjct: 425 DVTDVSVLAALHACGELGFLDEGRRVHELL 454
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 199/472 (42%), Gaps = 45/472 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N V+ + L A+ Q R T ++ AC+ ++L R+VH +
Sbjct: 295 NALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAV 354
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
V + IL++Y KCG+++ AR FD M RN VSW AMI G ++N +A+
Sbjct: 355 RGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALA 414
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ +M+ GV + + + AC LG + GR++H +++ S++ NALI MY
Sbjct: 415 LFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYC 474
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K R A VF + K SW +MI ++ G +A+ F+ M +P+ F
Sbjct: 475 KCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENV-KPDSFTLV 533
Query: 243 SVFSACSN----------------------------------------FARILFNEIDSP 262
S+ A ++ AR LFN
Sbjct: 534 SIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDR 593
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+ +WNA+I G SH + A+ LF EM+ +P+ T S+L AC + +G +
Sbjct: 594 HVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYF 653
Query: 323 SYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
S + + G + + ++ + + L A +++ + +++ AC H
Sbjct: 654 SSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKN 713
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGL 432
E R+ +++P+ ++ ++ ASL + V ++ + K GL
Sbjct: 714 VELAEESAQRIF--ELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGL 763
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 171/565 (30%), Positives = 296/565 (52%), Gaps = 35/565 (6%)
Query: 18 ALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHIL 77
+L+ S + ++ + P + L+S+C+ ++SL GR++H HI+ + +L ++
Sbjct: 159 SLIRLHASSASQDLIVHP--ISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLV 216
Query: 78 NMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQF 137
Y L DA + + + W +I+ +N A+ Y QM++ G+ P F
Sbjct: 217 TFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNF 276
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
T+ S++KAC + G+++H + S LI NALI+MY K ++ AR++F I
Sbjct: 277 TYPSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKI 336
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFN 257
+D SW SMI+ ++ +G +NE +FGS+++ I+
Sbjct: 337 PERDAVSWNSMISVYASMGM-------WNEAFE---------LFGSMWAEDIELNIII-- 378
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC--IGRLTL 315
WN + G N A+ L S+MR D + + L AC IG L
Sbjct: 379 ---------WNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIGLGACSHIGDAKL 429
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
G ++HS+ I+ F V N+++TMY++C L +A L+F +L + +SWNSII+
Sbjct: 430 --GKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLF-QLMEAKSLISWNSIISG 486
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
C +++EE L ML S I+P+++T V+ CA++A+L+ + HCY+T+ D
Sbjct: 487 CCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKD 546
Query: 436 -VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
+ + N L+D+Y + G + AR++F+ + D ++++S+I GY G G ALKLF M
Sbjct: 547 HLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMN 606
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCV 554
+ + P+ +T++ VL+ACSH GLV +G L+ M + YG+ P EH +C+ DL RAG +
Sbjct: 607 NFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLL 666
Query: 555 HEAEDFINQMACDADIVVWKSLLAS 579
++A++ I M +W +L+ +
Sbjct: 667 NKAKEIIRNMPYKPTPAMWATLIGA 691
>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
Length = 941
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 178/613 (29%), Positives = 299/613 (48%), Gaps = 53/613 (8%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
EA+ ++ N ++ +T ++ AC+++ + + GR++H +L + + N
Sbjct: 294 EAIKTFEL-MNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAA 352
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
++Y KC + DA F +P ++ VSW A+++ ++ DAI L QM G +P
Sbjct: 353 ASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDD 412
Query: 137 FTFGSIIKACSGLG---------SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
TF +I+ +CS S+ GRQ+H+ +I + N L+ MY + +
Sbjct: 413 ITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSL 472
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
DAR F GI +++V SW +I+ + G E L M G + N+ F S+ A
Sbjct: 473 DDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGT-EANKITFISLLGA 531
Query: 248 CS----------------------------------------NFARILFNEIDSPDLASW 267
CS + AR++F + D+ SW
Sbjct: 532 CSVTGDLSLGKTIHERIRTKGLESDIITSNALLNMYTTCESLDEARLVFERMVFRDVVSW 591
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
+I+ A EA+ L+ M PD +T+ S+L AC L +G +H I+
Sbjct: 592 TIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHERIVA 651
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
G +++V V A+++ Y KC + +A VF + + D V WN++I A Q++ E+ F
Sbjct: 652 SGVETDVFVGTAVVSFYGKCEAVEDARQVFDRI-LDKDIVCWNAMIGAYAQNHCEEKAFA 710
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
L+ M+ +Q+ P+ +T ++ +C+ +E + LH G V+N L+++Y
Sbjct: 711 LYLEMVENQMPPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYA 770
Query: 448 KC-GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KC G+L +A+ F + + +VVSWSS++ YA+ G D A LF M GV PN+VT
Sbjct: 771 KCCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFT 830
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
VL ACSH GL +EG + M+ ++ + PT EH C+V+LLA++G V +A F++ M
Sbjct: 831 SVLHACSHAGLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPV 890
Query: 567 DADIVVWKSLLAS 579
D W+SLL +
Sbjct: 891 QPDASAWRSLLGA 903
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 166/525 (31%), Positives = 251/525 (47%), Gaps = 55/525 (10%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+SAC++L G+++H IL S V+L N ++ MYGKCGS+E+AR FD+MP+R++
Sbjct: 17 VSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEARNAFDRMPERDL 76
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
+SW AMI +Q+ AI+LY G P + TF S++ AC G + GR LH H
Sbjct: 77 ISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLKFGRMLHEH 136
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
+ + S I N LI+MY+ + DA VF R DV +W ++IAA+++ G A
Sbjct: 137 FLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRHGKLECA 196
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------------ 251
+++M H + NE F +V CS+
Sbjct: 197 FATWSKM-HQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRMENSLIS 255
Query: 252 -----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
AR +F I P + SW+A IA H EA+ F M + P+
Sbjct: 256 MYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHW---EAIKTFELMNLEGVKPNAT 312
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
T+ S+L AC QG ++H+ ++ + N V NA ++YAKCS + +A VF +
Sbjct: 313 TLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSI 372
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA----- 415
D+VSWN+I++A + + L +M PD ITF ++ +C++ A
Sbjct: 373 -PCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQY 431
Query: 416 ----SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
SL Q+H + GL D ++ N L+ +Y +CGSL AR F + +V SW+
Sbjct: 432 GNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWT 491
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
LI Q G E L+L M G N +T + +L ACS G
Sbjct: 492 ILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTG 536
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 172/594 (28%), Positives = 284/594 (47%), Gaps = 59/594 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+A L++AC + L+ GR +H+H L + D ++ N +++MY CGSL+DA F+
Sbjct: 113 TFASLLNACFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWS 172
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ +V +WT +IA +++ + A + +M Q G+ + TF +++ CS L + G+
Sbjct: 173 FRPDVCTWTTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGK 232
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD-ARNVFSGIARKDVTSWGSMIAAFSKL 215
+H + S L +N+LI+MY K R D AR VF I+R V SW + IAA+
Sbjct: 233 HVHRLALGSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAY--- 289
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G EA+ F E+++ +PN SV AC+
Sbjct: 290 GQHWEAIKTF-ELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTV 348
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A +F+ I D SWNA+++ A +A+ L +M+
Sbjct: 349 LNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGF 408
Query: 296 LPDGLTVHSLLCACIGRLTLYQ---------GMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
+PD +T ++L +C L Q G QVHS +I G D + + N ++ MY +
Sbjct: 409 VPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGR 468
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
C L +A F+ + + + SW +I+ +Q+ +A E L M + + ITF
Sbjct: 469 CGSLDDARAAFQGIHQR-NVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFIS 527
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
++GAC+ L + +H I GL D+ N L+++Y C SL AR +F M D
Sbjct: 528 LLGACSVTGDLSLGKTIHERIRTKGLESDIITSNALLNMYTTCESLDEARLVFERMVFRD 587
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY- 525
VVSW+ +I YA G EAL+L+ RM P+ VTL+ VL AC+ + + EG ++
Sbjct: 588 VVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHE 647
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
RI+ + G+ + VV + V +A +++ D DIV W +++ +
Sbjct: 648 RIVAS--GVETDVFVGTAVVSFYGKCEAVEDARQVFDRI-LDKDIVCWNAMIGA 698
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 169/599 (28%), Positives = 283/599 (47%), Gaps = 56/599 (9%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED-A 89
+R T+ ++ CSSL L+ G+ VH L S + ++N +++MYGKC D A
Sbjct: 208 LRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRMENSLISMYGKCSRHPDEA 267
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R F ++ + +V+SW+A IA Q+++ AIK + M GV P T S+++AC+ +
Sbjct: 268 REVFLRISRPSVISWSAFIAAYGQHWE---AIKTFELMNLEGVKPNATTLTSVLRACATV 324
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G+ GR++HA V+ + + NA ++Y K R+ DA VFS I KD SW +++
Sbjct: 325 GAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIV 384
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------- 249
+A++K G +A+ +M G + P++ F ++ +CS
Sbjct: 385 SAYAKQGLFRDAIFLSRQMQVEG-FVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQV 443
Query: 250 -----------------------------NFARILFNEIDSPDLASWNALIAGVASHSNA 280
+ AR F I ++ SW LI+ + + A
Sbjct: 444 HSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEA 503
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
+E + L M + +T SLL AC L G +H I G +S++ NA+
Sbjct: 504 SEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESDIITSNAL 563
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
L MY C L A LVF+ + D VSW II+A E +L+ RM +PD
Sbjct: 564 LNMYTTCESLDEARLVFERMVFR-DVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPD 622
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
+T V+ ACA + +L +H I +G+ DVFV ++ Y KC ++ AR++F+
Sbjct: 623 AVTLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDARQVFD 682
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
+ + D+V W+++I YAQ C ++A L+ M + PN VTL+ +L +CS +E
Sbjct: 683 RILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITLLDSCSSTCKMER 742
Query: 521 GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G L+R G + + ++++ A+ EA + ++V W S++A+
Sbjct: 743 GSSLHREAAAR-GYLSHTSVVNALINMYAKCCGNLEAAQTAFESVASKNVVSWSSIVAA 800
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 148/534 (27%), Positives = 245/534 (45%), Gaps = 75/534 (14%)
Query: 3 NDYVSSLCKQNLYNEAL-------VAYDFSQNNTNIRIRPS-TYAGLISACSSLRSLQLG 54
N VS+ KQ L+ +A+ V + T I I S + + L+ + +SL G
Sbjct: 381 NAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTDG 440
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
R+VH ++ + D L N ++ MYG+CGSL+DAR F + QRNV SWT +I+ QN
Sbjct: 441 RQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQN 500
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
+ ++ ++L M G + TF S++ ACS G + LG+ +H + S +I
Sbjct: 501 GEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESDIITS 560
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
NAL+ MYT + + +AR VF + +DV SW +I+A++ GY LEAL + M +
Sbjct: 561 NALLNMYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFS- 619
Query: 235 QPNEFIFGSVFSACSNF----------------------------------------ARI 254
+P+ SV AC++ AR
Sbjct: 620 RPDAVTLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDARQ 679
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+F+ I D+ WNA+I A + +A +L+ EM + ++ P+ +T+ +LL +C
Sbjct: 680 VFDRILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITLLDSCSSTCK 739
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
+ +G +H G+ S+ V NA++ MYAKC A E + + VSW+SI+A
Sbjct: 740 MERGSSLHREAAARGYLSHTSVVNALINMYAKCCGNLEAAQTAFESVASKNVVSWSSIVA 799
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
A ++ + + LF M + P+ +TF V+ AC+ H + G ++
Sbjct: 800 AYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACS-----------HAGLADEGWSY 848
Query: 435 DVFVMNG-------------LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
M G ++++ K G + A + M PD +W SL+
Sbjct: 849 -FLSMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSLL 901
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 201/431 (46%), Gaps = 46/431 (10%)
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
GV + T + + AC+ LG G+Q+HA ++ S G+ ++ N+L+ MY K + +A
Sbjct: 5 GVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEA 64
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS- 249
RN F + +D+ SW +MI +++ +A+ + G +P+E F S+ +AC
Sbjct: 65 RNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGT-KPDEVTFASLLNACFA 123
Query: 250 ----NFARIL-----------------------------------FNEIDSPDLASWNAL 270
F R+L F PD+ +W +
Sbjct: 124 SGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTV 183
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
IA H A + +S+M L + +T ++L C L G VH + G
Sbjct: 184 IAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGL 243
Query: 331 DSNVPVCNAILTMYAKCSVLCN-ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
D ++ + N++++MY KCS + A VF + + + +SW++ IAA QH +A + F L
Sbjct: 244 DFSLRMENSLISMYGKCSRHPDEAREVFLRISRPS-VISWSAFIAAYGQHWEAIKTFEL- 301
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
M +KP+ T V+ ACA + + E ++H + + V+N +Y KC
Sbjct: 302 --MNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKC 359
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
+ A ++F+ + D VSW++++ YA+ G +A+ L +M+ G P+ +T + +L
Sbjct: 360 SRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITIL 419
Query: 510 TACSHVGLVEE 520
+CS L+++
Sbjct: 420 YSCSQSALLKQ 430
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 163/330 (49%), Gaps = 9/330 (2%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR F+ + DL SWNA+I A H +A+ L++ R PD +T SLL AC
Sbjct: 64 ARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFA 123
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
L G +H + + F S+ VCN +++MY+ C L +A VF E D +W +
Sbjct: 124 SGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVF-EWSFRPDVCTWTT 182
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+IAA +H + E F +S+M ++ + ITF V+ C+ + LE +H +G
Sbjct: 183 VIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSG 242
Query: 432 LAFDVFVMNGLMDIYIKCGS-LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
L F + + N L+ +Y KC AR++F + P V+SWS+ I Y Q EA+K F
Sbjct: 243 LDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHW---EAIKTF 299
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR-IMENEYGIIPTREHCSCVVDLLA 549
M GV PN TL VL AC+ VG E+G ++ ++ Y T + L A
Sbjct: 300 ELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTV--LNAAASLYA 357
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ V +A + + C D V W +++++
Sbjct: 358 KCSRVADASRVFSSIPCK-DAVSWNAIVSA 386
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 181/392 (46%), Gaps = 49/392 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L+ ACS L LG+ +H+ I + D++ N +LNMY C SL++AR+ F++M
Sbjct: 524 TFISLLGACSVTGDLSLGKTIHERIRTKGLESDIITSNALLNMYTTCESLDEARLVFERM 583
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+VVSWT +I+ + +A++LY +M Q P T S+++AC+ L ++ G+
Sbjct: 584 VFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGK 643
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H ++ S + + A+++ Y K + + DAR VF I KD+ W +MI A+++
Sbjct: 644 AIHERIVASGVETDVFVGTAVVSFYGKCEAVEDARQVFDRILDKDIVCWNAMIGAYAQNH 703
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
E +A + EM+ + PN+ ++ +CS+
Sbjct: 704 CEEKAFALYLEMVEN-QMPPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVV 762
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A+ F + S ++ SW++++A A + + A +LF M +
Sbjct: 763 NALINMYAKCCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDGV 822
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC----NAILTMYAKCSVLC 351
LP+ +T S+L AC +G SY + M D ++ ++ + AK +
Sbjct: 823 LPNIVTFTSVLHACSHAGLADEGW---SYFLSMQGDHHLEPTPEHYGCMVNLLAKSGRVK 879
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
A + D+ +W S++ AC H E
Sbjct: 880 QAASFMSAMPVQPDASAWRSLLGACEVHTDKE 911
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 17/289 (5%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP T ++ AC+SLR+L G+ +H+ I+ S + DV + +++ YGKC ++EDAR
Sbjct: 620 RPDAVTLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDARQ 679
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD++ +++V W AMI +QN+ E A LY++M+++ + P T +++ +CS
Sbjct: 680 VFDRILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITLLDSCSSTCK 739
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD-ARNVFSGIARKDVTSWGSMIA 210
+ G LH + SH NALI MY K L+ A+ F +A K+V SW S++A
Sbjct: 740 MERGSSLHREAAARGYLSHTSVVNALINMYAKCCGNLEAAQTAFESVASKNVVSWSSIVA 799
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-------FARILFNEID--- 260
A+++ G E A F M G PN F SV ACS+ ++ L + D
Sbjct: 800 AYARNGEEDRARNLFWTMNQDGVL-PNIVTFTSVLHACSHAGLADEGWSYFLSMQGDHHL 858
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
P + ++ +A +A S S M + PD SLL AC
Sbjct: 859 EPTPEHYGCMVNLLAKSGRVKQAASFMSAM---PVQPDASAWRSLLGAC 904
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 124/237 (52%), Gaps = 2/237 (0%)
Query: 292 DRELLP-DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
D E +P D +T+ + + AC QG Q+H+ I+ G ++V + N+++ MY KC +
Sbjct: 2 DLEGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSV 61
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
A F + + D +SWN++I QH ++ +L++ KPD +TF ++ A
Sbjct: 62 EEARNAFDRMPER-DLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNA 120
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
C L+ LH + T D V NGL+ +Y CGSL A +F + PDV +W
Sbjct: 121 CFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTW 180
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
+++I Y + G + A +++M G+ N +T + VL CS + ++E G H++R+
Sbjct: 181 TTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRL 237
>gi|225457865|ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
[Vitis vinifera]
Length = 711
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/608 (29%), Positives = 288/608 (47%), Gaps = 73/608 (12%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S YA L CSS ++ RKV H++ P + L N + YGKC L+DAR F++
Sbjct: 61 SLYARLFQICSSNLAIVEARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEE 120
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MPQR+ SW AMI +Q A+ L+ +M + G+ + TF S++ +C+ + ++ L
Sbjct: 121 MPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGSCATVLALFLS 180
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+Q+H ++K ++I ++L+ +Y K + DAR +F I + SW ++ + ++
Sbjct: 181 KQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEM 240
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA-------------RILFNE---- 258
G E EA+ F +M+ +P F F + ACS+ + RI ++E
Sbjct: 241 GNEKEAVVMFFKMI-RANIRPLNFTFSNALIACSSISALQEGIQIHGVAIRIGYDEDEVV 299
Query: 259 ----ID-------------------SPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
ID S +L SW ++++G A EA LF EM +R +
Sbjct: 300 SSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQTREARVLFDEMPERSV 359
Query: 296 LP-------------------------------DGLTVHSLLCACIGRLTLYQGMQVHSY 324
+ D +TV +L C G + G QVH +
Sbjct: 360 ISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVCAGLSDVESGKQVHGF 419
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
I + G SN+ V NA+L MY KC L + L F ++ D +SWN+++ + +H +EE
Sbjct: 420 IYRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEE 479
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
+F M + P T ++ ACA + +LE Q+H ++ + G DV L+D
Sbjct: 480 AMTIFGEM-QWETTPSKFTLGTLLSACANIFALEQGKQIHGFMIRNGYEIDVVARGALVD 538
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y KC L A K+F + D++ W+S+ILG G G + L LF M GV P+ +T
Sbjct: 539 MYSKCRCLEYALKVFKEAPSRDLILWNSMILGCCHNGRGRDVLGLFGLMEEEGVKPDHIT 598
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
G+L C GL G + M N+Y IIP EH +++L R G + E EDFI +M
Sbjct: 599 FQGILLGCICEGLAGLGTEYFNSMSNKYCIIPRLEHYESMIELYGRHGFMDELEDFIKRM 658
Query: 565 ACDADIVV 572
+ + +
Sbjct: 659 PFEPTVAM 666
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 149/278 (53%), Gaps = 11/278 (3%)
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
L C L + + +V S++I + + N + Y KCS L +A +F+E+ +
Sbjct: 66 LFQICSSNLAIVEARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEMPQR- 124
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
D SWN++I A Q AE+ LFSRM I + ITF V+G+CA + +L + Q+H
Sbjct: 125 DGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGSCATVLALFLSKQIH 184
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
I K G ++V + + L+DIY KC + AR++F+ +ENP+ +SW+ ++ Y + G
Sbjct: 185 GLIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEMGNEK 244
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY----RIMENEYGIIPTREH 540
EA+ +F +M + P T L ACS + ++EG+ ++ RI +E ++
Sbjct: 245 EAVVMFFKMIRANIRPLNFTFSNALIACSSISALQEGIQIHGVAIRIGYDEDEVV----- 299
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
S ++D+ A+ G + E+ I ++ +++ W S+++
Sbjct: 300 SSSLIDMYAKCGDL-ESACRIFELPSSKNLISWTSIVS 336
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 160/367 (43%), Gaps = 75/367 (20%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
EA+V + F NIR T++ + ACSS+ +LQ G ++H + D V+ +
Sbjct: 244 KEAVVMF-FKMIRANIRPLNFTFSNALIACSSISALQEGIQIHGVAIRIGYDEDEVVSSS 302
Query: 76 ILNMYGKCGSLE-------------------------------DARMGFDKMPQRNVVSW 104
+++MY KCG LE +AR+ FD+MP+R+V+SW
Sbjct: 303 LIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQTREARVLFDEMPERSVISW 362
Query: 105 TAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK 164
AM+AG + Q +A++ M ++ T G I+ C+GL V G+Q+H + +
Sbjct: 363 NAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVCAGLSDVESGKQVHGFIYR 422
Query: 165 SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR-KDVTSWGSMIAAFSKLGYELEALC 223
S+L NAL+ MY K + R F ++ +D SW +++ + ++ G EA+
Sbjct: 423 HGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEEAMT 482
Query: 224 HFNEMLHHGAYQPNEFIFGSVFSACSN--------------------------------- 250
F EM P++F G++ SAC+N
Sbjct: 483 IFGEM--QWETTPSKFTLGTLLSACANIFALEQGKQIHGFMIRNGYEIDVVARGALVDMY 540
Query: 251 -------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
+A +F E S DL WN++I G + + + LF M + + PD +T
Sbjct: 541 SKCRCLEYALKVFKEAPSRDLILWNSMILGCCHNGRGRDVLGLFGLMEEEGVKPDHITFQ 600
Query: 304 SLLCACI 310
+L CI
Sbjct: 601 GILLGCI 607
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%)
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
A L + S + AS + + + C+ ++ ++ ++ A +F++N
Sbjct: 41 AGRLRKAVSILFASPVPFPFSLYARLFQICSSNLAIVEARKVESHLITFSPAPPIFLLNR 100
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
++ Y KC L AR+LF M D SW+++I YAQ GC ++AL LF+RM LG+ N
Sbjct: 101 AIETYGKCSCLDDARELFEEMPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWAN 160
Query: 502 LVTLVGVLTACSHV 515
+T VL +C+ V
Sbjct: 161 EITFASVLGSCATV 174
>gi|302810303|ref|XP_002986843.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
gi|300145497|gb|EFJ12173.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
Length = 845
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/585 (30%), Positives = 302/585 (51%), Gaps = 56/585 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +++ACSS R L V+ +++ ++ + D ++ N +NM+ KCG L+ A F +M
Sbjct: 229 TFLAVLAACSSARDADL---VYGNVVEAEWETDTMVANASINMFSKCGCLDRAHDVFHRM 285
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ +V SW AM+A +Q+ ++A++L+ +M S V + T + C+ S+ G+
Sbjct: 286 KRWDVKSWNAMVAALAQHGFSSEALELFRRM-PSEVAVDKTTLVIALSTCAAPESLEDGK 344
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK-L 215
+H+ V + + ++A AL+ MY++ + +AR VF GI K+V SW +MIAA+ +
Sbjct: 345 SIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDE 404
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSA--CSNF---------------------- 251
AL F ML G +P +V SA C +
Sbjct: 405 SLHSRALEIFRLMLLDGV-RPTRTTALNVVSAVECQSVGKQLHGWIVDTGLYSDSFIGSA 463
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
AR +F +I D+ +WNA++ H EA+ FS M L +
Sbjct: 464 LVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRM-----LLE 518
Query: 299 GLTVHS----LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
G + + L + + + G ++H I + G +++ V NA+++MYA+C L +A
Sbjct: 519 GASGNRATFLLALSAVSPDRVSYGRKLHGLIAESGLEADNNVANALISMYARCKSLEDAR 578
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
F L ++ VSW S+IAAC+ +E LF RM +++PD +TF V+ AC +
Sbjct: 579 NTFDRL-EDKSIVSWTSVIAACVDLGSCQEAIDLFQRM---ELEPDRVTFTTVLEACTIV 634
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
++ +H + GL +VFV L+ ++ K G+LG AR++F +E P + W++++
Sbjct: 635 SAHREGKLVHSRARELGLESNVFVATALIHMHSKFGNLGEARRIFEAVEAPTLACWNAML 694
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
GYAQ G + F M+ GV+P+ +T + V++ACSH GLVE+G + M +YG+
Sbjct: 695 GGYAQTGHSQSVIDFFHAMQQRGVAPDHITFLAVVSACSHAGLVEKGARTFASMGPDYGV 754
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
E C++DLLARAG + EA DF+ M C V WK+LLA+
Sbjct: 755 GHGLEDYGCLIDLLARAGQLEEAYDFLQGMPCGPSDVTWKTLLAA 799
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 170/588 (28%), Positives = 283/588 (48%), Gaps = 62/588 (10%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S + L++ C+ + L V+ I D ++ M+ KC S+ DA F++
Sbjct: 29 SKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVVRMFIKCRSIHDASRVFEQ 88
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M R++V WT+M+ + + A + +M GV+P + TF SI+ AC L G
Sbjct: 89 MLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDRVTFISILNACESLAQ---G 145
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+H ++ S ++ NAL+ M K + A F + R+DV SW M+ A+++
Sbjct: 146 ELVHRLIVDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYARN 205
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------------- 249
G+ EA ++ ML G PN F +V +ACS
Sbjct: 206 GHIAEAFGYYLRMLLEGVV-PNNITFLAVLAACSSARDADLVYGNVVEAEWETDTMVANA 264
Query: 250 -----------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
+ A +F+ + D+ SWNA++A +A H ++EA+ LF M E+ D
Sbjct: 265 SINMFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRM-PSEVAVD 323
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
T+ L C +L G +HS + ++G +++V A++TMY++C L A VF
Sbjct: 324 KTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRVFD 383
Query: 359 E-LGKNADSVSWNSIIAACLQ----HNQAEELFRLFSRMLASQIKPDHITFNDVMGA--C 411
LGKN VSWN++IAA + H++A E+FRL ML ++P T +V+ A C
Sbjct: 384 GILGKNV--VSWNNMIAAYGRDESLHSRALEIFRL---MLLDGVRPTRTTALNVVSAVEC 438
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ QLH +I TGL D F+ + L+++Y + GSLG AR++F + DV +W+
Sbjct: 439 QSVGK-----QLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWN 493
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
+++ G EAL+ F+RM G S N T + L+A S V G L+ ++ E
Sbjct: 494 AIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLALSAVSP-DRVSYGRKLHGLIA-E 551
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G+ + ++ + AR + +A + +++ D IV W S++A+
Sbjct: 552 SGLEADNNVANALISMYARCKSLEDARNTFDRLE-DKSIVSWTSVIAA 598
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/519 (26%), Positives = 237/519 (45%), Gaps = 62/519 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N V++L + +EAL F + + + + +T +S C++ SL+ G+ +H +
Sbjct: 294 NAMVAALAQHGFSSEALEL--FRRMPSEVAVDKTTLVIALSTCAAPESLEDGKSIHSRVA 351
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQ-ENDAI 121
+ DVV ++ MY +CG L +AR FD + +NVVSW MIA ++ + A+
Sbjct: 352 RLGLETDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRAL 411
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+++ ML GV P + T +++ A +G+QLH ++ + S +AL+ MY
Sbjct: 412 EIFRLMLLDGVRPTRTTALNVVSAVE---CQSVGKQLHGWIVDTGLYSDSFIGSALVNMY 468
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG--------- 232
+ + DAR VF I +DV +W +++ G EAL F+ ML G
Sbjct: 469 ERTGSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFL 528
Query: 233 ----AYQPNEFIFG-----------------------SVFSACSNF--ARILFNEIDSPD 263
A P+ +G S+++ C + AR F+ ++
Sbjct: 529 LALSAVSPDRVSYGRKLHGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKS 588
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+ SW ++IA + EA+ LF M EL PD +T ++L AC +G VHS
Sbjct: 589 IVSWTSVIAACVDLGSCQEAIDLFQRM---ELEPDRVTFTTVLEACTIVSAHREGKLVHS 645
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS-WNSIIAACLQHNQA 382
++G +SNV V A++ M++K L A +F+ + A +++ WN+++ Q +
Sbjct: 646 RARELGLESNVFVATALIHMHSKFGNLGEARRIFEAV--EAPTLACWNAMLGGYAQTGHS 703
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG- 441
+ + F M + PDHITF V+ AC+ +E + T + D V +G
Sbjct: 704 QSVIDFFHAMQQRGVAPDHITFLAVVSACSHAGLVEKGAR-----TFASMGPDYGVGHGL 758
Query: 442 -----LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
L+D+ + G L A M P V+W +L+
Sbjct: 759 EDYGCLIDLLARAGQLEEAYDFLQGMPCGPSDVTWKTLL 797
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
Query: 386 FRLFSRMLASQ--IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
+L+ R SQ + DH F ++ CA+ L T ++ I G+ D F ++
Sbjct: 11 LQLWQRAFTSQPSVSDDHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVV 70
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
++IKC S+ A ++F M + +V W+S++ + D A F RM+ GV P+ V
Sbjct: 71 RMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDRV 130
Query: 504 TLVGVLTAC 512
T + +L AC
Sbjct: 131 TFISILNAC 139
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 182/583 (31%), Positives = 284/583 (48%), Gaps = 44/583 (7%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSK--CQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
A + C + + GR VH ++ Q D N +LN Y K G L AR FD M
Sbjct: 49 ARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGM 108
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+RN VS+ ++ G + + +A++L+ ++ + G F +I+K + + L
Sbjct: 109 PERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLAC 168
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+HA K H + ALI Y+ + AR VF GI KD +W +M++ +S+
Sbjct: 169 GIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSEND 228
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSA----------------------------- 247
AL F++M G ++PN F+ S A
Sbjct: 229 IPEYALNTFSKMRMTG-FKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVG 287
Query: 248 ---------CSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
C + A +F I D+ W+ LI+ A +A +F M ++
Sbjct: 288 GALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVV 347
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P+ ++ +L AC L G Q+H+ IK+G++S + V NA++ MYAKC + N+L +
Sbjct: 348 PNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEI 407
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F L ++A+ VSWN+II Q AE+ +F M A+ + +TF+ V+ ACA +S
Sbjct: 408 FSSL-QDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSS 466
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
++ Q+H I K+ D V N L+D Y KCG + A K+F + DVVSW+S+I
Sbjct: 467 IKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISA 526
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
YA G AL+LF RM + N VT V +L+ C GLV +GL L+ M ++ I P
Sbjct: 527 YALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKP 586
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ EH +C+V LL RAG + +A FI + +VW++LL+S
Sbjct: 587 SMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSS 629
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 179/393 (45%), Gaps = 42/393 (10%)
Query: 29 TNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
T + P + A L S LG+ +H + + + + +L+MY KCG +ED
Sbjct: 243 TGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIED 302
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A F+ +P +V+ W+ +I+ +Q+ Q A +++++M++S V+P +F+ +++AC+
Sbjct: 303 AHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACAN 362
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+ + LG Q+H IK + S L NAL+ MY K + ++ +FS + + SW ++
Sbjct: 363 IAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTI 422
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------- 254
I + + G+ +AL F+EM + F SV AC+N + I
Sbjct: 423 IVGYCQSGFAEDALSVFHEM-RAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKST 481
Query: 255 --------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
+F I D+ SWN++I+ A H A A+ LF
Sbjct: 482 FNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFD 541
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYAKC 347
M ++ + +T SLL C + QG+ + +S ++ ++ I+ + +
Sbjct: 542 RMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRA 601
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
L +AL ++ + W +++++C+ H
Sbjct: 602 GRLTDALKFIGDIPSTPSPMVWRALLSSCVVHK 634
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 134/306 (43%), Gaps = 13/306 (4%)
Query: 280 ANEAMSLFSEMRDRELLP--DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV- 336
ANEA+ + LP D L CI R G VH+ +++ G + +
Sbjct: 24 ANEALQWLDDELASLALPKLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTF 83
Query: 337 -CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
N +L YAK L A +F + + + VS+ +++ + EE LF R+
Sbjct: 84 CANVLLNFYAKLGPLATARRLFDGMPER-NRVSFVTLMQGYALRGEFEEALELFRRLQRE 142
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA 455
+ +H ++ M + + +H K G + FV L+D Y CG++ A
Sbjct: 143 GHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHA 202
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA--CS 513
R +F+ + D V+W++++ Y++ + AL F++MR G PN L L A C
Sbjct: 203 RCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCL 262
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHC-SCVVDLLARAGCVHEAEDFINQMACDADIVV 572
L+ +G+H + + T H ++D+ A+ G + +A + D D+++
Sbjct: 263 SSALLGKGIHGCSVKT----LYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHD-DVIL 317
Query: 573 WKSLLA 578
W L++
Sbjct: 318 WSFLIS 323
>gi|302142721|emb|CBI19924.3| unnamed protein product [Vitis vinifera]
Length = 912
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/608 (29%), Positives = 288/608 (47%), Gaps = 73/608 (12%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S YA L CSS ++ RKV H++ P + L N + YGKC L+DAR F++
Sbjct: 61 SLYARLFQICSSNLAIVEARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEE 120
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MPQR+ SW AMI +Q A+ L+ +M + G+ + TF S++ +C+ + ++ L
Sbjct: 121 MPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGSCATVLALFLS 180
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+Q+H ++K ++I ++L+ +Y K + DAR +F I + SW ++ + ++
Sbjct: 181 KQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEM 240
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA-------------RILFNE---- 258
G E EA+ F +M+ +P F F + ACS+ + RI ++E
Sbjct: 241 GNEKEAVVMFFKMI-RANIRPLNFTFSNALIACSSISALQEGIQIHGVAIRIGYDEDEVV 299
Query: 259 ----ID-------------------SPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
ID S +L SW ++++G A EA LF EM +R +
Sbjct: 300 SSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQTREARVLFDEMPERSV 359
Query: 296 LP-------------------------------DGLTVHSLLCACIGRLTLYQGMQVHSY 324
+ D +TV +L C G + G QVH +
Sbjct: 360 ISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVCAGLSDVESGKQVHGF 419
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
I + G SN+ V NA+L MY KC L + L F ++ D +SWN+++ + +H +EE
Sbjct: 420 IYRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEE 479
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
+F M + P T ++ ACA + +LE Q+H ++ + G DV L+D
Sbjct: 480 AMTIFGEM-QWETTPSKFTLGTLLSACANIFALEQGKQIHGFMIRNGYEIDVVARGALVD 538
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y KC L A K+F + D++ W+S+ILG G G + L LF M GV P+ +T
Sbjct: 539 MYSKCRCLEYALKVFKEAPSRDLILWNSMILGCCHNGRGRDVLGLFGLMEEEGVKPDHIT 598
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
G+L C GL G + M N+Y IIP EH +++L R G + E EDFI +M
Sbjct: 599 FQGILLGCICEGLAGLGTEYFNSMSNKYCIIPRLEHYESMIELYGRHGFMDELEDFIKRM 658
Query: 565 ACDADIVV 572
+ + +
Sbjct: 659 PFEPTVAM 666
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 149/278 (53%), Gaps = 11/278 (3%)
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
L C L + + +V S++I + + N + Y KCS L +A +F+E+ +
Sbjct: 66 LFQICSSNLAIVEARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEMPQR- 124
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
D SWN++I A Q AE+ LFSRM I + ITF V+G+CA + +L + Q+H
Sbjct: 125 DGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGSCATVLALFLSKQIH 184
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
I K G ++V + + L+DIY KC + AR++F+ +ENP+ +SW+ ++ Y + G
Sbjct: 185 GLIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEMGNEK 244
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY----RIMENEYGIIPTREH 540
EA+ +F +M + P T L ACS + ++EG+ ++ RI +E ++
Sbjct: 245 EAVVMFFKMIRANIRPLNFTFSNALIACSSISALQEGIQIHGVAIRIGYDEDEVV----- 299
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
S ++D+ A+ G + E+ I ++ +++ W S+++
Sbjct: 300 SSSLIDMYAKCGDL-ESACRIFELPSSKNLISWTSIVS 336
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 160/367 (43%), Gaps = 75/367 (20%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
EA+V + F NIR T++ + ACSS+ +LQ G ++H + D V+ +
Sbjct: 244 KEAVVMF-FKMIRANIRPLNFTFSNALIACSSISALQEGIQIHGVAIRIGYDEDEVVSSS 302
Query: 76 ILNMYGKCGSLE-------------------------------DARMGFDKMPQRNVVSW 104
+++MY KCG LE +AR+ FD+MP+R+V+SW
Sbjct: 303 LIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQTREARVLFDEMPERSVISW 362
Query: 105 TAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK 164
AM+AG + Q +A++ M ++ T G I+ C+GL V G+Q+H + +
Sbjct: 363 NAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVCAGLSDVESGKQVHGFIYR 422
Query: 165 SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR-KDVTSWGSMIAAFSKLGYELEALC 223
S+L NAL+ MY K + R F ++ +D SW +++ + ++ G EA+
Sbjct: 423 HGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEEAMT 482
Query: 224 HFNEMLHHGAYQPNEFIFGSVFSACSN--------------------------------- 250
F EM P++F G++ SAC+N
Sbjct: 483 IFGEM--QWETTPSKFTLGTLLSACANIFALEQGKQIHGFMIRNGYEIDVVARGALVDMY 540
Query: 251 -------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
+A +F E S DL WN++I G + + + LF M + + PD +T
Sbjct: 541 SKCRCLEYALKVFKEAPSRDLILWNSMILGCCHNGRGRDVLGLFGLMEEEGVKPDHITFQ 600
Query: 304 SLLCACI 310
+L CI
Sbjct: 601 GILLGCI 607
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%)
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
A L + S + AS + + + C+ ++ ++ ++ A +F++N
Sbjct: 41 AGRLRKAVSILFASPVPFPFSLYARLFQICSSNLAIVEARKVESHLITFSPAPPIFLLNR 100
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
++ Y KC L AR+LF M D SW+++I YAQ GC ++AL LF+RM LG+ N
Sbjct: 101 AIETYGKCSCLDDARELFEEMPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWAN 160
Query: 502 LVTLVGVLTACSHV 515
+T VL +C+ V
Sbjct: 161 EITFASVLGSCATV 174
>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 169/545 (31%), Positives = 282/545 (51%), Gaps = 34/545 (6%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
+ L+ +C++L+SL G+++H H + + +VL ++ Y L DA
Sbjct: 45 SSLLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDI 104
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
N + W +I+ N +A+ Y +M+ GV P FT+ S++KAC + GR++
Sbjct: 105 VNPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREV 164
Query: 159 HAHVIKS-EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
H + + H +L N+L++MY KF + AR +F+ + +D SW +I+ ++ G
Sbjct: 165 HESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGL 224
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASH 277
EA F EM GA ++ +WN + G
Sbjct: 225 WKEAFELFEEMRLAGA---------------------------EVNIITWNTIAGGCVQT 257
Query: 278 SNANEAMSLFSEMR--DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
N A+ L S+MR D +L P + + C+ IG + L G +H+ I+ FD
Sbjct: 258 RNFKGALELLSQMRRCDIDLDPVAMIIGLGACSHIGAIKL--GTVIHASAIRSCFDGFDN 315
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
V NA++TMY++C L +A ++FK + K +WNS+++ +++EE LF ML S
Sbjct: 316 VRNALITMYSRCKDLRHADILFKSI-KTKSLTTWNSMLSGYTHMDRSEEASFLFREMLFS 374
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYI-TKTGLAFDVFVMNGLMDIYIKCGSLGS 454
I+P+++T ++ CA++A+L+ + HCYI + G + + N L+++Y + G + S
Sbjct: 375 GIEPNYVTIASILPHCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLS 434
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
A+++F+ + D V+++SLI GY G G ALKLF M + P+ VT+V VL+ACSH
Sbjct: 435 AKRVFDSLRRRDKVTYTSLIAGYGIQGEGKTALKLFDEMIKHRIKPDQVTMVAVLSACSH 494
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
GLV EG L+ M YGI+P EH SC+VDL RAG +++A+ I M +W
Sbjct: 495 SGLVTEGNVLFEKMSTLYGIVPAVEHFSCMVDLFGRAGLLNKAKKVITSMPYRPTTAMWA 554
Query: 575 SLLAS 579
+L+ +
Sbjct: 555 TLVGA 559
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/461 (23%), Positives = 190/461 (41%), Gaps = 84/461 (18%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N +SS L+ EAL AY + + +RP TY ++ AC L GR+VH+
Sbjct: 111 NLLISSYVNNGLHGEALSAY---REMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHES 167
Query: 61 ILLSKCQP-DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
I + ++ + N +++MYGK G L+ AR F++MP+R+ VSW +I+ + +
Sbjct: 168 INAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKE 227
Query: 120 AIKLYIQMLQSGVMPGQFTFGSI-----------------------------------IK 144
A +L+ +M +G T+ +I +
Sbjct: 228 AFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLG 287
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
ACS +G++ LG +HA I+S +NALI MY++ + A +F I K +T+
Sbjct: 288 ACSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLTT 347
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------- 254
W SM++ ++ + EA F EML G +PN S+ C+ A +
Sbjct: 348 WNSMLSGYTHMDRSEEASFLFREMLFSGI-EPNYVTIASILPHCARVANLQQGKEFHCYI 406
Query: 255 -------------------------------LFNEIDSPDLASWNALIAGVASHSNANEA 283
+F+ + D ++ +LIAG A
Sbjct: 407 MRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGKTA 466
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILT 342
+ LF EM + PD +T+ ++L AC + +G + + + G V + ++
Sbjct: 467 LKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCMVD 526
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
++ + +L A V + + W +++ AC H E
Sbjct: 527 LFGRAGLLNKAKKVITSMPYRPTTAMWATLVGACRIHGNTE 567
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 117/216 (54%), Gaps = 8/216 (3%)
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
++ SLL +C +L QG Q+H++ I +GF++++ + ++T Y+ S+L +A +
Sbjct: 43 SISSLLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADA----HTI 98
Query: 361 GKNADSVS---WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
N+D V+ WN +I++ + + E + M+ ++PD+ T+ V+ AC + L
Sbjct: 99 TVNSDIVNPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDL 158
Query: 418 EMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
+ ++H I G ++++V N L+ +Y K G L +AR+LFN M D VSW+ +I
Sbjct: 159 DFGREVHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISN 218
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
YA G EA +LF MR G N++T + C
Sbjct: 219 YASRGLWKEAFELFEEMRLAGAEVNIITWNTIAGGC 254
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 10/204 (4%)
Query: 381 QAEELFRLFSRMLASQIKPDHI--TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+A E F L ++ AS D I + + ++ +C + SL QLH + G + +
Sbjct: 20 KAFETFSLI-KLHASSANRDAILHSISSLLYSCTNLKSLPQGKQLHAHTISLGFENHLVL 78
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVS---WSSLILGYAQFGCGDEALKLFTRMRS 495
+ L+ Y L A + N D+V+ W+ LI Y G EAL + M
Sbjct: 79 VPKLVTFYSSFSLLADAHTI---TVNSDIVNPLPWNLLISSYVNNGLHGEALSAYREMVH 135
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
GV P+ T VL AC ++ G ++ + YG + +V + + G +
Sbjct: 136 KGVRPDNFTYPSVLKACGEKLDLDFGREVHESINAAYGHRWNLYVHNSLVSMYGKFGELD 195
Query: 556 EAEDFINQMACDADIVVWKSLLAS 579
A NQM + D V W ++++
Sbjct: 196 AARRLFNQMP-ERDAVSWNGIISN 218
>gi|302788029|ref|XP_002975784.1| hypothetical protein SELMODRAFT_150748 [Selaginella moellendorffii]
gi|300156785|gb|EFJ23413.1| hypothetical protein SELMODRAFT_150748 [Selaginella moellendorffii]
Length = 590
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 177/566 (31%), Positives = 288/566 (50%), Gaps = 35/566 (6%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
NEA + ++ ++ IR T ++ ACS L G+KVH +I S+ + D+ LQ
Sbjct: 23 NEAFLLFERMESE-GIRPNAVTCLHVLGACSCQNELPFGKKVHAYISASEFKWDISLQTS 81
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSGVMP 134
++NMY KCG+LE AR F+++ +++V+SW+ MI+ +Q+ + ++AI++Y M ++ V P
Sbjct: 82 LVNMYAKCGNLEGARKVFNRLERKDVISWSTMISAYNQSGRHSEAIEIYRLMESETSVEP 141
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
TF +I AC+G G V GRQ+H ++ + + +AL+ +Y K + DA+ F
Sbjct: 142 NAVTFVGVIGACTGCGDVIRGRQVHGRLVSLGLETDVAVGSALVQLYVKCGNLEDAKKAF 201
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
+ ++DV W M++A+S+ G + + ++ M +PN + +V ACS
Sbjct: 202 DRVEKRDVLCWNFMLSAYSERGSPQQVIEAYDAM----DVEPNAVTYTNVLIACSAM--- 254
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
DLA + + S + L D SLL I +
Sbjct: 255 -------EDLA----------------QGQKVHSRIVSSGLETDMTMETSLLSLYIKCRS 291
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF-KELGKNADSVSWNSII 373
L QV + K D++V A+L MYA C L A VF + D V W ++I
Sbjct: 292 LKSACQVFEAMGKK--DTDVVTDTALLNMYAACGNLEAAKRVFGSRRDERRDVVFWTAMI 349
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
A+ Q + EE L+ ML+ +IKP+ +T+ V+ AC+ + ++ ++H +
Sbjct: 350 ASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILEGRKIHSSLEGKAEE 409
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
DV V N L+ +Y +CGSL A F + N DV SW+ ++ +A G AL+L M
Sbjct: 410 LDVAVQNSLLSLYARCGSLRDAWSCFAKIHNRDVFSWTGMVAAFAHHGHSARALELVREM 469
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
GVSP+ VT VL ACSH G +E G + M +Y + P+++H C+VDLLARAG
Sbjct: 470 ELCGVSPDAVTFQSVLHACSHEGSLERGWASFVSMAVDYAVEPSKDHYLCMVDLLARAGR 529
Query: 554 VHEAEDFINQMACDADIVVWKSLLAS 579
+ EA + I + + + + W LL +
Sbjct: 530 LAEAREVIQFVGLERESMGWMMLLGA 555
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 197/454 (43%), Gaps = 86/454 (18%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S+ + ++EA+ Y ++ T++ T+ G+I AC+ + GR+VH ++
Sbjct: 114 ISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGRQVHGRLVSLG 173
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ DV + + ++ +Y KCG+LEDA+ FD++ +R+V+ W M++ S+ I+ Y
Sbjct: 174 LETDVAVGSALVQLYVKCGNLEDAKKAFDRVEKRDVLCWNFMLSAYSERGSPQQVIEAYD 233
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M V P T+ +++ ACS + + G+++H+ ++ S + + + +L+++Y K
Sbjct: 234 AM---DVEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETSLLSLYIKCR 290
Query: 186 RILDARNVFSGIA-----------------------------------RKDVTSWGSMIA 210
+ A VF + R+DV W +MIA
Sbjct: 291 SLKSACQVFEAMGKKDTDVVTDTALLNMYAACGNLEAAKRVFGSRRDERRDVVFWTAMIA 350
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL--------------- 255
++++ G EAL + ML +PN + SV SACS+ IL
Sbjct: 351 SYAQAGRGEEALALYKTMLSE-EIKPNSVTYTSVLSACSSLGNILEGRKIHSSLEGKAEE 409
Query: 256 -------------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
F +I + D+ SW ++A A H ++ A+ L EM
Sbjct: 410 LDVAVQNSLLSLYARCGSLRDAWSCFAKIHNRDVFSWTGMVAAFAHHGHSARALELVREM 469
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV-PVCNAILTMY---AK 346
+ PD +T S+L AC +L +G + + M D V P + L M A+
Sbjct: 470 ELCGVSPDAVTFQSVLHACSHEGSLERGW---ASFVSMAVDYAVEPSKDHYLCMVDLLAR 526
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
L A V + +G +S+ W ++ A H+
Sbjct: 527 AGRLAEAREVIQFVGLERESMGWMMLLGASRTHS 560
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 146/286 (51%), Gaps = 20/286 (6%)
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ ++ SW+ +I A + NEA LF M + P+ +T +L AC + L G
Sbjct: 1 MQQKNVYSWSMMIGAYAQNGRRNEAFLLFERMESEGIRPNAVTCLHVLGACSCQNELPFG 60
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
+VH+YI F ++ + +++ MYAKC L A VF L + D +SW+++I+A Q
Sbjct: 61 KKVHAYISASEFKWDISLQTSLVNMYAKCGNLEGARKVFNRLERK-DVISWSTMISAYNQ 119
Query: 379 ---HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
H++A E++RL + ++P+ +TF V+GAC + Q+H + GL D
Sbjct: 120 SGRHSEAIEIYRLMES--ETSVEPNAVTFVGVIGACTGCGDVIRGRQVHGRLVSLGLETD 177
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
V V + L+ +Y+KCG+L A+K F+ +E DV+ W+ ++ Y++ G + ++ + M
Sbjct: 178 VAVGSALVQLYVKCGNLEDAKKAFDRVEKRDVLCWNFMLSAYSERGSPQQVIEAYDAM-- 235
Query: 496 LGVSPNLVTLVGVLTACS-----------HVGLVEEGLHLYRIMEN 530
V PN VT VL ACS H +V GL ME
Sbjct: 236 -DVEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMET 280
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 121/214 (56%), Gaps = 5/214 (2%)
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
SW+ +I A Q+ + E F LF RM + I+P+ +T V+GAC+ L ++H YI
Sbjct: 8 SWSMMIGAYAQNGRRNEAFLLFERMESEGIRPNAVTCLHVLGACSCQNELPFGKKVHAYI 67
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
+ + +D+ + L+++Y KCG+L ARK+FN +E DV+SWS++I Y Q G EA+
Sbjct: 68 SASEFKWDISLQTSLVNMYAKCGNLEGARKVFNRLERKDVISWSTMISAYNQSGRHSEAI 127
Query: 488 KLFTRMRS-LGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVV 545
+++ M S V PN VT VGV+ AC+ G V G ++ R++ G+ S +V
Sbjct: 128 EIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGRQVHGRLV--SLGLETDVAVGSALV 185
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
L + G + +A+ +++ D++ W +L++
Sbjct: 186 QLYVKCGNLEDAKKAFDRVE-KRDVLCWNFMLSA 218
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
M+ +V SWS +I YAQ G +EA LF RM S G+ PN VT + VL ACS + G
Sbjct: 1 MQQKNVYSWSMMIGAYAQNGRRNEAFLLFERMESEGIRPNAVTCLHVLGACSCQNELPFG 60
Query: 522 --LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H Y I +E+ + + + +V++ A+ G + A N++ D++ W +++++
Sbjct: 61 KKVHAY-ISASEFKWDISLQ--TSLVNMYAKCGNLEGARKVFNRLE-RKDVISWSTMISA 116
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 185/611 (30%), Positives = 290/611 (47%), Gaps = 73/611 (11%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL---LSKCQPDVV 71
Y EA++ N+R T L+ AC L+LGR VH + L + P V
Sbjct: 142 YEEAMLLVR-EMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVA 200
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
++ Y + + + FD M RN+VSW AMI+G A++L++QML
Sbjct: 201 --TALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDE 257
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
V T ++AC+ LGS+ LG+Q+H IK E L NAL+ MY+ + +
Sbjct: 258 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSH 317
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF 251
+F + +D W SMI+A++ G EA+ F M G + +E + S C
Sbjct: 318 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGV-KKDERTVVIMLSMCEEL 376
Query: 252 A------------------RI-----------------------LFNEIDSPDLASWNAL 270
A RI +F+ + D+ SWN +
Sbjct: 377 ASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTM 436
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I +A ++ +A LF MR+ E+ P+ T+ S+L AC L G +H Y++K
Sbjct: 437 ILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSI 496
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+ N P+ A+ MY C A +F E + D +SWN++I
Sbjct: 497 EINQPLRTALADMYMNCGDEATARDLF-EGCPDRDLISWNAMIX---------------- 539
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG--LAFDVFVMNGLMDIYIK 448
+ +P+ +T +V+ + +A+L LH Y+T+ G L D+ + N + +Y +
Sbjct: 540 -----KAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYAR 594
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
CGSL SA +F + +++SW+++I GY G G +A+ F++M G PN VT V V
Sbjct: 595 CGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSV 654
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
L+ACSH G +E GL L+ M ++ + P H SC+VDLLAR GC+ EA +FI+ M +
Sbjct: 655 LSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEP 714
Query: 569 DIVVWKSLLAS 579
D VW++LL+S
Sbjct: 715 DASVWRALLSS 725
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 151/615 (24%), Positives = 285/615 (46%), Gaps = 75/615 (12%)
Query: 11 KQNLYNEALVAYDFSQ-NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
+ NL N+ + ++Q + + +T ++ AC++ +++ G+ +H I + D
Sbjct: 35 QANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDD 94
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
V + +++ Y KCG +EDAR FD M R+VV W AM+ G +A+ L +M +
Sbjct: 95 VRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGR 154
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS---EHGSHLIAQNALIAMYTKFD- 185
+ P T +++ AC G + LGR +H + +++ + H+ ALI Y +FD
Sbjct: 155 ENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHV--ATALIGFYLRFDM 212
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML---------------- 229
R+L +F + +++ SW +MI+ + +G +AL F +ML
Sbjct: 213 RVLPL--LFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQ 270
Query: 230 --------------HHGA----YQPNEFIFGSVFSACSNFARI-----LFNEIDSPDLAS 266
H A + + +I ++ + SN + LF + + D
Sbjct: 271 ACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPL 330
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT-LYQGMQVHSYI 325
WN++I+ A+ EAM LF M+ + D TV +L C + L +G +H+++
Sbjct: 331 WNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHV 390
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
IK G + + NA+L+MY + + + + +F + K D +SWN++I A ++ +
Sbjct: 391 IKSGMRIDASLGNALLSMYTELNCVESVQKIFDRM-KGVDIISWNTMILALARNTLRAQA 449
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
LF RM S+IKP+ T ++ AC + L+ +H Y+ K + + + L D+
Sbjct: 450 CELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADM 509
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y+ CG +AR LF + D++SW+++I PN VT+
Sbjct: 510 YMNCGDEATARDLFEGCPDRDLISWNAMI---------------------XKAEPNSVTI 548
Query: 506 VGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
+ VL++ +H+ + +G LH Y + + + + + + AR G + AE+
Sbjct: 549 INVLSSFTHLATLPQGQSLHAY-VTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKT 607
Query: 564 MACDADIVVWKSLLA 578
+ +I+ W +++A
Sbjct: 608 LP-KRNIISWNAMIA 621
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 235/482 (48%), Gaps = 32/482 (6%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+ AC+ L SL+LG+++H + + D+ + N +LNMY GSLE + F+ +P R+
Sbjct: 269 VQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDA 328
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL-GRQLHA 160
W +MI+ + +A+ L+I+M GV + T ++ C L S L G+ LHA
Sbjct: 329 PLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHA 388
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
HVIKS NAL++MYT+ + + + +F + D+ SW +MI A ++ +
Sbjct: 389 HVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQ 448
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFN-------EIDSPDLASWN 268
A C E + +PN + S+ +AC +F R + EI+ P +
Sbjct: 449 A-CELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALA 507
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELL----------PDGLTVHSLLCACIGRLTLYQG 318
+ + A + LF DR+L+ P+ +T+ ++L + TL QG
Sbjct: 508 DMYMNCGDEATARD---LFEGCPDRDLISWNAMIXKAEPNSVTIINVLSSFTHLATLPQG 564
Query: 319 MQVHSYIIKMGFD--SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+H+Y+ + GF ++ + NA +TMYA+C L +A +FK L K + +SWN++IA
Sbjct: 565 QSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKR-NIISWNAMIAGY 623
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL-HCYITKTGLAFD 435
+ + + FS+ML +P+ +TF V+ AC+ +EM QL H + + +
Sbjct: 624 GMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPE 683
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
+ + ++D+ + G + AR+ + M PD W +L+ + +A +F ++
Sbjct: 684 LVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLD 743
Query: 495 SL 496
L
Sbjct: 744 KL 745
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 217/487 (44%), Gaps = 72/487 (14%)
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
K+ ++ W ++I + + + Y QM GV+P T ++KAC+ +V
Sbjct: 19 KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 78
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+ +H +S G+ L+ DV +++ + K
Sbjct: 79 GKSIH----RSIQGTDLM---------------------------DDVRVGTAVVDFYCK 107
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGV 274
G+ +A C F+ M D+ WNA++ G
Sbjct: 108 CGFVEDARCVFDAM-------------------------------SDRDVVLWNAMVYGY 136
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG-FDSN 333
EAM L EM L P+ T+ +LL AC G L G VH Y ++ G FDSN
Sbjct: 137 VGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSN 196
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
V A++ Y + + LL + +N VSWN++I+ + LF +ML
Sbjct: 197 PHVATALIGFYLRFDMRVLPLLFDLMVVRNI--VSWNAMISGYYDVGDYFKALELFVQML 254
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
++K D +T + ACA++ SL++ Q+H K D++++N L+++Y GSL
Sbjct: 255 VDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLE 314
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
S+ +LF + N D W+S+I YA FGC +EA+ LF RM+S GV + T+V +L+ C
Sbjct: 315 SSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCE 374
Query: 514 HV--GLVE-EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
+ GL++ + LH + I + G+ + ++ + CV + ++M DI
Sbjct: 375 ELASGLLKGKSLHAHVI---KSGMRIDASLGNALLSMYTELNCVESVQKIFDRMK-GVDI 430
Query: 571 VVWKSLL 577
+ W +++
Sbjct: 431 ISWNTMI 437
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 189/419 (45%), Gaps = 25/419 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRS-LQLGRKVHDHI 61
N +S+ + EA+ + + ++ T ++S C L S L G+ +H H+
Sbjct: 332 NSMISAYAAFGCHEEAMDLF-IRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHV 390
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ S + D L N +L+MY + +E + FD+M +++SW MI ++N A
Sbjct: 391 IKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQAC 450
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+L+ +M +S + P +T SI+ AC + + GR +H +V+K + + AL MY
Sbjct: 451 ELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMY 510
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE----LEALCHFNEMLH----HGA 233
AR++F G +D+ SW +MI L + H + H
Sbjct: 511 MNCGDEATARDLFEGCPDRDLISWNAMIXKAEPNSVTIINVLSSFTHLATLPQGQSLHAY 570
Query: 234 YQPNEFIFG----------SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNAN 281
F G ++++ C + A +F + ++ SWNA+IAG + +
Sbjct: 571 VTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGS 630
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAI 340
+AM FS+M + P+G+T S+L AC + G+Q+ HS + + + I
Sbjct: 631 DAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCI 690
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
+ + A+ + A + D+ W +++++C ++ A++ +F ++ +++P
Sbjct: 691 VDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKL--DKLEP 747
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 139/313 (44%), Gaps = 68/313 (21%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+P++Y +++AC + L GR +H +++ + + L+ + +MY CG AR
Sbjct: 461 IKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATAR 520
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F+ P R+++SW AMI P T +++ + + L
Sbjct: 521 DLFEGCPDRDLISWNAMIXKAE---------------------PNSVTIINVLSSFTHLA 559
Query: 151 SVCLGRQLHAHVIKS--EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
++ G+ LHA+V + G L NA I MY + + A N+F + ++++ SW +M
Sbjct: 560 TLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAM 619
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNE----- 258
IA + G +A+ F++ML G ++PN F SV SACS+ I LF+
Sbjct: 620 IAGYGMNGRGSDAMLAFSQMLEDG-FRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDF 678
Query: 259 ----------------------------IDS----PDLASWNALIAGVASHSNANEAMSL 286
IDS PD + W AL++ ++S+A +A ++
Sbjct: 679 NVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTI 738
Query: 287 FSEMRDRELLPDG 299
F ++ E + G
Sbjct: 739 FEKLDKLEPMNAG 751
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 132/273 (48%), Gaps = 5/273 (1%)
Query: 257 NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
+I D WN++I A+ N +S +++M +LP+ T+ +L AC + +
Sbjct: 18 TKIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVE 77
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+G +H I +V V A++ Y KC + +A VF + + D V WN+++
Sbjct: 78 RGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAM-SDRDVVLWNAMVYGY 136
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD- 435
+ EE L M ++P+ T ++ AC + L + +H Y + G+ FD
Sbjct: 137 VGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGM-FDS 195
Query: 436 -VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
V L+ Y++ + LF+ M ++VSW+++I GY G +AL+LF +M
Sbjct: 196 NPHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQML 254
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
V + VT++ + AC+ +G ++ G ++++
Sbjct: 255 VDEVKFDCVTMLVAVQACAELGSLKLGKQIHQL 287
>gi|255545144|ref|XP_002513633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547541|gb|EEF49036.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 187/618 (30%), Positives = 310/618 (50%), Gaps = 51/618 (8%)
Query: 6 VSSLCKQNLYNEALVAYDF---SQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
+S+ K + EAL +DF S N T++ ++ +C +L G+++H +
Sbjct: 92 LSAHIKNERHEEALDIFDFMVLSGPYPN----AFTFSSILRSCFALGDFSYGKRIHASSI 147
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + +L + ++++Y + S EDA F M + VSWT +IA C Q + + A++
Sbjct: 148 KHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIASCVQAGKCSHALR 207
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+Y++ML++ V +FTF ++ A S +G + G+ +HAH I +L+ + AL+ MY+
Sbjct: 208 IYMEMLEAQVSSNEFTFVRLLAASSFIG-LQYGKLIHAHAIVLGVKLNLVLKTALVNMYS 266
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
+ RI DA V DV W ++I+ ++ EA+ F++M G N F +
Sbjct: 267 RCQRIEDAIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVAAFHKMEISGVSASN-FTYL 325
Query: 243 SVFSACSNF----------ARI-------------------------------LFNEIDS 261
S+ S C + +R+ +F I S
Sbjct: 326 SMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEHGLRMFRGIKS 385
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
P++ SW +LIAG A H ++++LF EMR + P+ T+ +L C + YQ +++
Sbjct: 386 PNVISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVLRVCSAIKSPYQTLKL 445
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H +IIK D +V V NA++ YA + +A V K++ + DS+++ S+ Q
Sbjct: 446 HGHIIKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQR-DSITYTSLATRLNQMGY 504
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
E + S M + +K D + A A + +E QLHCY K+GL+ + V NG
Sbjct: 505 HELALSVISHMFNADVKIDGFSLTCFFSASASLGRIETGKQLHCYSLKSGLSCCLSVANG 564
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+D+Y K G + AR+ F + PDVVSW+ LI G A G AL F MR G+ P+
Sbjct: 565 LIDLYGKYGLVHEARRAFTEITEPDVVSWNGLISGLASNGHISSALSAFDDMRLRGIQPD 624
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
+T + VL+ CSH GLV+ GL + M + + P +H C+VD+L RAG + EA + I
Sbjct: 625 SITFLLVLSTCSHGGLVDMGLQYFHSMREMHDVEPQSDHYVCLVDILGRAGRLEEAMNII 684
Query: 562 NQMACDADIVVWKSLLAS 579
M + D ++K+LLA+
Sbjct: 685 ETMPLEPDASIYKTLLAA 702
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 172/595 (28%), Positives = 296/595 (49%), Gaps = 50/595 (8%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
N T + R + + +L+SL+ G +H I+ Q + L N++L++Y KC S+
Sbjct: 11 NKTELLHRLEDVCSKVVSLCNLKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSV 70
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
E AR FD+MP R+VVSWT +++ +N + +A+ ++ M+ SG P FTF SI+++C
Sbjct: 71 EHARQFFDEMPCRDVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSC 130
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
LG G+++HA IK S+ I ++LI +Y++FD DA +FS + D SW
Sbjct: 131 FALGDFSYGKRIHASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWT 190
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEI------- 259
++IA+ + G AL + EML NEF F + +A S+F + + ++
Sbjct: 191 TVIASCVQAGKCSHALRIYMEML-EAQVSSNEFTFVRLLAA-SSFIGLQYGKLIHAHAIV 248
Query: 260 ---------------------------------DSPDLASWNALIAGVASHSNANEAMSL 286
D+ W A+I+G+A + EA++
Sbjct: 249 LGVKLNLVLKTALVNMYSRCQRIEDAIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVAA 308
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
F +M + T S+L CI L+L G Q+HS +I+ G + +VPV NA++ MY K
Sbjct: 309 FHKMEISGVSASNFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMK 368
Query: 347 CS-VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
CS ++ + L +F+ + K+ + +SW S+IA +H ++ LF M ++P+ T +
Sbjct: 369 CSCIVEHGLRMFRGI-KSPNVISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLS 427
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
V+ C+ + S +LH +I KT +DV V N L+D Y G + A ++ M
Sbjct: 428 IVLRVCSAIKSPYQTLKLHGHIIKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQR 487
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LH 523
D ++++SL Q G + AL + + M + V + +L +A + +G +E G LH
Sbjct: 488 DSITYTSLATRLNQMGYHELALSVISHMFNADVKIDGFSLTCFFSASASLGRIETGKQLH 547
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
Y + + G+ + ++DL + G VHEA ++ + D+V W L++
Sbjct: 548 CYSL---KSGLSCCLSVANGLIDLYGKYGLVHEARRAFTEIT-EPDVVSWNGLIS 598
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 153/331 (46%), Gaps = 27/331 (8%)
Query: 22 YDFSQNNTN-------IRIRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
+ F Q++ N + ++P+++ + ++ CS+++S K+H HI+ +K DVV+
Sbjct: 401 HGFQQDSLNLFMEMRTVGVQPNSFTLSIVLRVCSAIKSPYQTLKLHGHIIKTKADYDVVV 460
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
N +++ Y G ++DA M QR+ +++T++ +Q A+ + M + V
Sbjct: 461 GNALVDAYAGSGRVDDAWRVVKDMNQRDSITYTSLATRLNQMGYHELALSVISHMFNADV 520
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
F+ A + LG + G+QLH + +KS L N LI +Y K+ + +AR
Sbjct: 521 KIDGFSLTCFFSASASLGRIETGKQLHCYSLKSGLSCCLSVANGLIDLYGKYGLVHEARR 580
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA 252
F+ I DV SW +I+ + G+ AL F++M G QP+ F V S CS+
Sbjct: 581 AFTEITEPDVVSWNGLISGLASNGHISSALSAFDDMRLRG-IQPDSITFLLVLSTCSHGG 639
Query: 253 RI-----LFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
+ F+ + P + L+ + EAM++ M L PD
Sbjct: 640 LVDMGLQYFHSMREMHDVEPQSDHYVCLVDILGRAGRLEEAMNIIETM---PLEPDASIY 696
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
+LL AC ++++ M + + + G + N
Sbjct: 697 KTLLAAC----SIHRNMNLGEDVARRGLELN 723
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 2/166 (1%)
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ SL+ +H I K GL +++ N L+ +Y KC S+ AR+ F+ M DVVSW+ +
Sbjct: 32 LKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPCRDVVSWTGI 91
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
+ + + +EAL +F M G PN T +L +C +G G ++ ++G
Sbjct: 92 LSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRIH-ASSIKHG 150
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ S ++DL +R +A + M D V W +++AS
Sbjct: 151 FESNQILGSSLIDLYSRFDSTEDACKLFSYMD-SGDTVSWTTVIAS 195
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/479 (33%), Positives = 261/479 (54%), Gaps = 43/479 (8%)
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
++IK + + S +QLHA I+++ SH A + +I++YT + +A VF +
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLVFKTLESP 68
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE-- 258
V +W S+I F+ AL F EM G P+ +F SV +C+ + F E
Sbjct: 69 PVLAWKSVIRCFTDQSLFSRALASFVEMRASGRC-PDHNVFPSVLKSCTMMMDLRFGESV 127
Query: 259 ----------------------------IDS----------PDLASWNALIAGVASHSNA 280
IDS D+ S+N +IAG A
Sbjct: 128 HGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMY 187
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
+A+ + EM +L PD T+ S+L + + +G ++H Y+I+ G DS+V + +++
Sbjct: 188 EDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSL 247
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+ MYAK + + ++ VF L + DS+SWNS++A +Q+ + E RLF +M++++++P
Sbjct: 248 VDMYAKSARIEDSERVFSHLYRR-DSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPG 306
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
+ F+ V+ ACA +A+L + QLH Y+ + G ++F+ + L+D+Y KCG++ +ARK+F+
Sbjct: 307 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFD 366
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
M D VSW+++I+G+A G G EA+ LF M+ GV PN V V VLTACSHVGLV+E
Sbjct: 367 RMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDE 426
Query: 521 GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ M YG+ EH + V DLL RAG + EA DFI++M + VW +LL+S
Sbjct: 427 AWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSS 485
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 197/441 (44%), Gaps = 44/441 (9%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
++++Y L +A + F + V++W ++I + + A+ +++M SG P
Sbjct: 45 VISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPD 104
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
F S++K+C+ + + G +H +++ L NAL+ MY+K I R VF
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFE 164
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL 255
+ RKDV S+ ++IA +++ G +AL EM +P+ F SV S + +L
Sbjct: 165 LMPRKDVVSYNTVIAGYAQSGMYEDALRMVREM-GTSDLKPDAFTLSSVLPIFSEYVDVL 223
Query: 256 ----------------------------------------FNEIDSPDLASWNALIAGVA 275
F+ + D SWN+L+AG
Sbjct: 224 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYV 283
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
+ NEA+ LF +M ++ P + S++ AC TL+ G Q+H Y+++ GF N+
Sbjct: 284 QNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIF 343
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
+ +A++ MY+KC + A +F + + D VSW +II H E LF M
Sbjct: 344 IASALVDMYSKCGNIQAARKIFDRMNLH-DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 402
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGS 454
+KP+ + F V+ AC+ + ++ +TK GL ++ + D+ + G L
Sbjct: 403 GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEE 462
Query: 455 ARKLFNFME-NPDVVSWSSLI 474
A + M P WS+L+
Sbjct: 463 AYDFISKMRVEPTGSVWSTLL 483
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 192/421 (45%), Gaps = 59/421 (14%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPS-------TYAGLISACSSLRSLQLGRKVHDHILLS 64
Q+L++ AL ++ + +R S + ++ +C+ + L+ G VH I+
Sbjct: 83 QSLFSRALASF--------VEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRL 134
Query: 65 KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
D+ N ++NMY K ++ R F+ MP+++VVS+ +IAG +Q+ DA+++
Sbjct: 135 GMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMV 194
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
+M S + P FT S++ S V G+++H +VI+ S + ++L+ MY K
Sbjct: 195 REMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKS 254
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
RI D+ VFS + R+D SW S++A + + G EAL F +M+ +P F SV
Sbjct: 255 ARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMV-SAKVRPGAVAFSSV 313
Query: 245 FSACSNF----------------------------------------ARILFNEIDSPDL 264
AC++ AR +F+ ++ D
Sbjct: 314 IPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDE 373
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC--IGRLTLYQGMQVH 322
SW A+I G A H + +EA+SLF EM+ + + P+ + ++L AC +G + G +
Sbjct: 374 VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGY-FN 432
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
S G + + A+ + + L A ++ W++++++C H
Sbjct: 433 SMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNL 492
Query: 383 E 383
E
Sbjct: 493 E 493
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 161/317 (50%), Gaps = 15/317 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + +Y +AL ++++ T + ++ S + G+++H +++
Sbjct: 175 NTVIAGYAQSGMYEDALRMVR-EMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVI 233
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
DV + + +++MY K +ED+ F + +R+ +SW +++AG QN + N+A++
Sbjct: 234 RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALR 293
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ QM+ + V PG F S+I AC+ L ++ LG+QLH +V++ G ++ +AL+ MY+
Sbjct: 294 LFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYS 353
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I AR +F + D SW ++I + G+ EA+ F EM G +PN+ F
Sbjct: 354 KCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV-KPNQVAFV 412
Query: 243 SVFSACSNFARI-----LFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
+V +ACS+ + FN + + +L + A+ + EA S+MR
Sbjct: 413 AVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMR- 471
Query: 293 RELLPDGLTVHSLLCAC 309
+ P G +LL +C
Sbjct: 472 --VEPTGSVWSTLLSSC 486
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 168/565 (29%), Positives = 285/565 (50%), Gaps = 44/565 (7%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+ AC + +SL+ G+ +H ++ Q D+ L ++N Y C + A+ FD M
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPC 68
Query: 101 VVS-WTAMIAGCSQNYQENDAIKLYIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGRQL 158
+S W ++AG ++NY +A++L+ ++L + P +T+ S+ KAC GL LG+ +
Sbjct: 69 EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMI 128
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H +IK+ ++ ++L+ MY K + A +F+ + KDV W ++I+ + + G
Sbjct: 129 HTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------------ 254
+AL +F M G ++PN + S+C+ +
Sbjct: 189 KDALEYFGLMRRFG-FEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSA 247
Query: 255 ----------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
+F ++ + +WN++I+G + + LF M + + P
Sbjct: 248 LVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPT 307
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
T+ SL+ C L +G VH Y I+ +V V ++++ +Y KC + A +FK
Sbjct: 308 LTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFK 367
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ K + VSWN +I+ + + E LFS M S ++ D ITF V+ AC+++A+LE
Sbjct: 368 LIPK-SKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALE 426
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
++H I + L + VM L+D+Y KCG++ A +F + D+VSW+S+I Y
Sbjct: 427 KGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYG 486
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
G AL+LF M V P+ V + +L+AC H GLV+EG + + M N YGIIP
Sbjct: 487 SHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRV 546
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQ 563
EH SC++DLL RAG +HEA + + Q
Sbjct: 547 EHYSCLIDLLGRAGRLHEAYEILQQ 571
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/506 (27%), Positives = 228/506 (45%), Gaps = 45/506 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ K +Y EAL ++ + ++ TY + AC L LG+ +H ++
Sbjct: 74 NGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLI 133
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D+V+ + ++ MYGKC + E A F++MP+++V W +I+ Q+ DA++
Sbjct: 134 KTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALE 193
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ M + G P T + I +C+ L + G ++H +I S +AL+ MY
Sbjct: 194 YFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYG 253
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + A +F + +K V +W SMI+ + G + + F M + G +P
Sbjct: 254 KCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGV-KPTLTTLS 312
Query: 243 SVFSACSNFARIL----------------------------------------FNEIDSP 262
S+ CS AR+L F I
Sbjct: 313 SLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKS 372
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+ SWN +I+G + EA+ LFSEMR + D +T S+L AC L +G ++H
Sbjct: 373 KVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIH 432
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ II+ D+N V A+L MYAKC + A VFK L K D VSW S+I A H A
Sbjct: 433 NLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKR-DLVSWTSMITAYGSHGHA 491
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNG 441
LF+ ML S +KPD + F ++ AC + E + I G+ V +
Sbjct: 492 YGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSC 551
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDV 467
L+D+ + G L A ++ +NP++
Sbjct: 552 LIDLLGRAGRLHEAYEILQ--QNPEI 575
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 151/292 (51%), Gaps = 13/292 (4%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
N ++ +T + LI CS L G+ VH + + ++ QPDV + + ++++Y KCG +E
Sbjct: 301 NEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVE 360
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
A F +P+ VVSW MI+G + +A+ L+ +M +S V TF S++ ACS
Sbjct: 361 LAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACS 420
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
L ++ G+++H +I+ + ++ + AL+ MY K + +A +VF + ++D+ SW S
Sbjct: 421 QLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTS 480
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS- 261
MI A+ G+ AL F EML +P+ F ++ SAC + + FN++ +
Sbjct: 481 MITAYGSHGHAYGALELFAEMLQSNV-KPDRVAFLAILSACGHAGLVDEGCYYFNQMINV 539
Query: 262 ----PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
P + ++ LI + +EA + + + E+ D + +L AC
Sbjct: 540 YGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQ--NPEIRDDVELLSTLFSAC 589
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 141/290 (48%), Gaps = 10/290 (3%)
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M R+LLP LL AC+ +L QG +H ++ +G +++ +C ++ Y C +
Sbjct: 1 MDTRKLLP-------LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHL 53
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML-ASQIKPDHITFNDVM 408
+A VF + + WN ++A ++ E LF ++L +KPD T+ V
Sbjct: 54 YDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVF 113
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
AC + + +H + KTGL D+ V + L+ +Y KC + A LFN M DV
Sbjct: 114 KACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVA 173
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
W+++I Y Q G +AL+ F MR G PN VT+ +++C+ + + G+ ++ +
Sbjct: 174 CWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEEL 233
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
N G + S +VD+ + G + A + QM +V W S+++
Sbjct: 234 INS-GFLLDSFISSALVDMYGKCGHLEMAIEIFEQMP-KKTVVAWNSMIS 281
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 176/584 (30%), Positives = 291/584 (49%), Gaps = 44/584 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++++ +L+ G+ +H + S+ DV + ++N Y KCGSL DAR FD M
Sbjct: 162 TFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGM 221
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P R+V +W +MI+ S + + +A ++ +M Q G + TF SI+ AC ++ G+
Sbjct: 222 PCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGK 281
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+ + ++ L ALI MY + DA VF + + ++ +W ++I AF+ G
Sbjct: 282 HVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHG 341
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGS--------------------------------- 243
+ EAL +F M G PN F S
Sbjct: 342 HCGEALRYFRMMQQEGIL-PNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMR 400
Query: 244 -----VFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
V+ C + AR +F++++ P+L SWN++I ++A+ LF M+ + +
Sbjct: 401 NALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQ 460
Query: 297 PDGLTVHSLLCAC-IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD + ++L AC IG + + VH + + G + V +++ MYAK L A +
Sbjct: 461 PDRVNFMTILGACTIGSHGRTRKL-VHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEV 519
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+ +E+ + + +WN +I H ++ E + ++ I D +TF V+ AC
Sbjct: 520 ILQEMDEQQIT-AWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSST 578
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
SL +H + GL DV V N L ++Y KCGS+ +AR++F+ M VSW+ ++
Sbjct: 579 SLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQ 638
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
YAQ G +E LKL +M GV N +T V VL++CSH GL+ EG + + ++ GI
Sbjct: 639 AYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIE 698
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH C+VDLL RAG + EAE +I++M + IV W SLL +
Sbjct: 699 VKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGA 742
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/530 (28%), Positives = 251/530 (47%), Gaps = 51/530 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T ++++C S R L+ G VH L + ++ +LNMYGKCG+L DA+ F++M
Sbjct: 60 TLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEM 119
Query: 97 PQRNVVSWTAMIA-----GCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
++NVV+W AM+ GC A++L+ +ML GV TF +++ + +
Sbjct: 120 AEKNVVTWNAMLGVYSLQGCCWKL----AVELFTRMLLEGVKANVITFLNVLNSVVDPDA 175
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ G+ +H+ V +SEH + AL+ YTK + DAR VF G+ + V +W SMI+A
Sbjct: 176 LRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISA 235
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN--------------------- 250
+S EA F M G + + F S+ AC N
Sbjct: 236 YSISERSGEAFFIFQRMQQEGE-RCDRVTFLSILDACVNPETLQHGKHVRESISETSFEL 294
Query: 251 -----------FARI--------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
+AR +F + +L +W+A+I A H + EA+ F M+
Sbjct: 295 DLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQ 354
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+LP+ +T SLL L + ++H I + G D + NA++ +Y +C
Sbjct: 355 QEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPD 414
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A VF +L + + +SWNS+I +Q + ++ +LF M I+PD + F ++GAC
Sbjct: 415 DARTVFDQL-ELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGAC 473
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ +H + ++GL V L+++Y K G L A + M+ + +W+
Sbjct: 474 TIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWN 533
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
LI GYA G EAL+ + +++ + + VT + VL AC+ + EG
Sbjct: 534 VLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEG 583
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 155/544 (28%), Positives = 259/544 (47%), Gaps = 53/544 (9%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MY +CGSL DA F K+ RNVVSW MI+ S +A+ L+ ML GV P T
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
+++ +C + G +HA ++ + + AL+ MY K +LDA++VF +A
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 199 RKDVTSWGSMIAAFS------KLGYELEALCHFNEMLHHG-------------------A 233
K+V +W +M+ +S KL EL F ML G A
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVEL-----FTRMLLEGVKANVITFLNVLNSVVDPDA 175
Query: 234 YQPNEFIFGSV------------------FSACSNF--ARILFNEIDSPDLASWNALIAG 273
+ +FI V ++ C + AR +F+ + + +WN++I+
Sbjct: 176 LRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISA 235
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
+ + EA +F M+ D +T S+L AC+ TL G V I + F+ +
Sbjct: 236 YSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELD 295
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
+ V A++TMYA+C +A VF + K + ++W++II A H E R F M
Sbjct: 296 LFVGTALITMYARCRSPEDAAQVFGRM-KQTNLITWSAIITAFADHGHCGEALRYFRMMQ 354
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
I P+ +TF ++ + LE ++++H IT+ GL + N L+++Y +C S
Sbjct: 355 QEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPD 414
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
AR +F+ +E P+++SW+S+I Y Q D+AL+LF M+ G+ P+ V + +L AC+
Sbjct: 415 DARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT 474
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
+G L E G+ + + +V++ A+AG + AE + +M + I W
Sbjct: 475 -IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMD-EQQITAW 532
Query: 574 KSLL 577
L+
Sbjct: 533 NVLI 536
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 168/385 (43%), Gaps = 50/385 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L++ ++ L+ ++H I ++N ++N+YG+C S +DAR FD++
Sbjct: 364 TFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQL 423
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
N++SW +MI Q + +DA++L+ M Q G+ P + F +I+ AC+ +GS R
Sbjct: 424 ELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT-IGSHGRTR 482
Query: 157 QL-HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+L H V +S G + Q +L+ MY K + A + + + +T+W +I ++
Sbjct: 483 KLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALH 542
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G EAL + + L A ++ F SV +AC++
Sbjct: 543 GRSREALEAYQK-LQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIV 601
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR +F+ + SWN ++ A H + E + L +M +
Sbjct: 602 KNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGV 661
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA----ILTMYAKCSVLC 351
+G+T S+L +C + +G Q Y +G D + V ++ + + L
Sbjct: 662 KLNGITFVSVLSSCSHAGLIAEGCQ---YFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQ 718
Query: 352 NALLVFKELGKNADSVSWNSIIAAC 376
A ++ V+W S++ AC
Sbjct: 719 EAEKYISKMPLEPGIVTWASLLGAC 743
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 105/198 (53%), Gaps = 5/198 (2%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
EAL AY Q I + T+ +++AC+S SL G+ +H + + DV+++N +
Sbjct: 547 EALEAYQKLQLEA-IPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNAL 605
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
NMY KCGS+E+AR FD MP R+ VSW M+ +Q+ + + +KL +M Q GV
Sbjct: 606 TNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNG 665
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILDARNVF 194
TF S++ +CS G + G Q + H + + G + ++ L+ + + ++ +A
Sbjct: 666 ITFVSVLSSCSHAGLIAEGCQ-YFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYI 724
Query: 195 SGIA-RKDVTSWGSMIAA 211
S + + +W S++ A
Sbjct: 725 SKMPLEPGIVTWASLLGA 742
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/530 (31%), Positives = 277/530 (52%), Gaps = 30/530 (5%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
+Y L D+ F+ + ++W ++I + + + ++ +I ML SG+ P
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD-------RILDAR 191
F S++KAC+ L + LG LH ++I+ L NAL+ MY+K + L A
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170
Query: 192 NVFSGIARKD---------VTSWGSMIAAFSKLGYELEALCH-FNEMLHHGAYQPN---- 237
V + + V + G ++ Y++ F + Y+P
Sbjct: 171 QVLDEMTERTRSVRTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYR 230
Query: 238 --------EFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
+ I S + R +F + DL SWN +IAG A + E +++ E
Sbjct: 231 EMEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVRE 290
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M L PD T+ S+L + + +G ++H I+ G D+ V V ++++ MYAKC+
Sbjct: 291 MGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTR 350
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ ++ VF L + D +SWNSIIA C+Q+ +E + F +ML ++IKP +F+ +M
Sbjct: 351 VVDSYRVFTLLTER-DGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMP 409
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
ACA + +L + QLH YIT+ G ++F+ + L+D+Y KCG++ +AR++F+ M D+VS
Sbjct: 410 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVS 469
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+++I+G A G +A++LF +M++ G+ PN V + VLTACSH GLV+E + M
Sbjct: 470 WTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMT 529
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++GI P EH + V DLL RAG + EA DFI M VW +LL++
Sbjct: 530 LDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSA 579
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 131/248 (52%), Gaps = 2/248 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + LY E L N++ T + ++ + + G+++H +
Sbjct: 269 NTIIAGNARNGLYGETLTMVR-EMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSI 327
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+V + + +++MY KC + D+ F + +R+ +SW ++IAGC QN ++ +K
Sbjct: 328 RQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLK 387
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ QML + + P ++F SI+ AC+ L ++ LG+QLH ++ ++ ++ ++L+ MY
Sbjct: 388 FFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYA 447
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I AR +F + +D+ SW +MI + G+ L+A+ F +M G +PN F
Sbjct: 448 KCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEG-IEPNYVAFM 506
Query: 243 SVFSACSN 250
+V +ACS+
Sbjct: 507 AVLTACSH 514
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 154/355 (43%), Gaps = 42/355 (11%)
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
S++ R F+ MP++++VSW +IAG ++N + + + +M + + P FT S++
Sbjct: 249 SVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLP 308
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
+ + G+++H I+ + + ++LI MY K R++D+ VF+ + +D S
Sbjct: 309 LIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGIS 368
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------- 251
W S+IA + G E L F +ML +P + F S+ AC++
Sbjct: 369 WNSIIAGCVQNGLFDEGLKFFRQML-MAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYI 427
Query: 252 ---------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
AR +F+ + D+ SW A+I G A H +A +A+
Sbjct: 428 TRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAI 487
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTM 343
LF +M+ + P+ + ++L AC + + + +S + G V A+ +
Sbjct: 488 ELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDL 547
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
+ L A + W ++++AC H + ++ +R+L K
Sbjct: 548 LGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPK 602
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 88/146 (60%), Gaps = 6/146 (4%)
Query: 10 CKQN-LYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKC 66
C QN L++E L F + +I+P +Y+ ++ AC+ L +L LG+++H +I +
Sbjct: 376 CVQNGLFDEGL---KFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGF 432
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
++ + + +++MY KCG++ AR FD+M R++VSWTAMI GC+ + DAI+L+ Q
Sbjct: 433 DENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQ 492
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSV 152
M G+ P F +++ ACS G V
Sbjct: 493 MKTEGIEPNYVAFMAVLTACSHAGLV 518
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 10/183 (5%)
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
V+SLL + + Q Q+H+ ++K S + +L++Y+ ++L ++L +F L
Sbjct: 11 VNSLLRNPLSIKSRSQAQQLHAQVLKFQASSLC-NLSLLLSIYSHINLLHDSLRLFNTL- 68
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
+++W S+I H + F MLAS + PDH F V+ ACA + L +
Sbjct: 69 HFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGE 128
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKC--------GSLGSARKLFNFMENPDVVSWSSL 473
LH YI + GL FD++ N LM++Y K LG+++ L E V +S+
Sbjct: 129 SLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASV 188
Query: 474 ILG 476
++G
Sbjct: 189 LVG 191
>gi|302787038|ref|XP_002975289.1| hypothetical protein SELMODRAFT_10002 [Selaginella moellendorffii]
gi|300156863|gb|EFJ23490.1| hypothetical protein SELMODRAFT_10002 [Selaginella moellendorffii]
Length = 730
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 169/625 (27%), Positives = 294/625 (47%), Gaps = 83/625 (13%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP+ T+ + ACSS L+ G+K+H I+ + + ++ L N +++MY CGSL DA+
Sbjct: 75 VRPNCVTFINTLGACSSAEFLETGKKIHAQIVAGEVELELNLANSLISMYSNCGSLVDAK 134
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD M +RNVVSW +IA S + +A+ L+ +M + G P + +F S+ ACS L
Sbjct: 135 RFFDGMNRRNVVSWNCIIAAFSGHGHYREAVDLFYEMEKQGFKPDRVSFVSVFSACSILE 194
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ GR++HA + N L+ MY + + DAR VF I +++ SW SMIA
Sbjct: 195 DLSQGRRIHARFCDGRMKLDVSIGNTLLNMYARCGSLDDARLVFDSITSRNIVSWTSMIA 254
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------- 251
A+++ +A F +M PNE F ++ AC+
Sbjct: 255 AYAQFDRFHDAYEVFQKM----GVAPNEVTFITILGACAEARALKQAREIHSLVLTSGIL 310
Query: 252 -----------------------ARILFNEIDSPD--LASWNALIAGVASHSNANEAMSL 286
A+ +F + + + + +W ++IA + EA++L
Sbjct: 311 EKQQLTVGNGLINTYAKCGSLSDAKTVFESMATAERNVVTWTSIIAACGLCGHPREALAL 370
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
F M + + +T ++L AC + + +H I+ G+D + VCN ++ M+ K
Sbjct: 371 FHRMELEGIPANEITFGTVLSACADLGSTREARYLHGLIVSGGYDRDTVVCNGLINMFGK 430
Query: 347 CSVLCNALLVFKELGKN---------------------------------ADSVSWNSII 373
C +L +A +F+ + D ++W +++
Sbjct: 431 CGMLEDARAIFERMRSRNLVTWTGMLGAYIQQQEIRQAVSLFQQMERISYKDVMAWTTMV 490
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
AA Q A+E +L++RM + PD ITF +++ AC++M + + + +I + GL
Sbjct: 491 AAYAQAGYADEALKLYARMGLEGVAPDEITFVNLLHACSRMGAKKEGWTIRSHILERGLP 550
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
+ NGL+ Y CG+ A+ +F + D +W++ I Q G DE+L+LF RM
Sbjct: 551 SSRVLGNGLVCFYGACGTWLQAKMVFENLAERDSAAWNAAIGVSGQHGFYDESLRLFERM 610
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
G+ P+ +T VL +CSH G +E + +M ++G+ P EH C+ DL R G
Sbjct: 611 VLEGMEPDEITFTNVLFSCSHSGEIERAWRWFLVMRGDHGMEPNVEHWGCLADLFGRLGW 670
Query: 554 VHEAEDFINQMACDADIVVWKSLLA 578
+ EAE ++ + + W +LL+
Sbjct: 671 IDEAERLVSFLPRTRASIAWTTLLS 695
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 170/544 (31%), Positives = 264/544 (48%), Gaps = 84/544 (15%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
R++H + + + +L N ++ MYGKCG+L +AR FD + ++NV SW+ +I S++
Sbjct: 1 RRIHSELARTGIDSETLLGNTLVQMYGKCGNLAEARAAFDGIAEKNVFSWSIIIGLYSRH 60
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
+AI+L+ M V P TF + + ACS + G+++HA ++ E L
Sbjct: 61 RLSREAIELFHAM---DVRPNCVTFINTLGACSSAEFLETGKKIHAQIVAGEVELELNLA 117
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
N+LI+MY+ ++DA+ F G+ R++V SW +IAAFS G+ EA+ F EM G +
Sbjct: 118 NSLISMYSNCGSLVDAKRFFDGMNRRNVVSWNCIIAAFSGHGHYREAVDLFYEMEKQG-F 176
Query: 235 QPNEFIFGSVFSACS----------------------------------------NFARI 254
+P+ F SVFSACS + AR+
Sbjct: 177 KPDRVSFVSVFSACSILEDLSQGRRIHARFCDGRMKLDVSIGNTLLNMYARCGSLDDARL 236
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+F+ I S ++ SW ++IA A ++A +F +M + P+ +T ++L AC
Sbjct: 237 VFDSITSRNIVSWTSMIAAYAQFDRFHDAYEVFQKM---GVAPNEVTFITILGACAEARA 293
Query: 315 LYQGMQVHSYIIKMGF--DSNVPVCNAILTMYAKCSVLCNALLVFKELGK-NADSVSWNS 371
L Q ++HS ++ G + V N ++ YAKC L +A VF+ + + V+W S
Sbjct: 294 LKQAREIHSLVLTSGILEKQQLTVGNGLINTYAKCGSLSDAKTVFESMATAERNVVTWTS 353
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
IIAAC E LF RM I + ITF V+ ACA + S LH I G
Sbjct: 354 IIAACGLCGHPREALALFHRMELEGIPANEITFGTVLSACADLGSTREARYLHGLIVSGG 413
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN--------------------------- 464
D V NGL++++ KCG L AR +F M +
Sbjct: 414 YDRDTVVCNGLINMFGKCGMLEDARAIFERMRSRNLVTWTGMLGAYIQQQEIRQAVSLFQ 473
Query: 465 -------PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
DV++W++++ YAQ G DEALKL+ RM GV+P+ +T V +L ACS +G
Sbjct: 474 QMERISYKDVMAWTTMVAAYAQAGYADEALKLYARMGLEGVAPDEITFVNLLHACSRMGA 533
Query: 518 VEEG 521
+EG
Sbjct: 534 KKEG 537
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 179/341 (52%), Gaps = 13/341 (3%)
Query: 244 VFSACSNFA--RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
++ C N A R F+ I ++ SW+ +I + H + EA+ LF M R P+ +T
Sbjct: 25 MYGKCGNLAEARAAFDGIAEKNVFSWSIIIGLYSRHRLSREAIELFHAMDVR---PNCVT 81
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
+ L AC L G ++H+ I+ + + + N++++MY+ C L +A F +
Sbjct: 82 FINTLGACSSAEFLETGKKIHAQIVAGEVELELNLANSLISMYSNCGSLVDAKRFFDGMN 141
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
+ + VSWN IIAA H E LF M KPD ++F V AC+ + L
Sbjct: 142 RR-NVVSWNCIIAAFSGHGHYREAVDLFYEMEKQGFKPDRVSFVSVFSACSILEDLSQGR 200
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
++H + DV + N L+++Y +CGSL AR +F+ + + ++VSW+S+I YAQF
Sbjct: 201 RIHARFCDGRMKLDVSIGNTLLNMYARCGSLDDARLVFDSITSRNIVSWTSMIAAYAQFD 260
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC 541
+A ++F +M GV+PN VT + +L AC+ +++ ++ ++ GI+ ++
Sbjct: 261 RFHDAYEVFQKM---GVAPNEVTFITILGACAEARALKQAREIHSLVLTS-GILEKQQLT 316
Query: 542 --SCVVDLLARAGCVHEAEDFINQMA-CDADIVVWKSLLAS 579
+ +++ A+ G + +A+ MA + ++V W S++A+
Sbjct: 317 VGNGLINTYAKCGSLSDAKTVFESMATAERNVVTWTSIIAA 357
>gi|356507622|ref|XP_003522563.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Glycine max]
Length = 698
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 174/613 (28%), Positives = 285/613 (46%), Gaps = 72/613 (11%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S YA CSS R++ RKV H+L P L N + Y KC L DAR FD+
Sbjct: 63 SLYALFFRLCSSHRAVVEARKVESHLLTFSPNPPTFLLNRAIEAYAKCHCLRDARELFDE 122
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MPQ + SW A+I SQ N+ L++ M +SG P + TF S++ +C+ + L
Sbjct: 123 MPQPDGGSWNALITAYSQLGFPNETFSLFLCMTRSGFFPTEVTFASVLASCAASSELLLS 182
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+Q+H V K ++I ++L+ +Y K + DAR +F I + + +W ++ +
Sbjct: 183 KQVHGLVTKFGFCGNVILGSSLVDVYGKCGVMADARRMFHEIPQPNAVTWNVIVRRYLDA 242
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------------------- 254
G EA+ F+ M A +P F F + ACS+ + +
Sbjct: 243 GDAKEAVFMFSRMFSTSAVRPMNFTFSNALVACSSVSALREGVQIHGVVVKLGLREDNVV 302
Query: 255 -------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+F+++ DL W ++++G A EA F EM +R +
Sbjct: 303 SSSLVNMYVKCGRLEDGFQVFDQLGFRDLVCWTSIVSGYAMSGKTLEAREFFDEMPERNV 362
Query: 296 LP-------------------------------DGLTVHSLLCACIGRLTLYQGMQVHSY 324
+ D +T+ LL G G QVH Y
Sbjct: 363 ISWNAMLAGYTQCSEWSKALDFVYLMLDVIKDVDHVTLGLLLNVSAGISDHEMGKQVHGY 422
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
I + GF S++ + NA+L MY KC L + + F ++ D VSWN+++A+ QH +E+
Sbjct: 423 IYRHGFHSDLRLSNALLDMYGKCGNLNSTRVWFNQMSDRRDRVSWNALLASYGQHQLSEQ 482
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
+FS+M + KP TF ++ ACA +L + Q+H ++ + G D L+
Sbjct: 483 ALTMFSKM-QWETKPTQYTFVTLLLACANTFTLCLGKQIHGFMIRHGFHIDTVTRTALVY 541
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y KC L A ++ + DV+ W+++I+G G EAL+LF M + G+ P+ VT
Sbjct: 542 MYCKCRCLEYAIEVLKRAVSRDVIIWNTIIMGCVHNHKGKEALELFVIMEAEGIKPDHVT 601
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
G+L AC GLVE G ++ M +E+ ++P EH C+++L +R + E E+F+ M
Sbjct: 602 FKGILLACIEEGLVEFGTGCFKSMSSEFHVLPRMEHYDCMIELYSRHRYMDELENFMRTM 661
Query: 565 ACDADIVVWKSLL 577
+ + + K +L
Sbjct: 662 TMEPTLPMLKRVL 674
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 134/479 (27%), Positives = 214/479 (44%), Gaps = 50/479 (10%)
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI---AMYTKFDRILDARNVFSGIAR 199
+ A S L + + L H H A NA+I Y K RI A ++ +
Sbjct: 3 VSAASILNQLLRKQNLKPH----PHSQTQPATNAVINTILTYLKAGRIRKATSILFAFPK 58
Query: 200 KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG-AYQPNE--FIFGSVFSA-----CSNF 251
S + A F +L A+ ++ H + PN F+ A C
Sbjct: 59 PFPFS---LYALFFRLCSSHRAVVEARKVESHLLTFSPNPPTFLLNRAIEAYAKCHCLRD 115
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR LF+E+ PD SWNALI + NE SLF M P +T S+L +C
Sbjct: 116 ARELFDEMPQPDGGSWNALITAYSQLGFPNETFSLFLCMTRSGFFPTEVTFASVLASCAA 175
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
L QVH + K GF NV + ++++ +Y KC V+ +A +F E+ + ++V+WN
Sbjct: 176 SSELLLSKQVHGLVTKFGFCGNVILGSSLVDVYGKCGVMADARRMFHEIPQ-PNAVTWNV 234
Query: 372 IIAACLQHNQAEELFRLFSRMLA-SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
I+ L A+E +FSRM + S ++P + TF++ + AC+ +++L Q+H + K
Sbjct: 235 IVRRYLDAGDAKEAVFMFSRMFSTSAVRPMNFTFSNALVACSSVSALREGVQIHGVVVKL 294
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
GL D V + L+++Y+KCG L ++F+ + D+V W+S++ GYA G EA + F
Sbjct: 295 GLREDNVVSSSLVNMYVKCGRLEDGFQVFDQLGFRDLVCWTSIVSGYAMSGKTLEAREFF 354
Query: 491 TRMRSLGVSPNLVTLVG-------------------VLTACSHVGL-----VEEGLHLYR 526
M V L G V+ HV L V G+ +
Sbjct: 355 DEMPERNVISWNAMLAGYTQCSEWSKALDFVYLMLDVIKDVDHVTLGLLLNVSAGISDHE 414
Query: 527 IMENEYGIIPTREHCS------CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + +G I S ++D+ + G ++ + NQM+ D V W +LLAS
Sbjct: 415 MGKQVHGYIYRHGFHSDLRLSNALLDMYGKCGNLNSTRVWFNQMSDRRDRVSWNALLAS 473
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 157/361 (43%), Gaps = 76/361 (21%)
Query: 24 FSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYG 81
FS+ + +RP T++ + ACSS+ +L+ G ++H ++ + D V+ + ++NMY
Sbjct: 252 FSRMFSTSAVRPMNFTFSNALVACSSVSALREGVQIHGVVVKLGLREDNVVSSSLVNMYV 311
Query: 82 KCGSLED-------------------------------ARMGFDKMPQRNVVSWTAMIAG 110
KCG LED AR FD+MP+RNV+SW AM+AG
Sbjct: 312 KCGRLEDGFQVFDQLGFRDLVCWTSIVSGYAMSGKTLEAREFFDEMPERNVISWNAMLAG 371
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
+Q + + A+ ML T G ++ +G+ +G+Q+H ++ + S
Sbjct: 372 YTQCSEWSKALDFVYLMLDVIKDVDHVTLGLLLNVSAGISDHEMGKQVHGYIYRHGFHSD 431
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
L NAL+ MY K + R F+ ++ R+D SW +++A++ + +AL F++M
Sbjct: 432 LRLSNALLDMYGKCGNLNSTRVWFNQMSDRRDRVSWNALLASYGQHQLSEQALTMFSKM- 490
Query: 230 HHGAYQPNEFIFGSVFSACSN--------------------------------------- 250
+P ++ F ++ AC+N
Sbjct: 491 -QWETKPTQYTFVTLLLACANTFTLCLGKQIHGFMIRHGFHIDTVTRTALVYMYCKCRCL 549
Query: 251 -FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+A + S D+ WN +I G + EA+ LF M + PD +T +L AC
Sbjct: 550 EYAIEVLKRAVSRDVIIWNTIIMGCVHNHKGKEALELFVIMEAEGIKPDHVTFKGILLAC 609
Query: 310 I 310
I
Sbjct: 610 I 610
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 2/153 (1%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++S + L +AL FS+ + T+ L+ AC++ +L LG+++H ++
Sbjct: 468 NALLASYGQHQLSEQALTM--FSKMQWETKPTQYTFVTLLLACANTFTLCLGKQIHGFMI 525
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
D V + ++ MY KC LE A + R+V+ W +I GC N++ +A++
Sbjct: 526 RHGFHIDTVTRTALVYMYCKCRCLEYAIEVLKRAVSRDVIIWNTIIMGCVHNHKGKEALE 585
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
L++ M G+ P TF I+ AC G V G
Sbjct: 586 LFVIMEAEGIKPDHVTFKGILLACIEEGLVEFG 618
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 169/527 (32%), Positives = 260/527 (49%), Gaps = 47/527 (8%)
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+R++ +W MI + N + +Y M SGV T+ ++KAC+ L S+ G
Sbjct: 8 RRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTM 67
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
LH HV+K + Q AL+ MY+K + AR VF + ++ V SW +M++A+S+
Sbjct: 68 LHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSS 127
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------- 251
+AL EM G ++P F S+ S SN
Sbjct: 128 MDQALSLLKEMWVLG-FEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEV 186
Query: 252 ------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
AR +F+ +D + SW +I G +A EA LF +M+ +
Sbjct: 187 SLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQ 246
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ D + +L+ CI L VHS ++K G + PV N ++TMYAKC L +A
Sbjct: 247 SVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSA 306
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
+F +L +SW S+IA + E LF RM+ + I+P+ T V+ ACA
Sbjct: 307 RRIF-DLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACAD 365
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ SL + ++ YI GL D V L+ +Y KCGS+ AR++F + + D+ W+S+
Sbjct: 366 LGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSM 425
Query: 474 ILGYAQFGCGDEALKLFTRMRSL-GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
I YA G G+EA+ LF +M + G+ P+ + V ACSH GLVEEGL ++ M+ ++
Sbjct: 426 INSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDF 485
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
GI PT EHC+C++DLL R G + A + I M D VW LL++
Sbjct: 486 GITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSA 532
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 142/485 (29%), Positives = 228/485 (47%), Gaps = 49/485 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY L+ AC++L S+Q G +H H+L Q D +Q +++MY KC + AR FD+M
Sbjct: 48 TYPLLLKACANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEM 107
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV---C 153
PQR+VVSW AM++ S+ + A+ L +M G P TF SI+ S L S
Sbjct: 108 PQRSVVSWNAMVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHL 167
Query: 154 LGRQLHAHVIKSEHGSHLIA-QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
LG+ +H +IK ++ N+L+ MY +F + +AR VF + K + SW +MI +
Sbjct: 168 LGKSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGY 227
Query: 213 SKLGYELEALCHFNEMLHH--------------GAYQ----------------------- 235
K+G+ +EA F +M H G Q
Sbjct: 228 VKIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKD 287
Query: 236 PNEFIFGSVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
P E + ++++ C N AR +F+ I + SW ++IAG + EA+ LF M
Sbjct: 288 PVENLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRT 347
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
++ P+G T+ +++ AC +L G ++ YI G +S+ V +++ MY+KC + A
Sbjct: 348 DIRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKA 407
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ-IKPDHITFNDVMGACA 412
VF+ + + D W S+I + H E LF +M ++ I PD I + V AC+
Sbjct: 408 REVFERV-TDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACS 466
Query: 413 KMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS-- 469
+E + + K G+ V L+D+ + G L A M PDV +
Sbjct: 467 HSGLVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMP-PDVQAQV 525
Query: 470 WSSLI 474
W L+
Sbjct: 526 WGPLL 530
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 126/227 (55%)
Query: 24 FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
+ + ++ I + LIS C +R L L VH +L C ++N ++ MY KC
Sbjct: 241 YQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKC 300
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G+L AR FD + +++++SWT+MIAG +A+ L+ +M+++ + P T +++
Sbjct: 301 GNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVV 360
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
AC+ LGS+ +G+++ ++ + S Q +LI MY+K I+ AR VF + KD+T
Sbjct: 361 SACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLT 420
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
W SMI +++ G EA+ F++M P+ ++ SVF ACS+
Sbjct: 421 VWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSH 467
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 171/394 (43%), Gaps = 47/394 (11%)
Query: 36 STYAGLISACSSLRSLQ---LGRKVHDHIL-LSKCQPDVVLQNHILNMYGKCGSLEDARM 91
ST+ ++S S+L S + LG+ +H ++ L +V L N ++ MY + +++AR
Sbjct: 148 STFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEARK 207
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD M +++++SWT MI G + +A L+ QM V F ++I C +
Sbjct: 208 VFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRD 267
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ L +H+ V+K +N LI MY K + AR +F I K + SW SMIA
Sbjct: 268 LLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAG 327
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
+ LG+ EAL F M+ +PN +V SAC++
Sbjct: 328 YVHLGHPGEALDLFRRMIRTDI-RPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLES 386
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
AR +F + DL W ++I A H NEA+SLF +M
Sbjct: 387 DQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMT 446
Query: 292 DRE-LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSV 349
E ++PD + S+ AC + +G++ + K G V C ++ + +
Sbjct: 447 TAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQ 506
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L AL + + + + W +++AC H E
Sbjct: 507 LDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVE 540
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 183/591 (30%), Positives = 281/591 (47%), Gaps = 67/591 (11%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
+ L RK+ D + DV N +L Y +E+AR F++MP+RN VSWT MI+G
Sbjct: 142 ITLARKLFDAM----PSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISG 197
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
Q A ++ ML G+ P Q S++ A LG + +H V K+
Sbjct: 198 YVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERD 257
Query: 171 LIAQNALIAMYTKFDRILD-ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
++ A++ YTK +LD A F G+A ++ +W ++IAA S+ G +A +
Sbjct: 258 VVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDP 317
Query: 230 HHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
+ G + A+ILF++I P++ SWNA+I G + +EA LF+
Sbjct: 318 LKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNR 377
Query: 290 MRDRELLP----------DGLTVHSLLC---------------------ACIGRLTLYQG 318
M R + +G + +L+ AC L G
Sbjct: 378 MPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETG 437
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG----------------- 361
QVHS +K G N VCNA++T+Y K + + +F +
Sbjct: 438 KQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQN 497
Query: 362 -------------KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ D VSW +II+AC Q +Q E +F ML + P+ ++
Sbjct: 498 NLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILL 557
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
G + + ++ Q+H K G+ + V N L+ +Y KC S S K+F+ ME D+
Sbjct: 558 GLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSADSL-KVFDSMEERDIF 616
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
+W+++I GYAQ G G EA++++ M S GV PN VT VG+L ACSH GLV+EG ++ M
Sbjct: 617 TWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSM 676
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++YG+ P EH +C+VDLL RAG V AE FI M + D V+W +LL +
Sbjct: 677 SSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGA 727
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 193/470 (41%), Gaps = 67/470 (14%)
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
P Q+ + G+ G L +AR FD MP R++++W +MI N
Sbjct: 31 PGTSAQSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNN------------- 77
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
G GR L + G +L L++ Y + R+
Sbjct: 78 ----------------------GMPDAGRSLADAI----SGGNLRTGTILLSGYARAGRV 111
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
DAR VF G+ ++ +W +M+ + + G A F+ M N + G S
Sbjct: 112 RDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQ 171
Query: 248 CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC 307
AR LF + + SW +I+G A +F M + P+ + S+L
Sbjct: 172 LMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLS 231
Query: 308 AC--IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
A +G+ + + +H + K GF+ +V V AIL Y K + ++ + F E +
Sbjct: 232 AVRHLGKPGILE--SIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARN 289
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
+W++IIAA Q + ++ F ++ R D + + S M+T L
Sbjct: 290 EYTWSTIIAALSQAGRIDDAFAVYQR--------------DPLKSVPSRTS--MLTGLAR 333
Query: 426 Y--ITKTGLAFD------VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
Y I + FD V N ++ Y++ + A LFN M + +SW+ +I GY
Sbjct: 334 YGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGY 393
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
A+ G ++AL + G+ P+L +L ACS++ +E G ++ +
Sbjct: 394 ARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSL 443
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 177/412 (42%), Gaps = 60/412 (14%)
Query: 44 ACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL----------------- 86
ACS++ +L+ G++VH + + CQ + + N ++ +YGK S+
Sbjct: 427 ACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVS 486
Query: 87 --------------EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
++AR F+ MP +VVSWT +I+ C+Q Q N+A++++ ML
Sbjct: 487 YNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERE 546
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
+P ++ LG+ LG+Q+H IK S L+ NAL++MY K D+
Sbjct: 547 LPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSA-DSLK 605
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA 252
VF + +D+ +W ++I +++ G EA+ + M+ G PNE F + ACS+
Sbjct: 606 VFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVL-PNEVTFVGLLHACSHSG 664
Query: 253 RI-----LFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
+ F + S P L + ++ + + A +M + PD +
Sbjct: 665 LVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDM---PIEPDSVIW 721
Query: 303 HSLLCACIGRLTLYQGMQVHS--YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
+LL AC + G + + I+ N + + I + + + KE
Sbjct: 722 SALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKER 781
Query: 361 GKNADS-VSW-------NSIIAACLQHNQAEE----LFRLFSRMLASQIKPD 400
G N D SW +S + +H Q + L+ L++ + A+ PD
Sbjct: 782 GVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPD 833
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 179/559 (32%), Positives = 287/559 (51%), Gaps = 43/559 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ + AC++L SL LG +H + S +V + N +++MYGKCG+L A FD +
Sbjct: 261 TFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDL 320
Query: 97 PQRNV---VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM-PGQFTFGSIIKACSGLGSV 152
R + VSW ++++ N A+ L+ +M +M P + +I+ AC+ L +
Sbjct: 321 CHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAAS 380
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
GRQ+H I+S + NA++ MY K ++ +A VF + KDV SW +M+ +
Sbjct: 381 LRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGY 440
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
S+ G AL F M E D+ +W A+I
Sbjct: 441 SQAGRLEHALSLFERMT---------------------------EENIELDVVTWTAVIT 473
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A EA+ +F +M D P+ +T+ SLL AC+ L G + H Y IK +
Sbjct: 474 GYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNL 533
Query: 333 NVP--------VCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQHNQAE 383
+ P V N ++ MYAKC A +F + K+ D V+W +I QH A
Sbjct: 534 DGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDAN 593
Query: 384 ELFRLFSRM--LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL-AFDVFVMN 440
+LFS M + IKP+ T + + ACA++A+L Q+H Y+ + + +FV N
Sbjct: 594 NALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVAN 653
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+D+Y K G + +A+ +F+ M + VSW+SL+ GY G G++AL++F MR + + P
Sbjct: 654 CLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVP 713
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ +T + VL ACSH G+V+ G++ + M ++G+ P EH +C+VDL RAG + EA
Sbjct: 714 DGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKL 773
Query: 561 INQMACDADIVVWKSLLAS 579
IN+M + VVW +LL++
Sbjct: 774 INEMPMEPTPVVWVALLSA 792
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 179/431 (41%), Gaps = 88/431 (20%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++ AC+SL + GR+VH + S DV + N +++MY KCG +E+A F +M ++
Sbjct: 370 ILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKD 429
Query: 101 VVSWTAMIAGCSQN-------------YQEN----------------------DAIKLYI 125
VVSW AM+ G SQ +EN +A+ ++
Sbjct: 430 VVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFR 489
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK--------SEHGSHLIAQNAL 177
QM G P T S++ AC +G++ G++ H + IK L N L
Sbjct: 490 QMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGL 549
Query: 178 IAMYTKFDRILDARNVFSGIARKD--VTSWGSMIAAFSKLGYELEALCHFNEMLH-HGAY 234
I MY K AR +F ++ KD V +W MI +++ G AL F+ M +
Sbjct: 550 IDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSI 609
Query: 235 QPNEFIFGSVFSACS-----------------NF------------------------AR 253
+PN+F AC+ NF A+
Sbjct: 610 KPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQ 669
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
I+F+ + + SW +L+ G H +A+ +F EMR L+PDG+T +L AC
Sbjct: 670 IVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSG 729
Query: 314 TLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
+ G+ + + K G D ++ ++ + L A+ + E+ V W ++
Sbjct: 730 MVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVAL 789
Query: 373 IAACLQHNQAE 383
++AC H+ E
Sbjct: 790 LSACRLHSNVE 800
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 125/233 (53%), Gaps = 11/233 (4%)
Query: 353 ALLVFKELGKNADSV-SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A+L+ + L + SV WN +I L ++F L+ +M + PDH TF V AC
Sbjct: 210 AILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKAC 269
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN---PDVV 468
A ++SL + LH ++++G A +VFV N ++ +Y KCG+L A +F+ + + D+V
Sbjct: 270 ANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLV 329
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGV-SPNLVTLVGVLTACSHVGLVEEG--LHLY 525
SW+S++ Y + AL LF +M + + SP++++LV +L AC+ + G +H +
Sbjct: 330 SWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGF 389
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
I G++ + VVD+ A+ G + EA +M D+V W +++
Sbjct: 390 SIRS---GLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFK-DVVSWNAMVT 438
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 111/230 (48%), Gaps = 37/230 (16%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV-LQNHILNMYGKCGSLEDA 89
I+P+ T + + AC+ L +L+ GR+VH ++L + ++ + N +++MY K G ++ A
Sbjct: 609 IKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTA 668
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
++ FD MPQRN VSWT+++ G + + DA++++ +M + ++P TF ++ ACS
Sbjct: 669 QIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHS 728
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G V +HG + F+R+ V G + M+
Sbjct: 729 GMV-------------DHGINF------------FNRMSKDFGVDPGPEH-----YACMV 758
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEI 259
+ + G EA+ NEM +P ++ ++ SAC + + E
Sbjct: 759 DLWGRAGRLGEAMKLINEM----PMEPTPVVWVALLSACRLHSNVELGEF 804
>gi|225454898|ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Vitis vinifera]
Length = 744
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 179/576 (31%), Positives = 291/576 (50%), Gaps = 30/576 (5%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKC---QPDVVLQNH 75
A DF Q P+ T ++++C+ L + GR +H L+SK + +
Sbjct: 117 ALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHG--LVSKLGLFSGSSAVGSS 174
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ---SGV 132
+ MY KCG LE+A FD++ R+VV+WTA++ GC QN + ++ +M + G
Sbjct: 175 FVYMYSKCGVLEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHRIGGDGE 234
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
P T +AC LG++ GR LH V+K+ + Q+ L++MY+K +A
Sbjct: 235 RPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEAHR 294
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA 252
F + KD+ SW SMI+A+S++G+ E + F EML G Y P+ + + S+ SN
Sbjct: 295 SFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIY-PDGIVISCMLSSFSNSM 353
Query: 253 RI---------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
R+ + + D NAL++ A F + ++ L V
Sbjct: 354 RVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVS 413
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
+ R +H Y+IK D NV V N+++ MY K L A +F + +
Sbjct: 414 GYGATHLAR-------SIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIPR- 465
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
D V+WN++I++ E L+ +M+ +KP+ T V+ AC+ +ASLE ++
Sbjct: 466 -DIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKV 524
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H YI F++ + L+D+Y KCG L +R++FN M DV++W+ +I GY G
Sbjct: 525 HNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDA 584
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
A++ F +M PN +T + VL+AC+H GLV+EG +L+ M+ +Y + P +H +C
Sbjct: 585 RSAIEFFQQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKMQ-DYSVAPNLKHYAC 643
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+VDLL R+G + EAE + M D VW +LL+S
Sbjct: 644 MVDLLGRSGNLQEAEALVLSMPISPDGGVWGALLSS 679
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 144/291 (49%), Gaps = 10/291 (3%)
Query: 233 AYQPNEFIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
Y N FI + S ++F + LF+EI D WN++I S+ + A+ +
Sbjct: 62 GYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSIIKAHFSNGEYSRALDFY 121
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAK 346
MR E LP+ T+ ++ +C + G +H + K+G F + V ++ + MY+K
Sbjct: 122 QWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGSSAVGSSFVYMYSK 181
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE---ELFRLFSRMLASQIKPDHIT 403
C VL A VF E+ D V+W +++ C+Q+ +++ E R+ +P+ T
Sbjct: 182 CGVLEEAYGVFDEI-LFRDVVAWTALVIGCVQNGESKMGLECLCEMHRIGGDGERPNFRT 240
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
AC + +L LH + KTG+ + V + L+ +Y KCG+ A + F +
Sbjct: 241 LEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEAHRSFCEVL 300
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
N D++SW+S+I Y++ G E + +F M G+ P+ + + +L++ S+
Sbjct: 301 NKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSN 351
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/472 (22%), Positives = 191/472 (40%), Gaps = 107/472 (22%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP+ T G AC +L +L GR +H ++ + V+Q+ +L+MY KCG+ E+A
Sbjct: 235 RPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEAHR 294
Query: 92 GFDKMPQRNVVS---------------------WTAMIAGC----------------SQN 114
F ++ ++++S W +++G S
Sbjct: 295 SFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMR 354
Query: 115 YQENDAIKLYI--------QMLQSGVMPGQFTFGSIIKA------------------CSG 148
E A I QM+Q+ ++ FG + A SG
Sbjct: 355 VFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSG 414
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
G+ L R +H ++IK+ ++ N+LI MY K + AR +F I R D+ +W ++
Sbjct: 415 YGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIPR-DIVTWNTL 473
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA---------------- 252
I++++ G+ EAL +++M+ +PN SV SACS+ A
Sbjct: 474 ISSYAHCGHFAEALSLYDKMVLED-LKPNSATLVSVLSACSHLASLEEGEKVHNYINGGK 532
Query: 253 ------------------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
R +FN + D+ +WN +I+G H +A A+ F
Sbjct: 533 FEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEFFQ 592
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+M + P+GLT ++L AC + +G + + N+ ++ + +
Sbjct: 593 QMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKMQDYSVAPNLKHYACMVDLLGRSG 652
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
L A + + + D W +++++C HN+ E R+ + S ++ D
Sbjct: 653 NLQEAEALVLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIDSDVEND 704
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 136/312 (43%), Gaps = 43/312 (13%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
R+ + S + L R +H +++ + +V + N +++MYGK G+L AR
Sbjct: 399 RVNEQNFEAWNLMVSGYGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARR 458
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
F ++P R++V+W +I+ + +A+ LY +M+ + P T S++ ACS L S
Sbjct: 459 IFCRIP-RDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVSVLSACSHLAS 517
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ G ++H ++ + +L ALI MY K ++ +R +F+ + +DV +W MI+
Sbjct: 518 LEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISG 577
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA-----RILFNEID------ 260
+ G A+ F +M A +PN F +V SAC++ + LF ++
Sbjct: 578 YGMHGDARSAIEFFQQMEESSA-KPNGLTFLAVLSACAHAGLVKEGKYLFGKMQDYSVAP 636
Query: 261 ------------------------------SPDLASWNALIAGVASHSNANEAMSLFSEM 290
SPD W AL++ H+ + +
Sbjct: 637 NLKHYACMVDLLGRSGNLQEAEALVLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHA 696
Query: 291 RDRELLPDGLTV 302
D ++ DG V
Sbjct: 697 IDSDVENDGYYV 708
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 2/210 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +SS + EAL YD +++ +T ++SACS L SL+ G KVH++I
Sbjct: 471 NTLISSYAHCGHFAEALSLYD-KMVLEDLKPNSATLVSVLSACSHLASLEEGEKVHNYIN 529
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
K + ++ + +++MY KCG LE +R F+ M +R+V++W MI+G + AI+
Sbjct: 530 GGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIE 589
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ QM +S P TF +++ AC+ G V G+ L + +L ++ +
Sbjct: 590 FFQQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKMQDYSVAPNLKHYACMVDLLG 649
Query: 183 KFDRILDARN-VFSGIARKDVTSWGSMIAA 211
+ + +A V S D WG+++++
Sbjct: 650 RSGNLQEAEALVLSMPISPDGGVWGALLSS 679
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 81/165 (49%), Gaps = 1/165 (0%)
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+++SL+ + Q H +I +G + ++F+ + L+ +Y + +LF+ + + D W+S
Sbjct: 44 QISSLKTLLQSHAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNS 103
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
+I + G AL + MR+ PN T+ ++ +C+ + LV G ++ ++
Sbjct: 104 IIKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLG 163
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ S V + ++ G + EA +++ D+V W +L+
Sbjct: 164 LFSGSSAVGSSFVYMYSKCGVLEEAYGVFDEILFR-DVVAWTALV 207
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 165/581 (28%), Positives = 292/581 (50%), Gaps = 42/581 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T ++ +C++L ++ LGR VH DV + + ++ MY G L +AR FD +
Sbjct: 143 TLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGI 202
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+R+ V W M+ GC + + A++L+ M SG P T + C+ + G
Sbjct: 203 PERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGA 262
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
QLH+ +K + N L+AMY K + DA +F + + D+ +W MI+ + G
Sbjct: 263 QLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNG 322
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+EA F +M GA +P+ S+ A ++
Sbjct: 323 LFVEAFGLFYDMQRSGA-RPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLV 381
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A+ L++ + D+ + +I+G + + EA+ +F + ++ +
Sbjct: 382 SALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIK 441
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P+ +T+ S+L C L G Q+H Y+++ ++ V +A++ MYAKC L + +
Sbjct: 442 PNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYI 501
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F ++ + D V+WNS+I++ Q+ + +E LF +M IK ++IT + + ACA + +
Sbjct: 502 FLKMSQK-DEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPA 560
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
+ ++H K + D+F + L+D+Y KCG+L A ++F FM + + VSW+S+I
Sbjct: 561 IYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISA 620
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y G E++ L M+ G P+ VT + +++AC+H GLVEEG+ L++ M +Y I P
Sbjct: 621 YGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAP 680
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
EH +C+VDL +R+G + +A FI M D +W +LL
Sbjct: 681 RMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALL 721
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 152/591 (25%), Positives = 263/591 (44%), Gaps = 58/591 (9%)
Query: 40 GLISACSSLRSLQLGRKVHDHILLSKCQPD---VVLQNHILNMYGKCGSLEDARMGFDKM 96
++ C S L LG ++H ++S D + L +L MY DA F +
Sbjct: 37 AVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSAL 96
Query: 97 PQRNVVS---WTAMIAGCSQNYQENDAIKLYIQMLQ--SGVMPGQFTFGSIIKACSGLGS 151
P+ S W +I G + Q + A+ Y++M + P T ++K+C+ LG+
Sbjct: 97 PRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGA 156
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ LGR +H + + +AL+ MY + +AR+ F GI +D W M+
Sbjct: 157 MSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDG 216
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL---------------- 255
K G A+ F M G +PN S C+ A +L
Sbjct: 217 CIKAGDVDGAVRLFRNMRASGC-EPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEP 275
Query: 256 ------------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
F + DL +WN +I+G + EA LF +M+
Sbjct: 276 EVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQ 335
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
PD +T+ SLL A L QG +VH YI++ + +V + +A++ +Y KC +
Sbjct: 336 RSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVR 395
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A ++ + + D V +++I+ + + +EE ++F +L IKP+ +T V+ C
Sbjct: 396 MAQNLY-DAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGC 454
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
A MA+L + Q+H Y+ + +V + LMD+Y KCG L + +F M D V+W+
Sbjct: 455 ASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWN 514
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
S+I ++Q G EAL LF +M G+ N +T+ L+AC+ + + G ++ +
Sbjct: 515 SMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKG 574
Query: 532 YGIIPTREHC---SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P + S ++D+ A+ G + A M D + V W S++++
Sbjct: 575 ----PIKADIFAESALIDMYAKCGNLELALRVFEFMP-DKNEVSWNSIISA 620
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 222/481 (46%), Gaps = 44/481 (9%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T A +S C++ L G ++H + +P+V + N +L MY KC L+DA F+
Sbjct: 243 ATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFEL 302
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MPQ ++V+W MI+GC QN +A L+ M +SG P T S++ A + L + G
Sbjct: 303 MPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQG 362
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+++H +++++ + +AL+ +Y K + A+N++ DV +MI+ +
Sbjct: 363 KEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLN 422
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------------------- 254
G EAL F +L +PN SV C++ A +
Sbjct: 423 GMSEEALQMFRYLLEQ-CIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYV 481
Query: 255 -------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+F ++ D +WN++I+ + + EA+ LF +M +
Sbjct: 482 ESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGI 541
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
+ +T+ + L AC +Y G ++H IK +++ +A++ MYAKC L AL
Sbjct: 542 KYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALR 601
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF E + + VSWNSII+A H +E L M KPDH+TF ++ ACA
Sbjct: 602 VF-EFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAG 660
Query: 416 SLEMVTQL-HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSL 473
+E QL C K +A + ++D+Y + G L A + M PD W +L
Sbjct: 661 LVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGAL 720
Query: 474 I 474
+
Sbjct: 721 L 721
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 202/437 (46%), Gaps = 56/437 (12%)
Query: 3 NDYVSSLCKQNLYNEAL-VAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHD 59
N +S + L+ EA + YD ++ RP T L+ A + L L+ G++VH
Sbjct: 312 NGMISGCVQNGLFVEAFGLFYDMQRSGA----RPDSITLVSLLPALTDLNGLKQGKEVHG 367
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
+I+ + DV L + ++++Y KC + A+ +D +VV + MI+G N +
Sbjct: 368 YIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEE 427
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
A++++ +L+ + P T S++ C+ + ++ LG+Q+H +V+++ + ++AL+
Sbjct: 428 ALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMD 487
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY K R+ + +F +++KD +W SMI++FS+ G EAL F +M G + N
Sbjct: 488 MYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEG-IKYNNI 546
Query: 240 IFGSVFSACSNFARILFNE------IDSP---------------------DLA------- 265
+ SAC++ I + + I P +LA
Sbjct: 547 TISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFM 606
Query: 266 ------SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
SWN++I+ +H E++SL M++ PD +T +L+ AC + +G+
Sbjct: 607 PDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGV 666
Query: 320 QVHSYIIKMGF-DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
Q+ + K + ++ +Y++ L A+ ++ D+ W +++ AC
Sbjct: 667 QLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRV 726
Query: 379 HNQAE-------ELFRL 388
H E ELF+L
Sbjct: 727 HRNVELADIASQELFKL 743
>gi|302775226|ref|XP_002971030.1| hypothetical protein SELMODRAFT_94889 [Selaginella moellendorffii]
gi|300161012|gb|EFJ27628.1| hypothetical protein SELMODRAFT_94889 [Selaginella moellendorffii]
Length = 846
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 180/598 (30%), Positives = 296/598 (49%), Gaps = 54/598 (9%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ P +A I ACSS+ SL+ G +H +L S + D V+ N +LN Y K G + ++R
Sbjct: 203 LEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDGVVGNALLNFYAKAGLVHESR 262
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFG--SIIKACSG 148
F M +NVV+W+A++A +QN A++L+ +ML G+ P + T I++AC
Sbjct: 263 SLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGIAPNKVTIALLRIVEACDQ 322
Query: 149 LGSVCLGRQLHAHVIK-SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
++ R+LH + ++ AL+ MY + + DA+ VF + +++TSW +
Sbjct: 323 PDALDQARELHTRFFPGAAAAGDVVVATALVNMYGRCGSVSDAKTVFDEMQHRNITSWNA 382
Query: 208 MIAAFSKLGYELEALCHFNEMLHHG-AYQPNEFIFGSVFSACSNF----------ARI-- 254
M+ +S LEAL F ML G +P+ F S AC +RI
Sbjct: 383 MLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGMMGDLSRAVEIHSRISQ 442
Query: 255 ------------------------------LFNEIDSPDLASWNALIAGVASHSNANEAM 284
+ +E+ ++ SW ++I + + A+
Sbjct: 443 SWPSNQTDVVLGSALIKMYGNCRSLAGAAQVLDEMPRTNVISWTSMILACEQNEDNEAAI 502
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
++ M+ PD +T+ +++ A L +G++ H+ GF ++ V NA++T+Y
Sbjct: 503 HVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQAAAFGFATSTVVGNALVTLY 562
Query: 345 AKCSVLCNALLVFKELGKNA--DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
L A VFKEL + + D V+WNS+++A Q+ + R F RML PD
Sbjct: 563 GTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQALRTFQRMLHHGRHPDKT 622
Query: 403 TFNDVMGACAKMAS-LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
TF +++ ACA S L ++H GL D V N L+ +Y +CG+L ARK+F+
Sbjct: 623 TFVNILNACAGDPSKLLQAVKIHALAAACGLDSDTDVANTLLHMYSRCGNLSRARKVFHA 682
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
+ +VVSWS++ A G D AL+ F M G+ PN VT + +L+ CSH GL++E
Sbjct: 683 ITQKNVVSWSAMAAACAHNGDADGALQAFRGMLHGGIQPNAVTFISILSGCSHTGLMDEA 742
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ M +++ + PT +H +C++DLLARAG H AE+ + + V W SLL +
Sbjct: 743 VSYLYAMSSDHNLKPTVQHYACLLDLLARAGKFHRAEELATHL---PNPVAWNSLLGA 797
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 154/590 (26%), Positives = 286/590 (48%), Gaps = 62/590 (10%)
Query: 49 RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMI 108
++L GR VH ++ S D L N ++ MYG+C S+ DA F + ++NV +WT +I
Sbjct: 9 KNLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNVFTWTILI 68
Query: 109 AGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS--GLGSVCLGRQLHAHV---- 162
+ N +A++L+ +M GV +FTF +I++ACS GL + LG+ +H+ +
Sbjct: 69 VAHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTIHSRIHQQG 128
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK----DVTSWGSMIAAFSKLGYE 218
+K +I A+I Y + I A +F + + D+ +W +M+ A+++LG+
Sbjct: 129 LKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQGLDPDLIAWTAMMTAYNQLGHA 188
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACS----------------------------- 249
EAL F +M G +P+ F F + ACS
Sbjct: 189 REALLLFRKMDLQG-LEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDGVVGNA 247
Query: 250 --NF---------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
NF +R LF+ + ++ +W+A++A A + + A+ LF EM + P+
Sbjct: 248 LLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGIAPN 307
Query: 299 GLTVH--SLLCACIGRLTLYQGMQVHS-YIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
+T+ ++ AC L Q ++H+ + +V V A++ MY +C + +A
Sbjct: 308 KVTIALLRIVEACDQPDALDQARELHTRFFPGAAAAGDVVVATALVNMYGRCGSVSDAKT 367
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML--ASQIKPDHITFNDVMGACAK 413
VF E+ ++ + SWN+++ + ++ E R F ML +KPD ITF AC
Sbjct: 368 VFDEM-QHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGM 426
Query: 414 MASLEMVTQLHCYITKTGLA--FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
M L ++H I+++ + DV + + L+ +Y C SL A ++ + M +V+SW+
Sbjct: 427 MGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRSLAGAAQVLDEMPRTNVISWT 486
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
S+IL Q + A+ ++ M+ G P+ VT+V V+ A +++ ++ G+ +
Sbjct: 487 SMILACEQNEDNEAAIHVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIE-FHAQAAA 545
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA--DIVVWKSLLAS 579
+G + + +V L +G + AE+ ++ + D+V W S+L++
Sbjct: 546 FGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSA 595
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 141/537 (26%), Positives = 250/537 (46%), Gaps = 62/537 (11%)
Query: 37 TYAGLISACSSL--RSLQLGRKVHDHI----LLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
T++ ++ ACS+L L LG+ +H I L P V+ +++ Y + G +E A
Sbjct: 98 TFSAILEACSNLGLAFLSLGKTIHSRIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAA 157
Query: 91 MGFDKMPQR----NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
F++M + ++++WTAM+ +Q +A+ L+ +M G+ P +F F + I AC
Sbjct: 158 EIFERMQLQGLDPDLIAWTAMMTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDAC 217
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
S + S+ G LH+ ++ S + NAL+ Y K + ++R++FS + K+V +W
Sbjct: 218 SSIPSLEQGTVLHSRLLASSVECDGVVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWS 277
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG--SVFSACS--------------- 249
+++AA+++ G+ A+ F EML G PN+ + AC
Sbjct: 278 AIVAAYAQNGHHEPAVELFREMLLDG-IAPNKVTIALLRIVEACDQPDALDQARELHTRF 336
Query: 250 --------------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEA 283
+ A+ +F+E+ ++ SWNA++ + + + EA
Sbjct: 337 FPGAAAAGDVVVATALVNMYGRCGSVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEA 396
Query: 284 MSLFSEM--RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM--GFDSNVPVCNA 339
+ F M + PD +T S AC L + +++HS I + ++V + +A
Sbjct: 397 LRFFRTMLLEGEGVKPDAITFVSAADACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSA 456
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
++ MY C L A V E+ + + +SW S+I AC Q+ E ++ M KP
Sbjct: 457 LIKMYGNCRSLAGAAQVLDEMPRT-NVISWTSMILACEQNEDNEAAIHVYRAMQLHGHKP 515
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D +T V+ A A + L+ + H G A V N L+ +Y G L +A +F
Sbjct: 516 DPVTMVTVIKAAANLHDLKRGIEFHAQAAAFGFATSTVVGNALVTLYGTSGDLQAAENVF 575
Query: 460 NFMEN---PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
+ DVV+W+S++ + Q G ++AL+ F RM G P+ T V +L AC+
Sbjct: 576 KELLQQSVEDVVTWNSMLSAWNQNGLPNQALRTFQRMLHHGRHPDKTTFVNILNACA 632
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 181/400 (45%), Gaps = 61/400 (15%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLS--KCQPDVVLQNHILNMYGKCGSLED 88
++P T+ AC + L ++H I S Q DVVL + ++ MYG C SL
Sbjct: 410 VKPDAITFVSAADACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRSLAG 469
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A D+MP+ NV+SWT+MI C QN AI +Y M G P T ++IKA +
Sbjct: 470 AAQVLDEMPRTNVISWTSMILACEQNEDNEAAIHVYRAMQLHGHKPDPVTMVTVIKAAAN 529
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK---DVTSW 205
L + G + HA + + NAL+ +Y + A NVF + ++ DV +W
Sbjct: 530 LHDLKRGIEFHAQAAAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTW 589
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------- 249
SM++A+++ G +AL F MLHHG + P++ F ++ +AC+
Sbjct: 590 NSMLSAWNQNGLPNQALRTFQRMLHHGRH-PDKTTFVNILNACAGDPSKLLQAVKIHALA 648
Query: 250 -------------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
+ AR +F+ I ++ SW+A+ A A + +A+ A+
Sbjct: 649 AACGLDSDTDVANTLLHMYSRCGNLSRARKVFHAITQKNVVSWSAMAAACAHNGDADGAL 708
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV-PVCN---AI 340
F M + P+ +T S+L C + + + SY+ M D N+ P +
Sbjct: 709 QAFRGMLHGGIQPNAVTFISILSGCSHTGLMDEAV---SYLYAMSSDHNLKPTVQHYACL 765
Query: 341 LTMYAKCSVLCNALLVFKELGKN-ADSVSWNSIIAACLQH 379
L + A+ A +EL + + V+WNS++ ACL H
Sbjct: 766 LDLLARAGKFHRA----EELATHLPNPVAWNSLLGACLVH 801
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 262/485 (54%), Gaps = 42/485 (8%)
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF-- 184
ML SG P F S++K+C+ + + G +H +I+ G L NAL+ MY+KF
Sbjct: 1 MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60
Query: 185 ------DRILDARNVFSGIA--------------------RKDVTSWGSMIAAFSKLGYE 218
R D++ + GI R + S + Y+
Sbjct: 61 LEEGGVQRFCDSK-MLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNILYQ 119
Query: 219 LEALCH-FNEMLHHGAYQPNE---FIFGSVFSACSNFARILFNEIDSPDLASWNALIAGV 274
+ F+E Y E + GS+ R +F + D+ SWN +I+G
Sbjct: 120 VNTYKKVFDEGKTSDVYSKKEKESYYLGSL--------RKVFEMMPKRDIVSWNTVISGN 171
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
A + +A+ + EM + +L PD T+ S+L + L +G ++H Y I+ G+D++V
Sbjct: 172 AQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADV 231
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
+ ++++ MYAKC+ + ++ VF L ++ D +SWNSIIA C+Q+ +E + F +ML
Sbjct: 232 FIGSSLIDMYAKCTRVDDSCRVFYMLPQH-DGISWNSIIAGCVQNGMFDEGLKFFQQMLI 290
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
++IKP+H++F+ +M ACA + +L + QLH YI ++ +VF+ + L+D+Y KCG++ +
Sbjct: 291 AKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRT 350
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
AR +F+ ME D+VSW+++I+GYA G +A+ LF RM GV PN V + VLTACSH
Sbjct: 351 ARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSH 410
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
GLV+E + M +Y IIP EH + V DLL R G + EA +FI+ M + VW
Sbjct: 411 AGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWS 470
Query: 575 SLLAS 579
+LLA+
Sbjct: 471 TLLAA 475
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 159/317 (50%), Gaps = 15/317 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + ++ +AL+ N ++R T + ++ + +L G+++H + +
Sbjct: 165 NTVISGNAQNGMHEDALMMVR-EMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAI 223
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ DV + + +++MY KC ++D+ F +PQ + +SW ++IAGC QN ++ +K
Sbjct: 224 RNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLK 283
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ QML + + P +F SI+ AC+ L ++ LG+QLH ++I+S ++ +AL+ MY
Sbjct: 284 FFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYA 343
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I AR +F + D+ SW +MI ++ G+ +A+ F M G +PN F
Sbjct: 344 KCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGV-KPNYVAFM 402
Query: 243 SVFSACSNFARI-----LFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEMRD 292
+V +ACS+ + FN + P L + A+ + EA S+M
Sbjct: 403 AVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDM-- 460
Query: 293 RELLPDGLTVHSLLCAC 309
+ P G +LL AC
Sbjct: 461 -HIEPTGSVWSTLLAAC 476
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 148/339 (43%), Gaps = 50/339 (14%)
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R F+ MP+R++VSW +I+G +QN DA+ + +M + + P FT S++ +
Sbjct: 150 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 209
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
++ G+++H + I++ + + + ++LI MY K R+ D+ VF + + D SW S+I
Sbjct: 210 VNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSII 269
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------ 251
A + G E L F +ML +PN F S+ AC++
Sbjct: 270 AGCVQNGMFDEGLKFFQQML-IAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRF 328
Query: 252 ----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
AR +F++++ D+ SW A+I G A H +A +A+SLF
Sbjct: 329 DGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKR 388
Query: 290 MRDRELLPDGLTVHSLLCAC-----IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
M + P+ + ++L AC + Y Y I G + V + +
Sbjct: 389 MEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVAD----LL 444
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ L A ++ W++++AAC H E
Sbjct: 445 GRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIE 483
>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Glycine max]
Length = 703
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 179/591 (30%), Positives = 298/591 (50%), Gaps = 58/591 (9%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
R+ T GLI+ + R+++LG D N+++ Y KC L A
Sbjct: 3 RLHSLTLLGLIA--THCRAIKLGSIA-----------DPYTANNLITSYAKCTELNSAHQ 49
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD+MP R+ VSW A+I+ + + + +L M +S TFGSI+K + +G
Sbjct: 50 VFDEMPHRDTVSWNAIISAFASSGDLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGK 109
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ LG+QLH+ ++K ++ + +AL+ MY K R+ D VF + ++ SW +++A+
Sbjct: 110 LKLGQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVAS 169
Query: 212 FSKLG------------------------------------YELEALCHFNEMLHHGAYQ 235
+S++G Y+L H +++ HG
Sbjct: 170 YSRVGDCDMAFWVLSCMELEGVEIDDGTVSPLLTLLDNAMFYKLTMQLHC-KIVKHGLEL 228
Query: 236 PNEFIFGSV--FSACSNF---ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
N ++ +S C + R+ + DL +WN+++ H + A +F +M
Sbjct: 229 FNTVCNATITAYSECCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDM 288
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
++ PD T ++ AC + G +H +IK G D++VPV NA+++MY + +
Sbjct: 289 QNFGFEPDAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDR 348
Query: 351 C--NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
C +AL +F + D +WNSI+A +Q +E+ RLF +M I+ DH TF+ V+
Sbjct: 349 CMEDALRIFFSMDLK-DCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVI 407
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
+C+ +A+L++ Q H K G + +V + L+ +Y KCG + ARK F + +
Sbjct: 408 RSCSDLATLQLGQQFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAI 467
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
W+S+I GYAQ G G+ AL LF M+ V + +T V VLTACSH GLVEEG + M
Sbjct: 468 VWNSIIFGYAQHGQGNIALDLFYMMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESM 527
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
E+++GI P +EH +C +DL RAG + +A + M + D +V K+LL +
Sbjct: 528 ESDFGIPPRQEHYACAIDLYGRAGHLKKATALVETMPFEPDAMVLKTLLGA 578
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I I T++ +I +CS L +LQLG++ H L + + + ++ MY KCG +EDAR
Sbjct: 396 IEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDAR 455
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F+ + N + W ++I G +Q+ Q N A+ L+ M + V TF +++ ACS G
Sbjct: 456 KSFEATSKDNAIVWNSIIFGYAQHGQGNIALDLFYMMKERKVKLDHITFVAVLTACSHNG 515
Query: 151 SV 152
V
Sbjct: 516 LV 517
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 177/566 (31%), Positives = 282/566 (49%), Gaps = 44/566 (7%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-NVVSWTAMIAGCSQ 113
RK H I S DVV+ N I++MY KCG A F ++ + +V+SW M+
Sbjct: 355 RKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASED 414
Query: 114 NYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI--KSEHGSHL 171
+ + ML +G+ P + +F +I+ ACS ++ GR++H+ ++ + ++
Sbjct: 415 RKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESS 474
Query: 172 IAQNALIAMYTKFDRILDARNVFS--GIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
+A L++MY K I +A VF + + + +W M+ A+++ EA EML
Sbjct: 475 VA-TMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEML 533
Query: 230 HHGAYQPNEFIFGSVFSAC---------------SNF---------------------AR 253
G P+ F SV S+C S + AR
Sbjct: 534 Q-GGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQAR 592
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
+F+E+D D+ SW A+++ A + + E LF M+ ++PD T+ + L C+
Sbjct: 593 SVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDST 652
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
TL G +H+ + ++G ++++ V NA+L MY+ C AL F+ + K D VSWN +
Sbjct: 653 TLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETM-KARDLVSWNIMS 711
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
AA Q A+E LF M +KPD +TF+ + A + H ++GL
Sbjct: 712 AAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLD 771
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
DV V GL+ +Y KCG L A LF VV +++I AQ G +EA+K+F +M
Sbjct: 772 SDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKM 831
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
+ GV P++ TLV +++AC H G+VEEG + M+ +GI PT EH +C VDLL RAG
Sbjct: 832 QQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQ 891
Query: 554 VHEAEDFINQMACDADIVVWKSLLAS 579
+ AE I +M + + +VW SLL +
Sbjct: 892 LEHAEQIIRKMPFEDNTLVWTSLLGT 917
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 162/596 (27%), Positives = 278/596 (46%), Gaps = 65/596 (10%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y L+ +C L G++ H+ I + + + L N ++NMY +CGSLE+A F KM
Sbjct: 28 YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+RNVVSWTA+I+ +Q+ A L+ M L+S P +T +++ AC+ + +GR
Sbjct: 88 ERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147
Query: 157 QLHAHV----IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
+HA + ++ E + + NA+I MY K DA VF I KDV SW +M A+
Sbjct: 148 SIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAY 207
Query: 213 SK-LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
++ + +AL F EML PN F + AC++
Sbjct: 208 AQERRFYPDALRIFREMLLQ-PLAPNVITFITALGACTSLRDGTWLHSLLHEAGLGFDPL 266
Query: 252 -----------------ARILFNEIDSP---DLASWNALIAGVASHSNANEAMSLFSEMR 291
A +F + S DL SWNA+I+ +AM++F +R
Sbjct: 267 AGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLR 326
Query: 292 DRELLPDGLTVHSLLCACIGR-LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ P+ +T+ ++L A + + H I + G+ +V V NAI++MYAKC
Sbjct: 327 LEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFF 386
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
A VF+ + D +SWN+++ A ++ F ML + I P+ ++F ++ A
Sbjct: 387 SAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNA 446
Query: 411 CAKMASLEMVTQLHCYI-TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP--DV 467
C+ +L+ ++H I T+ + V L+ +Y KCGS+ A +F M P +
Sbjct: 447 CSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSL 506
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR- 526
V+W+ ++ YAQ EA M GV P+ ++ VL++C + + R
Sbjct: 507 VTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC----YCSQEAQVLRM 562
Query: 527 -IMENEYGIIPTREHC--SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
I+E+ Y R C + ++ + R + +A ++M D+V W +++++
Sbjct: 563 CILESGY-----RSACLETALISMHGRCRELEQARSVFDEMD-HGDVVSWTAMVSA 612
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 278/602 (46%), Gaps = 70/602 (11%)
Query: 35 PSTYA--GLISACSSLRSLQLGRKVHDHI----LLSKCQPDVVLQNHILNMYGKCGSLED 88
P++Y +++AC++ R L +GR +H I L + ++ N ++NMY KCGS ED
Sbjct: 125 PNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPED 184
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQ-ENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
A F +P+++VVSWTAM +Q + DA++++ +ML + P TF + + AC+
Sbjct: 185 AIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACT 244
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK---DVTS 204
L G LH+ + ++ G +A NALI MY K A VF +A + D+ S
Sbjct: 245 SLRD---GTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVS 301
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI--------------FG-------- 242
W +MI+A + G +A+ F + G +PN FG
Sbjct: 302 WNAMISASVEAGRHGDAMAIFRRLRLEG-MRPNSVTLITILNALAASGVDFGAARKFHGR 360
Query: 243 -----------------SVFSACSNF--ARILFNEIDSP-DLASWNALIAGVASHSNANE 282
S+++ C F A +F I D+ SWN ++ + +
Sbjct: 361 IWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGK 420
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD-SNVPVCNAIL 341
++ F M + P+ ++ ++L AC L G ++HS I+ D V ++
Sbjct: 421 VVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLV 480
Query: 342 TMYAKCSVLCNALLVFKELGKNADS-VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+MY KC + A LVFKE+ + S V+WN ++ A Q+++++E F ML + PD
Sbjct: 481 SMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPD 540
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
++F V+ +C S E C I ++G + L+ ++ +C L AR +F+
Sbjct: 541 ALSFTSVLSSC--YCSQEAQVLRMC-ILESGYR-SACLETALISMHGRCRELEQARSVFD 596
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
M++ DVVSW++++ A+ E LF RM+ GV P+ TL L C L
Sbjct: 597 EMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTC----LDST 652
Query: 521 GLHLYRIME---NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
L L +I+ E G+ + ++++ + G EA F M D+V W +
Sbjct: 653 TLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKAR-DLVSWNIMS 711
Query: 578 AS 579
A+
Sbjct: 712 AA 713
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 133/522 (25%), Positives = 235/522 (45%), Gaps = 77/522 (14%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQ-PDVVLQNHILNMYGKCGSLEDARMGFDK 95
++ +++ACS+ +L GRK+H IL + + + +++MYGKCGS+ +A + F +
Sbjct: 439 SFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKE 498
Query: 96 MP--QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
MP R++V+W M+ +QN + +A ++MLQ GV+P +F S++ +C C
Sbjct: 499 MPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC-----YC 553
Query: 154 --LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ L +++S + S + + ALI+M+ + + AR+VF + DV SW +M++A
Sbjct: 554 SQEAQVLRMCILESGYRSACL-ETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSA 612
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGS---------------------------- 243
++ + + + H + P++F +
Sbjct: 613 TAE-NRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEA 671
Query: 244 ----------VFSACSNFARIL--FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
++S C ++ L F + + DL SWN + A A A EA+ LF M+
Sbjct: 672 DIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQ 731
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ PD LT + L G + G H + G DS+V V ++ +YAKC L
Sbjct: 732 LEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLD 791
Query: 352 NALLVFKELGKNADSVSW-----NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
A+ +F+ + W N+II A QH +EE ++F +M ++PD T
Sbjct: 792 EAISLFR------GACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVS 845
Query: 407 VMGACAKMASLE------MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
++ AC +E + + + I+ T + FV D+ + G L A ++
Sbjct: 846 IISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFV-----DLLGRAGQLEHAEQIIR 900
Query: 461 FMENPD-VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
M D + W+SL LG + GD L R L + P+
Sbjct: 901 KMPFEDNTLVWTSL-LGTCKLQ-GDAELGERCAQRILELDPH 940
>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 692
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 179/586 (30%), Positives = 284/586 (48%), Gaps = 64/586 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++ L+ C+ + LQ G+ +H +L + V L N ++N+Y KCGS+ A++ F+ +
Sbjct: 12 SFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESI 71
Query: 97 PQRNVVSWTAMIAGCSQN--YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
++VVSW +I G SQ + ++L+ +M +P TF + A S
Sbjct: 72 TNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFG 131
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G Q HA IK+ + + ++LI MY K +LDAR VF I ++ SW ++I+ ++
Sbjct: 132 GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAM 191
Query: 215 LGYELEALCHFNEMLHH-GAYQPNEFIFGSVFSA-------------------------- 247
EA F M GA+ ++FI+ SV SA
Sbjct: 192 ERMAFEAWELFLLMRREEGAH--DKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIA 249
Query: 248 --------------CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
C + A F D +W+A+I G A +++EA++LF M
Sbjct: 250 SVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLN 309
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
P T ++ AC L +G Q+H Y +K G++ + + AKC L +A
Sbjct: 310 GNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDA 369
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
F L K D V W S RM +I P +T V+ AC+
Sbjct: 370 RKGFDYL-KEPDIVLWTS------------------CRMQMERIMPHELTMASVLRACSS 410
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+A+LE Q+H K G + +V + + L +Y KCGSL +F M + D+++W+++
Sbjct: 411 LAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAM 470
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I G +Q G G +AL+LF +R P+ VT V VL+ACSH+GLVE G +R+M +E+G
Sbjct: 471 ISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFG 530
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
IIP EH +C+VD+L+RAG +HE ++FI D + +W+ LL +
Sbjct: 531 IIPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGA 576
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 213/488 (43%), Gaps = 66/488 (13%)
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P +F ++ C+ + G+ +HA ++++ S + N+L+ +Y K I+ A+ V
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 194 FSGIARKDVTSWGSMIAAFSK---LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-- 248
F I KDV SW +I +S+ +GY + F M PN F VF+A
Sbjct: 68 FESITNKDVVSWNCLINGYSQKGTVGYSF-VMELFQRMRAENTL-PNGHTFSGVFTAASS 125
Query: 249 -----------------SNF---------------------ARILFNEIDSPDLASWNAL 270
SNF AR +F+ I + SW +
Sbjct: 126 SPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATI 185
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I+G A A EA LF MR E D S+L A ++ G Q+H +K G
Sbjct: 186 ISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGL 245
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
S V NA++TMY KC L +A F EL + D ++W+++I Q + E LF
Sbjct: 246 LSIASVGNALVTMYGKCGCLDDAFKTF-ELSGDKDDITWSAMITGYAQAGDSHEALNLFY 304
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
M + KP TF V+ AC+ + +LE Q+H Y K G ++ G + KCG
Sbjct: 305 NMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCG 364
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
SL ARK F++++ PD+V W+S RM+ + P+ +T+ VL
Sbjct: 365 SLVDARKGFDYLKEPDIVLWTS------------------CRMQMERIMPHELTMASVLR 406
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACS + +E+G ++ +YG S + + A+ G + + +M DI
Sbjct: 407 ACSSLAALEQGKQIH-AQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMP-SRDI 464
Query: 571 VVWKSLLA 578
+ W ++++
Sbjct: 465 MTWNAMIS 472
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 5/286 (1%)
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
L P + LL C + L +G +H+ +++ G S+V + N+++ +YAKC + A
Sbjct: 6 LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELF--RLFSRMLASQIKPDHITFNDVMGACA 412
LVF+ + N D VSWN +I Q F LF RM A P+ TF+ V A +
Sbjct: 66 LVFESI-TNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAAS 124
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
Q H KT +DVFV + L+++Y K G + ARK+F+ + + VSW++
Sbjct: 125 SSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWAT 184
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
+I GYA EA +LF MR + + VL+A + LV G ++ + +
Sbjct: 185 IISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIH-CLALKN 243
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G++ + +V + + GC+ +A +++ D D + W +++
Sbjct: 244 GLLSIASVGNALVTMYGKCGCLDDAFKTF-ELSGDKDDITWSAMIT 288
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 177/581 (30%), Positives = 285/581 (49%), Gaps = 43/581 (7%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A + AC+ L +VH + + D + + ++ Y CG ++ A P
Sbjct: 165 AAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPV 224
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
R+ VSW A++ +++ + ++ ++++SG ++T +++K C LG G+ +
Sbjct: 225 RSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAV 284
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H VIK + + N LI MY+K DA VF+ I DV MI+ F +
Sbjct: 285 HGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMA 344
Query: 219 LEALCHFNEMLHHGAYQPNEFIF-GSVFSAC-----------------SNFAR------- 253
EA F +M G +PN++ F G A S F+R
Sbjct: 345 PEAFDIFMQMSDMGV-KPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDA 403
Query: 254 ---------------ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
+ F+ + PD+ASWN L++G S +N + +F E+ +L +
Sbjct: 404 IVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLAN 463
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
T +L C + L G QVH+ ++K GF + V +L MY + NA LVF
Sbjct: 464 KYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFD 523
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
L K D SW +++ + ++ E+ F ML +P+ T + C+ +A L
Sbjct: 524 RL-KERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLG 582
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
QLH Y K+G V V + L+D+Y+KCG+L A LF+ + D+V W+++I GYA
Sbjct: 583 SGLQLHSYTIKSGWNSSV-VSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYA 641
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
Q G G +AL+ F M G P+ +T VGVL+ACSH GL++EG ++++ + YGI PT
Sbjct: 642 QHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTL 701
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH +C+VD+LA+AG + EAE IN+M D +WK++L +
Sbjct: 702 EHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGA 742
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 155/600 (25%), Positives = 285/600 (47%), Gaps = 58/600 (9%)
Query: 26 QNNTNIRIRPS---TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGK 82
+++ +R+R +YA + C++ R+L+ G+ +H +L S +PD L + +LNMY K
Sbjct: 48 RDDERLRLRAEELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCK 107
Query: 83 CGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI 142
CG L DAR FD MP R+VV+WTAM++ + A++L+ +M + GV+P F +
Sbjct: 108 CGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAA 167
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI-LDARNVFSGIARKD 201
+KAC+ + Q+HA +K E ++L+ Y + + R + R D
Sbjct: 168 LKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSD 227
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA--------- 252
V SW +++ +++ G + + F++++ G + +++ +V C
Sbjct: 228 V-SWNALLNEYARDGDYAKVMLVFDKLVESGD-EISKYTLPTVLKCCMELGLAKSGQAVH 285
Query: 253 -----------RIL--------------------FNEIDSPDLASWNALIAGVASHSNAN 281
R+L F ID PD+ + +I+ H A
Sbjct: 286 GLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAP 345
Query: 282 EAMSLFSEMRDRELLPDGLTVHSL--LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
EA +F +M D + P+ T L + + G + L + +H++I+K GF VC+A
Sbjct: 346 EAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCR--SIHAHIVKSGFSRTKGVCDA 403
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
I+ MY K + +A+L F +L + D SWN++++ N E R+F ++ +
Sbjct: 404 IVGMYVKTGAVQDAILAF-DLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLA 462
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
+ T+ ++ C + L Q+H + K+G D V L+D+Y++ G +AR +F
Sbjct: 463 NKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVF 522
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ ++ DV SW+ ++ YA+ G++A++ F M PN TL L+ CS + +
Sbjct: 523 DRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLG 582
Query: 520 EG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
G LH Y I + + S +VD+ + G + +AE ++ D+V W +++
Sbjct: 583 SGLQLHSYTIKSGWNSSVVS----SALVDMYVKCGNLADAEMLFDESDTH-DLVEWNTII 637
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 191/433 (44%), Gaps = 45/433 (10%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
+ ++ A A+D +++ ++P+ T+ GL S + L R +H HI+ S
Sbjct: 339 DRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTK 398
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ + I+ MY K G+++DA + FD M ++ SW +++G ++++ +++
Sbjct: 399 GVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICE 458
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
GV+ ++T+ I++ C+ L + G Q+HA V+KS L+ MY + +A
Sbjct: 459 GVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNA 518
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
R VF + +DV SW +++ ++K +A+ F ML +PN+ + S CS+
Sbjct: 519 RLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENK-RPNDATLATSLSVCSD 577
Query: 251 FA---------------------------------------RILFNEIDSPDLASWNALI 271
A +LF+E D+ DL WN +I
Sbjct: 578 LACLGSGLQLHSYTIKSGWNSSVVSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTII 637
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GF 330
G A H + +A+ F EM D +PD +T +L AC L +G + + + G
Sbjct: 638 CGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGI 697
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+ ++ + AK L A + E+ D+ W +I+ AC H E R
Sbjct: 698 TPTLEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAE 757
Query: 391 RMLASQIKPDHIT 403
++ SQ PD I+
Sbjct: 758 KLFESQ--PDDIS 768
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 168/544 (30%), Positives = 273/544 (50%), Gaps = 45/544 (8%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MYGKCGS+ DA F + N VSWT ++A ++N +A+ Y +M+ G+ P
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGS-HLIAQNALIAMYTKFDRILDARNVFSGI 197
F I CS + G+ LHA +++++ +I ALI MY + + AR F +
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG--AYQPNEFIFGSVFSACS------ 249
+K + +W ++IA +S+ G AL + +M+ +P+ F S ACS
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 250 ----------------------------------NFARILFNEIDSPDLASWNALIAGVA 275
AR +F+ + + D+ +WN +I+G A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
A +A+ LF M + P+ +T LL AC L QG +H + + G++S++
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300
Query: 336 VCNAILTMYAKCSV-LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
+ N +L MY KCS L A VF+ L + D ++WN +I A +Q+ QA++ +F +M
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERL-RTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
+ P+ IT ++V+ ACA + + +H I DV + N LM++Y +CGSL
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDD 419
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
+F + + +VSWS+LI YAQ G L+ F + G++ + VT+V L+ACSH
Sbjct: 420 TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSH 479
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
G+++EG+ + M ++G+ P H C+VDLL+RAG + AE+ I+ M D V W
Sbjct: 480 GGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539
Query: 575 SLLA 578
SLL+
Sbjct: 540 SLLS 543
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 148/518 (28%), Positives = 248/518 (47%), Gaps = 50/518 (9%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
V++ + Y EAL Y +R + + I CSS + L+ G+ +H IL ++
Sbjct: 30 VAAFARNGHYREAL-GYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQ 88
Query: 66 C-QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
+ D++L ++ MY +C LE AR FD+M ++ +V+W A+IAG S+N A+K+Y
Sbjct: 89 LLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIY 148
Query: 125 IQMLQ---SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
M+ G+ P TF S + ACS +G + GR++ A + S + S I QNALI MY
Sbjct: 149 QDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMY 208
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
+K + AR VF + +DV +W +MI+ ++K G +AL F M + +PN F
Sbjct: 209 SKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDP-KPNVVTF 267
Query: 242 GSVFSACSNF-----------------------------------------ARILFNEID 260
+ +AC+N AR +F +
Sbjct: 268 IGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLR 327
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ D+ +WN LI + A +A+ +F +M+ + P+ +T+ ++L AC QG
Sbjct: 328 TRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKA 387
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
VH+ I ++V + N+++ MY +C L + + VF + ++ VSW+++IAA QH
Sbjct: 388 VHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAI-RDKSLVSWSTLIAAYAQHG 446
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVFVM 439
+ F +L + D +T + AC+ L E V + GLA D
Sbjct: 447 HSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHF 506
Query: 440 NGLMDIYIKCGSLGSARKLFNFMEN-PDVVSWSSLILG 476
++D+ + G L +A L + M PD V+W+SL+ G
Sbjct: 507 LCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSG 544
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 189/411 (45%), Gaps = 47/411 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T++ + ACS + + GR++ + S D ++QN ++NMY KCGSLE AR FD++
Sbjct: 165 TFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRL 224
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+V++W MI+G ++ A++L+ +M + P TF ++ AC+ L + GR
Sbjct: 225 KNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGR 284
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL-DARNVFSGIARKDVTSWGSMIAAFSKL 215
+H V + + S L+ N L+ MYTK L +AR VF + +DV +W +I A+ +
Sbjct: 285 AIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQY 344
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------------- 249
G +AL F +M PNE +V SAC+
Sbjct: 345 GQAKDALDIFKQMQLENV-APNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVL 403
Query: 250 -NFARILFNEIDSPD-------------LASWNALIAGVASHSNANEAMSLFSEMRDREL 295
N ++N S D L SW+ LIA A H ++ + F E+ L
Sbjct: 404 ENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGL 463
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY---AKCSVLCN 352
D +T+ S L AC L +G+Q S++ +G P L M ++ L
Sbjct: 464 AADDVTMVSTLSACSHGGMLKEGVQ--SFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEA 521
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
A + ++ D+V+W S+++ C HN + R+ ++ + + +H T
Sbjct: 522 AENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHST 572
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 160/318 (50%), Gaps = 16/318 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S KQ +AL + N + + T+ GL++AC++L L+ GR +H +
Sbjct: 233 NTMISGYAKQGAATQALELFQRMGPN-DPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVK 291
Query: 63 LSKCQPDVVLQNHILNMYGKCGS-LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ D+V+ N +LNMY KC S LE+AR F+++ R+V++W +I Q Q DA+
Sbjct: 292 EHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDAL 351
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
++ QM V P + T +++ AC+ LG+ G+ +HA + + ++ +N+L+ MY
Sbjct: 352 DIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMY 411
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
+ + D VF+ I K + SW ++IAA+++ G+ L HF E+L G ++
Sbjct: 412 NRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEG-LAADDVTM 470
Query: 242 GSVFSACS----------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
S SACS +F ++ + +PD + ++ ++ A +L +M
Sbjct: 471 VSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDM- 529
Query: 292 DRELLPDGLTVHSLLCAC 309
LPD + SLL C
Sbjct: 530 --PFLPDAVAWTSLLSGC 545
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 166/521 (31%), Positives = 263/521 (50%), Gaps = 43/521 (8%)
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
+V W ++ C AI+ ++ M + T ++ A +G + LG+Q+H
Sbjct: 868 DVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVH 927
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
+KS S + N+L+ MY+K AR VF+ + D+ SW SMI++ ++ E
Sbjct: 928 GIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEE 987
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------------- 251
E++ F ++LH G +P+ F SV ACS+
Sbjct: 988 ESVNLFIDLLHEG-LKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATT 1046
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
A LF D DLA WNA++ G ++ +A+ LFS + D
Sbjct: 1047 LIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSD 1106
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+T+ + AC + L QG Q+H++ IK GFDS++ V + IL MY KC + NA +VF
Sbjct: 1107 QITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFN 1166
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ D V+W S+I+ C+ + ++ R++ RM S++ PD TF ++ A + + +LE
Sbjct: 1167 YISA-PDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALE 1225
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
QLH + K D FV L+D+Y KCG++ A +LF M ++ W+++++G A
Sbjct: 1226 QGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLA 1285
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
Q G +EA+ LF M+S G+ P+ V+ +G+L+ACSH GL E M N+YGI P
Sbjct: 1286 QHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEI 1345
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH SC+VD L RAG V EA+ I M A + ++LL +
Sbjct: 1346 EHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGA 1386
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 164/561 (29%), Positives = 272/561 (48%), Gaps = 29/561 (5%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+ S +L LG+ H I++S D L N++L MY KCGSL AR FD P+R+
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 101 VVSWTAMIAGCSQNYQENDA-----IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+V+W A++ + + ND + L+ + S + T ++K C G +
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+H + IK + AL+ +Y+K R+ DAR +F + +DV W M+ + +L
Sbjct: 747 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806
Query: 216 GYELEALCHFNEMLHHGAYQPNEF----IFGSVFSACSNFARILFNEI-----------D 260
G E EA F+E H +P+EF I V + + L +++ D
Sbjct: 807 GLEKEAFQLFSE-FHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDD 865
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+PD+ WN ++ + A+ F M + D +T+ +L A G L G Q
Sbjct: 866 NPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQ 925
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
VH +K G DS+V V N+++ MY+K A VF ++ K+ D +SWNS+I++C Q +
Sbjct: 926 VHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDM-KHLDLISWNSMISSCAQSS 984
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS-LEMVTQLHCYITKTGLAFDVFVM 439
EE LF +L +KPDH T V+ AC+ + L + Q+H + KTG D FV
Sbjct: 985 LEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVA 1044
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
L+D+Y K G + A LF ++ D+ W++++ GY G +AL+LF+ + G
Sbjct: 1045 TTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEK 1104
Query: 500 PNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
+ +TL AC + L+++G +H + I + G S ++D+ + G + A
Sbjct: 1105 SDQITLATAAKACGCLVLLDQGKQIHAHAI---KAGFDSDLHVNSGILDMYIKCGDMVNA 1161
Query: 558 EDFINQMACDADIVVWKSLLA 578
N ++ D V W S+++
Sbjct: 1162 GIVFNYISA-PDDVAWTSMIS 1181
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/527 (25%), Positives = 245/527 (46%), Gaps = 54/527 (10%)
Query: 1 FSNDYVSSLCKQNLYNEALVAYD--------FSQNNTNIRIRPSTYAGLISACSSLRSLQ 52
S+D C +E L A D + N NI T +++A + L+
Sbjct: 862 LSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLE 921
Query: 53 LGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCS 112
LG++VH + S DV + N ++NMY K G AR F+ M +++SW +MI+ C+
Sbjct: 922 LGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCA 981
Query: 113 QNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL-GSVCLGRQLHAHVIKSEHGSHL 171
Q+ E +++ L+I +L G+ P FT S+++ACS L + + RQ+H H +K+ + +
Sbjct: 982 QSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADS 1041
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH 231
LI +Y+K ++ +A +F D+ W +M+ + +G + + ++H
Sbjct: 1042 FVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYI-IGNDGKKALELFSLIHK 1100
Query: 232 GAYQPNEFIFGSVFSAC------------------SNF---------------------- 251
+ ++ + AC + F
Sbjct: 1101 SGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVN 1160
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
A I+FN I +PD +W ++I+G + N ++A+ ++ MR ++PD T +L+ A
Sbjct: 1161 AGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSC 1220
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS-WN 370
L QG Q+H+ +IK+ S+ V +++ MYAKC + +A +FK++ N +++ WN
Sbjct: 1221 VTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKM--NVRNIALWN 1278
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA-SLEMVTQLHCYITK 429
+++ QH AEE LF M + I+PD ++F ++ AC+ + E LH
Sbjct: 1279 AMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPND 1338
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
G+ ++ + L+D + G + A K+ M S + +LG
Sbjct: 1339 YGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 1385
>gi|15231572|ref|NP_189286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273843|sp|Q9LRV2.1|PP256_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g26540
gi|9293933|dbj|BAB01836.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643655|gb|AEE77176.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 700
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 167/601 (27%), Positives = 282/601 (46%), Gaps = 73/601 (12%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y L +CSS + RKV H++ P + L N + YGKCG ++DAR F++MP
Sbjct: 64 YERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMP 123
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+R+ SW A+I C+QN ++ +++ +M + GV + +F ++K+C + + L RQ
Sbjct: 124 ERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQ 183
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
LH V+K + ++ + +++ +Y K + DAR VF I SW ++ + ++G+
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGF 243
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------------------- 249
EA+ F +ML +P SV ACS
Sbjct: 244 NDEAVVMFFKMLELNV-RPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVST 302
Query: 250 ------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
AR +F++ S DL SW + ++G A EA LF M +R ++
Sbjct: 303 SVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVS 362
Query: 298 -------------------------------DGLTVHSLLCACIGRLTLYQGMQVHSYII 326
D +T+ +L C G + G Q H +I
Sbjct: 363 WNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIY 422
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+ G+D+NV V NA+L MY KC L +A + F+++ + D VSWN+++ + ++E+
Sbjct: 423 RHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQAL 482
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
F M + KP T ++ CA + +L + +H ++ + G DV + ++D+Y
Sbjct: 483 SFFEGMQV-EAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMY 541
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KC A ++F D++ W+S+I G + G E +LF + + GV P+ VT +
Sbjct: 542 SKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFL 601
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
G+L AC G VE G + M +Y I P EH C+++L + GC+H+ E+F+ M
Sbjct: 602 GILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPF 661
Query: 567 D 567
D
Sbjct: 662 D 662
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 168/367 (45%), Gaps = 41/367 (11%)
Query: 247 ACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
C + AR LF E+ D SWNA+I A + ++E +F M + + +L
Sbjct: 110 GCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVL 169
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
+C L L Q+H ++K G+ NV + +I+ +Y KC V+ +A VF E+ N
Sbjct: 170 KSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI-VNPSD 228
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
VSWN I+ L+ +E +F +ML ++P + T + VM AC++ +LE+ +H
Sbjct: 229 VSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAI 288
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG--- 483
K + D V + D+Y+KC L SAR++F+ + D+ SW+S + GYA G
Sbjct: 289 AVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREA 348
Query: 484 ----------------------------DEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
DEAL T MR + + VTLV +L CS +
Sbjct: 349 RELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGI 408
Query: 516 GLVEEGLH----LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
V+ G +YR + I+ + ++D+ + G + A + QM+ D V
Sbjct: 409 SDVQMGKQAHGFIYRHGYDTNVIV-----ANALLDMYGKCGTLQSANIWFRQMSELRDEV 463
Query: 572 VWKSLLA 578
W +LL
Sbjct: 464 SWNALLT 470
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 140/274 (51%), Gaps = 3/274 (1%)
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
L +C + + Q +V S+++ + + N + Y KC + +A +F+E+ +
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPER- 125
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
D SWN++I AC Q+ ++E+FR+F RM ++ +F V+ +C + L ++ QLH
Sbjct: 126 DGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLH 185
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
C + K G + +V + ++D+Y KC + AR++F+ + NP VSW+ ++ Y + G D
Sbjct: 186 CAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFND 245
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV 544
EA+ +F +M L V P T+ V+ ACS +E G ++ I + ++ + V
Sbjct: 246 EAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAI-AVKLSVVADTVVSTSV 304
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
D+ + + A +Q D+ W S ++
Sbjct: 305 FDMYVKCDRLESARRVFDQTR-SKDLKSWTSAMS 337
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 115/216 (53%), Gaps = 9/216 (4%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T +++ CS + +Q+G++ H I +V++ N +L+MYGKCG+L+ A + F +M
Sbjct: 397 TLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQM 456
Query: 97 PQ-RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ R+ VSW A++ G ++ + A+ + + +Q P ++T +++ C+ + ++ LG
Sbjct: 457 SELRDEVSWNALLTGVARVGRSEQALSFF-EGMQVEAKPSKYTLATLLAGCANIPALNLG 515
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTK---FDRILDARNVFSGIARKDVTSWGSMIAAF 212
+ +H +I+ + ++ + A++ MY+K FD ++ VF A +D+ W S+I
Sbjct: 516 KAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIE---VFKEAATRDLILWNSIIRGC 572
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
+ G E F +L + +P+ F + AC
Sbjct: 573 CRNGRSKEVFELFM-LLENEGVKPDHVTFLGILQAC 607
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 85/158 (53%), Gaps = 3/158 (1%)
Query: 30 NIRIRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
+ +PS Y A L++ C+++ +L LG+ +H ++ + DVV++ +++MY KC +
Sbjct: 489 QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFD 548
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
A F + R+++ W ++I GC +N + + +L++ + GV P TF I++AC
Sbjct: 549 YAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACI 608
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQ-NALIAMYTKF 184
G V LG Q + + H S + + +I +Y K+
Sbjct: 609 REGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKY 646
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 94/203 (46%), Gaps = 7/203 (3%)
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
++ L+H + + + S + AS + + + +C+ A + ++ ++
Sbjct: 31 TVTRQILEHLEGGNVSKAVSVLFASPEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTF 90
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
+F++N ++ Y KCG + AR+LF M D SW+++I AQ G DE ++F
Sbjct: 91 SPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMF 150
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME---NEYGIIPTREHCSCVVDL 547
RM GV + GVL +C GL+ + L L R + +YG + + +VD+
Sbjct: 151 RRMNRDGVRATETSFAGVLKSC---GLILD-LRLLRQLHCAVVKYGYSGNVDLETSIVDV 206
Query: 548 LARAGCVHEAEDFINQMACDADI 570
+ + +A +++ +D+
Sbjct: 207 YGKCRVMSDARRVFDEIVNPSDV 229
>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
Length = 693
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 177/553 (32%), Positives = 278/553 (50%), Gaps = 49/553 (8%)
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
PDVVL L+ K G L DA FD+MP++NVV+WT I+GC++N Q A ++ M
Sbjct: 40 PDVVLDCKRLDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADM 99
Query: 128 LQSGVMPGQF--TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
L+SGV F A +G G++ LG Q+H+ +++ + + LI +Y++
Sbjct: 100 LESGVAANDFACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCG 159
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSK---LGYELEALCHFNEMLHHGAYQPNEFIFG 242
+ A VF + DV + S+++A + L +E LC +M+ G QPNE
Sbjct: 160 SMWAAEEVFRRMEAPDVVGYTSLVSALCRNGDLARAVEVLC---QMMRQG-LQPNEHTMT 215
Query: 243 SVFSACS------------------------------------NFARILFNEIDSPDLAS 266
S+ + C + A +F +DS ++ S
Sbjct: 216 SMLAECPRMIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVS 275
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
W +++ +A+ +FSEM + P+ L AC G + L G Q+H I
Sbjct: 276 WCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFAFSIALGAC-GSVCL--GRQIHCSAI 332
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
K +++ V NA+L+MY + + V ++ +N D VSW + I+A Q+ +E+
Sbjct: 333 KCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKI-ENPDLVSWTAAISANFQNGFSEKAV 391
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
L +M + P+ F+ + +CA +A L+ QLHC K G F V N L+++Y
Sbjct: 392 ALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALINMY 451
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KCG +GSAR F+ M DV+SW+SLI G AQ G + L+ F+ M S G P+ T +
Sbjct: 452 SKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDSTFI 511
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
VL C+H GLV+EG +R+M + YG+ PT H +C++D+L R G EA I M
Sbjct: 512 AVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNMPF 571
Query: 567 DADIVVWKSLLAS 579
+ D+++WK+LLAS
Sbjct: 572 EPDVLIWKTLLAS 584
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 208/461 (45%), Gaps = 45/461 (9%)
Query: 53 LGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCS 112
LG +VH + + D + + ++ +Y +CGS+ A F +M +VV +T++++
Sbjct: 128 LGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALC 187
Query: 113 QNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
+N A+++ QM++ G+ P + T S++ C + +G Q+H +++K +
Sbjct: 188 RNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPRM----IGEQIHGYMLKVMGSQSVY 243
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
A ALI Y+++ A VF + K+V SW SM+ + G +AL F+EM+
Sbjct: 244 ASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISE- 302
Query: 233 AYQPNEFIFGSVFSAC-----------------------------SNFARILF------- 256
A +PNEF F AC S + R F
Sbjct: 303 AVEPNEFAFSIALGACGSVCLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAV 362
Query: 257 -NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
+I++PDL SW A I+ + + +A++L +M P+ S L +C L
Sbjct: 363 LGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALL 422
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
QG Q+H +K+G D V NA++ MY+KC + +A L F + + D +SWNS+I
Sbjct: 423 DQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLH-DVMSWNSLIHG 481
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAF 434
QH A + FS M +S +PD TF V+ C + E T + GL
Sbjct: 482 LAQHGAANLVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTP 541
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + G A + M PDV+ W +L+
Sbjct: 542 TPSHYACMIDMLGRNGRFDEALHMIKNMPFEPDVLIWKTLL 582
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 169/385 (43%), Gaps = 49/385 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T +++ C + +G ++H ++L V +++ Y + G + A F+ +
Sbjct: 213 TMTSMLAECPRM----IGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENL 268
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+NVVSW +M+ C ++ + DA++++ +M+ V P +F F + AC GSVCLGR
Sbjct: 269 DSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFAFSIALGAC---GSVCLGR 325
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H IK + + NAL++MY + + + V I D+ SW + I+A + G
Sbjct: 326 QIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNG 385
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+ +A+ +M H + PN++ F S S+C++
Sbjct: 386 FSEKAVALLLQM-HSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTG 444
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR+ F+ ++ D+ SWN+LI G+A H AN + FSEM
Sbjct: 445 NALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQ 504
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD T ++L C + +G + + G ++ M + AL
Sbjct: 505 PDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALH 564
Query: 356 VFKELGKNADSVSWNSIIAACLQHN 380
+ K + D + W +++A+C H
Sbjct: 565 MIKNMPFEPDVLIWKTLLASCKLHK 589
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 145/306 (47%), Gaps = 22/306 (7%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
+ P+ +A I A + S+ LGR++H + D+ + N +L+MYG+ G + +
Sbjct: 304 VEPNEFAFSI-ALGACGSVCLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAV 362
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
K+ ++VSWTA I+ QN A+ L +QM G P + F S + +C+ L +
Sbjct: 363 LGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALL 422
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
GRQLH +K + NALI MY+K +I AR F + DV SW S+I
Sbjct: 423 DQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGL 482
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNEID-SP 262
++ G L F+EM G +QP++ F +V C++ F R++ + +P
Sbjct: 483 AQHGAANLVLEAFSEMCSSG-WQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTP 541
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC-------IGRLTL 315
+ + +I + + +EA+ + M PD L +LL +C IG+L
Sbjct: 542 TPSHYACMIDMLGRNGRFDEALHMIKNM---PFEPDVLIWKTLLASCKLHKNLDIGKLAT 598
Query: 316 YQGMQV 321
+ M++
Sbjct: 599 DKLMEL 604
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 8/205 (3%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN ++E VA ++ ++ +S+C+ L L GR++H L C V
Sbjct: 383 QNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVC 442
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
N ++NMY KCG + AR+ FD M +V+SW ++I G +Q+ N ++ + +M SG
Sbjct: 443 TGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSG 502
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG-----SHLIAQNALIAMYTKFDR 186
P TF +++ C+ G V G ++ +G SH ++ +FD
Sbjct: 503 WQPDDSTFIAVLVGCNHAGLVKEGETFF-RLMTDRYGLTPTPSHYACMIDMLGRNGRFDE 561
Query: 187 ILDARNVFSGIARKDVTSWGSMIAA 211
L + + DV W +++A+
Sbjct: 562 AL--HMIKNMPFEPDVLIWKTLLAS 584
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 157/481 (32%), Positives = 258/481 (53%), Gaps = 46/481 (9%)
Query: 140 GSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR 199
GS++ C+ + + G LHA +K+ S +I N +I +Y+K ++ AR +F ++
Sbjct: 7 GSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSD 66
Query: 200 KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------- 251
+++ SW ++I+ + + G L AL F++M PNE++F SV SAC++
Sbjct: 67 RNLVSWSAIISGYDQTGQPLLALNLFSQM----RIVPNEYVFASVISACASLTALSQGLQ 122
Query: 252 --------------------------------ARILFNEIDSPDLASWNALIAGVASHSN 279
A ++ N + P+ S+NALIAG +
Sbjct: 123 VHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQ 182
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
+ + F MR + PD T LL C ++GMQ+H +IK+ + + + N
Sbjct: 183 PEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNV 242
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML-ASQIK 398
I+TMY+K +++ A VF L K D +SWN+++ AC E R+F ML +K
Sbjct: 243 IITMYSKFNLIEEAEKVFG-LIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVK 301
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
PD TF V+ ACA +AS+ Q+H ++ +T DV V N L+++Y KCGS+ ++ +
Sbjct: 302 PDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDV 361
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
F + ++VSW+++I + G G AL+ F +M+++G+ P+ VT VG+LTAC+H GLV
Sbjct: 362 FRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLV 421
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
EEG + ME YGI P EH SC++DLL RAG + EAE+++ ++ D ++ SLL+
Sbjct: 422 EEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLS 481
Query: 579 S 579
+
Sbjct: 482 A 482
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 215/468 (45%), Gaps = 53/468 (11%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P L+ C+ +++ G +H L + D+++ NH++N+Y KCG++ AR FD
Sbjct: 3 PEAIGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFD 62
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+M RN+VSW+A+I+G Q Q A+ L+ QM ++P ++ F S+I AC+ L ++
Sbjct: 63 EMSDRNLVSWSAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQ 119
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G Q+HA +K S NALI+MY K DA V + ++ + S+ ++IA F +
Sbjct: 120 GLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVE 179
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------- 251
+ + F M G + P+ F F + C+++
Sbjct: 180 NQQPEKGIEAFKVMRQKG-FAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAF 238
Query: 252 -----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
A +F I DL SWN L+ + A+ +F +M D
Sbjct: 239 IGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVC 298
Query: 295 LL-PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ PD T +L AC G ++ G Q+H ++I+ +V V NA++ MYAKC + N+
Sbjct: 299 FVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNS 358
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
VF+ + + VSWN+IIAA H F +M I PD +TF ++ AC
Sbjct: 359 YDVFRRT-SDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNH 417
Query: 414 MASLEMVTQLHCYITKTGLAFDVFV----MNGLMDIYIKCGSLGSARK 457
+V + Y A+ +F + L+D+ + G L A +
Sbjct: 418 AG---LVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEE 462
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 172/395 (43%), Gaps = 45/395 (11%)
Query: 29 TNIRIRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
+ +RI P+ Y A +ISAC+SL +L G +VH L C + N +++MY KCG
Sbjct: 93 SQMRIVPNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCGLC 152
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
DA + + M + N VS+ A+IAG +N Q I+ + M Q G P +FTF ++ C
Sbjct: 153 TDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGIC 212
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
+ G QLH +IK N +I MY+KF+ I +A VF I KD+ SW
Sbjct: 213 TSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWN 272
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------ 254
+++ A AL F +ML +P++F F V +AC+ A I
Sbjct: 273 TLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIR 332
Query: 255 ----------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
+F +L SWN +IA +H A+
Sbjct: 333 TRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEH 392
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH--SYIIKMGFDSNVPVCNAILTMY 344
F +M+ + PD +T LL AC L + QV+ S G N+ + ++ +
Sbjct: 393 FEKMKTVGIHPDSVTFVGLLTAC-NHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLL 451
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+ L A ++L D + S+++AC H
Sbjct: 452 GRAGRLQEAEEYMEKLPFGHDPIILGSLLSACRLH 486
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 175/599 (29%), Positives = 299/599 (49%), Gaps = 50/599 (8%)
Query: 24 FSQNN---TNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMY 80
SQ N N+ P+ A L+ CSSL+ L R + I + + + Q +++++
Sbjct: 25 LSQRNYIPANVYEHPA--ALLLERCSSLKEL---RHILPLIFKNGLYQEHLFQTKLVSLF 79
Query: 81 GKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFG 140
+ GS+++A F+ + ++ V + M+ G ++ + A+K +++M V P + F
Sbjct: 80 CRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFT 139
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
++K C + +G+++H ++KS L A L MY K ++ +AR VF + +
Sbjct: 140 YLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPER 199
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------- 251
D+ SW +++A +S+ G AL N M +P+ SV A S
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVNLMCEEN-LKPSFITIVSVLPAVSALRLIRIGKEI 258
Query: 252 -------------------------------ARILFNEIDSPDLASWNALIAGVASHSNA 280
AR+LF+ + ++ SWN++I + N
Sbjct: 259 HGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENP 318
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
EAM +F +M D + P ++V L AC L +G +H +++ D NV V N++
Sbjct: 319 KEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSL 378
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
++MY KC + A +F +L ++ VSWN++I Q+ + E FS+M A +KPD
Sbjct: 379 ISMYCKCKEVDTAASMFGKL-QSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPD 437
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T+ V+ A A+++ +H + + L +VFV L+D+Y KCG++ AR +F+
Sbjct: 438 TFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFD 497
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
M V +W+++I GY G G AL+LF M+ + PN VT + V++ACSH GLVE
Sbjct: 498 MMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEA 557
Query: 521 GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
GL + +M+ Y I P+ +H +VDLL RAG ++EA DFI QM + V+ ++L +
Sbjct: 558 GLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGA 616
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 142/300 (47%), Gaps = 16/300 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDH 60
N + + + EA+V + Q + ++P+ + G + AC+ L L+ GR +H
Sbjct: 306 NSMIDAYVQNENPKEAMVIF---QKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKL 362
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ + +V + N +++MY KC ++ A F K+ R +VSW AMI G +QN + +A
Sbjct: 363 SVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEA 422
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ + QM V P FT+ S+I A + L + +H V+++ ++ AL+ M
Sbjct: 423 LNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDM 482
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K I+ AR +F ++ + VT+W +MI + G AL F EM G +PN
Sbjct: 483 YAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEM-QKGTIRPNGVT 541
Query: 241 FGSVFSACSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
F SV SACS+ F + N P + + A++ + NEA +M
Sbjct: 542 FLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQM 601
>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 713
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 180/588 (30%), Positives = 293/588 (49%), Gaps = 38/588 (6%)
Query: 26 QNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS 85
Q N ST ++ S R+L GR VH I+ + N ++N Y KCG
Sbjct: 7 QTEINPFSHTSTLLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQ 66
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQN---YQENDAIKLYIQMLQSGVMPGQFTFGSI 142
L A F+ + ++VVSW ++I G SQN + ++L+ +M ++P +T I
Sbjct: 67 LAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGI 126
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK------------------- 183
KA S L S +GRQ HA V+K + +L+ MY K
Sbjct: 127 FKAESSLQSCTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLKYLYMVYYGFWLCYKK 186
Query: 184 --FDRILDARNVFSGIARKDVTSWGSMIAAFSKL--------GYELEALCHFNEMLHHGA 233
R L + F K+ S A S L G ++ + N +L A
Sbjct: 187 DVLRRQLKSSICFLEEKEKESDSDYVFTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVA 246
Query: 234 YQPNEFIFGSVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
N + +++S C N A +F+ + +W+A++ G + + + EA+ LFS M
Sbjct: 247 L-SNALV--TMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMF 303
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ P T+ +L AC L +G Q+HS+++K+GF+ ++ A++ MYAK L
Sbjct: 304 SAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLA 363
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A F L + D W S+I+ +Q++ EE L+ RM + I P+ T V+ AC
Sbjct: 364 DARKGFDCL-QERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKAC 422
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ +A+LE+ Q+H + K G +V + + L +Y KCGSL +F N DVVSW+
Sbjct: 423 SSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYTKCGSLEDGNLVFRRTPNKDVVSWN 482
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
++I G + G GDEAL+LF M + G P+ VT V +++ACSH G VE G + +M ++
Sbjct: 483 AMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNIISACSHKGFVERGWSYFHMMSDQ 542
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+G+ P +H +C+VD+L+RAG + E ++FI + D + +W+ LL++
Sbjct: 543 FGLDPKVDHYACMVDVLSRAGQLKETKEFIESASIDHGLCLWRILLSA 590
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/501 (25%), Positives = 231/501 (46%), Gaps = 60/501 (11%)
Query: 123 LYIQMLQSGVMPGQFTFGSIIKAC---SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
+Y Q+ + P T +++KA S ++ GR +HA +I++ + N L+
Sbjct: 1 MYPSTFQTEINPFSHT-STLLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVN 59
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG---YELEALCHFNEMLHHGAYQP 236
Y K ++ A ++F+ I KDV SW S+I +S+ G + F EM P
Sbjct: 60 FYAKCGQLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDIL-P 118
Query: 237 NEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSL---------- 286
N + +F A S+ +AL+ ++S + SL
Sbjct: 119 NAYTLAGIFKAESSLQSCTVGR-------QAHALVVKMSSFGDIYVDTSLVGMYCKAGLK 171
Query: 287 ---------------------------FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
F E +++E D ++L + + + G
Sbjct: 172 YLYMVYYGFWLCYKKDVLRRQLKSSICFLEEKEKESDSD-YVFTAVLSSLAATVYVGLGR 230
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
Q+H +K G V + NA++TMY+KC L A +F G + +S++W++++ Q+
Sbjct: 231 QIHGITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSG-DRNSITWSAMVTGYSQN 289
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
++ E +LFSRM ++ IKP T V+ AC+ + L QLH ++ K G +F
Sbjct: 290 GESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFERHLFAT 349
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
L+D+Y K G L ARK F+ ++ DV W+SLI GY Q +EAL L+ RM++ G+
Sbjct: 350 TALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGII 409
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGI-IPTREHCSCVVDLLARAGCVHEA 557
PN T+ VL ACS + +E G ++ +++ +G+ +P S + + + G + +
Sbjct: 410 PNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG---SALSTMYTKCGSLEDG 466
Query: 558 EDFINQMACDADIVVWKSLLA 578
+ + + + D+V W ++++
Sbjct: 467 -NLVFRRTPNKDVVSWNAMIS 486
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 83/140 (59%), Gaps = 1/140 (0%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
EAL+ Y + I P T A ++ ACSSL +L+LG++VH H + +V + +
Sbjct: 394 EEALILYRRMKTAGIIPNDP-TMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSA 452
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
+ MY KCGSLED + F + P ++VVSW AMI+G S N Q ++A++L+ +ML G P
Sbjct: 453 LSTMYTKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPD 512
Query: 136 QFTFGSIIKACSGLGSVCLG 155
TF +II ACS G V G
Sbjct: 513 DVTFVNIISACSHKGFVERG 532
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 188/601 (31%), Positives = 303/601 (50%), Gaps = 51/601 (8%)
Query: 28 NTNIRIR-------PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMY 80
NT R+R + A +IS+C L + LG ++ H L + V N ++ M+
Sbjct: 146 NTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMF 205
Query: 81 GKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFG 140
G CG + +A F++M +R+ +SW ++I+ +QN ++ + + M T
Sbjct: 206 GGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLS 265
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
++ C + + G+ +H +K S++ N L+++Y+ R DA +F + +
Sbjct: 266 ILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPER 325
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------- 250
D+ SW SM+A + + G L AL F EML + N F S +AC +
Sbjct: 326 DLISWNSMLACYVQDGRCLCALKVFAEMLWMKK-EINYVTFTSALAACLDPEFFTNGKIL 384
Query: 251 ------------------------------FARILFNEIDSPDLASWNALIAGVASHSNA 280
A+ +F + D +WNALI G A+++
Sbjct: 385 HGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAEL 444
Query: 281 NEAMSLFSEMRDRELLP-DGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCN 338
NEA++ F MR+ D +T+ ++L +C+ L + G+ +H++ + GFD + V +
Sbjct: 445 NEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQS 504
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
+++TMYAKC L ++ +F +L SV WN+IIAA ++ EE +L RM ++ I+
Sbjct: 505 SLITMYAKCGDLHSSSYIFDQLVFKTSSV-WNAIIAANARYGFGEEALKLVVRMRSAGIE 563
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
D F+ + A +A LE QLH K G D F++N MD+Y KCG L A ++
Sbjct: 564 FDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRI 623
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
+ +SW++LI A+ G +A + F M LGV PN V+ V +L+ACSH GLV
Sbjct: 624 LPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLV 683
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+EGL Y M + YGI P EHC C++DLL R+G + EAE FI +M + +VW+SLLA
Sbjct: 684 DEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLA 743
Query: 579 S 579
S
Sbjct: 744 S 744
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 149/570 (26%), Positives = 265/570 (46%), Gaps = 54/570 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTY--AGLISACSSLRSLQLGRKVHDH 60
N +S + Y EA++ F ++ I I+PS + A L++AC+ S+ H
Sbjct: 27 NHMMSGYVRVGSYVEAVL---FFRDICGIGIKPSGFMIASLVTACNK-SSIMAKEGFQFH 82
Query: 61 ILLSKCQ--PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
KC DV + ++ Y G + +A+ F++MP RNVVSWT+++ S N +
Sbjct: 83 GFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKK 142
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
+ I Y +M G+ + +I +C L + LG QL H +K + + A N+LI
Sbjct: 143 EVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLI 202
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM--LH------ 230
M+ I +A ++F+ + +D SW S+I+A ++ E+ +F+ M +H
Sbjct: 203 FMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYT 262
Query: 231 ---------------------HG-----AYQPNEFIFGSVFSACSNFAR-----ILFNEI 259
HG + N + ++ S S+ R ++F +
Sbjct: 263 TLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRM 322
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
DL SWN+++A A+ +F+EM + + +T S L AC+ G
Sbjct: 323 PERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGK 382
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+H +++ +G + + N ++T Y KC + A VF+ + K D V+WN++I +
Sbjct: 383 ILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPK-LDKVTWNALIGGFANN 441
Query: 380 ---NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFD 435
N+A F+L S + D+IT +++G+C L + +H + TG D
Sbjct: 442 AELNEAVAAFKLMREGSTSGV--DYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLD 499
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
V + L+ +Y KCG L S+ +F+ + W+++I A++G G+EALKL RMRS
Sbjct: 500 QHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRS 559
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
G+ + L+ + + ++EEG L+
Sbjct: 560 AGIEFDQFNFSTALSVAADLAMLEEGQQLH 589
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 135/550 (24%), Positives = 250/550 (45%), Gaps = 59/550 (10%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MY K G + A++ FD+M +RN SW M++G + +A+ + + G+ P F
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 139 FGSIIKACSGLGSVCL-GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
S++ AC+ + G Q H IK + + + Y + + +A+ +F+ +
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG------------------------- 232
++V SW S++ ++S G + E + + M H G
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180
Query: 233 --------------AYQPNEFIF-----GSVFSACSNFARILFNEIDSPDLASWNALIAG 273
N IF G + ACS +FNE++ D SWN++I+
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACS-----IFNEMNERDTISWNSIISA 235
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
A ++ E+ F MR + T+ LL C L G VH +K G +SN
Sbjct: 236 NAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESN 295
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
+ +CN +L++Y+ +A L+F+ + + D +SWNS++A +Q + ++F+ ML
Sbjct: 296 ICLCNTLLSVYSDAGRSKDAELIFRRMPER-DLISWNSMLACYVQDGRCLCALKVFAEML 354
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
+ + +++TF + AC LH ++ GL ++ + N L+ Y KC +
Sbjct: 355 WMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMA 414
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP-NLVTLVGVLTAC 512
A+K+F M D V+W++LI G+A +EA+ F MR S + +T+V +L +C
Sbjct: 415 EAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSC 474
Query: 513 -SHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
+H L++ G +H + ++ G + S ++ + A+ G +H + +Q+
Sbjct: 475 LTHEDLIKYGIPIHAHTVVT---GFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTS 531
Query: 570 IVVWKSLLAS 579
VW +++A+
Sbjct: 532 -SVWNAIIAA 540
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 169/384 (44%), Gaps = 46/384 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++AC G+ +H +++ Q ++++ N ++ YGKC + +A+ F +M
Sbjct: 364 TFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRM 423
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG--QFTFGSIIKAC-SGLGSVC 153
P+ + V+W A+I G + N + N+A+ + ++++ G G T +I+ +C + +
Sbjct: 424 PKLDKVTWNALIGGFANNAELNEAVAAF-KLMREGSTSGVDYITIVNILGSCLTHEDLIK 482
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
G +HAH + + Q++LI MY K + + +F + K + W ++IAA +
Sbjct: 483 YGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANA 542
Query: 214 KLGYELEALC-------------HFN-----------EMLHHG----------AYQPNEF 239
+ G+ EAL FN ML G ++ + F
Sbjct: 543 RYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHF 602
Query: 240 IFGS---VFSACSNFA---RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
I + ++ C RIL D L SWN LI+ A H ++A F +M
Sbjct: 603 IINAAMDMYGKCGELDDALRILPQPTDRSRL-SWNTLISISARHGQFHKAKETFHDMLKL 661
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCN 352
+ P+ ++ LL AC + +G+ ++ + + G + C ++ + + L
Sbjct: 662 GVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVE 721
Query: 353 ALLVFKELGKNADSVSWNSIIAAC 376
A E+ + + W S++A+C
Sbjct: 722 AEAFITEMPIPPNDLVWRSLLASC 745
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 136/305 (44%), Gaps = 15/305 (4%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSL-QLGRKVHDHILLSKCQPDVVLQN 74
NEA+ A+ + + + T ++ +C + L + G +H H +++ D +Q+
Sbjct: 445 NEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQS 504
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
++ MY KCG L + FD++ + W A+IA ++ +A+KL ++M +G+
Sbjct: 505 SLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEF 564
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
QF F + + + L + G+QLH IK NA + MY K + DA +
Sbjct: 565 DQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRIL 624
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---- 250
+ SW ++I+ ++ G +A F++ML G +PN F + SACS+
Sbjct: 625 PQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGV-KPNHVSFVCLLSACSHGGLV 683
Query: 251 ------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
+A + P + +I + EA + +EM + P+ L S
Sbjct: 684 DEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEM---PIPPNDLVWRS 740
Query: 305 LLCAC 309
LL +C
Sbjct: 741 LLASC 745
>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Glycine max]
Length = 828
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 177/581 (30%), Positives = 289/581 (49%), Gaps = 45/581 (7%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y +I A S + L +GRKVH I+ + D V+ +L MYG+ G L DAR FD++
Sbjct: 105 YPSVIKAISVVGGLVVGRKVHGRIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIR 164
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
R++VSW++++A +N + + +++ M+ GV P T S+ +AC +G + L +
Sbjct: 165 VRDLVSWSSVVACYVENGRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKS 224
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H +VI+ E +N+LI MY + + A+ +F ++ W SMI++ ++ G
Sbjct: 225 VHGYVIRKEMAGDASLRNSLIVMYGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGC 284
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR----------ILFNEIDSPDL--- 264
EA+ F +M + N SV C+ IL E+D DL
Sbjct: 285 FEEAIDAFKKM-QESEVEVNAVTMISVLCCCARLGWLKEGKSVHCFILRREMDGADLDLG 343
Query: 265 ----------------------------ASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
SWN LI+ A EAM LF M ++ L+
Sbjct: 344 PALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLISIYAREGLNEEAMVLFVCMLEKGLM 403
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD ++ S + AC G ++ G Q+H ++ K GF ++ V N+++ MY+KC + A +
Sbjct: 404 PDSFSLASSISACAGASSVRFGQQIHGHVTKRGF-ADEFVQNSLMDMYSKCGFVDLAYTI 462
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F ++ + + V+WN +I Q+ + E +LF M + + + +TF + AC+
Sbjct: 463 FDKIWEKS-IVTWNCMICGFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSGY 521
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L +H + +G+ D+++ L+D+Y KCG L +A+ +FN M VVSWS++I
Sbjct: 522 LLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMIAA 581
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y G A LFT+M + PN VT + +L+AC H G VEEG + M +YGI+P
Sbjct: 582 YGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACRHAGSVEEGKFYFNSMR-DYGIVP 640
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
EH + +VDLL+RAG + A + I D +W +LL
Sbjct: 641 NAEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDASIWGALL 681
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 160/588 (27%), Positives = 279/588 (47%), Gaps = 56/588 (9%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y L +CS+LRSL ++H H++++ D + +L Y + GSL +R+ F+ P
Sbjct: 4 YMPLFRSCSTLRSLS---QLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHP 60
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ---FTFGSIIKACSGLGSVCL 154
+ + +I ++ + + LY +Q G Q F + S+IKA S +G + +
Sbjct: 61 SPDSFMFGVLIKCYLWHHLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVV 120
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
GR++H ++K+ G+ + +L+ MY + + DAR VF I +D+ SW S++A + +
Sbjct: 121 GRKVHGRIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVE 180
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------- 251
G E L M+ G P+ SV AC
Sbjct: 181 NGRPREGLEMLRWMVSEGV-GPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDAS 239
Query: 252 -----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
A+ +F + P A W ++I+ + EA+ F +M++ E
Sbjct: 240 LRNSLIVMYGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESE 299
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD-SNVPVCNAILTMYAKCSVL--C 351
+ + +T+ S+LC C L +G VH +I++ D +++ + A++ YA C + C
Sbjct: 300 VEVNAVTMISVLCCCARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSC 359
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
LL L N+ VSWN++I+ + EE LF ML + PD + + AC
Sbjct: 360 EKLLC---LIGNSSVVSWNTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISAC 416
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
A +S+ Q+H ++TK G A D FV N LMD+Y KCG + A +F+ + +V+W+
Sbjct: 417 AGASSVRFGQQIHGHVTKRGFA-DEFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWN 475
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
+I G++Q G EALKLF M + N VT + + ACS+ G + +G ++ +
Sbjct: 476 CMICGFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVS 535
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G+ + +VD+ A+ G + A+ N M + +V W +++A+
Sbjct: 536 -GVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMP-EKSVVSWSAMIAA 581
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/481 (25%), Positives = 219/481 (45%), Gaps = 43/481 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T + AC + L+L + VH +++ + D L+N ++ MYG+C L A+ F+ +
Sbjct: 205 TMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQCSYLRGAKGMFESV 264
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ WT+MI+ C+QN +AI + +M +S V T S++ C+ LG + G+
Sbjct: 265 SDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCCARLGWLKEGK 324
Query: 157 QLHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+H +++ E G+ L AL+ Y +I + I V SW ++I+ +++
Sbjct: 325 SVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLISIYARE 384
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------------- 249
G EA+ F ML G P+ F S SAC+
Sbjct: 385 GLNEEAMVLFVCMLEKG-LMPDSFSLASSISACAGASSVRFGQQIHGHVTKRGFADEFVQ 443
Query: 250 -------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+ A +F++I + +WN +I G + + + EA+ LF EM +
Sbjct: 444 NSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMCFNCMD 503
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
+ +T S + AC L +G +H ++ G ++ + A++ MYAKC L A V
Sbjct: 504 INEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGV 563
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + + + VSW+++IAA H Q LF++M+ S IKP+ +TF +++ AC S
Sbjct: 564 FNSMPEKS-VVSWSAMIAAYGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACRHAGS 622
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM-ENPDVVSWSSLIL 475
+E + G+ + ++D+ + G + A ++ ++ D W +L+
Sbjct: 623 VEEGKFYFNSMRDYGIVPNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDASIWGALLN 682
Query: 476 G 476
G
Sbjct: 683 G 683
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 184/418 (44%), Gaps = 45/418 (10%)
Query: 8 SLCKQN-LYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKC 66
S C QN + EA+ A+ Q + + + T ++ C+ L L+ G+ VH IL +
Sbjct: 277 SSCNQNGCFEEAIDAFKKMQE-SEVEVNAVTMISVLCCCARLGWLKEGKSVHCFILRREM 335
Query: 67 Q-PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
D+ L +++ Y C + + +VVSW +I+ ++ +A+ L++
Sbjct: 336 DGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLISIYAREGLNEEAMVLFV 395
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
ML+ G+MP F+ S I AC+G SV G+Q+H HV K + QN+L+ MY+K
Sbjct: 396 CMLEKGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKRGFADEFV-QNSLMDMYSKCG 454
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A +F I K + +W MI FS+ G +EAL F+EM + NE F S
Sbjct: 455 FVDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMCFN-CMDINEVTFLSAI 513
Query: 246 SACSNFARIL----------------------------------------FNEIDSPDLA 265
ACSN +L FN + +
Sbjct: 514 QACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVV 573
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW+A+IA H A +LF++M + + P+ +T ++L AC ++ +G + +
Sbjct: 574 SWSAMIAAYGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACRHAGSVEEGKFYFNSM 633
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
G N +I+ + ++ + A + K ++ D+ W +++ C H + +
Sbjct: 634 RDYGIVPNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDASIWGALLNGCRIHGRMD 691
>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 923
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 187/608 (30%), Positives = 308/608 (50%), Gaps = 50/608 (8%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
E + Y I + +A ++S C SL G +V H+++S Q V + N +
Sbjct: 127 EEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSL 186
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP-G 135
++M G G + DA F +M +R+ VSW A+++ S + + +++ M + G++
Sbjct: 187 ISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHD 246
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
T S+I C+ V G +H+ +++ S++ NAL+ MY+ ++ DA +F
Sbjct: 247 ATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFW 306
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---- 251
++R+D+ SW +MI+++ + G ++AL ++LH P+ F S ACS+
Sbjct: 307 NMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNE-GPDRMTFSSALGACSSPGALM 365
Query: 252 ------------------------------------ARILFNEIDSPDLASWNALIAGVA 275
A +F + + D+ S N LI A
Sbjct: 366 DGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYA 425
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMGFDSNV 334
+ +AM +F MR E+ + +T+ ++L + L G+ +H+Y I GF S+
Sbjct: 426 VLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDD 485
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V N+++TMYAKC L ++ VF+ + N VSWN++IAA +QH EE +LF M
Sbjct: 486 YVSNSLITMYAKCGDLESSNNVFQRI-INRSVVSWNAMIAANVQHGHGEESLKLFMDMRH 544
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
DHI + M + A +ASLE QLH K GL D V+N MD+Y KCG +
Sbjct: 545 DGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMD- 603
Query: 455 ARKLFNFMENPDVVS---WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
++ + +P + W++LI GYA++G EA + F M S+G +P+ VT V +L+A
Sbjct: 604 --EMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSA 661
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
CSH GLV++G+ Y M + +G+ P +HC C+VD+L R G EAE FI M + +
Sbjct: 662 CSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPNDL 721
Query: 572 VWKSLLAS 579
+W+SLL+S
Sbjct: 722 IWRSLLSS 729
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 227/501 (45%), Gaps = 43/501 (8%)
Query: 39 AGLISACSSLRSLQL-GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
A L++AC + G +H + +V + +L++YG + DA+ F +MP
Sbjct: 47 ASLVTACERWEEGRACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMP 106
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+RNVVSWTA++ S N +A+ Y +M + + F +++ C L G Q
Sbjct: 107 ERNVVSWTALMVALSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQ 166
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+ +HVI S + N+LI+M R+ DA +F + +D SW ++++ +S G
Sbjct: 167 VFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGL 226
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------- 251
++ F++M G + + S+ S C++
Sbjct: 227 CSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVN 286
Query: 252 --------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
A LF + DL SWN +I+ + N +A+ ++ P
Sbjct: 287 ALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGP 346
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D +T S L AC L G VH+ +++ N+ V N+++TMY KC+ + +A +F
Sbjct: 347 DRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIF 406
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+L N D VS N +I + + ++F M ++K ++IT +++G+ L
Sbjct: 407 -QLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDL 465
Query: 418 EMV-TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
LH Y G D +V N L+ +Y KCG L S+ +F + N VVSW+++I
Sbjct: 466 RNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAA 525
Query: 477 YAQFGCGDEALKLFTRMRSLG 497
Q G G+E+LKLF MR G
Sbjct: 526 NVQHGHGEESLKLFMDMRHDG 546
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 141/531 (26%), Positives = 245/531 (46%), Gaps = 53/531 (9%)
Query: 96 MP--QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL--GS 151
MP R SW I+GC + +++ A + M + GV F S++ AC G
Sbjct: 1 MPDDHRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGR 60
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
C G +HA K+ ++ AL+ +Y +LDA+ +F + ++V SW +++ A
Sbjct: 61 AC-GAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVA 119
Query: 212 FSKLGYELEALCHFNEMLHHG-AYQPNEF------------------------------- 239
S G+ EAL ++ M A N F
Sbjct: 120 LSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQ 179
Query: 240 --IFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
+ S+ S N R+ LF ++ D SWNAL++ + +++ +FS+MR
Sbjct: 180 VSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRR 239
Query: 293 RELLP-DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
LL D T+ SL+ C + G VHS ++ G S +PV NA++ MY+ L
Sbjct: 240 GGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLA 299
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A +F + + D +SWN++I++ +Q+ + + ++L + PD +TF+ +GAC
Sbjct: 300 DAEFLFWNMSRR-DLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGAC 358
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ +L +H + L ++ V N L+ +Y KC S+ A ++F M N DVVS +
Sbjct: 359 SSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCN 418
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA-CSHVGLVEEG--LHLYRIM 528
LI YA G +A+++F MR V N +T+V +L + S L G LH Y I
Sbjct: 419 ILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTI- 477
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G + + ++ + A+ G + E+ + + Q + +V W +++A+
Sbjct: 478 --HAGFLSDDYVSNSLITMYAKCGDL-ESSNNVFQRIINRSVVSWNAMIAA 525
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/514 (24%), Positives = 227/514 (44%), Gaps = 43/514 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS + L +++ + + +R +T LIS C+S + G VH L
Sbjct: 215 NALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCL 274
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + + N ++NMY G L DA F M +R+++SW MI+ QN DA+K
Sbjct: 275 RTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALK 334
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
Q+L + P + TF S + ACS G++ GR +HA ++ +L+ N+LI MY
Sbjct: 335 TLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYG 394
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM-------------- 228
K + I DA +F + DV S +I +++ L +A+ F M
Sbjct: 395 KCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVN 454
Query: 229 -----------------LH----HGAYQPNEFIFGSV---FSACSNF--ARILFNEIDSP 262
LH H + ++++ S+ ++ C + + +F I +
Sbjct: 455 ILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINR 514
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+ SWNA+IA H + E++ LF +MR D + + + + +L +GMQ+H
Sbjct: 515 SVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLH 574
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+K G ++ V NA + MY KC + L + + WN++I+ ++
Sbjct: 575 GLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQC-WNTLISGYARYGYF 633
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNG 441
+E F M++ PD++TF ++ AC+ ++ + ++ G++ +
Sbjct: 634 KEAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVC 693
Query: 442 LMDIYIKCGSLGSARKLFNFMEN-PDVVSWSSLI 474
++DI + G A K M P+ + W SL+
Sbjct: 694 IVDILGRLGRFAEAEKFIEDMPVLPNDLIWRSLL 727
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/581 (27%), Positives = 294/581 (50%), Gaps = 45/581 (7%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A L+ C+S++ L ++ ++ + + + Q +++++ K GS+ +A F+ +
Sbjct: 53 AVLLELCTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDD 109
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+ + M+ G ++N A+ +M V P + F ++K C + G+++
Sbjct: 110 KLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEI 169
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H +I + +++ A ++ MY K +I DA +F + +D+ SW ++IA FS+ G+
Sbjct: 170 HGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFA 229
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------------- 251
+AL M G +P+ +V A ++
Sbjct: 230 KKALELVLRMQDEGQ-RPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTA 288
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
AR++F+ +D + SWN+++ G + +A+++F +M + + P
Sbjct: 289 LADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPT 348
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
G+T+ L AC L +G VH ++ ++ S++ V N++++MY+KC + A +F
Sbjct: 349 GVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFN 408
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
L VSWN++I Q+ + E FS M + +KPD T V+ A A+++
Sbjct: 409 NLNGRT-HVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTR 467
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
+H I ++ L ++FV L+D+Y KCG++ ARKLF+ + + V++W+++I GY
Sbjct: 468 HAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYG 527
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
G G AL LF +M+ V PN +T + V++ACSH GLV+EGL ++ M+ +YG+ P+
Sbjct: 528 THGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSM 587
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H +VDLL RAG + EA DFI M I V+ ++L +
Sbjct: 588 DHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGA 628
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 221/474 (46%), Gaps = 46/474 (9%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++P Y L+ C L+ G+++H ++ + +V ++NMY KC ++DA
Sbjct: 143 VKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAY 202
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+MP+R++VSW +IAG SQN A++L ++M G P T +++ A + +G
Sbjct: 203 KMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVG 262
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ +G+ +H + I++ + AL MY+K + AR +F G+ +K V SW SM+
Sbjct: 263 LLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMD 322
Query: 211 AFSKLGYELEALCHFNEMLHHGA-------------------YQPNEFIFG--------- 242
+ + G +A+ F +ML G + +F+
Sbjct: 323 GYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGS 382
Query: 243 ---------SVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
S++S C + A +FN ++ SWNA+I G A + +EA++ FSEM+
Sbjct: 383 DISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMK 442
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ PD T+ S++ A +H II+ D N+ V A++ MY+KC +
Sbjct: 443 SLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIH 502
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A +F ++ + ++WN++I H LF +M ++P+ IT+ V+ AC
Sbjct: 503 MARKLF-DMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISAC 561
Query: 412 AKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
+ + E + GL + ++D+ G G ++ ++F+EN
Sbjct: 562 SHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDL---LGRAGRIKEAWDFIEN 612
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 143/302 (47%), Gaps = 18/302 (5%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+ AC+ L L+ G+ VH + D+ + N +++MY KC ++ A F+ + R
Sbjct: 356 LHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTH 415
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
VSW AMI G +QN + ++A+ + +M G+ P FT S+I A + L + +H
Sbjct: 416 VSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGL 475
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
+I+S ++ AL+ MY+K I AR +F I+ + V +W +MI + G A
Sbjct: 476 IIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAA 535
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACS----------NFARILFNEIDSPDLASWNALI 271
L F++M GA +PN+ + SV SACS +F + + P + + A++
Sbjct: 536 LDLFDKM-KKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMV 594
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
+ EA M + G+TV+ A +G +++ ++V K F+
Sbjct: 595 DLLGRAGRIKEAWDFIENMP----ISPGITVYG---AMLGACKIHKNIEVGEKAAKKLFE 647
Query: 332 SN 333
N
Sbjct: 648 LN 649
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 6/184 (3%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++P ++ +I A + L + + +H I+ S ++ + +++MY KCG++ AR
Sbjct: 446 MKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMAR 505
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD + R+V++W AMI G + A+ L+ +M + V P T+ S+I ACS G
Sbjct: 506 KLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSG 565
Query: 151 SVCLGRQLHAHVIKSEHG--SHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGS 207
V G + H +K ++G + A++ + + RI +A + + +T +G+
Sbjct: 566 LVDEGLR-HFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGA 624
Query: 208 MIAA 211
M+ A
Sbjct: 625 MLGA 628
>gi|218190567|gb|EEC72994.1| hypothetical protein OsI_06907 [Oryza sativa Indica Group]
Length = 711
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 173/590 (29%), Positives = 286/590 (48%), Gaps = 49/590 (8%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S A +S+C+ + G ++H ++ C V + + ++ +Y +C LE + + F
Sbjct: 14 SILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQT 73
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP +N VSWTAMI+G + + + + L+ M+ S P TF ++ C+ + LG
Sbjct: 74 MPTKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDITFATLFSVCTKHALLALG 133
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R +HA ++ S++ NAL++MY K I +A+ +F IA KD+ SW ++I S+
Sbjct: 134 RSVHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKDLVSWNAIIFGCSQY 193
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARILFNEIDS---- 261
L EM P+ F V S+C + F ++ + I
Sbjct: 194 VLAKHCLDLLKEM-ERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPGLDH 252
Query: 262 ---------------------------PDLASWNALIAGVASHSNANEAMS-----LFSE 289
P+ W +L+ H N + + L E
Sbjct: 253 YSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLE 312
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
E D + + + +C R QG Q+H ++K+G DS V + ++++T+Y++CS
Sbjct: 313 PGKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQ 372
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L ++ LVF+ + ++VSW ++I+ HN+ E LF+ M S KP+ ITF +
Sbjct: 373 LESSYLVFQTM-PTKNTVSWTAMISGFALHNRVEPCLHLFASMRLSSCKPNDITFATLFS 431
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
C A L + +H + G V V N L+ +Y KCG + A+ +F F+ D+VS
Sbjct: 432 VCTNHALLALGKSVHALQMRMGFHSYVHVSNALLSMYAKCGCIDEAQSIFGFIACKDLVS 491
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+++I G +Q+G L L M + P+ ++ +GVL++C H LVEEG H ++ M
Sbjct: 492 WNAMIFGCSQYGLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTM- 550
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
E+GI P +H SC+VDLL RAG + EA D I M+ + V+W SLL S
Sbjct: 551 IEHGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGS 600
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 163/289 (56%), Gaps = 2/289 (0%)
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
R E D + + + +C R QG Q+H ++K+G DS V + ++++T+Y++CS L
Sbjct: 5 RKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQL 64
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
++ LVF+ + ++VSW ++I+ HN+ E LF+ M+ S KP+ ITF +
Sbjct: 65 ESSYLVFQTM-PTKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDITFATLFSV 123
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
C K A L + +H + G V V N L+ +Y KCG + A+ +F + D+VSW
Sbjct: 124 CTKHALLALGRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKDLVSW 183
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
+++I G +Q+ L L M + P+ ++ +GVL++C H LVEEG H ++ M
Sbjct: 184 NAIIFGCSQYVLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTM-I 242
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
E+GI P +H SC+VDLL RAG + EA D I M+ + V+W SLL S
Sbjct: 243 EHGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGS 291
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/488 (22%), Positives = 207/488 (42%), Gaps = 50/488 (10%)
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
Q + + +C+ G QLH ++K S + ++LI +Y++ ++ + VF
Sbjct: 13 QSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQ 72
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---- 251
+ K+ SW +MI+ F+ L +E H + + +PN+ F ++FS C+
Sbjct: 73 TMPTKNTVSWTAMISGFA-LHNRVEPCLHLFASMMLSSCKPNDITFATLFSVCTKHALLA 131
Query: 252 ------------------------------------ARILFNEIDSPDLASWNALIAGVA 275
A+ +F I DL SWNA+I G +
Sbjct: 132 LGRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKDLVSWNAIIFGCS 191
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
+ A + L EM + ++PD L+ +L +C + +G +I+ G +
Sbjct: 192 QYVLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPGLD 251
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN------QAEELFRLF 389
+ ++ + + +L A + + + ++V W S++ +C H QA E RL
Sbjct: 252 HYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAE-HRLK 310
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
+ D M +CA TQLH + K G VF+ + L+ +Y +C
Sbjct: 311 LEPGKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRC 370
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
L S+ +F M + VSW+++I G+A + L LF MR PN +T +
Sbjct: 371 SQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMRLSSCKPNDITFATLF 430
Query: 510 TACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
+ C++ L+ G ++ ++ G + ++ + A+ GC+ EA+ +AC D
Sbjct: 431 SVCTNHALLALGKSVH-ALQMRMGFHSYVHVSNALLSMYAKCGCIDEAQSIFGFIACK-D 488
Query: 570 IVVWKSLL 577
+V W +++
Sbjct: 489 LVSWNAMI 496
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 141/303 (46%), Gaps = 15/303 (4%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S A +S+C+ + G ++H ++ C V + + ++ +Y +C LE + + F
Sbjct: 323 SILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQT 382
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP +N VSWTAMI+G + + + + L+ M S P TF ++ C+ + LG
Sbjct: 383 MPTKNTVSWTAMISGFALHNRVEPCLHLFASMRLSSCKPNDITFATLFSVCTNHALLALG 442
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ +HA ++ S++ NAL++MY K I +A+++F IA KD+ SW +MI S+
Sbjct: 443 KSVHALQMRMGFHSYVHVSNALLSMYAKCGCIDEAQSIFGFIACKDLVSWNAMIFGCSQY 502
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARILFNEIDSPDLA 265
G L EM P+ F V S+C + F ++ + I P L
Sbjct: 503 GLAKHCLDLLKEM-ERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIK-PGLD 560
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
++ ++ + EA L M + P+ + SLL +C + G+Q +
Sbjct: 561 HYSCMVDLLGRAGLLEEAWDLIQTM---SIPPNAVIWGSLLGSCRVHGNISIGIQAAEHR 617
Query: 326 IKM 328
+K+
Sbjct: 618 LKL 620
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/392 (20%), Positives = 164/392 (41%), Gaps = 51/392 (13%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++ G++S+C R ++ GR ++ +P + + ++++ G+ G LE+A M
Sbjct: 217 SFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTM 276
Query: 97 P-QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG-------QFTFGSIIKACSG 148
N V W +++ C N +I + + + PG Q + + +C+
Sbjct: 277 SIPPNAVIWGSLLGSC--RVHGNISIGIQAAEHRLKLEPGKGETSTDQSILAAAMSSCAD 334
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
G QLH ++K S + ++LI +Y++ ++ + VF + K+ SW +M
Sbjct: 335 RQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQTMPTKNTVSWTAM 394
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------- 254
I+ F+ L +E H + + +PN+ F ++FS C+N A +
Sbjct: 395 ISGFA-LHNRVEPCLHLFASMRLSSCKPNDITFATLFSVCTNHALLALGKSVHALQMRMG 453
Query: 255 --------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
+F I DL SWNA+I G + + A + L
Sbjct: 454 FHSYVHVSNALLSMYAKCGCIDEAQSIFGFIACKDLVSWNAMIFGCSQYGLAKHCLDLLK 513
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
EM + ++PD L+ +L +C + +G +I+ G + + ++ + +
Sbjct: 514 EMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPGLDHYSCMVDLLGRAG 573
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+L A + + + ++V W S++ +C H
Sbjct: 574 LLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHG 605
>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Vitis vinifera]
Length = 748
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 166/544 (30%), Positives = 285/544 (52%), Gaps = 33/544 (6%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
+ L+S+C+ ++SL GR++H HI+ + +L ++ Y L DA + +
Sbjct: 104 SSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNI 163
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+ W +I+ +N A+ Y QM++ G+ P FT+ S++KAC + G+++
Sbjct: 164 LHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEV 223
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H + S LI NALI+MY K ++ AR++F I +D SW SMI+ ++ +G
Sbjct: 224 HESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGM- 282
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHS 278
+NE +FGS+++ I+ WN + G
Sbjct: 283 ------WNEAFE---------LFGSMWAEDIELNIII-----------WNTIAGGYLRTG 316
Query: 279 NANEAMSLFSEMRD--RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
N A+ L S+MR L L + C+ IG L G ++HS+ I+ F V
Sbjct: 317 NYKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKL--GKEIHSFAIRSCFGEVDTV 374
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
NA++TMY++C L +A L+F +L + ++WNSII+ C +++EE L ML
Sbjct: 375 KNALITMYSRCKDLKHAYLLF-QLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFG 433
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD-VFVMNGLMDIYIKCGSLGSA 455
I+P+++T V+ CA++A+L+ + HCY+T+ D + + N L+D+Y + G + A
Sbjct: 434 IEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEA 493
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
R++F+ + D ++++S+I GY G G ALKLF M + + P+ +T++ VL+ACSH
Sbjct: 494 RRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHS 553
Query: 516 GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
GLV +G L+ M + YG+ P EH +C+ DL RAG +++A++ I M +W +
Sbjct: 554 GLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWAT 613
Query: 576 LLAS 579
L+ +
Sbjct: 614 LIGA 617
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 163/525 (31%), Positives = 278/525 (52%), Gaps = 49/525 (9%)
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP++NVV+WT++++G ++N + A+ ++ M++SGV P F + + AC+ LG++ G
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
Q+H+ +++ + LI MY++ + A+ VF + DV + S+I+AF +
Sbjct: 61 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120
Query: 216 G-YEL--EALCHFNEMLHHGAYQPNEFIFGSVFSACS----------------------- 249
G +EL EAL +ML G +PNE ++ +AC
Sbjct: 121 GEFELAAEALI---QMLKQG-LKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVY 176
Query: 250 ---------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
A+ +F+ + ++ SW +++ EA+ +F +M
Sbjct: 177 SSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEG 236
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ P+ + +L AC G + L G Q+H IK +++ V NA+L+MY + ++
Sbjct: 237 VDPNEFALSIVLGAC-GSIGL--GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELE 293
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+ ++ +N D VSW + I+A Q+ E+ L +M + P+ F+ V+ +CA +
Sbjct: 294 AMLNKI-ENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADV 352
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
ASL+ Q HC K G ++ N L+++Y KCG +GSAR F+ M DV SW+SLI
Sbjct: 353 ASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLI 412
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
G+AQ G ++AL++F++MRS G+ P+ T +GVL C+H G+VEEG +R+M ++Y
Sbjct: 413 HGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSF 472
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P H +C++D+L R G EA IN M + D ++WK+LLAS
Sbjct: 473 TPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLAS 517
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 230/492 (46%), Gaps = 63/492 (12%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ P+ +A + AC+ L +L+ G +VH + + D + + ++ MY +CGSL A+
Sbjct: 37 VAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAK 96
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+M +VV +T++I+ +N + A + IQML+ G+ P + T +I+ AC +
Sbjct: 97 EVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV- 155
Query: 151 SVCLGRQLHAHVIKS--EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
LG+Q+H ++IK + + ALI Y++ A+ VF + K+V SW SM
Sbjct: 156 ---LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSM 212
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-------------------- 248
+ + + G EAL F +M+ G PNEF V AC
Sbjct: 213 MQLYIRDGRLEEALQVFGDMISEGV-DPNEFALSIVLGACGSIGLGRQLHCSAIKHDLIT 271
Query: 249 ---------SNFARI--------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
S + R + N+I++PDL SW I+ + +A++L +M
Sbjct: 272 DIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMH 331
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
P+G S+L +C +L QGMQ H +K+G DS + NA++ MY+KC +
Sbjct: 332 SEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMG 391
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A L F ++ D SWNS+I QH A + +FS+M ++ IKPD TF V+ C
Sbjct: 392 SARLAF-DVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGC 450
Query: 412 AKMASLE--------MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
+E M+ Q + A ++D+ + G A ++ N M
Sbjct: 451 NHSGMVEEGELFFRLMIDQYSFTPAPSHYAC-------MIDMLGRNGRFDEALRMINDMP 503
Query: 464 -NPDVVSWSSLI 474
PD + W +L+
Sbjct: 504 FEPDALIWKTLL 515
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 147/298 (49%), Gaps = 24/298 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++ AC S+ LGR++H + D+ + N +L+MYG+ G +E+ +K+ +
Sbjct: 247 VLGACGSI---GLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPD 303
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+VSWT I+ QN AI L QM G P + F S++ +C+ + S+ G Q H
Sbjct: 304 LVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHC 363
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+K S + NALI MY+K ++ AR F + DVTSW S+I ++ G +
Sbjct: 364 LALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANK 423
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNEID-SPDLASWNAL 270
AL F++M +G +P++ F V C++ F R++ ++ +P + + +
Sbjct: 424 ALEVFSKMRSNG-IKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACM 482
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC-------IGRLTLYQGMQV 321
I + + +EA+ + ++M PD L +LL +C IG+L + M++
Sbjct: 483 IDMLGRNGRFDEALRMINDM---PFEPDALIWKTLLASCKLHRNLDIGKLAADRLMEL 537
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 6/204 (2%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN + E +A ++ ++ ++S+C+ + SL G + H L C ++
Sbjct: 316 QNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEIC 375
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
N ++NMY KCG + AR+ FD M +V SW ++I G +Q+ N A++++ +M +G
Sbjct: 376 TGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNG 435
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK----SEHGSHLIAQNALIAMYTKFDRI 187
+ P TF ++ C+ G V G +I + SH ++ +FD
Sbjct: 436 IKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEA 495
Query: 188 LDARNVFSGIARKDVTSWGSMIAA 211
L R + D W +++A+
Sbjct: 496 L--RMINDMPFEPDALIWKTLLAS 517
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 167/501 (33%), Positives = 270/501 (53%), Gaps = 31/501 (6%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
+Y L D+ F+ + ++W ++I + + + ++ +I ML SG+ P
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
F S++K+C+ L + LG LH ++I+ L NAL+ MY+K R L+ SG
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKL-RFLEE----SGRQ 163
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE 258
R L A F+EM + SV S S R +F
Sbjct: 164 R-------------------LGAGEVFDEMTE----RTRSVRTVSVLSEDS--VRKIFEM 198
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ DL SWN +IAG A + E + + EM L PD T+ S+L + + +G
Sbjct: 199 MPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRG 258
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
++H I+ G D+++ V ++++ MYAKC+ + ++ VF L + D +SWNSIIA C+Q
Sbjct: 259 KEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTER-DGISWNSIIAGCVQ 317
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+ +E R F +ML ++IKP +F+ +M ACA + +L + QLH YIT+ G ++F+
Sbjct: 318 NGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFI 377
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
+ L+D+Y KCG++ +A+++F+ M D+VSW+++I+G A G +A++LF +M + G+
Sbjct: 378 ASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGI 437
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAE 558
PN V + VLTACSH GLV+E + M ++GI P EH + V DLL RAG + EA
Sbjct: 438 KPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAY 497
Query: 559 DFINQMACDADIVVWKSLLAS 579
DFI M +W +LL++
Sbjct: 498 DFICGMHIGPTGSIWATLLSA 518
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 129/248 (52%), Gaps = 2/248 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + LY E L N++ T + ++ + + G+++H +
Sbjct: 208 NTIIAGNARNGLYEETLRMIR-EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSI 266
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
D+ + + +++MY KC + D+ F + +R+ +SW ++IAGC QN ++ ++
Sbjct: 267 RQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLR 326
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ QML + + P ++F SI+ AC+ L ++ LG+QLH ++ ++ ++ ++L+ MY
Sbjct: 327 FFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYA 386
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I A+ +F + +D+ SW +MI + G +A+ F +M G +PN F
Sbjct: 387 KCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEG-IKPNHVAFM 445
Query: 243 SVFSACSN 250
+V +ACS+
Sbjct: 446 AVLTACSH 453
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 182/439 (41%), Gaps = 76/439 (17%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA---RMG 92
+ + ++ +C+ L L LG +H +I+ D+ N ++NMY K LE++ R+G
Sbjct: 107 NVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLG 166
Query: 93 -----------------------------FDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
F+ MP++++VSW +IAG ++N + +++
Sbjct: 167 AGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRM 226
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+M + + P FT S++ + + G+++H I+ + + ++LI MY K
Sbjct: 227 IREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAK 286
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
R+ D+ VF+ + +D SW S+IA + G E L F +ML +P + F S
Sbjct: 287 CTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQML-MAKIKPKSYSFSS 345
Query: 244 VFSACSNF----------------------------------------ARILFNEIDSPD 263
+ AC++ A+ +F+ + D
Sbjct: 346 IMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRD 405
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI-GRLTLYQGMQVH 322
+ SW A+I G A H A +A+ LF +M + P+ + ++L AC G L +
Sbjct: 406 MVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFN 465
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
S G V A+ + + L A + W ++++AC H
Sbjct: 466 SMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNI 525
Query: 383 EELFRLFSRMLASQIKPDH 401
+ ++ +R+L ++ P++
Sbjct: 526 DMAEKVANRIL--EVDPNN 542
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
Query: 10 CKQN-LYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKC 66
C QN L++E L F + +I+P +Y+ ++ AC+ L +L LG+++H +I +
Sbjct: 315 CVQNGLFDEGL---RFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGF 371
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
++ + + +++MY KCG++ A+ FD+M R++VSWTAMI GC+ + Q DAI+L+ Q
Sbjct: 372 DENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQ 431
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSV 152
M G+ P F +++ ACS G V
Sbjct: 432 METEGIKPNHVAFMAVLTACSHGGLV 457
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 132/300 (44%), Gaps = 48/300 (16%)
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
Q Q+H+ ++K S + +L++Y+ ++L ++L +F + +++W S+I
Sbjct: 24 QAQQLHAQVLKFQASSLC-NLSLLLSIYSHINLLHDSLRLFNTI-HFPPALAWKSVIRCY 81
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
H + F MLAS + PDH F V+ +CA + L + LH YI + GL FD+
Sbjct: 82 TSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDL 141
Query: 437 FVMNGLMDIYIKCGSL--------------------------------GSARKLFNFMEN 464
+ N LM++Y K L S RK+F M
Sbjct: 142 YTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPE 201
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
D+VSW+++I G A+ G +E L++ M + P+ TL VL L+ E + +
Sbjct: 202 KDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLP------LIAENVDI 255
Query: 525 YRIME-----NEYGIIPTREHCSCVVDLLARAGCVHEAED-FINQMACDADIVVWKSLLA 578
R E G+ S ++D+ A+ C A+ + + + D + W S++A
Sbjct: 256 SRGKEIHGCSIRQGLDADIYVASSLIDMYAK--CTRVADSCRVFTLLTERDGISWNSIIA 313
>gi|302801269|ref|XP_002982391.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
gi|300149983|gb|EFJ16636.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
Length = 779
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 171/591 (28%), Positives = 297/591 (50%), Gaps = 53/591 (8%)
Query: 33 IRPSTYAGLISACSSLRSLQL--GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IRP+ LI+ + LR+ L GR+VH ++L + D L N +++MY K G +++A
Sbjct: 157 IRPN----LITMVAVLRACNLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEAD 212
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ +MP+R+V+SW MI+G +Q+ + ++ +M Q G+ P + T+ +++ ACS
Sbjct: 213 VVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEE 272
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ G+ +H V+ + ++ L+ MY K + D + + ++ +W ++I
Sbjct: 273 DLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIG 332
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------- 249
A+++ +AL F +M G + + F + CS
Sbjct: 333 AYARYSDHFQALRSFQQMQLEGV-KADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFE 391
Query: 250 ------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
+ AR +F E+ S + SWN+L++ H +A F M+
Sbjct: 392 SIIVHNSLTAMYAKCGSLDAARKMFEEMPSRNSVSWNSLMSAAIQHGCHADAHKFFQRMK 451
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
PD +T S+L AC + +G +H +++ GFD V NA++ MYAK
Sbjct: 452 LEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHE 511
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A VF + + ++VSWN+I+AA ++ + +F +M + D +T+ + AC
Sbjct: 512 AARNVFDAMAER-NTVSWNTILAAYVEKGLNRDAVEMFWKM---DVARDKVTYVAALDAC 567
Query: 412 AKMAS-LEMVTQLHCYITKTGLA--FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
+ +A L +H Y+ G + D L+++Y KCGSL ARK+F+ M + DVV
Sbjct: 568 SGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDGMLHRDVV 627
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
+W+SLI+ YAQ ++ALKL M GV + V + +L+ C H GL+EEG + M
Sbjct: 628 TWTSLIVAYAQHSEIEQALKLVKIMEQEGVKVDDVVFLSILSGCDHSGLLEEGCKYFVSM 687
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++YGI P EH +C++D+L RAG + AE ++++ +D VW +LLA+
Sbjct: 688 IDDYGISPRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVWMTLLAA 738
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 167/612 (27%), Positives = 298/612 (48%), Gaps = 56/612 (9%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
N N+A+ A + + +RP T+ + AC+ +L GRKVH HI + D+
Sbjct: 35 NSENDAVQALELYKRMQLEGVRPDSVTFVTCLKACTVEGALGDGRKVHAHIRELGLETDI 94
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ-NYQENDAIKLYIQMLQ 129
N ++NMYGKC S EDA F +M NVVSWT++I +Q + +++ L+ +M
Sbjct: 95 YAANALINMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMEL 154
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD 189
G+ P T ++++AC ++ GRQ+H +V+++ NAL+ MY K + +
Sbjct: 155 EGIRPNLITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDE 210
Query: 190 ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
A V + ++DV SW MI+ +++ G E L M G P + + ++ +ACS
Sbjct: 211 ADVVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDG-LSPTKVTYATLLNACS 269
Query: 250 ---------NFARILFN-------------------------------EIDSPDLASWNA 269
+ R + + E+ + +WN
Sbjct: 270 SEEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNT 329
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
+I A +S+ +A+ F +M+ + D +T +L C L QG+ +H +I ++G
Sbjct: 330 IIGAYARYSDHFQALRSFQQMQLEGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLG 389
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
F+S + V N++ MYAKC L A +F+E+ + +SVSWNS+++A +QH + + F
Sbjct: 390 FES-IIVHNSLTAMYAKCGSLDAARKMFEEM-PSRNSVSWNSLMSAAIQHGCHADAHKFF 447
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
RM +PD +T ++ AC K A+ + + +H + ++G V N L+ +Y K
Sbjct: 448 QRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKL 507
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
G +AR +F+ M + VSW++++ Y + G +A+++F +M V+ + VT V L
Sbjct: 508 GDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKM---DVARDKVTYVAAL 564
Query: 510 TACSHV--GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
ACS + GL L ++++ + + +V++ + G + EA + M
Sbjct: 565 DACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDGM-LH 623
Query: 568 ADIVVWKSLLAS 579
D+V W SL+ +
Sbjct: 624 RDVVTWTSLIVA 635
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 162/541 (29%), Positives = 268/541 (49%), Gaps = 47/541 (8%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK---LYIQMLQSGVMPG 135
MYGKCG L+ A F K+ +V +W+A++ + + ENDA++ LY +M GV P
Sbjct: 1 MYGKCGDLDAASEVFGKLDPLHVAAWSALLGAYANS--ENDAVQALELYKRMQLEGVRPD 58
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
TF + +KAC+ G++ GR++HAH+ + + + A NALI MY K DA +FS
Sbjct: 59 SVTFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFS 118
Query: 196 GIARKDVTSWGSMIAAFSKLGY-ELEALCHFNEMLHHGAYQPNEFIFGSVFSACS----- 249
+ +V SW S+I F++ G+ E++ F +M G +PN +V AC+
Sbjct: 119 RMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEG-IRPNLITMVAVLRACNLTDGR 177
Query: 250 -------------------------------NFARILFNEIDSPDLASWNALIAGVASHS 278
+ A ++ E+ D+ SWN +I+G A
Sbjct: 178 QVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQSG 237
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
+ E + M+ L P +T +LL AC L +G +H ++ MG D + V +
Sbjct: 238 DCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEVVKS 297
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
+L MY KC L + E+ + ++++WN+II A +++ + R F +M +K
Sbjct: 298 FLLGMYGKCGSLEDVKRSSCEVHER-NTIAWNTIIGAYARYSDHFQALRSFQQMQLEGVK 356
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
D +TF ++G C+ A L LH +I++ G + V N L +Y KCGSL +ARK+
Sbjct: 357 ADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFE-SIIVHNSLTAMYAKCGSLDAARKM 415
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
F M + + VSW+SL+ Q GC +A K F RM+ G P+ VT + +L AC+
Sbjct: 416 FEEMPSRNSVSWNSLMSAAIQHGCHADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANA 475
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+EG +++ M E G + ++ + A+ G A + + MA + + V W ++LA
Sbjct: 476 KEGSSIHQ-MVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMA-ERNTVSWNTILA 533
Query: 579 S 579
+
Sbjct: 534 A 534
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 173/402 (43%), Gaps = 41/402 (10%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++ T+ ++ CSS L G +HD I + +++ N + MY KCGSL+ AR
Sbjct: 355 VKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFES-IIVHNSLTAMYAKCGSLDAAR 413
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F++MP RN VSW ++++ Q+ DA K + +M G P + T S++ AC+
Sbjct: 414 KMFEEMPSRNSVSWNSLMSAAIQHGCHADAHKFFQRMKLEGSRPDEVTCISMLDACTKQA 473
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ G +H V++S NALI MY K ARNVF +A ++ SW +++A
Sbjct: 474 NAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILA 533
Query: 211 AFSKLGYELEALCHFNEM---------------------------------LHHGAYQPN 237
A+ + G +A+ F +M L HG
Sbjct: 534 AYVEKGLNRDAVEMFWKMDVARDKVTYVAALDACSGLAGGLAHGKLIHGYMLDHGFSNRL 593
Query: 238 EFIFGS----VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
+ + + ++ C + AR +F+ + D+ +W +LI A HS +A+ L M
Sbjct: 594 DTVAATALVNMYGKCGSLQEARKIFDGMLHRDVVTWTSLIVAYAQHSEIEQALKLVKIME 653
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVH-SYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ D + S+L C L +G + S I G + N I+ + + L
Sbjct: 654 QEGVKVDDVVFLSILSGCDHSGLLEEGCKYFVSMIDDYGISPRLEHYNCIIDVLGRAGHL 713
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
A + L +DS W +++AAC H E R R+
Sbjct: 714 DLAEKLVDRLPSRSDSKVWMTLLAACRMHGNPERGKRAARRI 755
>gi|147769567|emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
Length = 609
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 175/522 (33%), Positives = 267/522 (51%), Gaps = 44/522 (8%)
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
V W + I + A+ L+ QM Q+G+ P TF S+ KACS L ++ + +H
Sbjct: 18 TVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVH 77
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
HV+KS + L Q +++ MY K ++ A N+FS + +DV SW SMI F++LG+
Sbjct: 78 THVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFVD 137
Query: 220 EALCHFNEM--------------LHHGAYQPNEFI-------FG---------------- 242
+ F EM L H A + FG
Sbjct: 138 RVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWI 197
Query: 243 SVFSACSNF--ARILFNEIDS--PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
+ ++ C F A +F+ ID SWN++IAG A ++A+ F +M D
Sbjct: 198 AAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFRAD 257
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
T+ SLL +C+ L+ G +H++ I++G DS++ V N +++MY+KC + +A +F
Sbjct: 258 LSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFD 317
Query: 359 E-LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
LGK VSW ++IA + +E LFS M A KPD +T +M C + +L
Sbjct: 318 NMLGKT--RVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGAL 375
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
E+ + Y T GL ++ V N L+D+Y KCGS+ +AR+LF M +VSW++LI G
Sbjct: 376 ELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGC 435
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
A G EAL LF +M LG+ PN +T + VL AC+H G +E+G + +M Y I P
Sbjct: 436 ALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPG 495
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H SC+ DLL R G + EA +FI M D+ +W LL++
Sbjct: 496 LDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSA 537
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 151/524 (28%), Positives = 239/524 (45%), Gaps = 63/524 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N ++ Q ++AL+ + + N + P+ T+ + ACS L +L+ + VH H
Sbjct: 23 NSSITESVNQGYAHKALLLFRQMKQNG---LEPNNLTFPSVAKACSKLLNLKYSQIVHTH 79
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
++ S+ Q D+ +Q +++MY KC L A F +MP R+V SW +MI G +Q +
Sbjct: 80 VVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFVDRV 139
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ L+ +M G+ T + + L + + +H+ IK + + N IA
Sbjct: 140 VSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAA 199
Query: 181 YTKFDRILDARNVFSGIAR--KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG------ 232
Y K A VF GI + K SW SMIA ++ +A+ F +ML G
Sbjct: 200 YAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFRADLS 259
Query: 233 --------AYQPNEFIFG-----------------------SVFSACSNF--ARILFNEI 259
QP G S++S C + AR LF+ +
Sbjct: 260 TILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNM 319
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
SW A+IAG A + +EAM+LFS M PD +T+ SL+ C L G
Sbjct: 320 LGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGK 379
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+ +Y G N+ VCNA++ +YAKC + NA +F + + + VSW ++IA C +
Sbjct: 380 WIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKS-LVSWTTLIAGCALN 438
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+ +E LF +M+ +KP+HITF V+ AC LE + +TK V+ +
Sbjct: 439 GEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTK------VYKI 492
Query: 440 NGLMDIYIKC-----GSLGSARKLFNFMEN----PDVVSWSSLI 474
N +D Y C G G ++ F F++N PDV WS L+
Sbjct: 493 NPGLDHY-SCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLL 535
>gi|302803813|ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
gi|300148496|gb|EFJ15155.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
Length = 917
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 178/604 (29%), Positives = 305/604 (50%), Gaps = 49/604 (8%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
EAL + Q I T+ +++ACSS +L G +H+ IL +++ N I
Sbjct: 288 EALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCI 347
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
+ MY CG +++A F M +R+ +SW +I+G +Q ++A+ L+ +ML G+ P +
Sbjct: 348 MTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDK 407
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG 196
FTF SII + + + +L +++S + +ALI M++++ + +AR++F
Sbjct: 408 FTFISIIDGTARMQEAKILSEL---MVESGVELDVFLVSALINMHSRYGNVREARSLFDD 464
Query: 197 IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-- 254
+ +D+ W S+I+++ + G +AL M G N+F + +AC++ +
Sbjct: 465 MKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEG-LMGNDFTLVTALNACASLTALSE 523
Query: 255 ----------------------LFN---------EID------SPDLASWNALIAGVASH 277
L N E D +L SWN + A
Sbjct: 524 GKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRVFHQCGKNLVSWNTIAAAYVQR 583
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
EA+ LF EM+ L D ++ ++L C + +G ++H+ +++ G +S+ V
Sbjct: 584 DKWREALQLFQEMQLEGLKADKVSFVTVLNGCS---SASEGRKIHNILLETGMESDHIVS 640
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
A+L MY L A +F + + D VSWN++IA +H + E ++F RM +
Sbjct: 641 TALLNMYTASKSLDEASRIFSRM-EFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGV 699
Query: 398 KPDHITFNDVMGA--CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA 455
PD I+F V+ A + +SL+ + I+ G D V N ++ ++ + G L A
Sbjct: 700 APDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEA 759
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
R+ F + D SW+ ++ +AQ G ++ALKLF RM+ P+ +TLV VL+ACSH
Sbjct: 760 RRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLSACSHG 819
Query: 516 GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
GL+EEG H + M E+GI ++EH CVVDLLARAG + +AE+ + +M A V+W +
Sbjct: 820 GLIEEGYHHFTSMGREFGIAGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYVLWMT 879
Query: 576 LLAS 579
LL++
Sbjct: 880 LLSA 883
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 175/586 (29%), Positives = 304/586 (51%), Gaps = 53/586 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L+ C+ ++ GR VH + S+ + D ++QN ++MYGKCG +EDA F +
Sbjct: 4 TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSL 63
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ VSW +++A +++ Q A +++ +M G+ P + TF +++ CS +G + G+
Sbjct: 64 DHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGK 123
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
LH V+++ +++ +LI MY K + DAR VF +A +DV SW SMI + +
Sbjct: 124 LLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHD 183
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+EAL F+ M G PN + + SAC++
Sbjct: 184 RCVEALELFHRMRPSGVL-PNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVS 242
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR-DREL 295
AR +F + P+ SWNA++A H EA+ F M+ +
Sbjct: 243 CAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGI 302
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD +T ++L AC TL G +H I++ G+D+++ V N I+TMY+ C + NA
Sbjct: 303 TPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAA 362
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
F + + D++SWN+II+ Q +E LF RMLA I PD TF ++ A+M
Sbjct: 363 FFSTMVER-DAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQ 421
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+++++L + ++G+ DVF+++ L++++ + G++ AR LF+ M++ D+V W+S+I
Sbjct: 422 EAKILSEL---MVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIIS 478
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYG 533
Y Q G D+AL MR G+ N TLV L AC+ + + EG +H + I E G
Sbjct: 479 SYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAI---ERG 535
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + ++++ A+ GC+ EA+ +Q C ++V W ++ A+
Sbjct: 536 FAASPAVGNALINMYAKCGCLEEADRVFHQ--CGKNLVSWNTIAAA 579
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 157/582 (26%), Positives = 291/582 (50%), Gaps = 50/582 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ CS++ L G+ +H +L + + +V++ ++ MYGKCG +EDAR FDK+
Sbjct: 105 TFVTVLDGCSAIGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKL 164
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++VVSWT+MI Q+ + +A++L+ +M SGV+P + T+ + I AC+ + S+ G+
Sbjct: 165 ALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGK 224
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H+ V++ S ++ A++ MY K + DAR VF + + SW +++AA ++ G
Sbjct: 225 LIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHG 284
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE------------------ 258
+EAL +F M G P++ F ++ +ACS+ A + F E
Sbjct: 285 CCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVG 344
Query: 259 ------------IDSP----------DLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
ID+ D SWN +I+G A +EA+ LF M +
Sbjct: 345 NCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGIT 404
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD T S++ G + + + +++ G + +V + +A++ M+++ + A +
Sbjct: 405 PDKFTFISII---DGTARMQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSL 461
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F ++ K+ D V W SII++ +QH +++ M + + T + ACA + +
Sbjct: 462 FDDM-KDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTA 520
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L +H + + G A V N L+++Y KCG L A ++F+ ++VSW+++
Sbjct: 521 LSEGKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRVFHQC-GKNLVSWNTIAAA 579
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y Q EAL+LF M+ G+ + V+ V VL CS EG ++ I+ E G+
Sbjct: 580 YVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSAS---EGRKIHNIL-LETGMES 635
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++++ + + EA ++M DIV W +++A
Sbjct: 636 DHIVSTALLNMYTASKSLDEASRIFSRMEF-RDIVSWNAMIA 676
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 185/430 (43%), Gaps = 66/430 (15%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
C + + E L+ DF T ++AC+SL +L G+ +H H +
Sbjct: 492 CTRLMRLEGLMGNDF------------TLVTALNACASLTALSEGKLIHAHAIERGFAAS 539
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
+ N ++NMY KCG LE+A F + +N+VSW + A Q + +A++L+ +M
Sbjct: 540 PAVGNALINMYAKCGCLEEADRVFHQCG-KNLVSWNTIAAAYVQRDKWREALQLFQEMQL 598
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD 189
G+ + +F +++ CS S GR++H ++++ S I AL+ MYT + +
Sbjct: 599 EGLKADKVSFVTVLNGCS---SASEGRKIHNILLETGMESDHIVSTALLNMYTASKSLDE 655
Query: 190 ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
A +FS + +D+ SW +MIA ++ G EA+ F M G P++ F +V +A S
Sbjct: 656 ASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGV-APDKISFVTVLNAFS 714
Query: 250 NF------------------------------------------ARILFNEIDSPDLASW 267
AR F I D ASW
Sbjct: 715 GSSPSSLKQARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASW 774
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
N ++ A H +A+ LF M+ PD +T+ S+L AC + +G + +
Sbjct: 775 NVIVTAHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLSACSHGGLIEEG---YHHFTS 831
Query: 328 MGFDSNVPVCNA----ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
MG + + ++ + A+ L A + +++ A V W ++++AC +
Sbjct: 832 MGREFGIAGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYVLWMTLLSACKVQGDEK 891
Query: 384 ELFRLFSRML 393
R+ R++
Sbjct: 892 RAKRVGERVM 901
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 175/523 (33%), Positives = 278/523 (53%), Gaps = 25/523 (4%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
+ V N +++ Y K G+L +AR FD M +R V+WT +I G SQ Q +A +L++QM
Sbjct: 77 NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 136
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
+ G P TF +++ C+G Q+ +IK + S LI N L+ Y K +R+
Sbjct: 137 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLD 196
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS-A 247
A +F + D ++ +++ A +G + L + +H + N F++ S A
Sbjct: 197 LACQLFKEMPEIDSFTFAAVLCA--NIGLDDIVL---GQQIHSFVIKTN-FVWNVFVSNA 250
Query: 248 CSNF---------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR----DRE 294
+F AR LF+E+ D S+N +I+G A A LF E++ DR+
Sbjct: 251 LLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRK 310
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
P ++L L G Q+H+ I DS + V N+++ MYAKC A
Sbjct: 311 QFP----FATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAE 366
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
++F L + +V W ++I+A +Q EE +LF++M + + D TF ++ A A +
Sbjct: 367 MIFTNLTHRS-AVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASI 425
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
ASL + QLH +I K+G +VF + L+D+Y KCGS+ A + F M + ++VSW+++I
Sbjct: 426 ASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMI 485
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
YAQ G + LK F M G+ P+ V+ +GVL+ACSH GLVEEGL + M Y +
Sbjct: 486 SAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKL 545
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
P REH + VVD+L R+G +EAE + +M D D ++W S+L
Sbjct: 546 DPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVL 588
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 152/282 (53%), Gaps = 14/282 (4%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+A ++S S+ ++GR++H +++ ++++ N +++MY KCG E+A M F +
Sbjct: 314 FATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLT 373
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
R+ V WTAMI+ Q + ++L+ +M Q+ V+ Q TF S+++A + + S+ LG+Q
Sbjct: 374 HRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQ 433
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
LH+ +IKS S++ + +AL+ +Y K I DA F + +++ SW +MI+A+++ G
Sbjct: 434 LHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGE 493
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL-----FNEID-----SPDLASW 267
L F EM+ G QP+ F V SACS+ + FN + P +
Sbjct: 494 AEATLKSFKEMVLSG-LQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHY 552
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+++ + NEA L +EM + PD + S+L AC
Sbjct: 553 ASVVDMLCRSGRFNEAEKLMAEM---PIDPDEIMWSSVLNAC 591
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/471 (22%), Positives = 200/471 (42%), Gaps = 47/471 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N V S CK N + A + I T+A ++ A L + LG+++H ++
Sbjct: 183 NTLVDSYCKSNRLDLACQLF-----KEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVI 237
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ +V + N +L+ Y K S+ DAR FD+MP+++ VS+ +I+G + + + A
Sbjct: 238 KTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFD 297
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ ++ + QF F +++ S +GRQ+HA I + S ++ N+L+ MY
Sbjct: 298 LFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYA 357
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + +A +F+ + + W +MI+A+ + G+ E L FN+M + ++ F
Sbjct: 358 KCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKM-RQASVIADQATFA 416
Query: 243 SVFSACSNFARI----------------------------------------LFNEIDSP 262
S+ A ++ A + F E+
Sbjct: 417 SLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDR 476
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM-QV 321
++ SWNA+I+ A + A + F EM L PD ++ +L AC + +G+
Sbjct: 477 NIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHF 536
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
+S D +++ M + A + E+ + D + W+S++ AC H
Sbjct: 537 NSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKN 596
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
E R ++ + D + ++ A E V+++H + G+
Sbjct: 597 QELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGV 647
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 166/396 (41%), Gaps = 47/396 (11%)
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
+DAR V +G D + + F K G +A F +M H N I G V S
Sbjct: 34 IDARIVKTGF-DPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSG 92
Query: 248 CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC 307
AR LF+ + +W LI G + + EA LF +M+ PD +T +LL
Sbjct: 93 NLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLS 152
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
C G Q QV + IIK+G+DS + V N ++ Y K + L A +FKE+
Sbjct: 153 GCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMP------ 206
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
+ D TF V+ A + + + Q+H ++
Sbjct: 207 ------------------------------EIDSFTFAAVLCANIGLDDIVLGQQIHSFV 236
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
KT ++VFV N L+D Y K S+ ARKLF+ M D VS++ +I GYA G A
Sbjct: 237 IKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAF 296
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH----CSC 543
LF ++ +L+ S+ E G ++ I+ T + +
Sbjct: 297 DLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIH-----AQTIVTTADSEILVGNS 351
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+VD+ A+ G EAE + + V W +++++
Sbjct: 352 LVDMYAKCGKFEEAEMIFTNLTHRS-AVPWTAMISA 386
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 31/128 (24%)
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS------- 469
L +V + I KTG D N + ++K G L AR+LF M + + VS
Sbjct: 28 LNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISG 87
Query: 470 ------------------------WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
W+ LI GY+Q EA +LF +M+ G P+ VT
Sbjct: 88 YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 147
Query: 506 VGVLTACS 513
V +L+ C+
Sbjct: 148 VTLLSGCN 155
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 165/503 (32%), Positives = 257/503 (51%), Gaps = 43/503 (8%)
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
+A+ + M+ G F +++ C+ L S+ GR++HA ++KS + +N L
Sbjct: 29 KEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTL 88
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
++MY K + DAR VF I +++ SW +MI AF LEA + M G +P+
Sbjct: 89 LSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGC-KPD 147
Query: 238 EFIFGSVFSACSN----------------------------------------FARILFN 257
+ F S+ +A +N AR++F+
Sbjct: 148 KVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFD 207
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
+ ++ +W LIAG A + A+ L M+ E+ P+ +T S+L C L
Sbjct: 208 RLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEH 267
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G +VH YII+ G+ + V N+++TMY KC L A +F +L + D V+W +++
Sbjct: 268 GKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDL-PHRDVVTWTAMVTGYA 326
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
Q +E LF RM IKPD +TF V+ +C+ A L+ ++H + G DV+
Sbjct: 327 QLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVY 386
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY-AQFGCGDEALKLFTRMRSL 496
+ + L+ +Y KCGS+ A +FN M +VV+W+++I G AQ G EAL+ F +M+
Sbjct: 387 LQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQ 446
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
G+ P+ VT VL+AC+HVGLVEEG +R M +YGI P EH SC VDLL RAG + E
Sbjct: 447 GIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEE 506
Query: 557 AEDFINQMACDADIVVWKSLLAS 579
AE+ I M VW +LL++
Sbjct: 507 AENVILSMPFIPGPSVWGALLSA 529
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/458 (30%), Positives = 227/458 (49%), Gaps = 52/458 (11%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNI----RIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
VS LCK EAL NT I R+ + GL+ C+ LRSL+ GR+VH I
Sbjct: 19 VSVLCKTGRLKEAL-----GIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAI 73
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
L S QP+ L+N +L+MY KCGSL DAR FD + RN+VSWTAMI + +A
Sbjct: 74 LKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAF 133
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
K Y M +G P + TF S++ A + + LG+++H ++++ +L+ MY
Sbjct: 134 KCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMY 193
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K I AR +F + K+V +W +IA +++ G +++ E + PN+ F
Sbjct: 194 AKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQG-QVDVALELLETMQQAEVAPNKITF 252
Query: 242 GSVFSACSNF----------------------------------------ARILFNEIDS 261
S+ C+ AR LF+++
Sbjct: 253 ASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPH 312
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
D+ +W A++ G A +EA++LF M+ + + PD +T S+L +C L +G ++
Sbjct: 313 RDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRI 372
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA-CLQHN 380
H ++ G++ +V + +A+++MYAKC + +A LVF ++ + + V+W +II C QH
Sbjct: 373 HQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSER-NVVAWTAIITGCCAQHG 431
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ E F +M IKPD +TF V+ AC + +E
Sbjct: 432 RCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVE 469
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 212/433 (48%), Gaps = 49/433 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L++A ++ LQLG+KVH I+ + + + + ++ MY KCG + AR+ FD++
Sbjct: 150 TFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRL 209
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P++NVV+WT +IAG +Q Q + A++L M Q+ V P + TF SI++ C+ ++ G+
Sbjct: 210 PEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGK 269
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H ++I+S +G L N+LI MY K + +AR +FS + +DV +W +M+ +++LG
Sbjct: 270 KVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLG 329
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------------- 249
+ EA+ F M G +P++ F SV ++CS
Sbjct: 330 FHDEAINLFRRMQQQG-IKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQ 388
Query: 250 -------------NFARILFNEIDSPDLASWNALIAG-VASHSNANEAMSLFSEMRDREL 295
+ A ++FN++ ++ +W A+I G A H EA+ F +M+ + +
Sbjct: 389 SALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGI 448
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
PD +T S+L AC + +G + S + G V + + + + L A
Sbjct: 449 KPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAE 508
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD----HITFNDVMGA 410
V + W ++++AC H+ E R +L ++ PD ++ + + A
Sbjct: 509 NVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVL--KLDPDDDGAYVALSSIYAA 566
Query: 411 CAKMASLEMVTQL 423
+ E V Q+
Sbjct: 567 AGRYEDAEKVRQV 579
>gi|15217514|ref|NP_177305.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169720|sp|Q9C9I6.1|PP116_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71490
gi|12323739|gb|AAG51835.1|AC016163_24 unknown protein; 40702-42747 [Arabidopsis thaliana]
gi|56381899|gb|AAV85668.1| At1g71490 [Arabidopsis thaliana]
gi|56790238|gb|AAW30036.1| At1g71490 [Arabidopsis thaliana]
gi|332197086|gb|AEE35207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 681
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 272/542 (50%), Gaps = 33/542 (6%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A L+SAC +R+ G +VH H + S + VL ++ Y +A+ +
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+ + W +IA ++N + I Y +M+ G+ P FT+ S++KAC V GR +
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVV 166
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H + S + S L NALI+MY +F + AR +F + +D SW ++I ++ G
Sbjct: 167 HGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMW 226
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHS 278
EA F++M G + +WN + G
Sbjct: 227 SEAFELFDKMWFSGV---------------------------EVSVITWNIISGGCLQTG 259
Query: 279 NANEAMSLFSEMRD--RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
N A+ L S MR+ L P + + C+ IG + L G ++H I +D V
Sbjct: 260 NYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRL--GKEIHGLAIHSSYDGIDNV 317
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
N ++TMY+KC L +AL+VF++ +N+ +WNSII+ Q N++EE L ML +
Sbjct: 318 RNTLITMYSKCKDLRHALIVFRQTEENS-LCTWNSIISGYAQLNKSEEASHLLREMLVAG 376
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD-VFVMNGLMDIYIKCGSLGSA 455
+P+ IT ++ CA++A+L+ + HCYI + D + N L+D+Y K G + +A
Sbjct: 377 FQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAA 436
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
+++ + M D V+++SLI GY G G AL LF M G+ P+ VT+V VL+ACSH
Sbjct: 437 KQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHS 496
Query: 516 GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
LV EG L+ M+ EYGI P +H SC+VDL RAG + +A+D I+ M W +
Sbjct: 497 KLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWAT 556
Query: 576 LL 577
LL
Sbjct: 557 LL 558
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 190/463 (41%), Gaps = 89/463 (19%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N ++S K L+ E + AY + + IRP TY ++ AC + GR VH
Sbjct: 113 NVLIASYAKNELFEEVIAAY---KRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
I +S + + + N +++MY + ++ AR FD+M +R+ VSW A+I + ++A
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEA 229
Query: 121 IKLYIQMLQSGVMPGQFTFGSI-----------------------------------IKA 145
+L+ +M SGV T+ I +KA
Sbjct: 230 FELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKA 289
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
CS +G++ LG+++H I S + +N LI MY+K + A VF + +W
Sbjct: 290 CSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTW 349
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------- 254
S+I+ +++L EA EML G +QPN S+ C+ A +
Sbjct: 350 NSIISGYAQLNKSEEASHLLREMLVAG-FQPNSITLASILPLCARIANLQHGKEFHCYIL 408
Query: 255 ----------LFNEI--------------------DSPDLASWNALIAGVASHSNANEAM 284
L+N + D ++ +LI G + A+
Sbjct: 409 RRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVAL 468
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC----NAI 340
+LF EM + PD +TV ++L AC +++G ++ +KM + + C + +
Sbjct: 469 ALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERL---FMKMQCEYGIRPCLQHFSCM 525
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ +Y + L A + + +W +++ AC H +
Sbjct: 526 VDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQ 568
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 165/523 (31%), Positives = 266/523 (50%), Gaps = 45/523 (8%)
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
N+ +W + Q AI + +L+S + T I+ A G + LG Q+H
Sbjct: 858 NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIH 917
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
A VIKS + N+L+ MY+K + A F D+ SW +MI+++++ E+
Sbjct: 918 ALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEM 977
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------------ 249
EA+C F ++L G +P++F SV ACS
Sbjct: 978 EAICTFRDLLRDG-LKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVS 1036
Query: 250 -------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+ A L + DLASWNA++ G + + +A+ FS M + +
Sbjct: 1037 TALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIP 1096
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
D +T+ + + A + L QG Q+ +Y IK+GF++++ V + +L MY KC + NAL +
Sbjct: 1097 IDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALEL 1156
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F E+ + D V+W ++I+ +++ + ++ M S ++PD TF ++ A + + +
Sbjct: 1157 FGEISR-PDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTA 1215
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
LE Q+H + K + D FV L+D+Y KCGS+ A ++F M+ VV W++++LG
Sbjct: 1216 LEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLG 1275
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
AQ G DEAL LF M+S G+ P+ VT +GVL+ACSH GL E + M YGI P
Sbjct: 1276 LAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITP 1335
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH SC+VD L RAG + EAE+ I M A ++++LL +
Sbjct: 1336 EIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGA 1378
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 148/557 (26%), Positives = 263/557 (47%), Gaps = 31/557 (5%)
Query: 47 SLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTA 106
++ L+LG++ H I+ S PD L N+++ MY KCGSL AR FDK R++V+W +
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 107 MIAGCSQ---NYQEN--DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
++A +Q + EN + +L+ + + G + T ++K C G V + +H +
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
+K L AL+ +Y K+ + AR +F + +D W M+ A+ + ++ EA
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802
Query: 222 LCHFNEMLHHGAYQPN----EFIFGSVFSACSN-----------FARILFNEIDSPDLAS 266
L F+ H + P+ + G V S SN +A +F ++ +
Sbjct: 803 LRFFS-AFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFA 861
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WN + A+ F + + D +T+ +L A +G L G Q+H+ +I
Sbjct: 862 WNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVI 921
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
K F VPV N+++ MY+K V+ A F D +SWN++I++ Q+N E
Sbjct: 922 KSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFIN-SPELDLISWNTMISSYAQNNLEMEAI 980
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT---QLHCYITKTGLAFDVFVMNGLM 443
F +L +KPD T V+ AC+ E T Q+H Y K G+ D FV L+
Sbjct: 981 CTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALI 1040
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
D+Y K G + A L + + D+ SW++++ GY + +AL+ F+ M +G+ + +
Sbjct: 1041 DLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEI 1100
Query: 504 TLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
TL + A + +++G + Y I + G S V+D+ + G + A +
Sbjct: 1101 TLATAIKASGCLINLKQGKQIQAYAI---KLGFNNDLWVSSGVLDMYIKCGDMPNALELF 1157
Query: 562 NQMACDADIVVWKSLLA 578
+++ D V W ++++
Sbjct: 1158 GEIS-RPDEVAWTTMIS 1173
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 194/415 (46%), Gaps = 45/415 (10%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++SA L LG ++H ++ S P V + N ++NMY K G + A F P+ +
Sbjct: 900 ILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELD 959
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS---VCLGRQ 157
++SW MI+ +QN E +AI + +L+ G+ P QFT S+++ACS LG Q
Sbjct: 960 LISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQ 1019
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H + IK + ALI +Y+K ++ +A + G D+ SW +++ + K
Sbjct: 1020 VHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNK 1079
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSA------------------------------ 247
+AL HF+ ++H +E + A
Sbjct: 1080 SRKALEHFS-LMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSS 1138
Query: 248 --------CSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
C + A LF EI PD +W +I+G + + + A+S++ MR + P
Sbjct: 1139 GVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQP 1198
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D T +L+ A L QG Q+H+ ++K+ + + V +++ MY KC + +A VF
Sbjct: 1199 DEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVF 1258
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
+++ V WN+++ QH +E LF M ++ I+PD +TF V+ AC+
Sbjct: 1259 RKMDVRK-VVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACS 1312
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 126/228 (55%), Gaps = 3/228 (1%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I I T A I A L +L+ G+++ + + D+ + + +L+MY KCG + +A
Sbjct: 1095 IPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNAL 1154
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F ++ + + V+WT MI+G +N E+ A+ +Y M SGV P ++TF ++IKA S L
Sbjct: 1155 ELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLT 1214
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G+Q+HA+V+K ++ +L+ MY K + DA VF + + V W +M+
Sbjct: 1215 ALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLL 1274
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE 258
++ G+ EAL F M +G QP++ F V SACS+ LF+E
Sbjct: 1275 GLAQHGHVDEALNLFRTMQSNG-IQPDKVTFIGVLSACSHSG--LFSE 1319
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 191/439 (43%), Gaps = 52/439 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAY-DFSQNNTNIRIRPS--TYAGLISACSSLRS---LQLGRK 56
N +SS + NL EA+ + D ++ ++P T A ++ ACS+ LG +
Sbjct: 964 NTMISSYAQNNLEMEAICTFRDLLRDG----LKPDQFTLASVLRACSTGDEGEYFTLGSQ 1019
Query: 57 VHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQ 116
VH + + D + ++++Y K G +++A ++ SW A++ G ++ +
Sbjct: 1020 VHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNK 1079
Query: 117 ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA 176
A++ + M + G+ + T + IKA L ++ G+Q+ A+ IK + L +
Sbjct: 1080 SRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSG 1139
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
++ MY K + +A +F I+R D +W +MI+ + + G E AL ++ M G QP
Sbjct: 1140 VLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGV-QP 1198
Query: 237 NEFIFGSVFSACS-------------NFARI---------------------------LF 256
+E+ F ++ A S N ++ +F
Sbjct: 1199 DEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVF 1258
Query: 257 NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
++D + WNA++ G+A H + +EA++LF M+ + PD +T +L AC
Sbjct: 1259 RKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFS 1318
Query: 317 QGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
+ + + K G + + ++ + + A V + A + + +++ A
Sbjct: 1319 EAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGA 1378
Query: 376 CLQHNQAEELFRLFSRMLA 394
C AE R+ ++LA
Sbjct: 1379 CRTKGDAETAKRVADKLLA 1397
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 98/203 (48%), Gaps = 6/203 (2%)
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
+ I L G + H+ I+ G + + N ++TMY+KC LC+A VF + + D V
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDK-SSDRDLV 678
Query: 368 SWNSIIAACLQ-----HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
+WNSI+AA Q + E FRLF + +T ++ C +++
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGC 482
+H Y K G D+FV L++IY K G +G AR LF+ M D V W+ ++ Y +
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798
Query: 483 GDEALKLFTRMRSLGVSPNLVTL 505
DEAL+ F+ G P+ L
Sbjct: 799 QDEALRFFSAFHRSGFXPDFSNL 821
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/463 (33%), Positives = 254/463 (54%), Gaps = 33/463 (7%)
Query: 117 ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA 176
E ++ IQ+L P T+ ++++ C L ++ G ++HAH S ++ N
Sbjct: 70 EQKRLREAIQILDHVDRPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNR 129
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
++ MY K + +++A+ +F +A +D+ SW MI+ ++K G EA
Sbjct: 130 ILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEA--------------- 174
Query: 237 NEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
R LF+++ D SW A+ +G H EA+ LF M+ E
Sbjct: 175 ----------------RKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENF 218
Query: 297 P-DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
+ T+ S L A +L+ G ++H +I+++G D + V +A+ MY KC + A
Sbjct: 219 KCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARH 278
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F + + D VSW ++I + + EE F LFS +L S I P+ TF+ V+ ACA A
Sbjct: 279 IFDKT-VDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNACADHA 337
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+ E+ Q+H Y+T+ G F + L+ +Y KCG++ +AR++FN M PD+VSW+SLI
Sbjct: 338 AEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLIS 397
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
GYAQ G DEAL+ F + G P+ +T VGVL+AC+H GLV++GL + ++ ++G+
Sbjct: 398 GYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLT 457
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
T +H +C++DLL+R+G + EAED I++M + D +W SLL
Sbjct: 458 HTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLG 500
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 136/521 (26%), Positives = 220/521 (42%), Gaps = 91/521 (17%)
Query: 2 SNDYVSSLCKQNLYNEAL-VAYDFSQNNTNIRI-----RPS--TYAGLISACSSLRSLQL 53
++ V LCK N + EA+ + + + I+I RPS TY+ L+ C LR+L
Sbjct: 48 KDELVKRLCKDNNFKEAIDILCEQKRLREAIQILDHVDRPSAATYSTLLQLCLQLRALDE 107
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKC------------------------------ 83
G KVH H S P VV+ N IL+MY KC
Sbjct: 108 GMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAK 167
Query: 84 -GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ-SGVMPGQFTFGS 141
G L++AR FD+M +R+ SWTAM +G ++ Q +A++L+ M + +FT S
Sbjct: 168 AGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSS 227
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
+ A + + S+ LG+++H H+++ + +AL MY K I +AR++F +D
Sbjct: 228 ALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRD 287
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------- 251
V SW +MI + K G E F+++L G + PNEF F V +AC++
Sbjct: 288 VVSWTAMIDRYFKEGRREEGFALFSDLLKSGIW-PNEFTFSGVLNACADHAAEELGKQVH 346
Query: 252 ------------------------------ARILFNEIDSPDLASWNALIAGVASHSNAN 281
AR +FN + PDL SW +LI+G A + +
Sbjct: 347 GYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPD 406
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAI 340
EA+ F + PD +T +L AC + +G++ I K G +
Sbjct: 407 EALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACL 466
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRLFSRML 393
+ + ++ L A + ++ D W S++ C H AE LF +
Sbjct: 467 IDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENP 526
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
A+ +I G +A + V + K GL++
Sbjct: 527 ATYTTLANIYA--TAGLWGGVAEVRKVMDARGVVKKPGLSW 565
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 187/433 (43%), Gaps = 47/433 (10%)
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
L +A D + + + +++ ++ C Q ++ +K++ SG +PG I+
Sbjct: 74 LREAIQILDHVDRPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDM 133
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
S+ ++L + + + L + N +I+ Y K R+ +AR +F + +D SW
Sbjct: 134 YIKCNSLVNAKRLFDEMAERD----LCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSW 189
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF------------------------ 241
+M + + + EAL F M H ++ N+F
Sbjct: 190 TAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHIL 249
Query: 242 -------GSVFSACSNF---------ARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
G V+SA S+ AR +F++ D+ SW A+I E +
Sbjct: 250 RIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFA 309
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
LFS++ + P+ T +L AC G QVH Y+ ++GFD + + ++ MY
Sbjct: 310 LFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYT 369
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
KC + NA VF + + D VSW S+I+ Q+ Q +E + F +L S +PDHITF
Sbjct: 370 KCGNIKNARRVFNGMPR-PDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFV 428
Query: 406 DVMGACAKMASLEMVTQLHCYIT-KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME- 463
V+ AC ++ + I K GL L+D+ + G L A + + M
Sbjct: 429 GVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPI 488
Query: 464 NPDVVSWSSLILG 476
PD W+SL+ G
Sbjct: 489 EPDKFLWASLLGG 501
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 165/523 (31%), Positives = 266/523 (50%), Gaps = 45/523 (8%)
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
N+ +W + Q AI + +L+S + T I+ A G + LG Q+H
Sbjct: 858 NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIH 917
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
A VIKS + N+L+ MY+K + A F D+ SW +MI+++++ E+
Sbjct: 918 ALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEM 977
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------------ 249
EA+C F ++L G +P++F SV ACS
Sbjct: 978 EAICTFRDLLRDG-LKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVS 1036
Query: 250 -------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+ A L + DLASWNA++ G + + +A+ FS M + +
Sbjct: 1037 TALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIP 1096
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
D +T+ + + A + L QG Q+ +Y IK+GF++++ V + +L MY KC + NAL +
Sbjct: 1097 IDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALEL 1156
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F E+ + D V+W ++I+ +++ + ++ M S ++PD TF ++ A + + +
Sbjct: 1157 FGEISR-PDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTA 1215
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
LE Q+H + K + D FV L+D+Y KCGS+ A ++F M+ VV W++++LG
Sbjct: 1216 LEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLG 1275
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
AQ G DEAL LF M+S G+ P+ VT +GVL+ACSH GL E + M YGI P
Sbjct: 1276 LAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITP 1335
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH SC+VD L RAG + EAE+ I M A ++++LL +
Sbjct: 1336 EIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGA 1378
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 148/557 (26%), Positives = 263/557 (47%), Gaps = 31/557 (5%)
Query: 47 SLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTA 106
++ L+LG++ H I+ S PD L N+++ MY KCGSL AR FDK R++V+W +
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 107 MIAGCSQ---NYQEN--DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
++A +Q + EN + +L+ + + G + T ++K C G V + +H +
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
+K L AL+ +Y K+ + AR +F + +D W M+ A+ + ++ EA
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802
Query: 222 LCHFNEMLHHGAYQPN----EFIFGSVFSACSN-----------FARILFNEIDSPDLAS 266
L F+ H + P+ + G V S SN +A +F ++ +
Sbjct: 803 LRFFS-AFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFA 861
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WN + A+ F + + D +T+ +L A +G L G Q+H+ +I
Sbjct: 862 WNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVI 921
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
K F VPV N+++ MY+K V+ A F D +SWN++I++ Q+N E
Sbjct: 922 KSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFIN-SPELDLISWNTMISSYAQNNLEMEAI 980
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT---QLHCYITKTGLAFDVFVMNGLM 443
F +L +KPD T V+ AC+ E T Q+H Y K G+ D FV L+
Sbjct: 981 CTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALI 1040
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
D+Y K G + A L + + D+ SW++++ GY + +AL+ F+ M +G+ + +
Sbjct: 1041 DLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEI 1100
Query: 504 TLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
TL + A + +++G + Y I + G S V+D+ + G + A +
Sbjct: 1101 TLATAIKASGCLINLKQGKQIQAYAI---KLGFNNDLWVSSGVLDMYIKCGDMPNALELF 1157
Query: 562 NQMACDADIVVWKSLLA 578
+++ D V W ++++
Sbjct: 1158 GEIS-RPDEVAWTTMIS 1173
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 194/415 (46%), Gaps = 45/415 (10%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++SA L LG ++H ++ S P V + N ++NMY K G + A F P+ +
Sbjct: 900 ILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELD 959
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS---VCLGRQ 157
++SW MI+ +QN E +AI + +L+ G+ P QFT S+++ACS LG Q
Sbjct: 960 LISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQ 1019
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H + IK + ALI +Y+K ++ +A + G D+ SW +++ + K
Sbjct: 1020 VHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNK 1079
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSA------------------------------ 247
+AL HF+ ++H +E + A
Sbjct: 1080 SRKALEHFS-LMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSS 1138
Query: 248 --------CSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
C + A LF EI PD +W +I+G + + + A+S++ MR + P
Sbjct: 1139 GVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQP 1198
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D T +L+ A L QG Q+H+ ++K+ + + V +++ MY KC + +A VF
Sbjct: 1199 DEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVF 1258
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
+++ V WN+++ QH +E LF M ++ I+PD +TF V+ AC+
Sbjct: 1259 RKMDVRK-VVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACS 1312
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 126/228 (55%), Gaps = 3/228 (1%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I I T A I A L +L+ G+++ + + D+ + + +L+MY KCG + +A
Sbjct: 1095 IPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNAL 1154
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F ++ + + V+WT MI+G +N E+ A+ +Y M SGV P ++TF ++IKA S L
Sbjct: 1155 ELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLT 1214
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G+Q+HA+V+K ++ +L+ MY K + DA VF + + V W +M+
Sbjct: 1215 ALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLL 1274
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE 258
++ G+ EAL F M +G QP++ F V SACS+ LF+E
Sbjct: 1275 GLAQHGHVDEALNLFRTMQSNG-IQPDKVTFIGVLSACSHSG--LFSE 1319
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 191/439 (43%), Gaps = 52/439 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAY-DFSQNNTNIRIRPS--TYAGLISACSSLRS---LQLGRK 56
N +SS + NL EA+ + D ++ ++P T A ++ ACS+ LG +
Sbjct: 964 NTMISSYAQNNLEMEAICTFRDLLRDG----LKPDQFTLASVLRACSTGDEGEYFTLGSQ 1019
Query: 57 VHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQ 116
VH + + D + ++++Y K G +++A ++ SW A++ G ++ +
Sbjct: 1020 VHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNK 1079
Query: 117 ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA 176
A++ + M + G+ + T + IKA L ++ G+Q+ A+ IK + L +
Sbjct: 1080 SRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSG 1139
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
++ MY K + +A +F I+R D +W +MI+ + + G E AL ++ M G QP
Sbjct: 1140 VLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGV-QP 1198
Query: 237 NEFIFGSVFSACS-------------NFARI---------------------------LF 256
+E+ F ++ A S N ++ +F
Sbjct: 1199 DEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVF 1258
Query: 257 NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
++D + WNA++ G+A H + +EA++LF M+ + PD +T +L AC
Sbjct: 1259 RKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFS 1318
Query: 317 QGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
+ + + K G + + ++ + + A V + A + + +++ A
Sbjct: 1319 EAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGA 1378
Query: 376 CLQHNQAEELFRLFSRMLA 394
C AE R+ ++LA
Sbjct: 1379 CRTKGDAETAKRVADKLLA 1397
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 98/203 (48%), Gaps = 6/203 (2%)
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
+ I L G + H+ I+ G + + N ++TMY+KC LC+A VF + + D V
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDK-SSDRDLV 678
Query: 368 SWNSIIAACLQ-----HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
+WNSI+AA Q + E FRLF + +T ++ C +++
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGC 482
+H Y K G D+FV L++IY K G +G AR LF+ M D V W+ ++ Y +
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798
Query: 483 GDEALKLFTRMRSLGVSPNLVTL 505
DEAL+ F+ G P+ L
Sbjct: 799 QDEALRFFSAFHRSGFFPDFSNL 821
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 166/544 (30%), Positives = 272/544 (50%), Gaps = 45/544 (8%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MYGKCGS+ DA F + N VSWT ++A ++N +A+ Y +M+ G+ P
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGS-HLIAQNALIAMYTKFDRILDARNVFSGI 197
F I CS + G+ LHA ++++ +I ALI MY + + AR F +
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG--AYQPNEFIFGSVFSACS------ 249
+K + +W ++IA +S+ G AL + +M+ +P+ F S AC+
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 250 ----------------------------------NFARILFNEIDSPDLASWNALIAGVA 275
AR +F+ + + D+ +WN +I+G A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
A +A+ LF M + P+ +T LL AC L QG +H + + G++S++
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300
Query: 336 VCNAILTMYAKCSV-LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
+ N +L MY KCS L A VF+ + + D ++WN +I A +Q+ QA++ +F +M
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERM-RTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
+ P+ IT ++V+ ACA + + +H I DV + N LM++Y +CGSL
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDD 419
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
+F + + +VSWS+LI YAQ G L+ F + G++ + VT+V L+ACSH
Sbjct: 420 TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSH 479
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
G+++EG+ + M ++G+ P H C+VDLL+RAG + AE+ I+ M D V W
Sbjct: 480 GGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539
Query: 575 SLLA 578
SLL+
Sbjct: 540 SLLS 543
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 147/518 (28%), Positives = 248/518 (47%), Gaps = 50/518 (9%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
V++ + Y EAL Y +R + + I CSS + L+ G+ +H IL ++
Sbjct: 30 VAAFARNGHYREAL-GYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETR 88
Query: 66 C-QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
+ D++L ++ MY +C LE AR FD+M ++ +V+W A+IAG S+N A+K+Y
Sbjct: 89 LLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIY 148
Query: 125 IQMLQS---GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
M+ G+ P TF S + AC+ +G + GR++ A + S + S I QNALI MY
Sbjct: 149 QDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMY 208
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
+K + AR VF + +DV +W +MI+ ++K G +AL F M + +PN F
Sbjct: 209 SKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDP-KPNVVTF 267
Query: 242 GSVFSACSNF-----------------------------------------ARILFNEID 260
+ +AC+N AR +F +
Sbjct: 268 IGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMR 327
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ D+ +WN LI + A +A+ +F +M+ + P+ +T+ ++L AC QG
Sbjct: 328 TRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKA 387
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
VH+ I ++V + N+++ MY +C L + + VF + ++ VSW+++IAA QH
Sbjct: 388 VHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAI-RDKSLVSWSTLIAAYAQHG 446
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVFVM 439
+ F +L + D +T + AC+ L E V + GLA D
Sbjct: 447 HSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHF 506
Query: 440 NGLMDIYIKCGSLGSARKLFNFMEN-PDVVSWSSLILG 476
++D+ + G L +A L + M PD V+W+SL+ G
Sbjct: 507 LCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSG 544
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 189/411 (45%), Gaps = 47/411 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T++ + AC+ + + GR++ + S D ++QN ++NMY KCGSLE AR FD++
Sbjct: 165 TFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRL 224
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+V++W MI+G ++ A++L+ +M + P TF ++ AC+ L + GR
Sbjct: 225 KNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGR 284
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL-DARNVFSGIARKDVTSWGSMIAAFSKL 215
+H V + + S L+ N L+ MYTK L +AR VF + +DV +W +I A+ +
Sbjct: 285 AIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQY 344
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------------- 249
G +AL F +M PNE +V SAC+
Sbjct: 345 GQAKDALDIFKQMQLENV-APNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVL 403
Query: 250 -NFARILFNEIDSPD-------------LASWNALIAGVASHSNANEAMSLFSEMRDREL 295
N ++N S D L SW+ LIA A H ++ + F E+ L
Sbjct: 404 ENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGL 463
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY---AKCSVLCN 352
D +T+ S L AC L +G+Q +++ +G P L M ++ L
Sbjct: 464 AADDVTMVSTLSACSHGGMLKEGVQ--TFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEA 521
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
A + ++ D+V+W S+++ C HN + R+ ++ + + +H T
Sbjct: 522 AENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHST 572
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 160/318 (50%), Gaps = 16/318 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S KQ +AL + N + + T+ GL++AC++L L+ GR +H +
Sbjct: 233 NTMISGYAKQGAATQALELFQRMGPN-DPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVR 291
Query: 63 LSKCQPDVVLQNHILNMYGKCGS-LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ D+V+ N +LNMY KC S LE+AR F++M R+V++W +I Q Q DA+
Sbjct: 292 EDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDAL 351
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
++ QM V P + T +++ AC+ LG+ G+ +HA + + ++ +N+L+ MY
Sbjct: 352 DIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMY 411
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
+ + D VF+ I K + SW ++IAA+++ G+ L HF E+L G ++
Sbjct: 412 NRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEG-LAADDVTM 470
Query: 242 GSVFSACSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
S SACS+ F ++ + +PD + ++ ++ A +L +M
Sbjct: 471 VSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDM- 529
Query: 292 DRELLPDGLTVHSLLCAC 309
LPD + SLL C
Sbjct: 530 --PFLPDAVAWTSLLSGC 545
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/493 (31%), Positives = 262/493 (53%), Gaps = 38/493 (7%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F+ + + N++ W M+ G + + A+++Y++M+ G +P ++F ++K+C+ +
Sbjct: 21 FETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAF 80
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
GRQ+HA V+K G +LI+MY + + DAR VF + +DV S ++I +
Sbjct: 81 EEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGY 140
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
+ G +F AR +F+EI D+ SWNA+I
Sbjct: 141 ASRG---------------------DF----------RSARKVFDEITERDVVSWNAMIT 169
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM---- 328
G + EA+ LF EM + PD T+ S++ AC ++ G QVHS++
Sbjct: 170 GYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDH 229
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
GF S++ + NA++ +Y+KC + A +F+ L D VSWN++I N +E L
Sbjct: 230 GFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCK-DVVSWNTLIGGYTHTNLYKEALLL 288
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT--GLAFDVFVMNGLMDIY 446
F ML S P+ +T V+ ACA + ++++ +H YI K G+ + + L+D+Y
Sbjct: 289 FQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMY 348
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KCG + +A ++FN M + SW+++I G+A G + A LF+RMR V P+ +T V
Sbjct: 349 AKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFV 408
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
G+L+ACSH GL++ G +++ M +Y + P EH C++DLL +G EAE+ I+ M
Sbjct: 409 GLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPM 468
Query: 567 DADIVVWKSLLAS 579
+ D V+W SLL +
Sbjct: 469 EPDGVIWCSLLKA 481
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 174/351 (49%), Gaps = 39/351 (11%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+A +F I P+L WN ++ G AS S+ A+ ++ M LP+ + LL +C
Sbjct: 16 YAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCA 75
Query: 311 GRLTLYQGMQVHSYIIKMG---------------------------FDS----NVPVCNA 339
+G Q+H+ ++K+G FD+ +V C A
Sbjct: 76 KSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTA 135
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
++T YA +A VF E+ + D VSWN++I +++ + EE LF M+ + ++P
Sbjct: 136 LITGYASRGDFRSARKVFDEITER-DVVSWNAMITGYVENGRYEEALELFKEMMRTNVRP 194
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKT----GLAFDVFVMNGLMDIYIKCGSLGSA 455
D T V+ ACA+ S+E+ Q+H ++ G + + ++N L+D+Y KCG + +A
Sbjct: 195 DEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETA 254
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
LF + DVVSW++LI GY EAL LF M G PN VTL+ VL AC+H+
Sbjct: 255 FGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHL 314
Query: 516 GLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
G ++ G +H+Y I + G+ + ++D+ A+ G + A N M
Sbjct: 315 GAIDIGRWIHVY-IDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSM 364
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 201/447 (44%), Gaps = 83/447 (18%)
Query: 35 PSTYAG--LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
P++Y+ L+ +C+ ++ + GR++H +L C D + +++MY + G LEDAR
Sbjct: 62 PNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKV 121
Query: 93 FD-------------------------------KMPQRNVVSWTAMIAGCSQNYQENDAI 121
FD ++ +R+VVSW AMI G +N + +A+
Sbjct: 122 FDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEAL 181
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV--IKSEHG--SHLIAQNAL 177
+L+ +M+++ V P + T S++ AC+ GS+ LGRQ+H+ V +HG S L NAL
Sbjct: 182 ELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNAL 241
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
I +Y+K + A +F G++ KDV SW ++I ++ EAL F EML G PN
Sbjct: 242 IDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGEC-PN 300
Query: 238 EFIFGSVFSACSNFARI------------------------------------------L 255
+ SV AC++ I +
Sbjct: 301 DVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQV 360
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
FN + L+SWNA+I G A H AN A LFS MR + PD +T LL AC L
Sbjct: 361 FNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLL 420
Query: 316 YQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
G Q+ + + + ++ + + A + + D V W S++
Sbjct: 421 DLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLK 480
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDH 401
AC +H EL F++ L +I+P++
Sbjct: 481 ACKKHGNL-ELAESFAQKLI-KIEPEN 505
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 154/323 (47%), Gaps = 21/323 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + Y EAL + TN+R T ++SAC+ S++LGR+VH +
Sbjct: 165 NAMITGYVENGRYEEALELFK-EMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVD 223
Query: 63 LSKC----QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
+ + N ++++Y KCG +E A F+ + ++VVSW +I G +
Sbjct: 224 DDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYK 283
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG--SHLIAQNA 176
+A+ L+ +ML+SG P T S++ AC+ LG++ +GR +H ++ K G + + +
Sbjct: 284 EALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTS 343
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
LI MY K I A VF+ + + ++SW +MI F+ G A F+ M +P
Sbjct: 344 LIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRM-RGNRVEP 402
Query: 237 NEFIFGSVFSACS-----NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMSL 286
++ F + SACS + R +F + +P L + +I + EA +
Sbjct: 403 DDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEM 462
Query: 287 FSEMRDRELLPDGLTVHSLLCAC 309
M + PDG+ SLL AC
Sbjct: 463 IHTM---PMEPDGVIWCSLLKAC 482
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 179/618 (28%), Positives = 304/618 (49%), Gaps = 44/618 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +SS + L N+AL Y F + ST+ L+ AC +L++ + + D +
Sbjct: 103 NSIISSFVRMGLLNQALAFY-FKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVS 161
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + + ++ Y + G ++ A FD++ Q++ V W M+ G ++ + IK
Sbjct: 162 SLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIK 221
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ M + P TF ++ C+ + LG QLH V+ S +N+L++MY+
Sbjct: 222 GFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYS 281
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K R DA +F ++R D +W MI+ + + G E+L F EM+ G P+ F
Sbjct: 282 KCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVL-PDAITFS 340
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
S+ + S F A+ +F++ +S
Sbjct: 341 SLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSV 400
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ + A+I+G + +A+ +F + ++ P+ +T+ S+L G L L G ++H
Sbjct: 401 DVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELH 460
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+IIK GFD+ + A++ MYAKC + A +F L K D VSWNS+I C Q +
Sbjct: 461 GFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKR-DIVSWNSMITRCAQSDNP 519
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
+F +M S I D ++ + + ACA + S +H ++ K LA DV+ + L
Sbjct: 520 SAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTL 579
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM-RSLGVSPN 501
+D+Y KCG+L +A +F+ M+ ++VSW+S+I Y G ++L LF M G P+
Sbjct: 580 IDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPD 639
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
+T + +++ C HVG V+EG+ +R M +YGI P +EH +CVVDL RAG + EA + +
Sbjct: 640 QITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETV 699
Query: 562 NQMACDADIVVWKSLLAS 579
M D VW +LL +
Sbjct: 700 KSMPFPPDAGVWGTLLGA 717
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 137/587 (23%), Positives = 258/587 (43%), Gaps = 46/587 (7%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P + L+ CS+L L+ G++VH +++++ D IL MY CGS + F
Sbjct: 31 PRRLSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFY 90
Query: 95 KMPQR--NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
++ R ++ W ++I+ + N A+ Y +ML GV P TF ++KAC L +
Sbjct: 91 RLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF 150
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
L V + ++LI Y ++ +I A +F + +KD W M+ +
Sbjct: 151 KGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGY 210
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------ 254
+K G + F+ ++ PN F V S C++ I
Sbjct: 211 AKCGASDSVIKGFS-LMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFE 269
Query: 255 ----------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
LF + D +WN +I+G E++ F EM
Sbjct: 270 GSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMIS 329
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+LPD +T SLL + L Q+H YI++ ++ + +A++ Y KC +
Sbjct: 330 SGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSM 389
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A +F + + D V + ++I+ L + + +F ++ +I P+ IT ++
Sbjct: 390 AQKIFSQC-NSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIG 448
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+ +L++ +LH +I K G + ++D+Y KCG + A ++F + D+VSW+S
Sbjct: 449 GLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNS 508
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
+I AQ A+ +F +M G+ + V++ L+AC+++ G ++ M
Sbjct: 509 MITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHS 568
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ S ++D+ A+ G + A + + M + +IV W S++A+
Sbjct: 569 LALDVYSE-STLIDMYAKCGNLKAAMNVFDTMK-EKNIVSWNSIIAA 613
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 139/287 (48%), Gaps = 5/287 (1%)
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
E LP L++ LL C L QG QVH+++I + IL MYA C N
Sbjct: 27 EETLPRRLSL--LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSN 84
Query: 353 ALLVFKELGKNADSV-SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+F L S+ WNSII++ ++ + + +ML + PD TF ++ AC
Sbjct: 85 CGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 144
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ + + + L ++ G+ + FV + L+ Y++ G + A KLF+ + D V W+
Sbjct: 145 VALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWN 204
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
++ GYA+ G D +K F+ MR +SPN VT VL+ C+ L++ G+ L+ ++
Sbjct: 205 VMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS 264
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G+ + ++ + ++ G +A M+ AD V W +++
Sbjct: 265 -GLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMS-RADTVTWNCMIS 309
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 165/589 (28%), Positives = 291/589 (49%), Gaps = 45/589 (7%)
Query: 34 RPST--YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+P T + L+ CSS +++ GR+VH H+ + + ++ H++ MY +CGS+ +A+
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
F+ + +++V +WT MI Q + A+ ++ QM + VMP + T+ +I+ AC+ S
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ G ++H +++ + ALI MY K + A + F + +DV SW +MIAA
Sbjct: 122 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 181
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
+ A + M G PN+ +VF+A +
Sbjct: 182 CVQHDQFALARWLYRRMQLDGVV-PNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMES 240
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
AR LF ++ D+ +WN +I + N EA+ LF ++
Sbjct: 241 DVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQ 300
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ + +T +L +L +G +H + + G+D +V V A++++Y +C
Sbjct: 301 QDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPG 360
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A +F ++G + D ++W + A Q+ +E +LF M +P T V+ C
Sbjct: 361 QAWKIFVDMG-SKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTC 419
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
A +A+L+ Q+H +I + G ++ V L+++Y KCG + AR +F M D++ W+
Sbjct: 420 AHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWN 479
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
S++ YAQ G DE L+LF +M+ G + V+ V VL+A SH G V +G + M +
Sbjct: 480 SMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQD 539
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA-CDADIVVWKSLLAS 579
+ I PT E CVVDLL RAG + EA D + +++ C D ++W +LL +
Sbjct: 540 FSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGA 588
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 158/305 (51%), Gaps = 14/305 (4%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
+ EA+ + Q + I+ T+ +++ +SL SL G+ +H+ + + DVV+
Sbjct: 289 FGEAVRLFGRLQQD-GIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVAT 347
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
++++YG+C + A F M ++V++WT M +QN +A++L+ +M G P
Sbjct: 348 ALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRP 407
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
T +++ C+ L ++ GRQ+H+H+I++ ++ + ALI MY K ++ +AR+VF
Sbjct: 408 TSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVF 467
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---- 250
+A++D+ W SM+ A+++ GY E L FN+M G + + F SV SA S+
Sbjct: 468 EKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGE-KADAVSFVSVLSALSHSGSV 526
Query: 251 ------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
F +L + +P + ++ + EA+ + ++ LPDG+ +
Sbjct: 527 TDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSG--CLPDGILWMT 584
Query: 305 LLCAC 309
LL AC
Sbjct: 585 LLGAC 589
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 161/363 (44%), Gaps = 49/363 (13%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
+ DV + N +NM+G G L DAR F+ M R+VV+W +I QN +A++L+ +
Sbjct: 239 ESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGR 298
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
+ Q G+ TF ++ + L S+ G+ +H V ++ + ++ AL+++Y + +
Sbjct: 299 LQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEA 358
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
A +F + KDV +W M A+++ G+ EAL F EM G +P +V
Sbjct: 359 PGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGR-RPTSATLVAVLD 417
Query: 247 ACSNFA----------------------------------------RILFNEIDSPDLAS 266
C++ A R +F ++ D+
Sbjct: 418 TCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILV 477
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WN+++ A H +E + LF++M+ D ++ S+L A ++ G Q Y +
Sbjct: 478 WNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQ---YFV 534
Query: 327 KMGFDSNV----PVCNAILTMYAKCSVLCNAL-LVFKELGKNADSVSWNSIIAACLQHNQ 381
M D ++ + ++ + + + A+ +V K G D + W +++ AC HN+
Sbjct: 535 AMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNK 594
Query: 382 AEE 384
++
Sbjct: 595 TDQ 597
>gi|255562850|ref|XP_002522430.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538315|gb|EEF39922.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 556
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 166/533 (31%), Positives = 267/533 (50%), Gaps = 52/533 (9%)
Query: 43 SACSSLRSLQLGRKVHDHILLSKCQPDVVLQ----NHILNMYGKCGSLEDARMGFDKMPQ 98
S C+ R L + V ++ L K QP ++ N L K G L+DAR FD+MP
Sbjct: 18 STCTDYRDLSVAYSVPNN-LSHKTQPSNLINMLEINSKLKALVKTGCLQDARQMFDEMPH 76
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG----QFTFGSIIKACSGLGSVCL 154
R+ +SWT +I+G +A+ L+ +M V+PG F +K C +
Sbjct: 77 RDEISWTTIISGYVNAIDTTEALTLFSKMW---VVPGLRMDPFILSLALKICGLSLNESY 133
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G LH + +KS+ + +AL+ MY KFD+I +F + ++V SW ++I F
Sbjct: 134 GESLHGYSVKSDFVDSVFVGSALVDMYMKFDKIQQGCQIFHAMPIRNVVSWTAIITGFVH 193
Query: 215 LGYELEALCHFNEM------------------------LHHG----------AYQPNEFI 240
GY E L +F++M L HG + + + F+
Sbjct: 194 AGYSKEGLVYFSQMWRSKVVCDSYTFAIALKACANLGALDHGRQIHCQALKRSLEASSFV 253
Query: 241 ---FGSVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
++++ C ++ LF ++ ++ SW +I A+ F M++ +
Sbjct: 254 ANTLATMYNKCGKLDYGSRLFEKMTIRNVVSWTMIITTYTQSGQEENALRAFIRMQEIGV 313
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ T +++ C G Q+H +++ +G + + V N+++T+Y+KC L +A +
Sbjct: 314 SPNDFTFAAVISGCANLGKTEWGEQLHGHMLCLGLMTFLSVANSVITLYSKCGQLKSASM 373
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VFKEL + D VSW++IIA Q AEE F SRM KP+ +T V+ C MA
Sbjct: 374 VFKELTRR-DVVSWSTIIAGYSQGGCAEEAFEYLSRMRREGPKPNELTLASVLSVCGNMA 432
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
LE QLH + GL + + L+++Y KCGS+ A K+F+ EN D+VSW+++I
Sbjct: 433 ILEQGKQLHAHALHVGLEQTAMIQSALINMYSKCGSIKEASKIFDEAENNDIVSWTAMIN 492
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
GYA+ GC EA+ LF ++ +G+ P+ VT +GVLTACSH GLV+ G H + M
Sbjct: 493 GYAEHGCRQEAIDLFEKIPRIGLKPDPVTFIGVLTACSHAGLVDLGFHYFNSM 545
>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
Length = 1359
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 173/569 (30%), Positives = 288/569 (50%), Gaps = 45/569 (7%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-NVVSWTAMIAGCS 112
G+++H ++L + D L+ +++MY K G DA F ++ + NVV W MI G
Sbjct: 688 GKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFG 747
Query: 113 QNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
+ +++LY+ + V +F + ACS + GRQ+H V+K +
Sbjct: 748 GSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPY 807
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
+L++MY+K + +A VFS + K + W +M+AA+ + AL F M
Sbjct: 808 VSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFM-RQK 866
Query: 233 AYQPNEFIFGSVFSACSNF----------------------------------------A 252
+ P+ F +V S CS F A
Sbjct: 867 SVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDA 926
Query: 253 RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE--LLPDGLTVHSLLCACI 310
++F ++ D+ +W +LI+G+ + EA+ +F +M+D + L PD + S++ AC
Sbjct: 927 YLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACA 986
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
G L G+QVH +IK G NV V ++++ +Y+KC + AL VF + + + V+WN
Sbjct: 987 GLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSM-RPENIVAWN 1045
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
S+I+ ++N E LF+ ML+ I PD ++ V+ A + ASL LH Y +
Sbjct: 1046 SMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRL 1105
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
G+ D + N L+D+Y+KCG A +F M++ +++W+ +I GY G AL LF
Sbjct: 1106 GIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLF 1165
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
++ G +P+ VT + +++AC+H G VEEG + + IM+ +YGI P EH + +VDLL R
Sbjct: 1166 DELKKAGETPDDVTFLSLISACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGR 1225
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
AG + EA FI M +AD +W LL++
Sbjct: 1226 AGRLEEAYSFIKAMPTEADSSIWLCLLSA 1254
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 173/624 (27%), Positives = 290/624 (46%), Gaps = 60/624 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + +L ++ Y +AL Y ++ + T+ L+ ACSSL +L G+ +H I+
Sbjct: 529 NSGIRALIQKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTIHGSII 588
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ-----RNVVSWTAMIAGCSQNYQE 117
+ + D + ++NMY KCG L+ A FD Q R+V +MI G + +
Sbjct: 589 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFRRF 648
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL--GRQLHAHVIKSEHGSHLIAQN 175
+ + + +ML GV P F+ ++ G+ G+Q+H +++++ +
Sbjct: 649 KEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFLKT 708
Query: 176 ALIAMYTKFDRILDARNVFSGIARK-DVTSWGSMIAAFS-----KLGYELEALCHFNEML 229
ALI MY KF DA VF I K +V W MI F + EL L N +
Sbjct: 709 ALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAKSNSVK 768
Query: 230 -----HHGAY----QPNEFIFG-----------------------SVFSACSNF--ARIL 255
GA Q FG S++S C A +
Sbjct: 769 LVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETV 828
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F+ + L WNA++A + N A+ LF MR + +LPD T+ +++ +C L
Sbjct: 829 FSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVI-SCCSMFGL 887
Query: 316 YQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
Y G VH+ + K S + +A+LT+Y+KC +A LVFK + + D V+W S+I+
Sbjct: 888 YDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSM-EEKDMVAWGSLIS 946
Query: 375 ACLQHNQAEELFRLFSRMLASQ--IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
++ + +E ++F M +KPD V+ ACA + +L Q+H + KTG
Sbjct: 947 GLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQ 1006
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
+VFV + L+D+Y KCG A K+F M ++V+W+S+I Y++ + +++LF
Sbjct: 1007 VLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNL 1066
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHC-SCVVDLLA 549
M S G+ P+ V++ VL A S + +G LH Y + IP+ H + ++D+
Sbjct: 1067 MLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLG----IPSDTHLKNALIDMYV 1122
Query: 550 RAGCVHEAEDFINQMACDADIVVW 573
+ G AE+ +M ++ W
Sbjct: 1123 KCGFSKYAENIFKKMQ-HKSLITW 1145
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 203/435 (46%), Gaps = 43/435 (9%)
Query: 18 ALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHIL 77
+L Y +++N+ +++ +++ G + ACS + GR++H ++ D + +L
Sbjct: 755 SLELYMLAKSNS-VKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLL 813
Query: 78 NMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQF 137
+MY KCG + +A F + + + W AM+A +N A++L+ M Q V+P F
Sbjct: 814 SMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSF 873
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
T ++I CS G G+ +HA + K S ++AL+ +Y+K DA VF +
Sbjct: 874 TLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSM 933
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEML-HHGAYQPNEFIFGSVFSACSNFARI-- 254
KD+ +WGS+I+ K G EAL F +M + +P+ I SV +AC+ +
Sbjct: 934 EEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSF 993
Query: 255 --------------------------------------LFNEIDSPDLASWNALIAGVAS 276
+F + ++ +WN++I+ +
Sbjct: 994 GLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSR 1053
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
++ ++ LF+ M + + PD +++ S+L A +L +G +H Y +++G S+ +
Sbjct: 1054 NNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHL 1113
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
NA++ MY KC A +FK++ ++ ++WN +I H LF + +
Sbjct: 1114 KNALIDMYVKCGFSKYAENIFKKM-QHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAG 1172
Query: 397 IKPDHITFNDVMGAC 411
PD +TF ++ AC
Sbjct: 1173 ETPDDVTFLSLISAC 1187
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 144/600 (24%), Positives = 249/600 (41%), Gaps = 78/600 (13%)
Query: 53 LGRKVHDHILLSKCQPDVVLQNHILNMYGK------------CGSLEDARMGFDKMPQRN 100
L R ++ I+ ++C+ + ++ N Y + CG D R + R
Sbjct: 454 LTRNINVSIVKTRCRFKIQVKRFTTNAYQQKSKPSLEIKIVFCGDDADMRFKLHDVHIRR 513
Query: 101 VVSWTA--MIAGCSQN------YQENDAIK-LYIQMLQSGVMP---GQFTFGSIIKACSG 148
+S A I+ S N Q+ + ++ L++ G P FTF S++KACS
Sbjct: 514 RLSRLADSYISPASVNSGIRALIQKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSS 573
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF-----SGIARKDVT 203
L ++ G+ +H +I +L+ MY K + A VF SG++ +DVT
Sbjct: 574 LTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVT 633
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF---IFGSVFSACSNFAR------- 253
SMI + K E + F ML G +P+ F I SV NF R
Sbjct: 634 VCNSMIDGYFKFRRFKEGVGCFRRMLVLGV-RPDAFSLSIVVSVLCKEGNFRREDGKQIH 692
Query: 254 --------------------------------ILFNEI-DSPDLASWNALIAGVASHSNA 280
+F EI D ++ WN +I G
Sbjct: 693 GYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEIC 752
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
++ L+ + + + L AC G Q+H ++KMG D++ V ++
Sbjct: 753 ESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSL 812
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
L+MY+KC ++ A VF + + WN+++AA ++++ LF M + PD
Sbjct: 813 LSMYSKCGMVGEAETVFSCVVDKRLEI-WNAMVAAYVENDNGYSALELFGFMRQKSVLPD 871
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T ++V+ C+ + +H + K + + + L+ +Y KCG A +F
Sbjct: 872 SFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFK 931
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR--SLGVSPNLVTLVGVLTACSHVGLV 518
ME D+V+W SLI G + G EALK+F M+ + P+ + V+ AC+ + +
Sbjct: 932 SMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEAL 991
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
GL ++ M + G + S ++DL ++ G A M + +IV W S+++
Sbjct: 992 SFGLQVHGSM-IKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPE-NIVAWNSMIS 1049
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 125/246 (50%), Gaps = 2/246 (0%)
Query: 6 VSSLCKQNLYNEALVAY-DFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLS 64
+S LCK + EAL + D ++ +++ +I+AC+ L +L G +VH ++ +
Sbjct: 945 ISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKT 1004
Query: 65 KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
+V + + ++++Y KCG E A F M N+V+W +MI+ S+N +I+L+
Sbjct: 1005 GQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELF 1064
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
ML G+ P + S++ A S S+ G+ LH + ++ S +NALI MY K
Sbjct: 1065 NLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKC 1124
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
A N+F + K + +W MI + G AL F+E+ G P++ F S+
Sbjct: 1125 GFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGE-TPDDVTFLSL 1183
Query: 245 FSACSN 250
SAC++
Sbjct: 1184 ISACNH 1189
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 152/334 (45%), Gaps = 32/334 (9%)
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMR-DRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
AS N+ I + +A+ L+++ L T SLL AC L G +H
Sbjct: 526 ASVNSGIRALIQKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTIHG 585
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF---KELGKNADSVSW-NSIIAACLQH 379
II +G+ + + +++ MY KC L A+ VF + G +A V+ NS+I +
Sbjct: 586 SIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKF 645
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL--EMVTQLHCYITKTGLAFDVF 437
+ +E F RML ++PD + + V+ K + E Q+H Y+ + L D F
Sbjct: 646 RRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSF 705
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENP-DVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
+ L+D+Y K G A ++F +E+ +VV W+ +I+G+ + +L+L+ +S
Sbjct: 706 LKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAKSN 765
Query: 497 GVSPNLVTLVGVLTACS-----------HVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
V + G L ACS H +V+ GL +N+ + + ++
Sbjct: 766 SVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGL------DNDPYV------STSLL 813
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++ G V EAE + D + +W +++A+
Sbjct: 814 SMYSKCGMVGEAETVFS-CVVDKRLEIWNAMVAA 846
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 181/607 (29%), Positives = 299/607 (49%), Gaps = 54/607 (8%)
Query: 19 LVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILL-----SKCQPDVVLQ 73
L+ + Q++ I +++ L S +L R +H +L+ C
Sbjct: 15 LITFTRQQHSLPIHFTVTSFHRL----KSPPNLHEARTLHALLLVLGFFQPTCPHSSSFA 70
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
+ ++N+Y GSL+ A + F +P + +++W A++ G AI Y MLQ GV
Sbjct: 71 SQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVT 130
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P +T+ ++KACS L ++ LGR +H + + +++ Q A+I M+ K + DAR +
Sbjct: 131 PDNYTYPLVLKACSSLHALQLGRWVH-ETMHGKTKANVYVQCAVIDMFAKCGSVEDARRM 189
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-- 251
F + +D+ SW ++I G LEAL F +M G P+ I S+ AC
Sbjct: 190 FEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEG-LMPDSVIVASILPACGRLEA 248
Query: 252 --------------------------------------ARILFNEIDSPDLASWNALIAG 273
A +F+ + D+ SW+ LIAG
Sbjct: 249 VKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAG 308
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY-QGMQVHSYIIKMGFDS 332
+ + E+ L+ M + L + + S+L A +G+L L QG ++H++++K G S
Sbjct: 309 YSQNCLYQESYKLYIGMINVGLATNAIVATSVLPA-LGKLELLKQGKEMHNFVLKEGLMS 367
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
+V V +A++ MYA C + A +F E + D + WNS+I E F F R+
Sbjct: 368 DVVVGSALIVMYANCGSIKEAESIF-ECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRI 426
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
++ +P+ IT ++ C +M +L ++H Y+TK+GL +V V N L+D+Y KCG L
Sbjct: 427 WGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFL 486
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
K+F M +V +++++I G G++ L + +M+ G PN VT + +L+AC
Sbjct: 487 ELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSAC 546
Query: 513 SHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
SH GL++ G LY M N+YGI P EH SC+VDL+ RAG + A FI +M D V
Sbjct: 547 SHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANV 606
Query: 573 WKSLLAS 579
+ SLL +
Sbjct: 607 FGSLLGA 613
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 180/404 (44%), Gaps = 46/404 (11%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A ++ AC L +++LG + + S + D+ + N +++MY KCG +A F M
Sbjct: 237 ASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVY 296
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+VVSW+ +IAG SQN ++ KLYI M+ G+ S++ A L + G+++
Sbjct: 297 SDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEM 356
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H V+K S ++ +ALI MY I +A ++F + KD+ W SMI ++ +G
Sbjct: 357 HNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDF 416
Query: 219 LEALCHFNEMLHHGA-YQPNEFIFGSVFSACSNFARI----------------------- 254
A F + GA ++PN S+ C+ +
Sbjct: 417 ESAFFTFRRIW--GAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGN 474
Query: 255 -----------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
+F ++ ++ ++N +I+ SH + ++ + +M++ P
Sbjct: 475 SLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRP 534
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLV 356
+ +T SLL AC L +G +++ +I G + N+ + ++ + + L A
Sbjct: 535 NKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKF 594
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+ D+ + S++ AC HN+ E L R+L Q+K D
Sbjct: 595 ITRMPMTPDANVFGSLLGACRLHNKVELTELLAERIL--QLKAD 636
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 146/306 (47%), Gaps = 15/306 (4%)
Query: 14 LYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQ 73
LY E+ Y N + ++ A L L+ G+++H+ +L DVV+
Sbjct: 314 LYQESYKLY-IGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVG 372
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
+ ++ MY CGS+++A F+ ++++ W +MI G + A + ++ +
Sbjct: 373 SALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHR 432
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P T SI+ C+ +G++ G+++H +V KS G ++ N+LI MY+K + V
Sbjct: 433 PNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKV 492
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---- 249
F + ++VT++ +MI+A G + L + +M G +PN+ F S+ SACS
Sbjct: 493 FKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGN-RPNKVTFISLLSACSHAGL 551
Query: 250 -NFARILFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
+ +L+N + + P++ ++ ++ + + + A + M + PD
Sbjct: 552 LDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRM---PMTPDANVFG 608
Query: 304 SLLCAC 309
SLL AC
Sbjct: 609 SLLGAC 614
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 173/550 (31%), Positives = 284/550 (51%), Gaps = 55/550 (10%)
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN--DAIKLYIQMLQSGVMPGQFTFGS 141
G L A FD++P +V ++ +I S + D + LY +ML+ V P +TF
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
+KACS L GR +H H I + + L AL+ MY K + DA ++F+ + +D
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEM--------------------------LHHG--- 232
+ +W +M+A ++ G A+ H M L G
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 233 -AY------QPNE---------FIFGS----VFSACSN--FARILFNEIDSPDLASWNAL 270
AY PN + G+ +++ C + +AR +F+ + + + +W+AL
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 271 IAGVASHSNANEAMSLFSEMRDREL-LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
I G S +A LF M + L ++ S L AC L G Q+H+ + K G
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
+++ N++L+MYAK ++ A+ +F E+ D+VS++++++ +Q+ +AEE F +F
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSGYVQNGRAEEAFLVF 429
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
+M A ++PD T ++ AC+ +A+L+ H + GLA + + N L+D+Y KC
Sbjct: 430 KKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKC 489
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
G + +R++FN M + D+VSW+++I GY G G EA LF M +LG P+ VT + +L
Sbjct: 490 GRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLL 549
Query: 510 TACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
+ACSH GLV EG H + +M + YG+ P EH C+VDLL+R G + EA +FI M AD
Sbjct: 550 SACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRAD 609
Query: 570 IVVWKSLLAS 579
+ VW +LL +
Sbjct: 610 VRVWVALLGA 619
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 145/561 (25%), Positives = 236/561 (42%), Gaps = 65/561 (11%)
Query: 32 RIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
R+ P+ T+ + ACS+L GR +H H + + Q D+ + +L+MY KC L DA
Sbjct: 120 RVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDA 179
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQN--YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
F MP R++V+W AM+AG + + Y A L +QM + P T +++ +
Sbjct: 180 AHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLA 239
Query: 148 GLGSVCLGRQLHAHVI----------KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
G++ G +HA+ I KS+ ++ AL+ MY K +L AR VF +
Sbjct: 240 QQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM 299
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--- 254
++ +W ++I F +A F ML G + S AC++ +
Sbjct: 300 PARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMG 359
Query: 255 -------------------------------------LFNEIDSPDLASWNALIAGVASH 277
LF+E+ D S++AL++G +
Sbjct: 360 EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQN 419
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
A EA +F +M+ + PD T+ SL+ AC L G H +I G S +C
Sbjct: 420 GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC 479
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
NA++ MYAKC + + VF + + D VSWN++IA H +E LF M
Sbjct: 480 NALIDMYAKCGRIDLSRQVFNMM-PSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGF 538
Query: 398 KPDHITFNDVMGACAKMA-SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
PD +TF ++ AC+ +E H GL + ++D+ + G L A
Sbjct: 539 PPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAY 598
Query: 457 KLFNFME-NPDVVSWSSLILG---YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
+ M DV W +L+ Y G + ++ + G N V L + +A
Sbjct: 599 EFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTG-NFVLLSNIYSA- 656
Query: 513 SHVGLVEEGLHLYRIMENEYG 533
G +E + RI++ G
Sbjct: 657 --AGRFDEAAEV-RIIQKVQG 674
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VS + EA + + Q N+ +T LI ACS L +LQ GR H +++
Sbjct: 413 VSGYVQNGRAEEAFLVFKKMQA-CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 471
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ + N +++MY KCG ++ +R F+ MP R++VSW MIAG + +A L++
Sbjct: 472 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 531
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG-----SHLIAQNALIAM 180
+M G P TF ++ ACS G V G+ HV+ +G H I L++
Sbjct: 532 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWF-HVMGHGYGLTPRMEHYICMVDLLSR 590
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
D + + S R DV W +++ A
Sbjct: 591 GGFLDEAYEF--IQSMPLRADVRVWVALLGA 619
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 175/522 (33%), Positives = 268/522 (51%), Gaps = 44/522 (8%)
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
V W + I + A+ L+ QM Q+G+ P TF S+ KACS L ++ + +H
Sbjct: 18 TVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVH 77
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
HV+KS + L Q +++ MY K ++ A N+FS + ++DV SW SMI F++LG+
Sbjct: 78 THVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVD 137
Query: 220 EALCHFNEM--------------LHHGAYQPNEFI-------FG---------------- 242
+ F EM L H A + FG
Sbjct: 138 RVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWI 197
Query: 243 SVFSACSNF--ARILFNEIDS--PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
+ ++ C F A +F+ ID SWN++IAG A ++A+ F +M D
Sbjct: 198 AAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRAD 257
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
T+ SLL +C+ L+ G +H++ I++G DS++ V N +++MY+KC + +A +F
Sbjct: 258 LSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFD 317
Query: 359 E-LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
LGK VSW ++IA + +E LFS M A KPD +T +M C + +L
Sbjct: 318 NMLGKT--RVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGAL 375
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
E+ + Y T GL ++ V N L+D+Y KCGS+ +AR+LF M +VSW++LI G
Sbjct: 376 ELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGC 435
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
A G EAL LF +M LG+ PN +T + VL AC+H G +E+G + +M Y I P
Sbjct: 436 ALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPG 495
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H SC+ DLL R G + EA +FI M D+ +W LL++
Sbjct: 496 LDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSA 537
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 151/524 (28%), Positives = 240/524 (45%), Gaps = 63/524 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N ++ Q ++AL+ + + N + P+ T+ + ACS L +L+ + VH H
Sbjct: 23 NSSITESVNQGYAHKALLLFRQMKQNG---LEPNNLTFPSVAKACSKLLNLKYSQIVHTH 79
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
++ S+ Q D+ +Q +++MY KC L A F +MP+R+V SW +MI G +Q +
Sbjct: 80 VVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVDRV 139
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ L+ +M G+ T + + L + + +H+ IK + + N IA
Sbjct: 140 VSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAA 199
Query: 181 YTKFDRILDARNVFSGIAR--KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG------ 232
Y K A VF GI + K SW SMIA ++ +A+ F +ML G
Sbjct: 200 YAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRADLS 259
Query: 233 --------AYQPNEFIFG-----------------------SVFSACSNF--ARILFNEI 259
QP G S++S C + AR LF+ +
Sbjct: 260 TILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNM 319
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
SW A+IAG A + +EAM+LFS M PD +T+ SL+ C L G
Sbjct: 320 LGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGK 379
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+ +Y G N+ VCNA++ +YAKC + NA +F + + + VSW ++IA C +
Sbjct: 380 WIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKS-LVSWTTLIAGCALN 438
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+ +E LF +M+ +KP+HITF V+ AC LE + +TK V+ +
Sbjct: 439 GEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTK------VYKI 492
Query: 440 NGLMDIYIKC-----GSLGSARKLFNFMEN----PDVVSWSSLI 474
N +D Y C G G ++ F F++N PDV WS L+
Sbjct: 493 NPGLDHY-SCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLL 535
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 169/550 (30%), Positives = 280/550 (50%), Gaps = 55/550 (10%)
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN--DAIKLYIQMLQSGVMPGQFTFGS 141
G L A FD++P +V ++ +I S + D + LY +ML+ V P +TF
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
+KACS L GR +H H I + + L AL+ MY K + DA ++F+ + +D
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEM--------------------------------- 228
+ +W +M+A ++ G A+ H M
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 229 --------LHHGAYQPNEFIFG--------SVFSACSN--FARILFNEIDSPDLASWNAL 270
LH ++ G +++ C + +AR +F+ + + + +W+AL
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 271 IAGVASHSNANEAMSLFSEMRDREL-LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
I G S +A LF M + L ++ S L AC L G Q+H+ + K G
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
+++ N++L+MYAK ++ A+ +F E+ D+VS++++++ +Q+ +AEE F +F
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSGYVQNGRAEEAFLVF 429
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
+M A ++PD T ++ AC+ +A+L+ H + GLA + + N L+D+Y KC
Sbjct: 430 KKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKC 489
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
G + +R++FN M + D+VSW+++I GY G G EA LF M +LG P+ VT + +L
Sbjct: 490 GRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLL 549
Query: 510 TACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
+ACSH GLV EG H + +M + YG+ P EH C+VDLL+R G + EA +FI M AD
Sbjct: 550 SACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRAD 609
Query: 570 IVVWKSLLAS 579
+ VW +LL +
Sbjct: 610 VRVWVALLGA 619
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 140/539 (25%), Positives = 227/539 (42%), Gaps = 61/539 (11%)
Query: 32 RIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
R+ P+ T+ + ACS+L GR +H H + + Q D+ + +L+MY KC L DA
Sbjct: 120 RVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDA 179
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQN--YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
F MP R++V+W AM+AG + + Y A L +QM + P T +++ +
Sbjct: 180 AHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLA 239
Query: 148 GLGSVCLGRQLHAHVI----------KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
G++ G +HA+ I KS+ ++ AL+ MY K +L AR VF +
Sbjct: 240 QQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM 299
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--- 254
++ +W ++I F +A F ML G + S AC++ +
Sbjct: 300 PARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMG 359
Query: 255 -------------------------------------LFNEIDSPDLASWNALIAGVASH 277
LF+E+ D S++AL++G +
Sbjct: 360 EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQN 419
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
A EA +F +M+ + PD T+ SL+ AC L G H +I G S +C
Sbjct: 420 GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC 479
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
NA++ MYAKC + + VF + + D VSWN++IA H +E LF M
Sbjct: 480 NALIDMYAKCGRIDLSRQVFNMM-PSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGF 538
Query: 398 KPDHITFNDVMGACAKMA-SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
PD +TF ++ AC+ +E H GL + ++D+ + G L A
Sbjct: 539 PPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAY 598
Query: 457 KLFNFME-NPDVVSWSSLILG---YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+ M DV W +L+ Y G + ++ + G N V L + +A
Sbjct: 599 EFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTG-NFVLLSNIYSA 656
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 9/211 (4%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VS + EA + + Q N+ +T LI ACS L +LQ GR H +++
Sbjct: 413 VSGYVQNGRAEEAFLVFKKMQA-CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 471
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ + N +++MY KCG ++ +R F+ MP R++VSW MIAG + +A L++
Sbjct: 472 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 531
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG-----SHLIAQNALIAM 180
+M G P TF ++ ACS G V G+ HV++ +G H I L++
Sbjct: 532 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWF-HVMRHGYGLTPRMEHYICMVDLLSR 590
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
D + + S R DV W +++ A
Sbjct: 591 GGFLDEAYEF--IQSMPLRADVRVWVALLGA 619
>gi|347954532|gb|AEP33766.1| organelle transcript processing 82, partial [Lepidium virginicum]
Length = 464
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 149/467 (31%), Positives = 248/467 (53%), Gaps = 34/467 (7%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F+ + + N++ W M G + N A+KLY+ M+ G++P ++F ++K+C+ +
Sbjct: 30 FETIEEPNLLIWNTMFRGHALNSDSVSALKLYVCMISLGLLPNSYSFPFLLKSCAKSKAF 89
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+Q+H HV+K + + +LI+MY + R+ DA VF + + V S+ ++I +
Sbjct: 90 REGQQIHGHVVKLGYDLDMYVHTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGY 149
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
+ GY + AR LF+EI D+ SWNA+I+
Sbjct: 150 ASRGY-------------------------------TKSARKLFDEILVKDIVSWNAMIS 178
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G N EA+ L+ EM + PD T+ +++ AC + G QVHS I GF S
Sbjct: 179 GYVETFNYKEALELYKEMVKTNVKPDESTMVTVVSACAQSSNIELGRQVHSLIEDHGFGS 238
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N+ V NA++ MY+KC + A +F+ L N D++SWN++I N +E LF M
Sbjct: 239 NLKVVNALMDMYSKCGEMETACRLFQGL-VNKDAISWNTLIGGHTHMNLYKEALFLFQEM 297
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFDVFVMNGLMDIYIKCG 450
L S P+ +T V+ ACA + ++++ +H YI K G+ + L+D+Y KCG
Sbjct: 298 LRSGESPNDVTMLSVLSACAHLGAIDIGRWIHVYIDKRLKGVTNSSSLRTSLIDMYAKCG 357
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ +A ++F+ M + SW+++I G+A G + A LF++MR G+ P+ +T VG+L+
Sbjct: 358 DIEAASQVFDSMLARSLSSWNAMIFGFAMHGKANAAFDLFSKMRKSGIEPDDITFVGLLS 417
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
ACSH G+++ G H++ M +Y I P EH C++DLL + EA
Sbjct: 418 ACSHSGMLDLGRHIFSSMTQDYKITPKLEHYGCMIDLLGQCALFKEA 464
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 182/346 (52%), Gaps = 33/346 (9%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+A +F I+ P+L WN + G A +S++ A+ L+ M LLP+ + LL +C
Sbjct: 25 YAISVFETIEEPNLLIWNTMFRGHALNSDSVSALKLYVCMISLGLLPNSYSFPFLLKSCA 84
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF------------- 357
+G Q+H +++K+G+D ++ V ++++MYA+ L +A VF
Sbjct: 85 KSKAFREGQQIHGHVVKLGYDLDMYVHTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTA 144
Query: 358 -------KELGKNA----------DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+ K+A D VSWN++I+ ++ +E L+ M+ + +KPD
Sbjct: 145 LITGYASRGYTKSARKLFDEILVKDIVSWNAMISGYVETFNYKEALELYKEMVKTNVKPD 204
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T V+ ACA+ +++E+ Q+H I G ++ V+N LMD+Y KCG + +A +LF
Sbjct: 205 ESTMVTVVSACAQSSNIELGRQVHSLIEDHGFGSNLKVVNALMDMYSKCGEMETACRLFQ 264
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
+ N D +SW++LI G+ EAL LF M G SPN VT++ VL+AC+H+G ++
Sbjct: 265 GLVNKDAISWNTLIGGHTHMNLYKEALFLFQEMLRSGESPNDVTMLSVLSACAHLGAIDI 324
Query: 521 G--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
G +H+Y I + G+ + + ++D+ A+ G + A + M
Sbjct: 325 GRWIHVY-IDKRLKGVTNSSSLRTSLIDMYAKCGDIEAASQVFDSM 369
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 162/350 (46%), Gaps = 76/350 (21%)
Query: 35 PSTYAG--LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
P++Y+ L+ +C+ ++ + G+++H H++ D+ + +++MY + G LEDA
Sbjct: 71 PNSYSFPFLLKSCAKSKAFREGQQIHGHVVKLGYDLDMYVHTSLISMYAQNGRLEDAHKV 130
Query: 93 FDKMPQRNVVS-------------------------------WTAMIAGCSQNYQENDAI 121
FD+ R+VVS W AMI+G + + +A+
Sbjct: 131 FDRSSHRHVVSYTALITGYASRGYTKSARKLFDEILVKDIVSWNAMISGYVETFNYKEAL 190
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+LY +M+++ V P + T +++ AC+ ++ LGRQ+H+ + GS+L NAL+ MY
Sbjct: 191 ELYKEMVKTNVKPDESTMVTVVSACAQSSNIELGRQVHSLIEDHGFGSNLKVVNALMDMY 250
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
+K + A +F G+ KD SW ++I + + EAL F EML G PN+
Sbjct: 251 SKCGEMETACRLFQGLVNKDAISWNTLIGGHTHMNLYKEALFLFQEMLRSGE-SPNDVTM 309
Query: 242 GSVFSACSNFARI------------------------------------------LFNEI 259
SV SAC++ I +F+ +
Sbjct: 310 LSVLSACAHLGAIDIGRWIHVYIDKRLKGVTNSSSLRTSLIDMYAKCGDIEAASQVFDSM 369
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+ L+SWNA+I G A H AN A LFS+MR + PD +T LL AC
Sbjct: 370 LARSLSSWNAMIFGFAMHGKANAAFDLFSKMRKSGIEPDDITFVGLLSAC 419
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 130/250 (52%), Gaps = 4/250 (1%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + Y EAL Y TN++ ST ++SAC+ +++LGR+VH I
Sbjct: 174 NAMISGYVETFNYKEALELYK-EMVKTNVKPDESTMVTVVSACAQSSNIELGRQVHSLIE 232
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ + N +++MY KCG +E A F + ++ +SW +I G + +A+
Sbjct: 233 DHGFGSNLKVVNALMDMYSKCGEMETACRLFQGLVNKDAISWNTLIGGHTHMNLYKEALF 292
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG--SHLIAQNALIAM 180
L+ +ML+SG P T S++ AC+ LG++ +GR +H ++ K G + + +LI M
Sbjct: 293 LFQEMLRSGESPNDVTMLSVLSACAHLGAIDIGRWIHVYIDKRLKGVTNSSSLRTSLIDM 352
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K I A VF + + ++SW +MI F+ G A F++M G +P++
Sbjct: 353 YAKCGDIEAASQVFDSMLARSLSSWNAMIFGFAMHGKANAAFDLFSKMRKSGI-EPDDIT 411
Query: 241 FGSVFSACSN 250
F + SACS+
Sbjct: 412 FVGLLSACSH 421
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 7/160 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N + NLY EAL + Q P+ T ++SAC+ L ++ +GR +H +
Sbjct: 275 NTLIGGHTHMNLYKEALFLF---QEMLRSGESPNDVTMLSVLSACAHLGAIDIGRWIHVY 331
Query: 61 I--LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
I L L+ +++MY KCG +E A FD M R++ SW AMI G + + + N
Sbjct: 332 IDKRLKGVTNSSSLRTSLIDMYAKCGDIEAASQVFDSMLARSLSSWNAMIFGFAMHGKAN 391
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
A L+ +M +SG+ P TF ++ ACS G + LGR +
Sbjct: 392 AAFDLFSKMRKSGIEPDDITFVGLLSACSHSGMLDLGRHI 431
>gi|302766259|ref|XP_002966550.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
gi|300165970|gb|EFJ32577.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
Length = 732
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 171/591 (28%), Positives = 296/591 (50%), Gaps = 53/591 (8%)
Query: 33 IRPSTYAGLISACSSLRSLQL--GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IRP+ LI+ + LR+ L GR+VH ++L + D L N +++MY K G +++A
Sbjct: 116 IRPN----LITMVAVLRACNLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEAD 171
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ +MP+R+V+SW MI+G +Q+ + ++ +M Q G+ P + T+ +++ ACS
Sbjct: 172 LVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGE 231
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ G+ +H V+ + ++ L+ MY K + D + + ++ +W ++I
Sbjct: 232 DLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIG 291
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------- 249
A+++ +AL F +M G + + F + CS
Sbjct: 292 AYARYSDHFQALRSFQQMQLQGV-KADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFE 350
Query: 250 ------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
+ AR +F + S + SWN+LI+ H +A F M+
Sbjct: 351 SIIVHNSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHGCYADAHKFFQRMK 410
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
PD +T S+L AC + +G +H +++ GFD V NA++ MYAK
Sbjct: 411 LEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHE 470
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A VF + + ++VSWN+I+AA ++ + +F +M + D +T+ + AC
Sbjct: 471 AARNVFDAMAER-NTVSWNTILAAYVEKGLNRDAVEMFWKM---DVARDKVTYVAALDAC 526
Query: 412 AKMAS-LEMVTQLHCYITKTGLA--FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
+ +A L +H Y+ G + D L+++Y KCGSL ARK+F+ M + DVV
Sbjct: 527 SGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDEMLHRDVV 586
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
+W+SLI+ YAQ ++ALKL M GV + V + +L+ C H GL+EEG + M
Sbjct: 587 TWTSLIVAYAQHSEIEQALKLVKIMEQDGVKVDDVVFLSILSGCDHSGLLEEGCKYFVSM 646
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++YGI P EH +C++D+L RAG + AE ++++ +D VW +LLA+
Sbjct: 647 IDDYGISPRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVWMTLLAA 697
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 163/592 (27%), Positives = 292/592 (49%), Gaps = 56/592 (9%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP T+ + AC+ +L GRKVH +I S + D+ N ++NMYGKC S EDA
Sbjct: 14 VRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALINMYGKCRSPEDAF 73
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQ-NYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F +M NVVSWT++I +Q + +++ L+ +M G+ P T ++++AC
Sbjct: 74 QLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRAC--- 130
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
++ GRQ+H +V+++ NAL+ MY K + +A V + ++DV SW MI
Sbjct: 131 -NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLREMPKRDVISWNIMI 189
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------NFARILFN--- 257
+ +++ G E L M G P + + ++ +ACS + R + +
Sbjct: 190 SGYAQSGDCKEGLRCLWRMQQDG-LSPTKVTYATLLNACSSGEDLGEGKSIHRSVVDMGL 248
Query: 258 ----------------------------EIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
E+ + +WN +I A +S+ +A+ F +
Sbjct: 249 DRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQ 308
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M+ + + D +T +L C L QG+ +H +I ++GF+S + V N++ MYAKC
Sbjct: 309 MQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFES-IIVHNSLTAMYAKCGS 367
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L A +F+ + + +SVSWNS+I+A +QH + + F RM +PD +T ++
Sbjct: 368 LDAARKMFEGM-PSRNSVSWNSLISAAIQHGCYADAHKFFQRMKLEGSRPDEVTCISMLD 426
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
AC K A+ + + +H + ++G V N L+ +Y K G +AR +F+ M + VS
Sbjct: 427 ACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMAERNTVS 486
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV--GLVEEGLHLYRI 527
W++++ Y + G +A+++F +M V+ + VT V L ACS + GL L +
Sbjct: 487 WNTILAAYVEKGLNRDAVEMFWKM---DVARDKVTYVAALDACSGLAGGLAHGKLIHGYM 543
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+++ + + +V++ + G + EA ++M D+V W SL+ +
Sbjct: 544 LDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDEM-LHRDVVTWTSLIVA 594
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 146/497 (29%), Positives = 244/497 (49%), Gaps = 42/497 (8%)
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
A++LY +M GV P TF + ++AC+ G++ GR++HA++ +S + + A NALI
Sbjct: 2 ALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALIN 61
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY-ELEALCHFNEMLHHGAYQPNE 238
MY K DA +FS + +V SW S+I F++ G+ E++ F +M G +PN
Sbjct: 62 MYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEG-IRPNL 120
Query: 239 FIFGSVFSACS------------------------------------NFARILFNEIDSP 262
+V AC+ + A ++ E+
Sbjct: 121 ITMVAVLRACNLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLREMPKR 180
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ SWN +I+G A + E + M+ L P +T +LL AC L +G +H
Sbjct: 181 DVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEGKSIH 240
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
++ MG D + V + +L MY KC L + E+ + ++++WN+II A +++
Sbjct: 241 RSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHER-NTIAWNTIIGAYARYSDH 299
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
+ R F +M +K D +TF ++G C+ A L LH +I++ G + V N L
Sbjct: 300 FQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFE-SIIVHNSL 358
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+Y KCGSL +ARK+F M + + VSW+SLI Q GC +A K F RM+ G P+
Sbjct: 359 TAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHGCYADAHKFFQRMKLEGSRPDE 418
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
VT + +L AC+ +EG +++ M E G + ++ + A+ G A + +
Sbjct: 419 VTCISMLDACTKQANAKEGSSIHQ-MVVESGFDKRTGVANALIFMYAKLGDHEAARNVFD 477
Query: 563 QMACDADIVVWKSLLAS 579
MA + + V W ++LA+
Sbjct: 478 AMA-ERNTVSWNTILAA 493
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 130/246 (52%), Gaps = 6/246 (2%)
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
+A+ L+ M+ + PD +T + L AC L G +VH+YI + G ++++ NA++
Sbjct: 1 QALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALI 60
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-AEELFRLFSRMLASQIKPD 400
MY KC +A +F + ++ + VSW S+I Q+ E LF +M I+P+
Sbjct: 61 NMYGKCRSPEDAFQLFSRM-ESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPN 119
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
IT V+ AC +L Q+H Y+ + G++ D + N L+D+Y K G + A +
Sbjct: 120 LITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLR 175
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
M DV+SW+ +I GYAQ G E L+ RM+ G+SP VT +L ACS + E
Sbjct: 176 EMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGE 235
Query: 521 GLHLYR 526
G ++R
Sbjct: 236 GKSIHR 241
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 173/402 (43%), Gaps = 41/402 (10%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++ T+ ++ CSS L G +HD I + +++ N + MY KCGSL+ AR
Sbjct: 314 VKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFES-IIVHNSLTAMYAKCGSLDAAR 372
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F+ MP RN VSW ++I+ Q+ DA K + +M G P + T S++ AC+
Sbjct: 373 KMFEGMPSRNSVSWNSLISAAIQHGCYADAHKFFQRMKLEGSRPDEVTCISMLDACTKQA 432
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ G +H V++S NALI MY K ARNVF +A ++ SW +++A
Sbjct: 433 NAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILA 492
Query: 211 AFSKLGYELEALCHFNEM---------------------------------LHHGAYQPN 237
A+ + G +A+ F +M L HG
Sbjct: 493 AYVEKGLNRDAVEMFWKMDVARDKVTYVAALDACSGLAGGLAHGKLIHGYMLDHGFSNRL 552
Query: 238 EFIFGS----VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
+ + + ++ C + AR +F+E+ D+ +W +LI A HS +A+ L M
Sbjct: 553 DTVAATALVNMYGKCGSLQEARKIFDEMLHRDVVTWTSLIVAYAQHSEIEQALKLVKIME 612
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVH-SYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ D + S+L C L +G + S I G + N I+ + + L
Sbjct: 613 QDGVKVDDVVFLSILSGCDHSGLLEEGCKYFVSMIDDYGISPRLEHYNCIIDVLGRAGHL 672
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
A + L +DS W +++AAC H E R R+
Sbjct: 673 DLAEKLVDRLPSRSDSKVWMTLLAACRMHGNPERGKRAARRI 714
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 113/203 (55%), Gaps = 21/203 (10%)
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
+ L+ RM ++PD +TF + AC +L+ ++H YI ++GL D++ N L+
Sbjct: 1 QALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALI 60
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG-CGDEALKLFTRMRSLGVSPNL 502
++Y KC S A +LF+ ME+P+VVSW+S+I +AQ+G G E++ LF +M G+ PNL
Sbjct: 61 NMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNL 120
Query: 503 VTLVGVLTACS-------HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
+T+V VL AC+ H ++E G+ L + N +VD+ + G V
Sbjct: 121 ITMVAVLRACNLTDGRQVHGYVLEAGMSLDTSLGN------------ALVDMYCKTGDVD 168
Query: 556 EAEDFINQMACDADIVVWKSLLA 578
EA+ + +M D++ W +++
Sbjct: 169 EADLVLREMP-KRDVISWNIMIS 190
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 171/510 (33%), Positives = 268/510 (52%), Gaps = 45/510 (8%)
Query: 112 SQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL 171
+Q + +N A+ L+ QM QSG+ P TF ++KAC+ L + + +HAHV+KS S++
Sbjct: 30 NQGHAQN-ALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAHVLKSCFQSNI 88
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH 231
Q A + MY K R+ DA NVF + +D+ SW +M+ F++ G+ C M
Sbjct: 89 FVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLSCLLRHMRLS 148
Query: 232 GAYQPNE----------------------FIFG----------------SVFSACSNF-- 251
G +P+ + FG + +S C N
Sbjct: 149 G-IRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCS 207
Query: 252 ARILFNEIDS--PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
A LF+EI+S + SWN++IA A+ +A++ + M D PD T+ +LL +C
Sbjct: 208 AETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSC 267
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSW 369
+ L+ G+ VHS+ +K+G DS+V V N ++ MY+KC + +A +F + + VSW
Sbjct: 268 MQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGM-SDKTCVSW 326
Query: 370 NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
+I+A + E LF+ M A+ KPD +T ++ C + +LE+ + Y
Sbjct: 327 TVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWIDNYSIN 386
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
GL +V V N L+D+Y KCG A++LF M N VVSW+++I A G +AL+L
Sbjct: 387 NGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALNGDVKDALEL 446
Query: 490 FTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLA 549
F M +G+ PN +T + VL AC+H GLVE GL + +M +YGI P +H SC+VDLL
Sbjct: 447 FFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDHYSCMVDLLG 506
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLLAS 579
R G + EA + I M + D +W +LL++
Sbjct: 507 RKGHLREALEIIKSMPFEPDSGIWSALLSA 536
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 153/524 (29%), Positives = 234/524 (44%), Gaps = 63/524 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N L Q AL+ + + I ST+ ++ AC+ L L+ + +H H+L
Sbjct: 22 NSNFRHLVNQGHAQNALILFR-QMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAHVL 80
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S Q ++ +Q ++MY KCG LEDA F +MP R++ SW AM+ G +Q+ +
Sbjct: 81 KSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLSC 140
Query: 123 LYIQMLQSGVMPGQFT----FGSI--IKACSGLGSV-CLGRQLHAHVIKSEHGSHLIAQN 175
L M SG+ P T SI +K+ + LG+V G ++ H+ S N
Sbjct: 141 LLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVS-------VAN 193
Query: 176 ALIAMYTKFDRILDARNVFSGI--ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG- 232
LIA Y+K + A +F I + V SW SMIAA++ ++A+ + ML G
Sbjct: 194 TLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGF 253
Query: 233 -------------AYQPNEFIFG-----------------------SVFSACSNF--ARI 254
QP G ++S C + AR
Sbjct: 254 SPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARF 313
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
LFN + SW +I+ A +EAM+LF+ M PD +TV +L+ C
Sbjct: 314 LFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGA 373
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
L G + +Y I G NV VCNA++ MYAKC +A +F + N VSW ++I
Sbjct: 374 LELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMA-NRTVVSWTTMIT 432
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY---ITKTG 431
AC + ++ LF ML +KP+HITF V+ ACA +E L C+ K G
Sbjct: 433 ACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVE--RGLECFNMMTQKYG 490
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
+ + + ++D+ + G L A ++ M PD WS+L+
Sbjct: 491 INPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALL 534
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 161/322 (50%), Gaps = 13/322 (4%)
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
L +WN+ + + +A A+ LF +M+ + P+ T +L AC L +H+
Sbjct: 18 LFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHA 77
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+++K F SN+ V A + MY KC L +A VF E+ D SWN+++ Q +
Sbjct: 78 HVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVR-DIASWNAMLLGFAQSGFLD 136
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
L L M S I+PD +T ++ + ++ SL + ++ + + G+ DV V N L+
Sbjct: 137 RLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLI 196
Query: 444 DIYIKCGSLGSARKLFNFMEN--PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
Y KCG+L SA LF+ + + VVSW+S+I YA F +A+ + M G SP+
Sbjct: 197 AAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPD 256
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLL----ARAGCVHEA 557
+ T++ +L++C + GL + + +G+ + CVV+ L ++ G VH A
Sbjct: 257 ISTILNLLSSCMQPKALFHGL-----LVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSA 311
Query: 558 EDFINQMACDADIVVWKSLLAS 579
N M+ D V W ++++
Sbjct: 312 RFLFNGMS-DKTCVSWTVMISA 332
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 147/306 (48%), Gaps = 18/306 (5%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
ST L+S+C ++L G VH H + C DV + N ++ MY KCG + AR F+
Sbjct: 258 STILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNG 317
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M + VSWT MI+ ++ ++A+ L+ M +G P T ++I C G++ LG
Sbjct: 318 MSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELG 377
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ + + I + +++ NALI MY K DA+ +F +A + V SW +MI A +
Sbjct: 378 KWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALN 437
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEID-----SPDLA 265
G +AL F ML G +PN F +V AC++ + FN + +P +
Sbjct: 438 GDVKDALELFFMMLEMGM-KPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGID 496
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
++ ++ + + EA+ + M PD +LL AC L+ M++ Y+
Sbjct: 497 HYSCMVDLLGRKGHLREALEIIKSM---PFEPDSGIWSALLSAC----KLHGKMEMGKYV 549
Query: 326 IKMGFD 331
+ F+
Sbjct: 550 SEQLFE 555
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 181/407 (44%), Gaps = 51/407 (12%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IRP T LI + ++SL V+ + DV + N ++ Y KCG+L A
Sbjct: 150 IRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAE 209
Query: 91 MGFDKMPQ--RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
FD++ R+VVSW +MIA + + A+ Y ML G P T +++ +C
Sbjct: 210 TLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQ 269
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
++ G +H+H +K S + N LI MY+K + AR +F+G++ K SW M
Sbjct: 270 PKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVM 329
Query: 209 IAAFSKLGYELEALCHFNEM--------------LHHGAYQPNEFIFGS----------- 243
I+A+++ GY EA+ FN M L G Q G
Sbjct: 330 ISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWIDNYSINNGL 389
Query: 244 ------------VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
+++ C F A+ LF + + + SW +I A + + +A+ LF
Sbjct: 390 KDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALNGDVKDALELFFM 449
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAILTMYAKCS 348
M + + P+ +T ++L AC + +G++ + + K G + + + ++ + +
Sbjct: 450 MLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDHYSCMVDLLGRKG 509
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRL 388
L AL + K + DS W+++++AC H + +E+LF L
Sbjct: 510 HLREALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFEL 556
>gi|326490736|dbj|BAJ90035.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511421|dbj|BAJ87724.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 801
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 183/595 (30%), Positives = 303/595 (50%), Gaps = 55/595 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILL-SKCQPDV-VLQNHILNMYGKC-----GSLEDA 89
TY+ ++AC+ R L+LGR VH H+L ++ PD VL+N +LN+Y C G ++
Sbjct: 102 TYSCALTACARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLNLYASCARHRRGGVDVV 161
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD MP++NVVSW + + + ++A++++ +ML+ GV P +F ++ A +G
Sbjct: 162 RRLFDAMPKKNVVSWNTLFGWYVKTGRPDEALEMFARMLEDGVRPTPVSFVNVFPA-AGS 220
Query: 150 GSVCLGRQLHAHVIKS--EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
G L+ +IK E+ + L ++ I M+++ + AR VF +K++ W +
Sbjct: 221 GDPSWPFLLYGLLIKHGVEYVNDLFVVSSAIGMFSEISDVQSARMVFDRAGKKNIEVWNT 280
Query: 208 MIAAFSKLGYELEALCHF-------------------------------NEMLH----HG 232
MI + + G +A+ F + LH G
Sbjct: 281 MITGYVQNGQFSQAMDLFIQILGSKEVPSDVVTFLSAVTAASQSQDVRLGQQLHGYLMKG 340
Query: 233 AYQPNEFIFGS----VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
+ I G+ ++S C N A LF+ + D+ SWN +I + E + L
Sbjct: 341 MHSTLPVILGNALVVMYSRCGNVQTAFELFDRLPEKDIVSWNTMITAFVQNDFDLEGLLL 400
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
+M+ +PD +T+ ++L A L G Q H Y+I+ G + + + ++ MY+K
Sbjct: 401 VYQMQKSGFIPDTVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGE-GLESYLIDMYSK 459
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
+ A VF G + D V+WN++IA Q Q E+ F M+ + ++P +T
Sbjct: 460 SGRIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLQFRAMIEAGVEPTSVTLAS 519
Query: 407 VMGACAKMAS-LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
V+ AC + + Q+H + + L +VFV L+D+Y KCG + +A +F M
Sbjct: 520 VLPACDPVGGGVCAGKQIHSFALRHSLDTNVFVGTALVDMYSKCGEISAAENVFGGMTEK 579
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
V+++++I G Q G G+ AL LF MR G+ P+ VT + ++AC++ GLV+EGL LY
Sbjct: 580 STVTYTTMISGLGQHGFGERALSLFYSMRDKGLKPDAVTFLAAISACNYSGLVDEGLSLY 639
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD-IVVWKSLLAS 579
R ME +G+ T +H C+VDLLA+AG V EA DF+ + D + I +W SLLAS
Sbjct: 640 RSMET-FGLAATPQHHCCIVDLLAKAGRVDEAYDFVESLGEDGNFIAIWGSLLAS 693
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 229/497 (46%), Gaps = 71/497 (14%)
Query: 82 KCGSLEDAR-MGFDKMPQRNV-----VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
K G LE AR + D +P+ V A +AG ++ A++LY +L P
Sbjct: 41 KQGRLEHARRLLLDALPRPPPTLLCNVLLIAYVAGALPDH----ALRLY-ALLNHAARPA 95
Query: 136 ----QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG--SHLIAQNALIAMYTKFDR--- 186
+T+ + AC+ + LGR +HAH+++ + +N+L+ +Y R
Sbjct: 96 PRSDHYTYSCALTACARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLNLYASCARHRR 155
Query: 187 --ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ R +F + +K+V SW ++ + K G EAL F ML G +P F +V
Sbjct: 156 GGVDVVRRLFDAMPKKNVVSWNTLFGWYVKTGRPDEALEMFARMLEDGV-RPTPVSFVNV 214
Query: 245 FSACSN-----------------------------------------FARILFNEIDSPD 263
F A + AR++F+ +
Sbjct: 215 FPAAGSGDPSWPFLLYGLLIKHGVEYVNDLFVVSSAIGMFSEISDVQSARMVFDRAGKKN 274
Query: 264 LASWNALIAGVASHSNANEAMSLFSE-MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+ WN +I G + ++AM LF + + +E+ D +T S + A + G Q+H
Sbjct: 275 IEVWNTMITGYVQNGQFSQAMDLFIQILGSKEVPSDVVTFLSAVTAASQSQDVRLGQQLH 334
Query: 323 SYIIKMGFDSNVPVC--NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
Y++K G S +PV NA++ MY++C + A +F L + D VSWN++I A +Q++
Sbjct: 335 GYLMK-GMHSTLPVILGNALVVMYSRCGNVQTAFELFDRLPEK-DIVSWNTMITAFVQND 392
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
E L +M S PD +T V+ A + L++ Q H Y+ + G+ + + +
Sbjct: 393 FDLEGLLLVYQMQKSGFIPDTVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGE-GLES 451
Query: 441 GLMDIYIKCGSLGSARKLFN-FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
L+D+Y K G + A+++F+ + + D V+W+++I GY Q G ++A+ F M GV
Sbjct: 452 YLIDMYSKSGRIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLQFRAMIEAGVE 511
Query: 500 PNLVTLVGVLTACSHVG 516
P VTL VL AC VG
Sbjct: 512 PTSVTLASVLPACDPVG 528
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 16/227 (7%)
Query: 37 TYAGLISACSSLRS-LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
T A ++ AC + + G+++H L +V + +++MY KCG + A F
Sbjct: 516 TLASVLPACDPVGGGVCAGKQIHSFALRHSLDTNVFVGTALVDMYSKCGEISAAENVFGG 575
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M +++ V++T MI+G Q+ A+ L+ M G+ P TF + I AC+ G V G
Sbjct: 576 MTEKSTVTYTTMISGLGQHGFGERALSLFYSMRDKGLKPDAVTFLAAISACNYSGLVDEG 635
Query: 156 RQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILDARNVFSGIARKD--VTSWGSMIAA 211
L+ + G Q+ ++ + K R+ +A + + + WGS++A+
Sbjct: 636 LSLYRSM--ETFGLAATPQHHCCIVDLLAKAGRVDEAYDFVESLGEDGNFIAIWGSLLAS 693
Query: 212 FSKLG------YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA 252
G + E + + + H Y + +F+A N++
Sbjct: 694 CKAQGKMELAAWATEKVLNIEKQYGHAGYN---VLLSQLFAAEGNWS 737
>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 166/545 (30%), Positives = 277/545 (50%), Gaps = 37/545 (6%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+S C ++LGR+ H ++ D + +++MY KCG ++ A +DKM +
Sbjct: 120 LSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDA 179
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
+ +I+ ++N A ++++Q+ G P +T+ +++ C + ++ G+QLHAH
Sbjct: 180 ATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAH 239
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
V+K ++ S NAL+ +Y+K + +A VF + ++++ SW + I F + G +A
Sbjct: 240 VVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGDFKKA 299
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNAN 281
L F+ M+ +PNEF F V ++C DL W ++
Sbjct: 300 LKQFS-MMRESGIEPNEFTFSIVLASCGC------------DLGKWMKQRTS-SNRWGGQ 345
Query: 282 EAMSLF-------SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
MS+F + L P+ + S+L AC G +H+ I+K F+S+
Sbjct: 346 HLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDA 405
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
+ +A++ MY+KC + A VF + + VSWN++IA FS+ML
Sbjct: 406 YIISALIYMYSKCGHVEKACRVFDWI---PNVVSWNTLIAG-------------FSQMLD 449
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
P +T + ++ AC +A+L ++H Y G+ DV+V + L+D+Y KCG +
Sbjct: 450 QGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISE 509
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
A+ LF M + V+W+SLI GYA G +EA++LF +M + +T VL ACSH
Sbjct: 510 AKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSH 569
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
G+VE G L+R M+ +Y I P EH +C+VDLL RAG + EA D I M + D VW
Sbjct: 570 AGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWG 629
Query: 575 SLLAS 579
+LL +
Sbjct: 630 ALLGA 634
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 224/461 (48%), Gaps = 51/461 (11%)
Query: 30 NIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
N+ RP+ TY+ +++ C ++ ++Q G+++H H++ + + + N +L +Y KCG +E
Sbjct: 207 NMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMME 266
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
+A + F+ + QRN++SWTA I G Q+ A+K + M +SG+ P +FTF ++ +C
Sbjct: 267 EAEIVFENLGQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCG 326
Query: 148 GLGSVC-LGRQLHAHVIKSEHGS-HLIAQNALIAMYTKFDRILDARN---VFSGIAR--- 199
C LG+ + + G HL++ L M + ++ R V I +
Sbjct: 327 -----CDLGKWMKQRTSSNRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACG 381
Query: 200 --KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--L 255
D + +M K +E + AY + I+ ++S C + + +
Sbjct: 382 HLSDRRTGENMHTVILKNSFESD------------AYIISALIY--MYSKCGHVEKACRV 427
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F+ I P++ SWN LIAG FS+M D+ P +T+ SLL AC L
Sbjct: 428 FDWI--PNVVSWNTLIAG-------------FSQMLDQGFCPSSVTISSLLPACTNVANL 472
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
G ++H Y + +G + +V V +A++ MYAKC + A ++F + + ++V+WNS+I
Sbjct: 473 RHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPER-NTVTWNSLIFG 531
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI-TKTGLAF 434
H E LF++M S K DH+TF V+ AC+ +E+ L + K +
Sbjct: 532 YANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEP 591
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
+ ++D+ + G L A L M PD W +L+
Sbjct: 592 RLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALL 632
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 143/310 (46%), Gaps = 31/310 (10%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
Q+L + L+ + N +RP+ + ++ AC L + G +H IL + + D
Sbjct: 345 QHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESD 404
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
+ + ++ MY KCG +E A FD +P NVVSW +IAG S QML
Sbjct: 405 AYIISALIYMYSKCGHVEKACRVFDWIP--NVVSWNTLIAGFS-------------QMLD 449
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD 189
G P T S++ AC+ + ++ G+++H + + + ++AL+ MY K I +
Sbjct: 450 QGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISE 509
Query: 190 ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
A+ +F + ++ +W S+I ++ GY EA+ FN+M + + F +V +ACS
Sbjct: 510 AKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQM-EESDTKLDHLTFTAVLNACS 568
Query: 250 NFARI-----LFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
+ + LF ++ P L + ++ + +EA L M + PD
Sbjct: 569 HAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAM---PVEPDK 625
Query: 300 LTVHSLLCAC 309
+LL AC
Sbjct: 626 FVWGALLGAC 635
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 179/572 (31%), Positives = 298/572 (52%), Gaps = 49/572 (8%)
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM----PQRNVVSWTAMIAGC 111
+V +++ +PD+V + +++ Y + G E+A + + +M + N ++++++ GC
Sbjct: 99 RVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGC 158
Query: 112 S--QNYQENDAI---KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE 166
S +N + I L +M+ +G+ P +F+ +++ AC+GL G ++H ++IK
Sbjct: 159 SLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLG 218
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA-------------FS 213
+ S + NAL+ MY K A VF I + D+ SW ++IA
Sbjct: 219 YDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLG 278
Query: 214 KLG-YELE----------------ALCHFNEMLHHG----AYQPNEFI---FGSVFSACS 249
K+G Y + L LH +P+ F+ ++S C
Sbjct: 279 KMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCG 338
Query: 250 NF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC 307
AR++F+ + D+ WN++I+G ++ EAMSLF+ M L + T+ ++L
Sbjct: 339 LLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILK 398
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
+ G QVH+ IK G+ + V N++L Y KC +L +A VF E+ D V
Sbjct: 399 STAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVF-EVCPAEDLV 457
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
++ S+I A Q+ EE +++ RM IKPD F+ + ACA +++ E Q+H ++
Sbjct: 458 AYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHV 517
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K GL DVF N L+++Y KCGS+ A +FN + +VSWS++I G AQ G G +AL
Sbjct: 518 LKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKAL 577
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
+LF +M G+ PN +TLV VL+AC+H GLV E + +ME +GI PT+EH +C+VD+
Sbjct: 578 QLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDI 637
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
L R G + EA + +M A VW +LL +
Sbjct: 638 LGRVGRLDEAMVLVKEMPFQASAAVWGALLGA 669
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 206/423 (48%), Gaps = 40/423 (9%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
+T I + + +++AC+ L G KVH +++ D N +L+MY K G E
Sbjct: 181 STGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPE 240
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
A F ++P+ ++VSW A+IAGC + + + A+KL +M V P FT S +KAC+
Sbjct: 241 AAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACA 300
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
+G V LGRQLH+ ++K + LI MY+K + DAR VF + KDV W S
Sbjct: 301 AIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNS 360
Query: 208 MIAAFSKLGYELEALCHFNEMLHHG----------------------------------A 233
+I+ +S GY++EA+ F M G
Sbjct: 361 IISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSG 420
Query: 234 YQPNEFIFGSVFSACSNF-----ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
YQ + ++ S+ + A +F + DL ++ ++I + + EA+ ++
Sbjct: 421 YQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYL 480
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
M+DR++ PD SL AC QG Q+H +++K G S+V N+++ MYAKC
Sbjct: 481 RMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCG 540
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ +A +F E+ VSW+++I QH + +LF +ML + I P+HIT V+
Sbjct: 541 SIDDASCIFNEISWRG-IVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVL 599
Query: 409 GAC 411
AC
Sbjct: 600 SAC 602
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 146/288 (50%), Gaps = 23/288 (7%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
N+Y E L +F+Q +T + ++ + + ++ +VH + S Q D +
Sbjct: 380 NMYKEGL---EFNQ---------TTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYV 427
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
N +L+ YGKC LEDA F+ P ++V++T+MI SQ +A+K+Y++M +
Sbjct: 428 ANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDI 487
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
P F F S+ AC+ L + G+Q+H HV+K S + A N+L+ MY K I DA
Sbjct: 488 KPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASC 547
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF- 251
+F+ I+ + + SW +MI ++ G+ +AL F +ML +G PN SV SAC++
Sbjct: 548 IFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGIL-PNHITLVSVLSACNHAG 606
Query: 252 ----ARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEM 290
AR F ++ +P + ++ + +EAM L EM
Sbjct: 607 LVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEM 654
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 137/277 (49%), Gaps = 13/277 (4%)
Query: 313 LTLYQGMQVHSYIIKMGFDSNVP---VCNAILTMYAKCSVLCNALLVFKE---LGKNADS 366
+ LY Q K+ DS+ P +A+++ Y + ALL + E LG +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 367 VSWNSIIAAC-----LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
+++S++ C L+ + L + M+++ I P+ + + V+ ACA +
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
++H Y+ K G D F N L+D+Y K G +A +F + PD+VSW+++I G
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC 541
D ALKL +M S V+P++ TL L AC+ +GLV+ G L+ + + + P
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALM-KMDMEPDSFVG 327
Query: 542 SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++D+ ++ G + +A + M D++VW S+++
Sbjct: 328 VGLIDMYSKCGLLQDARMVFDLMPXK-DVIVWNSIIS 363
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 197/632 (31%), Positives = 313/632 (49%), Gaps = 61/632 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQ-NNTNIRIRPSTYA--GLISACSSLRS--LQLGRKV 57
N +S C++ A + Q + +RP+ Y L++A SL L L ++
Sbjct: 314 NSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQM 373
Query: 58 HDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQE 117
I S D+ + + ++N + + G ++ A+M F +M RN V+ ++ G ++ +Q
Sbjct: 374 LTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQG 433
Query: 118 NDAIKLYIQM-----LQSG---VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGS 169
+A K++ +M + S V+ FT S +K G+++HA++ +S
Sbjct: 434 EEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKR-----KGQEVHAYLFRSGLVD 488
Query: 170 HLIA-QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
I+ NAL+ MY K I +A +VF + KD SW SMI+ EA+ F+ M
Sbjct: 489 ARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTM 548
Query: 229 LHHGAYQPNEFIFGSVFSACSNFARI---------------------------LFNEIDS 261
+G P+ F S S+CS+ + L+ E DS
Sbjct: 549 KRNGMV-PSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDS 607
Query: 262 -----------P--DLASWNALIAGVASH-SNANEAMSLFSEMRDRELLPDGLTVHSLLC 307
P D SWN+ I +A + ++ +A+ F EM P+ +T ++L
Sbjct: 608 INECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILA 667
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
A L G Q+H+ I+K + + NA+L Y KC + + ++F + + D V
Sbjct: 668 AVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEV 727
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
SWNS+I+ L + L M+ K D TF V+ ACA +A+LE ++H
Sbjct: 728 SWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACA 787
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
+ L DV V + L+D+Y KCG + A + F M ++ SW+S+I GYA+ G G +AL
Sbjct: 788 VRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKAL 847
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
K+FTRM+ G SP+ VT VGVL+ACSHVGLV+EG ++ M YG+ P EH SC+VDL
Sbjct: 848 KIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDL 907
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
L RAG V + EDFI M D +I++W+++L +
Sbjct: 908 LGRAGDVKKIEDFIKTMPMDPNILIWRTVLGA 939
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 166/578 (28%), Positives = 280/578 (48%), Gaps = 61/578 (10%)
Query: 58 HDHILLSKC--QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
H H+ L K DV N ++N+Y + G+L AR FD+MPQ+N+VSW+ +I+G +QN
Sbjct: 161 HLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNR 220
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS--VCLGRQLHAHVIKSEHGSHLIA 173
++A L+ ++ SG++P F GS ++AC GS + LG Q+HA + K S +I
Sbjct: 221 MPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMIL 280
Query: 174 QNALIAMYTKFD-RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
N L++MY+ I DA VF I ++ +W S+I+ + + G + A F+ M G
Sbjct: 281 SNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEG 340
Query: 233 A---YQPNEFIFGS-VFSACS---------------------------------NFAR-- 253
+PNE+ S V +ACS FAR
Sbjct: 341 VELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYG 400
Query: 254 ------ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR-ELLPDGLTVHSLL 306
++F ++ + + N L+ G+A EA +F EM+D E+ + L V LL
Sbjct: 401 LMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVV--LL 458
Query: 307 CACIGRLTLYQ----GMQVHSYIIKMGF-DSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
L + G +VH+Y+ + G D+ + + NA++ MY KC+ + NA VF +L
Sbjct: 459 STFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVF-QLM 517
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
+ D+VSWNS+I+ + + EE F M + + P + + + +C+ + L +
Sbjct: 518 PSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGR 577
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
Q+H K GL DV V N L+ +Y + S+ +K+F M D VSW+S I A++
Sbjct: 578 QIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYE 637
Query: 482 CGD-EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
+ALK F M G PN VT + +L A S ++ G ++ ++ +Y +
Sbjct: 638 ASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALIL-KYSVADDNAI 696
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++ + + + E ++M+ D V W S+++
Sbjct: 697 ENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMIS 734
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 154/587 (26%), Positives = 271/587 (46%), Gaps = 69/587 (11%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC-GSLEDARMGFDKMPQRNVVSWTAMIA 109
++LG ++H I C D++L N +++MY C GS++DA FD++ RN V+W ++I+
Sbjct: 259 IKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIIS 318
Query: 110 GCSQNYQENDAIKLYIQMLQSGV----MPGQFTFGSIIKACSGLGS--VCLGRQLHAHVI 163
+ A KL+ M GV P ++T S++ A L + L Q+ +
Sbjct: 319 VYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIE 378
Query: 164 KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALC 223
KS L +AL+ + ++ + A+ +F + ++ + ++ ++ EA
Sbjct: 379 KSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAK 438
Query: 224 HFNEM-----------------------LHHGAYQPNE---FIFGS-------------- 243
F EM L G + E ++F S
Sbjct: 439 VFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALV 498
Query: 244 -VFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
++ C+ + A +F + S D SWN++I+G+ + EA+S F M+ ++P
Sbjct: 499 NMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNF 558
Query: 301 TVHSLL--CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+V S L C+ +G LTL G Q+H K G D +V V NA+LT+YA+ + VF
Sbjct: 559 SVISTLSSCSSLGWLTL--GRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFF 616
Query: 359 ELGKNADSVSWNSIIAACLQHNQAE-ELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
++ D VSWNS I A ++ + + + F M+ + +P+ +TF +++ A + + L
Sbjct: 617 QM-PEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVL 675
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM-ENPDVVSWSSLILG 476
+ Q+H I K +A D + N L+ Y KC + +F+ M E D VSW+S+I G
Sbjct: 676 GLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISG 735
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-----RIMENE 531
Y G +A+ L M G + T VL+AC+ V +E G+ ++ +E++
Sbjct: 736 YLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESD 795
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ S +VD+ A+ G + A F M +I W S+++
Sbjct: 796 VVV------GSALVDMYAKCGKIDYASRFFELMPV-RNIYSWNSMIS 835
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/477 (21%), Positives = 216/477 (45%), Gaps = 59/477 (12%)
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
LH + K+ + N LI +Y + ++ AR +F + +K++ SW +I+ +++
Sbjct: 161 HLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNR 220
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------------- 249
EA F ++ G PN F GS AC
Sbjct: 221 MPDEACSLFKGVISSGLL-PNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMI 279
Query: 250 ----------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR-- 291
+ A +F+EI + +WN++I+ +A A LFS M+
Sbjct: 280 LSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQME 339
Query: 292 --DRELLPDGLTVHSLLCAC--IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
+ L P+ T+ SL+ A + L Q+ + I K GF ++ V +A++ +A+
Sbjct: 340 GVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARY 399
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
++ A ++FK++ + ++V+ N ++ + +Q EE ++F M ++ + + +
Sbjct: 400 GLMDCAKMIFKQM-YDRNAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVEINSESLVVL 457
Query: 408 MGACAKMASLE----MVTQLHCYITKTGLA-FDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
+ + ++L+ ++H Y+ ++GL + + N L+++Y KC ++ +A +F M
Sbjct: 458 LSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLM 517
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
+ D VSW+S+I G +EA+ F M+ G+ P+ +++ L++CS +G + G
Sbjct: 518 PSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGR 577
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++ ++G+ + ++ L A ++E + QM + D V W S + +
Sbjct: 578 QIHG-EGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMP-EYDQVSWNSFIGA 632
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 133/261 (50%), Gaps = 13/261 (4%)
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
+LY +H + K GF +V CN ++ +Y + L +A +F E+ + + VSW+ +I
Sbjct: 155 SLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQK-NLVSWSCLI 213
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS--LEMVTQLHCYITKTG 431
+ Q+ +E LF +++S + P+H + AC + S +++ Q+H +I K
Sbjct: 214 SGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLP 273
Query: 432 LAFDVFVMNGLMDIYIKC-GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
D+ + N LM +Y C GS+ A ++F+ ++ + V+W+S+I Y + G A KLF
Sbjct: 274 CVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLF 333
Query: 491 TRMRSLGVS----PNLVTLVGVLT-ACS--HVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
+ M+ GV PN TL ++T ACS GLV L RI ++ G + S
Sbjct: 334 SVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKS--GFLRDLYVGSA 391
Query: 544 VVDLLARAGCVHEAEDFINQM 564
+V+ AR G + A+ QM
Sbjct: 392 LVNGFARYGLMDCAKMIFKQM 412
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 370 NSIIAACLQHNQAEELF-RLFSRMLASQIKPDHITF--------NDVMGACAKMASLEMV 420
N+ +A C A LF RL ++ ++ H TF + +SL
Sbjct: 100 NTCVAGCDFPEMASHLFMRLLNKYNSTYTFLRHYTFSHSQLQQLDSEFDRYKTSSSLYDA 159
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
LH + KTG DVF N L++IY++ G+L SARKLF+ M ++VSWS LI GY Q
Sbjct: 160 NHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQN 219
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
DEA LF + S G+ PN + L AC G
Sbjct: 220 RMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCG 255
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 158/490 (32%), Positives = 262/490 (53%), Gaps = 35/490 (7%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F+ + N++ W M+ G + + +++Y++M+ G +P +TF ++K+C+ +
Sbjct: 40 FETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTF 99
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
GRQ+HA V+K A +LI+MY + R+ DAR VF +++DV S ++I +
Sbjct: 100 EEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGY 159
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
+ G V SA R +F+ I D+ SWNA+I
Sbjct: 160 ASRG--------------------------DVRSA-----RKVFDXITERDVVSWNAMIT 188
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFD 331
G + EA+ LF EM + PD T+ S+L AC ++ G ++H+ + GF
Sbjct: 189 GYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFG 248
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
S++ + NA + +Y+KC + A +F+ L D VSWN++I N +E LF
Sbjct: 249 SSLKIVNAFIGLYSKCGDVEIASGLFEGLSCK-DVVSWNTLIGGYTHMNLYKEALLLFQE 307
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFDVFVMNGLMDIYIKC 449
ML S P+ +T V+ ACA + ++++ +H YI K G+ + L+D+Y KC
Sbjct: 308 MLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKC 367
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
G + +A ++FN M + + SW+++I G+A G + A LF+RMR G+ P+ +TLVG+L
Sbjct: 368 GDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLL 427
Query: 510 TACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
+ACSH GL++ G H+++ + +Y I P EH C++DLL AG EAE+ I+ M + D
Sbjct: 428 SACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPD 487
Query: 570 IVVWKSLLAS 579
V+W SLL +
Sbjct: 488 GVIWCSLLKA 497
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 192/440 (43%), Gaps = 80/440 (18%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L+ +C+ ++ + GR++H ++ C+ D +++MY + G LEDAR FD
Sbjct: 85 TFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXS 144
Query: 97 PQRNVVS-------------------------------WTAMIAGCSQNYQENDAIKLYI 125
QR+VVS W AMI G +N +A++L+
Sbjct: 145 SQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFK 204
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH--GSHLIAQNALIAMYTK 183
+M+++ V P + T S++ AC+ GS+ LGR++H ++ H GS L NA I +Y+K
Sbjct: 205 EMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHT-LVDDHHGFGSSLKIVNAFIGLYSK 263
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
+ A +F G++ KDV SW ++I ++ + EAL F EML G PN+ S
Sbjct: 264 CGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGE-SPNDVTMLS 322
Query: 244 VFSACSNFARI------------------------------------------LFNEIDS 261
V AC++ I +FN +
Sbjct: 323 VLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMH 382
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
L+SWNA+I G A H AN A LFS MR + PD +T+ LL AC L G +
Sbjct: 383 KSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHI 442
Query: 322 HSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+ + + ++ + + A + + D V W S++ AC H
Sbjct: 443 FKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHG 502
Query: 381 QAEELFRLFSRMLASQIKPD 400
EL F++ L +I+P+
Sbjct: 503 NL-ELAESFAQKLM-EIEPE 520
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 190/411 (46%), Gaps = 48/411 (11%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVH----DHILLSKCQPDV 70
Y EAL + TN+R T ++SAC+ S++LGR++H DH +
Sbjct: 196 YEEALELFK-EMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGS---SL 251
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ N + +Y KCG +E A F+ + ++VVSW +I G + +A+ L+ +ML+S
Sbjct: 252 KIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRS 311
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS----EHGSHLIAQNALIAMYTKFDR 186
G P T S++ AC+ LG++ +GR +H ++ K +GS L + +LI MY K
Sbjct: 312 GESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSAL--RTSLIDMYAKCGD 369
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
I A VF+ + K ++SW +MI F+ G A F+ M +G +P++ + S
Sbjct: 370 IEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNG-IEPDDITLVGLLS 428
Query: 247 ACS-----NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
ACS + R +F + +P L + +I + EA + M +
Sbjct: 429 ACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMM---PME 485
Query: 297 PDGLTVHSLLCACI--GRLTLYQG-----MQVH-----SYIIKMGFDSNVPVCNAILTMY 344
PDG+ SLL AC G L L + M++ SY++ SN+
Sbjct: 486 PDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLL----SNIYATAGRWEDV 541
Query: 345 AKCSVLCNALLVFKELGKNA---DSVSWNSIIAACLQHNQAEELFRLFSRM 392
A+ + N + K G ++ DSV II L H Q+ E++R+ M
Sbjct: 542 ARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKL-HPQSREIYRMLEEM 591
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 163/482 (33%), Positives = 257/482 (53%), Gaps = 46/482 (9%)
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
+ S+I+ C G+ S+ ++ +H +K G H N LI Y K ++ AR VF +
Sbjct: 80 YSSLIQQCIGIKSITDITKIQSHALK--RGFHHSLGNKLIDAYLKCGSVVYARKVFDEVP 137
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------- 251
+ + +W SMIA++ + G EA+ + M+ G P+EF F SVF A S+
Sbjct: 138 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGIL-PDEFTFSSVFKAFSDLGLVHEGQ 196
Query: 252 ----------------------------------ARILFNEIDSPDLASWNALIAGVASH 277
AR++ +++ D+ + ALI G + H
Sbjct: 197 RAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHH 256
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
E++ +F M + + + T+ S+L C L G +H I+K G +S V
Sbjct: 257 GEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQ 316
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
++LTMY +C ++ ++L VFK+ N + V+W S+I +Q+ + E F +ML S I
Sbjct: 317 TSLLTMYYRCGLVDDSLKVFKQF-INPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSI 375
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
P+ T + V+ AC+ +A LE Q+H + K GL D +V L+D Y KCGS AR
Sbjct: 376 TPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARS 435
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
+FN + DVVS +S+I YAQ G G EAL+LF+ M+ G+ PN VT +GVL+AC++ GL
Sbjct: 436 VFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGL 495
Query: 518 VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+EEG H++ N I T++H +C+VDLL RAG + EAE INQ+ +D+V+W++LL
Sbjct: 496 LEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLL 554
Query: 578 AS 579
++
Sbjct: 555 SA 556
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 145/503 (28%), Positives = 236/503 (46%), Gaps = 58/503 (11%)
Query: 24 FSQNNTNIR-------IRPST-YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
FSQ+N IR I+ + Y+ LI C ++S+ K+ H L L N
Sbjct: 58 FSQSNIKIRKLCITETIQSTKLYSSLIQQCIGIKSITDITKIQSHALKRGFHHS--LGNK 115
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
+++ Y KCGS+ AR FD++P R++V+W +MIA +N + +AI +Y +M+ G++P
Sbjct: 116 LIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPD 175
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG-SHLIAQNALIAMYTKFDRILDARNVF 194
+FTF S+ KA S LG V G++ H + G S++ +AL+ MY KF ++ DAR V
Sbjct: 176 EFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVS 235
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
+ KDV + ++I +S G + E+L F M G + NE+ SV C N +
Sbjct: 236 DQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKG-IEANEYTLSSVLVCCGNLEDL 294
Query: 255 ----------------------------------------LFNEIDSPDLASWNALIAGV 274
+F + +P+ +W ++I G+
Sbjct: 295 TSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGL 354
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+ A+ F +M + P+ T+ S+L AC L QG Q+H+ ++K G D +
Sbjct: 355 VQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDK 414
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V A++ Y KC A VF L D VS NS+I + Q+ E +LFS M
Sbjct: 415 YVGAALIDFYGKCGSTEIARSVFNGL-LEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKD 473
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG---LAFDVFVMNGLMDIYIKCGS 451
+ ++P+++T+ V+ AC LE + +G L D + ++D+ + G
Sbjct: 474 TGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYAC--MVDLLGRAGR 531
Query: 452 LGSARKLFNFMENPDVVSWSSLI 474
L A L N + DVV W +L+
Sbjct: 532 LKEAEMLINQVNISDVVIWRTLL 554
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 208/464 (44%), Gaps = 57/464 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N ++S + EA+ D Q I P T++ + A S L + G++ H
Sbjct: 145 NSMIASYIRNGRSKEAI---DIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQ 201
Query: 61 -ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
++L +V + + +++MY K G + DAR+ D++ ++VV +TA+I G S + ++ +
Sbjct: 202 SVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGE 261
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
+++++ M + G+ ++T S++ C L + GR +H ++K+ S + +Q +L+
Sbjct: 262 SLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLT 321
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY + + D+ VF + +W S+I + G E AL F +ML + PN F
Sbjct: 322 MYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQML-RSSITPNSF 380
Query: 240 IFGSVFSACSNF----------------------------------------ARILFNEI 259
SV ACS+ AR +FN +
Sbjct: 381 TLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGL 440
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
D+ S N++I A + +EA+ LFS M+D L P+ +T +L AC L +G
Sbjct: 441 LEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGC 500
Query: 320 QVHSYIIKMGFDSNVPVCNA----ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
+ S G N+ + ++ + + L A ++ ++ +D V W ++++A
Sbjct: 501 HIFSSARNSG---NIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLSA 556
Query: 376 CLQHNQAEELFRLFSRM--LASQIKPDHITFNDVMGACAKMASL 417
C H E R+ +R+ LA + H+ +++ + + +
Sbjct: 557 CRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKV 600
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 158/575 (27%), Positives = 290/575 (50%), Gaps = 45/575 (7%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A L+ C+S++ L ++ ++ + + + Q +++++ K GS+ +A F+ +
Sbjct: 53 AVLLELCTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDD 109
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+ + M+ G ++N A+ +M V P + F ++K C + G+++
Sbjct: 110 KLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEI 169
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H +I + +++ A ++ MY K +I DA +F + +D+ SW ++IA FS+ G+
Sbjct: 170 HGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFA 229
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------------- 251
+AL M G +P+ +V A ++
Sbjct: 230 KKALELVLRMQDEGQ-RPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTA 288
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
AR++F+ +D + SWN+++ G + +A+++F +M + + P
Sbjct: 289 LADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPT 348
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
G+T+ L AC L +G VH ++ ++ S++ V N++++MY+KC + A +F
Sbjct: 349 GVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFN 408
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
L VSWN++I Q+ + E FS M + +KPD T V+ A A+++
Sbjct: 409 NLNGRT-HVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTR 467
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
+H I ++ L ++FV L+D+Y KCG++ ARKLF+ + + V++W+++I GY
Sbjct: 468 HAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYG 527
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
G G AL LF +M+ V PN +T + V++ACSH GLV+EGL ++ M+ +YG+ P+
Sbjct: 528 THGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSM 587
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
+H +VDLL RAG + EA DFI M I V+
Sbjct: 588 DHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVY 622
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 221/474 (46%), Gaps = 46/474 (9%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++P Y L+ C L+ G+++H ++ + +V ++NMY KC ++DA
Sbjct: 143 VKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAY 202
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+MP+R++VSW +IAG SQN A++L ++M G P T +++ A + +G
Sbjct: 203 KMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVG 262
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ +G+ +H + I++ + AL MY+K + AR +F G+ +K V SW SM+
Sbjct: 263 LLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMD 322
Query: 211 AFSKLGYELEALCHFNEMLHHGA-------------------YQPNEFIFG--------- 242
+ + G +A+ F +ML G + +F+
Sbjct: 323 GYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGS 382
Query: 243 ---------SVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
S++S C + A +FN ++ SWNA+I G A + +EA++ FSEM+
Sbjct: 383 DISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMK 442
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ PD T+ S++ A +H II+ D N+ V A++ MY+KC +
Sbjct: 443 SLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIH 502
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A +F ++ + ++WN++I H LF +M ++P+ IT+ V+ AC
Sbjct: 503 MARKLF-DMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISAC 561
Query: 412 AKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
+ + E + GL + ++D+ G G ++ ++F+EN
Sbjct: 562 SHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDL---LGRAGRIKEAWDFIEN 612
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 77/169 (45%), Gaps = 7/169 (4%)
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
C M L + L + K GL + L+ ++ K GS+ A ++F +++ +
Sbjct: 59 CTSMKELHQIIPL---VIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALY 115
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIME 529
+++ GYA+ + AL RMR V P + +L C ++ G ++ +++
Sbjct: 116 HTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLIT 175
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
N + + VV++ A+ + +A ++M + D+V W +++A
Sbjct: 176 NSFA--ANVFAMTGVVNMYAKCRQIDDAYKMFDRMP-ERDLVSWNTIIA 221
>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
Length = 849
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 174/597 (29%), Positives = 296/597 (49%), Gaps = 47/597 (7%)
Query: 26 QNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK-CQPDVVLQNHILNMYGKCG 84
QN + + P+ Y L+ + +L + + HI SK D +L N ++ YGKCG
Sbjct: 74 QNQKSDFVDPAAYVSLLKQAGDVTAL---KTIQAHISHSKRFSGDRLLLNCVVEAYGKCG 130
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
++DAR+ F + NV SWT ++A +QN ++L QM GV P T ++I
Sbjct: 131 CVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIG 190
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSH-LIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
A S LG R++HA + ++ ++ ALI MY K I A VF KD+
Sbjct: 191 AVSELGDWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLA 250
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------ 251
+MI+A+ +LGY ++A+ FN + G QPN+ + +F AC+
Sbjct: 251 CCNAMISAYIQLGYTVDAVSTFNRIQPSG-LQPNQVTYALLFRACATNGVYSDARVAHMC 309
Query: 252 ----------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEA 283
AR +F+ + ++ +WN +IAG A +EA
Sbjct: 310 FILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEA 369
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
+ L+ M + PD +T ++L +C L G +H +++ G+DS++ V +A++TM
Sbjct: 370 LQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITM 429
Query: 344 YAKCSVLCNALLVF-KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
Y+ C L +A+ VF K + ++ +SW +++ A ++ + LF +M +K + +
Sbjct: 430 YSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVV 489
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
TF + AC+ + +L + + TG DV + L+++Y KCG L A ++F+ +
Sbjct: 490 TFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHL 549
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
++V+W++++ +Q G + +L M G PN +TL+ +L CSH GLV + +
Sbjct: 550 SFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAV 609
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+R M + ++PT EH C+VDLL R+G + E E FI+ D V+W SLL S
Sbjct: 610 SYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGS 666
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 224/504 (44%), Gaps = 82/504 (16%)
Query: 20 VAYDFSQNNTNIRIRPS-------TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
+ Y +T RI+PS TYA L AC++ R H +LSK +PDVV+
Sbjct: 262 LGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVV 321
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
+++MY +CGSLEDAR FD+MP +NVV+W MIAG +Q ++A++LY+ M +GV
Sbjct: 322 NTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGV 381
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
P + TF +++++CS + GR +H HV+ + + S L +ALI MY+ + DA +
Sbjct: 382 EPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVD 441
Query: 193 VF-SGI-ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
VF G+ V SW +M+ A ++ G AL F +M G + N F S ACS+
Sbjct: 442 VFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGV-KANVVTFVSTIDACSS 500
Query: 251 ----------FARIL------------------------------FNEIDSPDLASWNAL 270
F R++ F+ + ++ +WN +
Sbjct: 501 IGALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTI 560
Query: 271 IAGVASHSNANEAMS--LFSEMRDRELLPDGLTVHSLLCAC-----IGRLTLYQGMQVHS 323
+A AS N E +S L EM P+ +T+ ++L C + + Y V+
Sbjct: 561 LA--ASSQNGEETLSAELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYG 618
Query: 324 YIIKMGFDSNVPVCN---AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+ + VP ++ + + L + DSV W S++ +C+ H+
Sbjct: 619 HCL-------VPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHS 671
Query: 381 QAEELFRLFSRMLASQIK---PDHITFN--------DVMGACAKMASLEMVT--QLHCYI 427
E R R+L K P + N D + + AK+A + Q YI
Sbjct: 672 DVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLDAVKSLAKLAGERAMKKEQSRSYI 731
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGS 451
G+ + V GL + K G+
Sbjct: 732 EVNGVVHEFGVRAGLHRLGEKIGA 755
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 207/465 (44%), Gaps = 63/465 (13%)
Query: 7 SSLCKQNLYNEALVAYDFSQNNTN------------IRIRPS--TYAGLISACSSLRSLQ 52
SS+ N+Y+ ++ ++QN + + + P+ T A +I A S L
Sbjct: 140 SSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGDWD 199
Query: 53 LGRKVHDHILLSKCQ--PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
RK+H + CQ DVVL +++MY KCG + A + FD+ +++ AMI+
Sbjct: 200 EARKIHARAA-ATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISA 258
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
Q DA+ + ++ SG+ P Q T+ + +AC+ G R H I S+
Sbjct: 259 YIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPD 318
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
++ AL++MY++ + DAR VF + K+V +W MIA +++ GY EAL + M
Sbjct: 319 VVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEA 378
Query: 231 HGAYQPNEFIFGSVFSACS-----NFARILFNEI-------------------------- 259
G +P+E F +V +CS R + +
Sbjct: 379 AGV-EPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLG 437
Query: 260 DSPD-----------LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCA 308
D+ D + SW A++ + + A++LF +M + + +T S + A
Sbjct: 438 DAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVVTFVSTIDA 497
Query: 309 CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSV 367
C L +G + +I G+ +V + +++ +Y KC L AL VF L KN V
Sbjct: 498 CSSIGALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLSFKNI--V 555
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
+WN+I+AA Q+ + L M +P+ +T +++ C+
Sbjct: 556 TWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMTLLNMLFGCS 600
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 148/323 (45%), Gaps = 10/323 (3%)
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
++ P + L S + + ++ E + D SLL G +T +
Sbjct: 43 VEEPQAHDYAPLAPPTLSDEDVKQRLASLEEQNQKSDFVDPAAYVSLLKQA-GDVTALKT 101
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
+Q H K F + + N ++ Y KC + +A LVF + ++ + SW ++AA Q
Sbjct: 102 IQAHISHSKR-FSGDRLLLNCVVEAYGKCGCVKDARLVFSSI-RHPNVYSWTILLAAYAQ 159
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVF 437
+ + + L +M + P+ +T V+GA +++ + ++H T L +DV
Sbjct: 160 NGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVV 219
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
++ L+D+Y KCG + A +F+ N D+ +++I Y Q G +A+ F R++ G
Sbjct: 220 LVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSG 279
Query: 498 VSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
+ PN VT + AC+ G+ + H+ I+ + P + +V + +R G +
Sbjct: 280 LQPNQVTYALLFRACATNGVYSDARVAHMCFILSK---LRPDVVVNTALVSMYSRCGSLE 336
Query: 556 EAEDFINQMACDADIVVWKSLLA 578
+A ++M ++V W ++A
Sbjct: 337 DARRVFDRMP-GKNVVTWNVMIA 358
>gi|449529626|ref|XP_004171799.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g04860-like [Cucumis sativus]
Length = 704
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 164/538 (30%), Positives = 271/538 (50%), Gaps = 36/538 (6%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
L++Y K G ++ A+ FD P+++VVSW A+I+G ++ +DA KL+++M + P
Sbjct: 104 FLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEMRRREFDPC 163
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
Q T S++ +C G+ +H +K+ +NAL++MY K + + +F
Sbjct: 164 QRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFG 223
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----- 250
I K V SW +MI AF + G EA+ F +ML + N S+ SA +N
Sbjct: 224 EITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEE-SVNANSVTMVSILSANANTGCIH 282
Query: 251 -----------------------------FARILFNEIDSPDLASWNALIAGVASHSNAN 281
A +++ +L + A+I+ A +
Sbjct: 283 CYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMG 342
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
+ L+S ++ ++ D + + ++ + G+ H Y +K G + V N +
Sbjct: 343 SVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFI 402
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+MY+K + +F+E+ K S SWNS+I++C Q ++ + LFS+M S PD
Sbjct: 403 SMYSKFDNIDAVFSLFQEMHKKTLS-SWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDS 461
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
IT ++ AC + +L LHCYI + L + FV L+D+Y+KCG + A +F
Sbjct: 462 ITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKS 521
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
M+ P + SW+SLI GY FG + AL +T M G+ PN +T G+L AC+H GLVEEG
Sbjct: 522 MKEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEG 581
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++IM+ ++GI+P +HC+ +V +L RAG EA FI M + D VW +LL++
Sbjct: 582 RKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGALLSA 639
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 210/480 (43%), Gaps = 50/480 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T L+ +C + + G+ +H + + D ++N +++MYGKC L+ ++ F ++
Sbjct: 166 TLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEI 225
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+++VVSW MI QN ++A+ ++ QML+ V T SI+ A + G +
Sbjct: 226 TEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANTGCI---- 281
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
H + K ++ +L+ Y K I A ++ +K++ + ++I+ +++ G
Sbjct: 282 --HCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKG 339
Query: 217 YELEALCHFNEMLHH---------------GAYQPNEFIFGSVF---------------- 245
++ ++ ++ H G P+ G F
Sbjct: 340 -DMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVA 398
Query: 246 ----SACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
S S F I LF E+ L+SWN++I+ A + +AM+LFS+M
Sbjct: 399 NGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYG 458
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD +T+ SLL AC L+ G +H YI++ D V A++ MY KC + A V
Sbjct: 459 PDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENV 518
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
FK + K SWNS+I+ ++ M+ IKP+ ITF+ ++ AC
Sbjct: 519 FKSM-KEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGL 577
Query: 417 LEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
+E + + K G+ + ++ + + G A ME NPD W +L+
Sbjct: 578 VEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGALL 637
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 129/520 (24%), Positives = 218/520 (41%), Gaps = 85/520 (16%)
Query: 123 LYIQMLQSGVMPGQFTFGSIIKA--------------CSGLGSVCLGRQLHAHVIKSEHG 168
L+ ++L+ V P TF +IKA CS QL H IK
Sbjct: 37 LFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSFCSE-NEKAEANQLQTHFIKWGFD 95
Query: 169 SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
L A + +Y+K + A+ +F KDV SW ++I+ +++ G +A F EM
Sbjct: 96 QFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEM 155
Query: 229 LHHGAYQPNE---------------FIFG-----------------------SVFSACSN 250
+ P + F+ G S++ C++
Sbjct: 156 RRR-EFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCAD 214
Query: 251 F--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCA 308
++LF EI + SWN +I + +EAM +F +M + + + +T+ S+L A
Sbjct: 215 LDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSA 274
Query: 309 -----CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF-KELGK 362
CI H Y K+G NV V +++ Y KC + A L++ +L K
Sbjct: 275 NANTGCI-----------HCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKK 323
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
N V+ +II+ + + RL+S + +K D + ++ + +
Sbjct: 324 NL--VALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLA 381
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGC 482
H Y K+GL D V NG + +Y K ++ + LF M + SW+S+I AQ G
Sbjct: 382 FHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGR 441
Query: 483 GDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMEN--EYGIIPTR 538
+A+ LF++M G P+ +TL +L+AC G + G LH Y + N G + T
Sbjct: 442 SIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVGT- 500
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+VD+ + G + AE+ M + + W SL++
Sbjct: 501 ----ALVDMYVKCGRMDFAENVFKSMK-EPCLASWNSLIS 535
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 153/345 (44%), Gaps = 42/345 (12%)
Query: 80 YGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTF 139
Y KCG +E A + + ++N+V+ TA+I+ ++ ++LY + +
Sbjct: 304 YVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAM 363
Query: 140 GSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR 199
II+ + + +G H + +KS + N I+MY+KFD I ++F + +
Sbjct: 364 VGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHK 423
Query: 200 KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------- 249
K ++SW S+I++ ++ G ++A+ F++M G Y P+ S+ SAC
Sbjct: 424 KTLSSWNSVISSCAQAGRSIDAMALFSQMTLSG-YGPDSITLASLLSACCQNGNLHFGEI 482
Query: 250 ------------------------------NFARILFNEIDSPDLASWNALIAGVASHSN 279
+FA +F + P LASWN+LI+G
Sbjct: 483 LHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLFGF 542
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCN 338
N A+ ++EM ++ + P+ +T +L AC + +G + + K G C
Sbjct: 543 HNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPESQHCA 602
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+++ M + + A++ + + N DS W ++++AC H + +
Sbjct: 603 SMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGALLSACCIHQEVK 647
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 147/313 (46%), Gaps = 16/313 (5%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
++++ G+I + + +G H + + S D ++ N ++MY K +++
Sbjct: 355 DMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAV 414
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F +M ++ + SW ++I+ C+Q + DA+ L+ QM SG P T S++ AC
Sbjct: 415 FSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQN 474
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G++ G LH +++++ AL+ MY K R+ A NVF + + SW S+I
Sbjct: 475 GNLHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLI 534
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNEID 260
+ + G+ AL + EM+ G +PN+ F + +AC++ + +I+ +
Sbjct: 535 SGYGLFGFHNHALLCYTEMMEKGI-KPNKITFSGILAACTHGGLVEEGRKYFKIMKKKFG 593
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ A + G+ + E +F +++ E PD +LL AC ++Q ++
Sbjct: 594 IVPESQHCASMVGMLGRAGLFEEAIVF--IQNMETNPDSAVWGALLSAC----CIHQEVK 647
Query: 321 VHSYIIKMGFDSN 333
+ + K F SN
Sbjct: 648 LGESVAKKLFFSN 660
>gi|449434412|ref|XP_004134990.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Cucumis sativus]
Length = 704
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 164/538 (30%), Positives = 271/538 (50%), Gaps = 36/538 (6%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
L++Y K G ++ A+ FD P+++VVSW A+I+G ++ +DA KL+++M + P
Sbjct: 104 FLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEMRRREFDPC 163
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
Q T S++ +C G+ +H +K+ +NAL++MY K + + +F
Sbjct: 164 QRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFG 223
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----- 250
I K V SW +MI AF + G EA+ F +ML + N S+ SA +N
Sbjct: 224 EITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEE-SVNANSVTMVSILSANANTGCIH 282
Query: 251 -----------------------------FARILFNEIDSPDLASWNALIAGVASHSNAN 281
A +++ +L + A+I+ A +
Sbjct: 283 CYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMG 342
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
+ L+S ++ ++ D + + ++ + G+ H Y +K G + V N +
Sbjct: 343 SVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFI 402
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+MY+K + +F+E+ K S SWNS+I++C Q ++ + LFS+M S PD
Sbjct: 403 SMYSKFDNIDAVFSLFQEMHKKTLS-SWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDS 461
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
IT ++ AC + +L LHCYI + L + FV L+D+Y+KCG + A +F
Sbjct: 462 ITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKS 521
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
M+ P + SW+SLI GY FG + AL +T M G+ PN +T G+L AC+H GLVEEG
Sbjct: 522 MKEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEG 581
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++IM+ ++GI+P +HC+ +V +L RAG EA FI M + D VW +LL++
Sbjct: 582 RKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGALLSA 639
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 210/480 (43%), Gaps = 50/480 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T L+ +C + + G+ +H + + D ++N +++MYGKC L+ ++ F ++
Sbjct: 166 TLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEI 225
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+++VVSW MI QN ++A+ ++ QML+ V T SI+ A + G +
Sbjct: 226 TEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANTGCI---- 281
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
H + K ++ +L+ Y K I A ++ +K++ + ++I+ +++ G
Sbjct: 282 --HCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKG 339
Query: 217 YELEALCHFNEMLHH---------------GAYQPNEFIFGSVF---------------- 245
++ ++ ++ H G P+ G F
Sbjct: 340 -DMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVA 398
Query: 246 ----SACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
S S F I LF E+ L+SWN++I+ A + +AM+LFS+M
Sbjct: 399 NGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYG 458
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD +T+ SLL AC L+ G +H YI++ D V A++ MY KC + A V
Sbjct: 459 PDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENV 518
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
FK + K SWNS+I+ ++ M+ IKP+ ITF+ ++ AC
Sbjct: 519 FKSM-KEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGL 577
Query: 417 LEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
+E + + K G+ + ++ + + G A ME NPD W +L+
Sbjct: 578 VEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGALL 637
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 129/520 (24%), Positives = 218/520 (41%), Gaps = 85/520 (16%)
Query: 123 LYIQMLQSGVMPGQFTFGSIIKA--------------CSGLGSVCLGRQLHAHVIKSEHG 168
L+ ++L+ V P TF +IKA CS QL H IK
Sbjct: 37 LFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSFCSE-NEKAEANQLQTHFIKWGFD 95
Query: 169 SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
L A + +Y+K + A+ +F KDV SW ++I+ +++ G +A F EM
Sbjct: 96 QFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEM 155
Query: 229 LHHGAYQPNE---------------FIFG-----------------------SVFSACSN 250
+ P + F+ G S++ C++
Sbjct: 156 RRR-EFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCAD 214
Query: 251 F--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCA 308
++LF EI + SWN +I + +EAM +F +M + + + +T+ S+L A
Sbjct: 215 LDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSA 274
Query: 309 -----CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF-KELGK 362
CI H Y K+G NV V +++ Y KC + A L++ +L K
Sbjct: 275 NANTGCI-----------HCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKK 323
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
N V+ +II+ + + RL+S + +K D + ++ + +
Sbjct: 324 NL--VALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLA 381
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGC 482
H Y K+GL D V NG + +Y K ++ + LF M + SW+S+I AQ G
Sbjct: 382 FHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGR 441
Query: 483 GDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMEN--EYGIIPTR 538
+A+ LF++M G P+ +TL +L+AC G + G LH Y + N G + T
Sbjct: 442 SIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVGT- 500
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+VD+ + G + AE+ M + + W SL++
Sbjct: 501 ----ALVDMYVKCGRMDFAENVFKSMK-EPCLASWNSLIS 535
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 153/345 (44%), Gaps = 42/345 (12%)
Query: 80 YGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTF 139
Y KCG +E A + + ++N+V+ TA+I+ ++ ++LY + +
Sbjct: 304 YVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAM 363
Query: 140 GSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR 199
II+ + + +G H + +KS + N I+MY+KFD I ++F + +
Sbjct: 364 VGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHK 423
Query: 200 KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------- 249
K ++SW S+I++ ++ G ++A+ F++M G Y P+ S+ SAC
Sbjct: 424 KTLSSWNSVISSCAQAGRSIDAMALFSQMTLSG-YGPDSITLASLLSACCQNGNLHFGEI 482
Query: 250 ------------------------------NFARILFNEIDSPDLASWNALIAGVASHSN 279
+FA +F + P LASWN+LI+G
Sbjct: 483 LHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLFGF 542
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCN 338
N A+ ++EM ++ + P+ +T +L AC + +G + + K G C
Sbjct: 543 HNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPESQHCA 602
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+++ M + + A++ + + N DS W ++++AC H + +
Sbjct: 603 SMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGALLSACCIHQEVK 647
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 147/313 (46%), Gaps = 16/313 (5%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
++++ G+I + + +G H + + S D ++ N ++MY K +++
Sbjct: 355 DMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAV 414
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F +M ++ + SW ++I+ C+Q + DA+ L+ QM SG P T S++ AC
Sbjct: 415 FSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQN 474
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G++ G LH +++++ AL+ MY K R+ A NVF + + SW S+I
Sbjct: 475 GNLHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLI 534
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNEID 260
+ + G+ AL + EM+ G +PN+ F + +AC++ + +I+ +
Sbjct: 535 SGYGLFGFHNHALLCYTEMMEKGI-KPNKITFSGILAACTHGGLVEEGRKYFKIMKKKFG 593
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ A + G+ + E +F +++ E PD +LL AC ++Q ++
Sbjct: 594 IVPESQHCASMVGMLGRAGLFEEAIVF--IQNMETNPDSAVWGALLSAC----CIHQEVK 647
Query: 321 VHSYIIKMGFDSN 333
+ + K F SN
Sbjct: 648 LGESVAKKLFFSN 660
>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 173/569 (30%), Positives = 288/569 (50%), Gaps = 45/569 (7%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCG-SLEDARMGFDKMPQRNVVSWTAMIAGCS 112
G+++H +L + D L+ +++MY K G S++ R+ + + NVV W MI G
Sbjct: 189 GKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFG 248
Query: 113 QNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
+ ++ LY+ + V +F + ACS + GRQ+H V+K +
Sbjct: 249 GSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPY 308
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
+L++MY+K + +A VFS + K + W +M+AA+++ Y AL F M
Sbjct: 309 VCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFM-RQK 367
Query: 233 AYQPNEFIFGSVFSACS-----NFAR---------------------------------- 253
+ P+ F +V S CS N+ +
Sbjct: 368 SVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDA 427
Query: 254 -ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE--LLPDGLTVHSLLCACI 310
++F ++ D+ +W +LI+G+ + EA+ +F +M+D + L PD + S+ AC
Sbjct: 428 YLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACA 487
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
G L G+QVH +IK G NV V ++++ +Y+KC + AL VF + + V+WN
Sbjct: 488 GLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSM-STENMVAWN 546
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
S+I+ ++N E LF+ ML+ I PD ++ V+ A + ASL LH Y +
Sbjct: 547 SMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRL 606
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
G+ D + N L+D+Y+KCG A +F M++ +++W+ +I GY G AL LF
Sbjct: 607 GIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLF 666
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
M+ G SP+ VT + +++AC+H G VEEG +++ M+ +YGI P EH + +VDLL R
Sbjct: 667 DEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGR 726
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
AG + EA FI M +AD +W LL++
Sbjct: 727 AGLLEEAYSFIKAMPIEADSSIWLCLLSA 755
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 173/628 (27%), Positives = 293/628 (46%), Gaps = 66/628 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + +L ++ Y +AL Y ++ T+ L+ ACS+L +L G+ +H ++
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ-------RNVVSWTAMIAGCSQNY 115
+ + D + ++NMY KCG L+ A FD Q R+V W +MI G +
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFR 147
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL--GRQLHAHVIKSEHGSHLIA 173
+ + + + +ML GV P F+ ++ G+ G+Q+H ++++ +
Sbjct: 148 RFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFL 207
Query: 174 QNALIAMYTKFDRILDARNVFSGIARK-DVTSWGSMIAAFS------------------- 213
+ ALI MY KF +DA VF I K +V W MI F
Sbjct: 208 KTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNS 267
Query: 214 -KL------------------GYELEALCHFNEM-LHHGAYQPNEFIFGSVFSACS--NF 251
KL G+ + C +M LH+ Y + S++S C
Sbjct: 268 VKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLL--SMYSKCGMVGE 325
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
A +F+ + L WNA++A A + A+ LF MR + +LPD T+ +++ +C
Sbjct: 326 AETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVI-SCCS 384
Query: 312 RLTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
L LY G VH+ + K S + +A+LT+Y+KC +A LVFK + + D V+W
Sbjct: 385 VLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSM-EEKDMVAWG 443
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQ--IKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
S+I+ ++ + +E ++F M +KPD V ACA + +L Q+H +
Sbjct: 444 SLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMI 503
Query: 429 KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
KTGL +VFV + L+D+Y KCG A K+F M ++V+W+S+I Y++ + ++
Sbjct: 504 KTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSID 563
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHC-SCVV 545
LF M S G+ P+ V++ VL A S + +G LH Y + IP+ H + ++
Sbjct: 564 LFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLG----IPSDTHLKNALI 619
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVW 573
D+ + G AE+ +M ++ W
Sbjct: 620 DMYVKCGFSKYAENIFKKMQ-HKSLITW 646
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 205/435 (47%), Gaps = 43/435 (9%)
Query: 18 ALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHIL 77
+L Y ++NN+ +++ +++ G + ACS + GR++H ++ D + +L
Sbjct: 256 SLDLYMLAKNNS-VKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLL 314
Query: 78 NMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQF 137
+MY KCG + +A F + + + W AM+A ++N A+ L+ M Q V+P F
Sbjct: 315 SMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSF 374
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
T ++I CS LG G+ +HA + K S ++AL+ +Y+K DA VF +
Sbjct: 375 TLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSM 434
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEML-HHGAYQPNEFIFGSVFSACSNFARI-- 254
KD+ +WGS+I+ K G EAL F +M + +P+ I SV +AC+ +
Sbjct: 435 EEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRF 494
Query: 255 --------------------------------------LFNEIDSPDLASWNALIAGVAS 276
+F + + ++ +WN++I+ +
Sbjct: 495 GLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSR 554
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
++ ++ LF+ M + + PD +++ S+L A +L +G +H Y +++G S+ +
Sbjct: 555 NNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHL 614
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
NA++ MY KC A +FK++ ++ ++WN +I H LF M +
Sbjct: 615 KNALIDMYVKCGFSKYAENIFKKM-QHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAG 673
Query: 397 IKPDHITFNDVMGAC 411
PD +TF ++ AC
Sbjct: 674 ESPDDVTFLSLISAC 688
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 153/323 (47%), Gaps = 6/323 (1%)
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT---VHSLLCACIGRLTL 315
+ + D+ WN++I G E + F M + PD + V S++C G
Sbjct: 128 VSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK-EGNFRR 186
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
+G Q+H ++++ D++ + A++ MY K + +A VF E+ ++ V WN +I
Sbjct: 187 EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
E L+ + +K +F +GAC++ + Q+HC + K GL D
Sbjct: 247 FGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHND 306
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
+V L+ +Y KCG +G A +F+ + + + W++++ YA+ G AL LF MR
Sbjct: 307 PYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQ 366
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
V P+ TL V++ CS +GL G ++ + I T S ++ L ++ GC
Sbjct: 367 KSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR-PIQSTSTIESALLTLYSKCGCDP 425
Query: 556 EAEDFINQMACDADIVVWKSLLA 578
+A M + D+V W SL++
Sbjct: 426 DAYLVFKSME-EKDMVAWGSLIS 447
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 165/540 (30%), Positives = 274/540 (50%), Gaps = 65/540 (12%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N +L+ Y K G ++ FD++PQR+ VSWT MI G Q + AI++ M++ G+
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P QFT +++ + + + G+++H+ ++K ++ N+L+ MY K + A+ V
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR 253
F + +D++SW +MIA ++G A+ F +M
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER---------------------- 241
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGR 312
D+ +WN++I+G A+ +FS+M RD L PD T+ S+L AC
Sbjct: 242 ---------DIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANL 292
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG----------- 361
L G Q+HS+I+ GFD + V NA+++MY++C + A + ++ G
Sbjct: 293 EKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTA 352
Query: 362 ---------------------KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
K+ D V+W ++I QH E LF M+ +P+
Sbjct: 353 LLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPN 412
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T ++ + +ASL Q+H K+G + V V N L+ +Y K G++ SA + F+
Sbjct: 413 SYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFD 472
Query: 461 FME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ D VSW+S+I+ AQ G +EAL+LF M G+ P+ +T VGV +AC+H GLV
Sbjct: 473 LIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVN 532
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+G + +M++ IIPT H +C+VDL RAG + EA++FI +M + D+V W SLL++
Sbjct: 533 QGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 144/586 (24%), Positives = 236/586 (40%), Gaps = 147/586 (25%)
Query: 35 PSTYAGLISACSSLRSLQLGRK--------VHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
P + + L+ C++L + + VH ++ S V L N+++N+Y K G
Sbjct: 6 PLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYA 65
Query: 87 EDARMGFDKMPQRNV-------------------------------VSWTAMIAGCSQNY 115
AR FD+MP R VSWT MI G
Sbjct: 66 LHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIG 125
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
Q + AI++ M++ G+ P QFT +++ + + + G+++H+ ++K ++ N
Sbjct: 126 QYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSN 185
Query: 176 ALIAMYTK----------FDRILDARNV----------------------FSGIARKDVT 203
+L+ MY K FDR++ R++ F +A +D+
Sbjct: 186 SLLNMYAKCGDPMMAKFVFDRMV-VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------ 251
+W SMI+ F++ GY+L AL F++ML P+ F SV SAC+N
Sbjct: 245 TWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH 304
Query: 252 ----------------------------ARILFNEIDSPDLA--SWNALIAGVASHSNAN 281
AR L + + DL + AL+ G + N
Sbjct: 305 IVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMN 364
Query: 282 EAMSLFSEMRDRELL-------------------------------PDGLTVHSLLCACI 310
+A ++F ++DR+++ P+ T+ ++L
Sbjct: 365 QAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVAS 424
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
+L G Q+H +K G +V V NA++TMYAK + +A F + D+VSW
Sbjct: 425 SLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWT 484
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
S+I A QH AEE LF ML ++PDHIT+ V AC + Q +
Sbjct: 485 SMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDV 544
Query: 431 GLAFDVFVMNGLM-DIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
M D++ + G L A++ M PDVV+W SL+
Sbjct: 545 DKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLL 590
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 197/459 (42%), Gaps = 114/459 (24%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I P+ T ++++ ++ R ++ G+KVH I+ + +V + N +LNMY KCG A+
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 91 MGFDKM-------------------------------PQRNVVSWTAMIAGCSQNYQEND 119
FD+M +R++V+W +MI+G +Q +
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261
Query: 120 AIKLYIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
A+ ++ +ML+ ++ P +FT S++ AC+ L +C+G+Q+H+H++ + I NALI
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321
Query: 179 AMYTK-----------------------FDRILD----------ARNVFSGIARKDVTSW 205
+MY++ F +LD A+N+F + +DV +W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF------------------------ 241
+MI + + G EA+ F M+ G +PN +
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVG-GGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 242 --GSVFSACSNFARIL--------------FNEID-SPDLASWNALIAGVASHSNANEAM 284
G ++S + A I F+ I D SW ++I +A H +A EA+
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN---AIL 341
LF M L PD +T + AC + QG Q + + D +P + ++
Sbjct: 501 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSHYACMV 558
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
++ + +L A +++ D V+W S+++AC H
Sbjct: 559 DLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHK 597
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 33/187 (17%)
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM-------------------- 462
+HC + K+GL F V++MN LM++Y K G ARKLF+ M
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 463 -----------ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
D VSW+++I+GY G +A+++ M G+ P TL VL +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
+ +E G ++ + + G+ + ++++ A+ G A+ ++M DI
Sbjct: 156 VAATRCMETGKKVHSFIV-KLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVV-RDIS 213
Query: 572 VWKSLLA 578
W +++A
Sbjct: 214 SWNAMIA 220
>gi|224137486|ref|XP_002327138.1| predicted protein [Populus trichocarpa]
gi|222835453|gb|EEE73888.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 159/515 (30%), Positives = 268/515 (52%), Gaps = 34/515 (6%)
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M R++VSW A+I GCS+N + DA+++++Q+L+ G P Q T ++ +C V G
Sbjct: 1 MLDRDIVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQG 60
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R +H IK+ +NAL MY K + A +F + K V SW +MI A++
Sbjct: 61 RSIHGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAGN 120
Query: 216 GYELEALCHFN------------------------EMLHHGAYQPNEFIFGSV------- 244
G+ E++ F E++H A + GSV
Sbjct: 121 GFFNESMLVFKRMVEQKVEVNPVTIMSLLPANISPELIHCYAIKTGLINNGSVVTSLVCL 180
Query: 245 FSAC--SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
++ C + A +L+ +L S A+I+ A N + + FS M+ ++ D + +
Sbjct: 181 YAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQLDMKLDSVAM 240
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
S+L + G+ +H Y +K G D++ V N +++MY K + + A+ +F E+ +
Sbjct: 241 VSILHGITDPSHMSIGIALHGYALKNGLDTHNLVSNGLISMYFKFNDIEAAISLFYEMPE 300
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
+SWNS+I+ C+Q +A + + F +M + PD IT ++ C+++ L + +
Sbjct: 301 KP-LISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPDTITVASLLTGCSQLGYLRLGER 359
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGC 482
LH YI + L + FV L+D+Y KCGS+ A ++F + P V +W+++I GY+ +G
Sbjct: 360 LHNYILRNNLEVEDFVGTSLIDMYTKCGSILLAERVFKSIREPCVATWNTMISGYSWYGL 419
Query: 483 GDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCS 542
AL +++MR G+ P+ +T +GVL AC H GL+ EG ++IM E+G++P +HC+
Sbjct: 420 EHNALNCYSKMREQGLEPDRITFLGVLAACIHGGLLHEGKKHFQIMTEEFGMVPNLQHCA 479
Query: 543 CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
C+V LL RAG EA FI M + D VW +LL
Sbjct: 480 CMVGLLGRAGLFEEALLFIKNMESEPDSAVWGALL 514
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 185/416 (44%), Gaps = 48/416 (11%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T GL+ +C + GR +H + + D ++N + MY K G LE A + F++
Sbjct: 42 TTLVGLVPSCGRREFVFQGRSIHGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEE 101
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ ++VVSW MI + N N+++ ++ +M++ V T S++ A
Sbjct: 102 LEDKSVVSWNTMIGAYAGNGFFNESMLVFKRMVEQKVEVNPVTIMSLLPANIS------P 155
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+H + IK+ ++ +L+ +Y K A ++ +K++ S ++I+++++
Sbjct: 156 ELIHCYAIKTGLINNGSVVTSLVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEK 215
Query: 216 G-YELEALCHFNEM--------------LHHGAYQPNEFIFG------------------ 242
G +L C F+ M + HG P+ G
Sbjct: 216 GNMDLVVEC-FSRMQQLDMKLDSVAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNLV 274
Query: 243 --SVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+ S F I LF E+ L SWN++I+G A++AM F +M+ L
Sbjct: 275 SNGLISMYFKFNDIEAAISLFYEMPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGL 334
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD +TV SLL C L G ++H+YI++ + V +++ MY KC + A
Sbjct: 335 SPDTITVASLLTGCSQLGYLRLGERLHNYILRNNLEVEDFVGTSLIDMYTKCGSILLAER 394
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
VFK + + +WN++I+ + +S+M ++PD ITF V+ AC
Sbjct: 395 VFKSI-REPCVATWNTMISGYSWYGLEHNALNCYSKMREQGLEPDRITFLGVLAAC 449
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 184/421 (43%), Gaps = 51/421 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + + +NE+++ + + + P T L+ A S +H + +
Sbjct: 111 NTMIGAYAGNGFFNESMLVFK-RMVEQKVEVNPVTIMSLLPANIS------PELIHCYAI 163
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + + ++ +Y KCGS E A + + PQ+N+VS TA+I+ ++ + ++
Sbjct: 164 KTGLINNGSVVTSLVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVE 223
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ +M Q + SI+ + + +G LH + +K+ +H + N LI+MY
Sbjct: 224 CFSRMQQLDMKLDSVAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNLVSNGLISMYF 283
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
KF+ I A ++F + K + SW S+I+ + G +A+ F +M G P+
Sbjct: 284 KFNDIEAAISLFYEMPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFG-LSPDTITVA 342
Query: 243 SVFSACSN----------------------------------------FARILFNEIDSP 262
S+ + CS A +F I P
Sbjct: 343 SLLTGCSQLGYLRLGERLHNYILRNNLEVEDFVGTSLIDMYTKCGSILLAERVFKSIREP 402
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+A+WN +I+G + + + A++ +S+MR++ L PD +T +L ACI L++G + H
Sbjct: 403 CVATWNTMISGYSWYGLEHNALNCYSKMREQGLEPDRITFLGVLAACIHGGLLHEGKK-H 461
Query: 323 SYII--KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
I+ + G N+ C ++ + + + ALL K + DS W +++ AC H
Sbjct: 462 FQIMTEEFGMVPNLQHCACMVGLLGRAGLFEEALLFIKNMESEPDSAVWGALLNACCIHQ 521
Query: 381 Q 381
+
Sbjct: 522 E 522
>gi|302811004|ref|XP_002987192.1| hypothetical protein SELMODRAFT_41818 [Selaginella moellendorffii]
gi|300145089|gb|EFJ11768.1| hypothetical protein SELMODRAFT_41818 [Selaginella moellendorffii]
Length = 535
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 167/535 (31%), Positives = 270/535 (50%), Gaps = 44/535 (8%)
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
L N ++ YGKC S+ DAR FD + + NV SWT +IA ++N +A++ + +M Q G
Sbjct: 1 LANMLVLAYGKCRSVSDARKVFDGIEEPNVFSWTVIIAAYAENKDHREAVQFFRRMNQEG 60
Query: 132 VMPGQFTFGSIIKACSG-LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
V Q T +++ +CS L + GR +H + S ++ Q AL+ MY K+ R+ +A
Sbjct: 61 VRANQVTLITVLSSCSASLDRLADGRTVHGCITGSSFETYRPLQTALVNMYGKYGRVREA 120
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
R VF G+A +DV +W +MI A+++ G+ +A ++ M G +PNE F ++ AC +
Sbjct: 121 RAVFDGMAERDVITWSAMITAYAQGGHGRQAWSMYHGMSLDGV-KPNEVTFVAICEACCS 179
Query: 251 F----------------------------------------ARILFNEIDSPDLASWNAL 270
F AR F+ I D+ SW+ +
Sbjct: 180 FPSFLEREALVEHVYESGYDCYTIVGNSIANMFSKCGDPSSARQAFDRIPRKDVVSWSVV 239
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I+ + H A+E + LF M + P+ T+ + L AC G VH +G
Sbjct: 240 ISSLTQHELADEGLLLFRAMLAEGVAPNHATLVNCLDACSFSKNFGDGRVVHGVAKSLGM 299
Query: 331 DSNVPV-CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
+S+ PV A+L MY++C L +A +F+++ D V+W ++I+A Q +++ +LF
Sbjct: 300 ESSSPVVATAVLDMYSRCGSLVDAKRMFEKISSR-DVVAWTAMISAYQQEGLSDQAMKLF 358
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
M ++P+ TF ++ C SL +H I + GL V N L+ Y +
Sbjct: 359 RSMDLDGVRPNETTFMRLVAVCMDQNSLARGRMIHSRIVEEGLEASTSVSNALITFYGQS 418
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
GSL A ++F M ++SW+++I +AQ AL+L+ RM G+ P+ VT + +L
Sbjct: 419 GSLAEASRVFGRMAAATLISWTAIISAFAQHSHSQRALELYQRMDLEGIKPDDVTFITIL 478
Query: 510 TACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
ACSH G+VEEG + M ++GI + +H C+VDLL RAG + EAE M
Sbjct: 479 FACSHSGMVEEGRRYFLAMVGDHGIESSVQHLDCLVDLLGRAGWLEEAEKLARSM 533
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 229/505 (45%), Gaps = 45/505 (8%)
Query: 1 FSNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACS-SLRSLQLGRKVHD 59
FS + + +N + V + N +R T ++S+CS SL L GR VH
Sbjct: 31 FSWTVIIAAYAENKDHREAVQFFRRMNQEGVRANQVTLITVLSSCSASLDRLADGRTVHG 90
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
I S + LQ ++NMYGK G + +AR FD M +R+V++W+AMI +Q
Sbjct: 91 CITGSSFETYRPLQTALVNMYGKYGRVREARAVFDGMAERDVITWSAMITAYAQGGHGRQ 150
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
A +Y M GV P + TF +I +AC S L HV +S + + I N++
Sbjct: 151 AWSMYHGMSLDGVKPNEVTFVAICEACCSFPSFLEREALVEHVYESGYDCYTIVGNSIAN 210
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
M++K AR F I RKDV SW +I++ ++ E L F ML G PN
Sbjct: 211 MFSKCGDPSSARQAFDRIPRKDVVSWSVVISSLTQHELADEGLLLFRAMLAEGV-APNHA 269
Query: 240 IFGSVFSACS---NF--------------------------------------ARILFNE 258
+ ACS NF A+ +F +
Sbjct: 270 TLVNCLDACSFSKNFGDGRVVHGVAKSLGMESSSPVVATAVLDMYSRCGSLVDAKRMFEK 329
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
I S D+ +W A+I+ +++AM LF M + P+ T L+ C+ + +L +G
Sbjct: 330 ISSRDVVAWTAMISAYQQEGLSDQAMKLFRSMDLDGVRPNETTFMRLVAVCMDQNSLARG 389
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
+HS I++ G +++ V NA++T Y + L A VF + A +SW +II+A Q
Sbjct: 390 RMIHSRIVEEGLEASTSVSNALITFYGQSGSLAEASRVFGRMAA-ATLISWTAIISAFAQ 448
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH-CYITKTGLAFDVF 437
H+ ++ L+ RM IKPD +TF ++ AC+ +E + + G+ V
Sbjct: 449 HSHSQRALELYQRMDLEGIKPDDVTFITILFACSHSGMVEEGRRYFLAMVGDHGIESSVQ 508
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFM 462
++ L+D+ + G L A KL M
Sbjct: 509 HLDCLVDLLGRAGWLEEAEKLARSM 533
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 183/588 (31%), Positives = 289/588 (49%), Gaps = 49/588 (8%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y L+ S S G+ H H++ + P + L N+ LN+Y K G + +A+ FD+M
Sbjct: 12 YTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMS 71
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+R+V+S+ +I+G + AI L+ + + + +F++ ++ AC + LG+
Sbjct: 72 ERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKV 131
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H I G + N LI MY K +RI AR +F D SW S+I ++++G
Sbjct: 132 IHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGA 191
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSAC----------------------------- 248
E L +M HH + N F GS +C
Sbjct: 192 YEEMLKLLVKM-HHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVV 250
Query: 249 -----SNFARI--------LFNEIDSPDLASWNALIAGVASHSN-----ANEAMSLFSEM 290
+A+ LF + ++ +NA+IAG + A EA+ LFS+M
Sbjct: 251 GTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQM 310
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ + + P T S++ C G Q+H++I K S+ + + ++ +Y+
Sbjct: 311 QRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGST 370
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
+ L F K D VSW ++IA Q+ Q E LF +LAS KPD ++ A
Sbjct: 371 EDQLKCFNSTPK-LDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSA 429
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
CA +A+ Q+H Y KTG+ V N + +Y K G+L SA+ F ++NPDVVSW
Sbjct: 430 CADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSW 489
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
S +I AQ G +A+ LF M+S G+ PN +T +GVLTACSH GLVEEGL Y M+
Sbjct: 490 SVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKK 549
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+Y + +HC+C+VDLL+RAG + +A++FI V+W++LL+
Sbjct: 550 DYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLS 597
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 134/497 (26%), Positives = 231/497 (46%), Gaps = 55/497 (11%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+++ +YAG++SAC ++ LG+ +H ++ V L N +++MY KC ++ AR
Sbjct: 106 LKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHAR 165
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS-GL 149
+ F+ + + VSW ++I G ++ + +KL ++M +G+ FT GS +K+C L
Sbjct: 166 LLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNL 225
Query: 150 GS-VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+ V G+ LH + +K ++ AL+ MY K + DA +F ++V + +M
Sbjct: 226 NNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAM 285
Query: 209 IAAF---SKLGYE--LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------- 254
IA F + E EAL F++M G +P++F F S+ C++
Sbjct: 286 IAGFIQTEDIDKECAYEALKLFSQMQRQGI-KPSDFTFSSIIKICNHIEAFEYGKQIHAH 344
Query: 255 -------------------------------LFNEIDSPDLASWNALIAGVASHSNANEA 283
FN D+ SW +IAG A + A
Sbjct: 345 ICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESA 404
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
++LF E+ PD + ++L AC G QVH Y +K G + V N+ ++M
Sbjct: 405 LALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISM 464
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
YAK L +A + F+E+ KN D VSW+ +I + QH A++ LF M + I P+ IT
Sbjct: 465 YAKSGNLDSAKITFEEI-KNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQIT 523
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLF--- 459
F V+ AC+ +E + + + K + +V ++D+ + G L A+
Sbjct: 524 FLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNS 583
Query: 460 NFMENPDVVSWSSLILG 476
F ++P V W +L+ G
Sbjct: 584 GFGDHP--VMWRTLLSG 598
>gi|115458508|ref|NP_001052854.1| Os04g0436800 [Oryza sativa Japonica Group]
gi|38344064|emb|CAD40816.2| OSJNBa0006B20.8 [Oryza sativa Japonica Group]
gi|113564425|dbj|BAF14768.1| Os04g0436800 [Oryza sativa Japonica Group]
gi|116310780|emb|CAH67572.1| H0315A08.2 [Oryza sativa Indica Group]
gi|215704891|dbj|BAG94919.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194892|gb|EEC77319.1| hypothetical protein OsI_15984 [Oryza sativa Indica Group]
Length = 717
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 169/573 (29%), Positives = 284/573 (49%), Gaps = 36/573 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S+ + EA+ + + N+ +R + T A ++ C+ L R++H HI
Sbjct: 122 NAIISAYSRGEEPTEAISLFS-AMNSCGVRPKDVTLASVLGCCAECLDLHGARQLHGHIA 180
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
Q +V+L ++++YGKC +L +AR FD +P+ N +SW +I + AI
Sbjct: 181 KRDFQSNVILGTALVDVYGKCFALSEARRAFDGIPKPNDISWNVIIRRYLLAGMGDMAID 240
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ +M+ +GV P +T + AC G++ GR++H V++ + H+ +++++ MY
Sbjct: 241 MFFRMVWAGVSPLVYTVSQALLACRDNGALEEGRRIHTFVLRHGYEQHVHVRSSVVDMYA 300
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I A+ +F KD+ S+++ + G +A F M H
Sbjct: 301 KCGAIDLAQRLFDLAPVKDIVMSTSIVSGLASCGRITDAKRVFEGMEEH----------- 349
Query: 243 SVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
+L SWNA++ G + A+ LF +MR D +T+
Sbjct: 350 --------------------NLVSWNAMLTGYVRSMDLTSALQLFQQMRQETKELDAVTL 389
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA--LLVFKEL 360
+L AC G L L +G +VH++ K GF + NA+L MY+KC L +A LL+F E+
Sbjct: 390 GCVLNACTGLLDLGKGEEVHTFAFKSGFIGYPFLKNALLRMYSKCGCLRSAERLLLF-EM 448
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
G DS SWNS+I+ +H+ +E S M + P+ TF+ + ACA + L
Sbjct: 449 GSERDSYSWNSLISGYERHSMSEAALLALSEM-HYEATPNQSTFSSALAACANIFLLNHG 507
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
Q+H Y+ + G D + + L+D+Y KC + ++F + DV+ W+S+I G A
Sbjct: 508 KQIHAYMIRNGYVIDDILQSALIDMYSKCRLFDYSMRIFEAGPSQDVILWNSMIFGCAYN 567
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
G G+ L+LF M G++P+ VT +G L +C G V G + M +EY I+P EH
Sbjct: 568 GKGEYGLELFFEMSKQGITPDSVTFLGALVSCISEGHVGLGRSYFTQMTDEYNIVPRIEH 627
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
C+++LL + G + E EDFI M + +W
Sbjct: 628 YECMIELLGKHGYMVELEDFIGHMPFEPTTAMW 660
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 181/389 (46%), Gaps = 47/389 (12%)
Query: 231 HGAYQPNEFIFGSV---FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
H + F+F +AC + AR LF+ + D SWNA+I+ + EA+S
Sbjct: 80 HSFTATSTFLFNRAVESLAACGSLTDARKLFDAMPRRDGGSWNAIISAYSRGEEPTEAIS 139
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
LFS M + P +T+ S+L C L L+ Q+H +I K F SNV + A++ +Y
Sbjct: 140 LFSAMNSCGVRPKDVTLASVLGCCAECLDLHGARQLHGHIAKRDFQSNVILGTALVDVYG 199
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
KC L A F + K D +SWN II L + +F RM+ + + P T +
Sbjct: 200 KCFALSEARRAFDGIPKPND-ISWNVIIRRYLLAGMGDMAIDMFFRMVWAGVSPLVYTVS 258
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF---- 461
+ AC +LE ++H ++ + G V V + ++D+Y KCG++ A++LF+
Sbjct: 259 QALLACRDNGALEEGRRIHTFVLRHGYEQHVHVRSSVVDMYAKCGAIDLAQRLFDLAPVK 318
Query: 462 ---------------------------MENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
ME ++VSW++++ GY + AL+LF +MR
Sbjct: 319 DIVMSTSIVSGLASCGRITDAKRVFEGMEEHNLVSWNAMLTGYVRSMDLTSALQLFQQMR 378
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVE----EGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
+ VTL VL AC+ GL++ E +H + + G I + ++ + ++
Sbjct: 379 QETKELDAVTLGCVLNACT--GLLDLGKGEEVHTFAF---KSGFIGYPFLKNALLRMYSK 433
Query: 551 AGCVHEAED-FINQMACDADIVVWKSLLA 578
GC+ AE + +M + D W SL++
Sbjct: 434 CGCLRSAERLLLFEMGSERDSYSWNSLIS 462
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 113/256 (44%), Gaps = 36/256 (14%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + ++ AL+A S+ + ST++ ++AC+++ L G+++H +++
Sbjct: 458 NSLISGYERHSMSEAALLA--LSEMHYEATPNQSTFSSALAACANIFLLNHGKQIHAYMI 515
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D +LQ+ +++MY KC + + F+ P ++V+ W +MI GC+ N + ++
Sbjct: 516 RNGYVIDDILQSALIDMYSKCRLFDYSMRIFEAGPSQDVILWNSMIFGCAYNGKGEYGLE 575
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ +M + G+ P TF + +C G V LGR +
Sbjct: 576 LFFEMSKQGITPDSVTFLGALVSCISEGHVGLGR-------------------------S 610
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
F ++ D N+ I + MI K GY +E + + H ++P ++
Sbjct: 611 YFTQMTDEYNIVPRIEHYEC-----MIELLGKHGYMVE----LEDFIGHMPFEPTTAMWL 661
Query: 243 SVFSACSNFARILFNE 258
+F C + E
Sbjct: 662 RIFDCCREYGNRKLGE 677
>gi|222628911|gb|EEE61043.1| hypothetical protein OsJ_14892 [Oryza sativa Japonica Group]
Length = 717
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 169/573 (29%), Positives = 284/573 (49%), Gaps = 36/573 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S+ + EA+ + + N+ +R + T A ++ C+ L R++H HI
Sbjct: 122 NAIISAYSRGEEPTEAISLFS-AMNSCGVRPKDVTLASVLGCCAECLDLHGARQLHGHIA 180
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
Q +V+L ++++YGKC +L +AR FD +P+ N +SW +I + AI
Sbjct: 181 KRDFQSNVILGTALVDVYGKCFALSEARRAFDGIPKPNDISWNVIIRRYLLAGMGDLAID 240
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ +M+ +GV P +T + AC G++ GR++H V++ + H+ +++++ MY
Sbjct: 241 MFFRMVWAGVSPLVYTVSQALLACRDNGALEEGRRIHTFVLRHGYEQHVHVRSSVVDMYA 300
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I A+ +F KD+ S+++ + G +A F M H
Sbjct: 301 KCGAIDLAQRLFDLAPVKDIVMSTSIVSGLASCGRITDAKRVFEGMEEH----------- 349
Query: 243 SVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
+L SWNA++ G + A+ LF +MR D +T+
Sbjct: 350 --------------------NLVSWNAMLTGYVRSMDLTSALQLFQQMRQETKELDAVTL 389
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA--LLVFKEL 360
+L AC G L L +G +VH++ K GF + NA+L MY+KC L +A LL+F E+
Sbjct: 390 GCVLNACTGLLDLGKGEEVHTFAFKSGFIGYPFLKNALLRMYSKCGCLRSAERLLLF-EM 448
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
G DS SWNS+I+ +H+ +E S M + P+ TF+ + ACA + L
Sbjct: 449 GSERDSYSWNSLISGYERHSMSEAALLALSEM-HYEATPNQSTFSSALAACANIFLLNHG 507
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
Q+H Y+ + G D + + L+D+Y KC + ++F + DV+ W+S+I G A
Sbjct: 508 KQIHAYMIRNGYVIDDILQSALIDMYSKCRLFDYSMRIFEAGPSQDVILWNSMIFGCAYN 567
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
G G+ L+LF M G++P+ VT +G L +C G V G + M +EY I+P EH
Sbjct: 568 GKGEYGLELFFEMSKQGITPDSVTFLGALVSCISEGHVGLGRSYFTQMTDEYNIVPRIEH 627
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
C+++LL + G + E EDFI M + +W
Sbjct: 628 YECMIELLGKHGYMVELEDFIGHMPFEPTTAMW 660
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 181/389 (46%), Gaps = 47/389 (12%)
Query: 231 HGAYQPNEFIFGSV---FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
H + F+F +AC + AR LF+ + D SWNA+I+ + EA+S
Sbjct: 80 HSFTATSTFLFNRAVESLAACGSLTDARKLFDAMPRRDGGSWNAIISAYSRGEEPTEAIS 139
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
LFS M + P +T+ S+L C L L+ Q+H +I K F SNV + A++ +Y
Sbjct: 140 LFSAMNSCGVRPKDVTLASVLGCCAECLDLHGARQLHGHIAKRDFQSNVILGTALVDVYG 199
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
KC L A F + K D +SWN II L + +F RM+ + + P T +
Sbjct: 200 KCFALSEARRAFDGIPKPND-ISWNVIIRRYLLAGMGDLAIDMFFRMVWAGVSPLVYTVS 258
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF---- 461
+ AC +LE ++H ++ + G V V + ++D+Y KCG++ A++LF+
Sbjct: 259 QALLACRDNGALEEGRRIHTFVLRHGYEQHVHVRSSVVDMYAKCGAIDLAQRLFDLAPVK 318
Query: 462 ---------------------------MENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
ME ++VSW++++ GY + AL+LF +MR
Sbjct: 319 DIVMSTSIVSGLASCGRITDAKRVFEGMEEHNLVSWNAMLTGYVRSMDLTSALQLFQQMR 378
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVE----EGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
+ VTL VL AC+ GL++ E +H + + G I + ++ + ++
Sbjct: 379 QETKELDAVTLGCVLNACT--GLLDLGKGEEVHTFAF---KSGFIGYPFLKNALLRMYSK 433
Query: 551 AGCVHEAED-FINQMACDADIVVWKSLLA 578
GC+ AE + +M + D W SL++
Sbjct: 434 CGCLRSAERLLLFEMGSERDSYSWNSLIS 462
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 113/256 (44%), Gaps = 36/256 (14%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + ++ AL+A S+ + ST++ ++AC+++ L G+++H +++
Sbjct: 458 NSLISGYERHSMSEAALLA--LSEMHYEATPNQSTFSSALAACANIFLLNHGKQIHAYMI 515
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D +LQ+ +++MY KC + + F+ P ++V+ W +MI GC+ N + ++
Sbjct: 516 RNGYVIDDILQSALIDMYSKCRLFDYSMRIFEAGPSQDVILWNSMIFGCAYNGKGEYGLE 575
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ +M + G+ P TF + +C G V LGR +
Sbjct: 576 LFFEMSKQGITPDSVTFLGALVSCISEGHVGLGR-------------------------S 610
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
F ++ D N+ I + MI K GY +E + + H ++P ++
Sbjct: 611 YFTQMTDEYNIVPRIEHYEC-----MIELLGKHGYMVE----LEDFIGHMPFEPTTAMWL 661
Query: 243 SVFSACSNFARILFNE 258
+F C + E
Sbjct: 662 RIFDCCREYGNRKLGE 677
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/489 (31%), Positives = 257/489 (52%), Gaps = 34/489 (6%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F + + N +SW MI G + + A+ LY+ M+ G+ P +TF + K+C+ +
Sbjct: 35 FKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAA 94
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+Q+HA ++K L +LI+MY + + DA VF + +DV S+ +MI +
Sbjct: 95 QEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGY 154
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
+ G +A F+E I D+ SWNA+I+
Sbjct: 155 ASRGNMDKAQKMFDE-------------------------------IPIKDVVSWNAMIS 183
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A EA+ LF+EM ++ PD T+ ++L C + G Q+HS+I GF S
Sbjct: 184 GYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGS 243
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N+ + NA++ +Y+KC + A +F+ L + D +SWN++I N +E +F M
Sbjct: 244 NLKLVNALIDLYSKCGEMERAHGLFEGL-QYKDVISWNTLIGGYAYINHHKEALLVFQEM 302
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFDVFVMNGLMDIYIKCG 450
L P+ +T ++ ACA + ++++ +H YI K G+ + + L+D+Y KCG
Sbjct: 303 LKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCG 362
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
++ +A ++F+ + N + S +++I G+A G D A L +RM+ G+ P+ +T VG+L+
Sbjct: 363 NIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLS 422
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSH GL + G +++ M +Y I P EH C++DLL R+G EAE+ IN M + D
Sbjct: 423 ACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDG 482
Query: 571 VVWKSLLAS 579
V+W SLL +
Sbjct: 483 VIWGSLLKA 491
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 168/339 (49%), Gaps = 33/339 (9%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+A +F I P+ SWN +I G A S+ A++L+ M L P+ T L +C
Sbjct: 30 YAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCA 89
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN------- 363
+G Q+H+ I+K G ++ V ++++MYA+ ++ +A VF
Sbjct: 90 KSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTA 149
Query: 364 -----------------------ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
D VSWN++I+ + + +E LF+ M+ +KPD
Sbjct: 150 MITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPD 209
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T V+ C ++E+ Q+H +I G ++ ++N L+D+Y KCG + A LF
Sbjct: 210 ESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFE 269
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
++ DV+SW++LI GYA EAL +F M LG +PN VT++ +L AC+H+G ++
Sbjct: 270 GLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDI 329
Query: 521 G--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
G +H+Y I + GII + ++D+ A+ G + A
Sbjct: 330 GRWIHVY-IDKKLKGIITNTSLQTSLIDMYAKCGNIEAA 367
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 197/443 (44%), Gaps = 89/443 (20%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA------- 89
T+ L +C+ ++ Q G+++H IL D+ + +++MY + G +EDA
Sbjct: 80 TFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTS 139
Query: 90 ------------------------RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ FD++P ++VVSW AMI+G ++ + +A++L+
Sbjct: 140 SHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFN 199
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M++ V P + T +++ C+ G+V LGRQ+H+ + GS+L NALI +Y+K
Sbjct: 200 EMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCG 259
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A +F G+ KDV SW ++I ++ + + EAL F EML G PN+ S+
Sbjct: 260 EMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGE-TPNDVTMLSIL 318
Query: 246 SACSNFARI------------------------------------------LFNEIDSPD 263
AC++ I +F+ I +
Sbjct: 319 PACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKS 378
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC-------IGRLTLY 316
L+S NA+I G A H A+ A L S M+ + PD +T LL AC +GR ++
Sbjct: 379 LSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGR-KIF 437
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+ M + I + + ++ + + + A + + D V W S++ AC
Sbjct: 438 KSMTLDYRI-----EPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKAC 492
Query: 377 LQHNQAEELFRLFSRMLASQIKP 399
H EL L ++ L +I+P
Sbjct: 493 KIHKNL-ELGELIAQKLM-KIEP 513
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 193/418 (46%), Gaps = 39/418 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + Y EAL ++ +++ ST A ++S C+ +++LGR++H I
Sbjct: 179 NAMISGYAEIGRYKEALELFN-EMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWID 237
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ L N ++++Y KCG +E A F+ + ++V+SW +I G + +A+
Sbjct: 238 NHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALL 297
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG--SHLIAQNALIAM 180
++ +ML+ G P T SI+ AC+ LG++ +GR +H ++ K G ++ Q +LI M
Sbjct: 298 VFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDM 357
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K I A VF I K ++S +MI F+ G A + M G +P++
Sbjct: 358 YAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGI-EPDDIT 416
Query: 241 FGSVFSAC-----SNFARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEM 290
F + SAC S+ R +F + P L + +I + EA L + M
Sbjct: 417 FVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSM 476
Query: 291 RDRELLPDGLTVHSLLCAC-------IGRLTLYQGMQVH-----SYIIKMGFDSNVPVCN 338
+ PDG+ SLL AC +G L + M++ SY++ SN+ +
Sbjct: 477 T---MEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLL----SNIYATS 529
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ----HNQAEELFRLFSRM 392
A A+ L N + K G S+ +S++ L H Q +E++++ +
Sbjct: 530 ARWDDVARVRTLLNDKGLKKVPG--CSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEI 585
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/469 (33%), Positives = 254/469 (54%), Gaps = 38/469 (8%)
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
C QN +K + L P + ++I AC + LG+++HAH S
Sbjct: 43 CQQN-----RLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPG 97
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
++ N LI MY K ++DA+ +F I +KD+ SW +MI+ ++ +G +E
Sbjct: 98 IVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVG-RIEQ--------- 147
Query: 231 HGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
AR LF+E+ D SWNA+I+G S EA+ LF M
Sbjct: 148 ---------------------ARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMM 186
Query: 291 RDRELLP-DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
++ E + T+ S L A +L +G ++H Y+I+ G + + V A+L +Y KC
Sbjct: 187 QENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGS 246
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L A +F ++ + D VSW ++I C + + +E F LF ++ S ++P+ TF V+
Sbjct: 247 LNEARGIFDQMA-DKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLN 305
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
ACA +A+ +M ++H Y+T+ G F + L+ +Y KCG+ +AR++FN M PD+VS
Sbjct: 306 ACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVS 365
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+SLI+GYAQ G D AL+ F + G P+ +T VGVL+AC+H GLV+ GL + ++
Sbjct: 366 WTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVK 425
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++G++ T +H +CV+DLLAR+G EAE+ I+ M D +W SLL
Sbjct: 426 EKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLG 474
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 193/453 (42%), Gaps = 79/453 (17%)
Query: 4 DYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILL 63
+ + C+QN EA+ D+ + P Y+ LI+AC R L+LG++VH H
Sbjct: 37 EIIELFCQQNRLKEAV---DYLHRIP--QPSPRLYSTLIAACLRHRKLELGKRVHAHTKA 91
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
S P +V+ N +++MY KCGSL DA+M FD++PQ+++ SW MI+G + + A KL
Sbjct: 92 SNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKL 151
Query: 124 YIQMLQ------SGVMPGQFTFGSIIKAC-------SGLGSVC----------------- 153
+ +M + V+ G + G ++A S C
Sbjct: 152 FDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISS 211
Query: 154 --LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
G+++H ++I+S + AL+ +Y K + +AR +F +A KD+ SW +MI
Sbjct: 212 LRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHR 271
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
+ G + E F +++ G +PNE+ F V +AC++
Sbjct: 272 CFEDGRKKEGFSLFRDLMGSGV-RPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDP 330
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
AR +FN++ PDL SW +LI G A + + A+ F +
Sbjct: 331 FSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLL 390
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
PD +T +L AC + G++ HS K G ++ + A+
Sbjct: 391 RSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRF 450
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
A + + D W S++ C H E
Sbjct: 451 KEAENIIDNMPMKPDKFLWASLLGGCRIHGNIE 483
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 142/248 (57%), Gaps = 1/248 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S Q Y EAL + Q N + T + ++A +++ SL+ G+++H +++
Sbjct: 164 NAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLI 223
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S + D V+ +L++YGKCGSL +AR FD+M +++VSWT MI C ++ ++ +
Sbjct: 224 RSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFS 283
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ ++ SGV P ++TF ++ AC+ L + +G+++H ++ + + A +AL+ +Y+
Sbjct: 284 LFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYS 343
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K AR VF+ + R D+ SW S+I +++ G AL F +L G +P+E F
Sbjct: 344 KCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGT-KPDEITFV 402
Query: 243 SVFSACSN 250
V SAC++
Sbjct: 403 GVLSACTH 410
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 177/550 (32%), Positives = 260/550 (47%), Gaps = 111/550 (20%)
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK----------FDRIL 188
F ++ C L S R +H +I++ + QN LI +Y K FDR +
Sbjct: 27 FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDR-M 85
Query: 189 DARNVFSG----------------------IARKDVTSWGSMIAAFSKLGYELEALCHFN 226
RNVFS + KD SW SMIA F++ EAL F
Sbjct: 86 SERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFV 145
Query: 227 EMLHHGAYQPNEFIFGSVFSACSNF----------------------------------- 251
M H + N++ FGS SACS
Sbjct: 146 RM-HRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKC 204
Query: 252 -----ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
AR +F+ ++ ++ SWN LI + A EA+ F M + PD +T+ S++
Sbjct: 205 GLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVV 264
Query: 307 CACIGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVFKELG---- 361
AC +G+Q+H+ ++K F +++ + NA++ MYAKC + A VF +
Sbjct: 265 SACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNA 324
Query: 362 --------------------------KNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
K D VSWN++IA Q+ + EE LF +
Sbjct: 325 VSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRE 384
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF------DVFVMNGLMDIYIKC 449
+ P H TF +++ A A +A LE+ Q H ++ K G F D+FV N L+D+Y+KC
Sbjct: 385 SVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKC 444
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
GS+ ++F M D VSW+++I+GYAQ G G EAL+LF +M G P+ VT++G L
Sbjct: 445 GSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTL 504
Query: 510 TACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
ACSH GLVEEG + M E+G++P ++H +C+VDLL RAGC+ EA+D I M D
Sbjct: 505 CACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPD 564
Query: 570 IVVWKSLLAS 579
VVW SLL++
Sbjct: 565 AVVWSSLLSA 574
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 147/550 (26%), Positives = 243/550 (44%), Gaps = 113/550 (20%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S +A L+ C LRS + R VH ++ + +V +QN ++++YGKCG L+ AR FD+
Sbjct: 25 SPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDR 84
Query: 96 MPQRNVV-------------------------------SWTAMIAGCSQNYQENDAIKLY 124
M +RNV SW +MIAG +Q+ + +A+ +
Sbjct: 85 MSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWF 144
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
++M + + ++FGS + ACS L + LG Q+H + KS++ + + LI Y+K
Sbjct: 145 VRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKC 204
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ AR VF G+ K+V SW +I + + G +EAL F M G ++P+E SV
Sbjct: 205 GLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELG-FKPDEVTLASV 263
Query: 245 FSACS-----------------------------------------NFARILFNEIDSPD 263
SAC+ N AR +F+ + +
Sbjct: 264 VSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRN 323
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELL--------------------------- 296
S +++G A ++ A S+F+ ++ ++++
Sbjct: 324 AVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKR 383
Query: 297 ----PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF------DSNVPVCNAILTMYAK 346
P T +LL A L G Q HS+++K GF + ++ V N+++ MY K
Sbjct: 384 ESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMK 443
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
C + L VF+ + + D VSWN++I Q+ E LF +ML S KPDH+T
Sbjct: 444 CGSVEEGLRVFENMVEK-DHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIG 502
Query: 407 VMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM-EN 464
+ AC+ +E + +TK GL ++D+ + G L A+ L M +
Sbjct: 503 TLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQ 562
Query: 465 PDVVSWSSLI 474
PD V WSSL+
Sbjct: 563 PDAVVWSSLL 572
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 213/475 (44%), Gaps = 94/475 (19%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + + + EAL + + + + ++ +SACS L+ L+LG ++H I
Sbjct: 125 NSMIAGFAQHDRFEEALDWF-VRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLIS 183
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
SK DV + + +++ Y KCG + AR FD M ++NVVSW +I QN +A++
Sbjct: 184 KSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALE 243
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH-GSHLIAQNALIAMY 181
+ +M + G P + T S++ AC+ L + G Q+HA V+KS+ + LI NAL+ MY
Sbjct: 244 AFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMY 303
Query: 182 TK----------FDR---------------------ILDARNVFSGIARKDVTSWGSMIA 210
K FDR + AR++F+ I +KD+ SW ++IA
Sbjct: 304 AKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIA 363
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------L 255
+++ G EAL F ML + P + FG++ +A +N A +
Sbjct: 364 GYTQNGENEEALGLFR-MLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFR 422
Query: 256 FNEIDSPDL-------------------------------ASWNALIAGVASHSNANEAM 284
F + PD+ SWN +I G A + EA+
Sbjct: 423 FQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEAL 482
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN-VPVCN---AI 340
LF +M + PD +T+ LCAC + +G + Y M + +PV + +
Sbjct: 483 ELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRR---YFFSMTKEHGLLPVKDHYTCM 539
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRL 388
+ + + L A + + + K D+V W+S+++AC H AE++F +
Sbjct: 540 VDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEI 594
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 88/216 (40%), Gaps = 45/216 (20%)
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK-- 457
D F ++ C K+ S +H + +T +VF+ N L+D+Y KCG L ARK
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 458 -----------------------------LFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
LF+ M D SW+S+I G+AQ +EAL
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC------S 542
F RM N + L+ACS + ++ G + +G+I ++ S
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQI-------HGLISKSKYSLDVFMGS 195
Query: 543 CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++D ++ G V A + M + ++V W L+
Sbjct: 196 GLIDFYSKCGLVGCARRVFDGME-EKNVVSWNCLIT 230
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 173/584 (29%), Positives = 293/584 (50%), Gaps = 48/584 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
Y ++ C + +H IL D+ N +LN Y K G +DA FD+M
Sbjct: 51 AYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM 110
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+RN VS+ + +Q Y D + LY ++ + G F S +K L +
Sbjct: 111 PERNNVSYVTL----TQGYACQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICW 166
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
LH+ ++K + S+ ALI Y+ + AR+VF GI KD+ W +++ + + G
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENG 226
Query: 217 YELEALCHFNEMLHHGAYQPNEFIF--------------------GSVFSACSNF----- 251
++L + M G + PN + F G + C
Sbjct: 227 CFEDSLQLLSRMGMDG-FMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVG 285
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A +FNE+ D+ W+ +IA + N+A+ +F MR+ ++
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVV 345
Query: 297 PDGLTVHSLLCAC-IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ T+ S+L C IG+ + G Q+H ++K+GFD +V V NA++ +YAKC + A+
Sbjct: 346 PNEFTLSSILNGCAIGKCSGL-GEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVK 404
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F EL + + VSWN++I + + +F L +Q+ +TF+ +GACA +A
Sbjct: 405 LFAEL-SSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLA 463
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
S+E+ Q+H KT A V V N L+D+Y KCG + A+ +FN ME DV SW++LI
Sbjct: 464 SMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALIS 523
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
GY+ G G +AL++F M+ PN +T +GVL+ CS+ GL+++G + M ++GI
Sbjct: 524 GYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIE 583
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P EH +C+V L R+G + +A + I + + +++W+++L++
Sbjct: 584 PCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSA 627
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 212/485 (43%), Gaps = 44/485 (9%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+ P + + SL ++ +H I+ + + ++N Y CGS++ AR
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARS 202
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
F+ + +++V W +++ +N D+++L +M G MP +TF + +KA GLG+
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGA 262
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ +H ++K+ + L+ +YT+ + DA VF+ + + DV W MIA
Sbjct: 263 FHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------------- 249
F + G+ +A+ F M G PNEF S+ + C+
Sbjct: 323 FCQNGFCNKAVDIFIRM-REGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL 381
Query: 250 ------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
+ A LF E+ S ++ SWN +I G + +A+++F E
Sbjct: 382 DVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREAL 441
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
++ +T S L AC ++ G+QVH IK V V N+++ MYAKC +
Sbjct: 442 RNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIK 501
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A VF E+ + D SWN++I+ H + R+F M S KP+ +TF V+ C
Sbjct: 502 VAQTVFNEM-ETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGC 560
Query: 412 AKMASLEMVTQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVS 469
+ ++ I G+ + ++ ++ + G L A L + P V+
Sbjct: 561 SNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMI 620
Query: 470 WSSLI 474
W +++
Sbjct: 621 WRAML 625
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 12/202 (5%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
N++ EAL + + T++ + AC+SL S++LG +VH + + V +
Sbjct: 435 NMFREAL--------RNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAV 486
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
N +++MY KCG ++ A+ F++M +V SW A+I+G S + A++++ M S
Sbjct: 487 SNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDC 546
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH--LIAQNALIAMYTKFDRILDA 190
P TF ++ CS G + G+ +I +HG L ++ ++ + ++ A
Sbjct: 547 KPNGLTFLGVLSGCSNAGLIDQGQDCFESMI-CDHGIEPCLEHYTCMVRLFGRSGQLDKA 605
Query: 191 RNVFSGIA-RKDVTSWGSMIAA 211
N+ GI V W +M++A
Sbjct: 606 MNLIEGIPYEPSVMIWRAMLSA 627
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 28/141 (19%)
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
SV W+ + CL + + ML I+ ND + A A +HC
Sbjct: 36 SVQWSDSVVPCLDSHA-------YGTMLRRCIRK-----NDSVSAKA----------IHC 73
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
I K G D+F N L++ Y+K G A LF+ M + VS+ +L GYA C D
Sbjct: 74 DILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYA---CQD- 129
Query: 486 ALKLFTRMRSLG--VSPNLVT 504
+ L++R+ G ++P++ T
Sbjct: 130 PVGLYSRLHREGHELNPHVFT 150
>gi|359485428|ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g58590-like [Vitis vinifera]
Length = 921
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 176/548 (32%), Positives = 280/548 (51%), Gaps = 50/548 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++ G++S +S + L+LG +VHD ++ + +V + N ++NMY KC + A F+
Sbjct: 256 SFMGVLSGFASEQDLELGEQVHDLLIKNGFDCEVSVLNSLINMYVKCSCICLAEKMFELG 315
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+VVSW MI +++ + + ++L+++M GV+P + TF S+I +C+ L + G
Sbjct: 316 CVRDVVSWNTMIGALAKSERPSKVLELFLKMSLDGVLPNETTFVSVINSCTNLQILVFGE 375
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+HA VI+++ S++ +AL+ Y K D + A F I K+V W ++I +S
Sbjct: 376 YIHAKVIRNKIESNVFVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALILGYSNKC 435
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVAS 276
+ +L ML G Y PNEF F + + F +L + LI +
Sbjct: 436 FSSVSL--LKRMLQLG-YCPNEFSFSAALKSSLVF-----------ELQQLHCLIMRMGY 481
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD--SNV 334
N + +L + ++ D L FD SN
Sbjct: 482 QQNEYVSSALITSYAKNGIISDALI----------------------------FDAASNK 513
Query: 335 PV----CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
P+ NAI +Y K +F L + D VSWN +IAAC ++ +E+F LF
Sbjct: 514 PLLVGPSNAIAGVYNKIGQYHRTQDLFSLL-EEPDIVSWNILIAACARNGDYKEVFELFK 572
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF-DVFVMNGLMDIYIKC 449
M +QI PD+ T ++ C K+ +L + + +H +I KT F D FV N L+D+Y KC
Sbjct: 573 HMQMAQIYPDNYTVVSLLSVCTKLCNLALGSSIHGFIIKTDFKFCDTFVFNVLIDMYGKC 632
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
G + S+ K+FN + ++++W++LI G +EALKLF M SLG P+ V LV V
Sbjct: 633 GCIESSLKIFNKIIERNIITWTALISALGVNGYANEALKLFREMESLGFKPDGVALVAVF 692
Query: 510 TACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
+AC H GLV+EG+ L+ M+ GI P +H CVVDLLAR G + EAE I+ M +
Sbjct: 693 SACRHGGLVKEGMELFWQMKKSCGIEPNIDHYHCVVDLLARCGHLQEAEQVISNMPFPPN 752
Query: 570 IVVWKSLL 577
++W+S L
Sbjct: 753 ALIWRSFL 760
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 149/611 (24%), Positives = 275/611 (45%), Gaps = 86/611 (14%)
Query: 44 ACSSLRSLQLGRKVH--DHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
AC +L+ + +H + S + L N+++++Y G L AR F +M QRNV
Sbjct: 60 ACKKAPTLKETKPLHALTVTMASNSTQPIFLYNNLISLYVLQGELSTARKVFGEMTQRNV 119
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
VS+ +I G S+N +A L+ +M + G P Q TF ++ +C+ L + G QL A
Sbjct: 120 VSYNTIIGGYSRNGSVEEAWNLFSEMRRYGFEPTQHTFAGLL-SCASL-KLSQGFQLQAQ 177
Query: 162 VIKSE-HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
++KS + A AL++++ + I + F + +K++ +W ++I+ F G+ E
Sbjct: 178 MVKSGLFHADPYAGTALLSLFGRNGCIDEVVCAFEEMPQKNLVTWNTVISLFGNYGFSEE 237
Query: 221 ALCHFNEMLHHGA-----------------------YQPNEFIFGSVFS----------- 246
++ F E++ GA Q ++ + + F
Sbjct: 238 SMFLFRELMRTGAGLSECSFMGVLSGFASEQDLELGEQVHDLLIKNGFDCEVSVLNSLIN 297
Query: 247 -----ACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
+C A +F D+ SWN +I +A ++ + LF +M +LP+ T
Sbjct: 298 MYVKCSCICLAEKMFELGCVRDVVSWNTMIGALAKSERPSKVLELFLKMSLDGVLPNETT 357
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
S++ +C L G +H+ +I+ +SNV V +A++ YAKC L +A F E+
Sbjct: 358 FVSVINSCTNLQILVFGEYIHAKVIRNKIESNVFVGSALVDFYAKCDNLESAHCCFDEID 417
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
+ + V WN++I N+ L RML P+ +F+ A K + + +
Sbjct: 418 EK-NVVCWNALILG--YSNKCFSSVSLLKRMLQLGYCPNEFSFS----AALKSSLVFELQ 470
Query: 422 QLHCYITKTG------------------------LAFD--------VFVMNGLMDIYIKC 449
QLHC I + G L FD V N + +Y K
Sbjct: 471 QLHCLIMRMGYQQNEYVSSALITSYAKNGIISDALIFDAASNKPLLVGPSNAIAGVYNKI 530
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
G + LF+ +E PD+VSW+ LI A+ G E +LF M+ + P+ T+V +L
Sbjct: 531 GQYHRTQDLFSLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQIYPDNYTVVSLL 590
Query: 510 TACSHVGLVEEGLHLYR-IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
+ C+ + + G ++ I++ ++ T + ++D+ + GC+ + N++ +
Sbjct: 591 SVCTKLCNLALGSSIHGFIIKTDFKFCDTFVF-NVLIDMYGKCGCIESSLKIFNKII-ER 648
Query: 569 DIVVWKSLLAS 579
+I+ W +L+++
Sbjct: 649 NIITWTALISA 659
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 194/449 (43%), Gaps = 85/449 (18%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T+ +I++C++L+ L G +H ++ +K + +V + + +++ Y KC +LE A FD+
Sbjct: 356 TTFVSVINSCTNLQILVFGEYIHAKVIRNKIESNVFVGSALVDFYAKCDNLESAHCCFDE 415
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ ++NVV W A+I G S + ++ L +MLQ G P +F+F + +K+ V
Sbjct: 416 IDEKNVVCWNALILGYSN--KCFSSVSLLKRMLQLGYCPNEFSFSAALKS----SLVFEL 469
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA------------------------- 190
+QLH +++ + + +ALI Y K I DA
Sbjct: 470 QQLHCLIMRMGYQQNEYVSSALITSYAKNGIISDALIFDAASNKPLLVGPSNAIAGVYNK 529
Query: 191 -------RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
+++FS + D+ SW +IAA ++ G E F M Y P+ + S
Sbjct: 530 IGQYHRTQDLFSLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQIY-PDNYTVVS 588
Query: 244 VFSACSNFARI-----------------------------------------LFNEIDSP 262
+ S C+ + +FN+I
Sbjct: 589 LLSVCTKLCNLALGSSIHGFIIKTDFKFCDTFVFNVLIDMYGKCGCIESSLKIFNKIIER 648
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
++ +W ALI+ + + ANEA+ LF EM PDG+ + ++ AC + +GM++
Sbjct: 649 NIITWTALISALGVNGYANEALKLFREMESLGFKPDGVALVAVFSACRHGGLVKEGMELF 708
Query: 323 SYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
+ K G + N+ + ++ + A+C L A V + +++ W S + C +
Sbjct: 709 WQMKKSCGIEPNIDHYHCVVDLLARCGHLQEAEQVISNMPFPPNALIWRSFLEGCKRWKT 768
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGA 410
AE +F LA ++ P+H F G
Sbjct: 769 AENQESIF---LAGRL-PEHTNFGGPCGP 793
>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 800
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 176/588 (29%), Positives = 293/588 (49%), Gaps = 44/588 (7%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
I I ++ ++ AC+ +L +G +VH I+ D V++ +L MYG G L +A
Sbjct: 94 QIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNA 153
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
+ FD M R++VSW+++I+ N + ++ ++++ ++ V T SI AC L
Sbjct: 154 KKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGEL 213
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G + L + +H +I+ + +AL+ MY++ D A +FS + + + SW +MI
Sbjct: 214 GFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMI 273
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------------- 254
+ +++ + +AL F EML PN +V S+C+ F +
Sbjct: 274 SCYNRSRWFKQALQVFVEMLEFKV-APNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHID 332
Query: 255 -------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
+ + I ++ SWN LI+ AS EA+ +F +
Sbjct: 333 LDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQ 392
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M+ + +PD ++ S + AC L+ G Q+H Y IK V N+++ MY+KC
Sbjct: 393 MQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHILDEF-VQNSLIDMYSKCGH 451
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ A L+F + ++ V+WNS+I Q + E RLF +M + + + +TF +
Sbjct: 452 VDLAYLIFDRI-QSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQ 510
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
AC+ M LE LH + G+ D+F+ L+D+Y KCG L A ++F+ M VVS
Sbjct: 511 ACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVS 570
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
WS++I G G D A+ LF M + PN +T + +L+ACSH G VEEG + M+
Sbjct: 571 WSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDITFMNILSACSHSGYVEEGKFYFNSMK 630
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
N + + P EH +C+VDLL+RAG + EA IN M A+ +W +LL
Sbjct: 631 N-FEVEPNLEHFACMVDLLSRAGDLDEAYRIINSMPFPAEASIWGALL 677
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 150/301 (49%), Gaps = 3/301 (0%)
Query: 229 LHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
LHH + I C ++++F +PD W LI + EA+SL++
Sbjct: 29 LHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFMWAVLIKCHVWSNFCGEAISLYN 88
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+M +++ S+L AC G L G +VH IIK G D + V ++L MY
Sbjct: 89 KMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVETSLLGMYGDLG 148
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
L NA VF + D VSW+SII+ + + ++ E +F +++ ++ D +T +
Sbjct: 149 CLSNAKKVFDNM-TTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIA 207
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
GAC ++ L + +H I + + + + L+ +Y +C SA ++F+ M N +
Sbjct: 208 GACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMFNRSIA 267
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYR 526
SW+++I Y + +AL++F M V+PN VT++ VL++C+ L+ EG +H Y
Sbjct: 268 SWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHCYA 327
Query: 527 I 527
+
Sbjct: 328 V 328
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 220/480 (45%), Gaps = 56/480 (11%)
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
+ ++C+ L + L LH+H++ + A LI Y++ + ++ VF D
Sbjct: 7 LFRSCTSLRPLTL---LHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPD 63
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------- 251
W +I + EA+ +N+M++ ++FIF SV AC+ F
Sbjct: 64 SFMWAVLIKCHVWSNFCGEAISLYNKMIYK-QIPISDFIFSSVLRACAGFGNLDVGEEVH 122
Query: 252 ------------------------------ARILFNEIDSPDLASWNALIAGVASHSNAN 281
A+ +F+ + + DL SW+++I+ + ++
Sbjct: 123 GRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESS 182
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCAC--IGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
E + +F + +++ D +T+ S+ AC +G L L + VH II+ ++ P+ +A
Sbjct: 183 EGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAK--SVHGCIIRQRIETRGPLNDA 240
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
++ MY++C +A +F + N SW ++I+ + ++ ++F ML ++ P
Sbjct: 241 LVLMYSRCDDFSSAERIFSNMF-NRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAP 299
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
+ +T V+ +CA L +HCY K D + L++ Y + G L K+
Sbjct: 300 NAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVL 359
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ + +++SW+ LI YA G EAL +F +M+ G P+ +L ++AC++VGL+
Sbjct: 360 HTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLW 419
Query: 520 EG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
G +H Y I + I + ++D+ ++ G V A +++ + +V W S++
Sbjct: 420 LGHQIHGYAIKRH----ILDEFVQNSLIDMYSKCGHVDLAYLIFDRIQSKS-VVAWNSMI 474
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 149/297 (50%), Gaps = 12/297 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S Q L+ EAL + Q I + + ISAC+++ L LG ++H + +
Sbjct: 371 NMLISVYASQGLFKEALGIFVQMQRQGQIP-DSFSLSSSISACANVGLLWLGHQIHGYAI 429
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D +QN +++MY KCG ++ A + FD++ ++VV+W +MI G SQ +AI+
Sbjct: 430 -KRHILDEFVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIR 488
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ QM + + + TF + I+ACS +G + G+ LH +I L ALI MY
Sbjct: 489 LFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALIDMYA 548
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + A VF ++ + V SW +MI G A+ F EM+ +PN+ F
Sbjct: 549 KCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQR-EMKPNDITFM 607
Query: 243 SVFSACSNF-----ARILFNEIDS----PDLASWNALIAGVASHSNANEAMSLFSEM 290
++ SACS+ + FN + + P+L + ++ ++ + +EA + + M
Sbjct: 608 NILSACSHSGYVEEGKFYFNSMKNFEVEPNLEHFACMVDLLSRAGDLDEAYRIINSM 664
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 174/617 (28%), Positives = 300/617 (48%), Gaps = 43/617 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S L + + EAL + Q + + L A S L + + +H +++
Sbjct: 197 NAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVV 256
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+C VV N +++MY KCG ++ A FD+M ++ +SW M+AG + + ++
Sbjct: 257 -RRCVFGVV-SNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQ 314
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L +M + + + + + + A + + G+++H + ++ S ++ +++MY
Sbjct: 315 LLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYA 374
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + A+ F + +D+ W + ++A + GY EAL F EM H G +P++ I
Sbjct: 375 KCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEG-LKPDKTILS 433
Query: 243 SVFSACSN----------------------------------------FARILFNEIDSP 262
S+ SAC+ +A LFN +
Sbjct: 434 SLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYK 493
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ +WN LI G + A+ +F ++ + PD T+ SLL AC LY G+ H
Sbjct: 494 DVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFH 553
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
IIK G +S + V A++ MYAKC LC A +F D VSWN +IA L + A
Sbjct: 554 GNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCA 613
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
E F++M ++P+ +TF ++ A + ++ L H I + G + N L
Sbjct: 614 NEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSL 673
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y K G L + K F+ MEN +SW++++ GYA G G+ AL LF+ M+ V +
Sbjct: 674 IDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDS 733
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
V+ + VL+AC H GL++EG ++++ M ++ + P+ EH +C+VDLL AG E I+
Sbjct: 734 VSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLID 793
Query: 563 QMACDADIVVWKSLLAS 579
+M + D VW +LL +
Sbjct: 794 KMPTEPDAQVWGALLGA 810
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 166/619 (26%), Positives = 302/619 (48%), Gaps = 51/619 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N + + + +L+ EA+ +Y Q + + + P T+ ++ AC+ G +H
Sbjct: 96 NSLIRAYSRLHLFQEAIKSY---QTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIHQD 152
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
I + + DV + +++MY K G L++AR FDKMP ++V SW AMI+G SQ+ +A
Sbjct: 153 IASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEA 212
Query: 121 IKLYIQM-LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
++++ +M ++ GV P + ++ A S L V + +H +V++ + N+LI
Sbjct: 213 LEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVR--RCVFGVVSNSLID 270
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM----------- 228
MY+K + A +F + KD SW +M+A + G E L +EM
Sbjct: 271 MYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKIS 330
Query: 229 -------------------LHHGAYQ---PNEFIFG----SVFSACSNF--ARILFNEID 260
+H+ A Q ++ + S+++ C A+ F ++
Sbjct: 331 VVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLE 390
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
DL W+A ++ + EA+S+F EM+ L PD + SL+ AC + G
Sbjct: 391 GRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKM 450
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H Y+IK S++ V +++MY +C A+ +F + D V+WN++I +
Sbjct: 451 MHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRM-HYKDVVAWNTLINGFTKCG 509
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
+F R+ S ++PD T ++ ACA + L + H I K G+ ++ V
Sbjct: 510 DPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKV 569
Query: 441 GLMDIYIKCGSLGSARKLFNFMEN-PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
L+D+Y KCGSL +A LF+ ++ D VSW+ +I GY GC +EA+ F +M+ V
Sbjct: 570 ALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVR 629
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
PNLVT V +L A S++ ++ E + + + G I + + ++D+ A++G + +E
Sbjct: 630 PNLVTFVTILPAVSYLSILREAMAFHACI-IRMGFISSTLIGNSLIDMYAKSGQLSYSEK 688
Query: 560 FINQMACDADIVVWKSLLA 578
++M + + W ++L+
Sbjct: 689 CFHEME-NKGTISWNAMLS 706
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 144/520 (27%), Positives = 248/520 (47%), Gaps = 46/520 (8%)
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
+++ W ++I S+ + +AIK Y M G+ P ++TF ++KAC+G G +H
Sbjct: 91 SLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIH 150
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
+ E + L+ MY K + +AR VF + KDV SW +MI+ S+
Sbjct: 151 QDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPC 210
Query: 220 EALCHFNEMLHHGAYQPNEF-----------------------------IFGSV------ 244
EAL F M +P+ +FG V
Sbjct: 211 EALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFGVVSNSLID 270
Query: 245 -FSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
+S C A +F+++ D SW ++AG H E + L EM+ + + + ++
Sbjct: 271 MYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKIS 330
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
V + + A L +G +VH+Y +++G S++ V I++MYAKC L A F L
Sbjct: 331 VVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSL- 389
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
+ D V W++ ++A +Q E +F M +KPD + ++ ACA+++S +
Sbjct: 390 EGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGK 449
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
+HCY+ K + D+ V L+ +Y +C S A LFN M DVV+W++LI G+ +
Sbjct: 450 MMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTK-- 507
Query: 482 CGDE--ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTR 538
CGD AL++F R++ GV P+ T+V +L+AC+ + + G+ + I++N GI
Sbjct: 508 CGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKN--GIESEM 565
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++D+ A+ G + AE+ + D V W ++A
Sbjct: 566 HVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIA 605
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 205/453 (45%), Gaps = 46/453 (10%)
Query: 5 YVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLS 64
++S+L + EAL + Q+ ++ + + L+SAC+ + S +LG+ +H +++ +
Sbjct: 400 FLSALVQAGYPGEALSIFQEMQHE-GLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKA 458
Query: 65 KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
D+ + +++MY +C S A F++M ++VV+W +I G ++ A++++
Sbjct: 459 DMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMF 518
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
+++ SGV P T S++ AC+ L + LG H ++IK+ S + + ALI MY K
Sbjct: 519 LRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKC 578
Query: 185 DRILDARNVFS-GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
+ A N+F KD SW MIA + G EA+ FN+M + +PN F +
Sbjct: 579 GSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQM-KLESVRPNLVTFVT 637
Query: 244 VFSACS----------------------------------------NFARILFNEIDSPD 263
+ A S +++ F+E+++
Sbjct: 638 ILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKG 697
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV-H 322
SWNA+++G A H A++LFS M++ + D ++ S+L AC + +G +
Sbjct: 698 TISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQ 757
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
S K + ++ ++ + + L + ++ D+ W +++ AC H+
Sbjct: 758 SMTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHSNV 817
Query: 383 E--ELFRLFSRMLASQIKPDHITFNDVMGACAK 413
+ E+ L + +I +D+ C +
Sbjct: 818 KLGEIALHHLLKLEPRNAVHYIVLSDIYAQCGR 850
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/545 (30%), Positives = 273/545 (50%), Gaps = 45/545 (8%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM---PG 135
+Y + SL A F++ P + V W A++ + + + L+ QM + P
Sbjct: 45 LYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPD 104
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
+T +K+CSGL + LG+ +H + K + + + +ALI +Y+K ++ DA VF+
Sbjct: 105 NYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFT 164
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI- 254
++DV W S+I + + G AL F+ M+ P+ S SAC+ +
Sbjct: 165 EYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFN 224
Query: 255 ---------------------------------------LFNEIDSPDLASWNALIAGVA 275
LF E+ D+ SW++++A A
Sbjct: 225 LGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYA 284
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
+ A++LF+EM D+ + + +TV S L AC L +G +H + GF+ ++
Sbjct: 285 DNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDIT 344
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
V A++ MY KC NA+ +F + K D VSW + + + A + +F ML+
Sbjct: 345 VSTALMDMYMKCFSPKNAIDLFNRMPKK-DVVSWAVLFSGYAEIGMAHKSLGVFCNMLSY 403
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA 455
+PD I ++ A +++ ++ LH +++K+G + F+ L+++Y KC S+ +A
Sbjct: 404 GTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNA 463
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNLVTLVGVLTACSH 514
K+F M DVV+WSS+I Y G G+EALKLF +M + V PN VT V +L+ACSH
Sbjct: 464 NKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSH 523
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
GL+EEG+ ++ +M NEY ++P EH +VDLL R G + +A D IN+M A VW
Sbjct: 524 AGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWG 583
Query: 575 SLLAS 579
+LL +
Sbjct: 584 ALLGA 588
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/489 (28%), Positives = 230/489 (47%), Gaps = 52/489 (10%)
Query: 34 RPSTYAGLIS--ACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP Y I+ +CS L+ L+LG+ +H + K D+ + + ++ +Y KCG + DA
Sbjct: 102 RPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVK 161
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ-SGVMPGQFTFGSIIKACSGLG 150
F + P+++VV WT++I G QN A+ + +M+ V P T S AC+ L
Sbjct: 162 VFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLS 221
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
LGR +H V + + L N+++ +Y K I A N+F + KD+ SW SM+A
Sbjct: 222 DFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVA 281
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------- 254
++ G E AL FNEM+ + N S AC++ + +
Sbjct: 282 CYADNGAETNALNLFNEMIDK-RIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFE 340
Query: 255 ------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
LFN + D+ SW L +G A A++++ +F M
Sbjct: 341 LDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNM 400
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
PD + + +L A + Q + +H+++ K GFD+N + +++ +YAKCS +
Sbjct: 401 LSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSI 460
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA-SQIKPDHITFNDVMG 409
NA VFK + + D V+W+SIIAA H Q EE +LF +M S +KP+ +TF ++
Sbjct: 461 DNANKVFKGM-RRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILS 519
Query: 410 ACAKMASLEM-VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME---NP 465
AC+ +E + H + + L + ++D+ + G L A + N M P
Sbjct: 520 ACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGP 579
Query: 466 DVVSWSSLI 474
V W +L+
Sbjct: 580 HV--WGALL 586
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 219/469 (46%), Gaps = 52/469 (11%)
Query: 157 QLHAHVIKS--EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
QLH+ +K H S ++ + L +Y ++ + A +F K V W +++ ++
Sbjct: 22 QLHSQCLKVGLAHDSFVVTK--LNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFL 79
Query: 215 LGYELEALCHFNEM--------------------------------LHHGAYQP----NE 238
G +E L F++M + HG + N+
Sbjct: 80 EGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDND 139
Query: 239 FIFGS----VFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
GS ++S C N A +F E D+ W ++I G + + A++ FS M
Sbjct: 140 MFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVV 199
Query: 293 RELL-PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
E + PD +T+ S AC G VH ++ + GFD+ + + N+IL +Y K +
Sbjct: 200 LEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIR 259
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAE-ELFRLFSRMLASQIKPDHITFNDVMGA 410
+A +F+E+ D +SW+S++A C N AE LF+ M+ +I+ + +T + A
Sbjct: 260 SAANLFREM-PYKDIISWSSMVA-CYADNGAETNALNLFNEMIDKRIELNRVTVISALRA 317
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
CA ++LE +H G D+ V LMD+Y+KC S +A LFN M DVVSW
Sbjct: 318 CASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSW 377
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
+ L GYA+ G ++L +F M S G P+ + LV +L A S +G+V++ L L+ + +
Sbjct: 378 AVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFV-S 436
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ G + +++L A+ + A M D+V W S++A+
Sbjct: 437 KSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMR-RKDVVTWSSIIAA 484
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 177/386 (45%), Gaps = 41/386 (10%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P T SAC+ L LGR VH + + L N ILN+YGK GS+ A F
Sbjct: 207 PVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFR 266
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+MP ++++SW++M+A + N E +A+ L+ +M+ + + T S ++AC+ ++
Sbjct: 267 EMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEE 326
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+ +H + + AL+ MY K +A ++F+ + +KDV SW + + +++
Sbjct: 327 GKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAE 386
Query: 215 LGYELEALCHFNEMLHHG----------------------------------AYQPNEFI 240
+G ++L F ML +G + NEFI
Sbjct: 387 IGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFI 446
Query: 241 FGSV---FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR-E 294
S+ ++ CS+ A +F + D+ +W+++IA H EA+ LF +M + +
Sbjct: 447 GASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSD 506
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ P+ +T S+L AC + +G+++ H + + N ++ + + L A
Sbjct: 507 VKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKA 566
Query: 354 LLVFKELGKNADSVSWNSIIAACLQH 379
L + E+ A W +++ AC H
Sbjct: 567 LDMINEMPMQAGPHVWGALLGACRIH 592
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 143/288 (49%), Gaps = 18/288 (6%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
NL+NE + + I + T + AC+S +L+ G+ +H + + D+ +
Sbjct: 294 NLFNEMI--------DKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITV 345
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
+++MY KC S ++A F++MP+++VVSW + +G ++ + ++ ++ ML G
Sbjct: 346 STALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGT 405
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
P I+ A S LG V LHA V KS ++ +LI +Y K I +A
Sbjct: 406 RPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANK 465
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA 252
VF G+ RKDV +W S+IAA+ G EAL F +M +H +PN+ F S+ SACS+
Sbjct: 466 VFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAG 525
Query: 253 ---------RILFNEID-SPDLASWNALIAGVASHSNANEAMSLFSEM 290
++ NE P+ + ++ + ++A+ + +EM
Sbjct: 526 LIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMINEM 573
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
C+K++ + QLH K GLA D FV+ L +Y + SL A KLF V W
Sbjct: 15 CSKIS----IPQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLW 70
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVS---PNLVTLVGVLTACSHVGLVEEGLHLYRI 527
++L+ Y G E L LF +M + ++ P+ T+ L +CS + +E G ++
Sbjct: 71 NALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGF 130
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++ + I S +++L ++ G +++A + D+V+W S++
Sbjct: 131 LKKK-KIDNDMFVGSALIELYSKCGQMNDAVKVFTEYP-KQDVVLWTSIIT 179
>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 803
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 176/563 (31%), Positives = 279/563 (49%), Gaps = 49/563 (8%)
Query: 57 VHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQ 116
+ D ++K D L L + G +EDA FD+M + + W MI G +
Sbjct: 48 LRDRYKVTKQLNDPAL-TRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGL 106
Query: 117 ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA 176
+A++LY +M+ SGV FT+ +IK+ +G+ S+ G+++HA VIK S + N+
Sbjct: 107 YFEALQLYCRMVFSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNS 166
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
LI++Y K DA VF + +D+ SW SMI+ + L +L F EML G ++P
Sbjct: 167 LISLYMKLGCSWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFG-FKP 225
Query: 237 NEFIFGSVFSACS-----------------------------------------NFARIL 255
+ F S ACS ++A +
Sbjct: 226 DRFSTMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERI 285
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE-LLPDGLTVHSLLCACIGRLT 314
F I ++ +WN LI A +S +A F +M ++ L PD +T+ +LL AC
Sbjct: 286 FKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPAC----A 341
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
+ +G +H Y ++ GF ++ + A++ MY + L +A ++F + + + +SWNSIIA
Sbjct: 342 ILEGRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEK-NLISWNSIIA 400
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
A +Q+ + LF ++ S + PD T ++ A A+ SL Q+H YI K+
Sbjct: 401 AYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGS 460
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
+ ++N L+ +Y CG L ARK FN + DVVSW+S+I+ YA G G ++ LF+ M
Sbjct: 461 NTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMI 520
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCV 554
+ V PN T +L ACS G+V+EG + M+ EYGI P EH ++DL+ R G
Sbjct: 521 ASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNF 580
Query: 555 HEAEDFINQMACDADIVVWKSLL 577
A+ FI +M +W SLL
Sbjct: 581 SSAKRFIREMPFLPTARIWGSLL 603
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/500 (26%), Positives = 240/500 (48%), Gaps = 41/500 (8%)
Query: 14 LYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQ 73
LY EAL Y + ++ TY +I + + + SL+ G+K+H ++ + DV +
Sbjct: 106 LYFEALQLY-CRMVFSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVC 164
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N ++++Y K G DA F++MP+R++VSW +MI+G ++ L+ +ML+ G
Sbjct: 165 NSLISLYMKLGCSWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFK 224
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDARN 192
P +F+ S + ACS + S +G++LH H ++S ++ +++ MY+K+ + A
Sbjct: 225 PDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAER 284
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--- 249
+F I ++++ +W +I +++ +A F +M QP+ ++ AC+
Sbjct: 285 IFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILE 344
Query: 250 ---------------------------------NFARILFNEIDSPDLASWNALIAGVAS 276
A ++F+ I +L SWN++IA
Sbjct: 345 GRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQ 404
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
+ A+ LF ++ D LLPD T+ S+L A L+L +G Q+H+YI+K + SN +
Sbjct: 405 NGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTII 464
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
N+++ MYA C L +A F + D VSWNSII A H LFS M+AS+
Sbjct: 465 LNSLVHMYAMCGDLEDARKCFNHVLLK-DVVSWNSIIMAYAVHGFGRISVCLFSEMIASK 523
Query: 397 IKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA 455
+ P+ TF ++ AC+ + E + G+ + ++D+ + G+ SA
Sbjct: 524 VDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSA 583
Query: 456 RKLFNFMEN-PDVVSWSSLI 474
++ M P W SL+
Sbjct: 584 KRFIREMPFLPTARIWGSLL 603
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 174/329 (52%), Gaps = 13/329 (3%)
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
LF+E++ D WN +I G S EA+ L+ M + D T ++ + G +
Sbjct: 82 LFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTYPFVIKSVTGISS 141
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
L +G ++H+ +IK+ F S+V VCN+++++Y K +A VF+E+ + D VSWNS+I+
Sbjct: 142 LEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPER-DIVSWNSMIS 200
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
L LF ML KPD + +GAC+ + S M +LHC+ ++ +
Sbjct: 201 GYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIET 260
Query: 435 -DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
DV VM ++D+Y K G + A ++F + ++V+W+ LI YA+ +A F +M
Sbjct: 261 GDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKM 320
Query: 494 RSL-GVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLAR 550
G+ P+++TL+ +L AC+ + EG +H Y + G +P + ++D+
Sbjct: 321 SEQNGLQPDVITLINLLPACA----ILEGRTIHGYAMRR---GFLPHIVLDTALIDMYGE 373
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
G + AE +++A + +++ W S++A+
Sbjct: 374 WGQLKSAEVIFDRIA-EKNLISWNSIIAA 401
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 176/593 (29%), Positives = 301/593 (50%), Gaps = 53/593 (8%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKC---QPDVVLQNHILNMYGKCGSLED 88
R++ + + ++ C + G ++H L KC + +V + +++MY KCG +ED
Sbjct: 96 RVQGAAVSRVLKVCGLIPDRVSGEQLH--CLCVKCGFDRAEVGVGTALVDMYMKCGGVED 153
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
R+ F+ MP+RNVV+WT+++ G Q +D + L+ +M GV P FTF S++ A +
Sbjct: 154 GRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVAS 213
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
G+V LGR++HA +K S + N+LI MY+K + +A+ VF + +D+ SW ++
Sbjct: 214 QGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTL 273
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILF------------ 256
+A ++LEAL F++ A + ++ + +V C+N ++
Sbjct: 274 MAGLLLNEHQLEALQLFHDSRASMA-KLSQSTYSTVIKLCANLKQLALARQLHSCVLKHG 332
Query: 257 ------------------NEID-----------SPDLASWNALIAGVASHSNANEAMSLF 287
E+D S ++ SW A+I G +++ A +LF
Sbjct: 333 FHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALF 392
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
S MR+ + P+ T ++L A I L Q+H+ IIK + V A+L Y+K
Sbjct: 393 SRMREDNVKPNEFTYSTVLTASIPILL----PQIHAQIIKTNYQHAPSVGTALLASYSKL 448
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
AL +FK + + D V+W+++++ Q + +F +M +KP+ T +
Sbjct: 449 GNTEEALSIFKMI-DHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSA 507
Query: 408 MGACA-KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
+ ACA A ++ Q H K + V + L+ +Y + GS+ SAR +F + D
Sbjct: 508 IDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRD 567
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
+VSW+S+I GYAQ G EAL F +M ++G+ + T + V+ C+H GLV+EG +
Sbjct: 568 LVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFD 627
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M ++ I PT EH SC+VDL +RAG + E + I M A +VW++LL +
Sbjct: 628 SMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGA 680
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 136/509 (26%), Positives = 238/509 (46%), Gaps = 68/509 (13%)
Query: 19 LVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
++A F + P T+ ++SA +S ++ LGR+VH + C+ V + N ++N
Sbjct: 185 VMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLIN 244
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MY KCG +E+A+ F +M R++VSW ++AG N + +A++L+ S Q T
Sbjct: 245 MYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQST 304
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ--NALIAMYTKFDRILDARNVFSG 196
+ ++IK C+ L + L RQLH+ V+K HG H A++ Y+K + DA N+F
Sbjct: 305 YSTVIKLCANLKQLALARQLHSCVLK--HGFHSDGNVMTAIMDAYSKCGELDDAFNIFLL 362
Query: 197 I-ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC------- 248
+ ++V SW +MI + A F+ M +PNEF + +V +A
Sbjct: 363 MPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNV-KPNEFTYSTVLTASIPILLPQ 421
Query: 249 ---------------------SNFARI--------LFNEIDSPDLASWNALIAGVASHSN 279
++++++ +F ID D+ +W+A+++ + +
Sbjct: 422 IHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGD 481
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT-LYQGMQVHSYIIKMGFDSNVPVCN 338
+ A ++F +M + + P+ T+ S + AC + QG Q H+ IK + + V +
Sbjct: 482 CDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGS 541
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
A++TMYA+ + +A +VF E + D VSWNS+I+ QH ++E F +M I+
Sbjct: 542 ALVTMYARKGSIDSARIVF-ERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIE 600
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA-FDVFVMNG-----------LMDIY 446
D TF V+ C H + K G FD VM+ ++D+Y
Sbjct: 601 MDGATFLAVIVGCT-----------HAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLY 649
Query: 447 IKCGSLGSARKLFNFMENP-DVVSWSSLI 474
+ G L L M P + W +L+
Sbjct: 650 SRAGKLDETMNLIEGMPFPAGAMVWRTLL 678
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 183/398 (45%), Gaps = 54/398 (13%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
++ STY+ +I C++L+ L L R++H +L D + I++ Y KCG L+DA
Sbjct: 299 KLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFN 358
Query: 92 GFDKMP-QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F MP +NVVSWTAMI GC QN A L+ +M + V P +FT+ +++ A +
Sbjct: 359 IFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPI- 417
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
L Q+HA +IK+ + AL+A Y+K +A ++F I KDV +W +M++
Sbjct: 418 ---LLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLS 474
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------- 249
+S+ G A F +M G +PNEF S AC+
Sbjct: 475 CYSQAGDCDGATNVFIKMSMQG-MKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRY 533
Query: 250 --------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
+ ARI+F DL SWN++I+G A H + EA+ F +
Sbjct: 534 QDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQ 593
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC----NAILTMYA 345
M + DG T +++ C + +G Q Y M D N+ + ++ +Y+
Sbjct: 594 METVGIEMDGATFLAVIVGCTHAGLVKEGQQ---YFDSMVMDHNISPTMEHYSCMVDLYS 650
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ L + + + + A ++ W +++ AC H E
Sbjct: 651 RAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVE 688
>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
Length = 1068
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 185/582 (31%), Positives = 286/582 (49%), Gaps = 49/582 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T + A L + +++H + DV N ++ MY G + DA F +M
Sbjct: 300 TITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRM 359
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++ +SWTAMI+G +N + A+++Y M V P T S + AC+ LG + +G
Sbjct: 360 ETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGI 419
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+LH +++ NAL+ MY K I A VF +A KDV SW SMIA F
Sbjct: 420 KLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNH 479
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSAC---------------------------- 248
+AL +F ML H +PN F + SAC
Sbjct: 480 RSFDALYYFRYMLGH--VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVP 537
Query: 249 ------------SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+++A F+ D+ SWN +++G +H + A+SLF++M L
Sbjct: 538 NALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLG 597
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
G CAC+GRL + G+++H GF V V NA+L MYAK + A+ V
Sbjct: 598 RMGACSALAACACLGRLDV--GIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEV 655
Query: 357 FKELGKNADSVSWNSIIAA-CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
FK + + D VSW+S+IA C H + L+ + R + +KP+ +TF + ACA
Sbjct: 656 FKFMAEK-DVVSWSSMIAGFCFNHRSFDALY--YFRYMLGHVKPNSVTFIAALSACAATG 712
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+L ++H Y+ + G+ + +V N L+D+Y+KCG A F+ DVVSW+ ++
Sbjct: 713 ALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLS 772
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
G+ G GD AL LF +M +G P+ VT V ++ ACS G+V +G L+ ++ I+
Sbjct: 773 GFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIV 831
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
P +H +C+VDLL+R G + EA + IN+M D VW +LL
Sbjct: 832 PNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALL 873
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 171/614 (27%), Positives = 290/614 (47%), Gaps = 53/614 (8%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+ +LC +AL + S + Y L C R++ G +
Sbjct: 71 LRALCSHGQLAQALWLLESSPEPPD----EGAYVALFRLCEWRRAVDAGMRACARADAEH 126
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ L N +L+M + G + A F KMP+R+V SW M+ G + +A+ LY
Sbjct: 127 PSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYY 186
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+ML +G+ P +TF +++ C G+ +GR++HAHV++ G + NAL+ MY K
Sbjct: 187 RMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCG 246
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I+ AR VF G+A D SW +MIA + +E EA + QPN SV
Sbjct: 247 DIVAARKVFDGMAMTDCISWNAMIAGHFE-NHECEAGLELFLTMLENEVQPNLMTITSVT 305
Query: 246 SACSNFARI----------------------------------------LFNEIDSPDLA 265
A + + +F+ +++ D
Sbjct: 306 VASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAM 365
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW A+I+G + ++A+ +++ M + PD +T+ S L AC L G+++H
Sbjct: 366 SWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELA 425
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA-CLQHNQAEE 384
GF V V NA+L MYAK + A+ VFK + + D VSW+S+IA C H +
Sbjct: 426 QNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEK-DVVSWSSMIAGFCFNHRSFDA 484
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
L+ + R + +KP+ +TF + ACA +L ++H Y+ + G+ + +V N L+D
Sbjct: 485 LY--YFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLD 542
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y+KCG A F+ DVVSW+ ++ G+ G GD AL LF +M + S +
Sbjct: 543 LYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQM--MYTSLGRMG 600
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
L AC+ +G ++ G+ L+ + +N+ G I + ++++ A++ + +A + M
Sbjct: 601 ACSALAACACLGRLDVGIKLHELAQNK-GFIRYVVVANALLEMYAKSKHIDKAIEVFKFM 659
Query: 565 ACDADIVVWKSLLA 578
A + D+V W S++A
Sbjct: 660 A-EKDVVSWSSMIA 672
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 200/441 (45%), Gaps = 50/441 (11%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
++ C + +AL Y F +++ T+ +SAC++ +L+ G+++H ++L
Sbjct: 472 IAGFCFNHRSFDAL--YYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCG 529
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ + N +L++Y KCG A F +++VVSW M++G + + A+ L+
Sbjct: 530 IGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFN 589
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
QM+ + + G+ S + AC+ LG + +G +LH +++ NAL+ MY K
Sbjct: 590 QMMYTSL--GRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSK 647
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I A VF +A KDV SW SMIA F +AL +F ML H +PN F +
Sbjct: 648 HIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGH--VKPNSVTFIAAL 705
Query: 246 SAC----------------------------------------SNFARILFNEIDSPDLA 265
SAC +++A F+ D+
Sbjct: 706 SACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVV 765
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV-HSY 324
SWN +++G +H + A+SLF++M + PD +T L+CAC + QG ++ H
Sbjct: 766 SWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTF-VLMCACSRAGMVIQGWELFHRR 824
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
K N+ ++ + ++ L A + + D+ W +++ C H E
Sbjct: 825 TEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHV-E 883
Query: 385 LFRLFSRMLASQIKPDHITFN 405
L L ++++ +++P+ + ++
Sbjct: 884 LGELAAKVIL-ELEPNDVAYH 903
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/464 (34%), Positives = 251/464 (54%), Gaps = 34/464 (7%)
Query: 117 ENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+ +K +++L ++ P + ++I AC ++ LGR++HAH S + N
Sbjct: 67 QQKRVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISN 126
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
L+ MY K ++DA+ +F + +D+ SW +MI ++KLG LE
Sbjct: 127 RLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLG-RLEQ-------------- 171
Query: 236 PNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR LF+E+ D SWNA I+G +H+ EA+ LF M+ E
Sbjct: 172 ----------------ARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHER 215
Query: 296 LP-DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ T+ S L A L G ++H Y+I+ + + V +A+L +Y KC L A
Sbjct: 216 SSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEAR 275
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F ++ K+ D VSW ++I C + + EE F LF ++ S ++P+ TF V+ ACA
Sbjct: 276 GIFDQM-KDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADH 334
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
A+ + ++H Y+ G F ++ L+ +Y KCG+ AR++FN M PD+VSW+SLI
Sbjct: 335 AAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLI 394
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
+GYAQ G DEAL F + G P+ VT VGVL+AC+H GLV++GL + ++ ++G+
Sbjct: 395 VGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGL 454
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ T +H +CV+DLLAR+G EAE+ I+ M D +W SLL
Sbjct: 455 MHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLG 498
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 193/451 (42%), Gaps = 78/451 (17%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
V LC+Q EA+ + + + R+ Y+ LI+AC R+L+LGR+VH H S
Sbjct: 62 VDVLCQQKRVKEAVELLHRTDHRPSARV----YSTLIAACVRHRALELGRRVHAHTKASN 117
Query: 66 CQPDVVLQNHILNMYGKCGSL-------------------------------EDARMGFD 94
P V + N +L+MY KCGSL E AR FD
Sbjct: 118 FVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFD 177
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLY-IQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
+MPQR+ SW A I+G + Q +A++L+ + +FT S + A + + +
Sbjct: 178 EMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLR 237
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
LG+++H ++I++E + +AL+ +Y K + +AR +F + +DV SW +MI
Sbjct: 238 LGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCF 297
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------------------- 250
+ G E F +++ G +PNE+ F V +AC++
Sbjct: 298 EDGRREEGFLLFRDLMQSGV-RPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGS 356
Query: 251 -----------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
AR +FNE+ PDL SW +LI G A + +EA+ F +
Sbjct: 357 FAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQS 416
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
PD +T +L AC + +G++ HS K G ++ + A+
Sbjct: 417 GTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKE 476
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
A + + D W S++ C H E
Sbjct: 477 AENIIDNMPVKPDKFLWASLLGGCRIHGNLE 507
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 144/248 (58%), Gaps = 1/248 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S N EAL + Q + T + ++A +++ L+LG+++H +++
Sbjct: 188 NAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLI 247
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ D V+ + +L++YGKCGSL++AR FD+M R+VVSWT MI C ++ + +
Sbjct: 248 RTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFL 307
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ ++QSGV P ++TF ++ AC+ + LG+++H +++ + + A +AL+ MY+
Sbjct: 308 LFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYS 367
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K AR VF+ + + D+ SW S+I +++ G EAL HF E+L +P++ +
Sbjct: 368 KCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEAL-HFFELLLQSGTKPDQVTYV 426
Query: 243 SVFSACSN 250
V SAC++
Sbjct: 427 GVLSACTH 434
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 174/572 (30%), Positives = 287/572 (50%), Gaps = 58/572 (10%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ 113
RKV+D + + V N +++ + K G + AR FD MP R VV+WT ++ ++
Sbjct: 67 ARKVYDEM----PHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYAR 122
Query: 114 NYQENDAIKLYIQMLQSG--VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK--SEHGS 169
N ++A KL+ QM +S +P TF +++ C+ Q+HA +K +
Sbjct: 123 NSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNP 182
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
L N L+ Y + R+ A +F I KD ++ ++I + K G E++ F +M
Sbjct: 183 FLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMR 242
Query: 230 HHGAYQPNEFIFGSVFSAC---SNFA---------------------------------- 252
G +QP++F F V A +FA
Sbjct: 243 QSG-HQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRV 301
Query: 253 ---RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR----DRELLPDGLTVHSL 305
R+LF+E+ D S+N +I+ + ++ F EM+ DR P ++
Sbjct: 302 LETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFP----FATM 357
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
L +L G Q+H + DS + V N+++ MYAKC + A L+FK L +
Sbjct: 358 LSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRT- 416
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
+VSW ++I+ +Q +LF++M S ++ D TF V+ A A ASL + QLH
Sbjct: 417 TVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHA 476
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
+I ++G +VF +GL+D+Y KCGS+ A ++F M + + VSW++LI +A G G+
Sbjct: 477 FIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEA 536
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
A+ F +M G+ P+ V+++GVLTACSH G VE+G ++ M YGI P ++H +C++
Sbjct: 537 AIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACML 596
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
DLL R G EAE +++M + D ++W S+L
Sbjct: 597 DLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 146/286 (51%), Gaps = 14/286 (4%)
Query: 34 RPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
R +A ++S ++L SLQ+GR++H LL+ + + N +++MY KC E+A + F
Sbjct: 350 RNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIF 409
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
+PQR VSWTA+I+G Q +KL+ +M S + Q TF +++KA + S+
Sbjct: 410 KSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLL 469
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
LG+QLHA +I+S + ++ + + L+ MY K I DA VF + ++ SW ++I+A +
Sbjct: 470 LGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHA 529
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEID-----SPD 263
G A+ F +M+ G QP+ V +ACS+ + F + +P
Sbjct: 530 DNGDGEAAIGAFAKMIESG-LQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPK 588
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+ ++ + + EA L EM PD + S+L AC
Sbjct: 589 KKHYACMLDLLGRNGRFAEAEKLMDEM---PFEPDEIMWSSVLNAC 631
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 187/436 (42%), Gaps = 54/436 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ K LY E++ + + + T++G++ A L LG+++H +
Sbjct: 219 NTLITGYEKDGLYTESIHLF-LKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSV 277
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D + N IL+ Y K + + RM FD+MP+ + VS+ +I+ SQ Q ++
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLH 337
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ +M G F F +++ + L S+ +GRQLH + + S L N+L+ MY
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYA 397
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + +A +F + ++ SW ++I+ + + G L F +M + ++ F
Sbjct: 398 KCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM-RGSNLRADQSTFA 456
Query: 243 SVFSACSNFARIL----------------------------------------FNEIDSP 262
+V A ++FA +L F E+
Sbjct: 457 TVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR 516
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG---M 319
+ SWNALI+ A + + A+ F++M + L PD +++ +L AC + QG
Sbjct: 517 NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYF 576
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
Q S I + C +L + + A + E+ D + W+S++ AC H
Sbjct: 577 QAMSPIYGITPKKKHYAC--MLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIH 634
Query: 380 -NQ------AEELFRL 388
NQ AE+LF +
Sbjct: 635 KNQSLAERAAEKLFSM 650
>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
Length = 849
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 173/597 (28%), Positives = 298/597 (49%), Gaps = 47/597 (7%)
Query: 26 QNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK-CQPDVVLQNHILNMYGKCG 84
QN + + P+ Y L+ + +L + + HI SK D +L N ++ YGKCG
Sbjct: 74 QNQKSGFVDPAAYVSLLKQSGDVTAL---KTIQAHISHSKRFAGDRLLLNCVVEAYGKCG 130
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
++DAR+ F + NV SWT ++A +QN ++L QM GV P T ++I
Sbjct: 131 CVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIG 190
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSH-LIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
A S LG+ R++HA + ++ ++ ALI MY K I A VF KD+
Sbjct: 191 AVSELGNWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLA 250
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------ 251
+MI+A+ +LGY ++A+ FN + G QPN+ + +F AC+
Sbjct: 251 CCNAMISAYIQLGYTVDAVSTFNRIQPSG-LQPNQVTYALLFRACATNGVYSDARVAHMC 309
Query: 252 ----------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEA 283
AR +F+ + ++ +WN +IAG A +EA
Sbjct: 310 FILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEA 369
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
+ L+ M + PD +T ++L +C L G +H +++ G+DS++ V +A++TM
Sbjct: 370 LQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITM 429
Query: 344 YAKCSVLCNALLVF-KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
Y+ C L +A+ VF K + ++ +SW +++ A ++ + LF +M ++ + +
Sbjct: 430 YSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVRANVV 489
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
TF + AC+ + +L + + TG DV + L+++Y KCG L A ++F+++
Sbjct: 490 TFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYL 549
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
++V+W++++ +Q G + +L M G PN +TL+ +L CSH GLV + +
Sbjct: 550 SFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAV 609
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+R M + ++PT EH C+VDLL R+G + E E FI+ D V+W SLL S
Sbjct: 610 SYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGS 666
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 224/504 (44%), Gaps = 82/504 (16%)
Query: 20 VAYDFSQNNTNIRIRPS-------TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
+ Y +T RI+PS TYA L AC++ R H +LSK +PDVV+
Sbjct: 262 LGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVV 321
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
+++MY +CGSLEDAR FD+MP +NVV+W MIAG +Q ++A++LY+ M +GV
Sbjct: 322 NTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGV 381
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
P + TF +++++CS + GR +H HV+ + + S L +ALI MY+ + DA +
Sbjct: 382 EPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVD 441
Query: 193 VF-SGI-ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
VF G+ V SW +M+ A ++ G AL F +M G + N F S ACS+
Sbjct: 442 VFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGV-RANVVTFVSTIDACSS 500
Query: 251 ----------FARIL------------------------------FNEIDSPDLASWNAL 270
F R++ F+ + ++ +WN +
Sbjct: 501 IGALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYLSFKNIVTWNTI 560
Query: 271 IAGVASHSNANEAMS--LFSEMRDRELLPDGLTVHSLLCAC-----IGRLTLYQGMQVHS 323
+A AS N E +S L EM P+ +T+ ++L C + + Y V+
Sbjct: 561 LA--ASSQNGEETLSDELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYG 618
Query: 324 YIIKMGFDSNVPVCN---AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+ + VP ++ + + L + DSV W S++ +C+ H+
Sbjct: 619 HCL-------VPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHS 671
Query: 381 QAEELFRLFSRMLASQIK---PDHITFN--------DVMGACAKMASLEMVT--QLHCYI 427
E R R+L K P + N D + + AK+A + Q YI
Sbjct: 672 DVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLDAVKSLAKLAGERAMKKEQSRSYI 731
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGS 451
G+ + V GL + K G+
Sbjct: 732 EVNGVVHEFGVRAGLHRLGEKIGA 755
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 207/465 (44%), Gaps = 63/465 (13%)
Query: 7 SSLCKQNLYNEALVAYDFSQNNTN------------IRIRPS--TYAGLISACSSLRSLQ 52
SS+ N+Y+ ++ ++QN + + + P+ T A +I A S L +
Sbjct: 140 SSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGNWD 199
Query: 53 LGRKVHDHILLSKCQ--PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
RK+H + CQ DVVL +++MY KCG + A + FD+ +++ AMI+
Sbjct: 200 EARKIHARAA-ATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISA 258
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
Q DA+ + ++ SG+ P Q T+ + +AC+ G R H I S+
Sbjct: 259 YIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPD 318
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
++ AL++MY++ + DAR VF + K+V +W MIA +++ GY EAL + M
Sbjct: 319 VVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEA 378
Query: 231 HGAYQPNEFIFGSVFSACS-----NFARILFNEI-------------------------- 259
G +P+E F +V +CS R + +
Sbjct: 379 AGV-EPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLG 437
Query: 260 DSPD-----------LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCA 308
D+ D + SW A++ + + A++LF +M + + +T S + A
Sbjct: 438 DAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVRANVVTFVSTIDA 497
Query: 309 CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSV 367
C L +G + +I G +V + +++ +Y KC L AL VF L KN V
Sbjct: 498 CSSIGALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYLSFKNI--V 555
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
+WN+I+AA Q+ + L M +P+ +T +++ C+
Sbjct: 556 TWNTILAASSQNGEETLSDELLQEMDLDGAQPNEMTLLNMLFGCS 600
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 149/323 (46%), Gaps = 10/323 (3%)
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
++ P + L S + + ++ E + D SLL G +T +
Sbjct: 43 VEEPQAHDYAPLAPPTLSDEDVKQKLASLEEQNQKSGFVDPAAYVSLLKQS-GDVTALKT 101
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
+Q H K F + + N ++ Y KC + +A LVF + ++ + SW ++AA Q
Sbjct: 102 IQAHISHSKR-FAGDRLLLNCVVEAYGKCGCVKDARLVFSSI-RHPNVYSWTILLAAYAQ 159
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVF 437
+ + + L +M + P+ +T V+GA +++ + + ++H T L +DV
Sbjct: 160 NGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGNWDEARKIHARAAATCQLTYDVV 219
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
++ L+D+Y KCG + A +F+ N D+ +++I Y Q G +A+ F R++ G
Sbjct: 220 LVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSG 279
Query: 498 VSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
+ PN VT + AC+ G+ + H+ I+ + P + +V + +R G +
Sbjct: 280 LQPNQVTYALLFRACATNGVYSDARVAHMCFILSK---LRPDVVVNTALVSMYSRCGSLE 336
Query: 556 EAEDFINQMACDADIVVWKSLLA 578
+A ++M ++V W ++A
Sbjct: 337 DARRVFDRMP-GKNVVTWNVMIA 358
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/513 (30%), Positives = 261/513 (50%), Gaps = 42/513 (8%)
Query: 107 MIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE 166
M+ G +++ + A+ + +M V P + F ++K C + G+++H VI S
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
+L A ++ MY K +I DA N+F + +D+ W +MI+ +++ G+ AL
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 227 EMLHHGAYQPNEFIFGSVFSACSN------------------------------------ 250
M G ++P+ S+ A ++
Sbjct: 121 RMSEEG-HRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179
Query: 251 ----FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
AR++F+ +D + SWN++I G +A AM +F +M D + P +TV L
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
AC L +G VH + ++ DS+V V N++++MY+KC + A +FK L +N
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNL-RNKTL 298
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
VSWN++I Q+ E F M + IKPD T V+ A A+++ +H
Sbjct: 299 VSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGL 358
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
+ + L +VFVM L+D+Y KCG++ +ARKLF+ M V++W+++I GY G G +
Sbjct: 359 VIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTS 418
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
++LF M+ + PN +T + L+ACSH GLVEEGL + M+ +YGI PT +H +VD
Sbjct: 419 VELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVD 478
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
LL RAG +++A DFI +M I V+ ++L +
Sbjct: 479 LLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGA 511
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 198/428 (46%), Gaps = 44/428 (10%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP Y L+ C L+ G+++H ++ S ++ ++NMY KC + DA
Sbjct: 26 VRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAY 85
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+MP+R++V W MI+G +QN A+ L ++M + G P T SI+ A +
Sbjct: 86 NMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTR 145
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ +G +H +V+++ S + AL+ MY+K + AR +F G+ + V SW SMI
Sbjct: 146 LLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMID 205
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFG---------------------------- 242
+ + G A+ F +ML G N + G
Sbjct: 206 GYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDS 265
Query: 243 ---------SVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
S++S C + A +F + + L SWNA+I G A + NEA++ F EM+
Sbjct: 266 DVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQ 325
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
R + PD T+ S++ A Q +H +I+ D NV V A++ MYAKC +
Sbjct: 326 SRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIH 385
Query: 352 NALLVFKELGKNADSV-SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
A +F + NA V +WN++I H + LF M IKP+ ITF + A
Sbjct: 386 TARKLFDMM--NARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSA 443
Query: 411 CAKMASLE 418
C+ +E
Sbjct: 444 CSHSGLVE 451
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 135/290 (46%), Gaps = 18/290 (6%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++P+ T G + AC+ L L+ G+ VH + K DV + N +++MY KC ++ A
Sbjct: 228 VQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAA 287
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F + + +VSW AMI G +QN N+A+ + +M + P FT S+I A + L
Sbjct: 288 DIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELS 347
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ +H VI+ ++ AL+ MY K I AR +F + + V +W +MI
Sbjct: 348 IPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMID 407
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS---- 261
+ G ++ F EM G +PN+ F SACS+ + F +
Sbjct: 408 GYGTHGLGKTSVELFKEM-KKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGI 466
Query: 262 -PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH-SLLCAC 309
P + + A++ + N+A +M + G+TV+ ++L AC
Sbjct: 467 EPTMDHYGAMVDLLGRAGRLNQAWDFIQKMP----IKPGITVYGAMLGAC 512
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
NEAL A+ Q+ NI+ T +I A + L + + +H ++ +V +
Sbjct: 315 NEALNAFCEMQSR-NIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTA 373
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
+++MY KCG++ AR FD M R+V++W AMI G + +++L+ +M + + P
Sbjct: 374 LVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPN 433
Query: 136 QFTFGSIIKACSGLGSVCLG 155
TF + ACS G V G
Sbjct: 434 DITFLCALSACSHSGLVEEG 453
>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 709
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 188/614 (30%), Positives = 294/614 (47%), Gaps = 86/614 (14%)
Query: 23 DFSQN--NTNIRIRPSTYAGLIS---ACSSL-------RSLQLGRKVHDHILLSKC--QP 68
DF N N+N S LI+ C SL RSL + +H H + S P
Sbjct: 55 DFRNNLSNSNTTKALSKSKSLIANVHRCDSLLRHYAATRSLNKTKILHGHTITSGLLHSP 114
Query: 69 DVV-LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
+ + L +H+ Y CG + AR FD + ++ W A+I DA++++ M
Sbjct: 115 NFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSM 174
Query: 128 LQSG-VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
+ SG P ++TF +IKACS + + +G +H + S S++ QN+L+AMY +
Sbjct: 175 ICSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGK 234
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH---------------- 230
+ AR VF+ + ++ V SW +MI+ + + G EAL FN M+
Sbjct: 235 VGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPS 294
Query: 231 -------------HGAYQPNEF--------IFGSVFSACSNF--ARILFNEIDSPDLASW 267
H Q N ++S C A ++F E D+ +W
Sbjct: 295 CGYLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITW 354
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
++I G + NA A++L M+ ++P+ +T+ SLL AC
Sbjct: 355 TSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACA----------------- 397
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
++ MYAKC+ + + VF + K +V WN++++ + + A E
Sbjct: 398 -----------SLCYMYAKCNAVSYSFQVFAKTSKK-RTVPWNALLSGLIHNELAREAVG 445
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
LF ML +++ +H TFN V+ A A +A L+ V LH Y+ ++G + V+ GL+D+Y
Sbjct: 446 LFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYS 505
Query: 448 KCGSLGSARKLFNFMEN--PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
KCGSL A K+F+ + N D++ WS LI GY G G+ A+ LF +M G+ PN +T
Sbjct: 506 KCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITF 565
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
VL ACSH GLV++GL L++ M Y P H +CVVDLL RAG + EA D I M
Sbjct: 566 TSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMP 625
Query: 566 CDADIVVWKSLLAS 579
+ +W +LL +
Sbjct: 626 FQQNHSIWGALLGA 639
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 204/450 (45%), Gaps = 28/450 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + EAL ++ S + + +T + +C L+ L+LG KVH +
Sbjct: 254 NTMISGWFQNGRPEEALAVFN-SMMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQ 312
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ Q + ++N +++MY +CG +++A + F + +++V++WT+MI G N A+
Sbjct: 313 KNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALA 372
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGL---GSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
L M GV+P T S++ AC+ L + C V + NAL++
Sbjct: 373 LCPAMQLDGVVPNAVTLASLLSACASLCYMYAKCNAVSYSFQVFAKTSKKRTVPWNALLS 432
Query: 180 MYTKFDRILDARNVFSGIARKDV----TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
+ +A +F + ++V ++ S+I A++ L + + + ++ G
Sbjct: 433 GLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFIS 492
Query: 236 PNEFIFG--SVFSACS--NFARILFNEIDS--PDLASWNALIAGVASHSNANEAMSLFSE 289
I G ++S C ++A +F+EI + D+ W+ LIAG H + A+ LF++
Sbjct: 493 KIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQ 552
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP---VCNAILTMYAK 346
M + P+ +T S+L AC R + G+ + Y+I+ S +P C ++ + +
Sbjct: 553 MVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTC--VVDLLGR 610
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE----ELFRLFSRMLASQIKPDHI 402
L A + K + + W +++ ACL H E RLF L + ++I
Sbjct: 611 AGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFE--LEPESTGNYI 668
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGL 432
++ A + E V + ++K GL
Sbjct: 669 LLANIYAAVGRWKDAENVRHI---MSKIGL 695
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/528 (31%), Positives = 284/528 (53%), Gaps = 48/528 (9%)
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+R++VSW+A+I+ + N + +AI + ML+ G P ++ F + +ACS ++ LG+
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 158 LHAHVIKSEH-GSHLIAQNALIAMYTKFDRILD-ARNVFSGIARKDVTSWGSMIAAFSKL 215
+ ++K+ + S + ALI M+ K + L+ A VF + ++V +W MI F +L
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G+ +A+ F +M+ G Y P+ F V SAC+
Sbjct: 124 GFSRDAVDLFLDMVLSG-YVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCV 182
Query: 252 -------------------ARILFNEIDSPDLASWNALIAG-VASHSNANEAMSLFSEMR 291
AR +F+ + ++ SW A+I G V S EA+ LF EM
Sbjct: 183 GCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMV 242
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
++ P+ T S+L AC ++ G QV++ ++KM S V N++++MY++C +
Sbjct: 243 QGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNME 302
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
NA F L + + VS+N+I+ A + +EE F LF+ + + + TF ++
Sbjct: 303 NARKAFDVLFEK-NLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGA 361
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ + ++ Q+H I K+G ++ + N L+ +Y +CG++ +A ++FN M + +V+SW+
Sbjct: 362 SSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWT 421
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
S+I G+A+ G AL+ F +M GVSPN VT + VL+ACSHVGL+ EGL ++ M+ E
Sbjct: 422 SMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVE 481
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+GI+P EH +CVVDLL R+G + EA + +N M AD +V ++ L +
Sbjct: 482 HGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGA 529
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 138/472 (29%), Positives = 229/472 (48%), Gaps = 49/472 (10%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSK-CQPDVVLQNHILNMYGKC-GSLEDARMGFDK 95
+ G+ ACS+ ++ LG+ + +L + + DV + +++M+ K G LE A FD+
Sbjct: 45 FTGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDR 104
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP RNVV+WT MI Q DA+ L++ M+ SG +P +FT ++ AC+ +G + LG
Sbjct: 105 MPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLG 164
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKF---DRILDARNVFSGIARKDVTSWGSMIAAF 212
RQ H V+KS + +L+ MY K + DAR VF + +V SW ++I +
Sbjct: 165 RQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGY 224
Query: 213 SKLGY-ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
+ G + EA+ F EM+ G +PN F F SV AC+N
Sbjct: 225 VQSGGCDREAIELFLEMV-QGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLAS 283
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
AR F+ + +L S+N ++ A N+ EA LF+E+
Sbjct: 284 INCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIE 343
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ T SLL + +G Q+HS I+K GF SN+ +CNA+++MY++C +
Sbjct: 344 GAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIE 403
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A VF E+G + + +SW S+I +H A F +ML + + P+ +T+ V+ AC
Sbjct: 404 AAFQVFNEMG-DGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSAC 462
Query: 412 AKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
+ + + E + + G+ + ++D+ + G L A +L N M
Sbjct: 463 SHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSM 514
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 194/388 (50%), Gaps = 46/388 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC---GSLEDARMGF 93
T +G++SAC+ + L LGR+ H ++ S DV + +++MY KC GS++DAR F
Sbjct: 147 TLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVF 206
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQ-ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
D+MP NV+SWTA+I G Q+ + +AI+L+++M+Q V P FTF S++KAC+ L +
Sbjct: 207 DRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDI 266
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
LG Q++A V+K S N+LI+MY++ + +AR F + K++ S+ +++ A+
Sbjct: 267 WLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAY 326
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------ARIL------- 255
+K EA FNE+ G N F F S+ S S+ +RIL
Sbjct: 327 AKSLNSEEAFELFNEIEGAGT-GVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSN 385
Query: 256 -----------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
FNE+ ++ SW ++I G A H A A+ F +M +
Sbjct: 386 LHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLE 445
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ P+ +T ++L AC + +G++ S ++ G + ++ + + L
Sbjct: 446 AGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLE 505
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQH 379
A+ + + AD++ + + AC H
Sbjct: 506 EAMELVNSMPFKADALVLRTFLGACRVH 533
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 155/290 (53%), Gaps = 16/290 (5%)
Query: 32 RIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
+++P+ T++ ++ AC++L + LG +V+ ++ + + N +++MY +CG++E+A
Sbjct: 245 QVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENA 304
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD + ++N+VS+ ++ +++ +A +L+ ++ +G FTF S++ S +
Sbjct: 305 RKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSI 364
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G++ G Q+H+ ++KS S+L NALI+MY++ I A VF+ + +V SW SMI
Sbjct: 365 GAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMI 424
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS----------NFARILFNEI 259
F+K G+ AL F++ML G PNE + +V SACS +F +
Sbjct: 425 TGFAKHGFATRALETFHKMLEAGV-SPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHG 483
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
P + + ++ + + EAM L + M D L + + L AC
Sbjct: 484 IVPRMEHYACVVDLLGRSGHLEEAMELVNSM---PFKADALVLRTFLGAC 530
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 114/224 (50%), Gaps = 7/224 (3%)
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
+G D VSW+++I+ + +A E F ML P+ F V AC+ ++ +
Sbjct: 1 MGNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISL 60
Query: 420 VTQLHCYITKTG-LAFDVFVMNGLMDIYIKC-GSLGSARKLFNFMENPDVVSWSSLILGY 477
+ ++ KTG DV V L+D+++K G L SA K+F+ M + +VV+W+ +I +
Sbjct: 61 GKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRF 120
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
Q G +A+ LF M G P+ TL GV++AC+ +GL+ G + ++ +
Sbjct: 121 QQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDV 180
Query: 538 REHCSCVVDLLARA---GCVHEAEDFINQMACDADIVVWKSLLA 578
CS +VD+ A+ G V +A ++M +++ W +++
Sbjct: 181 CVGCS-LVDMYAKCVADGSVDDARKVFDRMPVH-NVMSWTAIIT 222
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/622 (28%), Positives = 297/622 (47%), Gaps = 104/622 (16%)
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+L+ P+V+ N +LN Y K G L DA F +MP R+V SW +++G Q+ Q +
Sbjct: 82 LLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVS 141
Query: 121 IKLYIQMLQSG-VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK--SEHGSHLIA---- 173
++ ++ M +SG P FT +K+C LG L QL A V K S+ S + A
Sbjct: 142 LETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVD 201
Query: 174 -------------------------QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+N+++A Y K + A +F + +DV SW M
Sbjct: 202 MFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMM 261
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------- 251
++A S+ G EAL +M G + + + S +AC+
Sbjct: 262 VSALSQSGRVREALDMVVDMQSKGV-RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL 320
Query: 252 -----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
A+ +FN + + +W LI+G + E++ LF+
Sbjct: 321 PHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFN 380
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+MR + D + +L+ C R+ L G Q+HS +K G V V N++++MYAKC
Sbjct: 381 QMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCD 440
Query: 349 VLCNALLVFK------------------ELGKNADS------------VSWNSIIAACLQ 378
L +A +F+ ++G A + ++WN+++ A +Q
Sbjct: 441 NLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQ 500
Query: 379 HNQAEELFRLFSRMLASQ-IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
H E+ R++ ML+ + ++PD +T+ + CA + + ++ Q+ K GL D
Sbjct: 501 HGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTS 560
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
V N ++ +Y KCG + ARK+F+F+ D+VSW+++I GY+Q G G +A+++F + G
Sbjct: 561 VANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRG 620
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
P+ ++ V VL+ CSH GLV+EG + +M+ + I P EH SC+VDLL RAG + EA
Sbjct: 621 AKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEA 680
Query: 558 EDFINQMACDADIVVWKSLLAS 579
+D I+ M VW +LL++
Sbjct: 681 KDLIDDMPMKPTAEVWGALLSA 702
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 222/478 (46%), Gaps = 42/478 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS+L + EAL + +R+ +TY ++AC+ L SL+ G+++H ++
Sbjct: 259 NMMVSALSQSGRVREALDMV-VDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVI 317
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D + + ++ +Y K G ++A+ F+ + RN V+WT +I+G Q ++++
Sbjct: 318 RNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVE 377
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ QM + QF ++I C +CLGRQLH+ +KS ++ N+LI+MY
Sbjct: 378 LFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYA 437
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K D + A +F + KD+ SW SMI A+S++G +
Sbjct: 438 KCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAK---------------------- 475
Query: 243 SVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL-PDGLT 301
AR F+ + ++ +WNA++ H + + ++ M E + PD +T
Sbjct: 476 ---------AREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVT 526
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
+L C G Q+ +K+G + V NA++TMY+KC + A VF L
Sbjct: 527 YVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN 586
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
D VSWN++I QH ++ +F +L KPD+I++ V+ C+ +V
Sbjct: 587 VK-DIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSG---LVQ 642
Query: 422 QLHCYITKTGLAFDVFV----MNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
+ Y A ++ + ++D+ + G L A+ L + M P W +L+
Sbjct: 643 EGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALL 700
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF-M 462
F D + +C +L LH + GLA VF+ N L+ Y+ CG+L AR+L +
Sbjct: 27 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 86
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS----------------------- 499
+P+V++ + ++ GYA+ G +A++LF RM + V+
Sbjct: 87 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 146
Query: 500 ---------PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
PN TL + +C +G L L +++ ++ E + +VD+ R
Sbjct: 147 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQ-KFDSQDDSEVAAALVDMFVR 205
Query: 551 AGCV 554
G V
Sbjct: 206 CGAV 209
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 179/587 (30%), Positives = 284/587 (48%), Gaps = 54/587 (9%)
Query: 44 ACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS----LEDARMGFDKMPQ- 98
A SS+R+ + G +H L S + N ++ Y C L A F +P
Sbjct: 23 AASSVRTRRAGDALHGWALKSGAASHTPVSNSLITFY--CSPPRPLLGAAFAVFADIPAG 80
Query: 99 -RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS--GVMPGQFTFGSIIKACSGLGSVCLG 155
R+V SW +++ S+ +Q A+ + M+ S V+P +F ++ A + + S G
Sbjct: 81 LRDVASWNSLLNPLSR-HQPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAG 139
Query: 156 RQLHAHVIK--SEHGSH-LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
HA K S GS+ + AL+ MY K I DAR VF + ++ SW +M++ +
Sbjct: 140 AVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGY 199
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA------------------------- 247
+ EA F ML + NEF+ +V SA
Sbjct: 200 ATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGF 259
Query: 248 ---------------CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
C + A +F + +W+A+I G A + A+ A ++F +M
Sbjct: 260 VSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHS 319
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
P T +L A L G Q H ++K+GF+ V V +A++ MYAKC +
Sbjct: 320 AGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGD 379
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A F +L D V W ++I +Q+ + EE L+SRM + P ++T V+ ACA
Sbjct: 380 AKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACA 439
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+A+LE QLH I K G V L +Y KCG+L + +F M + D++SW+S
Sbjct: 440 CLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNS 499
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
+I G++Q G G +AL LF M+ G++P+ +T + VL ACSH+GLV+ G +R M +Y
Sbjct: 500 IISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDY 559
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G+IP +H +C+VD+L+RAG + EA+DFI + D +W+ +L +
Sbjct: 560 GLIPKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWRIVLGA 606
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 203/425 (47%), Gaps = 47/425 (11%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHD---HILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
P ++A + +A + + S G H + S +V + +LNMY K G++ DAR
Sbjct: 120 PHSFAAVFTAAARVPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARR 179
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGLG 150
FD+MP RN VSW AM++G + +A +L+ MLQ + +F +++ A S
Sbjct: 180 VFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPL 239
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ +G QLH V+K + +N+L+ MY K + + A VF ++ +W +MI
Sbjct: 240 GLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMIT 299
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA----------------------- 247
+++ G A F +M H + P EF F + +A
Sbjct: 300 GYAQNGEADCAATMFLQM-HSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFE 358
Query: 248 -----------------CSNFARILFNEI-DSPDLASWNALIAGVASHSNANEAMSLFSE 289
C+ A+ F+++ D D+ W A+I G + EA+ L+S
Sbjct: 359 RQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSR 418
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M ++P LTV S+L AC L G Q+H+ I+K GF V A+ TMY+KC
Sbjct: 419 MDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGN 478
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L ++++VF+ + + D +SWNSII+ QH + + LF M I PDHITF +V+
Sbjct: 479 LEDSMVVFRRM-PDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLC 537
Query: 410 ACAKM 414
AC+ M
Sbjct: 538 ACSHM 542
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ G+++A S + +L +G++ H ++ + V +++ +++MY KCG DA+ GF ++
Sbjct: 328 TFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQL 387
Query: 97 PQ-RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+VV WTAMI G QN + +A+ LY +M + GVMP T S+++AC+ L ++ G
Sbjct: 388 YDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPG 447
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+QLHA ++K G AL MY+K + D+ VF + +D+ SW S+I+ FS+
Sbjct: 448 KQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQH 507
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
G +AL F EM G P+ F +V ACS+ +
Sbjct: 508 GRGRDALDLFEEMKLEG-IAPDHITFINVLCACSHMGLV 545
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 132/267 (49%), Gaps = 15/267 (5%)
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS----VLCNALLVF 357
+ L CA T G +H + +K G S+ PV N+++T Y CS +L A VF
Sbjct: 17 IEHLRCAASSVRTRRAGDALHGWALKSGAASHTPVSNSLITFY--CSPPRPLLGAAFAVF 74
Query: 358 KELGKN-ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ-IKPDHITFNDVMGACAKMA 415
++ D SWNS++ +H L S M ++ + P +F V A A++
Sbjct: 75 ADIPAGLRDVASWNSLLNPLSRHQPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVP 134
Query: 416 SLEMVTQLH---CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
S H C + + + +VFV L+++Y K G++ AR++F+ M + + VSW++
Sbjct: 135 SASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAA 194
Query: 473 LILGYAQFGCGDEALKLFTRM-RSLGVSPNLVTLVGVLTACS-HVGLVEEGLHLYRIMEN 530
++ GYA C +EA +LF M + + N VL+A S +GL+ G+ L+ ++
Sbjct: 195 MVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLL-IGVQLHGLVLK 253
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEA 557
+ G++ + +V + A+A C+ A
Sbjct: 254 D-GLVGFVSVENSLVTMYAKAECMDAA 279
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
Query: 15 YNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
+ EAL+ Y + PS T ++ AC+ L +L+ G+++H IL +
Sbjct: 409 HEEALMLYSRMDKEG---VMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSV 465
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
+ MY KCG+LED+ + F +MP R+++SW ++I+G SQ+ + DA+ L+ +M G+
Sbjct: 466 GTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGI 525
Query: 133 MPGQFTFGSIIKACSGLGSVCLG 155
P TF +++ ACS +G V G
Sbjct: 526 APDHITFINVLCACSHMGLVDRG 548
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/622 (28%), Positives = 297/622 (47%), Gaps = 104/622 (16%)
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+L+ P+V+ N +LN Y K G L DA F +MP R+V SW +++G Q+ Q +
Sbjct: 62 LLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVS 121
Query: 121 IKLYIQMLQSG-VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK--SEHGSHLIA---- 173
++ ++ M +SG P FT +K+C LG L QL A V K S+ S + A
Sbjct: 122 LETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVD 181
Query: 174 -------------------------QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+N+++A Y K + A +F + +DV SW M
Sbjct: 182 MFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMM 241
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------- 251
++A S+ G EAL +M G + + + S +AC+
Sbjct: 242 VSALSQSGRVREALDMVVDMQSKGV-RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL 300
Query: 252 -----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
A+ +FN + + +W LI+G + E++ LF+
Sbjct: 301 PHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFN 360
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+MR + D + +L+ C R+ L G Q+HS +K G V V N++++MYAKC
Sbjct: 361 QMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCD 420
Query: 349 VLCNALLVFK------------------ELGKNADS------------VSWNSIIAACLQ 378
L +A +F+ ++G A + ++WN+++ A +Q
Sbjct: 421 NLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQ 480
Query: 379 HNQAEELFRLFSRMLASQ-IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
H E+ R++ ML+ + ++PD +T+ + CA + + ++ Q+ K GL D
Sbjct: 481 HGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTS 540
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
V N ++ +Y KCG + ARK+F+F+ D+VSW+++I GY+Q G G +A+++F + G
Sbjct: 541 VANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRG 600
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
P+ ++ V VL+ CSH GLV+EG + +M+ + I P EH SC+VDLL RAG + EA
Sbjct: 601 AKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEA 660
Query: 558 EDFINQMACDADIVVWKSLLAS 579
+D I+ M VW +LL++
Sbjct: 661 KDLIDDMPMKPTAEVWGALLSA 682
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 222/478 (46%), Gaps = 42/478 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS+L + EAL + +R+ +TY ++AC+ L SL+ G+++H ++
Sbjct: 239 NMMVSALSQSGRVREALDMV-VDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVI 297
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D + + ++ +Y K G ++A+ F+ + RN V+WT +I+G Q ++++
Sbjct: 298 RNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVE 357
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ QM + QF ++I C +CLGRQLH+ +KS ++ N+LI+MY
Sbjct: 358 LFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYA 417
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K D + A +F + KD+ SW SMI A+S++G +
Sbjct: 418 KCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAK---------------------- 455
Query: 243 SVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL-PDGLT 301
AR F+ + ++ +WNA++ H + + ++ M E + PD +T
Sbjct: 456 ---------AREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVT 506
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
+L C G Q+ +K+G + V NA++TMY+KC + A VF L
Sbjct: 507 YVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN 566
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
D VSWN++I QH ++ +F +L KPD+I++ V+ C+ +V
Sbjct: 567 VK-DIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSG---LVQ 622
Query: 422 QLHCYITKTGLAFDVFV----MNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
+ Y A ++ + ++D+ + G L A+ L + M P W +L+
Sbjct: 623 EGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALL 680
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF-M 462
F D + +C +L LH + GLA VF+ N L+ Y+ CG+L AR+L +
Sbjct: 7 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 66
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
+P+V++ + ++ GYA+ G +A++LF RM + V+ + G + ++ +E L
Sbjct: 67 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 126
Query: 523 HLYR 526
++R
Sbjct: 127 SMHR 130
>gi|413932453|gb|AFW67004.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 913
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 174/548 (31%), Positives = 278/548 (50%), Gaps = 41/548 (7%)
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
PDVVL L+ K G L DA FD+MP++NVV+WT I+GC++N + A ++ M
Sbjct: 68 PDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADM 127
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
L+SGV P F + + AC+ G++ LG Q+H+ +++ + + LI +Y++ +
Sbjct: 128 LESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSL 187
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
A VF + DV + S+++A + G A+ +M G QPNE S+ +
Sbjct: 188 RAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQG-LQPNEHTMTSMLAE 246
Query: 248 CSN------------------------------------FARILFNEIDSPDLASWNALI 271
C A+ +F ++S ++ SW +++
Sbjct: 247 CPRGIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMM 306
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
++A+ +FSEM + P+ L AC G + L G Q+H IK
Sbjct: 307 QLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSAC-GSVCL--GRQIHCSAIKRDLM 363
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
+++ V NA+L+MY + + V ++ +N D VSW + I+A Q+ +E+ L +
Sbjct: 364 TDIRVSNALLSMYGRSGFVSELEAVLGKI-ENPDLVSWTAAISANFQNGFSEKAVALLLQ 422
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M + P+ F+ + +CA +A L QLHC K G F V N L+++Y KCG
Sbjct: 423 MHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGR 482
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+GSAR F+ M+ DV+SW+SLI G AQ G + AL+ F+ M S P+ T + VL
Sbjct: 483 IGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVG 542
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
C+H GLV+EG +R M + YG+ PT H +C++D+L R G EA I M + D++
Sbjct: 543 CNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVL 602
Query: 572 VWKSLLAS 579
+WK+LLAS
Sbjct: 603 IWKTLLAS 610
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 207/458 (45%), Gaps = 45/458 (9%)
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
+VH + + D + + ++ +Y +CGSL A F +M +VV +T++++ +N
Sbjct: 157 QVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNG 216
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+ A+ + QM + G+ P + T S++ C +G Q+H +++K + A
Sbjct: 217 ELARAVDVLCQMTRQGLQPNEHTMTSMLAEC----PRGIGEQIHGYMLKVMGSQSVYAST 272
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
ALI Y+++ A+ VF + K+V SW SM+ + G +AL F+EM+ G Q
Sbjct: 273 ALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGV-Q 331
Query: 236 PNEFIFGSVFSAC-----------------------------SNFARILF--------NE 258
PNEF F SAC S + R F +
Sbjct: 332 PNEFAFSIALSACGSVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGK 391
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
I++PDL SW A I+ + + +A++L +M P+ S L +C L+QG
Sbjct: 392 IENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQG 451
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
Q+H +K+G D V NA++ MY+KC + +A L F + + D +SWNS+I Q
Sbjct: 452 RQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTH-DVMSWNSLIHGLAQ 510
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVF 437
H A FS M +S +PD TF V+ C + E T + GL
Sbjct: 511 HGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPS 570
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + G A ++ M PDV+ W +L+
Sbjct: 571 HYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLL 608
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 198/442 (44%), Gaps = 61/442 (13%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILL 63
VS+LC+ E A D T ++P+ T +++ C +G ++H ++L
Sbjct: 209 VSALCRNG---ELARAVDVLCQMTRQGLQPNEHTMTSMLAECPR----GIGEQIHGYMLK 261
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
V +++ Y + G A+ F+ + +NVVSW +M+ C ++ + +DA+++
Sbjct: 262 VMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRV 321
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ +M+ GV P +F F + AC GSVCLGRQ+H IK + + + NAL++MY +
Sbjct: 322 FSEMISEGVQPNEFAFSIALSAC---GSVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGR 378
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
+ + V I D+ SW + I+A + G+ +A+ +M H + PN++ F S
Sbjct: 379 SGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQM-HSEGFTPNDYAFSS 437
Query: 244 VFSACSNF----------------------------------------ARILFNEIDSPD 263
S+C++ AR+ F+ +D+ D
Sbjct: 438 GLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHD 497
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+ SWN+LI G+A H +AN A+ FSEM + PD T S+L C + +G
Sbjct: 498 VMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFR 557
Query: 324 YII-KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ- 381
+ + G ++ M + AL + + + D + W +++A+C H
Sbjct: 558 QMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRNL 617
Query: 382 ------AEELFRLFSRMLASQI 397
A++L L R AS +
Sbjct: 618 DIGKLAADKLMELSERDSASYV 639
>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 719
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 174/548 (31%), Positives = 278/548 (50%), Gaps = 41/548 (7%)
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
PDVVL L+ K G L DA FD+MP++NVV+WT I+GC++N + A ++ M
Sbjct: 68 PDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADM 127
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
L+SGV P F + + AC+ G++ LG Q+H+ +++ + + LI +Y++ +
Sbjct: 128 LESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSL 187
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
A VF + DV + S+++A + G A+ +M G QPNE S+ +
Sbjct: 188 RAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQG-LQPNEHTMTSMLAE 246
Query: 248 CSN------------------------------------FARILFNEIDSPDLASWNALI 271
C A+ +F ++S ++ SW +++
Sbjct: 247 CPRGIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMM 306
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
++A+ +FSEM + P+ L AC G + L G Q+H IK
Sbjct: 307 QLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSAC-GSVCL--GRQIHCSAIKRDLM 363
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
+++ V NA+L+MY + + V ++ +N D VSW + I+A Q+ +E+ L +
Sbjct: 364 TDIRVSNALLSMYGRSGFVSELEAVLGKI-ENPDLVSWTAAISANFQNGFSEKAVALLLQ 422
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M + P+ F+ + +CA +A L QLHC K G F V N L+++Y KCG
Sbjct: 423 MHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGR 482
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+GSAR F+ M+ DV+SW+SLI G AQ G + AL+ F+ M S P+ T + VL
Sbjct: 483 IGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVG 542
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
C+H GLV+EG +R M + YG+ PT H +C++D+L R G EA I M + D++
Sbjct: 543 CNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVL 602
Query: 572 VWKSLLAS 579
+WK+LLAS
Sbjct: 603 IWKTLLAS 610
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 207/458 (45%), Gaps = 45/458 (9%)
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
+VH + + D + + ++ +Y +CGSL A F +M +VV +T++++ +N
Sbjct: 157 QVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNG 216
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+ A+ + QM + G+ P + T S++ C +G Q+H +++K + A
Sbjct: 217 ELARAVDVLCQMTRQGLQPNEHTMTSMLAECPR----GIGEQIHGYMLKVMGSQSVYAST 272
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
ALI Y+++ A+ VF + K+V SW SM+ + G +AL F+EM+ G Q
Sbjct: 273 ALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGV-Q 331
Query: 236 PNEFIFGSVFSAC-----------------------------SNFARILF--------NE 258
PNEF F SAC S + R F +
Sbjct: 332 PNEFAFSIALSACGSVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGK 391
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
I++PDL SW A I+ + + +A++L +M P+ S L +C L+QG
Sbjct: 392 IENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQG 451
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
Q+H +K+G D V NA++ MY+KC + +A L F + + D +SWNS+I Q
Sbjct: 452 RQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTH-DVMSWNSLIHGLAQ 510
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVF 437
H A FS M +S +PD TF V+ C + E T + GL
Sbjct: 511 HGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPS 570
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + G A ++ M PDV+ W +L+
Sbjct: 571 HYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLL 608
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 198/442 (44%), Gaps = 61/442 (13%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILL 63
VS+LC+ E A D T ++P+ T +++ C +G ++H ++L
Sbjct: 209 VSALCRNG---ELARAVDVLCQMTRQGLQPNEHTMTSMLAECPR----GIGEQIHGYMLK 261
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
V +++ Y + G A+ F+ + +NVVSW +M+ C ++ + +DA+++
Sbjct: 262 VMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRV 321
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ +M+ GV P +F F + AC GSVCLGRQ+H IK + + + NAL++MY +
Sbjct: 322 FSEMISEGVQPNEFAFSIALSAC---GSVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGR 378
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
+ + V I D+ SW + I+A + G+ +A+ +M H + PN++ F S
Sbjct: 379 SGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQM-HSEGFTPNDYAFSS 437
Query: 244 VFSACSNF----------------------------------------ARILFNEIDSPD 263
S+C++ AR+ F+ +D+ D
Sbjct: 438 GLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHD 497
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+ SWN+LI G+A H +AN A+ FSEM + PD T S+L C + +G
Sbjct: 498 VMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFR 557
Query: 324 YII-KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ- 381
+ + G ++ M + AL + + + D + W +++A+C H
Sbjct: 558 QMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRNL 617
Query: 382 ------AEELFRLFSRMLASQI 397
A++L L R AS +
Sbjct: 618 DIGKLAADKLMELSERDSASYV 639
>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 776
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 183/598 (30%), Positives = 291/598 (48%), Gaps = 62/598 (10%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCG---SLEDARMGFD 94
Y L+ +C++L + VH H+ + + L+N +L Y + G L AR+ D
Sbjct: 5 YLHLLRSCAALPHVA---AVHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARL-LD 60
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+MP+RN VS+ +I S+ ++ + + + +FT+ + + ACS V
Sbjct: 61 EMPRRNAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRT 120
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+ +HA V+ G+ L N++ +MY + + +AR VF +D SW ++++ + +
Sbjct: 121 GKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVR 180
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------- 251
G E L F+ M HG N F GS+ C++
Sbjct: 181 AGAREETLEVFSLMCRHG-LGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVV 239
Query: 252 --------------------------ARILFNEIDSPDLASWNALIAGVASHSNAN---E 282
A LF + P++ NA+IAG A+ E
Sbjct: 240 KAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVARE 299
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
A+ L+SE++ R + P + S+L AC G Q+H ++K F +V + +A++
Sbjct: 300 ALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALID 359
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
+Y+ + + F+ L K D V W S+I+ C+Q+ EE RLF + ++PD
Sbjct: 360 LYSGSGCMEDGYRCFRSLPKQ-DVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDVF 418
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
+ VM ACA +A Q+ C K+G + N + + + G + +A + F M
Sbjct: 419 AMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEM 478
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP-NLVTLVGVLTACSHVGLVEEG 521
E+ DVVSWS++I +A GC +AL +F M V+P N +T + +LTACSH GLV+EG
Sbjct: 479 ESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSHGGLVDEG 538
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
L Y IM +EYG+ PT +HC+CVVDLL RAG + +AE FI A D VVW+SLLAS
Sbjct: 539 LRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLAS 596
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 223/493 (45%), Gaps = 57/493 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TYA ++ACS ++ G+ VH ++L + L N + +MY +CG + +AR FD
Sbjct: 104 TYAAALAACSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAA 163
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC------SGLG 150
+R+ VSW A+++G + + ++++ M + G+ F GSIIK C + G
Sbjct: 164 EERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAG 223
Query: 151 SVCLGR---QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
V GR +H V+K+ + L +A+I MY K + +A +F + +V +
Sbjct: 224 DVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNA 283
Query: 208 MIAAFSK---LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARIL---- 255
MIA F + EAL ++E+ G QP+EF F S+ AC+ F + +
Sbjct: 284 MIAGFCREEAADVAREALGLYSELQSRG-MQPSEFSFSSILRACNLAGEFGFGKQIHGQV 342
Query: 256 -------------------------------FNEIDSPDLASWNALIAGVASHSNANEAM 284
F + D+ W ++I+G + EA+
Sbjct: 343 LKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEAL 402
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
LF E L PD + S++ AC G Q+ +K GF+ + N+ + M
Sbjct: 403 RLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMC 462
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI-KPDHIT 403
A+ + A F+E+ ++ D VSW+++I++ H A + +F+ ML +++ P+ IT
Sbjct: 463 ARSGDVDAATRRFQEM-ESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEIT 521
Query: 404 FNDVMGACAKMASLEMVTQLHCYIT-KTGLAFDVFVMNGLMDIYIKCGSLGSARKLF-NF 461
F ++ AC+ ++ + + + + GL+ + ++D+ + G L A +
Sbjct: 522 FLSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDS 581
Query: 462 MENPDVVSWSSLI 474
+ D V W SL+
Sbjct: 582 AFHDDAVVWRSLL 594
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 194/418 (46%), Gaps = 33/418 (7%)
Query: 3 NDYVSSLCKQ---NLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKV 57
N ++ C++ ++ EAL Y Q+ ++PS +++ ++ AC+ G+++
Sbjct: 282 NAMIAGFCREEAADVAREALGLYSELQSRG---MQPSEFSFSSILRACNLAGEFGFGKQI 338
Query: 58 HDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQE 117
H +L Q DV + + ++++Y G +ED F +P+++VV WT++I+GC QN
Sbjct: 339 HGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELF 398
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
+A++L+ + ++ G+ P F S++ AC+ L G Q+ +KS N+
Sbjct: 399 EEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSF 458
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
I M + + A F + +DV SW ++I++ + G +ALC FNEML PN
Sbjct: 459 IHMCARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPN 518
Query: 238 EFIFGSVFSACSN---------FARILFNEID-SPDLASWNALIAGVASHSNANEAMSLF 287
E F S+ +ACS+ + I+ +E SP + ++ + +A +
Sbjct: 519 EITFLSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAF- 577
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
+RD D + SLL +C + +G V I+ + S+ + MY
Sbjct: 578 --IRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADKIMDLEPTSSASYV-ILYNMYLDA 634
Query: 348 SVLCNALL---VFKELG-KNADSVSW-------NSIIAACLQHNQAEELFRLFSRMLA 394
L +A + KE G K +SW +S +A H +++ ++R + M++
Sbjct: 635 GELSSASKTRDLMKERGVKKEPGLSWIELSSGVHSFVAGDKSHPESKAIYRKVAEMVS 692
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 292/581 (50%), Gaps = 45/581 (7%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A L+ C+S++ L + I+ + + + Q +++++ K GSL +A F +
Sbjct: 81 AILLELCTSMKELH---QFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIED 137
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+ + M+ G ++N +DA+ + +M GV P + F ++K C + G+++
Sbjct: 138 KIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEI 197
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H +I + S++ A ++ MY K + +A +F + +D+ W ++I+ +++ G+
Sbjct: 198 HCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFG 257
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------------- 251
AL M G +P+ S+ A ++
Sbjct: 258 KTALELVLRMQEEGK-RPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTA 316
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
AR++F+ + + SWN++I G + + AM +F +M D ++
Sbjct: 317 LVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMT 376
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+TV L AC + QG VH + ++ S+V V N++++MY+KC + A +F+
Sbjct: 377 NVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFE 436
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
L ++ VSWN++I Q+ + E F +M IKPD T V+ A A+++ L
Sbjct: 437 NL-QHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLP 495
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
+H + +T L +VFV L+D+Y KCG++ +ARKLF+ M+ V +W+++I GY
Sbjct: 496 QAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYG 555
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
G G AL+LF +M+ + PN VT + VL+ACSH GLVEEG + M+ +YG+ P
Sbjct: 556 THGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAM 615
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H +VDLL RA ++EA DFI +M + I V+ ++L +
Sbjct: 616 DHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGA 656
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 201/427 (47%), Gaps = 42/427 (9%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP Y L+ C L+ G+++H ++++ +V ++NMY KC +E+A
Sbjct: 171 VRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAY 230
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+MP+R++V W +I+G +QN A++L ++M + G P T SI+ A + +G
Sbjct: 231 KMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVG 290
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
S+ +GR +H + +++ S + AL+ MY+K + AR +F + K V SW SMI
Sbjct: 291 SLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMID 350
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFG---------------------------- 242
+ + G A+ F +M+ N + G
Sbjct: 351 GYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGS 410
Query: 243 ---------SVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
S++S C + A +F + L SWNA+I G A + NEA+ F +M+
Sbjct: 411 DVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQ 470
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ + PD T+ S++ A L Q +H +I+ D NV V A++ MYAKC +
Sbjct: 471 LQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVH 530
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A +F ++ +WN++I H + LF +M IKP+ +TF V+ AC
Sbjct: 531 TARKLF-DMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSAC 589
Query: 412 AKMASLE 418
+ +E
Sbjct: 590 SHSGLVE 596
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 215/480 (44%), Gaps = 52/480 (10%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP T ++ A + + SL++GR +H + + + + V + +++MY KCGS+ AR+
Sbjct: 273 RPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARL 332
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD+M + VVSW +MI G QN A++++ +M+ V T + AC+ LG
Sbjct: 333 IFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGD 392
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
V GR +H + + E GS + N+LI+MY+K R+ A +F + K + SW +MI
Sbjct: 393 VEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILG 452
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
+++ G EA+ +F +M +P+ F SV A +
Sbjct: 453 YAQNGRINEAIDYFCKMQLQNI-KPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDK 511
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
AR LF+ +D + +WNA+I G +H A+ LF +M+
Sbjct: 512 NVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMK 571
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVL 350
+ P+ +T +L AC + +G Q + K G + + A++ + + + L
Sbjct: 572 KEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRL 631
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
A +++ + +++ AC H E + +R+ + PD ++ ++
Sbjct: 632 NEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIF--DLDPDDGGYHVLLAN 689
Query: 411 CAKMASL-EMVTQLHCYITKTGLAFD-----VFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
AS+ + V ++ + K G+ V + N + Y S A+K++ F+E
Sbjct: 690 IYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLET 749
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 93/185 (50%), Gaps = 4/185 (2%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
NI+ T +I A + L L + +H ++ + +V + +++MY KCG++ A
Sbjct: 473 NIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTA 532
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD M +R+V +W AMI G + A++L+ +M + + P + TF ++ ACS
Sbjct: 533 RKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHS 592
Query: 150 GSVCLGRQLHAHVIKSEHG--SHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWG 206
G V G Q +K ++G + A++ + + +R+ +A + + ++ +G
Sbjct: 593 GLVEEGFQYFGS-MKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFG 651
Query: 207 SMIAA 211
+M+ A
Sbjct: 652 AMLGA 656
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 184/590 (31%), Positives = 287/590 (48%), Gaps = 45/590 (7%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+++ T+ ++ CS + G +VH + DV + N +L +YG CG L DAR
Sbjct: 6 VQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDAR 65
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGL 149
FD+MP+R+VVSW +I S N +A Y M L+S + P + S++ + L
Sbjct: 66 RLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAAL 125
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
+ R++H + +K S + NAL+ Y K + VF+ K+ SW S+I
Sbjct: 126 EDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSII 185
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF------------------------ 245
+ G +AL F M+ GA QPN S+
Sbjct: 186 NGLACKGRCWDALNAFRMMIDAGA-QPNSVTISSILPVLVELECFKAGKEIHGFSMRMGT 244
Query: 246 ----------------SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
S S A +F+ +D ++ SWNA+IA A + EA+ +
Sbjct: 245 ETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQ 304
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M++ P+ +T ++L AC L G ++H+ +++G S++ V N+++ MYAKC
Sbjct: 305 MQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGC 364
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L +A VF K D VS+N +I + + + LFS M KPD ++F V+
Sbjct: 365 LHSARNVFNTSRK--DEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVIS 422
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
ACA +A+L+ ++H + L +FV N L+D Y KCG + A +LFN + DV S
Sbjct: 423 ACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVAS 482
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+++ILGY G + A+ +F MR V +LV+ + VL+ACSH GLVE G + M
Sbjct: 483 WNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEML 542
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + PT H +C+VDLL RAG V EA I Q+ D +W +LL +
Sbjct: 543 AQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGA 591
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 215/441 (48%), Gaps = 42/441 (9%)
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M++ GV TF ++K CS +C G ++H V K + + N L+ +Y
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV-- 244
+ DAR +F + +DV SW ++I S G EA ++ M+ +PN S+
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120
Query: 245 ------------------------------------FSACSNFARI--LFNEIDSPDLAS 266
+ C + + +FNE + S
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS 180
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WN++I G+A +A++ F M D P+ +T+ S+L + G ++H + +
Sbjct: 181 WNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSM 240
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+MG ++++ + N+++ MYAK A +F L + + VSWN++IA + E
Sbjct: 241 RMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRR-NIVSWNAMIANYALNRLPLEAI 299
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
R +M + P+ +TF +V+ ACA++ L ++H + GL D+FV N L+D+Y
Sbjct: 300 RFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMY 359
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KCG L SAR +FN D VS++ LI+GY++ ++L LF+ MR LG P++V+ V
Sbjct: 360 AKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFV 418
Query: 507 GVLTACSHVGLVEEGLHLYRI 527
GV++AC+++ +++G ++ +
Sbjct: 419 GVISACANLAALKQGKEVHGV 439
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 131/562 (23%), Positives = 230/562 (40%), Gaps = 78/562 (13%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
Y EA Y + + I+ + L+ ++L ++ R++H + + V N
Sbjct: 92 YTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCN 151
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
+++ YGKCGS++ F++ ++N VSW ++I G + + DA+ + M+ +G P
Sbjct: 152 ALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQP 211
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
T SI+ L G+++H ++ + + N+LI MY K +A +F
Sbjct: 212 NSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIF 271
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--- 251
+ R+++ SW +MIA ++ LEA+ +M G PN F +V AC+
Sbjct: 272 HNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGEC-PNAVTFTNVLPACARLGFL 330
Query: 252 -------------------------------------ARILFNEIDSPDLASWNALIAGV 274
AR +FN D S+N LI G
Sbjct: 331 GPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGY 389
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+ + ++++LFSEMR PD ++ ++ AC L QG +VH ++ S++
Sbjct: 390 SETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHL 449
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V N++L Y KC + A +F ++ D SWN++I + E +F M
Sbjct: 450 FVSNSLLDFYTKCGRIDIACRLFNQI-LFKDVASWNTMILGYGMIGELETAISMFEAMRD 508
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
++ D +++ V+ AC+ +E Q + L ++D+ + G +
Sbjct: 509 DTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEE 568
Query: 455 ARKLFNFME-NPDVVSWSSLI----------LG------------------------YAQ 479
A KL + PD W +L+ LG YA+
Sbjct: 569 AAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAE 628
Query: 480 FGCGDEALKLFTRMRSLGVSPN 501
G DEA K+ M+S G N
Sbjct: 629 TGRWDEANKIRELMKSRGAKKN 650
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 170/586 (29%), Positives = 285/586 (48%), Gaps = 48/586 (8%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
+ P + S C ++ +L ++H ++++ D+ ++++YG G L+ AR+
Sbjct: 3 LPPILHNFFYSLCDNINTLM---EMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLV 59
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FD +P + +SW +I N + D + Y +M F ++KACS +
Sbjct: 60 FDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNF 119
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
GR++H ++K + + L+ MY K I +R+VF ++V SW SMIA +
Sbjct: 120 DEGRKVHCQIVKFGNPDSFVF-TGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGY 178
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------- 251
+ + L FN M + N+ G + AC
Sbjct: 179 VQNNLAQDGLVLFNRM-REELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELG 237
Query: 252 -------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
AR +F+E+ D+ SW A+I G + EA+ LF +
Sbjct: 238 SYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQ 297
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+LP+ +T+ S+ +C L L G +H IK+G + V N+++ YAKC + +
Sbjct: 298 VAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSRDPI-VTNSLVDFYAKCQMNRD 356
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A VF+ + + D V+WNSII+A Q+ A E LF +M + PD +T V+ ACA
Sbjct: 357 ARYVFETI-SDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACA 415
Query: 413 KMASLEMVTQLHCYITKTGL-AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ +L++ + H Y K GL + +V+V L+ Y KCG SAR +F+ M+ V+WS
Sbjct: 416 SLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWS 475
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
++I GY G G +L +F M + PN +L+ACSH G++ EG L+ ++ +
Sbjct: 476 AMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQD 535
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
Y ++P+ +H +C+VDLLARAG + EA DFI +M D+ ++ + L
Sbjct: 536 YNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFL 581
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 178/333 (53%), Gaps = 11/333 (3%)
Query: 250 NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+ AR++F+ I PD SW +I +S + + ++ MR D + +L AC
Sbjct: 54 DLARLVFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKAC 113
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE-LGKNADSVS 368
+G +VH I+K G + + V ++ MYAKC + + VF E L +N S
Sbjct: 114 SESRNFDEGRKVHCQIVKFG-NPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNV--FS 170
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
W+S+IA +Q+N A++ LF+RM I+ + IT ++ AC K+ +L LH Y+
Sbjct: 171 WSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLI 230
Query: 429 KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
K G+ +++ L+D+Y KCG + AR +F+ + D+VSW+++I+GY Q GC +EALK
Sbjct: 231 KCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALK 290
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH--CSCVVD 546
LF + + V PN VT+ V ++CS + L+L R + + +R+ + +VD
Sbjct: 291 LFLQKEQVAVLPNDVTIASVFSSCSQL----LNLNLGRSIHGLSIKLGSRDPIVTNSLVD 346
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
A+ +A ++ + D D+V W S++++
Sbjct: 347 FYAKCQMNRDAR-YVFETISDRDVVAWNSIISA 378
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 147/304 (48%), Gaps = 23/304 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T A + S+CS L +L LGR +H + + D ++ N +++ Y KC DAR F+ +
Sbjct: 306 TIASVFSSCSQLLNLNLGRSIHG-LSIKLGSRDPIVTNSLVDFYAKCQMNRDARYVFETI 364
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+VV+W ++I+ SQN +A++L+ QM V+P T S++ AC+ L ++ +G
Sbjct: 365 SDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGS 424
Query: 157 QLHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
HA+ +K S++ AL+ Y K AR +F G+ +K +W +MI+ +
Sbjct: 425 SFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQ 484
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS-----PDLA 265
G +L F +ML +PNE IF S+ SACS+ I LF I P
Sbjct: 485 GNGRGSLSIFGDML-KAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPSTK 543
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC-------IGRLTLYQG 318
+ ++ +A EA+ +M + PD + L C +G L + +
Sbjct: 544 HYTCMVDLLARAGRLKEALDFIQKM---PVQPDVSLFGAFLHGCGLHSRFDLGELAIKRM 600
Query: 319 MQVH 322
+++H
Sbjct: 601 LELH 604
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
++ + ++H Y+ GL D+ L+ +Y G L AR +F+ + +PD +SW +I
Sbjct: 17 NINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIR 76
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGI 534
Y + + + RMR + V VL ACS +EG ++ +I+ ++G
Sbjct: 77 WYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIV--KFG- 133
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
P + +VD+ A+ G + + ++ D ++ W S++A
Sbjct: 134 NPDSFVFTGLVDMYAKCGEIECSRSVFDE-NLDRNVFSWSSMIA 176
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 170/583 (29%), Positives = 287/583 (49%), Gaps = 41/583 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV-LQNHILNMYGKCGSLEDARMGFD 94
+T A +I C +G ++ ++ S V + N +++M+G S+E+A F+
Sbjct: 351 NTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFN 410
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
M +R+ +SW ++I + N + +++ + M ++ T +++ AC +
Sbjct: 411 NMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKW 470
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
GR LH + KS S++ N+L++MY + DA VF + +D+ SW SM+A+ +
Sbjct: 471 GRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVE 530
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------------- 254
G A+ EML N F + SAC N ++
Sbjct: 531 DGKYSHAILLLVEMLKTRKAM-NYVTFTTALSACYNLEKLKIVHAFVIHFAVHHNLIIGN 589
Query: 255 ----------LFNE-------IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
L +E + D+ +WNALI G A + N + F+ MR LL
Sbjct: 590 TLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLS 649
Query: 298 DGLTVHSLLCACIG-RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
+ +T+ +LL C+ L GM +H++I+ GF+ + V ++++TMYA+C L + +
Sbjct: 650 NYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYI 709
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F L N +S +WN+I +A + EE + +RM + D +F+ + +
Sbjct: 710 FDVLA-NKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTV 768
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L+ QLH +I K G D +V+N MD+Y KCG + ++ + SW+ LI
Sbjct: 769 LDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISA 828
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
A+ G +A + F M LG+ P+ VT V +L+ACSH GLV+EGL + M +E+G+
Sbjct: 829 LARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPT 888
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EHC C++DLL R+G + EAE FI++M + VW+SLLA+
Sbjct: 889 AIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAA 931
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 142/532 (26%), Positives = 249/532 (46%), Gaps = 49/532 (9%)
Query: 22 YDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYG 81
+ F +N++N P L S + +G+ +H + Q + N ++NMY
Sbjct: 138 HTFIRNHSN----PQVSRFLQKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYS 193
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
K GS++ A+ FDKM RN SW MI+G + + A++ + M ++GV P + S
Sbjct: 194 KFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIAS 253
Query: 142 IIKACSGLGSVCLG-RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
++ AC G + G RQ+H +V+K S++ +L+ Y + +A +F I
Sbjct: 254 MVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEP 313
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHG-----------------------AYQ-- 235
++ SW S++ ++ G+ E L + + H+G YQ
Sbjct: 314 NIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQIL 373
Query: 236 ----------PNEFIFGSVFSACSNF-----ARILFNEIDSPDLASWNALIAGVASHSNA 280
+ + S+ S N+ A +FN + D SWN++I A +
Sbjct: 374 GDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRF 433
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
E++ F MR D +T+ +LL AC L G +H I K G +SNV VCN++
Sbjct: 434 EESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSL 493
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
L+MYA+ +A LVF + D +SWNS++A+ ++ + L ML ++ +
Sbjct: 494 LSMYAQAGSSEDAELVFHTMPAR-DLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMN 552
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
++TF + AC + L++V H ++ + ++ + N L+ +Y K G + A+K+
Sbjct: 553 YVTFTTALSACYNLEKLKIV---HAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCK 609
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
M DVV+W++LI G+A + ++ F MR G+ N +T+V +L C
Sbjct: 610 IMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTC 661
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/515 (25%), Positives = 241/515 (46%), Gaps = 49/515 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +++ + E+L + F T+ + T + L+ AC S + L+ GR +H I
Sbjct: 421 NSIITASAHNGRFEESL-GHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLIT 479
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S + +V + N +L+MY + GS EDA + F MP R+++SW +M+A ++ + + AI
Sbjct: 480 KSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAIL 539
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L ++ML++ TF + + AC L + + +HA VI +LI N L+ MY
Sbjct: 540 LLVEMLKTRKAMNYVTFTTALSACYNLEKL---KIVHAFVIHFAVHHNLIIGNTLVTMYG 596
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM-------------- 228
KF + +A+ V + +DV +W ++I + + FN M
Sbjct: 597 KFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVN 656
Query: 229 -----------LHHG----------AYQPNEFIFGSV---FSACS--NFARILFNEIDSP 262
L HG ++ + ++ S+ ++ C N + +F+ + +
Sbjct: 657 LLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANK 716
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT-LYQGMQV 321
+ ++WNA+ + A + EA+ + MR+ + D + S+ A IG LT L +G Q+
Sbjct: 717 NSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSF-SVALATIGNLTVLDEGQQL 775
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
HS+IIK+GF+ + V NA + MY KC + + + + K SWN +I+A +H
Sbjct: 776 HSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILP-IPKIRSKRSWNILISALARHGF 834
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVFVMN 440
+ F ML +KPDH+TF ++ AC+ + E + ++ G+ +
Sbjct: 835 FRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCV 894
Query: 441 GLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + G L A + M P+ W SL+
Sbjct: 895 CIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLL 929
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 185/429 (43%), Gaps = 46/429 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +SAC +L L++ VH ++ ++++ N ++ MYGK G +++A+ M
Sbjct: 555 TFTTALSACYNLEKLKI---VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIM 611
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL-G 155
P+R+VV+W A+I G + + N I+ + M + G++ T +++ C + G
Sbjct: 612 PERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHG 671
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+HAH++ + Q++LI MY + + + +F +A K+ ++W ++ +A +
Sbjct: 672 MPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHY 731
Query: 216 GYELEALCHFNEMLHHG----------------------------------AYQPNEFIF 241
G EAL M + G ++ +E++
Sbjct: 732 GPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVL 791
Query: 242 GSVFSACSNFARI--LFNEIDSPDLAS---WNALIAGVASHSNANEAMSLFSEMRDRELL 296
+ I +F + P + S WN LI+ +A H +A F EM D L
Sbjct: 792 NATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLK 851
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD +T SLL AC + +G+ S + + G + + C I+ + + L A
Sbjct: 852 PDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEG 911
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM--LASQIKPDHITFNDVMGACAK 413
++ + W S++AAC H E + R+ L S ++ +++V + +
Sbjct: 912 FIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQR 971
Query: 414 MASLEMVTQ 422
+E V +
Sbjct: 972 WGDVENVRK 980
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 123/269 (45%), Gaps = 15/269 (5%)
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G +H+ +K N N ++ MY+K + A VF ++ D+ SWN++I+ +
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDA-SWNNMISGFV 224
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDV 436
+ + + F M + + P ++ AC + + E Q+H Y+ K GL +V
Sbjct: 225 RVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNV 284
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
FV L+ Y GS+ A KLF +E P++VSW+SL++ YA G E L ++ +R
Sbjct: 285 FVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHN 344
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV------VDLLAR 550
G+ T+ V+ C G G Y+I+ + +I + S V + +
Sbjct: 345 GLICTGNTMATVIRTCGMFGDKTMG---YQILGD---VIKSGLDTSSVSVANSLISMFGN 398
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
V EA N M + D + W S++ +
Sbjct: 399 YDSVEEASRVFNNMQ-ERDTISWNSIITA 426
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 184/590 (31%), Positives = 287/590 (48%), Gaps = 45/590 (7%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+++ T+ ++ CS + G +VH + DV + N +L +YG CG L DAR
Sbjct: 155 VQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDAR 214
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGL 149
FD+MP+R+VVSW +I S N +A Y M L+S + P + S++ + L
Sbjct: 215 RLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAAL 274
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
+ R++H + +K S + NAL+ Y K + VF+ K+ SW S+I
Sbjct: 275 EDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSII 334
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF------------------------ 245
+ G +AL F M+ GA QPN S+
Sbjct: 335 NGLACKGRCWDALNAFRMMIDAGA-QPNSVTISSILPVLVELECFKAGKEIHGFSMRMGT 393
Query: 246 ----------------SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
S S A +F+ +D ++ SWNA+IA A + EA+ +
Sbjct: 394 ETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQ 453
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M++ P+ +T ++L AC L G ++H+ +++G S++ V N+++ MYAKC
Sbjct: 454 MQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGC 513
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L +A VF K D VS+N +I + + + LFS M KPD ++F V+
Sbjct: 514 LHSARNVFNTSRK--DEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVIS 571
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
ACA +A+L+ ++H + L +FV N L+D Y KCG + A +LFN + DV S
Sbjct: 572 ACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVAS 631
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+++ILGY G + A+ +F MR V +LV+ + VL+ACSH GLVE G + M
Sbjct: 632 WNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEML 691
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + PT H +C+VDLL RAG V EA I Q+ D +W +LL +
Sbjct: 692 AQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGA 740
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 214/501 (42%), Gaps = 44/501 (8%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
Y EA Y + + I+ + L+ ++L ++ R++H + + V N
Sbjct: 241 YTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCN 300
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
+++ YGKCGS++ F++ ++N VSW ++I G + + DA+ + M+ +G P
Sbjct: 301 ALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQP 360
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
T SI+ L G+++H ++ + + N+LI MY K +A +F
Sbjct: 361 NSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIF 420
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--- 251
+ R+++ SW +MIA ++ LEA+ +M G PN F +V AC+
Sbjct: 421 HNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGEC-PNAVTFTNVLPACARLGFL 479
Query: 252 -------------------------------------ARILFNEIDSPDLASWNALIAGV 274
AR +FN D S+N LI G
Sbjct: 480 GPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGY 538
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+ + ++++LFSEMR PD ++ ++ AC L QG +VH ++ S++
Sbjct: 539 SETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHL 598
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V N++L Y KC + A +F ++ D SWN++I + E +F M
Sbjct: 599 FVSNSLLDFYTKCGRIDIACRLFNQI-LFKDVASWNTMILGYGMIGELETAISMFEAMRD 657
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
++ D +++ V+ AC+ +E Q + L ++D+ + G +
Sbjct: 658 DTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEE 717
Query: 455 ARKLFNFME-NPDVVSWSSLI 474
A KL + PD W +L+
Sbjct: 718 AAKLIQQLPIAPDANIWGALL 738
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 167/359 (46%), Gaps = 25/359 (6%)
Query: 228 MLHHGAYQ-PNEF--IFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
+L++ +Q P F +F F C L+N + +WN G +
Sbjct: 97 ILNYAKFQHPGSFCSLFNQTFQNCR--TAFLWNTLIRAHSIAWNGTFDGFET-------- 146
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
++ M R + D T +L C + +GM+VH + K+GFD++V V N +L +Y
Sbjct: 147 --YNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLY 204
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIA-ACLQHNQAEELFRLFSRMLASQIKPDHIT 403
C L +A +F E+ + D VSWN+II + + E F +L S IKP+ ++
Sbjct: 205 GNCGFLNDARRLFDEMPER-DVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVS 263
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
++ A + EM ++HCY K GL V N L+D Y KCGS+ + ++FN
Sbjct: 264 VISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETV 323
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
+ VSW+S+I G A G +AL F M G PN VT+ +L + + G
Sbjct: 324 EKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKE 383
Query: 524 LYRI---MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++ M E I + ++D+ A++G EA + + +IV W +++A+
Sbjct: 384 IHGFSMRMGTETDIFIA----NSLIDMYAKSGHSTEASTIFHNLD-RRNIVSWNAMIAN 437
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 12/281 (4%)
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGF-DSNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
+LL C +L Q QVH+ I GF +V +C +++ YAK + +F + +
Sbjct: 59 NLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQ 118
Query: 363 NADSVS-WNSIIAA-CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
N + WN++I A + N + F ++RM+ ++ D TF V+ C+ +
Sbjct: 119 NCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKG 178
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
++H + K G DV+V N L+ +Y CG L AR+LF+ M DVVSW+++I +
Sbjct: 179 MEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVN 238
Query: 481 GCGDEALKLFTRM--RSLGVSPNLVTLVGVLTACSHVGLVE--EGLHLYRIMENEYGIIP 536
G EA + M RS+ + PNLV+++ +L + + E +H Y + + G+
Sbjct: 239 GDYTEARNYYFWMILRSV-IKPNLVSVISLLPISAALEDEEMTRRIHCYSV---KVGLDS 294
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
C+ +VD + G V N+ + + V W S++
Sbjct: 295 QVTTCNALVDAYGKCGSVKALWQVFNE-TVEKNEVSWNSII 334
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 175/579 (30%), Positives = 286/579 (49%), Gaps = 40/579 (6%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A +I +C L LG +V ++ S V + N +++M+G C S+E+A FD M +
Sbjct: 164 ATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKE 223
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
R+ +SW ++I N +++ + QM + T +++ C ++ GR L
Sbjct: 224 RDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGL 283
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H V+KS S++ N+L++MY++ + DA VF + +D+ SW SM+A+ G
Sbjct: 284 HGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNY 343
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------------ 254
AL EML N F + SAC N +
Sbjct: 344 PRALELLIEMLQ-TRKATNYVTFTTALSACYNLETLKIVHAFVILLGLHHNLIIGNALVT 402
Query: 255 LFNEIDS-----------PDL--ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
++ + S PD +WNALI G A + N A+ F+ +R+ + + +T
Sbjct: 403 MYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYIT 462
Query: 302 VHSLLCACIGRLTLY-QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
+ +LL A + L GM +H++I+ GF+ V ++++TMYA+C L + +F L
Sbjct: 463 IVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVL 522
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
N +S +WN+I++A + EE +L +M I D +F+ + L+
Sbjct: 523 A-NKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEG 581
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
QLH I K G + +V+N MD+Y KCG + ++ + SW+ LI A+
Sbjct: 582 QQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARH 641
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
G +A + F M LG+ P+ VT V +L+ACSH GLV+EGL + M ++G+ EH
Sbjct: 642 GFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEH 701
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
C C++DLL RAG + EAE+FIN+M +VW+SLLA+
Sbjct: 702 CVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAA 740
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/474 (27%), Positives = 229/474 (48%), Gaps = 46/474 (9%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MY K GS+E A+ FDKMP+RN SW +++G + A++ + ML+ GV P +
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 139 FGSIIKACSGLGSVCLGR-QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
S++ AC G + G Q+HAHVIK + +L+ Y F + + VF I
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------ 251
++ SW S++ ++ G E + + + G Y NE +V +C
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVY-CNENAMATVIRSCGVLVDKMLG 179
Query: 252 ----------------------------------ARILFNEIDSPDLASWNALIAGVASH 277
A +F+++ D SWN++I +
Sbjct: 180 YQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHN 239
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
+ +++ FS+MR D +T+ +LL C L G +H ++K G +SNV VC
Sbjct: 240 GHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVC 299
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
N++L+MY++ +A VF ++ + D +SWNS++A+ + + L ML ++
Sbjct: 300 NSLLSMYSQAGKSEDAEFVFHKM-RERDLISWNSMMASHVDNGNYPRALELLIEMLQTRK 358
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
+++TF + AC + +L++V H ++ GL ++ + N L+ +Y K GS+ +A++
Sbjct: 359 ATNYVTFTTALSACYNLETLKIV---HAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQR 415
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+ M + D V+W++LI G+A + A++ F +R GV N +T+V +L+A
Sbjct: 416 VCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSA 469
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/539 (25%), Positives = 257/539 (47%), Gaps = 47/539 (8%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGR-KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
+RPS+Y A L++AC + G +VH H++ DV + +L+ YG G + +
Sbjct: 54 VRPSSYVAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEV 113
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
M F ++ + N+VSWT+++ G + N + + +Y ++ + GV + ++I++C L
Sbjct: 114 DMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVL 173
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
LG Q+ VIKS + + N+LI+M+ D I +A VF + +D SW S+I
Sbjct: 174 VDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSII 233
Query: 210 AAFSKLGYELEALCHFNEMLH-----------------------------HG-----AYQ 235
A G+ ++L +F++M + HG +
Sbjct: 234 TASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLE 293
Query: 236 PNEFIFGSVFS-----ACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
N + S+ S S A +F+++ DL SWN+++A + N A+ L EM
Sbjct: 294 SNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEM 353
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ +T + L AC TL VH+++I +G N+ + NA++TMY K +
Sbjct: 354 LQTRKATNYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSM 410
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
A V K + + D V+WN++I + + F+ + + ++IT +++ A
Sbjct: 411 AAAQRVCK-IMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSA 469
Query: 411 CAKMAS-LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
L+ +H +I G + FV + L+ +Y +CG L ++ +F+ + N + +
Sbjct: 470 FLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSST 529
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
W++++ A +G G+EALKL +MR+ G+ + + ++ L++EG L+ ++
Sbjct: 530 WNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLI 588
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 147/523 (28%), Positives = 250/523 (47%), Gaps = 51/523 (9%)
Query: 24 FSQ-NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGK 82
FSQ T+ + T + L+ C S ++L+ GR +H ++ S + +V + N +L+MY +
Sbjct: 249 FSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQ 308
Query: 83 CGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI 142
G EDA F KM +R+++SW +M+A N A++L I+MLQ+ TF +
Sbjct: 309 AGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTA 368
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
+ AC L ++ + +HA VI +LI NAL+ MY KF + A+ V + +D
Sbjct: 369 LSACYNLETL---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDE 425
Query: 203 TSWGSMIA-------------AFSKLGYE------------LEALCHFNEMLHHG----- 232
+W ++I AF+ L E L A +++L HG
Sbjct: 426 VTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHA 485
Query: 233 -----AYQPNEFIFGSV---FSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANE 282
++ F+ S+ ++ C N + +F+ + + + ++WNA+++ A + E
Sbjct: 486 HIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEE 545
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY-QGMQVHSYIIKMGFDSNVPVCNAIL 341
A+ L +MR+ + D + S+ A IG LTL +G Q+HS IIK GF+SN V NA +
Sbjct: 546 ALKLIIKMRNDGIHLDQFSF-SVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATM 604
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
MY KC + + + + ++ SWN +I+A +H ++ F ML ++PDH
Sbjct: 605 DMYGKCGEIDDVFRILPQ-PRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDH 663
Query: 402 ITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
+TF ++ AC+ + E + TK G+ + ++D+ + G L A N
Sbjct: 664 VTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFIN 723
Query: 461 FMENP--DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
M P D+V W SL+ G + A K R+ L S +
Sbjct: 724 KMPVPPTDLV-WRSLLAACKIHGNLELARKAADRLFELDSSDD 765
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 165/340 (48%), Gaps = 9/340 (2%)
Query: 241 FGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
FGS+ A+ +F+++ + ASWN L++G +AM F M + + P
Sbjct: 5 FGSI-----EHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSY 59
Query: 301 TVHSLLCACIGRLTLYQG-MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
SL+ AC + +G QVH+++IK G +V V ++L Y + +VFKE
Sbjct: 60 VAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKE 119
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
+ + + VSW S++ + +E+ ++ R+ + + V+ +C + +
Sbjct: 120 I-EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKML 178
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
Q+ + K+GL V V N L+ ++ C S+ A +F+ M+ D +SW+S+I
Sbjct: 179 GYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVH 238
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTRE 539
G +++L+ F++MR + +T+ +L C + G L+ ++ G+
Sbjct: 239 NGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKS-GLESNVC 297
Query: 540 HCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
C+ ++ + ++AG +AE ++M + D++ W S++AS
Sbjct: 298 VCNSLLSMYSQAGKSEDAEFVFHKMR-ERDLISWNSMMAS 336
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 123/240 (51%), Gaps = 8/240 (3%)
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
MY+K + +A VF ++ + ++ SWN++++ ++ ++ + F ML ++P
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEA-SWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSY 59
Query: 403 TFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
++ AC + + E Q+H ++ K GLA DVFV L+ Y G + +F
Sbjct: 60 VAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKE 119
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
+E P++VSW+SL++GYA GC E + ++ R+R GV N + V+ +C G++ +
Sbjct: 120 IEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSC---GVLVDK 176
Query: 522 LHLYRIMEN--EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ Y+++ + + G+ T + ++ + + EA + M + D + W S++ +
Sbjct: 177 MLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMK-ERDTISWNSIITA 235
>gi|414585599|tpg|DAA36170.1| TPA: hypothetical protein ZEAMMB73_453858 [Zea mays]
Length = 829
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 178/597 (29%), Positives = 300/597 (50%), Gaps = 57/597 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILL-SKCQPDV-VLQNHILNMYGKC------GSLED 88
TY+ ++AC+ R L+LG+ VH H+L ++ PD VL+N +LN+Y C GS++
Sbjct: 138 TYSCALTACARTRRLRLGKSVHAHLLRRARSLPDTAVLRNSLLNVYASCVRYRGDGSVDV 197
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
R FD MP+RN VSW + + + +A++++++ML+ G+ P +F ++ A +
Sbjct: 198 VRRLFDAMPKRNAVSWNTLFGWYVKTGRPQEALEMFVRMLEDGIKPTPVSFVNVFPAVAK 257
Query: 149 LGSVCLGRQLHAHVIKS--EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
L+ ++K E+ + L ++ I M+++ + A VF A+K+ W
Sbjct: 258 -EDPSWSFVLYGLLVKHGMEYVNDLFVVSSAIVMFSELGDVQSAWRVFEYAAKKNTEVWN 316
Query: 207 SMIAAFSKLGYELEALC-------------------------------HFNEMLH----H 231
+MI + + G EA+ + LH
Sbjct: 317 TMITGYVQNGKFAEAMGLVIRLMVSKEVPLDVVTFLSALTAASQSQDGRLGQQLHGYLIK 376
Query: 232 GAYQPNEFIFGS----VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
G + I G+ ++S C N A LF+ + D+ SWN +I + E +
Sbjct: 377 GMHTTLPVILGNALVVMYSRCGNVQTAFELFDRLHEKDIVSWNTMITAFVQNDFDLEGLL 436
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
L +M+ D +T+ ++L A L+ G Q HSY+I+ G + + + ++ MYA
Sbjct: 437 LVYQMQKSGFAADLVTLTAVLSAASNTGDLHIGKQAHSYLIRHGIEGE-GLESYLIDMYA 495
Query: 346 KCSVLCNALLVFKELGK-NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
K + A VF + G D V+WN++IA Q E+ F M+ + ++P +T
Sbjct: 496 KSGRIEIAQRVFDDYGNAKRDEVTWNAMIAGYTQTGHPEQAILAFRAMIEACLEPTSVTL 555
Query: 405 NDVMGACAKMAS-LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
V+ AC + L Q+HC+ + L +VFV L+D+Y KCG + +A +F M
Sbjct: 556 ASVLPACDPLGGGLCAGKQIHCFALRRCLDTNVFVGTALVDMYSKCGEISTAEHVFADMT 615
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
VS++++I G Q G G AL LF M+ G+ P+ VT + ++AC++ GLV+EGL
Sbjct: 616 EKSTVSYTTMISGLGQHGFGKSALSLFYSMQEKGLKPDGVTFLAAISACNYSGLVDEGLA 675
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV-VWKSLLAS 579
LYR ME +G++ T +H C+VD+LA+AG V EA +F+ ++ + D V +W +LLAS
Sbjct: 676 LYRSMET-FGVVVTPQHRCCIVDMLAKAGRVEEAYEFVQELGEEGDFVSIWGTLLAS 731
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 208/459 (45%), Gaps = 71/459 (15%)
Query: 120 AIKLYIQMLQSGVMP----GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG--SHLIA 173
A++LY +L P +T+ + AC+ + LG+ +HAH+++ +
Sbjct: 117 ALRLY-ALLNHAARPTPRSDHYTYSCALTACARTRRLRLGKSVHAHLLRRARSLPDTAVL 175
Query: 174 QNALIAMYT-----KFDRILDA-RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
+N+L+ +Y + D +D R +F + +++ SW ++ + K G EAL F
Sbjct: 176 RNSLLNVYASCVRYRGDGSVDVVRRLFDAMPKRNAVSWNTLFGWYVKTGRPQEALEMFVR 235
Query: 228 MLHHGAYQPNEFIFGSVFSACS----------------------------NFARILFNEI 259
ML G +P F +VF A + + A ++F+E+
Sbjct: 236 MLEDG-IKPTPVSFVNVFPAVAKEDPSWSFVLYGLLVKHGMEYVNDLFVVSSAIVMFSEL 294
Query: 260 D-------------SPDLASWNALIAGVASHSNANEAMSLFSE-MRDRELLPDGLTVHSL 305
+ WN +I G + EAM L M +E+ D +T S
Sbjct: 295 GDVQSAWRVFEYAAKKNTEVWNTMITGYVQNGKFAEAMGLVIRLMVSKEVPLDVVTFLSA 354
Query: 306 LCACI----GRLTLYQGMQVHSYIIKMGFDSNVPVC--NAILTMYAKCSVLCNALLVFKE 359
L A GRL G Q+H Y+IK G + +PV NA++ MY++C + A +F
Sbjct: 355 LTAASQSQDGRL----GQQLHGYLIK-GMHTTLPVILGNALVVMYSRCGNVQTAFELFDR 409
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
L + D VSWN++I A +Q++ E L +M S D +T V+ A + L +
Sbjct: 410 LHEK-DIVSWNTMITAFVQNDFDLEGLLLVYQMQKSGFAADLVTLTAVLSAASNTGDLHI 468
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP--DVVSWSSLILGY 477
Q H Y+ + G+ + + + L+D+Y K G + A+++F+ N D V+W+++I GY
Sbjct: 469 GKQAHSYLIRHGIEGE-GLESYLIDMYAKSGRIEIAQRVFDDYGNAKRDEVTWNAMIAGY 527
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
Q G ++A+ F M + P VTL VL AC +G
Sbjct: 528 TQTGHPEQAILAFRAMIEACLEPTSVTLASVLPACDPLG 566
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 194/416 (46%), Gaps = 51/416 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHIL--LSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
T+ ++A S + +LG+++H +++ + P V+L N ++ MY +CG+++ A FD
Sbjct: 350 TFLSALTAASQSQDGRLGQQLHGYLIKGMHTTLP-VILGNALVVMYSRCGNVQTAFELFD 408
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
++ ++++VSW MI QN + + + L QM +SG T +++ A S G + +
Sbjct: 409 RLHEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQKSGFAADLVTLTAVLSAASNTGDLHI 468
Query: 155 GRQLHAHVIKSEHGSHLIA-QNALIAMYTKFDRILDARNVFS--GIARKDVTSWGSMIAA 211
G+Q H+++I+ HG ++ LI MY K RI A+ VF G A++D +W +MIA
Sbjct: 469 GKQAHSYLIR--HGIEGEGLESYLIDMYAKSGRIEIAQRVFDDYGNAKRDEVTWNAMIAG 526
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
+++ G+ +A+ F M+ +P SV AC
Sbjct: 527 YTQTGHPEQAILAFRAMIE-ACLEPTSVTLASVLPACDPLGGGLCAGKQIHCFALRRCLD 585
Query: 252 ---------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
A +F ++ S+ +I+G+ H A+SLF M
Sbjct: 586 TNVFVGTALVDMYSKCGEISTAEHVFADMTEKSTVSYTTMISGLGQHGFGKSALSLFYSM 645
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+++ L PDG+T + + AC + +G+ ++ + G I+ M AK +
Sbjct: 646 QEKGLKPDGVTFLAAISACNYSGLVDEGLALYRSMETFGVVVTPQHRCCIVDMLAKAGRV 705
Query: 351 CNALLVFKELGKNADSVS-WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
A +ELG+ D VS W +++A+C ++ E + + R++ + K H ++
Sbjct: 706 EEAYEFVQELGEEGDFVSIWGTLLASCKAQDKQELVNLVTERLICIEKKYGHAGYS 761
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 13/157 (8%)
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKP----DHITFNDVMGACAKMASLEMVTQLH 424
+N+++ A + E RL++ +L +P DH T++ + ACA+ L + +H
Sbjct: 101 YNALLIAYVARALPEHALRLYA-LLNHAARPTPRSDHYTYSCALTACARTRRLRLGKSVH 159
Query: 425 CYITKTGLAF-DVFVM-NGLMDIYIKC------GSLGSARKLFNFMENPDVVSWSSLILG 476
++ + + D V+ N L+++Y C GS+ R+LF+ M + VSW++L
Sbjct: 160 AHLLRRARSLPDTAVLRNSLLNVYASCVRYRGDGSVDVVRRLFDAMPKRNAVSWNTLFGW 219
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
Y + G EAL++F RM G+ P V+ V V A +
Sbjct: 220 YVKTGRPQEALEMFVRMLEDGIKPTPVSFVNVFPAVA 256
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 163/614 (26%), Positives = 294/614 (47%), Gaps = 67/614 (10%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + L EAL Y + + P + ++S+C+ GR VH
Sbjct: 115 LSGYAQNGLGEEALWLYR-QMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQG 173
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ + N ++ +Y +CGS A F MP R+ V++ +I+G +Q A++++
Sbjct: 174 FCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFE 233
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M SG+ P T S++ AC+ LG + G QLH+++ K+ S I + +L+ +Y K
Sbjct: 234 EMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCG 293
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A +F+ R +V W ++ AF ++ ++ F +M G +PN+F + +
Sbjct: 294 DVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAG-IRPNQFTYPCIL 352
Query: 246 SACS----------------------------------------NFARILFNEIDSPDLA 265
C+ AR + + D+
Sbjct: 353 RTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW ++IAG H +A++ F EM+ + PD + + S + C G + QG+Q+H+ +
Sbjct: 413 SWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARV 472
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
G+ +V + NA++ +YA+C + A F+E+ ++ D ++WN +++ Q EE
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEI-EHKDEITWNGLVSGFAQSGLHEEA 531
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
++F RM S +K + TF + A A +A ++ Q+H + KTG +F+ V N L+ +
Sbjct: 532 LKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISL 591
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y KCGS A+ F+ M + VSW+++I +Q G G EAL F +M+
Sbjct: 592 YGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMK----------- 640
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
+EGL ++ M ++YGI P +H +CV+D+ RAG + A+ F+ +M
Sbjct: 641 -------------KEGLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMP 687
Query: 566 CDADIVVWKSLLAS 579
AD +VW++LL++
Sbjct: 688 IAADAMVWRTLLSA 701
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 153/589 (25%), Positives = 284/589 (48%), Gaps = 51/589 (8%)
Query: 35 PSTYAGLISAC-SSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
P +A + AC + R Q+ ++H + D ++ N ++++Y K G + AR F
Sbjct: 41 PLDFACALRACRGNGRRWQVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVF 100
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
+++ R+ VSW AM++G +QN +A+ LY QM ++GV+P + S++ +C+
Sbjct: 101 EELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFA 160
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
GR +HA K S NALI +Y + A VF + +D ++ ++I+ +
Sbjct: 161 QGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHA 220
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------- 251
+ + AL F EM G P+ S+ +AC++
Sbjct: 221 QCAHGEHALEIFEEMQSSG-LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDY 279
Query: 252 ------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
A ++FN + ++ WN ++ ++ ++ LF +M+
Sbjct: 280 IMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTA 339
Query: 294 ELLPDGLTVHSLL--CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ P+ T +L C C G + L G Q+HS +K GF+S++ V ++ MY+K L
Sbjct: 340 GIRPNQFTYPCILRTCTCTGEIDL--GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLE 397
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A V E+ K D VSW S+IA +QH ++ F M I PD+I + C
Sbjct: 398 KARRVL-EMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGC 456
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
A + ++ Q+H + +G + DV + N L+++Y +CG + A F +E+ D ++W+
Sbjct: 457 AGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWN 516
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMEN 530
L+ G+AQ G +EALK+F RM GV N+ T V L+A +++ +++G ++ R+++
Sbjct: 517 GLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT 576
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ E + ++ L + G +A+ ++M+ + + V W +++ S
Sbjct: 577 GHSF--ETEVGNALISLYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITS 622
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 174/372 (46%), Gaps = 24/372 (6%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IRP+ TY ++ C+ + LG ++H + + + D+ + +++MY K G LE AR
Sbjct: 341 IRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR 400
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ + +++VVSWT+MIAG Q+ DA+ + +M + G+ P S I C+G+
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIK 460
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G Q+HA V S + + NAL+ +Y + RI +A + F I KD +W +++
Sbjct: 461 AMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVS 520
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------LFNEIDS 261
F++ G EAL F M G + N F F S SA +N A I + S
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGV-KHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHS 579
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR----LTLYQ 317
+ NALI+ + +A FSEM +R + + S C+ GR L +
Sbjct: 580 FETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITS--CSQHGRGLEALDFFD 637
Query: 318 GMQVH--SYIIKM----GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
M+ SY M G ++ ++ + L A +E+ AD++ W +
Sbjct: 638 QMKKEGLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRT 697
Query: 372 IIAACLQHNQAE 383
+++AC H E
Sbjct: 698 LLSACKVHKNIE 709
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 161/319 (50%), Gaps = 10/319 (3%)
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCA---CIGRLTLYQGM-Q 320
AS +AG + + + +SLF+ D+ GL CA C G +Q + +
Sbjct: 7 ASLGWSLAGFLAQEDPAKVLSLFA---DKARQHGGLGPLDFACALRACRGNGRRWQVVPE 63
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H+ I G + V N ++ +Y+K ++ A VF+EL D+VSW ++++ Q+
Sbjct: 64 IHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSAR-DNVSWVAMLSGYAQNG 122
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
EE L+ +M + + P + V+ +C K +H K G + FV N
Sbjct: 123 LGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGN 182
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+ +Y++CGS A ++F M + D V++++LI G+AQ G+ AL++F M+S G+SP
Sbjct: 183 ALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSP 242
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ VT+ +L AC+ +G +++G L+ + + G+ ++DL + G V A
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYL-FKAGMSSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 561 INQMACDADIVVWKSLLAS 579
N + ++V+W +L +
Sbjct: 302 FN-LGNRTNVVLWNLILVA 319
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 181/605 (29%), Positives = 293/605 (48%), Gaps = 68/605 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++ +IS L+ RK+ D + + +V N ++ Y C + +AR FD+M
Sbjct: 266 SWNAMISGYVQNGDLKNARKLFDEM----PEKNVASWNSVVTGYCHCYRMSEARELFDQM 321
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+RN VSW MI+G +A ++++M ++ P Q F ++ A +GL + L
Sbjct: 322 PERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIG 381
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
L IK+ + ++ +A++ YT+ + A + F + ++ SW +MIAAF++ G
Sbjct: 382 SLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCG 441
Query: 217 --------YEL-----------------------EALCHFNEMLHHGAYQPNEFIFGSVF 245
YE +A F+E+L+ N I G
Sbjct: 442 RLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQ 501
Query: 246 SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
+ A+ LF ++ + ASW A+IAG + + EA+ L E+ +P + S
Sbjct: 502 NGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSA 561
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS----------------- 348
L AC + G +HS IK G N V N +++MYAKC
Sbjct: 562 LSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDT 621
Query: 349 --------------VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
+L +A +VF+++ K D VSW +II+A +Q E LF MLA
Sbjct: 622 VSWNSLISGLSENYMLDDARVVFEKMPKR-DVVSWTAIISAYVQAGHGEVALDLFLDMLA 680
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
IKP+ +T ++ AC + ++++ Q H I K G +FV N L+ +Y KCG
Sbjct: 681 RGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YED 739
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
+F M D+++W+++++G AQ G G EA+K+F +M G+ P+ ++ +GVL ACSH
Sbjct: 740 GFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSH 799
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
GLV+EG + M +YGI+P H +C+VDLL RAG + EAE I M D V+W+
Sbjct: 800 AGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWE 859
Query: 575 SLLAS 579
+LL +
Sbjct: 860 ALLGA 864
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 225/441 (51%), Gaps = 39/441 (8%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T +++A + + +Q R + D IL P+VV N I+ Y + G L++A+ F K
Sbjct: 459 ATKTAMMTAYAQVGRIQKARLIFDEIL----NPNVVAWNAIIAGYTQNGMLKEAKDLFQK 514
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP +N SW AMIAG QN + +A++L I++ +SG +P +F S + AC+ +G V +G
Sbjct: 515 MPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIG 574
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R +H+ IK+ + N LI+MY K + D +VF I KD SW S+I+ S+
Sbjct: 575 RVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSE- 633
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVA 275
N ML + AR++F ++ D+ SW A+I+
Sbjct: 634 ----------NYML--------------------DDARVVFEKMPKRDVVSWTAIISAYV 663
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
+ A+ LF +M R + P+ LTV SLL AC + G Q H+ I K+GFD+ +
Sbjct: 664 QAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLF 723
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
V N+++TMY KC + VF+E+ ++ D ++WN+++ C Q+ +E ++F +M
Sbjct: 724 VGNSLITMYFKCGYE-DGFCVFEEMPEH-DLITWNAVLVGCAQNGLGKEAIKIFEQMEVE 781
Query: 396 QIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
I PD ++F V+ AC+ + E + K G+ V+ ++D+ + G L
Sbjct: 782 GILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSE 841
Query: 455 ARKLFNFME-NPDVVSWSSLI 474
A L M PD V W +L+
Sbjct: 842 AEALIENMPVKPDSVIWEALL 862
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 226/493 (45%), Gaps = 58/493 (11%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
+L Y K G +E+AR F+ M +RNVVSW AMI+G QN +A KL+ +M + V
Sbjct: 239 LLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVA-- 296
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF- 194
++ S++ + R+L + + S ++ +I+ Y +A +VF
Sbjct: 297 --SWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMV----MISGYVHISDYWEAWDVFV 350
Query: 195 ---SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-- 249
+AR D + + +++A + L +LE + + Y+ + + ++ +A +
Sbjct: 351 KMCRTVARPDQSIFVVVLSAITGLD-DLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRN 409
Query: 250 ---NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
+ A F + + SW +IA A ++A+ L+ + ++ + T
Sbjct: 410 GSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATK--TAMMTA 467
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
A +GR+ Q I + NV NAI+ Y + +L A +F+++ +S
Sbjct: 468 YAQVGRI------QKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVK-NS 520
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
SW ++IA +Q+ ++ E L + S P +F + ACA + +E+ +H
Sbjct: 521 ASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSL 580
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGS-------------------------------LGSA 455
KTG F+ +VMNGL+ +Y KCG+ L A
Sbjct: 581 AIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDA 640
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
R +F M DVVSW+++I Y Q G G+ AL LF M + G+ PN +T+ +L+AC ++
Sbjct: 641 RVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNL 700
Query: 516 GLVEEGLHLYRIM 528
G ++ G + ++
Sbjct: 701 GAIKLGEQFHALI 713
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 195/447 (43%), Gaps = 60/447 (13%)
Query: 81 GKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFG 140
G+ G +E+AR F++M QR+VVSW +MI G SQN + ++A L+
Sbjct: 182 GRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF---------------- 225
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
+G+ + I L+ Y K RI +AR VF + +
Sbjct: 226 ----------DAFVGKNIRTWTI-------------LLTGYAKEGRIEEAREVFESMTER 262
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEID 260
+V SW +MI+ + + G A F+EM N + G + AR LF+++
Sbjct: 263 NVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMP 322
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ SW +I+G S+ EA +F +M PD +L A G L
Sbjct: 323 ERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGS 382
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+ IK G++ +V V +AIL Y + L A+ F+ + + + SW ++IAA Q
Sbjct: 383 LRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPER-NEYSWTTMIAAFAQCG 441
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD----- 435
+ ++ +L+ R+ + T +M A A++ I K L FD
Sbjct: 442 RLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGR----------IQKARLIFDEILNP 487
Query: 436 -VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
V N ++ Y + G L A+ LF M + SW+++I G+ Q EAL+L +
Sbjct: 488 NVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELH 547
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEG 521
G P+ + L+AC+++G VE G
Sbjct: 548 RSGSVPSDSSFTSALSACANIGDVEIG 574
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 180/415 (43%), Gaps = 50/415 (12%)
Query: 164 KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALC 223
K +HL N I + R+ +AR VF+ + ++DV SW SMI +S+ G EA
Sbjct: 164 KETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARL 223
Query: 224 HFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEA 283
F+ + + G AR +F + ++ SWNA+I+G + + A
Sbjct: 224 LFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNA 283
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
LF EM ++ NV N+++T
Sbjct: 284 RKLFDEMPEK---------------------------------------NVASWNSVVTG 304
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
Y C + A +F ++ + +SVSW +I+ + + E + +F +M + +PD
Sbjct: 305 YCHCYRMSEARELFDQMPER-NSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSI 363
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
F V+ A + LE++ L KTG DV V + +++ Y + GSL A F M
Sbjct: 364 FVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMP 423
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
+ SW+++I +AQ G D+A++L+ R+ V+ T ++TA + VG +++
Sbjct: 424 ERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGRIQKARL 479
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++ + N P + ++ + G + EA+D +M + W +++A
Sbjct: 480 IFDEILN-----PNVVAWNAIIAGYTQNGMLKEAKDLFQKMPV-KNSASWAAMIA 528
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 168/544 (30%), Positives = 275/544 (50%), Gaps = 43/544 (7%)
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
L+ Y + G +++A F+ M Q + W MI G N DA+ Y +M GV
Sbjct: 67 LSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDN 126
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG 196
FT+ +IKAC GL + G ++H VIKS + N+LI MY K I A VF
Sbjct: 127 FTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFRE 186
Query: 197 IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------- 249
+ +D+ SW SMI+ + +G +L F EM G + + F + ACS
Sbjct: 187 MPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGI-KLDRFSVIGILGACSLEGFLRN 245
Query: 250 ---------------------------------NFARILFNEIDSPDLASWNALIAGVAS 276
++A LF++I + +WNA+I G +
Sbjct: 246 GKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSL 305
Query: 277 HSNANEAMSLFSEMRDR-ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
++ + E+ + +M++ +L PD +T+ +LL C + G VH + I+ GF ++
Sbjct: 306 NAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLV 365
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
+ A++ MY +C L A +F ++ + + +SWN++IA+ ++ + + LF +
Sbjct: 366 LETALVDMYGECGKLKPAECLFGQMNER-NLISWNAMIASYTKNGENRKAMTLFQDLCNK 424
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA 455
+KPD T ++ A A++ASL Q+H Y+TK L + FV N ++ +Y KCG+L A
Sbjct: 425 TLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRA 484
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
R++F+ M DV+SW+++I+ YA G G +++LF+ MR G PN T V +L +CS
Sbjct: 485 REIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVA 544
Query: 516 GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
GLV EG + M+ +Y I P EH C++DL+ R G + A++FI +M +W S
Sbjct: 545 GLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGS 604
Query: 576 LLAS 579
LL +
Sbjct: 605 LLTA 608
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 219/486 (45%), Gaps = 55/486 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY +I AC L L G +VH ++ S D+ + N ++ MY K G +E A M F +M
Sbjct: 128 TYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREM 187
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P R++VSW +MI+G ++ + +M SG+ +F+ I+ ACS G + G+
Sbjct: 188 PVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGK 247
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H +++S ++ Q +L+ MY K R+ A +F I K + +W +MI +S
Sbjct: 248 EIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNA 307
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
E+ + +M G P+ ++ C+ I
Sbjct: 308 QSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLE 367
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
LF +++ +L SWNA+IA + +AM+LF ++ ++ L
Sbjct: 368 TALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLK 427
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD T+ S+L A +L + Q+H Y+ K+ DSN V N+I+ MY KC L A +
Sbjct: 428 PDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREI 487
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + D +SWN++I A H LFS M +P+ TF ++ +C+
Sbjct: 488 FDRM-TFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAG- 545
Query: 417 LEMVTQLHCYITKTGLAFDVFV----MNGLMDIYIKCGSLGSARKLFNFMEN----PDVV 468
+V + Y +++ ++D+ + G+L A+ NF+E P
Sbjct: 546 --LVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAK---NFIEEMPLAPTAR 600
Query: 469 SWSSLI 474
W SL+
Sbjct: 601 IWGSLL 606
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 190/400 (47%), Gaps = 49/400 (12%)
Query: 29 TNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
+ I++ + G++ ACS L+ G+++H ++ S+ + DV++Q +++MY KCG ++
Sbjct: 221 SGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDY 280
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG--VMPGQFTFGSIIKAC 146
A FD++ +++V+W AMI G S N Q ++ Y++ +Q G + P T +++ C
Sbjct: 281 AERLFDQITDKSIVAWNAMIGGYSLNAQSFESFA-YVRKMQEGGKLHPDWITMINLLPPC 339
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
+ L ++ LG+ +H I++ HL+ + AL+ MY + ++ A +F + +++ SW
Sbjct: 340 AQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWN 399
Query: 207 SMIAAFSKLGYELEALCHFNEMLH-----------------------------HG----- 232
+MIA+++K G +A+ F ++ + HG
Sbjct: 400 AMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKL 459
Query: 233 AYQPNEFIFGSV---FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
N F+ S+ + C N AR +F+ + D+ SWN +I A H ++ LF
Sbjct: 460 KLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELF 519
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV----CNAILTM 343
SEMR++ P+G T SLL +C + +G + Y M D N+ IL +
Sbjct: 520 SEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWE---YFNSMKRDYNINPGIEHYGCILDL 576
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ L +A +E+ + W S++ A E
Sbjct: 577 IGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVE 616
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 5/155 (3%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRP--STYAGLISACSSLRSLQLGRKVHDH 60
N ++S K +A+ + Q+ N ++P +T A ++ A + L SL+ ++H +
Sbjct: 399 NAMIASYTKNGENRKAMTLF---QDLCNKTLKPDATTIASILPAYAELASLREAEQIHGY 455
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ K + + N I+ MYGKCG+L AR FD+M ++V+SW +I + + +
Sbjct: 456 VTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRIS 515
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
I+L+ +M + G P TF S++ +CS G V G
Sbjct: 516 IELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEG 550
>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 670
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 176/607 (28%), Positives = 298/607 (49%), Gaps = 55/607 (9%)
Query: 22 YDFSQNNTNIRIRPSTYAGL--ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNM 79
Y + + NT R R + L + AC+S +L ++H ++ + D + ++ +
Sbjct: 3 YLYFRPNTTSRARACRDSLLAHLDACASRANLA---ELHGRLVRAHLGSDPCVAGRLVTL 59
Query: 80 YGKCGSLED---ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
S D AR FD+M Q + W MI G + + DA++L+ M +SGV P
Sbjct: 60 LASPVSRHDMPYARKVFDRMAQPTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDN 119
Query: 137 FTFGSIIKACSGLGS---VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
+T ++ ++ + S G +HA V + S L + LI Y + DAR V
Sbjct: 120 YTMAAVAQSSAAFASWKGRATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKV 179
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN--- 250
F + +DV SW MI+AF++ G L +EM G +PN+ S+ SAC
Sbjct: 180 FEEMHERDVVSWTLMISAFAQCGQWDNVLRSLDEMQSEGT-KPNKITIISLLSACGQVRA 238
Query: 251 -------FARI------------------------------LFNEIDSPDLASWNALIAG 273
+AR+ F + + SWN LI G
Sbjct: 239 VDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDG 298
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
+ EA+++F EM ++PD +T+ S+L L QG +H+YI +
Sbjct: 299 FVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCD 358
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
+ + N+++ MYAKC + A ++F+ + + D VSW +++ ++ Q F LF M
Sbjct: 359 IILQNSLINMYAKCGDMAAAEIIFENMARR-DIVSWTAMVCGYVKGLQFRTAFNLFDDMK 417
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
+ + ++ AC+++ +L+ ++H YI + + D+++ + L+D+Y KCG +
Sbjct: 418 VRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCID 477
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL-GVSPNLVTLVGVLTAC 512
+A ++F+ M + ++W+++I G A G G EA+ LF ++ L P+ +TL VL AC
Sbjct: 478 AAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCAC 537
Query: 513 SHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
+HVG+V+EGLH + +M GI+P EH C+VDLL RAG + EA +FI +M + V+
Sbjct: 538 THVGMVDEGLHYFNLMLT-LGIVPDNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVI 596
Query: 573 WKSLLAS 579
W SLLA+
Sbjct: 597 WGSLLAA 603
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 161/338 (47%), Gaps = 17/338 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N + + + EAL ++ ++ I P T ++S + L LQ GR +H++
Sbjct: 293 NTLIDGFVQNGKHKEALTMFEEMLSDGVI---PDVITLVSVLSTYAQLGDLQQGRYLHNY 349
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
I + D++LQN ++NMY KCG + A + F+ M +R++VSWTAM+ G + Q A
Sbjct: 350 IKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTA 409
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
L+ M VM + S++ ACS LG++ GR++H+++ + + + ++AL+ M
Sbjct: 410 FNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDM 469
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K I A +FS + K +W +MI + G EA+ F ++L +P+
Sbjct: 470 YAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAIT 529
Query: 241 FGSVFSACSNFARI-----LFNEIDS----PDLASWNALIAGVASHSNANEAMSLFSEMR 291
V AC++ + FN + + PD + ++ + +EA + +M
Sbjct: 530 LKVVLCACTHVGMVDEGLHYFNLMLTLGIVPDNEHYGCIVDLLGRAGLLDEAYNFIQKM- 588
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
+ P+ + SLL AC + G + +II +
Sbjct: 589 --PIQPNPVIWGSLLAACRVHHRMELGKIIGQHIIDLA 624
>gi|297800128|ref|XP_002867948.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313784|gb|EFH44207.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 919
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 178/578 (30%), Positives = 296/578 (51%), Gaps = 44/578 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPD--VVLQNHILNMYGKCGSLEDARMGFD 94
T++ +ISACS L L LG +H ++ S P+ V + N I++MY KCG +E A F+
Sbjct: 281 TFSCVISACSCLEELPLGESLHGLVIKSGYSPEAHVSVANSIISMYSKCGDIEAAETVFE 340
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVC 153
++ ++V+SW A++ G S N +A + +M + P T SI C G C
Sbjct: 341 ELLCKDVISWNAILNGLSANGMFEEAFGILKEMQSVDKIQPDISTVVSITSIC---GDFC 397
Query: 154 L---GRQLHAHVIKSEHGSH-LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
L GR +H + ++ E S L N++I MY K A +F +D+ SW SMI
Sbjct: 398 LSREGRAIHGYTVRREMQSRALEVINSVIDMYGKCGLTTQAEFLFKTTTHRDLVSWNSMI 457
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF---SACSNFARILFNE-------- 258
+AF++ G+ EA F E++ Y ++F +V ++C + ++F +
Sbjct: 458 SAFAQNGFTQEAKNLFREVVSE--YTCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQK 515
Query: 259 --------------IDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVH 303
++ DL SWN++I G AS + E++ F M R+ ++ D +T+
Sbjct: 516 LGDLTSAFLLLEMIFETRDLTSWNSVIYGCASSGHHLESLRAFQAMSREGKIRHDLITLL 575
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
+ A + QG +H IK + + + N ++TMY +C +A+ VF L +
Sbjct: 576 GTISASGNLRLVLQGRCLHGLAIKSLRELDTQLQNTLITMYGRCKDTESAVKVFG-LISD 634
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
+ SWN +I+A Q+ E+F+LF + +++P+ ITF ++ A ++ S Q
Sbjct: 635 PNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQA 691
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
HC++ + G + FV L+D+Y CG L + K+F + +W+S+I Y G G
Sbjct: 692 HCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVKSISAWNSVISAYGFHGMG 751
Query: 484 DEALKLFTRMRS--LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC 541
++A++LF M S G+ PN T + +L+ACSH G + EGL Y ME ++G+ P EH
Sbjct: 752 EKAMELFKEMSSGNSGMEPNKSTFISLLSACSHSGFINEGLRYYNQMEEKFGVKPVTEHR 811
Query: 542 SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
C+VD+L RAG + EA +FI + VW +LL++
Sbjct: 812 VCIVDMLGRAGKLKEAYEFIIGIGEPQKAGVWGALLSA 849
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 153/542 (28%), Positives = 234/542 (43%), Gaps = 81/542 (14%)
Query: 41 LISACSSLRSLQLGRK---VHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
L+ A S+L SL L +K VH + + D L N ++N+Y K L A F M
Sbjct: 181 LLLAVSALSSLHLSKKCPMVHCLAIETGLVSDSSLCNALMNLYAKGEDLSSAECVFTHME 240
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
R++VSW ++ C N +++ + M+ SG TF +I ACS L + LG
Sbjct: 241 HRDIVSWNTIMTKCLANGYPRNSLIYFKSMIGSGQEADNVTFSCVISACSCLEELPLGES 300
Query: 158 LHAHVIKSEHG--SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
LH VIKS + +H+ N++I+MY+K I A VF + KDV SW +++ S
Sbjct: 301 LHGLVIKSGYSPEAHVSVANSIISMYSKCGDIEAAETVFEELLCKDVISWNAILNGLSAN 360
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G EA EM QP+ S+ S C +F
Sbjct: 361 GMFEEAFGILKEMQSVDKIQPDISTVVSITSICGDFCLSREGRAIHGYTVRREMQSRALE 420
Query: 252 -----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
A LF DL SWN++I+ A + EA +LF E+
Sbjct: 421 VINSVIDMYGKCGLTTQAEFLFKTTTHRDLVSWNSMISAFAQNGFTQEAKNLFREVVSEY 480
Query: 295 LLPDG--LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
TV ++L +C +L G VH ++ K+G L +
Sbjct: 481 TCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG-------------------DLTS 521
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM-LASQIKPDHITFNDVMGAC 411
A L+ + + + D SWNS+I C E R F M +I+ D IT ++G
Sbjct: 522 AFLLLEMIFETRDLTSWNSVIYGCASSGHHLESLRAFQAMSREGKIRHDLIT---LLGTI 578
Query: 412 AKMASLEMVTQ---LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
+ +L +V Q LH K+ D + N L+ +Y +C SA K+F + +P++
Sbjct: 579 SASGNLRLVLQGRCLHGLAIKSLRELDTQLQNTLITMYGRCKDTESAVKVFGLISDPNLC 638
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL----HL 524
SW+ +I +Q G E +LF R+L + PN +T VG+L+A + +G G+ HL
Sbjct: 639 SWNCVISALSQNKAGREVFQLF---RNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHL 695
Query: 525 YR 526
R
Sbjct: 696 IR 697
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 130/518 (25%), Positives = 231/518 (44%), Gaps = 75/518 (14%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
R +H L D+ + +L +YG+ G L + F ++ +++V+ W +MI +QN
Sbjct: 97 RSIHCFALKCGFLQDLATSSKLLTIYGRTGDLVSSLGLFGELKEKDVIVWNSMITCLNQN 156
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ---LHAHVIKSEHGSHL 171
+ A+ L+++M+ G +F +++ A S L S+ L ++ +H I++ S
Sbjct: 157 GRYIAAVGLFVEMIHKG---NEFDSTTLLLAVSALSSLHLSKKCPMVHCLAIETGLVSDS 213
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH 231
NAL+ +Y K + + A VF+ + +D+ SW +++ GY +L +F M+
Sbjct: 214 SLCNALMNLYAKGEDLSSAECVFTHMEHRDIVSWNTIMTKCLANGYPRNSLIYFKSMIGS 273
Query: 232 GAYQPNEFIFGSVFSACS------------------------------------------ 249
G + + F V SACS
Sbjct: 274 GQ-EADNVTFSCVISACSCLEELPLGESLHGLVIKSGYSPEAHVSVANSIISMYSKCGDI 332
Query: 250 NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD-RELLPDGLTVHSLLCA 308
A +F E+ D+ SWNA++ G++++ EA + EM+ ++ PD TV S+
Sbjct: 333 EAAETVFEELLCKDVISWNAILNGLSANGMFEEAFGILKEMQSVDKIQPDISTVVSITSI 392
Query: 309 CIGRLTLYQGMQVHSYIIKMGFDSN-VPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
C +G +H Y ++ S + V N+++ MY KC + A +FK + D V
Sbjct: 393 CGDFCLSREGRAIHGYTVRREMQSRALEVINSVIDMYGKCGLTTQAEFLFKTT-THRDLV 451
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG---ACAKMASLEMVTQLH 424
SWNS+I+A Q+ +E LF R + S+ + + V+ +C SL +H
Sbjct: 452 SWNSMISAFAQNGFTQEAKNLF-REVVSEYTCSKFSLSTVLAILTSCDSSDSLIFGKSVH 510
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
C++ K G F++ L E D+ SW+S+I G A G
Sbjct: 511 CWLQKLGDLTSAFLL------------------LEMIFETRDLTSWNSVIYGCASSGHHL 552
Query: 485 EALKLFTRMRSLG-VSPNLVTLVGVLTACSHVGLVEEG 521
E+L+ F M G + +L+TL+G ++A ++ LV +G
Sbjct: 553 ESLRAFQAMSREGKIRHDLITLLGTISASGNLRLVLQG 590
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 4/235 (1%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
E+L A+ IR T G ISA +LR + GR +H + S + D LQN +
Sbjct: 553 ESLRAFQAMSREGKIRHDLITLLGTISASGNLRLVLQGRCLHGLAIKSLRELDTQLQNTL 612
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
+ MYG+C E A F + N+ SW +I+ SQN + +L+ + + P +
Sbjct: 613 ITMYGRCKDTESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNE 669
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG 196
TF ++ A + LGS G Q H H+I+ ++ AL+ MY+ + VF
Sbjct: 670 ITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRN 729
Query: 197 IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH-HGAYQPNEFIFGSVFSACSN 250
K +++W S+I+A+ G +A+ F EM + +PN+ F S+ SACS+
Sbjct: 730 SGVKSISAWNSVISAYGFHGMGEKAMELFKEMSSGNSGMEPNKSTFISLLSACSH 784
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 142/297 (47%), Gaps = 6/297 (2%)
Query: 285 SLFSEM--RD-RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
+LF EM RD R + + + +L + + R+ +H + +K GF ++ + +L
Sbjct: 60 NLFDEMPKRDNRTVEASFMFLRDVLRSFMMRIETETPRSIHCFALKCGFLQDLATSSKLL 119
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
T+Y + L ++L +F EL K D + WNS+I Q+ + LF M+ + D
Sbjct: 120 TIYGRTGDLVSSLGLFGEL-KEKDVIVWNSMITCLNQNGRYIAAVGLFVEMIHKGNEFDS 178
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
T + A + + + +HC +TGL D + N LM++Y K L SA +F
Sbjct: 179 TTLLLAVSALSSLHLSKKCPMVHCLAIETGLVSDSSLCNALMNLYAKGEDLSSAECVFTH 238
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
ME+ D+VSW++++ G +L F M G + VT V++ACS + + G
Sbjct: 239 MEHRDIVSWNTIMTKCLANGYPRNSLIYFKSMIGSGQEADNVTFSCVISACSCLEELPLG 298
Query: 522 LHLYR-IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
L+ ++++ Y + ++ + ++ G + AE ++ C D++ W ++L
Sbjct: 299 ESLHGLVIKSGYSPEAHVSVANSIISMYSKCGDIEAAETVFEELLCK-DVISWNAIL 354
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 176/553 (31%), Positives = 274/553 (49%), Gaps = 57/553 (10%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MY C S DA+ FD + QRN+ SWT ++A + + Q + ++ +M Q GV P T
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
F + + +C S+ G ++H V+ S NAL+ MY K + A+ VF+ +
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 199 R-KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------- 250
R ++V SW M A + G EAL HF ML G + + ++ SACS+
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLG-IKATKSAMVTILSACSSPALVQDG 179
Query: 251 ---------------------------------FARILFNEIDSP--DLASWNALIAGVA 275
AR +F+ +D D+ SWN +++
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
+ +A+ L+ M +L PD +T SLL AC + G +H I+ + NV
Sbjct: 240 HNDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVI 296
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML-- 393
V NA+++MYAKC A VF ++ + + +SW +II+A ++ E LF +ML
Sbjct: 297 VGNALVSMYAKCGSHTEARAVFDKMEQRS-IISWTTIISAYVRRRLVAEACHLFQQMLEL 355
Query: 394 -----ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
+ ++KPD + F ++ ACA +++LE + GL+ D V ++++Y K
Sbjct: 356 EKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGK 415
Query: 449 CGSLGSARKLFNFM-ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
CG + AR++F+ + PDV W+++I YAQFG EALKLF RM GV P+ + V
Sbjct: 416 CGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVS 475
Query: 508 VLTACSHVGLVEEGLHLYRIMENEY-GIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
+L ACSH GL ++G + M EY + T +H CV DLL R G + EAE+F+ ++
Sbjct: 476 ILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPV 535
Query: 567 DADIVVWKSLLAS 579
D V W SLLA+
Sbjct: 536 KPDAVAWTSLLAA 548
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/503 (26%), Positives = 222/503 (44%), Gaps = 71/503 (14%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP T+ + +C SL+ G ++H ++ S+ + D + N +LNMY KCGSL A+
Sbjct: 54 VRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAK 113
Query: 91 MGFDKMPQ-RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F KM + RNV+SW+ M + + +A++ + ML G+ + +I+ ACS
Sbjct: 114 RVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSP 173
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI--ARKDVTSWGS 207
V GR +H+ + S S L+ NA++ MY + + +AR VF + A +DV SW
Sbjct: 174 ALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNI 233
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------- 251
M++ + +A+ + M +P++ + S+ SACS+
Sbjct: 234 MLSTYVHNDRGKDAIQLYQRM----QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVND 289
Query: 252 ------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
AR +F++++ + SW +I+ EA LF
Sbjct: 290 ELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLF 349
Query: 288 SEMRDRE-------LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
+M + E + PD L ++L AC L QG V G S+ V A+
Sbjct: 350 QQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAV 409
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+ +Y KC + A +F + D WN++IA Q Q+ E +LF RM ++PD
Sbjct: 410 VNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPD 469
Query: 401 HITFNDVMGACA--------KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
+F ++ AC+ K M T+ +T+T F + D+ + G L
Sbjct: 470 SFSFVSILLACSHTGLEDQGKSYFTSMTTEYR-NVTRTIQHFGC-----VADLLGRGGRL 523
Query: 453 GSARKLFNFME-NPDVVSWSSLI 474
A + + PD V+W+SL+
Sbjct: 524 KEAEEFLEKLPVKPDAVAWTSLL 546
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 200/423 (47%), Gaps = 69/423 (16%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+ S ++SACSS +Q GR +H I LS + ++++ N ++ MYG+CG++E+AR
Sbjct: 156 IKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEAR 215
Query: 91 MGFDKMPQ--RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
FD M + R+VVSW M++ N + DAI+LY +M + P + T+ S++ ACS
Sbjct: 216 KVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSS 272
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
V LGR LH ++ E ++I NAL++MY K +AR VF + ++ + SW ++
Sbjct: 273 AEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTI 332
Query: 209 IAAFSKLGYELEALCH-FNEMLH---HGAYQ---PNEFIFGSVFSACSNF---------- 251
I+A+ + EA CH F +ML +G+ Q P+ F ++ +AC++
Sbjct: 333 ISAYVRRRLVAEA-CHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVS 391
Query: 252 ------------------------------ARILFNEIDS-PDLASWNALIAGVASHSNA 280
AR +F+ + S PD+ WNA+IA A +
Sbjct: 392 EQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQS 451
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD-----SNVP 335
+EA+ LF M + PD + S+L AC QG SY M + +
Sbjct: 452 HEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQG---KSYFTSMTTEYRNVTRTIQ 508
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRL 388
+ + + L A ++L D+V+W S++AAC H A +L RL
Sbjct: 509 HFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRL 568
Query: 389 FSR 391
R
Sbjct: 569 EPR 571
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 126/238 (52%), Gaps = 11/238 (4%)
Query: 23 DFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMY 80
D Q +++RP TY L+SACSS + LGR +H I+ + + +V++ N +++MY
Sbjct: 246 DAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMY 305
Query: 81 GKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ-------SGVM 133
KCGS +AR FDKM QR+++SWT +I+ + +A L+ QML+ V
Sbjct: 306 AKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVK 365
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P F +I+ AC+ + ++ G+ + S A++ +Y K I +AR +
Sbjct: 366 PDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRI 425
Query: 194 FSGI-ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
F + +R DV W +MIA +++ G EAL F M G +P+ F F S+ ACS+
Sbjct: 426 FDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGV-RPDSFSFVSILLACSH 482
>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
Length = 1009
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 174/572 (30%), Positives = 292/572 (51%), Gaps = 34/572 (5%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++ LISA + + + L +PD++ + +L+ + + G ++ A ++M
Sbjct: 251 SWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEM 310
Query: 97 PQR----NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
P+R V SW +I+GC QN DA+ ++ +ML P T SI+ AC+GL ++
Sbjct: 311 PERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKAL 370
Query: 153 CLGRQLHAHVIKSEHG--SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
LG+ +H I +HG ++ + ++I MY+K A VF K+ W MIA
Sbjct: 371 RLGKAIHX--IAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIA 428
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA-CSNFARILFNEIDS-------- 261
A+ G +AL M G ++P+ + ++ S N + E+ S
Sbjct: 429 AYVNEGKVEDALGLLRSMQKDG-WKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLK 487
Query: 262 PDLASWNALIAGVASHSNANEAMSLF------------SEMRDRELLPDGLTVHSLLCAC 309
P++ S+N LI+G + EA+ +F +E+ + + P+ +T+ L AC
Sbjct: 488 PNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPAC 547
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL-GKNADSVS 368
QG ++H Y ++ GF+ N+ V +A++ MYAKC + +A VF + G+N +VS
Sbjct: 548 ADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRN--TVS 605
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
WN+++A + + Q EE +LF ML ++P ITF + AC +A++ LH Y
Sbjct: 606 WNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAA 665
Query: 429 KTGL-AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K L + + L+D+Y KCGS+ A+ +F+ DV W+++I ++ G A
Sbjct: 666 KCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAF 725
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
+F +M LG+ P+ +T V +L+AC+ GLVEEG + ME YG+ T EH +C+V +
Sbjct: 726 AVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGI 785
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
L AG + EA DFI QM D +W +LL +
Sbjct: 786 LGGAGLLDEALDFIRQMPYPPDACMWATLLQA 817
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 152/568 (26%), Positives = 260/568 (45%), Gaps = 75/568 (13%)
Query: 41 LISACSSLRSLQLGRKVHDHIL-LSKCQPDVVLQNHILNMYGKCG-SLEDARMGFDKMPQ 98
L++ CS+L R++H ++ L+ + + N ++ +Y K SLEDAR D++P
Sbjct: 89 LLNRCSTLSEF---RQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPN 145
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
R V ++ A+I ++ Q ++ + M+ G++P ++ +I+KACS + +G+ +
Sbjct: 146 RTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMV 205
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H VI+ S + NALI Y+ + +R+VF + +DV SW ++I+A+ + G
Sbjct: 206 HGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLX 265
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEID--------------SPDL 264
EA H ++ +P+ + ++ S FAR EID P +
Sbjct: 266 DEAK-HIFHLMQLDGVKPDLISWSALLSG---FAR--NGEIDLALETLEEMPERGLQPTV 319
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
SWN +I+G + +A+ +FS M P+ +T+ S+L AC G L G +H
Sbjct: 320 NSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXI 379
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
K G NV V +++ MY+KC A VF + +N ++ WN +IAA + + E+
Sbjct: 380 AXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXK-AENKNTAMWNEMIAAYVNEGKVED 438
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
L M KPD IT+N ++ A+ +L + + GL
Sbjct: 439 ALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGL------------ 486
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS--------- 495
P+VVS++ LI G+ Q G EALK+F M+S
Sbjct: 487 -------------------KPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNE 527
Query: 496 ---LGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLAR 550
L + PN +T+ G L AC+ + L +G +H Y + G P S +VD+ A+
Sbjct: 528 VLNLSMRPNPITITGALPACADLNLWCQGKEIHGYTLRN---GFEPNIFVSSALVDMYAK 584
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLA 578
+ A ++ + V W +L+A
Sbjct: 585 CHDMDSANKVFFRID-GRNTVSWNALMA 611
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 156/329 (47%), Gaps = 26/329 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQN-----------NTNIRIRPSTYAGLISACSSLRSL 51
N +S + L EAL + Q+ N ++R P T G + AC+ L
Sbjct: 494 NVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLW 553
Query: 52 QLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGC 111
G+++H + L + +P++ + + +++MY KC ++ A F ++ RN VSW A++AG
Sbjct: 554 CQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGY 613
Query: 112 SQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL 171
N Q +A+KL+++ML G+ P TF + AC + ++ GR LH + K +
Sbjct: 614 INNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELK 673
Query: 172 IA-QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
A +ALI MY K ILDA++VF KDV W +MI+AFS G A F +M
Sbjct: 674 NAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMEL 733
Query: 231 HGAYQPNEFIFGSVFSACSNFARI-----LFNEID-----SPDLASWNALIAGVASHSNA 280
G P+ F S+ SAC+ + FN ++ + L + ++ +
Sbjct: 734 LGI-XPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLL 792
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+EA+ +M PD +LL AC
Sbjct: 793 DEALDFIRQM---PYPPDACMWATLLQAC 818
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 136/271 (50%), Gaps = 7/271 (2%)
Query: 314 TLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCS-VLCNALLVFKELGKNADSVSWNS 371
TL + Q+H+ ++K+ + N ++ +Y K L +A + E+ N ++ +
Sbjct: 95 TLSEFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEI-PNRTVPAYAA 153
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+I + + Q +ELF F M+ + PD ++ AC+ M + +H ++ +
Sbjct: 154 LIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKS 213
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
+ DVFV N L+ Y CG LGS+R +F+ M+ DVVSW++LI Y + G DEA +F
Sbjct: 214 VESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFH 273
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
M+ GV P+L++ +L+ + G ++ L M E G+ PT + ++ +
Sbjct: 274 LMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMP-ERGLQPTVNSWNGIISGCVQN 332
Query: 552 GCVHEAEDFINQM---ACDADIVVWKSLLAS 579
G + +A D ++M D +I+ S+L +
Sbjct: 333 GYLEDALDMFSRMLWYPEDPNIITIASILPA 363
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 175/602 (29%), Positives = 313/602 (51%), Gaps = 52/602 (8%)
Query: 27 NNTNIRIRPS--TYAGLISACSSLRSLQLG--RKVHDHILLSKCQPDVVLQNHILNMYGK 82
+++ I +RP+ T+ LI+A + L S LG ++ +L S C D+ + + +++ + +
Sbjct: 267 DDSGIELRPTEHTFGSLITA-TYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFAR 325
Query: 83 CGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ---FTF 139
G L++A+ + + +RN V+ +IAG + A ++++ S +
Sbjct: 326 HGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLL 385
Query: 140 GSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA-QNALIAMYTKFDRILDARNVFSGIA 198
+I + + + GR++HAHV+++ H IA N L+ MY K I A VF +
Sbjct: 386 SAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLME 445
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---- 254
+D SW ++I A + GY A+ ++ ++ + P+ F S S+C+ +
Sbjct: 446 ARDRISWNTIITALDQNGYCEAAMMNYC-LMRQNSIGPSNFAAISGLSSCAGLGLLAAGQ 504
Query: 255 ------------------------------------LFNEIDSPDLASWNALIAGVAS-H 277
+FN + + D+ SWN+++ +AS
Sbjct: 505 QLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQ 564
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
+ E++ +FS M L+P+ +T + L A L G Q+HS ++K G + V
Sbjct: 565 APITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVD 624
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
NA+++ YAK + + +F + D++SWNS+I+ + + +E M+ S+
Sbjct: 625 NALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQ 684
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
DH TF+ V+ ACA +A+LE ++H + ++ L DV V + L+D+Y KCG + A K
Sbjct: 685 MMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASK 744
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
+F+ M + SW+S+I GYA+ G G +AL++F M+ G SP+ VT V VL+ACSH GL
Sbjct: 745 VFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGL 804
Query: 518 VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
VE GL + +ME +YGI+P EH SCV+DLL RAG + + ++++ +M + ++W+++L
Sbjct: 805 VERGLDYFELME-DYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVL 863
Query: 578 AS 579
+
Sbjct: 864 VA 865
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 170/607 (28%), Positives = 288/607 (47%), Gaps = 71/607 (11%)
Query: 34 RPSTYAGLISACSSLRSLQLG-----RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
RP +A ++ LR + G +H ++ D+ L NH++N Y K L+
Sbjct: 64 RPHPHADVL-----LRGRRPGCDASPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDA 118
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG--VMPGQFTFGSIIKAC 146
AR FD MP RN VSWT +I+G + DA L+ ML+ G P FTFGS+++AC
Sbjct: 119 ARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRAC 178
Query: 147 SGLGSVCLG--RQLHAHVIKSEHGSHLIAQNALIAMYTK--FDRILDARNVFSGIARKDV 202
G LG Q+H V K+E S+ NALI+MY + A+ VF +D+
Sbjct: 179 QDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDL 238
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGA---YQPNEFIFGSVFSA-----CSN---- 250
+W ++++ ++K G + F M + + +P E FGS+ +A CS
Sbjct: 239 ITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLD 298
Query: 251 --FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP-DGLT------ 301
F R+L + S DL +AL++ A H +EA ++ +++R + +GL
Sbjct: 299 QLFVRVLKSGCSS-DLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQ 357
Query: 302 ----------------------VHSLLCACIGRLT-----LYQGMQVHSYIIKMG-FDSN 333
+ +L + I + L +G +VH+++++ G
Sbjct: 358 QHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRK 417
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
+ V N ++ MYAKC + A VF +L + D +SWN+II A Q+ E + M
Sbjct: 418 IAVSNGLVNMYAKCGAIDKACRVF-QLMEARDRISWNTIITALDQNGYCEAAMMNYCLMR 476
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
+ I P + + +CA + L QLHC K GL D V N L+ +Y +CG +
Sbjct: 477 QNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMS 536
Query: 454 SARKLFNFMENPDVVSWSSL--ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
++FN M DVVSW+S+ ++ +Q E++++F+ M G+ PN VT V L A
Sbjct: 537 ECWEIFNSMSAHDVVSWNSIMGVMASSQAPI-TESVQVFSNMMKSGLVPNKVTFVNFLAA 595
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
+ + ++E G ++ +M ++G+ + ++ A++G V E ++M+ D +
Sbjct: 596 LTPLSVLELGKQIHSVML-KHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAI 654
Query: 572 VWKSLLA 578
W S+++
Sbjct: 655 SWNSMIS 661
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/545 (24%), Positives = 243/545 (44%), Gaps = 58/545 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSL----RSLQLGRKVH 58
N ++ L KQ A + ++++ + + TY L+SA + + L+ GR+VH
Sbjct: 348 NGLIAGLVKQQHGEAAAEIFMGARDSAAVNV--DTYVVLLSAIAEFSTAEQGLRKGREVH 405
Query: 59 DHILLS-KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQE 117
H+L + + + N ++NMY KCG+++ A F M R+ +SW +I QN
Sbjct: 406 AHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYC 465
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
A+ Y M Q+ + P F S + +C+GLG + G+QLH +K NAL
Sbjct: 466 EAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNAL 525
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL-EALCHFNEMLHHGAYQP 236
+ MY + R+ + +F+ ++ DV SW S++ + + E++ F+ M+ G P
Sbjct: 526 VKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLV-P 584
Query: 237 NEFIFGSVFSACSNFARILF----------------NEIDSP------------------ 262
N+ F + +A + + + N +D+
Sbjct: 585 NKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLF 644
Query: 263 -------DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
D SWN++I+G + + EAM M E + D T +L AC L
Sbjct: 645 SRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAAL 704
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
+GM++H++ ++ +S+V V +A++ MY+KC + A VF + + + SWNS+I+
Sbjct: 705 ERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQK-NEFSWNSMISG 763
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
+H + +F M S PDH+TF V+ AC+ +E + G+
Sbjct: 764 YARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELMEDYGILPR 823
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILG------YAQFGCGDEALK 488
+ + ++D+ + G L ++ M P+ + W ++++ A+ G EA +
Sbjct: 824 IEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASR 883
Query: 489 LFTRM 493
+ +
Sbjct: 884 MLLEL 888
>gi|357165628|ref|XP_003580444.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Brachypodium distachyon]
Length = 779
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 181/595 (30%), Positives = 303/595 (50%), Gaps = 55/595 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILL-SKCQPDV-VLQNHILNMYGKC-----GSLEDA 89
TY+ ++AC+ R L+LGR VH H+L ++ PD VL+N +LN+Y C G ++
Sbjct: 102 TYSCALTACARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLNLYASCARYRHGGVDVV 161
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD P+RNVVSW ++ + + +A++++++ML+ G+ P +F ++ A +
Sbjct: 162 RRLFDATPKRNVVSWNTLVGWYVKTGRPYEALEMFMRMLEDGIRPTPVSFVNVFPAAAS- 220
Query: 150 GSVCLGRQLHAHVIKS--EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
L+ +IK E+ S L ++ IAM+++ + AR VF A+K++ W +
Sbjct: 221 DDPSWPFFLYGMLIKHGVEYVSDLFVVSSAIAMFSEIGDVQSARMVFDHAAKKNIEVWNT 280
Query: 208 MIAAFSKLGYELEALCHF-------------------------------NEMLH----HG 232
MI + + G EA+ F + LH G
Sbjct: 281 MITGYVQNGQFSEAMDLFIQIMGSKGVPLDVVTFLSAITAASQSQDGKLGQQLHGYLMKG 340
Query: 233 AYQPNEFIFGS----VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
I G+ ++S C N A LF+++ D+ SWN ++ + E + L
Sbjct: 341 MRSTLPVILGNALVVMYSRCGNVHAAFDLFDQLPEKDIVSWNTMVTAFVQNDFDFEGLLL 400
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
+M + D +T+ ++L A L G Q H Y+I+ G + + + ++ MY+K
Sbjct: 401 VYQMHKSGFVADAVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGE-GLESYLINMYSK 459
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
+ A VF G + D V+WN++IA Q Q E+ F M+ + ++P +T
Sbjct: 460 SGHIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLAFRAMVEAGVEPTSVTLAS 519
Query: 407 VMGACAKMAS-LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
V+ AC + ++ Q+H + + L ++FV L+D+Y KCG + +A +F+ M
Sbjct: 520 VLPACEPVGEGVQAGKQIHSFALRHSLDTNIFVGTALVDMYSKCGEITAAENVFDRMTEK 579
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
V+++++I G Q G GD AL LF M+ G+ P+ VT + ++AC++ GLV+EGL LY
Sbjct: 580 STVTYTTMISGLGQHGFGDRALFLFYSMQDNGLKPDAVTFLAAISACNYSGLVDEGLSLY 639
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD-IVVWKSLLAS 579
R ME +G+ T +H C+VDLLA+AG V EA DF+ + D + I +W SLLAS
Sbjct: 640 RSMET-FGLSATPQHHCCIVDLLAKAGRVEEAYDFVESLGEDGNFIAIWGSLLAS 693
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 140/561 (24%), Positives = 258/561 (45%), Gaps = 76/561 (13%)
Query: 82 KCGSLEDAR-MGFDKMPQRNV-----VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
K G LE AR + D +P+ V A +AG ++ A+ LY + + P
Sbjct: 41 KQGRLEHARRLLLDALPRPPPTLLCNVLLIAYVAGALPDH----ALGLYGVLNHAARPPP 96
Query: 136 Q---FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG--SHLIAQNALIAMYTKFDRILDA 190
+ +T+ + AC+ + LGR +HAH+++ + +N+L+ +Y R
Sbjct: 97 RSDHYTYSCALTACARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLNLYASCARYRHG 156
Query: 191 -----RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
R +F +++V SW +++ + K G EAL F ML G +P F +VF
Sbjct: 157 GVDVVRRLFDATPKRNVVSWNTLVGWYVKTGRPYEALEMFMRMLEDG-IRPTPVSFVNVF 215
Query: 246 SACSN-----------------------------------------FARILFNEIDSPDL 264
A ++ AR++F+ ++
Sbjct: 216 PAAASDDPSWPFFLYGMLIKHGVEYVSDLFVVSSAIAMFSEIGDVQSARMVFDHAAKKNI 275
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLP-DGLTVHSLLCACIGRLTLYQGMQVHS 323
WN +I G + +EAM LF ++ + +P D +T S + A G Q+H
Sbjct: 276 EVWNTMITGYVQNGQFSEAMDLFIQIMGSKGVPLDVVTFLSAITAASQSQDGKLGQQLHG 335
Query: 324 YIIKMGFDSNVPVC--NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
Y++K G S +PV NA++ MY++C + A +F +L + D VSWN+++ A +Q++
Sbjct: 336 YLMK-GMRSTLPVILGNALVVMYSRCGNVHAAFDLFDQLPEK-DIVSWNTMVTAFVQNDF 393
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
E L +M S D +T V+ A + L++ Q H Y+ + G+ + + +
Sbjct: 394 DFEGLLLVYQMHKSGFVADAVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGE-GLESY 452
Query: 442 LMDIYIKCGSLGSARKLFN-FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+++Y K G + A+++F+ + + D V+W+++I GY Q G ++A+ F M GV P
Sbjct: 453 LINMYSKSGHIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLAFRAMVEAGVEP 512
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMEN---EYGIIPTREHCSCVVDLLARAGCVHEA 557
VTL VL AC VG EG+ + + + + + + +VD+ ++ G + A
Sbjct: 513 TSVTLASVLPACEPVG---EGVQAGKQIHSFALRHSLDTNIFVGTALVDMYSKCGEITAA 569
Query: 558 EDFINQMACDADIVVWKSLLA 578
E+ ++M + V + ++++
Sbjct: 570 ENVFDRM-TEKSTVTYTTMIS 589
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 192/426 (45%), Gaps = 48/426 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + ++EA+ + + + + T+ I+A S + +LG+++H +++
Sbjct: 279 NTMITGYVQNGQFSEAMDLFIQIMGSKGVPLDVVTFLSAITAASQSQDGKLGQQLHGYLM 338
Query: 63 LS-KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ V+L N ++ MY +CG++ A FD++P++++VSW M+ QN + + +
Sbjct: 339 KGMRSTLPVILGNALVVMYSRCGNVHAAFDLFDQLPEKDIVSWNTMVTAFVQNDFDFEGL 398
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA-QNALIAM 180
L QM +SG + T +++ A S G + +G+Q H ++I+ HG ++ LI M
Sbjct: 399 LLVYQMHKSGFVADAVTLTAVLSAASNTGDLQIGKQSHGYLIR--HGIEGEGLESYLINM 456
Query: 181 YTKFDRILDARNVFSGIAR-KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
Y+K I A+ VF G +D +W +MIA +++ G +A+ F M+ G +P
Sbjct: 457 YSKSGHIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLAFRAMVEAGV-EPTSV 515
Query: 240 IFGSVFSACSNF-----------------------------------------ARILFNE 258
SV AC A +F+
Sbjct: 516 TLASVLPACEPVGEGVQAGKQIHSFALRHSLDTNIFVGTALVDMYSKCGEITAAENVFDR 575
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ ++ +I+G+ H + A+ LF M+D L PD +T + + AC + +G
Sbjct: 576 MTEKSTVTYTTMISGLGQHGFGDRALFLFYSMQDNGLKPDAVTFLAAISACNYSGLVDEG 635
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS-WNSIIAACL 377
+ ++ + G + I+ + AK + A + LG++ + ++ W S++A+C
Sbjct: 636 LSLYRSMETFGLSATPQHHCCIVDLLAKAGRVEEAYDFVESLGEDGNFIAIWGSLLASCK 695
Query: 378 QHNQAE 383
+ E
Sbjct: 696 AQGKQE 701
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 181/611 (29%), Positives = 302/611 (49%), Gaps = 104/611 (17%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+A ++ ++ GR VH I+ V L N+++ Y K GSL A FD+MP
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 98 QRNV-------------------------------VSWTAMIAGCSQNYQENDAIKLYIQ 126
++ VSWTA+I G +Q ++AI ++ +
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M+ V P QFT +++ +C+ ++ +GR++H+ V+K GS + +L+ MY K
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLG-YELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A+ VF + K++++W ++I+ + + G +EL A F +M P+
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAA-SQFEKM-------PDR------- 237
Query: 246 SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHS 304
D+ SWN++I+G + EA+++FS+M + L PD T+ S
Sbjct: 238 -----------------DIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLAS 280
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV-------- 356
+L AC L G Q+H+YI++ +++ V NA+++MYAK + A L+
Sbjct: 281 ILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSN 340
Query: 357 ------------FKELG------------KNADSVSWNSIIAACLQH---NQAEELFRLF 389
+ +LG ++ D V+W ++I +Q+ N A ELFRL
Sbjct: 341 LNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRL- 399
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
M+ +P+ T ++ + + LE Q+H K G + V N L+ +Y K
Sbjct: 400 --MVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKT 457
Query: 450 GSLGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
G++ A+++F+ ++VSW+S+I+ AQ G G EA+ LF RM S+G+ P+ +T VGV
Sbjct: 458 GNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGV 517
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
L+AC+HVGLVE+G Y +M + I PT H +C++DL RAG + EA FI M +
Sbjct: 518 LSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEP 577
Query: 569 DIVVWKSLLAS 579
D + W SLLAS
Sbjct: 578 DNIAWGSLLAS 588
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/508 (23%), Positives = 220/508 (43%), Gaps = 122/508 (24%)
Query: 32 RIRPS--TYAGLISACSSLRSLQLGRKVHDHIL---LSKCQPDVVLQNHILNMYGKC--- 83
R+ PS T + ++S+C++ ++L +GRK+H ++ L C P + +LNMY KC
Sbjct: 137 RVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVP---VATSLLNMYAKCGDP 193
Query: 84 ----------------------------GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
G E A F+KMP R++VSW +MI+G SQ
Sbjct: 194 VIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQG 253
Query: 116 QENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
+A+ ++ +ML + + P FT SI+ AC+ L + +G+Q+HA+++++E +
Sbjct: 254 YNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVG 313
Query: 175 NALIAMYTK-----------------------FDRILD----------ARNVFSGIARKD 201
NALI+MY K F +LD AR +F+ + +D
Sbjct: 314 NALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRD 373
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------ 249
V +W +MI + + G +AL F M++ G +PN + ++ S S
Sbjct: 374 VVAWTAMIVGYVQNGLWNDALELFRLMVNEGP-EPNSYTLAAMLSVSSSLTILEHGKQIH 432
Query: 250 ----------------------------NFARILFNEID-SPDLASWNALIAGVASHSNA 280
N A+ +F+ + ++ SW ++I +A H
Sbjct: 433 ASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLG 492
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNA 339
EA++LF M + PD +T +L AC + QG + ++ + ++ + +
Sbjct: 493 KEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYAC 552
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
++ +Y + +L A L + + D+++W S++A+C H A+ R+L I P
Sbjct: 553 MIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLL--IDP 610
Query: 400 D----HITFNDVMGACAKMASLEMVTQL 423
++ +V AC K + +L
Sbjct: 611 GNSGAYLALANVYSACGKWENAAQTRKL 638
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 163/352 (46%), Gaps = 50/352 (14%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S +Q EAL + N +++ T A ++SAC++L L +G+++H +IL
Sbjct: 243 NSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYIL 302
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARM------------------------------- 91
++ + + N +++MY K G +E AR+
Sbjct: 303 RAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPA 362
Query: 92 --GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F+K+ R+VV+WTAMI G QN NDA++L+ M+ G P +T +++ S L
Sbjct: 363 REIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSL 422
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS-GIARKDVTSWGSM 208
+ G+Q+HA IK+ S NALIAMY K I A+ VF +K++ SW SM
Sbjct: 423 TILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSM 482
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-----ARILFN------ 257
I A ++ G EA+ F ML G +P+ + V SAC++ R +N
Sbjct: 483 IMALAQHGLGKEAINLFERMLSVG-MKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVH 541
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
EI+ P L+ + +I EA M + PD + SLL +C
Sbjct: 542 EIE-PTLSHYACMIDLYGRAGLLQEAYLFIESM---PIEPDNIAWGSLLASC 589
>gi|302817750|ref|XP_002990550.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
gi|300141718|gb|EFJ08427.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
Length = 917
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 170/585 (29%), Positives = 299/585 (51%), Gaps = 51/585 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +++ACSS +L G +++ IL +++ N I+ MY CG +++A F M
Sbjct: 308 TFITILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTM 367
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R+ +SW +I+G +Q ++A+ L+ +ML G+ P +FTF SII G + +
Sbjct: 368 VERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISII---DGTARMQEAK 424
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
L +++S + +ALI M++++ + +AR++F + +D+ W S+I+++ + G
Sbjct: 425 ILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHG 484
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+AL M G N+F + +AC++
Sbjct: 485 SSDDALGCTRLMRLEG-LMGNDFTLVTALNACASLTALSEGKLIHSHAIERGFAASPAVG 543
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A ++F++ +L SWN + A EA+ LF EM+ L
Sbjct: 544 NALINMYAKCGCLEEADLVFHQC-GKNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLK 602
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
D ++ ++L C + +G ++H+ +++ G +S+ V A+L MY L A +
Sbjct: 603 ADKVSFVTVLNGCS---SASEGSKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRI 659
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA--CAKM 414
F + + D VSWN++IA +H + E ++F RM + PD I+F V+ A +
Sbjct: 660 FSRM-EFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSP 718
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+SL+ + I+ G D V N ++ ++ + G L AR+ F + D SW+ ++
Sbjct: 719 SSLKQARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNVIV 778
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
+AQ G ++ALKLF RM+ P+ +TLV VL+ACSH GL+EEG + + M E+GI
Sbjct: 779 TAHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLSACSHGGLIEEGYYHFTSMGREFGI 838
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++EH CVVDLLARAG + +AE+ + +M A V+W +LL++
Sbjct: 839 AGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYVLWMTLLSA 883
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 173/586 (29%), Positives = 302/586 (51%), Gaps = 53/586 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L+ C+ ++ GR VH + S+ + D ++QN ++MYGKCG +EDA F +
Sbjct: 4 TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQSL 63
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ VSW +++A +++ Q A +++ +M G+ P + TF +++ C+ G + G+
Sbjct: 64 DHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLSRGK 123
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
LH V+++ +++ +LI MY K + DAR VF +A +DV SW SMI + +
Sbjct: 124 LLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHD 183
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+EAL F+ M G PN + + SAC++
Sbjct: 184 RCVEALELFHRMRPSGVL-PNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVS 242
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR-DREL 295
AR +F + P+ SWNA++A H EA+ F M+
Sbjct: 243 CAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGS 302
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD +T ++L AC TL G ++ I++ G+D+++ V N I+TMY+ C + NA
Sbjct: 303 TPDKVTFITILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAA 362
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
F + + D++SWN+II+ Q +E LF RMLA I PD TF ++ A+M
Sbjct: 363 FFSTMVER-DAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQ 421
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+++++L + ++G+ DVF+++ L++++ + G++ AR LF+ M++ D+V W+S+I
Sbjct: 422 EAKILSEL---MVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIIS 478
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYG 533
Y Q G D+AL MR G+ N TLV L AC+ + + EG +H + I E G
Sbjct: 479 SYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHSHAI---ERG 535
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + ++++ A+ GC+ EA+ +Q C ++V W ++ A+
Sbjct: 536 FAASPAVGNALINMYAKCGCLEEADLVFHQ--CGKNLVSWNTIAAA 579
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 156/582 (26%), Positives = 289/582 (49%), Gaps = 50/582 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ C++ L G+ +H +L + + +V++ ++ MYGKCG +EDAR FDK+
Sbjct: 105 TFVTVLDGCTATGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKL 164
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++VVSWT+MI Q+ + +A++L+ +M SGV+P + T+ + I AC+ + S+ G+
Sbjct: 165 ALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGK 224
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H+ V++ S ++ A++ MY K + DAR VF + + SW +++AA ++ G
Sbjct: 225 LIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHG 284
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE------------------ 258
+EAL +F M G P++ F ++ +ACS+ A + F E
Sbjct: 285 CCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFGELLYECILQCGYDTHLIVG 344
Query: 259 ------------IDSP----------DLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
ID+ D SWN +I+G A +EA+ LF M +
Sbjct: 345 NCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGIT 404
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD T S++ G + + + +++ G + +V + +A++ M+++ + A +
Sbjct: 405 PDKFTFISII---DGTARMQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSL 461
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F ++ K+ D V W SII++ +QH +++ M + + T + ACA + +
Sbjct: 462 FDDM-KDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTA 520
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L +H + + G A V N L+++Y KCG L A +F+ ++VSW+++
Sbjct: 521 LSEGKLIHSHAIERGFAASPAVGNALINMYAKCGCLEEADLVFHQC-GKNLVSWNTIAAA 579
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y Q EAL+LF M+ G+ + V+ V VL CS EG ++ I+ E G+
Sbjct: 580 YVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSAS---EGSKIHNILL-ETGMES 635
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++++ + + EA ++M DIV W +++A
Sbjct: 636 DHIVSTALLNMYTASKSLDEASRIFSRMEF-RDIVSWNAMIA 676
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 185/430 (43%), Gaps = 66/430 (15%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
C + + E L+ DF T ++AC+SL +L G+ +H H +
Sbjct: 492 CTRLMRLEGLMGNDF------------TLVTALNACASLTALSEGKLIHSHAIERGFAAS 539
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
+ N ++NMY KCG LE+A + F + +N+VSW + A Q + +A++L+ +M
Sbjct: 540 PAVGNALINMYAKCGCLEEADLVFHQCG-KNLVSWNTIAAAYVQRDKWREALQLFQEMQL 598
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD 189
G+ + +F +++ CS S G ++H ++++ S I AL+ MYT + +
Sbjct: 599 EGLKADKVSFVTVLNGCS---SASEGSKIHNILLETGMESDHIVSTALLNMYTASKSLDE 655
Query: 190 ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
A +FS + +D+ SW +MIA ++ G EA+ F M G P++ F +V +A S
Sbjct: 656 ASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGV-APDKISFVTVLNAFS 714
Query: 250 NF------------------------------------------ARILFNEIDSPDLASW 267
AR F I D ASW
Sbjct: 715 GSSPSSLKQARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASW 774
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
N ++ A H +A+ LF M+ PD +T+ S+L AC + +G + +
Sbjct: 775 NVIVTAHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLSACSHGGLIEEG---YYHFTS 831
Query: 328 MGFDSNVPVCNA----ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
MG + + ++ + A+ L A + +++ A V W ++++AC +
Sbjct: 832 MGREFGIAGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYVLWMTLLSACKVQGDEK 891
Query: 384 ELFRLFSRML 393
R+ R++
Sbjct: 892 RAKRVAERVM 901
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 95/180 (52%), Gaps = 6/180 (3%)
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D TF ++G CAK +++ +H + + D V N + +Y KCG + A +F
Sbjct: 1 DRGTFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVF 60
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+++P VSW+SL+ +A+ G +A ++F RM+ G++P+ +T V VL C+ G +
Sbjct: 61 QSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLS 120
Query: 520 EG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
G LH + + E G+ + ++ + + GCV +A +++A D+V W S++
Sbjct: 121 RGKLLHGFVL---EAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQ-DVVSWTSMI 176
>gi|225459473|ref|XP_002284396.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Vitis vinifera]
Length = 690
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 178/617 (28%), Positives = 283/617 (45%), Gaps = 81/617 (13%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
+I C R+ + GR +H HI+ DV N++L MY L+DAR FD+ +RN
Sbjct: 9 VIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLFDETLERN 68
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
V +WT MI+ S + + + A+K Y+QML+S P F + +++KAC +G + G+ +H
Sbjct: 69 VATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGDLESGKLIH 128
Query: 160 AHVIKSEHGSHLIAQNALIAMYTK----------FDRIL--------------------- 188
V ++ G + N L+ MY K FD IL
Sbjct: 129 GRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEGLME 188
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
+A N+F + D SW S+IA F L AL F M+H + + F F C
Sbjct: 189 EAVNLFYQMPEPDTVSWNSIIAGFG-CKESLGAL-RFVCMMHRKGLKLDGFTFSCALKTC 246
Query: 249 SNFARILF------------------------------NEIDSPD--------------- 263
F ++ NE+D
Sbjct: 247 GCFQLLVMVKQIHCYVNKSGFGSCCFTASALVDSYSNCNELDEAIKMFDEYSCCSASILD 306
Query: 264 -LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
L WN++++G + + A++L S++ D T S L CI G+QV
Sbjct: 307 CLPLWNSMLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFGSALKVCINLQNFRLGLQVQ 366
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ G++ + V + ++ +YA + +AL +F L + D V W+S+I+ C +
Sbjct: 367 GLAVTSGYELDYVVGSILIDLYANDGKIKDALRLFYRLPEK-DIVVWSSLISWCTKMGLN 425
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
+F LF M+ I+ D + V+ AC+ + L Q+H + K+G + + L
Sbjct: 426 SLVFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKSGYESERITVTSL 485
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y KCG + LF D V ++ +I+G Q G EA+ F M LG+ PN
Sbjct: 486 IDLYAKCGEIEDGLALFYCTSERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLKPNE 545
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
+T +GVL+AC H GLVEE +++ M+ EY + P EH C+V+LL++AGC EAE+ I
Sbjct: 546 ITFLGVLSACRHAGLVEEAWTIFKYMKTEYKMEPHIEHYYCIVELLSQAGCFKEAEELIA 605
Query: 563 QMACDADIVVWKSLLAS 579
+M + D +W SLL +
Sbjct: 606 EMPFEPDQTIWNSLLGA 622
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/506 (24%), Positives = 206/506 (40%), Gaps = 83/506 (16%)
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
S+I+ C + GR LHAH+IK + + N L+AMY + DAR +F +
Sbjct: 8 SVIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLFDETLER 67
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS----------- 249
+V +W +MI+A+S G AL + +ML + PN F++ +V AC
Sbjct: 68 NVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGDLESGKLI 127
Query: 250 -----------------------------NFARILFNEIDSPDLASWNALIAGVASHSNA 280
+ AR +F++I P SWN +I+G
Sbjct: 128 HGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEGLM 187
Query: 281 NEAMSLFSEMRD------------------------------RELLPDGLTVHSLL--CA 308
EA++LF +M + + L DG T L C
Sbjct: 188 EEAVNLFYQMPEPDTVSWNSIIAGFGCKESLGALRFVCMMHRKGLKLDGFTFSCALKTCG 247
Query: 309 CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV- 367
C L + + Q+H Y+ K GF S +A++ Y+ C+ L A+ +F E + S+
Sbjct: 248 CFQLLVMVK--QIHCYVNKSGFGSCCFTASALVDSYSNCNELDEAIKMFDEYSCCSASIL 305
Query: 368 ----SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
WNS+++ + + Q L S++ + D TF + C + + + Q+
Sbjct: 306 DCLPLWNSMLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFGSALKVCINLQNFRLGLQV 365
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
+G D V + L+D+Y G + A +LF + D+V WSSLI + G
Sbjct: 366 QGLAVTSGYELDYVVGSILIDLYANDGKIKDALRLFYRLPEKDIVVWSSLISWCTKMGLN 425
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
LF M +L + + + VL ACS + + G ++ G R +
Sbjct: 426 SLVFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKS-GYESERITVTS 484
Query: 544 VVDLLARAGCVHEAEDFINQMACDAD 569
++DL A+ G E ED + C ++
Sbjct: 485 LIDLYAKCG---EIEDGLALFYCTSE 507
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 125/519 (24%), Positives = 215/519 (41%), Gaps = 88/519 (16%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD--- 94
Y+ ++ AC + L+ G+ +H + + D VL N +L+MY KCGSL AR FD
Sbjct: 108 YSAVLKACGLVGDLESGKLIHGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDIL 167
Query: 95 ----------------------------KMPQRNVVSWTAMIA--GCSQNYQENDAIKLY 124
+MP+ + VSW ++IA GC ++ A++
Sbjct: 168 CPSSTSWNTMISGYGKEGLMEEAVNLFYQMPEPDTVSWNSIIAGFGCKESL---GALRFV 224
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
M + G+ FTF +K C + + +Q+H +V KS GS +AL+ Y+
Sbjct: 225 CMMHRKGLKLDGFTFSCALKTCGCFQLLVMVKQIHCYVNKSGFGSCCFTASALVDSYSNC 284
Query: 185 DRILDARNVF------SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
+ + +A +F S + W SM++ + + + A + +H +
Sbjct: 285 NELDEAIKMFDEYSCCSASILDCLPLWNSMLSGYV-VNEQNSAAINLVSQIHSLGAHVDS 343
Query: 239 FIFGSVFSACSNF----------------------------------------ARILFNE 258
F FGS C N A LF
Sbjct: 344 FTFGSALKVCINLQNFRLGLQVQGLAVTSGYELDYVVGSILIDLYANDGKIKDALRLFYR 403
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ D+ W++LI+ + SLF +M + ++ D + S+L AC + L G
Sbjct: 404 LPEKDIVVWSSLISWCTKMGLNSLVFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGSG 463
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
QVHS+ +K G++S +++ +YAKC + + L +F D+V + II C Q
Sbjct: 464 KQVHSFCVKSGYESERITVTSLIDLYAKCGEIEDGLALFY-CTSERDTVCYTGIIMGCGQ 522
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+ +A E F M+ +KP+ ITF V+ AC +E + Y+ KT + +
Sbjct: 523 NGRAMEAVGFFQEMIELGLKPNEITFLGVLSACRHAGLVEEAWTIFKYM-KTEYKMEPHI 581
Query: 439 MN--GLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
+ ++++ + G A +L M PD W+SL+
Sbjct: 582 EHYYCIVELLSQAGCFKEAEELIAEMPFEPDQTIWNSLL 620
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 140/283 (49%), Gaps = 14/283 (4%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ + C +L++ +LG +V + S + D V+ + ++++Y G ++DA F ++
Sbjct: 345 TFGSALKVCINLQNFRLGLQVQGLAVTSGYELDYVVGSILIDLYANDGKIKDALRLFYRL 404
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P++++V W+++I+ C++ + L+ M+ + QF S++KACS L + G+
Sbjct: 405 PEKDIVVWSSLISWCTKMGLNSLVFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGSGK 464
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H+ +KS + S I +LI +Y K I D +F + +D + +I + G
Sbjct: 465 QVHSFCVKSGYESERITVTSLIDLYAKCGEIEDGLALFYCTSERDTVCYTGIIMGCGQNG 524
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-----ARILFNEIDS-----PDLAS 266
+EA+ F EM+ G +PNE F V SAC + A +F + + P +
Sbjct: 525 RAMEAVGFFQEMIELG-LKPNEITFLGVLSACRHAGLVEEAWTIFKYMKTEYKMEPHIEH 583
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+ ++ ++ EA L +EM PD +SLL AC
Sbjct: 584 YYCIVELLSQAGCFKEAEELIAEM---PFEPDQTIWNSLLGAC 623
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 169/412 (41%), Gaps = 48/412 (11%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+++ T++ + C + L + +++H ++ S + +++ Y C L++A
Sbjct: 232 LKLDGFTFSCALKTCGCFQLLVMVKQIHCYVNKSGFGSCCFTASALVDSYSNCNELDEAI 291
Query: 91 MGFDKMP--QRNVVS----WTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
FD+ +++ W +M++G N Q + AI L Q+ G FTFGS +K
Sbjct: 292 KMFDEYSCCSASILDCLPLWNSMLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFGSALK 351
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
C L + LG Q+ + S + + + LI +Y +I DA +F + KD+
Sbjct: 352 VCINLQNFRLGLQVQGLAVTSGYELDYVVGSILIDLYANDGKIKDALRLFYRLPEKDIVV 411
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------ 252
W S+I+ +K+G F +M++ + ++FI SV ACS+
Sbjct: 412 WSSLISWCTKMGLNSLVFSLFRDMVNLDI-EVDQFIISSVLKACSSLVGLGSGKQVHSFC 470
Query: 253 --------RI--------------------LFNEIDSPDLASWNALIAGVASHSNANEAM 284
RI LF D + +I G + A EA+
Sbjct: 471 VKSGYESERITVTSLIDLYAKCGEIEDGLALFYCTSERDTVCYTGIIMGCGQNGRAMEAV 530
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI-IKMGFDSNVPVCNAILTM 343
F EM + L P+ +T +L AC + + + Y+ + + ++ I+ +
Sbjct: 531 GFFQEMIELGLKPNEITFLGVLSACRHAGLVEEAWTIFKYMKTEYKMEPHIEHYYCIVEL 590
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
++ A + E+ D WNS++ AC H + E + + R+L +
Sbjct: 591 LSQAGCFKEAEELIAEMPFEPDQTIWNSLLGACGTHKKTELVNFIAERLLTT 642
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 154/481 (32%), Positives = 256/481 (53%), Gaps = 46/481 (9%)
Query: 140 GSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR 199
GS+I CS ++ G LHA IK+ S +I N ++ +Y K ++ +AR VF ++
Sbjct: 7 GSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSE 66
Query: 200 KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------- 251
+++ SW +MI+ + ++G + AL F+++ PNE+++ SV SAC++
Sbjct: 67 RNLVSWSAMISGYEQIGEPISALGLFSKL----NIVPNEYVYASVISACASLKGLVQGKQ 122
Query: 252 --------------------------------ARILFNEIDSPDLASWNALIAGVASHSN 279
A + +NE + ++NALI G +
Sbjct: 123 IHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQ 182
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
++ + M PD T LL C R L +G +H IK+ +S + N
Sbjct: 183 PDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNL 242
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS-QIK 398
I+TMY+K ++L A F+ + + D +SWN+ I++C N E+ F ML +++
Sbjct: 243 IITMYSKLNLLEEAEKAFRSI-EEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVR 301
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
PD TF + AC+ +AS+ Q+H ++ +T L DV N L+++Y KCG + A +
Sbjct: 302 PDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYI 361
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
F+ ME+ ++VSW+++I G+ G G +A +LF +M+++GV P+ VT VG+LTA +H GLV
Sbjct: 362 FSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLV 421
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+EGL + ME YGI P EH SC++DLL RAG ++EA++++ + D VV SLL+
Sbjct: 422 DEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSLLS 481
Query: 579 S 579
+
Sbjct: 482 A 482
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/489 (26%), Positives = 230/489 (47%), Gaps = 60/489 (12%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P LI CS ++L+ G +H + + + DV++ NHILN+Y KC L +AR FD
Sbjct: 3 PELVGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFD 62
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+M +RN+VSW+AMI+G Q + A+ L+ ++ ++P ++ + S+I AC+ L +
Sbjct: 63 EMSERNLVSWSAMISGYEQIGEPISALGLFSKL---NIVPNEYVYASVISACASLKGLVQ 119
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+Q+H +K S NALI MY K + DA ++ + ++ ++I F +
Sbjct: 120 GKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVE 179
Query: 215 -----LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------ 251
G+E+ M++ + P+ F F + C++
Sbjct: 180 NQQPDKGFEVL------RMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKL 233
Query: 252 ----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
A F I+ DL SWN I+ + ++ +A+ F E
Sbjct: 234 NSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKE 293
Query: 290 MRDR-ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
M + + PD T S L AC G ++ G Q+H ++I+ +V NA++ MYAKC
Sbjct: 294 MLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCG 353
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ A +F ++ ++ + VSWN++IA H + F LF++M +KPD +TF ++
Sbjct: 354 CIAKAYYIFSKM-EHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLL 412
Query: 409 GACAKMASL--EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK-LFNFMENP 465
A + A L E + + G++ ++ + L+D+ + G L A++ + F
Sbjct: 413 TA-SNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGH 471
Query: 466 DVVSWSSLI 474
D V SL+
Sbjct: 472 DTVVLGSLL 480
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 180/405 (44%), Gaps = 42/405 (10%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
NI YA +ISAC+SL+ L G+++H L + N ++ MY KCG DA
Sbjct: 96 NIVPNEYVYASVISACASLKGLVQGKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDA 155
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
+ +++ + N V++ A+I G +N Q + ++ M Q G P +FTF ++ C+
Sbjct: 156 LLAYNEALELNPVAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSR 215
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
+ G LH IK + S N +I MY+K + + +A F I KD+ SW + I
Sbjct: 216 DDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFI 275
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------------- 254
++ S +AL F EML+ +P+EF F S +ACS A +
Sbjct: 276 SSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRL 335
Query: 255 -------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
+F++++ +L SWN +IAG +H +A LF++
Sbjct: 336 YQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAK 395
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGM-QVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
M+ + PD +T LL A + +G+ +S G + + ++ + +
Sbjct: 396 MKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAG 455
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
L A K+ D+V S+++AC H + + F+R L
Sbjct: 456 RLNEAKEYMKKFPFGHDTVVLGSLLSACRLHGDVDT-GKCFARQL 499
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 135/282 (47%), Gaps = 14/282 (4%)
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
V SL+ C L QG+ +H+ IK S+V V N IL +YAKC L A VF E+
Sbjct: 6 VGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMS 65
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
+ + VSW+++I+ Q + LFS++ I P+ + V+ ACA + L
Sbjct: 66 ER-NLVSWSAMISGYEQIGEPISALGLFSKL---NIVPNEYVYASVISACASLKGLVQGK 121
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
Q+H K GL FV N L+ +Y+KCG A +N + V++++LI G+ +
Sbjct: 122 QIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQ 181
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY----RIMENEYGIIPT 537
D+ ++ M G P+ T VG+L C+ ++ G L+ ++ N I
Sbjct: 182 QPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIG- 240
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++ + ++ + EAE + + D++ W + ++S
Sbjct: 241 ----NLIITMYSKLNLLEEAEKAFRSIE-EKDLISWNTFISS 277
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 80/150 (53%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++SS N + +AL A+ N +R T+A ++ACS L S+ G+++H H++
Sbjct: 272 NTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLI 331
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ DV N ++NMY KCG + A F KM +N+VSW MIAG + A +
Sbjct: 332 RTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFE 391
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
L+ +M GV P TF ++ A + G V
Sbjct: 392 LFAKMKTMGVKPDSVTFVGLLTASNHAGLV 421
>gi|225457861|ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Vitis vinifera]
Length = 685
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 282/542 (52%), Gaps = 64/542 (11%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D N +++ + K G+LE AR F++MP +N ++W +MI G + N + +A+ L+ +
Sbjct: 103 DAFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLS 162
Query: 129 QSGVMP---GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+ + F +++ AC+ LG++ G+Q+HA ++ E + ++L+ +Y K
Sbjct: 163 LNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCG 222
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I A +V + + D S ++I+ ++ G +A +F
Sbjct: 223 DIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDAR--------------------RIF 262
Query: 246 SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
SN +L WN++I+G +++ A EA+ LF+ MR + + D T S+
Sbjct: 263 CLKSNACVVL-----------WNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASV 311
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC-----------------S 348
L AC + QG+QVH+++ K+GF +++ + +A++ MY+KC +
Sbjct: 312 LSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDT 371
Query: 349 VLCNALL-VFKELGKNADS------------VSWNSIIAACLQHNQAEELFRLFSRMLAS 395
+L N+++ V+ G+ D+ +SWNS+I Q+ E LF M
Sbjct: 372 ILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKL 431
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA 455
++ D + V+ ACA ++SLE+ Q+ T GL FD + L+D Y KCG +
Sbjct: 432 GLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHG 491
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
RKLF+ M D V W+S+++GYA G G EAL +F +MRS+GV P +T VGVL+AC H
Sbjct: 492 RKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHC 551
Query: 516 GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
GLVEEG + M+ +Y I P EH SC+VDL ARAG + +A + I QM AD +W S
Sbjct: 552 GLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSS 611
Query: 576 LL 577
+L
Sbjct: 612 VL 613
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 240/508 (47%), Gaps = 83/508 (16%)
Query: 143 IKACSGLGSVCLGRQLHAHVIKSE--HGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
+ +C+ GS+ GR LH +KS H S L N L+ MY++ + + +A+ +F + ++
Sbjct: 13 LGSCNNYGSIYRGRLLHILFLKSGVLH-SVLSIGNRLLQMYSRCNSMREAQQLFEEMPKR 71
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEID 260
+ SW +MI + K G + ++L F+ M H A+ N I G AR LFNE+
Sbjct: 72 NCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRLFNEMP 131
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP------DGLTVHSLLCACIGRLT 314
+ +WN++I G A + EA+ LF +D L P D + +++ AC
Sbjct: 132 WKNGIAWNSMIHGYACNGRPKEAVGLF---KDLSLNPLERFCGDTFVLATVVGACTNLGA 188
Query: 315 LYQGMQVHSYII--KMGFDS--------------NVPVCNAILTM--------------- 343
L G Q+H+ I+ ++ FDS ++ N +L +
Sbjct: 189 LDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISG 248
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
YA C + +A +F L NA V WNS+I+ + +N+A E LF+ M ++ D+ T
Sbjct: 249 YASCGRMNDARRIFC-LKSNACVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYST 307
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGL------------------------------- 432
F V+ AC+ + ++ Q+H ++ K G
Sbjct: 308 FASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQ 367
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
A+D ++N ++ +Y CG + AR++F+ M + ++SW+S+I+G++Q C EAL LF
Sbjct: 368 AYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCE 427
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY---RIMENEYGIIPTREHCSCVVDLLA 549
M LG+ + +L GV++AC+ + +E G ++ I+ E+ I + + +VD
Sbjct: 428 MNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIIS----TSLVDFYC 483
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLL 577
+ G V ++M +D V W S+L
Sbjct: 484 KCGLVEHGRKLFDRMM-KSDEVPWNSML 510
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 197/445 (44%), Gaps = 106/445 (23%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS------------- 85
A ++ AC++L +L G+++H I++ + + D VL + ++N+YGKCG
Sbjct: 177 ATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKE 236
Query: 86 ------------------LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
+ DAR F VV W +MI+G N + +A++L+ M
Sbjct: 237 PDAFSLSALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNNM 296
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK---- 183
+ GV TF S++ ACS LG + G Q+HAHV K + +I +AL+ MY+K
Sbjct: 297 RRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRP 356
Query: 184 ------------FDRIL---------------DARNVFSGIARKDVTSWGSMIAAFSKLG 216
+D IL DAR +F + K + SW SMI FS+
Sbjct: 357 DDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNA 416
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------------------ 252
+EAL F EM G + ++F V SAC++ +
Sbjct: 417 CPIEALDLFCEMNKLG-LRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIIS 475
Query: 253 ----------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
R LF+ + D WN+++ G A++ + EA+++F +MR +
Sbjct: 476 TSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQ 535
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV--CNAILTMYAKCSVLCNAL 354
P +T +L AC L + + Y +K+ + N + + ++ +YA+ +L +A+
Sbjct: 536 PTDITFVGVLSAC-DHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAM 594
Query: 355 LVFKELGKNADSVSWNSIIAACLQH 379
+ +++ AD+ W+S++ C+ H
Sbjct: 595 NLIEQMPLKADTSMWSSVLRGCVAH 619
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 161/356 (45%), Gaps = 47/356 (13%)
Query: 16 NEALVAYDFSQN--NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI------------ 61
NEAL A + N ++ ST+A ++SACS+L + G +VH H+
Sbjct: 284 NEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIID 343
Query: 62 -----LLSKCQP--------------DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVV 102
+ SKC+ D +L N ++ +Y CG ++DAR FD MP ++++
Sbjct: 344 SALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLI 403
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
SW +MI G SQN +A+ L+ +M + G+ +F+ +I AC+ + S+ LG Q+ A
Sbjct: 404 SWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARA 463
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL 222
I +L+ Y K + R +F + + D W SM+ ++ G+ +EAL
Sbjct: 464 TIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEAL 523
Query: 223 CHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARILFNEIDSPDLASWNALIA 272
F++M G QP + F V SAC + F + + +P + ++ ++
Sbjct: 524 NVFDQMRSVGV-QPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVD 582
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
A +AM+L +M L D S+L C+ G +V II +
Sbjct: 583 LYARAGLLEDAMNLIEQM---PLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDL 635
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 282/542 (52%), Gaps = 64/542 (11%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D N +++ + K G+LE AR F++MP +N ++W +MI G + N + +A+ L+ +
Sbjct: 103 DAFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLS 162
Query: 129 QSGVMP---GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+ + F +++ AC+ LG++ G+Q+HA ++ E + ++L+ +Y K
Sbjct: 163 LNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCG 222
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I A +V + + D S ++I+ ++ G +A +F
Sbjct: 223 DIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDAR--------------------RIF 262
Query: 246 SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
SN +L WN++I+G +++ A EA+ LF+ MR + + D T S+
Sbjct: 263 CLKSNXCVVL-----------WNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASV 311
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC-----------------S 348
L AC + QG+QVH+++ K+GF +++ + +A++ MY+KC +
Sbjct: 312 LSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDT 371
Query: 349 VLCNALL-VFKELGKNADS------------VSWNSIIAACLQHNQAEELFRLFSRMLAS 395
+L N+++ V+ G+ D+ +SWNS+I Q+ E LF M
Sbjct: 372 ILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKL 431
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA 455
++ D + V+ ACA ++SLE+ Q+ T GL FD + L+D Y KCG +
Sbjct: 432 GLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHG 491
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
RKLF+ M D V W+S+++GYA G G EAL +F +MRS+GV P +T VGVL+AC H
Sbjct: 492 RKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHC 551
Query: 516 GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
GLVEEG + M+ +Y I P EH SC+VDL ARAG + +A + I QM AD +W S
Sbjct: 552 GLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSS 611
Query: 576 LL 577
+L
Sbjct: 612 VL 613
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 137/446 (30%), Positives = 234/446 (52%), Gaps = 40/446 (8%)
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
+LI+ N + + +F + AR+VF + ++DV SW +MI+ + G +A F+EM
Sbjct: 775 NLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQ 834
Query: 230 HHGAYQPNEFIFGS----VFSACS----------------------------------NF 251
G +P+ F + + V SAC ++
Sbjct: 835 KAGI-RPSGFTYSTLLSFVSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDY 893
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
A +F ++ D+ SWN+LI N A+ F MR PD TV +++ C
Sbjct: 894 AFGVFITMEELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSN 953
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
L +G Q+ + I++GF SN V +A + +++KC+ L +++ VF+E+ + DSV N+
Sbjct: 954 LQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQ-WDSVLCNA 1012
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+I++ H E +LF L ++P T + V+ A + + ++ +Q+H + K+G
Sbjct: 1013 MISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSG 1072
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
L DV V + L+++Y K G + SA K F + D++SW+++I+G A G +AL++F
Sbjct: 1073 LESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFK 1132
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
+ G P+ +TL GVL AC+ GLV+EGL ++ ME EYG+IP EH +C+VD+++R
Sbjct: 1133 ELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRG 1192
Query: 552 GCVHEAEDFINQMACDADIVVWKSLL 577
G + EA D + M + ++W SLL
Sbjct: 1193 GKLKEAMDIVELMPHEPSGLIWGSLL 1218
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 136/506 (26%), Positives = 238/506 (47%), Gaps = 83/506 (16%)
Query: 145 ACSGLGSVCLGRQLHAHVIKSE--HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
+C+ GS+ GR LH +KS H S L N L+ MY++ + + +A+ +F + +++
Sbjct: 15 SCNNYGSIYRGRXLHILFLKSGVLH-SVLSIGNRLLQMYSRCNSMREAQQLFEEMPKRNC 73
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSP 262
SW +MI + K G + ++L F+ M H A+ N I G AR LFNE+
Sbjct: 74 FSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRLFNEMPWK 133
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLP------DGLTVHSLLCACIGRLTLY 316
+ +WN++I G A + EA+ LF +D L P D + +++ AC L
Sbjct: 134 NGIAWNSMIHGYACNGRPKEAVGLF---KDLSLNPLERFCGDTFVLATVVGACTNLGALD 190
Query: 317 QGMQVHSYII--KMGFDS--------------NVPVCNAILTM---------------YA 345
G Q+H+ I+ ++ FDS ++ N +L + YA
Sbjct: 191 CGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYA 250
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
C + +A +F L N V WNS+I+ + +N+A E LF+ M ++ D+ TF
Sbjct: 251 SCGRMNDARRIFC-LKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFA 309
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGL-------------------------------AF 434
V+ AC+ + ++ Q+H ++ K G A+
Sbjct: 310 SVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAY 369
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
D ++N ++ +Y CG + AR++F+ M + ++SW+S+I+G++Q C EAL LF M
Sbjct: 370 DTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMN 429
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLY---RIMENEYGIIPTREHCSCVVDLLARA 551
LG+ + +L GV++AC+ + +E G ++ I+ E+ I + + +VD +
Sbjct: 430 KLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIIS----TSLVDFYCKC 485
Query: 552 GCVHEAEDFINQMACDADIVVWKSLL 577
G V ++M +D V W S+L
Sbjct: 486 GLVEHGRKLFDRMM-KSDEVPWNSML 510
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 230/492 (46%), Gaps = 58/492 (11%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGR-----KVHDHILLSKCQPDVVLQNHILNMYGKCGS 85
I++ +T+ L + C L S QLG +V + I+ +++ N L + + G
Sbjct: 737 IKVGFNTHTFLGNRCLDLYS-QLGTGNDSLRVFEDII----DKNLISWNIFLKAFVRFGE 791
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
LE AR FD+MP+R+VVSW MI+G +DA + + +M ++G+ P FT+ +++
Sbjct: 792 LERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLL-- 849
Query: 146 CSGLGSVCLGRQLHAHVIKSEHG-SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
S + S C G+Q+HA +I++ S+++ N+LI MY KF + A VF + D+ S
Sbjct: 850 -SFVSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIIS 908
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------- 254
W S+I + K GY+ AL F M G Y P++F +V + CSN +
Sbjct: 909 WNSLIWSCGKSGYQNLALRQFVLMRSVG-YSPDQFTVSTVITVCSNLQDLEKGEQIFALC 967
Query: 255 ------------------------------LFNEIDSPDLASWNALIAGVASHSNANEAM 284
+F EI D NA+I+ A H A+
Sbjct: 968 IRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENAL 1027
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
LF L P T+ +L A L + QG Q+HS ++K G +S+V V ++++ MY
Sbjct: 1028 QLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMY 1087
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
AK ++ +A+ F ++G D +SWN++I + + + +F +L PD IT
Sbjct: 1088 AKFGLIDSAMKTFAKIGAR-DLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITL 1146
Query: 405 NDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
V+ AC ++ + + K G+ + ++D+ + G L A + M
Sbjct: 1147 AGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMP 1206
Query: 464 N-PDVVSWSSLI 474
+ P + W SL+
Sbjct: 1207 HEPSGLIWGSLL 1218
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 151/649 (23%), Positives = 273/649 (42%), Gaps = 102/649 (15%)
Query: 16 NEALVAYDFSQN--NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI------------ 61
NEAL A + N ++ ST+A ++SACS+L + G +VH H+
Sbjct: 284 NEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIID 343
Query: 62 -----LLSKCQP--------------DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVV 102
+ SKC+ D +L N ++ +Y CG ++DAR FD MP ++++
Sbjct: 344 SALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLI 403
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
SW +MI G SQN +A+ L+ +M + G+ +F+ +I AC+ + S+ LG Q+ A
Sbjct: 404 SWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARA 463
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL 222
I +L+ Y K + R +F + + D W SM+ ++ G+ +EAL
Sbjct: 464 TIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEAL 523
Query: 223 CHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARILFNEIDSPDLASWNALIA 272
F++M G QP + F V SAC + F + + +P + ++ ++
Sbjct: 524 NVFDQMRSVGV-QPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVD 582
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
A +AM+L +M L D S+L C+ G +V II +
Sbjct: 583 LYARAGLLEDAMNLIEQM---PLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLD-PE 638
Query: 333 NVPVCNAILTMYAKC-----SVLCNALLVFKELGKN-----ADSVSWNSIIAACLQHNQA 382
N + +YA S L+ K++ K+ A + + + +
Sbjct: 639 NSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKDTSFDIAGEEGXEGLSSETKEVTKM 698
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL----HCYI--------TKT 430
++ L R++A + + M A + +M+ ++ H ++ ++
Sbjct: 699 KQRQNLVLRLVAEKKRECDERDQKFMAARRTLLEFDMLIKVGFNTHTFLGNRCLDLYSQL 758
Query: 431 GLAFD------------VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
G D + N + +++ G L AR +F+ M DVVSW+++I GY
Sbjct: 759 GTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYV 818
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS--------HVGLVEEGLHLYRIMEN 530
FG D+A + F+ M+ G+ P+ T +L+ S H ++ G+ L ++
Sbjct: 819 SFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSACRGKQIHASMIRNGVDLSNVVVG 878
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++ + + G V A M + DI+ W SL+ S
Sbjct: 879 -----------NSLIGMYGKFGVVDYAFGVFITME-ELDIISWNSLIWS 915
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 135/542 (24%), Positives = 251/542 (46%), Gaps = 49/542 (9%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
N +R+ + AG+ISAC+S+ SL+LG ++ + + D ++ +++ Y KCG +
Sbjct: 429 NKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLV 488
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
E R FD+M + + V W +M+ G + N +A+ ++ QM GV P TF ++ AC
Sbjct: 489 EHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSAC 548
Query: 147 SGLGSVCLGRQ-LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK-DVTS 204
G V GR+ +A + + + ++ +Y + + DA N+ + K D +
Sbjct: 549 DHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSM 608
Query: 205 WGSMIAA-----FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS-ACSNFARILFNE 258
W S++ + LG ++ + + GAY I+ + S R L +
Sbjct: 609 WSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYD 668
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR----LT 314
P S++ IAG + ++M+ R+ L L C R +
Sbjct: 669 KKIPKDTSFD--IAGEEGXEGLSSETKEVTKMKQRQNLVLRLVAEKKR-ECDERDQKFMA 725
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE-LGKN---------- 363
+ + +IK+GF+++ + N L +Y++ ++L VF++ + KN
Sbjct: 726 ARRTLLEFDMLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKA 785
Query: 364 -------------------ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
D VSWN++I+ + ++ FR FS M + I+P T+
Sbjct: 786 FVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTY 845
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAF-DVFVMNGLMDIYIKCGSLGSARKLFNFME 463
+ ++ + ++S Q+H + + G+ +V V N L+ +Y K G + A +F ME
Sbjct: 846 STLL---SFVSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITME 902
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
D++SW+SLI + G + AL+ F MRS+G SP+ T+ V+T CS++ +E+G
Sbjct: 903 ELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQ 962
Query: 524 LY 525
++
Sbjct: 963 IF 964
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 197/445 (44%), Gaps = 106/445 (23%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS------------- 85
A ++ AC++L +L G+++H I++ + + D VL + ++N+YGKCG
Sbjct: 177 ATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKE 236
Query: 86 ------------------LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
+ DAR F VV W +MI+G N + +A++L+ M
Sbjct: 237 PDAFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNM 296
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK---- 183
+ GV TF S++ ACS LG + G Q+HAHV K + +I +AL+ MY+K
Sbjct: 297 RRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRP 356
Query: 184 ------------FDRIL---------------DARNVFSGIARKDVTSWGSMIAAFSKLG 216
+D IL DAR +F + K + SW SMI FS+
Sbjct: 357 DDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNA 416
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------------------ 252
+EAL F EM G + ++F V SAC++ +
Sbjct: 417 CPIEALDLFCEMNKLG-LRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIIS 475
Query: 253 ----------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
R LF+ + D WN+++ G A++ + EA+++F +MR +
Sbjct: 476 TSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQ 535
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV--CNAILTMYAKCSVLCNAL 354
P +T +L AC L + + Y +K+ + N + + ++ +YA+ +L +A+
Sbjct: 536 PTDITFVGVLSAC-DHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAM 594
Query: 355 LVFKELGKNADSVSWNSIIAACLQH 379
+ +++ AD+ W+S++ C+ H
Sbjct: 595 NLIEQMPLKADTSMWSSVLRGCVAH 619
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 201/442 (45%), Gaps = 55/442 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N +S L+++A + F IRPS TY+ L+S SS G+++H
Sbjct: 811 NTMISGYVSFGLFDDA---FRFFSEMQKAGIRPSGFTYSTLLSFVSSACR---GKQIHAS 864
Query: 61 ILLSKCQ-PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
++ + +VV+ N ++ MYGK G ++ A F M + +++SW ++I C ++ +N
Sbjct: 865 MIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWSCGKSGYQNL 924
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
A++ ++ M G P QFT ++I CS L + G Q+ A I+ S+ I +A I
Sbjct: 925 ALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASID 984
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
+++K +R+ D+ VF I + D +MI++++ G+ AL F L +P EF
Sbjct: 985 LFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLREN-LRPTEF 1043
Query: 240 IFGSVFSACS----------------------------------------NFARILFNEI 259
V SA S + A F +I
Sbjct: 1044 TLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKI 1103
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC-IGRLTLYQG 318
+ DL SWN +I G+A + ++A+ +F E+ PD +T+ +L AC +G L + +G
Sbjct: 1104 GARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGL-VDEG 1162
Query: 319 MQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
+ + S + K G + I+ M ++ L A+ + + + + W S++ AC
Sbjct: 1163 LSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACE 1222
Query: 378 QHNQAEELFRLFSRMLASQIKP 399
+ R+ R++ +++P
Sbjct: 1223 IYGDLRFTERVAERVM--ELEP 1242
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 162/349 (46%), Gaps = 17/349 (4%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T + +I+ CS+L+ L+ G ++ + + ++ + ++++ KC LED+ F+++
Sbjct: 943 TVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEI 1002
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
Q + V AMI+ + + +A++L++ L+ + P +FT ++ A S L V G
Sbjct: 1003 YQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGS 1062
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H+ V+KS S +I ++L+ MY KF I A F+ I +D+ SW +MI + G
Sbjct: 1063 QIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNG 1122
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS-----PDLAS 266
+AL F E+L G P+E V AC+ + +F+ ++ P +
Sbjct: 1123 RVSKALEIFKELLIGGP-PPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEH 1181
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
+ ++ ++ EAM + M P GL SLLCAC L +V ++
Sbjct: 1182 YACIVDMMSRGGKLKEAMDIVELMPHE---PSGLIWGSLLCACEIYGDLRFTERVAERVM 1238
Query: 327 KMGFDSNVP--VCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSI 372
++ S++P V M + L KE G + SW I
Sbjct: 1239 ELEPQSSLPYLVLAQAYEMRGRWESLVRVXRAMKEKGVRKVIGCSWIGI 1287
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 168/588 (28%), Positives = 294/588 (50%), Gaps = 43/588 (7%)
Query: 34 RPST--YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+P T + L+ CSS +++ GR+VH H+ + + ++ H++ MY +CGS+ +A+
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
F+ + +++V +WT MI Q + A+ ++ QM + VMP + T+ +I+ AC+ S
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ G ++H +++ + ALI MY K + A + F + +DV SW +MIAA
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180
Query: 212 FSKLGYELEALCHFNEMLHHG-------------AY-QPN-----EFIFGSVFS------ 246
+ A + M G AY PN +F++G V S
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESD 240
Query: 247 ------ACSNF--------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
A + F AR LF ++ D+ +WN +I + N EA+ LF ++
Sbjct: 241 VRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQ 300
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ + +T +L +L +G +H + + G+D + V A++++Y +C
Sbjct: 301 DGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQ 360
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A +F ++G + D ++W + A Q+ +E +LF M +P T V+ CA
Sbjct: 361 AWKIFVDMG-SKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCA 419
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+A+L+ Q+H +I + ++ V L+++Y KCG + A +F M D++ W+S
Sbjct: 420 HLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNS 479
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
++ YAQ G DE L+LF +M+ GV + V+ V VL+A SH G V +G + M ++
Sbjct: 480 MLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDF 539
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMA-CDADIVVWKSLLAS 579
I PT E CVVDLL RAG + EA D + +++ C D ++W +LL +
Sbjct: 540 SITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGA 587
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 147/283 (51%), Gaps = 13/283 (4%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +++ +SL SL G+ +H+ + + D V+ ++++YG+C + A F M
Sbjct: 309 TFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDM 368
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++V++WT M +QN +A++L+ +M G P T +++ C+ L ++ GR
Sbjct: 369 GSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGR 428
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H+H+I++ ++ + ALI MY K ++ +A +VF +A++D+ W SM+ A+++ G
Sbjct: 429 QIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHG 488
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARILFNEIDSPDLAS 266
Y E L FN+M G + + F SV SA S+ F +L + +P
Sbjct: 489 YYDETLQLFNQMQLDGV-KADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPEL 547
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+ ++ + EA+ + ++ LPDG+ +LL AC
Sbjct: 548 YGCVVDLLGRAGRIQEAVDIVLKLSG--CLPDGILWMTLLGAC 588
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 167/379 (44%), Gaps = 49/379 (12%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
L G+ V+ + + DV + N +NM+G G L DAR F+ M R+VV+W +I
Sbjct: 222 LSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITL 281
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
QN +A++L+ ++ Q GV TF ++ + L S+ G+ +H V ++ +
Sbjct: 282 YVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRD 341
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
+ AL+++Y + + A +F + KDV +W M A+++ G+ EAL F EM
Sbjct: 342 AVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQL 401
Query: 231 HGAYQPNEFIFGSVFSACSNFARI------------------------------------ 254
G +P +V C++ A +
Sbjct: 402 EGR-RPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMA 460
Query: 255 ----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+F ++ D+ WN+++ A H +E + LF++M+ + D ++ S+L A
Sbjct: 461 EAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALS 520
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNV----PVCNAILTMYAKCSVLCNAL-LVFKELGKNAD 365
++ G Q Y + M D ++ + ++ + + + A+ +V K G D
Sbjct: 521 HSGSVTDGYQ---YFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPD 577
Query: 366 SVSWNSIIAACLQHNQAEE 384
+ W +++ AC HN+ ++
Sbjct: 578 GILWMTLLGACRTHNKTDQ 596
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 167/564 (29%), Positives = 293/564 (51%), Gaps = 53/564 (9%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-- 99
+ AC L S + G H I + + +V + N ++ MY + GSLEDA + FD++ ++
Sbjct: 156 LKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGI 215
Query: 100 -NVVSWTAMIAGCSQNYQENDAIKLYIQMLQ------SGVMPGQFTFGSIIKACSGLGSV 152
+V+SW +++A + A+ L+ +M + + +I+ AC+ L ++
Sbjct: 216 DDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKAL 275
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
+++H++ I++ + NALI Y K + DA NVF+ + KDV SW +M+ +
Sbjct: 276 PQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGY 335
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
++ G FG+ F N + E D+ +W+A+IA
Sbjct: 336 TQSGK-----------------------FGAAFELFKNMRK----ENIPLDVITWSAVIA 368
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A EA+ F +M P+ +T+ SLL AC L QGM+ H+Y +K S
Sbjct: 369 GYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLS 428
Query: 333 ------------NVPVCNAILTMYAKCSVLCNALLVFKELGKNA-DSVSWNSIIAACLQH 379
++ V NA++ MY+KC A +F + + + V+W +I Q+
Sbjct: 429 LDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQY 488
Query: 380 NQAEELFRLFSRMLASQ--IKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFD 435
+ + +LFS M++ + P+ T + ++ ACA ++SL M Q+H Y+T+ +
Sbjct: 489 GDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSV 548
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
FV N L+D+Y KCG + +AR +F+ M + VSW+S++ GY G G EAL +F +M+
Sbjct: 549 YFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQK 608
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
G P+ ++ + +L ACSH G+V++GL + IM ++YG+I + +H +CV+DLLAR+G +
Sbjct: 609 AGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLD 668
Query: 556 EAEDFINQMACDADIVVWKSLLAS 579
+A I +M + +W +LL++
Sbjct: 669 KAWKTIQEMPMEPSAAIWVALLSA 692
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 112/506 (22%), Positives = 215/506 (42%), Gaps = 106/506 (20%)
Query: 26 QNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS 85
+ TN R + ++ AC+SL++L +++H + + + D + N +++ Y KCGS
Sbjct: 250 EKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGS 309
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQN-------------YQEN-------------- 118
++DA F+ M ++VVSW AM+ G +Q+ +EN
Sbjct: 310 MKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAG 369
Query: 119 --------DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS----- 165
+A+ + QM+ G P T S++ AC+ LG++ G + HA+ +K
Sbjct: 370 YAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSL 429
Query: 166 -------EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD--VTSWGSMIAAFSKLG 216
G L+ NALI MY+K AR +F+ I R++ V +W MI +++ G
Sbjct: 430 DNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYG 489
Query: 217 YELEALCHFNEMLHHG-AYQPNEFIFGSVFSACSNF------------------------ 251
+AL F+EM+ A PN + + AC++
Sbjct: 490 DSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVY 549
Query: 252 ------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
AR +F+ + + SW ++++G H EA+ +F +M+
Sbjct: 550 FVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKA 609
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA-----ILTMYAKCS 348
+PD ++ LL AC + QG+ Y M D V + +A ++ + A+
Sbjct: 610 GFVPDDISFLVLLYACSHSGMVDQGLD---YFDIMRSDYGV-IASAQHYACVIDLLARSG 665
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD--HITFND 406
L A +E+ + W ++++AC H+ E +++++ + + D + ++
Sbjct: 666 RLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISN 725
Query: 407 VMGACAKMASLEMVTQLHCYITKTGL 432
+ + + + QL + K+G+
Sbjct: 726 IYATARRWKDVARIRQL---MKKSGI 748
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 125/267 (46%), Gaps = 22/267 (8%)
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
HSY+ S + ++ Y C +AL V + + + +V WN ++ A ++ +
Sbjct: 77 HSYV------SPKSLGTGVVASYLACGATSDALSVLERVVPSP-AVWWNLLVRAHIEEGR 129
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+ + RML + KPDH T + AC ++ S + H I G +VFV N
Sbjct: 130 LDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNA 189
Query: 442 LMDIYIKCGSLGSARKLFNFMENP---DVVSWSSLILGYAQFGCGDEALKLFTRM----- 493
L+ +Y + GSL A +F+ + DV+SW+S++ + + AL LF+ M
Sbjct: 190 LVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVH 249
Query: 494 -RSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLAR 550
++ +++++V +L AC+ + + + +H Y I G C+ ++D A+
Sbjct: 250 EKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRN---GTFADAFVCNALIDTYAK 306
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLL 577
G + +A + N M D+V W +++
Sbjct: 307 CGSMKDAVNVFNVMEFK-DVVSWNAMV 332
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 168/572 (29%), Positives = 293/572 (51%), Gaps = 53/572 (9%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP T ++ AC L S + G H I + + +V + N ++ MY +CGSLE+A M
Sbjct: 152 RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 211
Query: 92 GFDKMPQR---NVVSWTAMIAGCSQNYQENDAIKLYIQML------QSGVMPGQFTFGSI 142
FD++ QR +V+SW ++++ ++ A+ L+ +M + + +I
Sbjct: 212 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 271
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
+ AC L +V +++H + I++ + NALI Y K + +A VF+ + KDV
Sbjct: 272 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 331
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSP 262
SW +M+A +S+ G F A + + E
Sbjct: 332 VSWNAMVAGYSQSGN---------------------------FEAAFELFKNMRKENIPL 364
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ +W A+IAG + ++EA++LF +M LP+ +T+ S+L AC QG ++H
Sbjct: 365 DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIH 424
Query: 323 SYIIKM----------GFDSNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNS 371
+Y +K G D ++ V NA++ MY+KC A +F ++ + + V+W
Sbjct: 425 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 484
Query: 372 IIAACLQHNQAEELFRLFSRMLASQ--IKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
+I Q+ + + +LF M++ + P+ T + ++ ACA +A++ + Q+H Y+ +
Sbjct: 485 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 544
Query: 430 TGL--AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
+ FV N L+D+Y KCG + +AR +F+ M +SW+S++ GY G G EAL
Sbjct: 545 HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 604
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
+F +MR G P+ +T + VL ACSH G+V++GL + M +YG+ P EH +C +DL
Sbjct: 605 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDL 664
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
LAR+G + +A + M + VVW +LL++
Sbjct: 665 LARSGRLDKAWRTVKDMPMEPTAVVWVALLSA 696
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 191/452 (42%), Gaps = 97/452 (21%)
Query: 26 QNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS 85
+ TN R + ++ AC SL+++ ++VH + + + PDV + N +++ Y KCG
Sbjct: 256 EKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGL 315
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQN-------------YQEN-------------- 118
+E+A F+ M ++VVSW AM+AG SQ+ +EN
Sbjct: 316 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAG 375
Query: 119 --------DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS----- 165
+A+ L+ QM+ SG +P T S++ AC+ LG+ G ++HA+ +K+
Sbjct: 376 YSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTL 435
Query: 166 -----EHGSHLIAQNALIAMYTKFDRILDARNVFSGIA--RKDVTSWGSMIAAFSKLGYE 218
L+ NALI MY+K AR++F I ++V +W MI ++ G
Sbjct: 436 DNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDS 495
Query: 219 LEALCHFNEMLHHG-AYQPNEFIFGSVFSACSNFARI----------------------- 254
+AL F EM+ PN + + AC++ A I
Sbjct: 496 NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFV 555
Query: 255 -------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+F+ + SW +++ G H +EA+ +F +MR
Sbjct: 556 ANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 615
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV-PVCN---AILTMYAKCSVLC 351
+PD +T +L AC + QG+ SY M D + P + + A+ L
Sbjct: 616 VPDDITFLVVLYACSHCGMVDQGL---SYFDSMSADYGLTPRAEHYACAIDLLARSGRLD 672
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
A K++ +V W ++++AC H+ E
Sbjct: 673 KAWRTVKDMPMEPTAVVWVALLSACRVHSNVE 704
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 121/259 (46%), Gaps = 14/259 (5%)
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
F S + ++ Y C ALLV + + + +V WN +I ++ + + +
Sbjct: 85 FISPRSLGTGVVASYLACGATDYALLVLERVTPSP-AVWWNLLIREHIKQGRLDSAINVS 143
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
RML + +PDH T V+ AC ++ S + H I G +VF+ N L+ +Y +C
Sbjct: 144 CRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRC 203
Query: 450 GSLGSARKLFNFMEN---PDVVSWSSLILGYAQFGCGDEALKLFTRM------RSLGVSP 500
GSL A +F+ + DV+SW+S++ + + AL LF++M +
Sbjct: 204 GSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERS 263
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
+++++V +L AC + V + ++ + N G P + ++D A+ G + A
Sbjct: 264 DIISIVNILPACGSLKAVPQTKEVHGNAIRN--GTFPDVFVGNALIDAYAKCGLMENAVK 321
Query: 560 FINQMACDADIVVWKSLLA 578
N M D+V W +++A
Sbjct: 322 VFNMMEFK-DVVSWNAMVA 339
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
G++ Y+ CG+ A + + V W+ LI + + G D A+ + RM G
Sbjct: 93 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 152
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH------CSCVVDLLARAGC 553
P+ TL VL AC L YR +G+I C+ +V + +R G
Sbjct: 153 PDHFTLPHVLKACGE-------LPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 205
Query: 554 VHEAE---DFINQMACDADIVVWKSLLAS 579
+ EA D I Q D D++ W S++++
Sbjct: 206 LEEASMIFDEITQRGID-DVISWNSIVSA 233
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 180/606 (29%), Positives = 289/606 (47%), Gaps = 99/606 (16%)
Query: 41 LISA---CSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD--- 94
L+SA CS L G+++H + S + +QN ++NMYGKCG L DA+ FD
Sbjct: 69 LVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFDVCP 128
Query: 95 ----------------------------KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
+MP + VS+T MI G SQN N A++L+ Q
Sbjct: 129 RSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQ 188
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M GV+P + T +++ A S G + R LH VIK ++ L+ MY
Sbjct: 189 MRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSS 248
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+++AR +F + K++ SW M+ +SK G+
Sbjct: 249 LVEARALFDEMPEKNIVSWNVMLNGYSKAGF----------------------------- 279
Query: 247 ACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
+ AR++F I + DL +W +I G NEA+ ++ M P+ + + L+
Sbjct: 280 --VDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLI 337
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
C + + +G Q+ S ++KMGFD + + I+ +YA C + A L F+ +G +
Sbjct: 338 SGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFR-IGSKENV 396
Query: 367 VSWNSIIAACLQH---NQAEELF----------------------------RLFSRMLAS 395
SWN++IA +++ ++A ELF LF +M+AS
Sbjct: 397 ASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVAS 456
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA 455
IKP+ +T V+ A A +L+ H Y+ + + ++D+Y KCGS+ +A
Sbjct: 457 GIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGSINNA 516
Query: 456 RKLF-NFMENPDVVS-WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
++F E VS W+++I G A G + +LK+F+ + + N +T +GVLTAC
Sbjct: 517 LEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTACC 576
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
HVGLVE G + M++E+ I P +H C+VDLL RAG + EAE+ I M AD+V+W
Sbjct: 577 HVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKADVVIW 636
Query: 574 KSLLAS 579
+LLA+
Sbjct: 637 GTLLAA 642
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 132/514 (25%), Positives = 227/514 (44%), Gaps = 72/514 (14%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
A + + N+ + P+ T A L+SA S + R +H ++ + V++ ++L
Sbjct: 182 AVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLR 241
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN------------------------ 114
MY C SL +AR FD+MP++N+VSW M+ G S+
Sbjct: 242 MYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTI 301
Query: 115 -------YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
+ N+A+ +Y M+ +G P +I C ++ G+QL + V+K
Sbjct: 302 IDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGF 361
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
+ Q+ +I +Y RI +A F ++++V SW ++IA + + N
Sbjct: 362 DCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVR-----------NR 410
Query: 228 MLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
M+ A LFNE+ D+ SW+ +I+G + N A+ LF
Sbjct: 411 MIDR--------------------AMELFNEMPERDVFSWSTMISGYTQNEQPNLALELF 450
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
+M + P+ +T+ S+L A TL +G H Y+ + + AI+ MYAKC
Sbjct: 451 HKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKC 510
Query: 348 SVLCNALLVFKELGKNADSVS-WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
+ NAL VF E+ + A +VS WN+II H A ++FS + IK + ITF
Sbjct: 511 GSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIG 570
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG--LMDIYIKCGSLGSARKLFNFME- 463
V+ AC + +E + H K+ + D + + ++D+ + G L A ++ M
Sbjct: 571 VLTACCHVGLVE-SGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPM 629
Query: 464 NPDVVSWSSLILG---YAQFGCGDEALKLFTRMR 494
DVV W +L+ + G+ A + R+
Sbjct: 630 KADVVIWGTLLAACRTHGNVDVGERAAENLARLE 663
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 117/260 (45%), Gaps = 36/260 (13%)
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
L + S L C L L QG Q+H + K G SN + N+++ MY KC +L +A +F +
Sbjct: 67 LVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIF-D 125
Query: 360 LGKNADSVSWNSIIAACLQHNQAE---ELF----------------------------RL 388
+ +D VS+N +I+ ++ Q + ELF L
Sbjct: 126 VCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVEL 185
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
F +M + P+ +T ++ A + + LH + K V V L+ +Y
Sbjct: 186 FKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCV 245
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
C SL AR LF+ M ++VSW+ ++ GY++ G D A +F R+ + +LVT +
Sbjct: 246 CSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIP----NKDLVTWGTI 301
Query: 509 LTACSHVGLVEEGLHLYRIM 528
+ V + E L +YR M
Sbjct: 302 IDGYVRVERINEALMMYRSM 321
>gi|242074230|ref|XP_002447051.1| hypothetical protein SORBIDRAFT_06g027570 [Sorghum bicolor]
gi|241938234|gb|EES11379.1| hypothetical protein SORBIDRAFT_06g027570 [Sorghum bicolor]
Length = 818
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 176/597 (29%), Positives = 297/597 (49%), Gaps = 57/597 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILL-SKCQPDV-VLQNHILNMYGKC------GSLED 88
TY+ ++AC+ R L+LG+ VH H+L ++ PD VL+N +LN+Y C G ++
Sbjct: 135 TYSCALTACARTRRLRLGKSVHAHLLRRARSLPDTAVLRNSLLNLYASCMRYRGDGGVDV 194
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
R FD MP+RN VSW + + + +A++L+ +ML+ G+ P +F ++ A +
Sbjct: 195 VRRLFDVMPKRNAVSWNTLFGWYVKTGRPQEALELFARMLEDGIKPTPVSFVNVFPAVAK 254
Query: 149 LGSVCLGRQLHAHVIK--SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
L+ ++K E+ + L ++ IAM+++ + A VF A+K+ W
Sbjct: 255 -EDPSWSFVLYGLLVKHGREYVNDLFVVSSAIAMFSELGDLQSAWRVFEYTAKKNTEVWN 313
Query: 207 SMIAAFSKLGYELEAL-------------------------------CHFNEMLH----H 231
+MI + + G EA+ + LH
Sbjct: 314 TMITGYVQNGKFAEAMDLVIRLMGSKEVPLDVVTFLSALTAASQSQDGRLGQQLHGYLIK 373
Query: 232 GAYQPNEFIFGS----VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
G + I G+ ++S C N A LF+ + D+ SWN ++ + E +
Sbjct: 374 GTHATLPVILGNALVVMYSRCGNVQTAFKLFDRLPEKDIVSWNTMVTAFVQNDFDLEGLL 433
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
L +M+ D +T+ ++L A L G Q H Y+++ G + + + ++ MYA
Sbjct: 434 LVYQMQKSCFAADSVTLTAVLSAASNTGDLQIGKQAHGYLVRRGIEDE-GLESYLIDMYA 492
Query: 346 KCSVLCNALLVFKELGK-NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
K + A VF + G D V+WN++IA Q Q E+ F ML + ++P +T
Sbjct: 493 KSGRIEIAQRVFDDYGNVKRDEVTWNAMIAGYTQSGQPEQAILTFRAMLQASLEPTSVTL 552
Query: 405 NDVMGACAKMAS-LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
V+ AC + L Q+HC+ + L +VFV L+D+Y KCG + +A +F M
Sbjct: 553 ASVLPACDPLGGGLCAGKQIHCFALRRCLDTNVFVGTALVDMYSKCGEISTAEHVFAVMI 612
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
VS++++I G Q G G+ AL LF M+ G+ P+ VT + ++AC++ GLV+EGL
Sbjct: 613 EKSTVSYTTMISGLGQHGFGERALSLFYYMQEKGLKPDGVTFLAAISACNYSGLVDEGLA 672
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV-VWKSLLAS 579
LYR ME +G+ T +H C+VD+LA+AG V EA +F+ ++ + + + +W SLL S
Sbjct: 673 LYRSMET-FGVAVTPQHRCCIVDMLAKAGRVEEAYEFVQELGEEGNFISIWGSLLVS 728
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 129/474 (27%), Positives = 218/474 (45%), Gaps = 76/474 (16%)
Query: 107 MIAGCSQNYQENDAIKLYIQMLQSGVMPG----QFTFGSIIKACSGLGSVCLGRQLHAHV 162
+IA +++ E+ A++LY +L P +T+ + AC+ + LG+ +HAH+
Sbjct: 102 LIAYVARSLPEH-ALRLYA-LLNHAARPAPRSDHYTYSCALTACARTRRLRLGKSVHAHL 159
Query: 163 IKSEHG--SHLIAQNALIAMYT-----KFDRILDA-RNVFSGIARKDVTSWGSMIAAFSK 214
++ + +N+L+ +Y + D +D R +F + +++ SW ++ + K
Sbjct: 160 LRRARSLPDTAVLRNSLLNLYASCMRYRGDGGVDVVRRLFDVMPKRNAVSWNTLFGWYVK 219
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------- 249
G EAL F ML G +P F +VF A +
Sbjct: 220 TGRPQEALELFARMLEDG-IKPTPVSFVNVFPAVAKEDPSWSFVLYGLLVKHGREYVNDL 278
Query: 250 ---NFARILFNEIDSPDLAS---------------WNALIAGVASHSNANEAMSLFSE-M 290
+ A +F+E+ DL S WN +I G + EAM L M
Sbjct: 279 FVVSSAIAMFSELG--DLQSAWRVFEYTAKKNTEVWNTMITGYVQNGKFAEAMDLVIRLM 336
Query: 291 RDRELLPDGLTVHSLLCACI----GRLTLYQGMQVHSYIIKMGFDSNVPVC--NAILTMY 344
+E+ D +T S L A GRL G Q+H Y+IK G + +PV NA++ MY
Sbjct: 337 GSKEVPLDVVTFLSALTAASQSQDGRL----GQQLHGYLIK-GTHATLPVILGNALVVMY 391
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
++C + A +F L + D VSWN+++ A +Q++ E L +M S D +T
Sbjct: 392 SRCGNVQTAFKLFDRLPEK-DIVSWNTMVTAFVQNDFDLEGLLLVYQMQKSCFAADSVTL 450
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
V+ A + L++ Q H Y+ + G+ D + + L+D+Y K G + A+++F+ N
Sbjct: 451 TAVLSAASNTGDLQIGKQAHGYLVRRGIE-DEGLESYLIDMYAKSGRIEIAQRVFDDYGN 509
Query: 465 --PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
D V+W+++I GY Q G ++A+ F M + P VTL VL AC +G
Sbjct: 510 VKRDEVTWNAMIAGYTQSGQPEQAILTFRAMLQASLEPTSVTLASVLPACDPLG 563
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 187/414 (45%), Gaps = 47/414 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILL-SKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
T+ ++A S + +LG+++H +++ + V+L N ++ MY +CG+++ A FD+
Sbjct: 347 TFLSALTAASQSQDGRLGQQLHGYLIKGTHATLPVILGNALVVMYSRCGNVQTAFKLFDR 406
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+P++++VSW M+ QN + + + L QM +S T +++ A S G + +G
Sbjct: 407 LPEKDIVSWNTMVTAFVQNDFDLEGLLLVYQMQKSCFAADSVTLTAVLSAASNTGDLQIG 466
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS--GIARKDVTSWGSMIAAFS 213
+Q H ++++ + ++ LI MY K RI A+ VF G ++D +W +MIA ++
Sbjct: 467 KQAHGYLVRRGIEDEGL-ESYLIDMYAKSGRIEIAQRVFDDYGNVKRDEVTWNAMIAGYT 525
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------- 251
+ G +A+ F ML + +P SV AC
Sbjct: 526 QSGQPEQAILTFRAML-QASLEPTSVTLASVLPACDPLGGGLCAGKQIHCFALRRCLDTN 584
Query: 252 -------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
A +F + S+ +I+G+ H A+SLF M++
Sbjct: 585 VFVGTALVDMYSKCGEISTAEHVFAVMIEKSTVSYTTMISGLGQHGFGERALSLFYYMQE 644
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ L PDG+T + + AC + +G+ ++ + G I+ M AK +
Sbjct: 645 KGLKPDGVTFLAAISACNYSGLVDEGLALYRSMETFGVAVTPQHRCCIVDMLAKAGRVEE 704
Query: 353 ALLVFKELGKNADSVS-WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
A +ELG+ + +S W S++ +C ++ E + R+L + K H +N
Sbjct: 705 AYEFVQELGEEGNFISIWGSLLVSCKAQDKQELVNLATERLLCIEKKYGHAGYN 758
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 13/157 (8%)
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKP----DHITFNDVMGACAKMASLEMVTQLH 424
+N+++ A + + E RL++ +L +P DH T++ + ACA+ L + +H
Sbjct: 98 YNALLIAYVARSLPEHALRLYA-LLNHAARPAPRSDHYTYSCALTACARTRRLRLGKSVH 156
Query: 425 CYITKTGLAF-DVFVM-NGLMDIYIKC------GSLGSARKLFNFMENPDVVSWSSLILG 476
++ + + D V+ N L+++Y C G + R+LF+ M + VSW++L
Sbjct: 157 AHLLRRARSLPDTAVLRNSLLNLYASCMRYRGDGGVDVVRRLFDVMPKRNAVSWNTLFGW 216
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
Y + G EAL+LF RM G+ P V+ V V A +
Sbjct: 217 YVKTGRPQEALELFARMLEDGIKPTPVSFVNVFPAVA 253
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 181/611 (29%), Positives = 301/611 (49%), Gaps = 104/611 (17%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+A ++ ++ GR VH I+ V L N+++ Y K GSL A FD+MP
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 98 QRNV-------------------------------VSWTAMIAGCSQNYQENDAIKLYIQ 126
++ VSWTA+I G +Q ++AI ++ +
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M+ V P QFT +++ +C+ ++ +GR++H+ V+K GS + +L+ MY K
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLG-YELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A+ VF + K++++W ++I+ + + G +EL A F +M P+
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAA-SQFEKM-------PDR------- 237
Query: 246 SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHS 304
D+ SWN++I+G + EA+ +FS+M + L PD T+ S
Sbjct: 238 -----------------DIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLAS 280
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV-------- 356
+L AC L G Q+H+YI++ +++ V NA+++MYAK + A L+
Sbjct: 281 ILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSN 340
Query: 357 ------------FKELG------------KNADSVSWNSIIAACLQH---NQAEELFRLF 389
+ +LG ++ D V+W ++I +Q+ N A ELFRL
Sbjct: 341 LNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRL- 399
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
M+ +P+ T ++ + + LE Q+H K G + V N L+ +Y K
Sbjct: 400 --MVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKT 457
Query: 450 GSLGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
G++ A+++F+ ++VSW+S+I+ AQ G G EA+ LF RM S+G+ P+ +T VGV
Sbjct: 458 GNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGV 517
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
L+AC+HVGLVE+G Y +M + I PT H +C++DL RAG + EA FI M +
Sbjct: 518 LSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEP 577
Query: 569 DIVVWKSLLAS 579
D + W SLLAS
Sbjct: 578 DNIAWGSLLAS 588
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/508 (23%), Positives = 220/508 (43%), Gaps = 122/508 (24%)
Query: 32 RIRPS--TYAGLISACSSLRSLQLGRKVHDHIL---LSKCQPDVVLQNHILNMYGKC--- 83
R+ PS T + ++S+C++ ++L +GRK+H ++ L C P + +LNMY KC
Sbjct: 137 RVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVP---VATSLLNMYAKCGDP 193
Query: 84 ----------------------------GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
G E A F+KMP R++VSW +MI+G SQ
Sbjct: 194 VIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQG 253
Query: 116 QENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
+A+ ++ +ML + + P FT SI+ AC+ L + +G+Q+HA+++++E +
Sbjct: 254 YNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVG 313
Query: 175 NALIAMYTK-----------------------FDRILD----------ARNVFSGIARKD 201
NALI+MY K F +LD AR +F+ + +D
Sbjct: 314 NALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRD 373
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------ 249
V +W +MI + + G +AL F M++ G +PN + ++ S S
Sbjct: 374 VVAWTAMIVGYVQNGLWNDALELFRLMVNEGP-EPNSYTLAAMLSVSSSLTILEHGKQIH 432
Query: 250 ----------------------------NFARILFNEID-SPDLASWNALIAGVASHSNA 280
N A+ +F+ + ++ SW ++I +A H
Sbjct: 433 ASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLG 492
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNA 339
EA++LF M + PD +T +L AC + QG + ++ + ++ + +
Sbjct: 493 KEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYAC 552
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
++ +Y + +L A L + + D+++W S++A+C H A+ R+L I P
Sbjct: 553 MIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLL--IDP 610
Query: 400 D----HITFNDVMGACAKMASLEMVTQL 423
++ +V AC K + +L
Sbjct: 611 GNSGAYLALANVYSACGKWENAAQTRKL 638
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 164/352 (46%), Gaps = 50/352 (14%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S +Q EALV + N +++ T A ++SAC++L L +G+++H +IL
Sbjct: 243 NSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYIL 302
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARM------------------------------- 91
++ + + N +++MY K G +E AR+
Sbjct: 303 RAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPA 362
Query: 92 --GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F+K+ R+VV+WTAMI G QN NDA++L+ M+ G P +T +++ S L
Sbjct: 363 REIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSL 422
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS-GIARKDVTSWGSM 208
+ G+Q+HA IK+ S NALIAMY K I A+ VF +K++ SW SM
Sbjct: 423 TILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSM 482
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-----ARILFN------ 257
I A ++ G EA+ F ML G +P+ + V SAC++ R +N
Sbjct: 483 IMALAQHGLGKEAINLFERMLSVG-MKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVH 541
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
EI+ P L+ + +I EA M + PD + SLL +C
Sbjct: 542 EIE-PTLSHYACMIDLYGRAGLLQEAYLFIESM---PIEPDNIAWGSLLASC 589
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 187/588 (31%), Positives = 300/588 (51%), Gaps = 49/588 (8%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T + +IS C SL + LG +V H++ + +V + N +++M+G GS+E+A F
Sbjct: 132 NTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSG 191
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M + + +SW +MIA +N ++++ + M + T +++ C + ++ G
Sbjct: 192 MDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWG 251
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R +H+ V+K S++ A N LI MY+ R DA VF G+ KD+ SW SM+A +++
Sbjct: 252 RGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQD 311
Query: 216 GYELEALCHFNEMLH--HGAYQPNEFIFGSVFSACSN----------------------- 250
G L+AL M + GA N F S +ACS+
Sbjct: 312 GNCLDALKLLATMFYMRRGA---NYVTFTSALAACSDPEFATEGKILHALVIHVGLHENV 368
Query: 251 -----------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
A+ +F + D +WNALI G A +EA+ F MR+
Sbjct: 369 IVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREE 428
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ + +T+ ++L AC+ L + GM +H++II GF S+ V N+++TMYAKC L +
Sbjct: 429 GVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNS 488
Query: 353 ALLVFKEL-GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+ +F L KNA + + +++AA H EE + M + + D +F++ + A
Sbjct: 489 SNNIFDRLTSKNASAWN--AMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAA 546
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
AK+A LE QLH K G + FV + MD+Y KCG + ++ N +SW+
Sbjct: 547 AKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWN 606
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
L +++ G ++A + F M +LGV P+ VT V +L+ACSH G+VEEGL Y M E
Sbjct: 607 ILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKE 666
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+GI HC C++DLL R+G EAE FI +M VW+SLLA+
Sbjct: 667 FGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAA 714
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 153/564 (27%), Positives = 263/564 (46%), Gaps = 49/564 (8%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQL-GRKVHDHIL 62
+S + Y E++ F + ++PS A L++AC + + G +VH I+
Sbjct: 1 MSGFVRAGSYRESM---RFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIV 57
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
DV + ++++YG G DA F +M +NVVSWTA++ + + +
Sbjct: 58 KVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMN 117
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+Y +M G+ T S+I C L + LG Q+ HVIK +++ N+LI+M+
Sbjct: 118 IYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFG 177
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
F + +A VFSG+ D SW SMIAA+ + G E+L F+ M + N
Sbjct: 178 YFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHK-EINSTTLS 236
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
++ + C + A ++F +
Sbjct: 237 TMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEK 296
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ SWN+++A A N +A+ L + M + +T S L AC +G +H
Sbjct: 297 DMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILH 356
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ +I +G NV V NA++T+YAK ++ A VF+ + K D V+WN++I +
Sbjct: 357 ALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKR-DGVTWNALIGGHADSEEP 415
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGAC-AKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+E + F M + ++IT ++V+GAC A LE +H +I TG D +V N
Sbjct: 416 DEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNS 475
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+ +Y KCG L S+ +F+ + + + +W++++ A G +EALK MR GV+ +
Sbjct: 476 LITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVD 535
Query: 502 LVTLVGVLTACSHVGLVEEGLHLY 525
+ L A + + ++EEG L+
Sbjct: 536 EFSFSECLAAAAKLAILEEGQQLH 559
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/514 (25%), Positives = 232/514 (45%), Gaps = 44/514 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +++ + L E+L + + + I +T + +++ C S+ +L+ GR +H +L
Sbjct: 201 NSMIAAYIRNGLCKESLRCFSW-MFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVL 259
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+V N ++ MY G EDA + F M +++++SW +M+A +Q+ DA+K
Sbjct: 260 KFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALK 319
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L M TF S + ACS G+ LHA VI ++I NAL+ +Y
Sbjct: 320 LLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYA 379
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHF----------------- 225
K +++A+ VF + ++D +W ++I + EAL F
Sbjct: 380 KSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISN 439
Query: 226 --------NEMLHHG----------AYQPNEFIFGSV---FSACS--NFARILFNEIDSP 262
N++L HG +Q +E++ S+ ++ C N + +F+ + S
Sbjct: 440 VLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSK 499
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+ ++WNA++A A H + EA+ EMR + D + L A L +G Q+H
Sbjct: 500 NASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLH 559
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+K+G DSN V +A + MY KC + + L + N +SWN + ++ +H
Sbjct: 560 GLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPR-PINRSRLSWNILTSSFSRHGFF 618
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM-VTQLHCYITKTGLAFDVFVMNG 441
E+ F M+ +KPDH+TF ++ AC+ +E + I + G+ +
Sbjct: 619 EKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVC 678
Query: 442 LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + G A M +P W SL+
Sbjct: 679 IIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLL 712
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 163/310 (52%), Gaps = 6/310 (1%)
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC-IGRLTLYQGMQVHSYIIKMG 329
++G + E+M F+EMRD + P G+ V SL+ AC L +G+QVH +I+K+G
Sbjct: 1 MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKEL-GKNADSVSWNSIIAACLQHNQAEELFRL 388
S+V V +++ +Y + +A+ VF+E+ KN VSW +++ A + + + + +
Sbjct: 61 LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNV--VSWTALMVAYVDYGEPSMVMNI 118
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
+ RM + + + T + V+ C + + + Q+ ++ K GL +V V N L+ ++
Sbjct: 119 YRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGY 178
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
GS+ A +F+ M+ D +SW+S+I Y + G E+L+ F+ M + N TL +
Sbjct: 179 FGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTM 238
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
L C V ++ G ++ ++ ++G + ++ + + AG +AE + Q +
Sbjct: 239 LAGCGSVDNLKWGRGIHSLVL-KFGWNSNVCASNTLITMYSDAGRCEDAE-LVFQGMVEK 296
Query: 569 DIVVWKSLLA 578
D++ W S++A
Sbjct: 297 DMISWNSMMA 306
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 184/431 (42%), Gaps = 47/431 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ACS G+ +H ++ +V++ N ++ +Y K G + +A+ F M
Sbjct: 335 TFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTM 394
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL-G 155
P+R+ V+W A+I G + + + ++A+K + M + GV T +++ AC + G
Sbjct: 395 PKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHG 454
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+HA +I + S QN+LI MY K + + N+F + K+ ++W +M+AA +
Sbjct: 455 MPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHH 514
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGS-------------------------------- 243
G+ EAL EM G +EF F
Sbjct: 515 GHMEEALKFLLEMRRAGV-NVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFV 573
Query: 244 ------VFSAC---SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
++ C + RI+ I+ L SWN L + + H +A F EM +
Sbjct: 574 ASATMDMYGKCGEIDDVLRIIPRPINRSRL-SWNILTSSFSRHGFFEKAKETFHEMINLG 632
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNA 353
+ PD +T SLL AC + +G+ + +IK G + + C I+ + + A
Sbjct: 633 VKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEA 692
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD--HITFNDVMGAC 411
KE+ + W S++AAC H E + +L D ++ ++++
Sbjct: 693 ETFIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATT 752
Query: 412 AKMASLEMVTQ 422
K +E + +
Sbjct: 753 GKWEDVEKIRR 763
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 171/583 (29%), Positives = 293/583 (50%), Gaps = 49/583 (8%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A L+ C+SL+ L ++ I+ + + + Q +++++ K S+ +A F+ +
Sbjct: 48 AILLELCTSLKELH---QILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEH 104
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+ V + M+ G ++N DA++ Y +M VMP + F +++ + GR++
Sbjct: 105 KLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREI 164
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H VI + S+L A A++ +Y K +I DA +F + ++D+ SW +++A +++ G+
Sbjct: 165 HGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFA 224
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------------- 251
A+ +M G +P+ SV A ++
Sbjct: 225 RRAVQVVLQMQEAGQ-KPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATA 283
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
AR++F + S ++ SWN +I G A + + EA + F +M D + P
Sbjct: 284 MLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPT 343
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYI--IKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
+++ L AC L +G VH + K+GFD V V N++++MY+KC + A V
Sbjct: 344 NVSMMGALHACANLGDLERGRYVHRLLDEKKIGFD--VSVMNSLISMYSKCKRVDIAASV 401
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F L K+ V+WN++I Q+ E LF M + IKPD T V+ A A ++
Sbjct: 402 FGNL-KHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSV 460
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
+H +T + +VFV L+D + KCG++ +ARKLF+ M+ V++W+++I G
Sbjct: 461 TRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDG 520
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y G G EAL LF M++ V PN +T + V+ ACSH GLVEEG++ + M+ YG+ P
Sbjct: 521 YGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEP 580
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
T +H +VDLL RAG + +A FI M I V ++L +
Sbjct: 581 TMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGA 623
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 186/400 (46%), Gaps = 49/400 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T ++ A + L++L++GR +H + + + V + +L+ Y KCGS+ AR+ F M
Sbjct: 245 TLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGM 304
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
RNVVSW MI G +QN + +A +++ML GV P + + AC+ LG + GR
Sbjct: 305 SSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGR 364
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H + + + G + N+LI+MY+K R+ A +VF + K V +W +MI +++ G
Sbjct: 365 YVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNG 424
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
EAL F EM H +P+ F SV +A ++
Sbjct: 425 CVNEALNLFCEMQSHDI-KPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVC 483
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR LF+ + + +WNA+I G ++ + EA+ LF+EM++ +
Sbjct: 484 TALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVK 543
Query: 297 PDGLTVHSLLCACIGRLTLYQGM-QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ +T S++ AC + +GM S G + + A++ + + L +A
Sbjct: 544 PNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWK 603
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRL 388
+++ +++ AC H A+ELF L
Sbjct: 604 FIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDL 643
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 8/185 (4%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRK---VHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
I+P ++ L+S ++L L + R+ +H + + +V + +++ + KCG+++ A
Sbjct: 441 IKPDSFT-LVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTA 499
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD M +R+V++W AMI G N +A+ L+ +M V P + TF S+I ACS
Sbjct: 500 RKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHS 559
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILDARNVFSGIARKD-VTSWG 206
G V G + +K +G + A++ + + R+ DA + K +T G
Sbjct: 560 GLVEEG-MYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLG 618
Query: 207 SMIAA 211
+M+ A
Sbjct: 619 AMLGA 623
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 168/572 (29%), Positives = 293/572 (51%), Gaps = 53/572 (9%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP T ++ AC L S + G H I + + +V + N ++ MY +CGSLE+A M
Sbjct: 159 RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 218
Query: 92 GFDKMPQR---NVVSWTAMIAGCSQNYQENDAIKLYIQML------QSGVMPGQFTFGSI 142
FD++ QR +V+SW ++++ ++ A+ L+ +M + + +I
Sbjct: 219 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 278
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
+ AC L +V +++H + I++ + NALI Y K + +A VF+ + KDV
Sbjct: 279 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 338
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSP 262
SW +M+A +S+ G F A + + E
Sbjct: 339 VSWNAMVAGYSQSGN---------------------------FEAAFELFKNMRKENIPL 371
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ +W A+IAG + ++EA++LF +M LP+ +T+ S+L AC QG ++H
Sbjct: 372 DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIH 431
Query: 323 SYIIKM----------GFDSNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNS 371
+Y +K G D ++ V NA++ MY+KC A +F ++ + + V+W
Sbjct: 432 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 491
Query: 372 IIAACLQHNQAEELFRLFSRMLASQ--IKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
+I Q+ + + +LF M++ + P+ T + ++ ACA +A++ + Q+H Y+ +
Sbjct: 492 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 551
Query: 430 TGL--AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
+ FV N L+D+Y KCG + +AR +F+ M +SW+S++ GY G G EAL
Sbjct: 552 HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 611
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
+F +MR G P+ +T + VL ACSH G+V++GL + M +YG+ P EH +C +DL
Sbjct: 612 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDL 671
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
LAR+G + +A + M + VVW +LL++
Sbjct: 672 LARSGRLDKAWRTVKDMPMEPTAVVWVALLSA 703
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 191/452 (42%), Gaps = 97/452 (21%)
Query: 26 QNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS 85
+ TN R + ++ AC SL+++ ++VH + + + PDV + N +++ Y KCG
Sbjct: 263 EKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGL 322
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQN-------------YQEN-------------- 118
+E+A F+ M ++VVSW AM+AG SQ+ +EN
Sbjct: 323 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAG 382
Query: 119 --------DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS----- 165
+A+ L+ QM+ SG +P T S++ AC+ LG+ G ++HA+ +K+
Sbjct: 383 YSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTL 442
Query: 166 -----EHGSHLIAQNALIAMYTKFDRILDARNVFSGIA--RKDVTSWGSMIAAFSKLGYE 218
L+ NALI MY+K AR++F I ++V +W MI ++ G
Sbjct: 443 DNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDS 502
Query: 219 LEALCHFNEMLHHG-AYQPNEFIFGSVFSACSNF-------------------------- 251
+AL F EM+ PN + + AC++
Sbjct: 503 NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFV 562
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR +F+ + SW +++ G H +EA+ +F +MR
Sbjct: 563 ANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 622
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV-PVCN---AILTMYAKCSVLC 351
+PD +T +L AC + QG+ SY M D + P + + A+ L
Sbjct: 623 VPDDITFLVVLYACSHCGMVDQGL---SYFDSMSADYGLTPRAEHYACAIDLLARSGRLD 679
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
A K++ +V W ++++AC H+ E
Sbjct: 680 KAWRTVKDMPMEPTAVVWVALLSACRVHSNVE 711
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 121/259 (46%), Gaps = 14/259 (5%)
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
F S + ++ Y C ALLV + + + +V WN +I ++ + + +
Sbjct: 92 FISPRSLGTGVVASYLACGATDYALLVLERVTPSP-AVWWNLLIREHIKQGRLDSAINVS 150
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
RML + +PDH T V+ AC ++ S + H I G +VF+ N L+ +Y +C
Sbjct: 151 CRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRC 210
Query: 450 GSLGSARKLFNFMEN---PDVVSWSSLILGYAQFGCGDEALKLFTRM------RSLGVSP 500
GSL A +F+ + DV+SW+S++ + + AL LF++M +
Sbjct: 211 GSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERS 270
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
+++++V +L AC + V + ++ + N G P + ++D A+ G + A
Sbjct: 271 DIISIVNILPACGSLKAVPQTKEVHGNAIRN--GTFPDVFVGNALIDAYAKCGLMENAVK 328
Query: 560 FINQMACDADIVVWKSLLA 578
N M D+V W +++A
Sbjct: 329 VFNMMEFK-DVVSWNAMVA 346
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
G++ Y+ CG+ A + + V W+ LI + + G D A+ + RM G
Sbjct: 100 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 159
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH------CSCVVDLLARAGC 553
P+ TL VL AC L YR +G+I C+ +V + +R G
Sbjct: 160 PDHFTLPHVLKACGE-------LPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 212
Query: 554 VHEAE---DFINQMACDADIVVWKSLLAS 579
+ EA D I Q D D++ W S++++
Sbjct: 213 LEEASMIFDEITQRGID-DVISWNSIVSA 240
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/489 (31%), Positives = 259/489 (52%), Gaps = 31/489 (6%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F + V++W ++I + + A+ +++M SG P F S++K+C+ + +
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G +H +++ L NAL+ MY K
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKL---------------------------- 153
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGS--VFSACSNFARILFNEIDSPDLASWNAL 270
+G ++ F+EM + +E + + + R +F + D+ S+N +
Sbjct: 154 LGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTI 213
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
IAG A +A+ + EM +L PD T+ S+L + + +G ++H Y+I+ G
Sbjct: 214 IAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGI 273
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
DS+V + ++++ MYAK + + ++ VF L D +SWNS++A +Q+ + E RLF
Sbjct: 274 DSDVYIGSSLVDMYAKSARIEDSERVFSRL-YCRDGISWNSLVAGYVQNGRYNEALRLFR 332
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
+M+ +++KP + F+ V+ ACA +A+L + QLH Y+ + G ++F+ + L+D+Y KCG
Sbjct: 333 QMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCG 392
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
++ +ARK+F+ M D VSW+++I+G+A G G EA+ LF M+ GV PN V V VLT
Sbjct: 393 NIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLT 452
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSHVGLV+E + M YG+ EH + V DLL RAG + EA +FI++M +
Sbjct: 453 ACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTG 512
Query: 571 VVWKSLLAS 579
VW +LL+S
Sbjct: 513 SVWSTLLSS 521
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 162/317 (51%), Gaps = 15/317 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + +Y +AL T+++ T + ++ S + G+++H +++
Sbjct: 211 NTIIAGYAQSGMYEDALRMVR-EMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVI 269
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
DV + + +++MY K +ED+ F ++ R+ +SW +++AG QN + N+A++
Sbjct: 270 RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALR 329
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ QM+ + V PG F S+I AC+ L ++ LG+QLH +V++ GS++ +AL+ MY+
Sbjct: 330 LFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYS 389
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I AR +F + D SW ++I + G+ EA+ F EM G +PN+ F
Sbjct: 390 KCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV-KPNQVAFV 448
Query: 243 SVFSACSNFARI-----LFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
+V +ACS+ + FN + + +L + A+ + EA + S+M
Sbjct: 449 AVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMC- 507
Query: 293 RELLPDGLTVHSLLCAC 309
+ P G +LL +C
Sbjct: 508 --VEPTGSVWSTLLSSC 522
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 194/457 (42%), Gaps = 95/457 (20%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPS-------TYAGLISACSSLRSLQLGRKVHDHILLS 64
Q+L+++AL ++ + +R S + ++ +C+ + L+ G VH I+
Sbjct: 83 QSLFSKALASF--------VEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRL 134
Query: 65 KCQPDVVLQNHILNMYGKC---GS---------------------------------LED 88
D+ N ++NMY K GS ++
Sbjct: 135 GMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDS 194
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
R F+ MP+++VVS+ +IAG +Q+ DA+++ +M + + P FT S++ S
Sbjct: 195 VRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSE 254
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
V G+++H +VI+ S + ++L+ MY K RI D+ VFS + +D SW S+
Sbjct: 255 YVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSL 314
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------- 251
+A + + G EAL F +M+ +P F SV AC++
Sbjct: 315 VAGYVQNGRYNEALRLFRQMV-TAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGG 373
Query: 252 -----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
AR +F+ ++ D SW A+I G A H + +EA+SLF
Sbjct: 374 FGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFE 433
Query: 289 EMRDRELLPDGLTVHSLLCAC--IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
EM+ + + P+ + ++L AC +G + G +S G + + A+ + +
Sbjct: 434 EMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGY-FNSMTKVYGLNQELEHYAAVADLLGR 492
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A ++ W++++++C H E
Sbjct: 493 AGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLE 529
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/469 (32%), Positives = 249/469 (53%), Gaps = 38/469 (8%)
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
C QN +K +Q+L P + ++I++C + G+++H H+ S
Sbjct: 50 CQQN-----RLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPG 104
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
L N L+ MY K D ++D++ +F + +D+ SW +I+ ++K+G EA
Sbjct: 105 LFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEA--------- 155
Query: 231 HGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ LF+++ D SW A+I+G H NEA+ LF M
Sbjct: 156 ----------------------KSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMM 193
Query: 291 -RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
R + TV S L A L G ++H YI++ G DS+ V +A+ MY KC
Sbjct: 194 KRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGS 253
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ A +F ++ + D V+W ++I Q + +E F LF+ +L S I+P+ TF+ V+
Sbjct: 254 IEEARHIFDKM-VDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLN 312
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
ACA S E+ ++H Y+T+ G F + L+ +Y KCG++ SA ++F PD+ S
Sbjct: 313 ACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFS 372
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+SLI GYAQ G DEA++ F + G P+ +T VGVL+AC+H GLV++GL + ++
Sbjct: 373 WTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIK 432
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+YG+ T +H +C++DLLAR+G EAE+ I++M+ D +W SLL
Sbjct: 433 EQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLG 481
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 133/513 (25%), Positives = 221/513 (43%), Gaps = 90/513 (17%)
Query: 3 NDYVSSLCKQNLYNEAL-VAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
++ + LC+QN EAL + + + + S Y+ LI +C R LQ G+KVH HI
Sbjct: 43 DEAIHILCQQNRLKEALQILHQIDKPSA------SVYSTLIQSCIKSRLLQQGKKVHQHI 96
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLED-----------------------ARMG------ 92
LS P + + N +L MY KC SL D A+MG
Sbjct: 97 KLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAK 156
Query: 93 --FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGL 149
FDKMP+R+ SWTAMI+G ++ + N+A++L+ M +S +FT S + A + +
Sbjct: 157 SLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAV 216
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
+ +G+++H +++++ S + +AL MY K I +AR++F + +D+ +W +MI
Sbjct: 217 PCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMI 276
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------- 250
+ + G E F ++L G +PNEF F V +AC+N
Sbjct: 277 DRYFQDGRRKEGFDLFADLLRSGI-RPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGF 335
Query: 251 ---------------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
A +F E PDL SW +LIAG A + +EA+ F
Sbjct: 336 DPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFEL 395
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+ PD +T +L AC + +G+ HS + G I+ + A+
Sbjct: 396 LVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSG 455
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRLFSRMLASQIKPDH 401
A + ++ D W S++ C H AE LF + A+ + +
Sbjct: 456 QFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLAN 515
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
I G +++A + + K GL++
Sbjct: 516 IY--ATAGMWSEVAKIRKTMDDRGVVKKPGLSW 546
>gi|15237290|ref|NP_200097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171558|sp|Q9FLX6.1|PP430_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g52850, chloroplastic; Flags: Precursor
gi|10177099|dbj|BAB10433.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008885|gb|AED96268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 893
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/582 (27%), Positives = 295/582 (50%), Gaps = 44/582 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T++ ++ +C+ LR + G +VH ++ + + + V+ + + ++Y KCG ++A F +
Sbjct: 126 TFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSL 185
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ +SWT MI+ + +A++ Y +M+++GV P +FTF ++ A S LG + G+
Sbjct: 186 QNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGK 244
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H+++I +++ + +L+ Y++F ++ DA V + +DV W S+++ F +
Sbjct: 245 TIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNL 304
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARIL---------------- 255
EA+ F EM G QPN F + ++ S CS +F + +
Sbjct: 305 RAKEAVGTFLEMRSLG-LQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVG 363
Query: 256 --------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
F + SP++ SW LI G+ H + L EM RE+
Sbjct: 364 NALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ +T+ +L AC + + +++H+Y+++ D + V N+++ YA + A
Sbjct: 424 EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWN 483
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
V + + K D++++ S++ + + E + + M I+ D ++ + A A +
Sbjct: 484 VIRSM-KRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLG 542
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+LE LHCY K+G + V+N L+D+Y KCGSL A+K+F + PDVVSW+ L+
Sbjct: 543 ALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVS 602
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
G A G AL F MR P+ VT + +L+ACS+ L + GL +++M+ Y I
Sbjct: 603 GLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIE 662
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
P EH +V +L RAG + EA + M + +++K+LL
Sbjct: 663 PQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLL 704
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 151/578 (26%), Positives = 288/578 (49%), Gaps = 45/578 (7%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++S C S S ++G +H ++ ++ L N++L++Y K + +AR FD+M R
Sbjct: 30 ILSFCES-NSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRT 88
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
V +WT MI+ +++ + A+ L+ +M+ SG P +FTF S++++C+GL + G ++H
Sbjct: 89 VFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHG 148
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
VIK+ + + ++L +Y+K + +A +FS + D SW MI++ E
Sbjct: 149 SVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWRE 208
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSAC-------------------------------- 248
AL ++EM+ G PNEF F + A
Sbjct: 209 ALQFYSEMVKAGV-PPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVD 267
Query: 249 --SNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
S F+++ + N D+ W ++++G + A EA+ F EMR L P+ T
Sbjct: 268 FYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFT 327
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV-LCNALLVFKEL 360
++L C +L G Q+HS IK+GF+ + V NA++ MY KCS A VF +
Sbjct: 328 YSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM 387
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
+ + VSW ++I + H ++ F L M+ +++P+ +T + V+ AC+K+ + V
Sbjct: 388 -VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRV 446
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
++H Y+ + + ++ V N L+D Y + A + M+ D ++++SL+ + +
Sbjct: 447 LEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNEL 506
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
G + AL + M G+ + ++L G ++A +++G +E G HL+ + G
Sbjct: 507 GKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLH-CYSVKSGFSGAASV 565
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +VD+ ++ G + +A+ ++A D+V W L++
Sbjct: 566 LNSLVDMYSKCGSLEDAKKVFEEIAT-PDVVSWNGLVS 602
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 198/451 (43%), Gaps = 51/451 (11%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILL 63
+SSL + EAL F + P+ T+ L+ A SS L+ G+ +H +I++
Sbjct: 197 ISSLVGARKWREAL---QFYSEMVKAGVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIV 252
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
+VVL+ +++ Y + +EDA + +++V WT++++G +N + +A+
Sbjct: 253 RGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGT 312
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+++M G+ P FT+ +I+ CS + S+ G+Q+H+ IK NAL+ MY K
Sbjct: 313 FLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK 372
Query: 184 FD-RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
++A VF + +V SW ++I G+ + EM+ +PN
Sbjct: 373 CSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR-EVEPNVVTLS 431
Query: 243 SVFSACSNF----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
V ACS A +L +D ++ N+L+ AS + A ++ M+
Sbjct: 432 GVLRACSKLRHVRRVLEIHAYLLRRHVDG-EMVVGNSLVDAYASSRKVDYAWNVIRSMKR 490
Query: 293 RELLP-------------------------------DGLTVHSLLCACIGRLTLYQGMQV 321
R+ + D L++ + A L G +
Sbjct: 491 RDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHL 550
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H Y +K GF V N+++ MY+KC L +A VF+E+ D VSWN +++ +
Sbjct: 551 HCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVSGLASNGF 609
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACA 412
F M + +PD +TF ++ AC+
Sbjct: 610 ISSALSAFEEMRMKETEPDSVTFLILLSACS 640
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IR+ + G ISA ++L +L+ G+ +H + + S + N +++MY KCGSLEDA+
Sbjct: 524 IRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAK 583
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS--- 147
F+++ +VVSW +++G + N + A+ + +M P TF ++ ACS
Sbjct: 584 KVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGR 643
Query: 148 ----GLGSVCLGRQLHAHVIKSEHGSHLIA 173
GL + ++++ + EH HL+
Sbjct: 644 LTDLGLEYFQVMKKIYNIEPQVEHYVHLVG 673
>gi|302760285|ref|XP_002963565.1| hypothetical protein SELMODRAFT_79889 [Selaginella moellendorffii]
gi|300168833|gb|EFJ35436.1| hypothetical protein SELMODRAFT_79889 [Selaginella moellendorffii]
Length = 641
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 187/601 (31%), Positives = 290/601 (48%), Gaps = 60/601 (9%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHI------LLSKCQPDVVLQNHILNMYGKCGSL 86
I Y L+ AC S RSL G +H I LL P L H+ +MY +C SL
Sbjct: 7 IDAEGYCSLLRACGSSRSLDDGWAIHARIIAHSAGLLESSNP--FLAAHLFHMYLRCHSL 64
Query: 87 EDARMGFDKMP-QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
DA FD++P +R+VV WTA I + Q + A++ Y +ML G TF +++ A
Sbjct: 65 RDAIEVFDRIPGRRSVVLWTAAIGAYADAGQSSTALRFYRRMLLDGERADPITFITVLGA 124
Query: 146 CSGLGSVCLGRQLHAHVIKSEHG-SHLIA-QNALIAMYTKFDRILDARNVFSGIARKDVT 203
CS S LG ++ ++ S G SH NA+I+MY + A +F+G+ +D+
Sbjct: 125 CS---SARLGEAIYFQILASGFGRSHATKLGNAIISMYGRCGSAGSAAGIFAGMRERDLI 181
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------ 251
+W SMI AF+K G +A+ F M G ++ N SV ACS+
Sbjct: 182 TWTSMIHAFAKTGQNRDAILCFRSM-QQGGFRANAVTIVSVLGACSDVEDGRIIHRIASD 240
Query: 252 --------------------------ARILFNEIDSPD-LASWNALIAGVASHSNANEAM 284
AR +F EI + + SWN +++ EA+
Sbjct: 241 AGFLRENPLAANAVINMYGKSGNLAEARGVFREIYASQCVISWNTMMSACIQQERDEEAL 300
Query: 285 SLFSEM-RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF--DSNVPVCNAIL 341
+LF EM + PD ++ L AC L G +H+ +++G N + N +L
Sbjct: 301 ALFQEMISTGSIAPDNVSCVLALTACANLEALEAGEAIHAIALEIGLLVIENPVLINCVL 360
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+Y +C L A +F+E + VS N+II A QH + +E +F M + I+P
Sbjct: 361 HLYGRCGRLDRAAAIFREHRGDESLVSSNTIIGAFAQHGRWKEALAIFRGMQIAGIRPSK 420
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
+TF V+ CA +++L +H GL + V L+D+Y +CG L A+ +F+
Sbjct: 421 LTFAAVLDGCANLSALAEGRSIHALAAALGLEQEAVVATSLVDMYGRCGCLAIAQGIFDG 480
Query: 462 M--ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
M +N + ++WS+L YA G +A+K+ RM+ GV + V VL +CSH G++E
Sbjct: 481 MPAKNKNELAWSTLFGAYAHRGRLGQAMKILGRMQQEGVKIHPALFVSVLNSCSHAGMLE 540
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM-ACDADIVVWKSLLA 578
E L + M ++GI P EH CV+DLL R G + EAE F+ ++ ++++W S L
Sbjct: 541 ECLRQFASMRLDHGIQPKVEHFGCVIDLLGRLGALAEAERFMGRIPGGRPNLLIWMSFLG 600
Query: 579 S 579
S
Sbjct: 601 S 601
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 12/173 (6%)
Query: 2 SNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHD 59
SN + + + + EAL + Q IRPS T+A ++ C++L +L GR +H
Sbjct: 388 SNTIIGAFAQHGRWKEALAIFRGMQIAG---IRPSKLTFAAVLDGCANLSALAEGRSIHA 444
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP--QRNVVSWTAMIAGCSQNYQE 117
+ + V+ +++MYG+CG L A+ FD MP +N ++W+ + + +
Sbjct: 445 LAAALGLEQEAVVATSLVDMYGRCGCLAIAQGIFDGMPAKNKNELAWSTLFGAYAHRGRL 504
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACS--GLGSVCLGRQLHAHVIKSEHG 168
A+K+ +M Q GV F S++ +CS G+ CL RQ + ++ +HG
Sbjct: 505 GQAMKILGRMQQEGVKIHPALFVSVLNSCSHAGMLEECL-RQFAS--MRLDHG 554
>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 753
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 178/598 (29%), Positives = 294/598 (49%), Gaps = 50/598 (8%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
N + Y L + SL LG+ H H++ S P + L N++LNMY KC L A
Sbjct: 43 NTALDSEAYKKLFQTAAKSGSLVLGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFA 102
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD+MP+RN++S+ ++I+G +Q A++L+++ + +FT+ + C
Sbjct: 103 RQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGER 162
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
+ G+ LH V+ + + N LI MY+K ++ A ++F +D SW S+I
Sbjct: 163 CDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLI 222
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--------------------- 248
+ + ++G E L +M H + + GSV AC
Sbjct: 223 SGYVRVGAAEEPLNLLAKM-HRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAK 281
Query: 249 --------------SNFAR--------ILFNEIDSPDLASWNALIAGVASHSN-----AN 281
+A+ LF+ + + ++ ++NA+I+G + ++
Sbjct: 282 LGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASS 341
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
EA LF EM+ R L P T +L AC TL G Q+H+ I K F S+ + +A++
Sbjct: 342 EAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALI 401
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+YA + + F K D SW SII +Q+ Q E F LF ++ +S I+P+
Sbjct: 402 ELYALMGSTEDGMQCFASTSKQ-DIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEE 460
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
T + +M ACA A+L Q+ Y K+G+ V + +Y K G++ A K+F
Sbjct: 461 YTVSLMMSACADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIE 520
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
++NPDV ++S++I AQ G +AL +F M++ G+ PN +GVL AC H GLV G
Sbjct: 521 VQNPDVATYSAMISSLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVLIACCHGGLVTHG 580
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++ ++ M+N YGI P +H +C+ DLL R G + +AE+ I V+W++LL+S
Sbjct: 581 VNYFQTMKNSYGINPNEKHFTCLADLLGRTGRLSDAENLILSSGFQDHPVMWRALLSS 638
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/503 (30%), Positives = 265/503 (52%), Gaps = 45/503 (8%)
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS--GVMPGQFTFGSII 143
L +A FD P R++ +WT++I+GC++ + D ++ + +ML P F ++
Sbjct: 74 LHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVL 133
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
+ C+GLG V GR++H +++S ++ NA++ MY K AR F +A+KD T
Sbjct: 134 RCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDAT 193
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPD 263
SW +I A + G + GA Q LF+E D
Sbjct: 194 SWNIVIRACLQDGDLV------------GATQ-------------------LFDESSLRD 222
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT----VHSLLCACIGRLTLYQ-G 318
++SWN +++G+ H + EA+ R ++++ G+T +S++ A G L+ G
Sbjct: 223 VSSWNTIVSGLMRHGHTTEALG-----RLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLG 277
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD--SVSWNSIIAAC 376
Q+H ++ + + V +++ MY KC + +AL +F + +W++++A
Sbjct: 278 RQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGY 337
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
+Q+ + EE F RML + V ACA +E Q+H ++ K G FD
Sbjct: 338 VQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDA 397
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
+ + ++D+Y K GSL A ++F + +V W++++ YA G G AL++F+RM++
Sbjct: 398 PLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAE 457
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
+ PN +TLV VL+ACSH GLV +G H + +M+ EYGI+P EH +C+VDL RAG + +
Sbjct: 458 KIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDK 517
Query: 557 AEDFINQMACDADIVVWKSLLAS 579
A++FI + + VVWK+LL++
Sbjct: 518 AKNFIEENKISHEAVVWKTLLSA 540
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 176/420 (41%), Gaps = 76/420 (18%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
AG++ C+ L ++ GR++H IL S PDVVL N +L+MY KCG AR F M Q
Sbjct: 130 AGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQ 189
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLY-------------------------------IQM 127
++ SW +I C Q+ A +L+ QM
Sbjct: 190 KDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQM 249
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
+++GV +T+ + L S LGRQLH V+ + +L+ MY K +
Sbjct: 250 VRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEM 309
Query: 188 LDARNVF---SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
A ++F S +W +M+A + + G E EAL F ML G +FI SV
Sbjct: 310 ESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGV-PAGQFILTSV 368
Query: 245 FSACSN------------FARILFNEIDSP----------------------------DL 264
SAC+N F L + D+P ++
Sbjct: 369 ASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNV 428
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
A W ++ ASH A+ +FS M+ +++P+ +T+ ++L AC + G +
Sbjct: 429 ALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNL 488
Query: 325 II-KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ + G N N ++ +Y + +L A +E + ++V W ++++AC H E
Sbjct: 489 MQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIE 548
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 123/251 (49%), Gaps = 5/251 (1%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS L + EAL + TY+ + + L S LGR++H ++
Sbjct: 227 NTIVSGLMRHGHTTEALGRLQ-QMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVV 285
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK---MPQRNVVSWTAMIAGCSQNYQEND 119
++ + D + +++MY KCG +E A FD+ + +W+ M+AG QN +E +
Sbjct: 286 VAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEE 345
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
A++ + +ML+ GV GQF S+ AC+ G V GRQ+H V K H +A++
Sbjct: 346 ALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVD 405
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY+K + DA +F K+V W +M+ +++ G AL F+ M PNE
Sbjct: 406 MYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAE-KIMPNEI 464
Query: 240 IFGSVFSACSN 250
+V SACS+
Sbjct: 465 TLVAVLSACSH 475
>gi|297841915|ref|XP_002888839.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334680|gb|EFH65098.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 682
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 274/542 (50%), Gaps = 33/542 (6%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A L+SAC + + G ++H H + S + L ++ Y +A+ +
Sbjct: 48 ASLLSACVDVLAFVPGLQIHAHCVSSGVEYHSALVPKLVTFYSAFNLHREAQSINENSDI 107
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+ + W +IA ++N + + Y +M+ G+ P FT+ S++KAC V GR +
Sbjct: 108 LHPLPWNVLIASYAKNELFEEVVAAYKRMVSKGIRPDAFTYPSVLKACGETLDVASGRVV 167
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H + S + L NALI+MY +F + AR +F ++ +D SW ++I ++ +G
Sbjct: 168 HGSIEVSSYKCSLYVCNALISMYKRFGNVGIARRLFDHMSERDAVSWNAVINCYASVGMW 227
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHS 278
EA F++M G E+ + +WN + G
Sbjct: 228 SEAFELFDKMRFSGV------------------------EVS---VITWNIISGGYLHTG 260
Query: 279 NANEAMSLFSEMRD--RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
N A+ L S MR+ L P + + C+ IG + L G ++H I +D V
Sbjct: 261 NYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRL--GKEIHGLAIHRSYDGIDNV 318
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
N ++TMY+KC L NA +VF++ +N+ +WNSII+ Q N++EE L ML +
Sbjct: 319 RNTLITMYSKCDDLRNAFIVFQKTEENS-LCTWNSIISGYAQVNKSEEASYLLREMLLAG 377
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD-VFVMNGLMDIYIKCGSLGSA 455
+P+ IT ++ CA++A+L+ + HCYI + D + N L+D+Y K G + +A
Sbjct: 378 FQPNFITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAA 437
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
+++ N M D V+++SLI GY G G AL LF M G+ P+ VT+V VL+ACSH
Sbjct: 438 KQVSNLMSEIDEVTYTSLIDGYGNQGEGRVALALFDEMIRSGIKPDPVTMVAVLSACSHS 497
Query: 516 GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
LV EG L+ M+ +YGI P +H SC+VDL RAG + +A+D I++M + W +
Sbjct: 498 KLVHEGQRLFMKMQPKYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHRMPYEPSGATWAT 557
Query: 576 LL 577
LL
Sbjct: 558 LL 559
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 190/466 (40%), Gaps = 95/466 (20%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N ++S K L+ E + AY + + IRP TY ++ AC + GR VH
Sbjct: 114 NVLIASYAKNELFEEVVAAY---KRMVSKGIRPDAFTYPSVLKACGETLDVASGRVVHGS 170
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
I +S + + + N +++MY + G++ AR FD M +R+ VSW A+I + ++A
Sbjct: 171 IEVSSYKCSLYVCNALISMYKRFGNVGIARRLFDHMSERDAVSWNAVINCYASVGMWSEA 230
Query: 121 IKLYIQMLQSGVMPGQFTFGSI-----------------------------------IKA 145
+L+ +M SGV T+ I +KA
Sbjct: 231 FELFDKMRFSGVEVSVITWNIISGGYLHTGNYVGALGLISRMRNFPTSLDPVAMIIGLKA 290
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
CS +G++ LG+++H I + +N LI MY+K D + +A VF + +W
Sbjct: 291 CSLIGAIRLGKEIHGLAIHRSYDGIDNVRNTLITMYSKCDDLRNAFIVFQKTEENSLCTW 350
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------- 254
S+I+ ++++ EA EML G +QPN S+ C+ A +
Sbjct: 351 NSIISGYAQVNKSEEASYLLREMLLAG-FQPNFITLASILPLCARIANLQHGKEFHCYIL 409
Query: 255 ---------------------------------LFNEIDSPDLASWNALIAGVASHSNAN 281
L +EID ++ +LI G +
Sbjct: 410 RRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSNLMSEIDE---VTYTSLIDGYGNQGEGR 466
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC---- 337
A++LF EM + PD +T+ ++L AC +++G ++ +KM + C
Sbjct: 467 VALALFDEMIRSGIKPDPVTMVAVLSACSHSKLVHEGQRL---FMKMQPKYGIRPCLQHF 523
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ ++ +Y + L A + + +W +++ AC H E
Sbjct: 524 SCMVDLYGRAGFLAKAKDIIHRMPYEPSGATWATLLNACHIHGNTE 569
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 167/564 (29%), Positives = 295/564 (52%), Gaps = 53/564 (9%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-- 99
+ AC L S GR +H I + + +V + N ++ MY +CGSLEDA + FD++ ++
Sbjct: 156 LKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGI 215
Query: 100 -NVVSWTAMIAGCSQNYQENDAIKLYIQM------LQSGVMPGQFTFGSIIKACSGLGSV 152
+V+SW +++A + A++L+ +M + + +I+ AC+ L ++
Sbjct: 216 DDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKAL 275
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
+++H++ I++ + NALI Y K + DA VF+ + KDV SW +M+ +
Sbjct: 276 PQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGY 335
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
++ G FG+ F N + E D+ +W+A+IA
Sbjct: 336 TQSGN-----------------------FGAAFELFENMRK----ENIPLDVITWSAVIA 368
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A + EA+ F +M P+ +T+ SLL AC L QGM++H+Y +K S
Sbjct: 369 GYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLS 428
Query: 333 ------------NVPVCNAILTMYAKCSVLCNALLVFKELGKNA-DSVSWNSIIAACLQH 379
++ V NA++ MY+KC A +F + + + V+W +I Q+
Sbjct: 429 LDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQY 488
Query: 380 NQAEELFRLFSRMLASQ--IKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFD 435
+ + ++FS M++ + P+ T + ++ ACA +A+L M Q+H Y+T+
Sbjct: 489 GDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSV 548
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
FV N L+D+Y KCG + +AR +F+ M + VSW+S++ GY G G EAL +F +M+
Sbjct: 549 YFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQK 608
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
G P+ ++ + +L ACSH G+V++GL+ + IM +Y ++ + EH +CV+DLLAR G +
Sbjct: 609 AGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLD 668
Query: 556 EAEDFINQMACDADIVVWKSLLAS 579
+A I +M + V+W +LL++
Sbjct: 669 KAWKTIQEMPMEPSAVIWVALLSA 692
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 198/452 (43%), Gaps = 95/452 (21%)
Query: 26 QNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS 85
+ TN R + ++ AC+SL++L +++H + + + D + N +++ Y KCGS
Sbjct: 250 EKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGS 309
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQN-------------YQEN-------------- 118
+ DA F+ M ++VVSW AM+ G +Q+ +EN
Sbjct: 310 MNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAG 369
Query: 119 --------DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS----- 165
+A+ + QM+ G P T S++ AC+ LG++ G ++HA+ +K
Sbjct: 370 YAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSL 429
Query: 166 -------EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD--VTSWGSMIAAFSKLG 216
G L+ NALI MY+K AR++F I R++ V +W MI +++ G
Sbjct: 430 DNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYG 489
Query: 217 YELEALCHFNEML-------------------------------------HHGAYQPNEF 239
+AL F+EM+ H Y+P+ +
Sbjct: 490 DSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVY 549
Query: 240 IFGS----VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
+ ++S C + AR +F+ + + SW ++++G H EA+ +F +M+
Sbjct: 550 FVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKA 609
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD--SNVPVCNAILTMYAKCSVLC 351
+PD ++ LL AC + QG+ I++ +D ++ ++ + A+C L
Sbjct: 610 GFVPDDISFLVLLYACSHSGMVDQGLNYFD-IMRRDYDVVASAEHYACVIDLLARCGRLD 668
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
A +E+ +V W ++++AC H+ E
Sbjct: 669 KAWKTIQEMPMEPSAVIWVALLSACRVHSNVE 700
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 22/267 (8%)
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
HSY+ + V + Y C +AL V + + + +V WN ++ ++
Sbjct: 77 HSYVSPKSLGTGV------VASYLACGATKDALSVLERVTPSP-AVWWNLLVREHIKEGH 129
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+ + RML + KPDH T + AC ++ S LH I G +VFV N
Sbjct: 130 LDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNA 189
Query: 442 LMDIYIKCGSLGSARKLFNFMENP---DVVSWSSLILGYAQFGCGDEALKLFTRM----- 493
L+ +Y +CGSL A +F+ + DV+SW+S++ + + AL+LF+ M
Sbjct: 190 LVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVH 249
Query: 494 -RSLGVSPNLVTLVGVLTACSHVGLVEE--GLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
++ +++++V +L AC+ + + + +H Y I G C+ ++D A+
Sbjct: 250 EKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRN---GTFADAFVCNALIDTYAK 306
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLL 577
G +++A N M D+V W +++
Sbjct: 307 CGSMNDAVKVFNVMEFK-DVVSWNAMV 332
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 168/545 (30%), Positives = 275/545 (50%), Gaps = 46/545 (8%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM---PG 135
+Y + SL A F++ P + V W A++ + + + L+ QM V P
Sbjct: 45 LYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPD 104
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
+T +K+CSGL + LG+ +H +K + S + +ALI +Y+K ++ DA VF+
Sbjct: 105 NYTVSIALKSCSGLQKLELGKMIHG-FLKKKIDSDMFVGSALIELYSKCGQMNDAVKVFT 163
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA--- 252
+ DV W S+I + + G AL F+ M+ P+ S SAC+ +
Sbjct: 164 EYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFN 223
Query: 253 ----------------------------------RI---LFNEIDSPDLASWNALIAGVA 275
RI LF E+ D+ SW++++A A
Sbjct: 224 LGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYA 283
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
+ A++LF+EM D+ + + +TV S L AC L +G Q+H + GF+ ++
Sbjct: 284 DNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDIT 343
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
V A++ MY KC NA+ +F + K D VSW + + + A + +F ML++
Sbjct: 344 VSTALMDMYLKCFSPENAIELFNRMPKK-DVVSWAVLFSGYAEIGMAHKSLGVFCNMLSN 402
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA 455
+PD I ++ A +++ ++ LH ++TK+G + F+ L+++Y KC S+ +A
Sbjct: 403 GTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNA 462
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNLVTLVGVLTACSH 514
K+F + + DVV+WSS+I Y G G+EALKL +M + V PN VT V +L+ACSH
Sbjct: 463 NKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSH 522
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
GL+EEG+ ++ +M NEY ++P EH +VDLL R G + +A D IN M A VW
Sbjct: 523 AGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWG 582
Query: 575 SLLAS 579
+LL +
Sbjct: 583 ALLGA 587
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 139/489 (28%), Positives = 230/489 (47%), Gaps = 53/489 (10%)
Query: 34 RPSTYAGLIS--ACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP Y I+ +CS L+ L+LG+ +H L K D+ + + ++ +Y KCG + DA
Sbjct: 102 RPDNYTVSIALKSCSGLQKLELGKMIHG-FLKKKIDSDMFVGSALIELYSKCGQMNDAVK 160
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ-SGVMPGQFTFGSIIKACSGLG 150
F + P+ +VV WT++I G QN A+ + +M+ V P T S AC+ L
Sbjct: 161 VFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLS 220
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
LGR +H V + + L N+++ +Y K I A N+F + KD+ SW SM+A
Sbjct: 221 DFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVA 280
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------- 254
++ G E AL FNEM+ + N S AC++ + +
Sbjct: 281 CYADNGAETNALNLFNEMIDK-RIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFE 339
Query: 255 ------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
LFN + D+ SW L +G A A++++ +F M
Sbjct: 340 LDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNM 399
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
PD + + +L A + Q + +H+++ K GFD+N + +++ +YAKCS +
Sbjct: 400 LSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSI 459
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA-SQIKPDHITFNDVMG 409
NA VFK L ++ D V+W+SIIAA H Q EE +L +M S +KP+ +TF ++
Sbjct: 460 DNANKVFKGL-RHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILS 518
Query: 410 ACAKMASLEM-VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME---NP 465
AC+ +E + H + + L ++ ++D+ + G L A + N M P
Sbjct: 519 ACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKALDMINNMPMQAGP 578
Query: 466 DVVSWSSLI 474
V W +L+
Sbjct: 579 HV--WGALL 585
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 176/386 (45%), Gaps = 41/386 (10%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P T SAC+ L LGR VH + + L N ILN+YGK GS+ A F
Sbjct: 206 PVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFR 265
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+MP ++++SW++M+A + N E +A+ L+ +M+ + + T S ++AC+ ++
Sbjct: 266 EMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEE 325
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+Q+H + + AL+ MY K +A +F+ + +KDV SW + + +++
Sbjct: 326 GKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAE 385
Query: 215 LGYELEALCHFNEMLHHG----------------------------------AYQPNEFI 240
+G ++L F ML +G + NEFI
Sbjct: 386 IGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFI 445
Query: 241 FGSV---FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR-E 294
S+ ++ CS+ A +F + D+ +W+++IA H EA+ L +M + +
Sbjct: 446 GASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSD 505
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ P+ +T S+L AC + +G+++ H + + N+ ++ + + L A
Sbjct: 506 VKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKA 565
Query: 354 LLVFKELGKNADSVSWNSIIAACLQH 379
L + + A W +++ AC H
Sbjct: 566 LDMINNMPMQAGPHVWGALLGACRIH 591
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 125/238 (52%), Gaps = 8/238 (3%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
NL+NE + + I + T + AC+S +L+ G+++H + + D+ +
Sbjct: 293 NLFNEMI--------DKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITV 344
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
+++MY KC S E+A F++MP+++VVSW + +G ++ + ++ ++ ML +G
Sbjct: 345 STALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGT 404
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
P I+ A S LG V LHA V KS ++ +LI +Y K I +A
Sbjct: 405 RPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANK 464
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
VF G+ DV +W S+IAA+ G EAL ++M +H +PN+ F S+ SACS+
Sbjct: 465 VFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSH 522
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 150/293 (51%), Gaps = 17/293 (5%)
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M+ R+LL LL C ++++ Q+HS +K+G + V + +YA+ +
Sbjct: 1 MKRRDLLV------KLLETCCSKISI---TQLHSQCLKVGLALDSFVVTKLNVLYARYAS 51
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI---KPDHITFND 406
LC+A +F+E + WN+++ + + E LF +M A + +PD+ T +
Sbjct: 52 LCHAHKLFEETPCKTVYL-WNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSI 110
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
+ +C+ + LE+ +H ++ K + D+FV + L+++Y KCG + A K+F PD
Sbjct: 111 ALKSCSGLQKLELGKMIHGFLKKK-IDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPD 169
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSL-GVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
VV W+S+I GY Q G + AL F+RM L VSP+ VTLV +AC+ + G ++
Sbjct: 170 VVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVH 229
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++ G + +++L + G + A + +M DI+ W S++A
Sbjct: 230 GFVKRR-GFDTKLCLANSILNLYGKTGSIRIAANLFREMPYK-DIISWSSMVA 280
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 149/462 (32%), Positives = 249/462 (53%), Gaps = 45/462 (9%)
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
A+ Y M + + F S++KACS + +G+++H +K+ S + NAL+
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY++ ++ AR +F ++ +DV SW +MI A+ L Y
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYG--------------------- 191
Query: 240 IFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
FS S + SW A+IAG ++ E LF M + + P+
Sbjct: 192 -----FSQRS--------------IVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPND 232
Query: 300 LTVHSLLCAC--IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+T+ SL+ +C +G + L G ++H+YI++ GF ++ + A++ MY KC + +A +F
Sbjct: 233 ITMLSLIISCGFVGAVQL--GKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIF 290
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+ KN D ++W ++I+A Q N + F+LF +M + ++P+ +T ++ CA +L
Sbjct: 291 DSM-KNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGAL 349
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
+M H YI K G+ DV + L+D+Y KCG + A++LF+ + D+ +W+ ++ GY
Sbjct: 350 DMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGY 409
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
G G++ALKLFT M +LGV PN +T +G L ACSH GLV EG L+ M +++G++P
Sbjct: 410 GMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPK 469
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH C+VDLL RAG + EA I M +I +W ++LA+
Sbjct: 470 VEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 206/467 (44%), Gaps = 77/467 (16%)
Query: 18 ALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHIL 77
AL Y + + +I + ++ ACS + ++G+++H + + DV + N ++
Sbjct: 93 ALNTYTYMRK-LDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALM 151
Query: 78 NMYGKCGSLEDARMGFDKMP----------------------QRNVVSWTAMIAGCSQNY 115
MY +CGSL AR+ FDKM QR++VSWTAMIAG +
Sbjct: 152 QMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCN 211
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+ +L+++M++ V P T S+I +C +G+V LG++LHA+++++ G L
Sbjct: 212 DLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALAT 271
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
AL+ MY K I AR +F + KDV +W +MI+A+++ A F +M +G +
Sbjct: 272 ALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGV-R 330
Query: 236 PNEFIFGSVFSACS----------------------------------------NFARIL 255
PNE S+ S C+ + A+ L
Sbjct: 331 PNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRL 390
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F+E D+ +WN ++AG H +A+ LF+EM + P+ +T L AC +
Sbjct: 391 FSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLV 450
Query: 316 YQGMQVHSYII-KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
+G + +I G V ++ + + +L A + + + + W +++A
Sbjct: 451 VEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLA 510
Query: 375 ACLQHNQ-------AEELFRLFS-----RMLASQIKPDHITFNDVMG 409
AC H A EL L ++L S I +NDV G
Sbjct: 511 ACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAG 557
>gi|115460348|ref|NP_001053774.1| Os04g0602600 [Oryza sativa Japonica Group]
gi|38344148|emb|CAE01824.2| OSJNBa0041A02.15 [Oryza sativa Japonica Group]
gi|113565345|dbj|BAF15688.1| Os04g0602600 [Oryza sativa Japonica Group]
gi|125549608|gb|EAY95430.1| hypothetical protein OsI_17272 [Oryza sativa Indica Group]
Length = 804
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 191/622 (30%), Positives = 311/622 (50%), Gaps = 60/622 (9%)
Query: 14 LYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILL-SKCQPDV 70
L EAL Y + +R TY+ ++AC+ R L+LGR VH H+L ++ PD
Sbjct: 82 LPEEALRLYALLNHAARPPVRSDHYTYSAALTACARSRRLRLGRSVHAHMLRRARSLPDT 141
Query: 71 -VLQNHILNMYGKCGSLEDARMG-----FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
VL+N +LN+Y +AR+ FD MP+RNVVSW + + + +A++L+
Sbjct: 142 AVLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELF 201
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK--SEHGSHLIAQNALIAMYT 182
++ML+ G P +F +I A QL+ ++K E+ + L ++ I M++
Sbjct: 202 VRMLEDGFRPTPVSFVNIFPAAVA-DDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFS 260
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH------------ 230
+F + AR VF A+K+ W +MI + + G EA+ F+++L
Sbjct: 261 EFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFL 320
Query: 231 -----------------------HGAYQPNEFIFGS----VFSACSNF--ARILFNEIDS 261
G ++ I G+ ++S C N A LF+ +
Sbjct: 321 SALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPE 380
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
D+ +WN ++ + E + L EM+ D +T+ ++L A L G Q
Sbjct: 381 KDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQA 440
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA--DSVSWNSIIAACLQH 379
H Y+I+ G + + + ++ MYAK + A VF KNA D V+WN++IA Q
Sbjct: 441 HGYLIRHGIEGE-GLESYLIDMYAKSGRVEMAQRVFDSF-KNAKRDEVTWNAMIAGYTQS 498
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS-LEMVTQLHCYITKTGLAFDVFV 438
Q E+ +F ML + ++P +T V+ AC + + Q+HC+ + L +VFV
Sbjct: 499 GQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFV 558
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
L+D+Y KCG + +A +F M V+++++I G Q G G +AL LF M+ G+
Sbjct: 559 GTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGL 618
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAE 558
P+ VT + ++AC++ GLV+EGL LYR M++ +GI T +H CV DLLA+AG V EA
Sbjct: 619 KPDAVTFLSAISACNYSGLVDEGLALYRSMDS-FGISATPQHHCCVADLLAKAGRVEEAY 677
Query: 559 DFINQMACDADIV-VWKSLLAS 579
+FI + + + V +W SLLAS
Sbjct: 678 EFIEGLGEEGNFVAIWGSLLAS 699
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 202/438 (46%), Gaps = 52/438 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + ++EA+ + + + + T+ ++A S + + LG+++H +++
Sbjct: 284 NTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLI 343
Query: 63 --LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ + P V+L N ++ MY +CG+++ A FD++P++++V+W M+ QN + +
Sbjct: 344 KGMHRTLP-VILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEG 402
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA-QNALIA 179
+ L +M +SG T +++ A S G + +G+Q H ++I+ HG ++ LI
Sbjct: 403 LLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIR--HGIEGEGLESYLID 460
Query: 180 MYTKFDRILDARNVFSGI--ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
MY K R+ A+ VF A++D +W +MIA +++ G +A+ F ML G +P
Sbjct: 461 MYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAG-LEPT 519
Query: 238 EFIFGSVFSACS-----------------------------------------NFARILF 256
SV AC A +F
Sbjct: 520 SVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVF 579
Query: 257 NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
+ ++ +I+G+ H +A++LF+ M+++ L PD +T S + AC +
Sbjct: 580 GGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVD 639
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS-WNSIIAA 375
+G+ ++ + G + + + AK + A + LG+ + V+ W S++A+
Sbjct: 640 EGLALYRSMDSFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLAS 699
Query: 376 CLQHNQAEELFRLFSRML 393
C + +EL +L ++ L
Sbjct: 700 CKAQGK-QELAKLVTKKL 716
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 27/239 (11%)
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
++LCNALL+ AA +A L+ L + ++ DH T++
Sbjct: 67 TLLCNALLI---------------AYAARALPEEALRLYALLNHAARPPVRSDHYTYSAA 111
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAF-DVFVM-NGLMDIY-----IKCGSLGSARKLFN 460
+ ACA+ L + +H ++ + + D V+ N L+++Y + + R+LF+
Sbjct: 112 LTACARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFD 171
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
M +VVSW++L Y + G EAL+LF RM G P V+ V + A
Sbjct: 172 AMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAV-ADDPSW 230
Query: 521 GLHLYRIMENEYGI--IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
LY ++ +YG+ I S +D+ + G V A ++ A + VW +++
Sbjct: 231 PFQLYGLLV-KYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDR-AAKKNTEVWNTMI 287
>gi|449531597|ref|XP_004172772.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Cucumis sativus]
Length = 680
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 173/612 (28%), Positives = 296/612 (48%), Gaps = 81/612 (13%)
Query: 45 CSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSW 104
C+++R+ + G +H ++ DV L N++++MY + ++ DA FD+M RN+V+W
Sbjct: 13 CATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNIVTW 72
Query: 105 TAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK 164
T M++ + + +AI+LY M +S P + + +++KAC +G + LG+ + + +
Sbjct: 73 TTMVSAFTDGGRPYEAIRLYNDMPKSET-PNGYMYSAVLKACGFVGDLGLGKLIQERIYE 131
Query: 165 SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR------------------------- 199
+ + I N+L+ M+ K + DA VF I+R
Sbjct: 132 DKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEAEKL 191
Query: 200 ------KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF----------GS 243
+V SW SMIA F+ G + AL F M+H + ++F F G
Sbjct: 192 FHCMPHPNVVSWNSMIAGFADNGSQ-RAL-EFVSMMHKRCIKLDDFTFPCALKISALHGL 249
Query: 244 VF---------------SACSNFARIL---------------------FNEIDSPDLASW 267
+F S+C + ++ FN S +LA W
Sbjct: 250 LFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLALW 309
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
N++++G ++ A++L SE+ L D T L CI L+ G+Q+H I+
Sbjct: 310 NSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGLIVT 369
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
G++ + V + ++ +YAK + + +AL +F L + D ++W+ +I C Q F
Sbjct: 370 CGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRK-DIIAWSGLIMGCAQIGLNWLAFS 428
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
+F ML + DH + ++ C+ +ASL Q+H K+G + F + L+D+Y
Sbjct: 429 MFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYS 488
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
KCG + A LF + D+VSW+ +I+G Q G EA++ F M G++PN +T +G
Sbjct: 489 KCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITFLG 548
Query: 508 VLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
VL+AC + GLVEE ++ M++ YG+ P EH C+VDLLA G EAE I M +
Sbjct: 549 VLSACRYAGLVEEARSIFNSMKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIANMPFE 608
Query: 568 ADIVVWKSLLAS 579
+ W++LL +
Sbjct: 609 PNQTTWRTLLGA 620
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 138/557 (24%), Positives = 222/557 (39%), Gaps = 123/557 (22%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA-------- 89
Y+ ++ AC + L LG+ + + I K Q D +L N +++M+ KCGSL DA
Sbjct: 106 YSAVLKACGFVGDLGLGKLIQERIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNIS 165
Query: 90 ----------RMGFDK-------------MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
G+ K MP NVVSW +MIAG + N + A++
Sbjct: 166 RATTTTWNIIVSGYSKAGLMVEAEKLFHCMPHPNVVSWNSMIAGFADNGSQR-ALEFVSM 224
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD- 185
M + + FTF +K + G + +G+Q+H++V K + S +ALI MY+ +
Sbjct: 225 MHKRCIKLDDFTFPCALKISALHGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCND 284
Query: 186 -----RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
++ D + F+ ++ W SM++ + + AL +E+ GA + +
Sbjct: 285 LIEAVKLFDQHSSFNASISDNLALWNSMLSGYVINNCDQAALNLLSEIHCSGALL-DSYT 343
Query: 241 FGSVFSACSNF----------------------------------------ARILFNEID 260
FG C N A +F+ +
Sbjct: 344 FGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLP 403
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D+ +W+ LI G A A S+F M + D + ++L C +L G Q
Sbjct: 404 RKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQ 463
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
VH+ +K G++ ++L MY+KC + +AL +F + D VSW II C Q+
Sbjct: 464 VHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFC-CEQEKDIVSWTGIIVGCGQNG 522
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
+A E R F M+ S I P+ ITF V+ AC +E
Sbjct: 523 KAAEAVRFFHEMIRSGITPNEITFLGVLSACRYAGLVE---------------------- 560
Query: 441 GLMDIYIKCGSLGSARKLFNFMEN-----PDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
AR +FN M++ P + + ++ A G +EA KL M
Sbjct: 561 -------------EARSIFNSMKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIANMP- 606
Query: 496 LGVSPNLVTLVGVLTAC 512
PN T +L AC
Sbjct: 607 --FEPNQTTWRTLLGAC 621
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 117/512 (22%), Positives = 214/512 (41%), Gaps = 83/512 (16%)
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
++ C+ + + G +HA++ K + + N LI+MY +F + DA VF + +++
Sbjct: 10 LRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNI 69
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------- 249
+W +M++AF+ G EA+ +N+M + PN +++ +V AC
Sbjct: 70 VTWTTMVSAFTDGGRPYEAIRLYNDMPK--SETPNGYMYSAVLKACGFVGDLGLGKLIQE 127
Query: 250 ---------------------------NFARILFNEIDSPDLASWNALIAGVAS------ 276
N A +F+ I +WN +++G +
Sbjct: 128 RIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVE 187
Query: 277 ---------HSN---------------ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
H N + A+ S M R + D T L
Sbjct: 188 AEKLFHCMPHPNVVSWNSMIAGFADNGSQRALEFVSMMHKRCIKLDDFTFPCALKISALH 247
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS---- 368
L+ G QVHSY+ K+G++S+ +A++ MY+ C+ L A+ +F + S+S
Sbjct: 248 GLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLA 307
Query: 369 -WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
WNS+++ + +N + L S + S D TF + C + S + QLH I
Sbjct: 308 LWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGLI 367
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
G D V + L+D+Y K ++ A +F+ + D+++WS LI+G AQ G A
Sbjct: 368 VTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLAF 427
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
+F M L + + +L CS++ + G ++ + G + ++D+
Sbjct: 428 SMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKS-GYEMEGFTITSLLDM 486
Query: 548 LARAGCVHEAEDFINQMAC--DADIVVWKSLL 577
++ G E ED + C + DIV W ++
Sbjct: 487 YSKCG---EIEDALTLFCCEQEKDIVSWTGII 515
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 143/286 (50%), Gaps = 14/286 (4%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ G + C +L S ++G ++H I+ + D V+ + ++++Y K +++DA F ++
Sbjct: 343 TFGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRL 402
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P++++++W+ +I GC+Q A ++ ML+ F +I+K CS L S+ G+
Sbjct: 403 PRKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGK 462
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+HA +KS + +L+ MY+K I DA +F KD+ SW +I + G
Sbjct: 463 QVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNG 522
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFNEIDS-----PDLAS 266
EA+ F+EM+ G PNE F V SAC AR +FN + S P L
Sbjct: 523 KAAEAVRFFHEMIRSGI-TPNEITFLGVLSACRYAGLVEEARSIFNSMKSVYGLEPHLEH 581
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
+ ++ +AS EA L + M P+ T +LL AC R
Sbjct: 582 YCCMVDLLASVGLPEEAEKLIANM---PFEPNQTTWRTLLGACGTR 624
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 158/397 (39%), Gaps = 58/397 (14%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ------RNVVSW 104
L +G++VH ++ + + +++MY C L +A FD+ N+ W
Sbjct: 250 LFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLALW 309
Query: 105 TAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK 164
+M++G N + A+ L ++ SG + +TFG +K C L S +G QLH ++
Sbjct: 310 NSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGLIVT 369
Query: 165 SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCH 224
+ + + L+ +Y K I DA +F + RKD+ +W +I +++G A
Sbjct: 370 CGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLAFSM 429
Query: 225 FNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------------------ 254
F ML + + F+ ++ CSN A +
Sbjct: 430 FKGMLEL-VNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYS 488
Query: 255 ----------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
LF D+ SW +I G + A EA+ F EM + P+ +T
Sbjct: 489 KCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITFLG 548
Query: 305 LLCACIGRLTLYQGM--QVHSYIIKM----GFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+L AC Y G+ + S M G + ++ ++ + A + A +
Sbjct: 549 VLSAC-----RYAGLVEEARSIFNSMKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIA 603
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
+ + +W +++ AC N + + R+ +L +
Sbjct: 604 NMPFEPNQTTWRTLLGACGTRNDTKLINRVADGLLEA 640
>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 700
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 159/536 (29%), Positives = 267/536 (49%), Gaps = 44/536 (8%)
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY--IQMLQSGVMPGQFTFGS 141
G+L AR FDKMP R++VSWTA+I G ++A+ L+ ++++ V P
Sbjct: 48 GNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSV 107
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
++KAC ++ G LHA+ +K+ S + ++L+ MY + +I + VFS + ++
Sbjct: 108 VLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFRN 167
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------- 254
+W ++I G E L +F+EM + F F AC+ ++
Sbjct: 168 AVTWTAIITGLVHAGRYKEGLTYFSEMSSS-EELSDTFTFAIALKACAGLRQVKYGKQIH 226
Query: 255 ---------------------------------LFNEIDSPDLASWNALIAGVASHSNAN 281
LF + D+ SW +LI +
Sbjct: 227 THVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEE 286
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
+A+ F +MR+ ++ P+ T ++ AC L G Q+H + +G + ++ V N+++
Sbjct: 287 KAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMM 346
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
MY+ C L +A ++F+ + + D +SW++II Q EE F+ FS M S KP
Sbjct: 347 KMYSTCGKLDSASVLFQGM-RCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTD 405
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
++ MA LE Q+H GL + V + L+++Y KCG++ A K+F
Sbjct: 406 FALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEE 465
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
+ D+VS +++I GYA+ G EA+ LF + +G SP+ VT + VLTAC+H G ++ G
Sbjct: 466 TDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSGQLDLG 525
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
H + +M+ +Y + P +EH C+VDLL RAG + EAE I++M+ D VVW +LL
Sbjct: 526 FHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLL 581
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 180/402 (44%), Gaps = 50/402 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+A + AC+ LR ++ G+++H H+++ V + N + MY +CG + D F+ M
Sbjct: 205 TFAIALKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENM 264
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R+VVSWT++I ++ E A++ +I+M S V P + TF ++ AC+ L + G
Sbjct: 265 SERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGE 324
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
QLH +V L N+++ MY+ ++ A +F G+ +D+ SW ++I +S+ G
Sbjct: 325 QLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAG 384
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
+ EA +F+ M G +P +F S+ S N A +
Sbjct: 385 FGEEAFKYFSWMRQSGP-KPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVR 443
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+F E D D+ S A+I G A H + EA+ LF +
Sbjct: 444 STLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFS 503
Query: 297 PDGLTVHSLLCACI--GRLTL---YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
PD +T S+L AC G+L L Y + Y ++ + ++ + + L
Sbjct: 504 PDSVTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEHY----GCMVDLLCRAGRLS 559
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
A + E+ D V W +++ AC E R R+L
Sbjct: 560 EAEKMIDEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERIL 601
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 19/341 (5%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
+ E V N+ + T+A + SAC+SL L G ++H ++ + + N
Sbjct: 284 HEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSN 343
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
++ MY CG L+ A + F M R+++SW+ +I G SQ +A K + M QSG P
Sbjct: 344 SMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKP 403
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
F S++ + + GRQ+HA + ++ LI MY+K I +A +F
Sbjct: 404 TDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIF 463
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
R D+ S +MI +++ G EA+ F + L G + P+ F SV +AC++ ++
Sbjct: 464 EETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVG-FSPDSVTFISVLTACTHSGQL 522
Query: 255 -----LFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
FN + P + ++ + +EA + EM ++ D + +
Sbjct: 523 DLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSWKK---DDVVWTT 579
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
LL AC + + +G + I+++ P C L A
Sbjct: 580 LLIACKAKGDIERGRRAAERILELD-----PTCATALVTLA 615
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 8/147 (5%)
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
F N + I G+L AR++F+ M + D+VSW+++I GY DEA+ LF+ MR
Sbjct: 34 TFDTNSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRV 93
Query: 496 L--GVSPNLVTLVGVLTACSHVGLVE--EGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
+ VSP+ + VL AC + E LH Y + + ++ + S ++D+ R
Sbjct: 94 VDPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAV---KTSLLSSVFVGSSLLDMYKRV 150
Query: 552 GCVHEAEDFINQMACDADIVVWKSLLA 578
G + ++ ++M + V W +++
Sbjct: 151 GKIEKSCRVFSEMPF-RNAVTWTAIIT 176
>gi|449445246|ref|XP_004140384.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Cucumis sativus]
Length = 688
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 173/612 (28%), Positives = 296/612 (48%), Gaps = 81/612 (13%)
Query: 45 CSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSW 104
C+++R+ + G +H ++ DV L N++++MY + ++ DA FD+M RN+V+W
Sbjct: 13 CATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNIVTW 72
Query: 105 TAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK 164
T M++ + + +AI+LY M +S P + + +++KAC +G + LG+ + + +
Sbjct: 73 TTMVSAFTDGGRPYEAIRLYNDMPKSET-PNGYMYSAVLKACGFVGDLGLGKLIQERIYE 131
Query: 165 SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR------------------------- 199
+ + I N+L+ M+ K + DA VF I+R
Sbjct: 132 DKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEAEKL 191
Query: 200 ------KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF----------GS 243
+V SW SMIA F+ G + AL F M+H + ++F F G
Sbjct: 192 FHCMPHPNVVSWNSMIAGFADNGSQ-RAL-EFVSMMHKRCIKLDDFTFPCALKISALHGL 249
Query: 244 VF---------------SACSNFARIL---------------------FNEIDSPDLASW 267
+F S+C + ++ FN S +LA W
Sbjct: 250 LFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLALW 309
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
N++++G ++ A++L SE+ L D T L CI L+ G+Q+H I+
Sbjct: 310 NSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGLIVT 369
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
G++ + V + ++ +YAK + + +AL +F L + D ++W+ +I C Q F
Sbjct: 370 CGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRK-DIIAWSGLIMGCAQIGLNWLAFS 428
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
+F ML + DH + ++ C+ +ASL Q+H K+G + F + L+D+Y
Sbjct: 429 MFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYS 488
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
KCG + A LF + D+VSW+ +I+G Q G EA++ F M G++PN +T +G
Sbjct: 489 KCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITFLG 548
Query: 508 VLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
VL+AC + GLVEE ++ M++ YG+ P EH C+VDLLA G EAE I M +
Sbjct: 549 VLSACRYAGLVEEARSIFNSMKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIANMPFE 608
Query: 568 ADIVVWKSLLAS 579
+ W++LL +
Sbjct: 609 PNQTTWRTLLGA 620
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 138/557 (24%), Positives = 222/557 (39%), Gaps = 123/557 (22%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA-------- 89
Y+ ++ AC + L LG+ + + I K Q D +L N +++M+ KCGSL DA
Sbjct: 106 YSAVLKACGFVGDLGLGKLIQERIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNIS 165
Query: 90 ----------RMGFDK-------------MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
G+ K MP NVVSW +MIAG + N + A++
Sbjct: 166 RATTTTWNIIVSGYSKAGLMVEAEKLFHCMPHPNVVSWNSMIAGFADNGSQR-ALEFVSM 224
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD- 185
M + + FTF +K + G + +G+Q+H++V K + S +ALI MY+ +
Sbjct: 225 MHKRCIKLDDFTFPCALKISALHGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCND 284
Query: 186 -----RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
++ D + F+ ++ W SM++ + + AL +E+ GA + +
Sbjct: 285 LIEAVKLFDQHSSFNASISDNLALWNSMLSGYVINNCDQAALNLLSEIHCSGALL-DSYT 343
Query: 241 FGSVFSACSNF----------------------------------------ARILFNEID 260
FG C N A +F+ +
Sbjct: 344 FGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLP 403
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D+ +W+ LI G A A S+F M + D + ++L C +L G Q
Sbjct: 404 RKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQ 463
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
VH+ +K G++ ++L MY+KC + +AL +F + D VSW II C Q+
Sbjct: 464 VHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFC-CEQEKDIVSWTGIIVGCGQNG 522
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
+A E R F M+ S I P+ ITF V+ AC +E
Sbjct: 523 KAAEAVRFFHEMIRSGITPNEITFLGVLSACRYAGLVE---------------------- 560
Query: 441 GLMDIYIKCGSLGSARKLFNFMEN-----PDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
AR +FN M++ P + + ++ A G +EA KL M
Sbjct: 561 -------------EARSIFNSMKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIANMP- 606
Query: 496 LGVSPNLVTLVGVLTAC 512
PN T +L AC
Sbjct: 607 --FEPNQTTWRTLLGAC 621
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/512 (22%), Positives = 214/512 (41%), Gaps = 83/512 (16%)
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
++ C+ + + G +HA++ K + + N LI+MY +F + DA VF + +++
Sbjct: 10 LRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNI 69
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------- 249
+W +M++AF+ G EA+ +N+M + PN +++ +V AC
Sbjct: 70 VTWTTMVSAFTDGGRPYEAIRLYNDM--PKSETPNGYMYSAVLKACGFVGDLGLGKLIQE 127
Query: 250 ---------------------------NFARILFNEIDSPDLASWNALIAGVAS------ 276
N A +F+ I +WN +++G +
Sbjct: 128 RIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVE 187
Query: 277 ---------HSN---------------ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
H N + A+ S M R + D T L
Sbjct: 188 AEKLFHCMPHPNVVSWNSMIAGFADNGSQRALEFVSMMHKRCIKLDDFTFPCALKISALH 247
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS---- 368
L+ G QVHSY+ K+G++S+ +A++ MY+ C+ L A+ +F + S+S
Sbjct: 248 GLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLA 307
Query: 369 -WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
WNS+++ + +N + L S + S D TF + C + S + QLH I
Sbjct: 308 LWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGLI 367
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
G D V + L+D+Y K ++ A +F+ + D+++WS LI+G AQ G A
Sbjct: 368 VTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLAF 427
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
+F M L + + +L CS++ + G ++ + G + ++D+
Sbjct: 428 SMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKS-GYEMEGFTITSLLDM 486
Query: 548 LARAGCVHEAEDFINQMAC--DADIVVWKSLL 577
++ G E ED + C + DIV W ++
Sbjct: 487 YSKCG---EIEDALTLFCCEQEKDIVSWTGII 515
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 143/286 (50%), Gaps = 14/286 (4%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ G + C +L S ++G ++H I+ + D V+ + ++++Y K +++DA F ++
Sbjct: 343 TFGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRL 402
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P++++++W+ +I GC+Q A ++ ML+ F +I+K CS L S+ G+
Sbjct: 403 PRKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGK 462
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+HA +KS + +L+ MY+K I DA +F KD+ SW +I + G
Sbjct: 463 QVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNG 522
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFNEIDS-----PDLAS 266
EA+ F+EM+ G PNE F V SAC AR +FN + S P L
Sbjct: 523 KAAEAVRFFHEMIRSG-ITPNEITFLGVLSACRYAGLVEEARSIFNSMKSVYGLEPHLEH 581
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
+ ++ +AS EA L + M P+ T +LL AC R
Sbjct: 582 YCCMVDLLASVGLPEEAEKLIANM---PFEPNQTTWRTLLGACGTR 624
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 158/397 (39%), Gaps = 58/397 (14%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ------RNVVSW 104
L +G++VH ++ + + +++MY C L +A FD+ N+ W
Sbjct: 250 LFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLALW 309
Query: 105 TAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK 164
+M++G N + A+ L ++ SG + +TFG +K C L S +G QLH ++
Sbjct: 310 NSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGLIVT 369
Query: 165 SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCH 224
+ + + L+ +Y K I DA +F + RKD+ +W +I +++G A
Sbjct: 370 CGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLAFSM 429
Query: 225 FNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------------------ 254
F ML + + F+ ++ CSN A +
Sbjct: 430 FKGMLEL-VNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYS 488
Query: 255 ----------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
LF D+ SW +I G + A EA+ F EM + P+ +T
Sbjct: 489 KCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITFLG 548
Query: 305 LLCACIGRLTLYQGM--QVHSYIIKM----GFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+L AC Y G+ + S M G + ++ ++ + A + A +
Sbjct: 549 VLSAC-----RYAGLVEEARSIFNSMKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIA 603
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
+ + +W +++ AC N + + R+ +L +
Sbjct: 604 NMPFEPNQTTWRTLLGACGTRNDTKLINRVADGLLEA 640
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 151/483 (31%), Positives = 253/483 (52%), Gaps = 46/483 (9%)
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
T S++ CS ++ G LHA V+K+ S + N ++ MY K AR VF +
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--- 254
K++ SW +MI+ + + G A+ +++M PNE++F SV SAC++ + +
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF----LVPNEYVFASVISACASLSAVTLG 120
Query: 255 -------------------------------------LFNEIDSPDLASWNALIAGVASH 277
+F P+ S+NALI G +
Sbjct: 121 QKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVEN 180
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
+ F MR + L+PD +L C L +G ++H +K+ DS +
Sbjct: 181 QQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIG 240
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA-SQ 396
N I+TMY++ +++ A F+ L + D +SWN++IAAC + + R+F M +
Sbjct: 241 NVIITMYSELNLIQEAEKAFR-LIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETN 299
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
++PD TF + ACA +AS+ Q+H ++ +T L D+ V N L+++Y KCG +G A
Sbjct: 300 VRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAY 359
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
+F+ M + ++VSW+++I G+ G G+ A++LF +M + G+ P+ VT +G+LTAC+H G
Sbjct: 360 DIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAG 419
Query: 517 LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
LV++G + ME YGI P EH SC++D+L RAG ++EAE+++ + D VV SL
Sbjct: 420 LVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSL 479
Query: 577 LAS 579
L++
Sbjct: 480 LSA 482
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/510 (29%), Positives = 246/510 (48%), Gaps = 51/510 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T + L+ CS ++L+ G +H +L + Q DV + NH+LNMY KCG AR FD+M
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++N+VSW+AMI+G Q + AI LY QM ++P ++ F S+I AC+ L +V LG+
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H+ +K + S N+LI+MY K ++ DA +VF+ + S+ ++I F +
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVE-N 180
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+LE F +++ P+ F F V C+
Sbjct: 181 QQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIG 240
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDREL 295
A F I+ D+ SWN LIA + + + + +F M + +
Sbjct: 241 NVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNV 300
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD T S L AC G ++ G Q+H+++++ ++ V NA++ MYAKC + A
Sbjct: 301 RPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYD 360
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F ++ + + VSWN+IIA H E LF +M AS I+PD +TF ++ AC
Sbjct: 361 IFSKMVHH-NLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAG 419
Query: 416 SLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSAR---KLFNFMENPDV-VSW 470
++ + +T G+A D+ + L+D+ + G L A + F F +P V VS
Sbjct: 420 LVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSL 479
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
S + G+ K +++ + SP
Sbjct: 480 LSASRLHGDVVIGERLAKWLLKLQPVTTSP 509
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 83/152 (54%), Gaps = 1/152 (0%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
+ L + TN+R T+ ++AC+ L S+ G+++H H++ ++ D+ + N +
Sbjct: 286 KGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNAL 345
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
+NMY KCG + A F KM N+VSW +IAG + A++L+ QM SG+ P
Sbjct: 346 VNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDS 405
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG 168
TF ++ AC+ G V G QL+ + ++ +G
Sbjct: 406 VTFIGLLTACNHAGLVDKG-QLYFNSMEETYG 436
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 167/549 (30%), Positives = 261/549 (47%), Gaps = 108/549 (19%)
Query: 139 FGSIIKACSGLG-SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
F ++ +C L S R +HA VIKS + + QN LI Y K + D R +F +
Sbjct: 22 FAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKM 81
Query: 198 ARKDVTSWGSMIAAFSKLGYELEA-----------LCHFNEM------------------ 228
+++V +W S++ +KLG+ EA C +N M
Sbjct: 82 PQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFA 141
Query: 229 -LHHGAYQPNEFIFGSVFSACS-------------------------------------- 249
+H + NE+ F S SACS
Sbjct: 142 MMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCG 201
Query: 250 --NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC 307
N A+ +F+E+ ++ SWN+LI + A EA+ +F M + + PD +T+ S++
Sbjct: 202 NVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVIS 261
Query: 308 ACIGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVFKELG----- 361
AC + G +VH+ ++KM +++ + NA + MYAKCS + A +F +
Sbjct: 262 ACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVI 321
Query: 362 -------------------------KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
+ VSWN++IA Q+ + EE LF +
Sbjct: 322 AETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRES 381
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF------DVFVMNGLMDIYIKCG 450
+ P H TF +++ ACA +A L + Q H ++ K G F D+FV N L+D+Y+KCG
Sbjct: 382 VCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCG 441
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ +F M D VSW+++I+G+AQ G G+EAL+LF M G P+ +T++GVL+
Sbjct: 442 CVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLS 501
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
AC H G VEEG H + M ++G+ P R+H +C+VDLL RAG + EA+ I +M D
Sbjct: 502 ACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDS 561
Query: 571 VVWKSLLAS 579
V+W SLLA+
Sbjct: 562 VIWGSLLAA 570
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 149/482 (30%), Positives = 244/482 (50%), Gaps = 44/482 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQ-NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
N VS + + EAL Y F+ + + T+A +SACS L + G ++H I
Sbjct: 121 NSMVSGFAQHDRCEEAL--YYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLI 178
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
S C DV + + +++MY KCG++ DA+ FD+M RNVVSW ++I QN +A+
Sbjct: 179 AKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEAL 238
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH-GSHLIAQNALIAM 180
K++ ML+S V P + T S+I AC+ L ++ +G+++HA V+K + + +I NA + M
Sbjct: 239 KVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDM 298
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K RI +AR +F + ++V + SM++ ++
Sbjct: 299 YAKCSRIKEARFIFDSMPIRNVIAETSMVSGYA--------------------------- 331
Query: 241 FGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
+A + AR++F ++ ++ SWNALIAG + EA+SLF ++ + P
Sbjct: 332 ----MAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHY 387
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGF------DSNVPVCNAILTMYAKCSVLCNAL 354
T ++L AC L+ GMQ H +++K GF + ++ V N+++ MY KC +
Sbjct: 388 TFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGY 447
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
LVF+++ + D VSWN++I Q+ E LF ML S KPDHIT V+ AC
Sbjct: 448 LVFRKMMER-DCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHA 506
Query: 415 ASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSS 472
+E +T+ G+A ++D+ + G L A+ + M PD V W S
Sbjct: 507 GFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGS 566
Query: 473 LI 474
L+
Sbjct: 567 LL 568
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 98/183 (53%), Gaps = 8/183 (4%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHIL------LSKCQPDVVLQNHILNMYGKCGSLEDAR 90
T+A ++ AC+ L L LG + H H+L S + D+ + N +++MY KCG +E+
Sbjct: 388 TFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGY 447
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ F KM +R+ VSW AMI G +QN N+A++L+ +ML SG P T ++ AC G
Sbjct: 448 LVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAG 507
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQ-NALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSM 208
V GR + + + + L ++ + + + +A+++ + + D WGS+
Sbjct: 508 FVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSL 567
Query: 209 IAA 211
+AA
Sbjct: 568 LAA 570
>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 666
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 179/582 (30%), Positives = 288/582 (49%), Gaps = 45/582 (7%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+ S+ +S +++H IL L + + Y +C A FDK+ Q
Sbjct: 17 LLGKFSASQSHSETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPC 76
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGSVCLGRQLH 159
+ SW AM+ Q + DA+ L+++ML SG +P +FT+ +IKAC L + +G +H
Sbjct: 77 LFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIH 136
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
K + S QN L+AMY A+ VF + + V SW +MI + +
Sbjct: 137 GQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAE 196
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------------ 249
+A+ + M+ G +P+ SV AC
Sbjct: 197 DAVNVYGRMMDVGV-EPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNAL 255
Query: 250 ----------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
A +L +D D+ +W LI G + +A A+ L M+ + P+
Sbjct: 256 VDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNS 315
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+++ SLL AC + L G +H++ I+ +S V V A++ MYAKC+ + VF
Sbjct: 316 VSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMG 375
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
K + WN++++ +Q+ A E LF +ML ++PDH TFN ++ A A +A L+
Sbjct: 376 TSKK-RTAPWNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQ 434
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF--MENPDVVSWSSLILGY 477
+HCY+ ++G + + V + L+DIY KCGSLG A ++FN +++ D++ WS++I Y
Sbjct: 435 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAY 494
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
+ G G A+KLF +M GV PN VT VL ACSH GLV EG L+ M ++ II
Sbjct: 495 GKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISH 554
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H +C++DLL RAG +++A + I M + VW +LL +
Sbjct: 555 VDHYTCMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGALLGA 596
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 138/481 (28%), Positives = 223/481 (46%), Gaps = 44/481 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY +I AC L + +G +H D +QN +L MY G E A++ FD M
Sbjct: 115 TYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPM 174
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R V+SW MI G +N DA+ +Y +M+ GV P T S++ AC L +V LGR
Sbjct: 175 QERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGR 234
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H V + +++ +NAL+ MY K ++ +A + G+ KDV +W ++I + G
Sbjct: 235 EVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGYILNG 294
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSA----------------------------- 247
AL M G +PN S+ SA
Sbjct: 295 DARSALMLCGMMQCEGV-KPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVE 353
Query: 248 -----------CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
C N + +F A WNAL++G + A EA+ LF +M +++
Sbjct: 354 TALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSGFIQNRLAREAIELFKQMLVKDVQ 413
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD T +SLL A L Q M +H Y+I+ GF + V + ++ +Y+KC L A +
Sbjct: 414 PDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQI 473
Query: 357 FKELG-KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
F + K+ D + W++IIAA +H + +LF++M+ S +KP+H+TF V+ AC+
Sbjct: 474 FNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAG 533
Query: 416 SLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSL 473
+ L ++ K + V ++D+ + G L A L M P+ W +L
Sbjct: 534 LVNEGFSLFNFMLKQHQIISHVDHYTCMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGAL 593
Query: 474 I 474
+
Sbjct: 594 L 594
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 198/441 (44%), Gaps = 48/441 (10%)
Query: 30 NIRIRP--STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
++ + P +T ++ AC L++++LGR+VH + ++V++N +++MY KCG ++
Sbjct: 207 DVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMK 266
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
+A + M ++VV+WT +I G N A+ L M GV P + S++ AC
Sbjct: 267 EAWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACG 326
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
L + G+ LHA I+ + S +I + ALI MY K + + VF G ++K W +
Sbjct: 327 SLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNA 386
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS------------------------ 243
+++ F + EA+ F +ML QP+ F S
Sbjct: 387 LLSGFIQNRLAREAIELFKQMLVKDV-QPDHATFNSLLPAYAILADLQQAMNIHCYLIRS 445
Query: 244 --------------VFSACSN--FARILFN--EIDSPDLASWNALIAGVASHSNANEAMS 285
++S C + +A +FN + D+ W+A+IA H + A+
Sbjct: 446 GFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVK 505
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMY 344
LF++M + P+ +T S+L AC + +G + ++++K S+V ++ +
Sbjct: 506 LFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHYTCMIDLL 565
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE--ELFRLFSRMLASQIKPDHI 402
+ L +A + + + + W +++ AC+ H E E+ ++ L + +++
Sbjct: 566 GRAGRLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGEVAARWTFKLEPENTGNYV 625
Query: 403 TFNDVMGACAKMASLEMVTQL 423
+ A + E V +
Sbjct: 626 LLAKLYAAVGRWGDAERVRDM 646
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 151/483 (31%), Positives = 253/483 (52%), Gaps = 46/483 (9%)
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
T S++ CS ++ G LHA V+K+ S + N ++ MY K AR VF +
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--- 254
K++ SW +MI+ + + G A+ +++M PNE++F SV SAC++ + +
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF----LVPNEYVFASVISACASLSAVTLG 120
Query: 255 -------------------------------------LFNEIDSPDLASWNALIAGVASH 277
+F P+ S+NALI G +
Sbjct: 121 QKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVEN 180
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
+ F MR + L+PD +L C L +G ++H +K+ DS +
Sbjct: 181 QQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIG 240
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA-SQ 396
N I+TMY++ +++ A F+ L + D +SWN++IAAC + + R+F M +
Sbjct: 241 NVIITMYSELNLIQEAEKAFR-LIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETN 299
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
++PD TF + ACA +AS+ Q+H ++ +T L D+ V N L+++Y KCG +G A
Sbjct: 300 VRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAY 359
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
+F+ M + ++VSW+++I G+ G G+ A++LF +M + G+ P+ VT +G+LTAC+H G
Sbjct: 360 DIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAG 419
Query: 517 LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
LV++G + ME YGI P EH SC++D+L RAG ++EAE+++ + D VV SL
Sbjct: 420 LVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSL 479
Query: 577 LAS 579
L++
Sbjct: 480 LSA 482
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/510 (29%), Positives = 246/510 (48%), Gaps = 51/510 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T + L+ CS ++L+ G +H +L + Q DV + NH+LNMY KCG AR FD+M
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++N+VSW+AMI+G Q + AI LY QM ++P ++ F S+I AC+ L +V LG+
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H+ +K + S N+LI+MY K ++ DA +VF+ + S+ ++I F +
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVE-N 180
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+LE F +++ P+ F F V C+
Sbjct: 181 QQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIG 240
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDREL 295
A F I+ D+ SWN LIA + + + + +F M + +
Sbjct: 241 NVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNV 300
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD T S L AC G ++ G Q+H+++++ ++ V NA++ MYAKC + A
Sbjct: 301 RPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYD 360
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F ++ + + VSWN+IIA H E LF +M AS I+PD +TF ++ AC
Sbjct: 361 IFSKMVHH-NLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAG 419
Query: 416 SLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSAR---KLFNFMENPDV-VSW 470
++ + +T G+A D+ + L+D+ + G L A + F F +P V VS
Sbjct: 420 LVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSL 479
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
S + G+ K +++ + SP
Sbjct: 480 LSASRLHGDVVIGERLAKWLLKLQPVTTSP 509
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 83/152 (54%), Gaps = 1/152 (0%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
+ L + TN+R T+ ++AC+ L S+ G+++H H++ ++ D+ + N +
Sbjct: 286 KGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNAL 345
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
+NMY KCG + A F KM N+VSW +IAG + A++L+ QM SG+ P
Sbjct: 346 VNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDS 405
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG 168
TF ++ AC+ G V G QL+ + ++ +G
Sbjct: 406 VTFIGLLTACNHAGLVDKG-QLYFNSMEETYG 436
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 166/534 (31%), Positives = 269/534 (50%), Gaps = 48/534 (8%)
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
+EDA FD+M + + W MI G + +A++ Y +M+ +GV FT+ +IK+
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
+G+ S+ G+++HA VIK S + N+LI++Y K DA VF + +D+ SW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------- 249
SMI+ + LG +L F EML G ++P+ F S ACS
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCG-FKPDRFSTMSALGACSHVYSPKMGKEIHCHAV 258
Query: 250 -------------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
++A +FN + ++ +WN +I A + +A
Sbjct: 259 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 285 SLFSEMRDRE-LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
F +M ++ L PD +T +LL A + +G +H Y ++ GF ++ + A++ M
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLLPAS----AILEGRTIHGYAMRRGFLPHMVLETALIDM 374
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
Y +C L +A ++F + + + +SWNSIIAA +Q+ + LF + S + PD T
Sbjct: 375 YGECGQLKSAEVIFDRMAEK-NVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTT 433
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
++ A A+ SL ++H YI K+ + ++N L+ +Y CG L ARK FN +
Sbjct: 434 IASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL 493
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
DVVSW+S+I+ YA G G ++ LF+ M + V+PN T +L ACS G+V+EG
Sbjct: 494 LKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE 553
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ M+ EYGI P EH C++DL+ R G A+ F+ +M +W SLL
Sbjct: 554 YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLL 607
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 232/477 (48%), Gaps = 40/477 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY +I + + + SL+ G+K+H ++ DV + N ++++Y K G DA F++M
Sbjct: 132 TYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM 191
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+R++VSW +MI+G ++ L+ +ML+ G P +F+ S + ACS + S +G+
Sbjct: 192 PERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251
Query: 157 QLHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
++H H ++S ++ +++ MY+K+ + A +F+G+ ++++ +W MI +++
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311
Query: 216 GYELEALCHFNEMLHHGAYQPN----------------------------------EFIF 241
G +A F +M QP+ E
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETAL 371
Query: 242 GSVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
++ C A ++F+ + ++ SWN++IA + A+ LF E+ D L+PD
Sbjct: 372 IDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDS 431
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
T+ S+L A L+L +G ++H+YI+K + SN + N+++ MYA C L +A F
Sbjct: 432 TTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNH 491
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-E 418
+ D VSWNSII A H LFS M+AS++ P+ TF ++ AC+ + E
Sbjct: 492 ILLK-DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDE 550
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
+ G+ + ++D+ + G+ +A++ M P W SL+
Sbjct: 551 GWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLL 607
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 14/252 (5%)
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N P L +A ++ +AL +F E+ K AD+ WN +I E + +SRM
Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNK-ADAFLWNVMIKGFTSCGLYIEAVQFYSRM 121
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
+ + +K D T+ V+ + A ++SLE ++H + K G DV+V N L+ +Y+K G
Sbjct: 122 VFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCA 181
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
A K+F M D+VSW+S+I GY G G +L LF M G P+ + + L AC
Sbjct: 182 WDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC 241
Query: 513 SHVGLVEEGLHLY------RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
SHV + G ++ RI + ++ + ++D+ ++ G V AE N M
Sbjct: 242 SHVYSPKMGKEIHCHAVRSRIETGDVMVMTS------ILDMYSKYGEVSYAERIFNGM-I 294
Query: 567 DADIVVWKSLLA 578
+IV W ++
Sbjct: 295 QRNIVAWNVMIG 306
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 78/133 (58%), Gaps = 1/133 (0%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T A ++ A + SL GR++H +I+ S+ + ++ N +++MY CG LEDAR F+
Sbjct: 432 TTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNH 491
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ ++VVSW ++I + + ++ L+ +M+ S V P + TF S++ ACS G V G
Sbjct: 492 ILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEG 551
Query: 156 RQLHAHVIKSEHG 168
+ + +K E+G
Sbjct: 552 WE-YFESMKREYG 563
>gi|116310930|emb|CAH67868.1| B0403H10-OSIGBa0105A11.20 [Oryza sativa Indica Group]
Length = 804
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 185/597 (30%), Positives = 303/597 (50%), Gaps = 58/597 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILL-SKCQPDV-VLQNHILNMYGKCGSLEDARMG-- 92
TY+ ++AC+ R L+LGR VH H+L ++ PD VL+N +LN+Y +AR+
Sbjct: 107 TYSAALTACARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVV 166
Query: 93 ---FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
FD MP+RNVVSW + + + +A++L+++ML+ G P +F +I A
Sbjct: 167 RRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAVA- 225
Query: 150 GSVCLGRQLHAHVIKS--EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
QL+ ++K E+ + L ++ I M+++F + AR VF A+K+ W +
Sbjct: 226 DDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNT 285
Query: 208 MIAAFSKLGYELEALCHFNEMLH-----------------------------------HG 232
MI + + G EA+ F+++L G
Sbjct: 286 MITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKG 345
Query: 233 AYQPNEFIFGS----VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
++ I G+ ++S C N A LF+ + D+ +WN ++ + E + L
Sbjct: 346 MHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLL 405
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
EM+ D +T+ ++L A L G Q H Y+I+ G + + + ++ MYAK
Sbjct: 406 VYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGE-GLESYLIDMYAK 464
Query: 347 CSVLCNALLVFKELGKNA--DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
+ A VF KNA D V+WN++IA Q Q E+ +F ML + ++P +T
Sbjct: 465 SGRVEMAQRVFDSF-KNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTL 523
Query: 405 NDVMGACAKMAS-LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
V+ AC + + Q+HC+ + L +VFV L+D+Y KCG + +A +F M
Sbjct: 524 ASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMT 583
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
V+++++I G Q G G +AL LF M+ G+ P+ VT + ++AC++ GLV+EGL
Sbjct: 584 GKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLA 643
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV-VWKSLLAS 579
LYR M++ +GI T +H CV DLLA+AG V EA +FI + + + V +W SLLAS
Sbjct: 644 LYRSMDS-FGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLAS 699
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 218/466 (46%), Gaps = 61/466 (13%)
Query: 107 MIAGCSQNYQENDAIKLYIQMLQSGVMP---GQFTFGSIIKACSGLGSVCLGRQLHAHVI 163
+IA + QE +A++L + + P +T+ + + AC+ + LGR +HAH++
Sbjct: 74 LIAYADRALQE-EALRLNALLNHAARPPVRSDHYTYSAALTACARSRRLRLGRSVHAHML 132
Query: 164 KSEHG--SHLIAQNALIAMYTKFDRILDA-----RNVFSGIARKDVTSWGSMIAAFSKLG 216
+ + +N+L+ +Y R +A R +F + +++V SW ++ + K G
Sbjct: 133 RRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTG 192
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSAC---------------------------- 248
EAL F ML G ++P F ++F A
Sbjct: 193 RPQEALELFVRMLEDG-FRPTPVSFVNIFPAAVADDPSWPFQLYGLLVKYGVEYINDLFV 251
Query: 249 --------SNF-----ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE-MRDRE 294
S F AR +F+ + WN +I G + +EA+ LFS+ + RE
Sbjct: 252 VSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSRE 311
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC--NAILTMYAKCSVLCN 352
+ D +T S L A + G Q+H Y+IK G +PV NA++ MY++C +
Sbjct: 312 VPLDVVTFLSALTAASQSQDVSLGQQLHGYLIK-GMHRTLPVILGNALVVMYSRCGNVQT 370
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A +F L + D V+WN+++ A +Q++ E L M S D +T V+ A +
Sbjct: 371 AFDLFDRLPEK-DIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASS 429
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP--DVVSW 470
L++ Q H Y+ + G+ + + + L+D+Y K G + A+++F+ +N D V+W
Sbjct: 430 NTGDLQIGKQAHGYLIRHGIEGE-GLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTW 488
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
+++I GY Q G ++A+ +F M G+ P VTL VL AC VG
Sbjct: 489 NAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVG 534
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 202/438 (46%), Gaps = 52/438 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + ++EA+ + + + + T+ ++A S + + LG+++H +++
Sbjct: 284 NTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLI 343
Query: 63 --LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ + P V+L N ++ MY +CG+++ A FD++P++++V+W M+ QN + +
Sbjct: 344 KGMHRTLP-VILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEG 402
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA-QNALIA 179
+ L +M +SG T +++ A S G + +G+Q H ++I+ HG ++ LI
Sbjct: 403 LLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIR--HGIEGEGLESYLID 460
Query: 180 MYTKFDRILDARNVFSGI--ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
MY K R+ A+ VF A++D +W +MIA +++ G +A+ F ML G +P
Sbjct: 461 MYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAG-LEPT 519
Query: 238 EFIFGSVFSACS-----------------------------------------NFARILF 256
SV AC A +F
Sbjct: 520 SVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVF 579
Query: 257 NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
+ ++ +I+G+ H +A++LF+ M+++ L PD +T S + AC +
Sbjct: 580 GGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVD 639
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS-WNSIIAA 375
+G+ ++ + G + + + AK + A + LG+ + V+ W S++A+
Sbjct: 640 EGLALYRSMDSFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLAS 699
Query: 376 CLQHNQAEELFRLFSRML 393
C + +EL +L ++ L
Sbjct: 700 CKAQGK-QELAKLVTKKL 716
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 15/235 (6%)
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRL---FSRMLASQIKPDHITFNDVMGAC 411
L+ + L + ++ N+++ A EE RL + ++ DH T++ + AC
Sbjct: 56 LLLEALPRPPPTLLCNALLIAYADRALQEEALRLNALLNHAARPPVRSDHYTYSAALTAC 115
Query: 412 AKMASLEMVTQLHCYITKTGLAF-DVFVM-NGLMDIYI-----KCGSLGSARKLFNFMEN 464
A+ L + +H ++ + + D V+ N L+++Y + + R+LF+ M
Sbjct: 116 ARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMPK 175
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
+VVSW++L Y + G EAL+LF RM G P V+ V + A L
Sbjct: 176 RNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAV-ADDPSWPFQL 234
Query: 525 YRIMENEYGI--IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
Y ++ +YG+ I S +D+ + G V A ++ A + VW +++
Sbjct: 235 YGLLV-KYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDR-AAKKNTEVWNTMI 287
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 177/594 (29%), Positives = 284/594 (47%), Gaps = 69/594 (11%)
Query: 41 LISACSSLRSLQLGRK------VHDHILLSKCQPDVVLQNHILN-MYGKCGSLEDARMGF 93
L + CS L QL + VHD +++K LN +Y + S+ A F
Sbjct: 146 LETCCSKLSISQLHSQCLKAGLVHDSFIVTK-----------LNVLYARYASIHHAHKLF 194
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM-----LQSGVMPGQFTFGSIIKACSG 148
+ P R V W A++ + + + L+ QM + P ++ +K+C+G
Sbjct: 195 QETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAG 254
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
L + LG+ +H + K + +ALI +YTK ++ DA VF + DV W S+
Sbjct: 255 LRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSI 314
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC---SNF-------------- 251
I+ + + G AL F+ M+ P+ SV SAC SNF
Sbjct: 315 ISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKG 374
Query: 252 -----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
A LF E+ D+ SW+ ++A A + + + LF+
Sbjct: 375 LDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFN 434
Query: 289 EMRDRELLPDGLTVHSLL--CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
EM D+ + P+ +TV S+L CACI L +GM++H + GF+ V A++ MY K
Sbjct: 435 EMLDKRIKPNWVTVVSVLRACACISNLE--EGMKIHELAVNYGFEMETTVSTALMDMYMK 492
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
C A+ +F + K D ++W + + + E +F ML+S +PD I
Sbjct: 493 CFSPEKAVDLFNRMPKK-DVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVK 551
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
++ +++ L+ LH ++ K G + F+ L+++Y KC S+ A K+F M D
Sbjct: 552 ILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKD 611
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNLVTLVGVLTACSHVGLVEEGLHLY 525
VV+WSS+I Y G G+EALKLF +M + PN VT + +L+ACSH GL++EG++++
Sbjct: 612 VVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMF 671
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
IM N+Y + P EH + +VDLL R G + A D IN M A +W +LL +
Sbjct: 672 DIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGA 725
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 174/386 (45%), Gaps = 41/386 (10%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P T + SAC+ L + +LGR VH + + L N +L++YGK GS+++A F
Sbjct: 344 PVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFR 403
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+M ++++SW+ M+A + N E D + L+ +ML + P T S+++AC+ + ++
Sbjct: 404 EMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEE 463
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G ++H + AL+ MY K A ++F+ + +KDV +W + + ++
Sbjct: 464 GMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYAD 523
Query: 215 LGYELEALCHFNEMLHHG----------------------------------AYQPNEFI 240
G E++ F ML G ++ N+FI
Sbjct: 524 NGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFI 583
Query: 241 FGS---VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR-E 294
S V++ CS+ A +F + D+ +W+++IA H EA+ LF +M + +
Sbjct: 584 GASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSD 643
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAILTMYAKCSVLCNA 353
P+ +T S+L AC + +G+ + ++ K N ++ + + L A
Sbjct: 644 TKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMA 703
Query: 354 LLVFKELGKNADSVSWNSIIAACLQH 379
L V + A W +++ AC H
Sbjct: 704 LDVINNMPMQAGPDIWGALLGACRIH 729
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 128/240 (53%), Gaps = 12/240 (5%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
+L+NE L + RI+P+ T ++ AC+ + +L+ G K+H+ + + +
Sbjct: 431 DLFNEML----------DKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMET 480
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ +++MY KC S E A F++MP+++V++W + +G + N ++++ ++ ML S
Sbjct: 481 TVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSS 540
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G P I+ S LG + LHA VIK+ ++ +LI +Y K I DA
Sbjct: 541 GTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDA 600
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
VF G+ KDV +W S+IAA+ G EAL F +M +H +PN F S+ SACS+
Sbjct: 601 NKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSH 660
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 147/281 (52%), Gaps = 12/281 (4%)
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
LL C +L++ Q+HS +K G + + + +YA+ + + +A +F+E
Sbjct: 144 KLLETCCSKLSI---SQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHR 200
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRM-----LASQIKPDHITFNDVMGACAKMASLE 418
+ WN+++ + + E LF +M ++ + +PD+ + + + +CA + L
Sbjct: 201 TVYL-WNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLL 259
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
+ +H ++ K + D+FV + L+D+Y KCG + A K+F PDVV W+S+I GY
Sbjct: 260 LGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYE 319
Query: 479 QFGCGDEALKLFTRM-RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
Q G + AL F+RM S VSP+ VTLV V +AC+ + + G ++ ++ + G+
Sbjct: 320 QSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRK-GLDNK 378
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++ L + G + A + +M+ D DI+ W +++A
Sbjct: 379 LCLANSLLHLYGKTGSIKNASNLFREMS-DKDIISWSTMVA 418
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 175/618 (28%), Positives = 303/618 (49%), Gaps = 44/618 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +SS + L N+AL Y F + ST+ L+ AC +L++ + + D +
Sbjct: 107 NSIISSFVRNGLLNQALAFY-FKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVS 165
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + + ++ Y + G ++ FD++ Q++ V W M+ G ++ + IK
Sbjct: 166 SLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIK 225
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ M + P TF ++ C+ + LG QLH V+ S +N+L++MY+
Sbjct: 226 GFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYS 285
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K R DA +F ++R D +W MI+ + + G E+L F EM+ G P+ F
Sbjct: 286 KCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL-PDAITFS 344
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
S+ + S F A+ +F++ +S
Sbjct: 345 SLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSV 404
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ + A+I+G + +++ +F + ++ P+ +T+ S+L L L G ++H
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELH 464
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+IIK GFD+ + A++ MYAKC + A +F+ L K D VSWNS+I C Q +
Sbjct: 465 GFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKR-DIVSWNSMITRCAQSDNP 523
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
+F +M S I D ++ + + ACA + S +H ++ K LA DV+ + L
Sbjct: 524 SAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTL 583
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM-RSLGVSPN 501
+D+Y KCG+L +A +F M+ ++VSW+S+I G ++L LF M G+ P+
Sbjct: 584 IDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPD 643
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
+T + ++++C HVG V+EG+ +R M +YGI P +EH +CVVDL RAG + EA + +
Sbjct: 644 QITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETV 703
Query: 562 NQMACDADIVVWKSLLAS 579
M D VW +LL +
Sbjct: 704 KSMPFPPDAGVWGTLLGA 721
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 139/587 (23%), Positives = 261/587 (44%), Gaps = 46/587 (7%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P + L+ ACS+ L+ G++VH ++++ D IL MY CGS D F
Sbjct: 35 PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFY 94
Query: 95 KMPQR--NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
++ R ++ W ++I+ +N N A+ Y +ML GV P TF ++KAC L +
Sbjct: 95 RLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF 154
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
L V + ++LI Y ++ +I +F + +KD W M+ +
Sbjct: 155 KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY 214
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFG------------------------------ 242
+K G L+++ ++ PN F
Sbjct: 215 AKCG-ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFE 273
Query: 243 --------SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
S++S C F A LF + D +WN +I+G E+++ F EM
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMIS 333
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+LPD +T SLL + L Q+H YI++ ++ + +A++ Y KC +
Sbjct: 334 SGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSM 393
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A +F + + D V + ++I+ L + + +F ++ +I P+ IT ++
Sbjct: 394 AQNIFSQCN-SVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIG 452
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+ +L++ +LH +I K G + ++D+Y KCG + A ++F + D+VSW+S
Sbjct: 453 ILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNS 512
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
+I AQ A+ +F +M G+ + V++ L+AC+++ G ++ M ++
Sbjct: 513 MITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI-KH 571
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ S ++D+ A+ G + A + M + +IV W S++A+
Sbjct: 572 SLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAA 617
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 185/423 (43%), Gaps = 44/423 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + L E+L + + ++ + T++ L+ + S +L+ +++H +I+
Sbjct: 309 NCMISGYVQSGLMEESLTFF-YEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIM 367
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
D+ L + +++ Y KC + A+ F + +VV +TAMI+G N D+++
Sbjct: 368 RHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLE 427
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ +++ + P + T SI+ L ++ LGR+LH +IK + A+I MY
Sbjct: 428 MFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYA 487
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG---------- 232
K R+ A +F ++++D+ SW SMI ++ A+ F +M G
Sbjct: 488 KCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISA 547
Query: 233 -----AYQPNEFIFGS-----------------------VFSACSNF--ARILFNEIDSP 262
A P+E FG +++ C N A +F +
Sbjct: 548 ALSACANLPSE-SFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK 606
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRE-LLPDGLTVHSLLCACIGRLTLYQGMQ- 320
++ SWN++IA +H +++ LF EM ++ + PD +T ++ +C + +G++
Sbjct: 607 NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRF 666
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
S G ++ ++ + L A K + D+ W +++ AC H
Sbjct: 667 FRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHK 726
Query: 381 QAE 383
E
Sbjct: 727 NVE 729
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 140/287 (48%), Gaps = 5/287 (1%)
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
E +P L++ LL AC L QG QVH+++I + IL MYA C +
Sbjct: 31 EETIPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSD 88
Query: 353 ALLVFKELGKNADSV-SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+F L S+ WNSII++ +++ + + +ML + PD TF ++ AC
Sbjct: 89 CGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ + + + L ++ G+ + FV + L+ Y++ G + KLF+ + D V W+
Sbjct: 149 VALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWN 208
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
++ GYA+ G D +K F+ MR +SPN VT VL+ C+ L++ G+ L+ ++
Sbjct: 209 VMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS 268
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G+ + ++ + ++ G +A M+ AD V W +++
Sbjct: 269 -GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMIS 313
>gi|297813827|ref|XP_002874797.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320634|gb|EFH51056.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 748
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 171/570 (30%), Positives = 283/570 (49%), Gaps = 50/570 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L+ AC+SL+ L G +H +L++ D + + ++N+Y K G L AR FD+M
Sbjct: 48 TFPSLLKACTSLQLLSFGLSIHQKVLVNGFSSDSYISSSLVNLYAKFGLLGHARKVFDEM 107
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+VV WTAMI S+ +A L +M G+ P TF ++ SG+ + +
Sbjct: 108 RDRDVVHWTAMIGCYSRAGIFGEACSLVKEMRFQGIKPSPVTF---LEMLSGISEITQLQ 164
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
LHA + + N+++ +Y K DR+ DA+ +F + ++D+ SW +MI+ F+ +
Sbjct: 165 CLHAFALVYGFECDIAVMNSMLNLYCKCDRVGDAKELFDQMEQRDMVSWNTMISGFAFVA 224
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-----ARIL---------------- 255
E L M G +P++ FG+ S R+L
Sbjct: 225 NMSEILKLLYRMRDDG-LRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVGTGFDGDMHLR 283
Query: 256 -------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM--RDRE 294
I D+ W +I+G+ A +A+ +FSEM +
Sbjct: 284 TALITMYLKCGEEEASYRVLETIPDKDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSD 343
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
L + + CA +G L G VH Y+++ G+ + P N+ +TMYAKC L +L
Sbjct: 344 LSSEAIASVVASCAQLGSFDL--GASVHGYVLRQGYTLDTPALNSFITMYAKCGHLDKSL 401
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP-DHITFNDVMGACAK 413
++F+ + + D VSWN+II+ QH + LF M ++ D +T ++ AC+
Sbjct: 402 ILFERMNER-DLVSWNAIISGHAQHGDLCKALLLFEEMKFKTVQQVDSLTVVSLLQACSS 460
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+L + +HC + ++ + V L+D+Y KCG L +A++ FN + DVVSW +L
Sbjct: 461 AGALPVGRMIHCIVIRSFIRPCTLVDTALVDMYSKCGYLEAAQRCFNSITWKDVVSWGTL 520
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I GY G GD AL++++ G+ PN V + VL++CSH G+V++GL ++ M ++G
Sbjct: 521 IAGYGFHGKGDIALEIYSEFLHFGMKPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFG 580
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
+ P EH +CVVDLL RA V +A F +
Sbjct: 581 VEPNHEHLACVVDLLCRAKRVEDAFKFYKE 610
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 201/422 (47%), Gaps = 44/422 (10%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+ P T+ ++S S + LQ +H L+ + D+ + N +LN+Y KC + DA+
Sbjct: 143 IKPSPVTFLEMLSGISEITQLQC---LHAFALVYGFECDIAVMNSMLNLYCKCDRVGDAK 199
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+M QR++VSW MI+G + ++ +KL +M G+ P Q TFG+ + +
Sbjct: 200 ELFDQMEQRDMVSWNTMISGFAFVANMSEILKLLYRMRDDGLRPDQQTFGASLSVSGTMC 259
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ +GR LH ++ + + + ALI MY K + V I KDV W MI+
Sbjct: 260 DLEMGRMLHCQIVGTGFDGDMHLRTALITMYLKCGEEEASYRVLETIPDKDVVCWTVMIS 319
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFI------------------------------ 240
+LG +AL F+EMLH G+ +E I
Sbjct: 320 GLMRLGRAEKALIVFSEMLHSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRQGYTL 379
Query: 241 -------FGSVFSACSNFAR--ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
F ++++ C + + ILF ++ DL SWNA+I+G A H + +A+ LF EM+
Sbjct: 380 DTPALNSFITMYAKCGHLDKSLILFERMNERDLVSWNAIISGHAQHGDLCKALLLFEEMK 439
Query: 292 DRELLP-DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ + D LTV SLL AC L G +H +I+ V A++ MY+KC L
Sbjct: 440 FKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRSFIRPCTLVDTALVDMYSKCGYL 499
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
A F + D VSW ++IA H + + ++S L +KP+H+ F V+ +
Sbjct: 500 EAAQRCFNSITWK-DVVSWGTLIAGYGFHGKGDIALEIYSEFLHFGMKPNHVIFLAVLSS 558
Query: 411 CA 412
C+
Sbjct: 559 CS 560
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 164/329 (49%), Gaps = 10/329 (3%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR +F+E+ D+ W A+I + EA SL EMR + + P +T +L I
Sbjct: 100 ARKVFDEMRDRDVVHWTAMIGCYSRAGIFGEACSLVKEMRFQGIKPSPVTFLEMLSG-IS 158
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+T Q + H++ + GF+ ++ V N++L +Y KC + +A +F ++ + D VSWN+
Sbjct: 159 EITQLQCL--HAFALVYGFECDIAVMNSMLNLYCKCDRVGDAKELFDQM-EQRDMVSWNT 215
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+I+ E+ +L RM ++PD TF + M LEM LHC I TG
Sbjct: 216 MISGFAFVANMSEILKLLYRMRDDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVGTG 275
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
D+ + L+ +Y+KCG ++ ++ + + DVV W+ +I G + G ++AL +F+
Sbjct: 276 FDGDMHLRTALITMYLKCGEEEASYRVLETIPDKDVVCWTVMISGLMRLGRAEKALIVFS 335
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLA 549
M G + + V+ +C+ +G + G +H Y + + P + + + A
Sbjct: 336 EMLHSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRQGYTLDTPA---LNSFITMYA 392
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ G + ++ +M + D+V W ++++
Sbjct: 393 KCGHLDKSLILFERMN-ERDLVSWNAIIS 420
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 166/377 (44%), Gaps = 41/377 (10%)
Query: 24 FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
+ + +R T+ +S ++ L++GR +H I+ + D+ L+ ++ MY KC
Sbjct: 234 YRMRDDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVGTGFDGDMHLRTALITMYLKC 293
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G E + + +P ++VV WT MI+G + + A+ ++ +ML SG S++
Sbjct: 294 GEEEASYRVLETIPDKDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSSEAIASVV 353
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
+C+ LGS LG +H +V++ + A N+ I MY K + + +F + +D+
Sbjct: 354 ASCAQLGSFDLGASVHGYVLRQGYTLDTPALNSFITMYAKCGHLDKSLILFERMNERDLV 413
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------- 250
SW ++I+ ++ G +AL F EM Q + S+ ACS+
Sbjct: 414 SWNAIISGHAQHGDLCKALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCI 473
Query: 251 ---------------------------FARILFNEIDSPDLASWNALIAGVASHSNANEA 283
A+ FN I D+ SW LIAG H + A
Sbjct: 474 VIRSFIRPCTLVDTALVDMYSKCGYLEAAQRCFNSITWKDVVSWGTLIAGYGFHGKGDIA 533
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILT 342
+ ++SE + P+ + ++L +C + QG+++ S +++ G + N ++
Sbjct: 534 LEIYSEFLHFGMKPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVD 593
Query: 343 MYAKCSVLCNALLVFKE 359
+ + + +A +KE
Sbjct: 594 LLCRAKRVEDAFKFYKE 610
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 112/210 (53%), Gaps = 5/210 (2%)
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
+NS I H +++ FS MLA+++ PD TF ++ AC + L +H +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACTSLQLLSFGLSIHQKVL 73
Query: 429 KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
G + D ++ + L+++Y K G LG ARK+F+ M + DVV W+++I Y++ G EA
Sbjct: 74 VNGFSSDSYISSSLVNLYAKFGLLGHARKVFDEMRDRDVVHWTAMIGCYSRAGIFGEACS 133
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLL 548
L MR G+ P+ VT + +L+ S + + + LH + ++ YG + +++L
Sbjct: 134 LVKEMRFQGIKPSPVTFLEMLSGISEITQL-QCLHAFALV---YGFECDIAVMNSMLNLY 189
Query: 549 ARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ V +A++ +QM D+V W ++++
Sbjct: 190 CKCDRVGDAKELFDQME-QRDMVSWNTMIS 218
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 85/148 (57%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
+AL+ ++ + T ++ T L+ ACSS +L +GR +H ++ S +P ++ +
Sbjct: 430 KALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRSFIRPCTLVDTAL 489
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
++MY KCG LE A+ F+ + ++VVSW +IAG + + + A+++Y + L G+ P
Sbjct: 490 VDMYSKCGYLEAAQRCFNSITWKDVVSWGTLIAGYGFHGKGDIALEIYSEFLHFGMKPNH 549
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIK 164
F +++ +CS G V G ++ + +++
Sbjct: 550 VIFLAVLSSCSHNGMVQQGLKIFSSMVR 577
>gi|302799511|ref|XP_002981514.1| hypothetical protein SELMODRAFT_114884 [Selaginella moellendorffii]
gi|300150680|gb|EFJ17329.1| hypothetical protein SELMODRAFT_114884 [Selaginella moellendorffii]
Length = 641
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 187/601 (31%), Positives = 289/601 (48%), Gaps = 60/601 (9%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHI------LLSKCQPDVVLQNHILNMYGKCGSL 86
I Y L+ AC S RSL G +H I LL P +L H+ +MY +C SL
Sbjct: 7 IDAEGYCSLLRACGSSRSLDDGWAIHARIIAHSPGLLESSNP--LLAAHLFHMYLRCHSL 64
Query: 87 EDARMGFDKMP-QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
DA FD++P +R+VV WTA I + Q + A++ Y +ML G TF +++ A
Sbjct: 65 RDAIEVFDRIPGRRSVVLWTAAIGAYADAGQSSAALRFYRRMLLDGERADPITFITVLGA 124
Query: 146 CSGLGSVCLGRQLHAHVIKSEHG-SHLIA-QNALIAMYTKFDRILDARNVFSGIARKDVT 203
CS S LG ++ ++ S G SH NA+I+MY A +F G+ +D+
Sbjct: 125 CS---SARLGEAIYFQILASGFGRSHATKLGNAMISMYGTCGSAGSAAGIFVGMRERDLI 181
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------ 251
+W SMI AF+K G +A+ F M G ++ N SV ACS+
Sbjct: 182 TWTSMIHAFAKTGQNRDAILCFRSM-QQGGFRANAVTIVSVLGACSDVEDGRIIHRIASD 240
Query: 252 --------------------------ARILFNEIDSPD-LASWNALIAGVASHSNANEAM 284
AR +F EI + + SWN +++ EA+
Sbjct: 241 AGFLRENPLAANAVINMYGKSGNLAEARGVFREIYASQCVISWNTMMSACIQQERDEEAL 300
Query: 285 SLFSEM-RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF--DSNVPVCNAIL 341
+LF EM + PD ++ L AC L G +H+ +++G N + N +L
Sbjct: 301 ALFQEMISTGSIAPDNVSCVLALTACANLEALEAGEAIHAIALEIGLLVIENPVLINCVL 360
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+Y +C L A +F+E + VS N+II A QH + +E +F M + I+P
Sbjct: 361 HLYGRCGRLDRAAAIFREHRGDESLVSSNTIIGAFAQHGRWKEALAIFRGMQIAGIRPSK 420
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
+TF V+ CA +++L +H GL + V L+D+Y +CG L A+ +F+
Sbjct: 421 LTFAAVLDGCANLSALAEGRSIHALAAALGLEQEAVVATSLVDMYGRCGCLTIAQGIFDA 480
Query: 462 M--ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
M +N + ++WS+L YA G +A+K+ RM+ GV + V VL +CSH G++E
Sbjct: 481 MPAKNKNELAWSTLFGAYAHRGRLGQAMKILGRMQQEGVKIHPALFVSVLNSCSHAGMLE 540
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM-ACDADIVVWKSLLA 578
E L + M ++GI P EH CV+DLL R G + EAE F+ ++ ++++W S L
Sbjct: 541 ECLRQFASMRLDHGIQPKMEHFGCVIDLLGRLGALAEAERFMGRIPGGRPNLLIWMSFLG 600
Query: 579 S 579
S
Sbjct: 601 S 601
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 12/173 (6%)
Query: 2 SNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHD 59
SN + + + + EAL + Q IRPS T+A ++ C++L +L GR +H
Sbjct: 388 SNTIIGAFAQHGRWKEALAIFRGMQIAG---IRPSKLTFAAVLDGCANLSALAEGRSIHA 444
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP--QRNVVSWTAMIAGCSQNYQE 117
+ + V+ +++MYG+CG L A+ FD MP +N ++W+ + + +
Sbjct: 445 LAAALGLEQEAVVATSLVDMYGRCGCLTIAQGIFDAMPAKNKNELAWSTLFGAYAHRGRL 504
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACS--GLGSVCLGRQLHAHVIKSEHG 168
A+K+ +M Q GV F S++ +CS G+ CL RQ + ++ +HG
Sbjct: 505 GQAMKILGRMQQEGVKIHPALFVSVLNSCSHAGMLEECL-RQFAS--MRLDHG 554
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 192/690 (27%), Positives = 314/690 (45%), Gaps = 121/690 (17%)
Query: 5 YVSSLCKQNLYNEA---LVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
++SSLCK E+ L +F + +I P Y L+ C R+L G+++H I
Sbjct: 50 HISSLCKDGHLQESVHLLSEMEFE----DFQIGPEIYGELLQGCVYERALHTGQQIHARI 105
Query: 62 LLSK--CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIA-GCSQNYQEN 118
L + + ++ ++ Y KC E A F ++ RNV SW A++ C + E
Sbjct: 106 LKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSE- 164
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
DA+ +I+M ++GV P F +++KAC L + LG+ +H +V+K G+ + ++L+
Sbjct: 165 DALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLV 224
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
MY K + DAR VF + K+V +W SMI + + G EA+ F +M G +P
Sbjct: 225 DMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGI-EPTR 283
Query: 239 FIFGSVFSACSNF----------------------------------------ARILFNE 258
S SA +N A ++F+
Sbjct: 284 VTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSR 343
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ D+ +WN LI+ H +A+++ MR L D +T+ S+L A + G
Sbjct: 344 MLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLG 403
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCS-----------------VLCNALLV-FKEL 360
+ H Y I+ +S+V V N+I+ MYAKC VL N LL + ++
Sbjct: 404 KEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQV 463
Query: 361 GKNADS----------------VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
G + ++ +SWNS+I L++ Q E +FS+M + +P+ IT+
Sbjct: 464 GLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITW 523
Query: 405 N-----------------------------------DVMGACAKMASLEMVTQLHCYITK 429
V+ AC + SL +H +IT+
Sbjct: 524 TTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITR 583
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
V V L+D+Y KCGS+ A+K+F+ M + ++ ++++I YA G EAL L
Sbjct: 584 HEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALAL 643
Query: 490 FTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLA 549
F ++ G+ P+ +T +L+ACSH GLV EGL+L+ M +++ + P EH CVV LL+
Sbjct: 644 FKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLS 703
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLLAS 579
R G + EA I M D + SLL +
Sbjct: 704 RCGNLDEALRLILTMPFQPDAHILGSLLTA 733
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 180/369 (48%), Gaps = 21/369 (5%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
N+R T + ++SA + +++LG++ H + + + DVV+ N I++MY KC ++DA
Sbjct: 379 NLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDA 438
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD +R++V W ++A +Q +A+KL+ QM V P ++ S+I
Sbjct: 439 RKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRN 498
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK----FDRILDARNVFSGIARKDVTSW 205
G V + + + + +LI LI+ + ++ IL + + R + S
Sbjct: 499 GQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASI 558
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG--------SVFSACSNF--ARIL 255
S++ A + ++ +L + + HG +EF +++ C + A+ +
Sbjct: 559 TSVLLACT----DIPSLWYGRAI--HGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKV 612
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F+ + S +L +NA+I+ A H A EA++LF ++ + PD +T S+L AC +
Sbjct: 613 FHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLV 672
Query: 316 YQGMQVHSYII-KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
+G+ + + ++ K + + ++++ ++C L AL + + D+ S++
Sbjct: 673 NEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLT 732
Query: 375 ACLQHNQAE 383
AC +H++ E
Sbjct: 733 ACREHHEIE 741
>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
Length = 795
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 169/558 (30%), Positives = 270/558 (48%), Gaps = 50/558 (8%)
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
S +P ++ +H+ G +++A F + + MI G + DA+
Sbjct: 53 SGSRPKSLILSHV-----AAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAA 107
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
Y ML +G P +FTF ++K C+ G++ GR HA VIK G+ + N+L+A+Y K
Sbjct: 108 YRAMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAK 167
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM--------------- 228
+ DA VF G+ +D+ SW +M+ + G AL F EM
Sbjct: 168 LGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIA 227
Query: 229 ---------------------LHHGAYQPNEFIFGS----VFSACSN--FARILFNEIDS 261
+ HG Q + G+ ++ C N FA +F ++
Sbjct: 228 ALAACCLESALALGREIHGYAIRHGLEQ--DVKVGTSLVDMYCKCGNVFFAENVFAKMPL 285
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
+ +WN +I G A + +A F +MR + +T +LL AC + G V
Sbjct: 286 RTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSV 345
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H+Y+++ F +V + A+L MY K + ++ +F ++ + VSWN++IAA +
Sbjct: 346 HAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQI-TDKTLVSWNNMIAAYMYMEM 404
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+E LF +L + PD+ T V+ A + S+ Q+H YI K G +MN
Sbjct: 405 YQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNA 464
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
+M +Y +CG++ ++R++F+ M DV+SW+++I+GYA G G AL++F M+ G+ PN
Sbjct: 465 VMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPN 524
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
T V VLTACS GL EG + M+ EYG+IP EH C+ DLL RAG + E FI
Sbjct: 525 ESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFI 584
Query: 562 NQMACDADIVVWKSLLAS 579
M +W SLL +
Sbjct: 585 ENMPIAPTSRIWGSLLTA 602
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 128/519 (24%), Positives = 227/519 (43%), Gaps = 54/519 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + +L +AL AY + + R T+ ++ C+ +L GR H ++
Sbjct: 89 NVMIRGFADADLPLDALAAYR-AMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVI 147
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
DV N ++ +Y K G + DA FD MP R++VSW M+ G N A+
Sbjct: 148 KLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALA 207
Query: 123 LYIQMLQSGVMPGQFTFGSI--IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ +M + G + G I + AC ++ LGR++H + I+ + +L+ M
Sbjct: 208 CFREM-NDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDM 266
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K + A NVF+ + + V +W MI ++ ++A F +M G +Q
Sbjct: 267 YCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDG-FQVEVVT 325
Query: 241 FGSVFSACSN-----FAR-----------------------------------ILFNEID 260
++ +AC+ F R +F +I
Sbjct: 326 AINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQIT 385
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
L SWN +IA EA++LF E+ ++ L PD T+ +++ A + ++ Q Q
Sbjct: 386 DKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQ 445
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+HSYI+K+G+ + + NA++ MYA+C + + +F ++ D +SWN+II H
Sbjct: 446 MHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKM-PGKDVISWNTIIIGYAIHG 504
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA-SLEMVTQLHCYITKTGLAFDVFVM 439
Q + +F M S ++P+ TF V+ AC+ E + + + G+ +
Sbjct: 505 QGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHY 564
Query: 440 NGLMDIYIKCGSLGSARKLFNFMEN----PDVVSWSSLI 474
+ D+ + G L R++ F+EN P W SL+
Sbjct: 565 GCMTDLLGRAGEL---REVLRFIENMPIAPTSRIWGSLL 600
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 174/394 (44%), Gaps = 47/394 (11%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
++AC +L LGR++H + + + DV + +++MY KCG++ A F KMP R V
Sbjct: 229 LAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTV 288
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
V+W MI G + N + DA ++QM G T +++ AC+ S GR +HA+
Sbjct: 289 VTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAY 348
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
V++ H++ + AL+ MY K ++ + +F I K + SW +MIAA+ + EA
Sbjct: 349 VVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEA 408
Query: 222 LCHFNEMLHHGAYQ---------PNEFIFGSV---------------------------- 244
+ F E+L+ Y P + GS+
Sbjct: 409 IALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHM 468
Query: 245 FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
++ C N +R +F+++ D+ SWN +I G A H A+ +F EM+ + P+ T
Sbjct: 469 YARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTF 528
Query: 303 HSLLCAC-IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
S+L AC + L + +S + G + + + + L L + +
Sbjct: 529 VSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMP 588
Query: 362 KNADSVSWNSIIAACLQHNQ-------AEELFRL 388
S W S++ A N AE +F+L
Sbjct: 589 IAPTSRIWGSLLTASRNKNDIDIAEYAAERIFQL 622
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 189/626 (30%), Positives = 298/626 (47%), Gaps = 105/626 (16%)
Query: 47 SLRSLQLGR--------KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
+L+ QLG+ KV H+ + V N +++ + K G + DAR FD MPQ
Sbjct: 19 NLKITQLGKSGQIDEAIKVFQHM----THKNTVTHNSMISAFAKNGRISDARQLFDGMPQ 74
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
RN+VSW +MIA N + +A +L+ +M + +++ +I + G + R L
Sbjct: 75 RNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDL----YSWTLMITCYTRNGELAKARNL 130
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
+ + + + NA++A Y K + +AR +F + KD+ SW SM+ +++ G
Sbjct: 131 FNLL---PYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEM 187
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSV-----------FSACSN------------FARI- 254
L F EM N + G V F N FAR
Sbjct: 188 RLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFG 247
Query: 255 -------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH---- 303
LF+++ ++ +WNA+IA + + +EA+SLF EM ++ + ++
Sbjct: 248 KIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVR 307
Query: 304 --------SLLCACIGRLTLYQGMQVHSYIIKMGFDS-----------NVPVCNAILTMY 344
LL R Q + Y+ D +V N ++ Y
Sbjct: 308 MGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGY 367
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI------- 397
++C + AL +FK++ K D VSWN+++A+ Q Q + ++F M I
Sbjct: 368 SQCGRMDEALHLFKQMVKK-DIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLI 426
Query: 398 ------------------------KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
KPD TF + +CA +A+L++ QLH + K+G A
Sbjct: 427 SGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYA 486
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
D+FV N L+ +Y KCGS+ SA LF +++ DVVSW+SLI YA G G EALKLF +M
Sbjct: 487 TDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKM 546
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
GV+P+ VT VG+L+ACSHVGL+++GL L++ M Y I P EH +C+VDLL RAG
Sbjct: 547 EVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGR 606
Query: 554 VHEAEDFINQMACDADIVVWKSLLAS 579
+ EA + M +A+ +W +LL +
Sbjct: 607 LEEAFQLVRGMKINANAGIWGALLGA 632
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 161/349 (46%), Gaps = 50/349 (14%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
++N Y + G L++AR ++MP RNV + TAMI+G QN + +DA +++ Q+ V+
Sbjct: 301 VINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVV-- 358
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
+ ++I S G + L ++K + +++ N ++A Y + ++ A +F
Sbjct: 359 --CWNTMIAGYSQCGRMDEALHLFKQMVKKD----IVSWNTMVASYAQVGQMDAAIKIFE 412
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA--- 252
+ K++ SW S+I+ ++ G L+AL F M H G +P++ F S+C++ A
Sbjct: 413 EMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQ-KPDQSTFACGLSSCAHLAALQ 471
Query: 253 -------------------------------------RILFNEIDSPDLASWNALIAGVA 275
+LF +ID D+ SWN+LIA A
Sbjct: 472 VGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYA 531
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNV 334
+ N EA+ LF +M + PD +T +L AC + QG+++ +++ +
Sbjct: 532 LNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLA 591
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
++ + + L A + + + NA++ W +++ AC H E
Sbjct: 592 EHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLE 640
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 187/425 (44%), Gaps = 76/425 (17%)
Query: 166 EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHF 225
EHGS++ N I K +I +A VF + K+ + SMI+AF+K G +A F
Sbjct: 10 EHGSYVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLF 69
Query: 226 NEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASW------------------ 267
+ M N I + + AR LF+++ + DL SW
Sbjct: 70 DGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARN 129
Query: 268 --------------NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
NA++AG A + +EA LF M ++L ++ +S+L
Sbjct: 130 LFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDL----VSWNSMLTGYTRNG 185
Query: 314 TLYQGMQVHSYI---------------IKMG-------FDSNVPVCNAI--LTM---YAK 346
+ G+Q + +++G F +P N + +TM +A+
Sbjct: 186 EMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFAR 245
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
+ A +F ++ + V+WN++IAA +Q+ +E LF M + + I++
Sbjct: 246 FGKIAEARRLFDQMPIR-NVVAWNAMIAAYVQNCHVDEAISLFMEM----PEKNSISWTT 300
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
V+ +M L+ QL + +A +++G Y++ + AR++FN + D
Sbjct: 301 VINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISG----YVQNKRMDDARQIFNQISIRD 356
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
VV W+++I GY+Q G DEAL LF +M V ++V+ ++ + + VG ++ + ++
Sbjct: 357 VVCWNTMIAGYSQCGRMDEALHLFKQM----VKKDIVSWNTMVASYAQVGQMDAAIKIFE 412
Query: 527 IMENE 531
M+ +
Sbjct: 413 EMKEK 417
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 113/211 (53%), Gaps = 3/211 (1%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S L + Y +AL ++ + + ST+A +S+C+ L +LQ+G+++H ++
Sbjct: 423 NSLISGLTQNGSYLDALKSF-MLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVM 481
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S D+ + N ++ MY KCGS+ A + F + +VVSW ++IA + N +A+K
Sbjct: 482 KSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALK 541
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA-LIAMY 181
L+ +M GV P + TF I+ ACS +G + G +L ++++ + L A ++ +
Sbjct: 542 LFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLL 601
Query: 182 TKFDRILDARNVFSGIA-RKDVTSWGSMIAA 211
+ R+ +A + G+ + WG+++ A
Sbjct: 602 GRAGRLEEAFQLVRGMKINANAGIWGALLGA 632
>gi|242081959|ref|XP_002445748.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
gi|241942098|gb|EES15243.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
Length = 760
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 270/561 (48%), Gaps = 54/561 (9%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
+P + L N++L Y +C AR+ FD MP+R+VV+W +IAG + A+ +
Sbjct: 7 RPGLFLSNNLLAAYVRCADTRSARLLFDGMPRRDVVTWNTLIAGYATQGSARSALGAFRD 66
Query: 127 MLQSG-VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+ G V +FT+ +++ AC G G GR H + S N++I MY K
Sbjct: 67 ARRDGAVAVDRFTYAAVLAACGGAGDWRSGRAAHGLAVVSGLARTAFVSNSVIDMYAKCR 126
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I + R F +D SW +++A+ ++G+ E + +H + + F G +
Sbjct: 127 MIDEVRLAFDRAEERDEVSWNLLLSAYVRMGWP-EVAANVLVWMHRSGVELDAFALGGIL 185
Query: 246 SACS------NFARIL-----------------------------------FNEIDSPDL 264
ACS + R+L F I S ++
Sbjct: 186 KACSELEDSEDVRRMLHGCVIKVGLDLDVFVGSTMVDMYAKNGGLEEAIKVFGSIPSQNV 245
Query: 265 ASWNALIAGVASHSNAN------EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+N +IAG A N EA+ ++S M R + P T S+L C +
Sbjct: 246 VIYNTMIAGFARLGNDPCPEIRMEAVRIYSNMFRRRIRPSKFTFKSVLEVCNLTNAVRCW 305
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
Q+H+++I GF+ + + NA++ +Y+K ++ ++L F K + +W S+I A ++
Sbjct: 306 RQIHAHVILFGFEDDEFIGNALINLYSKARLVDDSLRCFHRTPKQ-EIFTWTSMITAFVR 364
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+ +++ LF + + ++PD T + VM ACA ++ Q+HCY K+G FD F
Sbjct: 365 NEHSDKALNLFKGLRYTGVEPDQFTMSSVMNACADLSMPIACEQIHCYAVKSG--FDRFT 422
Query: 439 M--NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
+ N +++Y G L +A+K F + + D SWS +IL YA G EAL LF +MR
Sbjct: 423 LCGNSQIEMYRCTGDLKAAKKTFERIPSLDTFSWSQMILSYAVHGHEREALLLFKKMRDC 482
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
V N + VL ACSH GL++EG Y M ++Y +P +H +C+VDLL G V +
Sbjct: 483 SVIINEFAFLAVLVACSHQGLIDEGFRHYESMVSDYSFVPDVKHIACMVDLLGHVGKVAD 542
Query: 557 AEDFINQMACDADIVVWKSLL 577
AEDFIN + D V+W +LL
Sbjct: 543 AEDFINSSGLENDSVLWHTLL 563
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/544 (23%), Positives = 234/544 (43%), Gaps = 53/544 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ Q AL A+ ++ + + + TYA +++AC + GR H +
Sbjct: 45 NTLIAGYATQGSARSALGAFRDARRDGAVAVDRFTYAAVLAACGGAGDWRSGRAAHGLAV 104
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+S + N +++MY KC +++ R+ FD+ +R+ VSW +++ + A
Sbjct: 105 VSGLARTAFVSNSVIDMYAKCRMIDEVRLAFDRAEERDEVSWNLLLSAYVRMGWPEVAAN 164
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGL-GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+ + M +SGV F G I+KACS L S + R LH VIK + + ++ MY
Sbjct: 165 VLVWMHRSGVELDAFALGGILKACSELEDSEDVRRMLHGCVIKVGLDLDVFVGSTMVDMY 224
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE------LEALCHFNEMLHHGAYQ 235
K + +A VF I ++V + +MIA F++LG + +EA+ ++ M +
Sbjct: 225 AKNGGLEEAIKVFGSIPSQNVVIYNTMIAGFARLGNDPCPEIRMEAVRIYSNMFRR-RIR 283
Query: 236 PNEFIFGSVFSACS----------------------------------NFARIL------ 255
P++F F SV C+ + AR++
Sbjct: 284 PSKFTFKSVLEVCNLTNAVRCWRQIHAHVILFGFEDDEFIGNALINLYSKARLVDDSLRC 343
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F+ ++ +W ++I + ++++A++LF +R + PD T+ S++ AC
Sbjct: 344 FHRTPKQEIFTWTSMITAFVRNEHSDKALNLFKGLRYTGVEPDQFTMSSVMNACADLSMP 403
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
Q+H Y +K GFD N+ + MY L A F+ + + D+ SW+ +I +
Sbjct: 404 IACEQIHCYAVKSGFDRFTLCGNSQIEMYRCTGDLKAAKKTFERI-PSLDTFSWSQMILS 462
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAF 434
H E LF +M + + F V+ AC+ + E ++
Sbjct: 463 YAVHGHEREALLLFKKMRDCSVIINEFAFLAVLVACSHQGLIDEGFRHYESMVSDYSFVP 522
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNF--MENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
DV + ++D+ G + A N +EN D V W +L+ G D +K +
Sbjct: 523 DVKHIACMVDLLGHVGKVADAEDFINSSGLEN-DSVLWHTLLRACRIHGDKDRGIKTGEK 581
Query: 493 MRSL 496
+ +L
Sbjct: 582 LMTL 585
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 185/416 (44%), Gaps = 52/416 (12%)
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
+I++ + L N L+A Y + AR +F G+ R+DV +W ++IA ++ G A
Sbjct: 1 MIRAGYRPGLFLSNNLLAAYVRCADTRSARLLFDGMPRRDVVTWNTLIAGYATQGSARSA 60
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------------------- 249
L F + GA + F + +V +AC
Sbjct: 61 LGAFRDARRDGAVAVDRFTYAAVLAACGGAGDWRSGRAAHGLAVVSGLARTAFVSNSVID 120
Query: 250 --------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
+ R+ F+ + D SWN L++ A ++ M + D
Sbjct: 121 MYAKCRMIDEVRLAFDRAEERDEVSWNLLLSAYVRMGWPEVAANVLVWMHRSGVELDAFA 180
Query: 302 VHSLLCACIGRLTLYQGMQ--VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+ +L AC L + ++ +H +IK+G D +V V + ++ MYAK L A+ VF
Sbjct: 181 LGGILKAC-SELEDSEDVRRMLHGCVIKVGLDLDVFVGSTMVDMYAKNGGLEEAIKVFGS 239
Query: 360 LGKNADSVSWNSIIA--ACLQHNQAEEL----FRLFSRMLASQIKPDHITFNDVMGACAK 413
+ + + V +N++IA A L ++ E+ R++S M +I+P TF V+ C
Sbjct: 240 I-PSQNVVIYNTMIAGFARLGNDPCPEIRMEAVRIYSNMFRRRIRPSKFTFKSVLEVCNL 298
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
++ Q+H ++ G D F+ N L+++Y K + + + F+ ++ +W+S+
Sbjct: 299 TNAVRCWRQIHAHVILFGFEDDEFIGNALINLYSKARLVDDSLRCFHRTPKQEIFTWTSM 358
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL--VEEGLHLYRI 527
I + + D+AL LF +R GV P+ T+ V+ AC+ + + E +H Y +
Sbjct: 359 ITAFVRNEHSDKALNLFKGLRYTGVEPDQFTMSSVMNACADLSMPIACEQIHCYAV 414
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 9/258 (3%)
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
+I+ G+ + + N +L Y +C+ +A L+F + + D V+WN++IA A
Sbjct: 1 MIRAGYRPGLFLSNNLLAAYVRCADTRSARLLFDGMPRR-DVVTWNTLIAGYATQGSARS 59
Query: 385 LFRLFSRMLAS-QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
F + D T+ V+ AC H +GLA FV N ++
Sbjct: 60 ALGAFRDARRDGAVAVDRFTYAAVLAACGGAGDWRSGRAAHGLAVVSGLARTAFVSNSVI 119
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
D+Y KC + R F+ E D VSW+ L+ Y + G + A + M GV +
Sbjct: 120 DMYAKCRMIDEVRLAFDRAEERDEVSWNLLLSAYVRMGWPEVAANVLVWMHRSGVELDAF 179
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMEN---EYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
L G+L ACS +E+ + R++ + G+ S +VD+ A+ G + EA
Sbjct: 180 ALGGILKACSE---LEDSEDVRRMLHGCVIKVGLDLDVFVGSTMVDMYAKNGGLEEAIKV 236
Query: 561 INQMACDADIVVWKSLLA 578
+ ++V++ +++A
Sbjct: 237 FGSIPSQ-NVVIYNTMIA 253
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
+ + G +F+ N L+ Y++C SAR LF+ M DVV+W++LI GYA G A
Sbjct: 1 MIRAGYRPGLFLSNNLLAAYVRCADTRSARLLFDGMPRRDVVTWNTLIAGYATQGSARSA 60
Query: 487 LKLFTRMRSLG-VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
L F R G V+ + T VL AC G G + + G+ T + V+
Sbjct: 61 LGAFRDARRDGAVAVDRFTYAAVLAACGGAGDWRSGRAAHGLAVVS-GLARTAFVSNSVI 119
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
D+ A+ + E ++ A + D V W LL++
Sbjct: 120 DMYAKCRMIDEVRLAFDR-AEERDEVSWNLLLSA 152
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 162/504 (32%), Positives = 266/504 (52%), Gaps = 58/504 (11%)
Query: 125 IQMLQSGVMPGQFT-----FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
+Q+L+S + PG+ + + S+++ C+ + + G Q+HAHVIKS N+L+
Sbjct: 103 LQLLKS-IDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLT 161
Query: 180 MYTKFDR-ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
+Y K + R VF G+ KDV SW SMI+ + ++G + +L F +ML +G +PN
Sbjct: 162 LYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGV-EPNA 220
Query: 239 FIFGSVFSACSNF----------------------------------------ARILFNE 258
F +V ACS AR LF+E
Sbjct: 221 FTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDE 280
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCAC--IGRLTL 315
+ PD W ++I+ + + +EA+ F M RD + PDG T ++L AC +GRL
Sbjct: 281 LLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLK- 339
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
QG +VH+ +I GF NV V ++++ MY KC + + +F + +SVSW++++
Sbjct: 340 -QGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRM-PIKNSVSWSALLGG 397
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
Q+ + + ++F +M K D F ++ CA +A++ ++HC + G D
Sbjct: 398 YCQNGDFKSVIQIFRKME----KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRD 453
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
V V + L+D+Y KCG + A+ +F+ M ++++W+S+I G+AQ G G+EAL++F +M
Sbjct: 454 VIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVK 513
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
G+ P+ ++ +G+L ACSH GLV+EG + M +YGI EH SC+VDLL RAG +
Sbjct: 514 EGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLE 573
Query: 556 EAEDFINQMACDADIVVWKSLLAS 579
EAE I D +W +LL +
Sbjct: 574 EAEILIETSDFRDDSSLWAALLGA 597
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/566 (26%), Positives = 268/566 (47%), Gaps = 50/566 (8%)
Query: 9 LCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQP 68
LCK + AL S + I +P YA L+ C+ + + G ++H H++ S +
Sbjct: 93 LCKSGELSGALQLLK-SIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEF 151
Query: 69 DVVLQNHILNMYGKCGS-LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
D + N +L +Y K G+ + R FD + ++V+SWT+MI+G + + ++++L+ +M
Sbjct: 152 DRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKM 211
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
L GV P FT ++IKACS LG + LGR H V+ S+ + +ALI M+ + +
Sbjct: 212 LAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCAL 271
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
DAR +F + D W S+I+A ++ + EAL F M P+ F FG+V +A
Sbjct: 272 DDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTA 331
Query: 248 CSNFARI----------------------------------------LFNEIDSPDLASW 267
C N R+ +F+ + + SW
Sbjct: 332 CGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSW 391
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
+AL+ G + + + +F +M +L G ++L C G + QG +VH I+
Sbjct: 392 SALLGGYCQNGDFKSVIQIFRKMEKVDLYCFG----TILRTCAGLAAVRQGKEVHCQYIR 447
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
G +V V +A++ +YAKC + A +F ++ + ++WNS+I Q+ + EE R
Sbjct: 448 KGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVR-NLITWNSMIGGFAQNGRGEEALR 506
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIY 446
+F++M+ IKPD+I+F ++ AC+ ++ + +TK G+ + + ++D+
Sbjct: 507 IFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLL 566
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL-VTL 505
+ G L A L + D S + +LG A C + + R + + P+ ++
Sbjct: 567 GRAGLLEEAEILIETSDFRDDSSLWAALLG-ACTTCTNYEIAERIAKRVMELEPDYHLSY 625
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENE 531
V + VG + L + R+M++
Sbjct: 626 VLLANVYKAVGRWNDALRIRRLMKDR 651
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 145/245 (59%), Gaps = 5/245 (2%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S+L + + ++EAL + Q + + T+ +++AC +L L+ G++VH ++ +
Sbjct: 293 ISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTG 352
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+VV+++ +++MYGKCGS+ +++ FD+MP +N VSW+A++ G QN I+++
Sbjct: 353 FCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFR 412
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + + + FG+I++ C+GL +V G+++H I+ +I ++AL+ +Y K
Sbjct: 413 KMEKVDL----YCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCG 468
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I A+ +F + +++ +W SMI F++ G EAL FN+M+ G +P+ F +
Sbjct: 469 CIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEG-IKPDYISFIGIL 527
Query: 246 SACSN 250
ACS+
Sbjct: 528 FACSH 532
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 150/300 (50%), Gaps = 9/300 (3%)
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
A+ L + E+ + SLL C L G+Q+H+++IK G + + V N++LT
Sbjct: 102 ALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLT 161
Query: 343 MYAKCSV-LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+Y K VF L D +SW S+I+ ++ + LF +MLA ++P+
Sbjct: 162 LYFKLGTDFPETRKVFDGLFVK-DVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNA 220
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
T + V+ AC+++ L++ H + G + + + L+D++ + +L AR+LF+
Sbjct: 221 FTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDE 280
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRM-RSLGVSPNLVTLVGVLTACSHVGLVEE 520
+ PD + W+S+I + DEAL+ F M R G+ P+ T VLTAC ++G +++
Sbjct: 281 LLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQ 340
Query: 521 G--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G +H I G + S +VD+ + G V E++ ++M + V W +LL
Sbjct: 341 GKEVHAKVITTGFCGNVVVE---SSLVDMYGKCGSVGESQRIFDRMPI-KNSVSWSALLG 396
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 178/589 (30%), Positives = 287/589 (48%), Gaps = 47/589 (7%)
Query: 33 IRPSTYAG--LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IRP Y+ ++ C+ L GR++H +I+ + + D L+ ++ MY C +A
Sbjct: 543 IRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAW 602
Query: 91 MGFDKMPQR-NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F K+ R N+V+W MI G +N +++LY +F ACS
Sbjct: 603 SLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHG 662
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
+ GRQ+H VIK +L+ MY K + DA+ VF + K+V +MI
Sbjct: 663 EVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMI 722
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFNEI----- 259
+AF G +AL +N+M G + F S+ S CS +F R + E+
Sbjct: 723 SAFIGNGRAYDALGLYNKM-KAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSM 781
Query: 260 ------------------------------DSPDLASWNALIAGVASHSNANEAMSLFSE 289
D+ +W ++IAG + +A+ LF
Sbjct: 782 QSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRA 841
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M + D + S++ A +G + G +H + IK G +S+V V +++ MY+K
Sbjct: 842 MEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGF 901
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL-FRLFSRMLASQIKPDHITFNDVM 408
+A +VF + N + V+WNS+I+ C N E+ L ++L D ++ V+
Sbjct: 902 AESAEMVFSSM-PNKNLVAWNSMIS-CYSWNGLPEMSINLLPQILQHGFYLDSVSITTVL 959
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
A + +A+L LH Y + + D+ V N L+D+Y+KCG L A+ +F M ++V
Sbjct: 960 VAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLV 1019
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
+W+S+I GY G +EA++LF M+ +P+ VT + ++T+CSH G+VEEGL+L+++M
Sbjct: 1020 TWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLM 1079
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
EYG+ P EH + VVDLL RAG + +A FI M DAD VW LL
Sbjct: 1080 RIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLL 1128
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 164/623 (26%), Positives = 295/623 (47%), Gaps = 55/623 (8%)
Query: 4 DYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILL 63
+ + +L +Q Y++AL + + ++ + T+ L+ C+SL +L GR +H I+
Sbjct: 411 EEIKALVQQGKYSQALELHSKTPHSA-LTTAKFTFPSLLKTCASLSNLYHGRTIHASIVT 469
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-----NVVSWTAMIAGCSQNYQEN 118
Q D + ++NMY KCG L A FDKM + ++ W +I G +
Sbjct: 470 MGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFE 529
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
+ + + +M + G+ P ++ ++ C+ L GRQ+H ++I++ + ALI
Sbjct: 530 EGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALI 589
Query: 179 AMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLG-----YELEAL---------- 222
MY+ R ++A ++F + R ++ +W MI F + G EL +L
Sbjct: 590 GMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVS 649
Query: 223 ---------CHFNEMLHHGA----------YQPNEFIFGSVF-----SACSNFARILFNE 258
C E+L G +Q + ++ S+ S A+ +F++
Sbjct: 650 ASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQ 709
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ ++ NA+I+ + A +A+ L+++M+ E D T+ SLL C + G
Sbjct: 710 VLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFG 769
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
VH+ +IK SNV + +A+LTMY KC +A VF + K D V+W S+IA Q
Sbjct: 770 RTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTM-KERDVVAWGSMIAGFCQ 828
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+ + ++ LF M +K D V+ A + ++E+ +H + K GL DVFV
Sbjct: 829 NRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFV 888
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
L+D+Y K G SA +F+ M N ++V+W+S+I Y+ G + ++ L ++ G
Sbjct: 889 ACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGF 948
Query: 499 SPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHC-SCVVDLLARAGCVH 555
+ V++ VL A S V + +G LH Y+I IP+ + ++D+ + GC+
Sbjct: 949 YLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQ----IPSDLQVENALIDMYVKCGCLK 1004
Query: 556 EAEDFINQMACDADIVVWKSLLA 578
A+ M ++V W S++A
Sbjct: 1005 YAQLIFENMP-RRNLVTWNSMIA 1026
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 223/456 (48%), Gaps = 43/456 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + + ++ ++L Y ++N N ++ +++ G +ACS L GR+VH ++
Sbjct: 618 NVMIGGFVENGMWEKSLELYSLAKNE-NCKLVSASFTGAFTACSHGEVLDFGRQVHCDVI 676
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
Q D + +L MY K GS+EDA+ FD++ + V AMI+ N + DA+
Sbjct: 677 KMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALG 736
Query: 123 LYIQMLQSGVMP-GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
LY +M ++G P FT S++ CS +GS GR +HA VIK S++ Q+AL+ MY
Sbjct: 737 LYNKM-KAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMY 795
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE--- 238
K DA +VF + +DV +WGSMIA F + +AL F M G ++
Sbjct: 796 YKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMT 855
Query: 239 ----------------FIFG---------SVFSACS-----------NFARILFNEIDSP 262
I G VF ACS A ++F+ + +
Sbjct: 856 SVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNK 915
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+L +WN++I+ + + +++L ++ D +++ ++L A L +G +H
Sbjct: 916 NLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLH 975
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+Y I++ S++ V NA++ MY KC L A L+F+ + + + V+WNS+IA H
Sbjct: 976 AYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRR-NLVTWNSMIAGYGSHGNC 1034
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
EE RLF M S+ PD +TF ++ +C+ +E
Sbjct: 1035 EEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVE 1070
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 182/387 (47%), Gaps = 40/387 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T + L+S CS + S GR VH ++ Q +V +Q+ +L MY KCGS EDA F M
Sbjct: 752 TISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTM 811
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R+VV+W +MIAG QN + DA+ L+ M + GV S+I A GL +V LG
Sbjct: 812 KERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGH 871
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H IK S + +L+ MY+KF A VFS + K++ +W SMI+ +S G
Sbjct: 872 LIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNG 931
Query: 217 YELEALCHFNEMLHHG----------------------------AYQ-----------PN 237
++ ++L HG AYQ N
Sbjct: 932 LPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVEN 991
Query: 238 EFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
I V C +A+++F + +L +WN++IAG SH N EA+ LF EM+ E P
Sbjct: 992 ALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAP 1051
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
D +T +L+ +C + +G+ + + I+ G + + +++ + + L +A
Sbjct: 1052 DEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSF 1111
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAE 383
+ + +AD W ++ AC H E
Sbjct: 1112 IRGMPIDADRSVWLCLLFACRAHRNME 1138
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 159/326 (48%), Gaps = 16/326 (4%)
Query: 252 ARILFNEIDSPDLASWNAL-------IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
ARI+ NE+ +P A + I + ++A+ L S+ L T S
Sbjct: 388 ARIIDNEL-TPKKAVLELMNLPQVEEIKALVQQGKYSQALELHSKTPHSALTTAKFTFPS 446
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
LL C LY G +H+ I+ MG S+ + +++ MY KC +L +AL VF ++ ++
Sbjct: 447 LLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESR 506
Query: 365 DSVS----WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
DS WN +I ++ EE F RM I+PD + + V+G C +++
Sbjct: 507 DSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAG 566
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN-PDVVSWSSLILGYAQ 479
Q+H YI + D ++ L+ +Y C A LF +EN ++V+W+ +I G+ +
Sbjct: 567 RQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVE 626
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTR 538
G +++L+L++ ++ + G TACSH +++ G ++ +++ + P
Sbjct: 627 NGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYV 686
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQM 564
C+ ++ + A++G V +A+ +Q+
Sbjct: 687 --CTSLLTMYAKSGSVEDAKKVFDQV 710
>gi|255541017|ref|XP_002511573.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550688|gb|EEF52175.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 954
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 167/545 (30%), Positives = 272/545 (49%), Gaps = 41/545 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T++ +++AC+SL ++LG+ + ++ C D+ + I+NMY KCG + DA F +M
Sbjct: 254 TFSSILTACASLEEVELGKGIQGWVI-KCCAKDIFVGTAIVNMYAKCGDIVDAVKEFSRM 312
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P RNVVSWTA+++G + A+K + +M + +FT ++I AC+ +
Sbjct: 313 PVRNVVSWTAIVSGFIKRDDSISALKFFKEMRKMKEETNKFTVTTVISACAKPHFIKEAI 372
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI-ARKDVTSWGSMIAAFSKL 215
Q+H ++K+ + + ALI MY K I + VF + K+ W MI++F+K
Sbjct: 373 QIHCWILKTGYYLDPVVGAALINMYAKLHAISSSEMVFREMEGVKNPGIWTIMISSFAK- 431
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSV------------------------------- 244
+ ++ L +P++F SV
Sbjct: 432 NQDSQSAIDLLLKLLQQGLRPDKFCLSSVLSVIDSLYLGREIHCYILKTGFVLDLSVGSS 491
Query: 245 ----FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
+S C + + +F +I D SW ++I+G H +A +A L +M PD
Sbjct: 492 LFTMYSKCGSIGDSYKVFEQIPVKDNISWTSMISGFTEHGHAYQAFELLRKMLTERSKPD 551
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
T ++L A +L +G ++H Y + V A++ MY+KC L +A +F
Sbjct: 552 QTTFSAILSAASSIHSLQKGKEIHGYAYRARLGDEALVGGALVNMYSKCGALESARKMFD 611
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
L D VS +S+++ Q+ EE LF ML S D + V+GA A + L+
Sbjct: 612 LLAVK-DQVSCSSLVSGYAQNGWLEEALLLFHEMLISNFTIDSFAVSSVLGAIAGLNRLD 670
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
TQLH ++ K GL DV V + L+ +Y KCGS+ K FN +++ D++SW+++I A
Sbjct: 671 FGTQLHAHLVKLGLDSDVSVGSSLVTVYSKCGSIEDCWKAFNQIDDADLISWTTMIASCA 730
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
Q G G EALK++ +MR G+ P+ VT VGVL+ACSH LVEEG + M ++G+ P
Sbjct: 731 QHGKGVEALKIYEQMRREGIRPDSVTFVGVLSACSHANLVEEGYFHFNSMTKDFGLEPNN 790
Query: 539 EHCSC 543
C+C
Sbjct: 791 LDCAC 795
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 161/584 (27%), Positives = 293/584 (50%), Gaps = 49/584 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY ++SAC++L + LG +V+ + + ++ ++++ + G DA F +
Sbjct: 153 TYGCVLSACAALETPNLGEQVYSLATKNGFYSNGHVRAGMIDLLARNGRFGDALRVFYDV 212
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
NVV W ++I+G ++ + A+ ++ QM + V+P FTF SI+ AC+ L V LG+
Sbjct: 213 SCENVVCWNSIISGAVKSGEYWIALDIFYQMSRRFVVPNSFTFSSILTACASLEEVELGK 272
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+ VIK + A++ MY K I+DA FS + ++V SW ++++ F K
Sbjct: 273 GIQGWVIKC-CAKDIFVGTAIVNMYAKCGDIVDAVKEFSRMPVRNVVSWTAIVSGFIKRD 331
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-------------------------- 250
+ AL F EM + N+F +V SAC+
Sbjct: 332 DSISALKFFKEM-RKMKEETNKFTVTTVISACAKPHFIKEAIQIHCWILKTGYYLDPVVG 390
Query: 251 ------FARI--------LFNEIDS-PDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+A++ +F E++ + W +I+ A + ++ A+ L ++ + L
Sbjct: 391 AALINMYAKLHAISSSEMVFREMEGVKNPGIWTIMISSFAKNQDSQSAIDLLLKLLQQGL 450
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD + S+L +LY G ++H YI+K GF ++ V +++ TMY+KC + ++
Sbjct: 451 RPDKFCLSSVLSVID---SLYLGREIHCYILKTGFVLDLSVGSSLFTMYSKCGSIGDSYK 507
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF+++ D++SW S+I+ +H A + F L +ML + KPD TF+ ++ A + +
Sbjct: 508 VFEQIPVK-DNISWTSMISGFTEHGHAYQAFELLRKMLTERSKPDQTTFSAILSAASSIH 566
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
SL+ ++H Y + L + V L+++Y KCG+L SARK+F+ + D VS SSL+
Sbjct: 567 SLQKGKEIHGYAYRARLGDEALVGGALVNMYSKCGALESARKMFDLLAVKDQVSCSSLVS 626
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
GYAQ G +EAL LF M + + + VL A + + ++ G L+ + + G+
Sbjct: 627 GYAQNGWLEEALLLFHEMLISNFTIDSFAVSSVLGAIAGLNRLDFGTQLHAHLV-KLGLD 685
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
S +V + ++ G + + NQ+ DAD++ W +++AS
Sbjct: 686 SDVSVGSSLVTVYSKCGSIEDCWKAFNQID-DADLISWTTMIAS 728
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 136/564 (24%), Positives = 270/564 (47%), Gaps = 53/564 (9%)
Query: 46 SSLRSLQLGRKVHDHILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSW 104
S+ +++ + +H H++ + + V+ N +L+ Y K G+L A FD +P +NV+SW
Sbjct: 60 SADHTVEETKVIHTHLIKTALFNSNTVVANSLLDWYCKSGALFYALKVFDTIPNKNVISW 119
Query: 105 TAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK 164
+I+G ++N D+ + + M SG P T+G ++ AC+ L + LG Q+++ K
Sbjct: 120 NVIISGYNRNSLFEDSWRFFSMMHFSGFDPNDITYGCVLSACAALETPNLGEQVYSLATK 179
Query: 165 SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCH 224
+ S+ + +I + + R DA VF ++ ++V W S+I+ K G AL
Sbjct: 180 NGFYSNGHVRAGMIDLLARNGRFGDALRVFYDVSCENVVCWNSIISGAVKSGEYWIALDI 239
Query: 225 FNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------------------ 254
F +M PN F F S+ +AC++ +
Sbjct: 240 FYQMSRRFVV-PNSFTFSSILTACASLEEVELGKGIQGWVIKCCAKDIFVGTAIVNMYAK 298
Query: 255 ---------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
F+ + ++ SW A+++G ++ A+ F EMR + + TV ++
Sbjct: 299 CGDIVDAVKEFSRMPVRNVVSWTAIVSGFIKRDDSISALKFFKEMRKMKEETNKFTVTTV 358
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
+ AC + + +Q+H +I+K G+ + V A++ MYAK + ++ +VF+E+ +
Sbjct: 359 ISACAKPHFIKEAIQIHCWILKTGYYLDPVVGAALINMYAKLHAISSSEMVFREMEGVKN 418
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
W +I++ ++ ++ L ++L ++PD + V+ + SL + ++HC
Sbjct: 419 PGIWTIMISSFAKNQDSQSAIDLLLKLLQQGLRPDKFCLSSVLSV---IDSLYLGREIHC 475
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
YI KTG D+ V + L +Y KCGS+G + K+F + D +SW+S+I G+ + G +
Sbjct: 476 YILKTGFVLDLSVGSSLFTMYSKCGSIGDSYKVFEQIPVKDNISWTSMISGFTEHGHAYQ 535
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL----YRIMENEYGIIPTREHC 541
A +L +M + P+ T +L+A S + +++G + YR + ++
Sbjct: 536 AFELLRKMLTERSKPDQTTFSAILSAASSIHSLQKGKEIHGYAYRARLGDEALVG----- 590
Query: 542 SCVVDLLARAGCVHEAEDFINQMA 565
+V++ ++ G + A + +A
Sbjct: 591 GALVNMYSKCGALESARKMFDLLA 614
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 154/316 (48%), Gaps = 42/316 (13%)
Query: 34 RPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
RP + L S S + SL LGR++H +IL + D+ + + + MY KCGS+ D+ F
Sbjct: 451 RPDKFC-LSSVLSVIDSLYLGREIHCYILKTGFVLDLSVGSSLFTMYSKCGSIGDSYKVF 509
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
+++P ++ +SWT+MI+G +++ A +L +ML P Q TF +I+ A S + S+
Sbjct: 510 EQIPVKDNISWTSMISGFTEHGHAYQAFELLRKMLTERSKPDQTTFSAILSAASSIHSLQ 569
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
G+++H + ++ G + AL+ MY+K + AR +F +A KD S S+++ ++
Sbjct: 570 KGKEIHGYAYRARLGDEALVGGALVNMYSKCGALESARKMFDLLAVKDQVSCSSLVSGYA 629
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------- 254
+ G+ EAL F+EML + + F SV A + R+
Sbjct: 630 QNGWLEEALLLFHEMLISN-FTIDSFAVSSVLGAIAGLNRLDFGTQLHAHLVKLGLDSDV 688
Query: 255 ---------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
FN+ID DL SW +IA A H EA+ ++ +MR
Sbjct: 689 SVGSSLVTVYSKCGSIEDCWKAFNQIDDADLISWTTMIASCAQHGKGVEALKIYEQMRRE 748
Query: 294 ELLPDGLTVHSLLCAC 309
+ PD +T +L AC
Sbjct: 749 GIRPDSVTFVGVLSAC 764
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 167/330 (50%), Gaps = 5/330 (1%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+A +F+ I + ++ SWN +I+G +S ++ FS M P+ +T +L AC
Sbjct: 103 YALKVFDTIPNKNVISWNVIISGYNRNSLFEDSWRFFSMMHFSGFDPNDITYGCVLSACA 162
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
T G QV+S K GF SN V ++ + A+ +AL VF ++ + V WN
Sbjct: 163 ALETPNLGEQVYSLATKNGFYSNGHVRAGMIDLLARNGRFGDALRVFYDVSCE-NVVCWN 221
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
SII+ ++ + +F +M + P+ TF+ ++ ACA + +E+ + ++ K
Sbjct: 222 SIISGAVKSGEYWIALDIFYQMSRRFVVPNSFTFSSILTACASLEEVELGKGIQGWVIKC 281
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
A D+FV ++++Y KCG + A K F+ M +VVSW++++ G+ + ALK F
Sbjct: 282 -CAKDIFVGTAIVNMYAKCGDIVDAVKEFSRMPVRNVVSWTAIVSGFIKRDDSISALKFF 340
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLA 549
MR + N T+ V++AC+ ++E + ++ I++ Y + P + ++++ A
Sbjct: 341 KEMRKMKEETNKFTVTTVISACAKPHFIKEAIQIHCWILKTGYYLDPVVG--AALINMYA 398
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + +E +M + +W +++S
Sbjct: 399 KLHAISSSEMVFREMEGVKNPGIWTIMISS 428
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 135/238 (56%), Gaps = 3/238 (1%)
Query: 15 YNEALVAYDFSQNNTNIRIRP--STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
+ A A++ + R +P +T++ ++SA SS+ SLQ G+++H + ++ + ++
Sbjct: 530 HGHAYQAFELLRKMLTERSKPDQTTFSAILSAASSIHSLQKGKEIHGYAYRARLGDEALV 589
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
++NMY KCG+LE AR FD + ++ VS +++++G +QN +A+ L+ +ML S
Sbjct: 590 GGALVNMYSKCGALESARKMFDLLAVKDQVSCSSLVSGYAQNGWLEEALLLFHEMLISNF 649
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
F S++ A +GL + G QLHAH++K S + ++L+ +Y+K I D
Sbjct: 650 TIDSFAVSSVLGAIAGLNRLDFGTQLHAHLVKLGLDSDVSVGSSLVTVYSKCGSIEDCWK 709
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
F+ I D+ SW +MIA+ ++ G +EAL + +M G +P+ F V SACS+
Sbjct: 710 AFNQIDDADLISWTTMIASCAQHGKGVEALKIYEQMRREGI-RPDSVTFVGVLSACSH 766
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 87/164 (53%), Gaps = 3/164 (1%)
Query: 416 SLEMVTQLHCYITKTGL-AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
++E +H ++ KT L + V N L+D Y K G+L A K+F+ + N +V+SW+ +I
Sbjct: 64 TVEETKVIHTHLIKTALFNSNTVVANSLLDWYCKSGALFYALKVFDTIPNKNVISWNVII 123
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
GY + +++ + F+ M G PN +T VL+AC+ + G +Y + + G
Sbjct: 124 SGYNRNSLFEDSWRFFSMMHFSGFDPNDITYGCVLSACAALETPNLGEQVYS-LATKNGF 182
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++DLLAR G +A ++C+ ++V W S+++
Sbjct: 183 YSNGHVRAGMIDLLARNGRFGDALRVFYDVSCE-NVVCWNSIIS 225
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 162/504 (32%), Positives = 266/504 (52%), Gaps = 58/504 (11%)
Query: 125 IQMLQSGVMPGQFT-----FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
+Q+L+S + PG+ + + S+++ C+ + + G Q+HAHVIKS N+L+
Sbjct: 44 LQLLKS-IDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLT 102
Query: 180 MYTKFDR-ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
+Y K + R VF G+ KDV SW SMI+ + ++G + +L F +ML +G +PN
Sbjct: 103 LYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGV-EPNA 161
Query: 239 FIFGSVFSACSNF----------------------------------------ARILFNE 258
F +V ACS AR LF+E
Sbjct: 162 FTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDE 221
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCAC--IGRLTL 315
+ PD W ++I+ + + +EA+ F M RD + PDG T ++L AC +GRL
Sbjct: 222 LLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLK- 280
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
QG +VH+ +I GF NV V ++++ MY KC + + +F + +SVSW++++
Sbjct: 281 -QGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRM-PIKNSVSWSALLGG 338
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
Q+ + + ++F +M K D F ++ CA +A++ ++HC + G D
Sbjct: 339 YCQNGDFKSVIQIFRKME----KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRD 394
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
V V + L+D+Y KCG + A+ +F+ M ++++W+S+I G+AQ G G+EAL++F +M
Sbjct: 395 VIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVK 454
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
G+ P+ ++ +G+L ACSH GLV+EG + M +YGI EH SC+VDLL RAG +
Sbjct: 455 EGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLE 514
Query: 556 EAEDFINQMACDADIVVWKSLLAS 579
EAE I D +W +LL +
Sbjct: 515 EAEILIETSDFRDDSSLWAALLGA 538
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/566 (26%), Positives = 268/566 (47%), Gaps = 50/566 (8%)
Query: 9 LCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQP 68
LCK + AL S + I +P YA L+ C+ + + G ++H H++ S +
Sbjct: 34 LCKSGELSGALQLLK-SIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEF 92
Query: 69 DVVLQNHILNMYGKCGS-LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
D + N +L +Y K G+ + R FD + ++V+SWT+MI+G + + ++++L+ +M
Sbjct: 93 DRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKM 152
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
L GV P FT ++IKACS LG + LGR H V+ S+ + +ALI M+ + +
Sbjct: 153 LAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCAL 212
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
DAR +F + D W S+I+A ++ + EAL F M P+ F FG+V +A
Sbjct: 213 DDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTA 272
Query: 248 CSNFARI----------------------------------------LFNEIDSPDLASW 267
C N R+ +F+ + + SW
Sbjct: 273 CGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSW 332
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
+AL+ G + + + +F +M +L G ++L C G + QG +VH I+
Sbjct: 333 SALLGGYCQNGDFKSVIQIFRKMEKVDLYCFG----TILRTCAGLAAVRQGKEVHCQYIR 388
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
G +V V +A++ +YAKC + A +F ++ + ++WNS+I Q+ + EE R
Sbjct: 389 KGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVR-NLITWNSMIGGFAQNGRGEEALR 447
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIY 446
+F++M+ IKPD+I+F ++ AC+ ++ + +TK G+ + + ++D+
Sbjct: 448 IFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLL 507
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL-VTL 505
+ G L A L + D S + +LG A C + + R + + P+ ++
Sbjct: 508 GRAGLLEEAEILIETSDFRDDSSLWAALLG-ACTTCTNYEIAERIAKRVMELEPDYHLSY 566
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENE 531
V + VG + L + R+M++
Sbjct: 567 VLLANVYKAVGRWNDALRIRRLMKDR 592
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 145/245 (59%), Gaps = 5/245 (2%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S+L + + ++EAL + Q + + T+ +++AC +L L+ G++VH ++ +
Sbjct: 234 ISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTG 293
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+VV+++ +++MYGKCGS+ +++ FD+MP +N VSW+A++ G QN I+++
Sbjct: 294 FCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFR 353
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + + + FG+I++ C+GL +V G+++H I+ +I ++AL+ +Y K
Sbjct: 354 KMEKVDL----YCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCG 409
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I A+ +F + +++ +W SMI F++ G EAL FN+M+ G +P+ F +
Sbjct: 410 CIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGI-KPDYISFIGIL 468
Query: 246 SACSN 250
ACS+
Sbjct: 469 FACSH 473
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 150/300 (50%), Gaps = 9/300 (3%)
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
A+ L + E+ + SLL C L G+Q+H+++IK G + + V N++LT
Sbjct: 43 ALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLT 102
Query: 343 MYAKCSV-LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+Y K VF L D +SW S+I+ ++ + LF +MLA ++P+
Sbjct: 103 LYFKLGTDFPETRKVFDGLFVK-DVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNA 161
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
T + V+ AC+++ L++ H + G + + + L+D++ + +L AR+LF+
Sbjct: 162 FTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDE 221
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRM-RSLGVSPNLVTLVGVLTACSHVGLVEE 520
+ PD + W+S+I + DEAL+ F M R G+ P+ T VLTAC ++G +++
Sbjct: 222 LLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQ 281
Query: 521 G--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G +H I G + S +VD+ + G V E++ ++M + V W +LL
Sbjct: 282 GKEVHAKVITTGFCGNVVVE---SSLVDMYGKCGSVGESQRIFDRMPI-KNSVSWSALLG 337
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 158/510 (30%), Positives = 265/510 (51%), Gaps = 40/510 (7%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG-VMP 134
+L + + DAR FD+ P R WT I+GC++ + D ++ + +ML G P
Sbjct: 51 VLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATP 110
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL--IAQNALIAMYTKFDRILDARN 192
F ++++ C+G+G V G+++H ++++ G HL + NA++ MY K + AR
Sbjct: 111 NAFVLAAVVRCCAGMGDVESGKRVHGWMLRN--GVHLDVVLCNAVLDMYAKCGQFERARR 168
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA 252
VF +A +D SW I A + G I GS+
Sbjct: 169 VFGAMAERDAVSWNIAIGACIQSGD----------------------ILGSM-------- 198
Query: 253 RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
LF+E D SWN +I+G+ +A +A+S M ++ + T +S G
Sbjct: 199 -QLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYT-YSTAFVLAGM 256
Query: 313 LTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV--SW 369
L L G Q+H ++ + + V ++++ MY KC +L A VF + +W
Sbjct: 257 LLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAW 316
Query: 370 NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
++++A +Q+ + EE LF RML + D T V ACA + +E Q+H + K
Sbjct: 317 STMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEK 376
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
D + + ++D+Y KCG+L AR +F+ ++ W+S++ YA G G A++L
Sbjct: 377 LWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIEL 436
Query: 490 FTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLA 549
F RM + ++PN +TLVGVL+ACSHVGLV EG ++ M+ EYGI+P+ EH +C+VDL
Sbjct: 437 FERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYG 496
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLLAS 579
R+G + +A++FI + + + +VWK+LL++
Sbjct: 497 RSGLLDKAKNFIEENNINHEAIVWKTLLSA 526
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 194/463 (41%), Gaps = 90/463 (19%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTY--AGLISACSSLRSLQLGRKVHDHILL 63
+S ++ Y + + A F++ P+ + A ++ C+ + ++ G++VH +L
Sbjct: 83 ISGCARRGRYADGMRA--FAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLR 140
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN--------- 114
+ DVVL N +L+MY KCG E AR F M +R+ VSW I C Q+
Sbjct: 141 NGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQL 200
Query: 115 YQEN----------------------DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
+ E+ DA+ +M Q+GV+ +T+ + L
Sbjct: 201 FDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLP 260
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF---SGIARKDVTSWGSMI 209
LGRQLH V+ + +++L+ MY K + A +VF S + R +W +M+
Sbjct: 261 DLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMV 320
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------ 251
A + + G E EAL F ML G + F SV +AC+N
Sbjct: 321 AGYVQNGREEEALDLFRRMLREGV-AADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWY 379
Query: 252 ----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
AR +F+ + ++A W +++ ASH A+ LF
Sbjct: 380 KLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFER 439
Query: 290 MRDRELLPDGLTVHSLLCAC-----IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
M ++ P+ +T+ +L AC + LY Y G ++ N I+ +Y
Sbjct: 440 MTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEY----GIVPSIEHYNCIVDLY 495
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACL--QHNQAEEL 385
+ +L A +E N +++ W ++++AC QHN+ +L
Sbjct: 496 GRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKL 538
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 177/622 (28%), Positives = 311/622 (50%), Gaps = 52/622 (8%)
Query: 2 SNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
+N + ++ + E L + ++ + + +T + ++ AC S+ LG ++H
Sbjct: 67 ANRVLFDYARRGMVPEVLDQFSVARRG-GVLVDSATLSCVLKACRSVPDRVLGEQLH--C 123
Query: 62 LLSKCQPD---VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
L KC D V +++MY KCGS+ + F+ MP++NVV+WT+++ GC+ +
Sbjct: 124 LCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHS 183
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
+ + L+ +M G+ P FTF S++ A + G++ LG+++HA +K S + N+L+
Sbjct: 184 EVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLM 243
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE----------- 227
MY K + DA++VF+ + +D+ SW +++A ELEAL F+E
Sbjct: 244 NMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQS 303
Query: 228 ------------------------MLHHGAYQPNEFI--FGSVFSACSNFA---RILFNE 258
+L HG + + +S C A I
Sbjct: 304 TYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMT 363
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
S ++ SW A+I+G + + A+ LFS MR+ ++P+ T ++L A + L
Sbjct: 364 TGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILP---- 419
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
Q+H+ +IK + V A+L Y+K +AL +FK + + D V+W+++++ Q
Sbjct: 420 PQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMI-EQKDVVAWSAMLSCHAQ 478
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACA-KMASLEMVTQLHCYITKTGLAFDVF 437
E LF++M IKP+ T + V+ ACA A ++ Q H K +
Sbjct: 479 AGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAIC 538
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
V + L+ +Y + G++ SA+ +F + D+VSW+S+I GYAQ G +A++ F +M + G
Sbjct: 539 VSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASG 598
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
+ + VT + V+ C+H GLV EG + M ++ I PT EH +C+VDL +RAG + E
Sbjct: 599 IQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDET 658
Query: 558 EDFINQMACDADIVVWKSLLAS 579
I M A +VW++LL +
Sbjct: 659 MSLIRDMPFPAGAMVWRTLLGA 680
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 204/441 (46%), Gaps = 52/441 (11%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
++ STYA +I C++L+ L L R++H +L + + + Y KCG L DA
Sbjct: 299 KMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALN 358
Query: 92 GFD-KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F RNVVSWTA+I+GC QN A+ L+ +M + VMP +FT+ +++KA +
Sbjct: 359 IFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI- 417
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
L Q+HA VIK+ + AL+A Y+KF DA ++F I +KDV +W +M++
Sbjct: 418 ---LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLS 474
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------- 249
++ G A FN+M G +PNEF SV AC+
Sbjct: 475 CHAQAGDCEGATYLFNKMAIQG-IKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRY 533
Query: 250 --------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
+ A+I+F DL SWN++I+G A H + +A+ F +
Sbjct: 534 HDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQ 593
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCS 348
M + DG+T +++ C + +G Q +++ + + ++ +Y++
Sbjct: 594 MEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAG 653
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF---N 405
L + + +++ A ++ W +++ AC H EL + + L S D T+ +
Sbjct: 654 KLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNV-ELGKFSADKLLSLEPHDSSTYVLLS 712
Query: 406 DVMGACAKMASLEMVTQLHCY 426
++ A K + V +L Y
Sbjct: 713 NIYAAAGKWKERDEVRKLMDY 733
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 3/221 (1%)
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
E+ + +V N ++ + E+ FS + D T + V+ AC +
Sbjct: 57 EIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRV 116
Query: 419 MVTQLHCYITKTGLAF-DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
+ QLHC K G +V L+D+Y+KCGS+ ++F M +VV+W+SL+ G
Sbjct: 117 LGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGC 176
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
A E + LF RMR+ G+ PN T VL+A + G ++ G ++ ++G +
Sbjct: 177 AHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVH-AQSVKFGCRSS 235
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
C+ ++++ A+ G V +A+ N M D+V W +L+A
Sbjct: 236 VFVCNSLMNMYAKCGLVEDAKSVFNWMETR-DMVSWNTLMA 275
>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 884
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 168/586 (28%), Positives = 298/586 (50%), Gaps = 45/586 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S++ L+ AC+ LR ++ G ++H ++ + N +++MY K L AR FD
Sbjct: 183 SSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 242
Query: 96 MPQR-NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
++ + V W ++++ S + + + ++L+ +M +G P +T S + AC G L
Sbjct: 243 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL 302
Query: 155 GRQLHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
G+++HA V+KS H S L NALIAMYT+ ++ A + + DV +W S+I +
Sbjct: 303 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 362
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL------------------ 255
+ EAL F++M+ G ++ +E S+ +A + +L
Sbjct: 363 QNLMYKEALEFFSDMIAAG-HKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 256 ----------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
F + DL SW +IAG A + EA+ LF ++ +
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ D + + S+L A ++ ++H +I++ G V + N ++ +Y KC + A
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYA 540
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
VF+ + K D VSW S+I++ + E LF RM+ + + D + ++ A A
Sbjct: 541 TRVFESI-KGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 599
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+++L ++HCY+ + G + + ++D+Y CG L SA+ +F+ +E ++ ++S+
Sbjct: 600 LSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSM 659
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I Y GCG A++LF +MR VSP+ ++ + +L ACSH GL++EG +IME+EY
Sbjct: 660 INAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYE 719
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ P EH C+VD+L RA CV EA +F+ M + VW +LLA+
Sbjct: 720 LEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAA 765
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 167/543 (30%), Positives = 273/543 (50%), Gaps = 56/543 (10%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
C + EA D S+NN+ + +A ++ C R++ GR++H I K P
Sbjct: 59 CFDGVLTEAFQRLDVSENNSPV----EAFAYVLELCGKRRAVSQGRQLHSRIF--KTFPS 112
Query: 70 V---VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
L ++ MYGKCGSL+DA FD+MP R +W MI N + A+ LY
Sbjct: 113 FELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWN 172
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M GV G +F +++KAC+ L + G +LH+ ++K + S NAL++MY K D
Sbjct: 173 MRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDD 232
Query: 187 ILDARNVFSGIARK-DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ AR +F G K D W S+++++S G LE L F EM H PN + S
Sbjct: 233 LSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREM-HMTGPAPNSYTIVSAL 291
Query: 246 SACSNF-----------------------------------------ARILFNEIDSPDL 264
+AC F A + ++++ D+
Sbjct: 292 TACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADV 351
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT-LYQGMQVHS 323
+WN+LI G + EA+ FS+M D +++ S++ A GRL+ L GM++H+
Sbjct: 352 VTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAAS-GRLSNLLAGMELHA 410
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
Y+IK G+DSN+ V N ++ MY+KC++ C F + + D +SW ++IA Q++
Sbjct: 411 YVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM-HDKDLISWTTVIAGYAQNDCHV 469
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
E LF + +++ D + ++ A + + S+ +V ++HC+I + GL D + N L+
Sbjct: 470 EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELV 528
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
D+Y KC ++G A ++F ++ DVVSW+S+I A G EA++LF RM G+S + V
Sbjct: 529 DVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSV 588
Query: 504 TLV 506
L+
Sbjct: 589 ALL 591
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 174/345 (50%), Gaps = 13/345 (3%)
Query: 239 FIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
F++G S + A +F+E+ +WN +I S+ A++L+ MR E +P
Sbjct: 124 FMYGKCGSL--DDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMR-VEGVPL 180
Query: 299 GLT-VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
GL+ +LL AC + G ++HS ++K+G+ S + NA+++MYAK L A +F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+ D+V WNSI+++ ++ E LF M + P+ T + AC +
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 418 EMVTQLHCYITKTGL-AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
++ ++H + K+ + +++V N L+ +Y +CG + A ++ M N DVV+W+SLI G
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGI 534
Y Q EAL+ F+ M + G + V++ ++ A + + G LH Y I ++G
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI---KHGW 417
Query: 535 IPTREHCSCVVDLLARAGCV-HEAEDFINQMACDADIVVWKSLLA 578
+ + ++D+ ++ + F+ D D++ W +++A
Sbjct: 418 DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH--DKDLISWTTVIA 460
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 138/278 (49%), Gaps = 18/278 (6%)
Query: 309 CIGRLTLYQGMQVHSYIIKM--GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
C R + QG Q+HS I K F+ + + ++ MY KC L +A VF E+ + +
Sbjct: 90 CGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVFDEM-PDRTA 147
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
+WN++I A + + + L+ M + +F ++ ACAK+ + ++LH
Sbjct: 148 FAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSL 207
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN-FMENPDVVSWSSLILGYAQFGCGDE 485
+ K G F++N L+ +Y K L +AR+LF+ F E D V W+S++ Y+ G E
Sbjct: 208 LVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLE 267
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH----- 540
L+LF M G +PN T+V LTAC + G ++ ++ + H
Sbjct: 268 TLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH------ASVLKSSTHSSELY 321
Query: 541 -CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
C+ ++ + R G + +AE + QM +AD+V W SL+
Sbjct: 322 VCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 194/441 (43%), Gaps = 61/441 (13%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
+I+A L +L G ++H +++ ++ + N +++MY KC F +M ++
Sbjct: 392 IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKD 451
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
++SWT +IAG +QN +A++L+ + + + + GSI++A S L S+ + +++H
Sbjct: 452 LISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
H+++ +I QN L+ +Y K + A VF I KDV SW SMI++ + G E E
Sbjct: 512 HILRKGLLDTVI-QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570
Query: 221 ALCHFNEMLHHGAYQPNEFIF------------------------------GSV------ 244
A+ F M+ G + + GS+
Sbjct: 571 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVD 630
Query: 245 -FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
++ C + A+ +F+ I+ L + ++I H A+ LF +MR + PD ++
Sbjct: 631 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS 690
Query: 302 VHSLLCACIGRLTLYQG-----MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
+LL AC L +G + H Y ++ + V ++ M + + + A
Sbjct: 691 FLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV----CLVDMLGRANCVVEAFEF 746
Query: 357 FKELGKNADSVSWNSIIAACLQHNQ-------AEELFRLFSR-----MLASQIKPDHITF 404
K + + W +++AAC H++ A+ L L + +L S + + +
Sbjct: 747 VKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRW 806
Query: 405 NDVMGACAKMASLEMVTQLHC 425
NDV AKM + M C
Sbjct: 807 NDVEKVRAKMKASGMEKHPGC 827
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 2/196 (1%)
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV-FVMNGLM 443
L F R+ S+ F V+ C K ++ QLH I KT +F++ F+ L+
Sbjct: 64 LTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLV 123
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
+Y KCGSL A K+F+ M + +W+++I Y G AL L+ MR GV L
Sbjct: 124 FMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLS 183
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
+ +L AC+ + + G L+ ++ + G T + +V + A+ + A +
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLL-VKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 242
Query: 564 MACDADIVVWKSLLAS 579
D V+W S+L+S
Sbjct: 243 FQEKGDAVLWNSILSS 258
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 176/586 (30%), Positives = 299/586 (51%), Gaps = 48/586 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPD--VVLQNHILNMYGKCGSLEDARMGFD 94
T+ ++ AC + + G ++H L+ KC D V + N +++MY KC + AR FD
Sbjct: 12 TFPCVLKACGVVEDIHRGAEIHG--LIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFD 69
Query: 95 KMPQRN-VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
+M +RN VVSW ++I+ S N Q +A+ L+ +M ++GV +T + ++AC
Sbjct: 70 RMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKK 129
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
LG ++HA ++KS + NAL+AM+ +F ++ A +F + KD +W SMIA F+
Sbjct: 130 LGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFT 189
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA-------------------------- 247
+ G EAL F L +P+E S+ +A
Sbjct: 190 QNGLYNEAL-QFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNL 248
Query: 248 --------------CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
C +A ++F+++ + DL SW +IA A ++ EA+ L +++ +
Sbjct: 249 RIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTK 308
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ D + + S L AC G L +VH Y +K G S++ + N I+ +YA C + A
Sbjct: 309 GMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADCGNINYA 367
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
+F+ + K D VSW S+I+ + + A E +F M + ++PD IT ++ A A
Sbjct: 368 TRMFESI-KCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAAS 426
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+++L ++H +I + G + +N L+D+Y CGSL +A K+F + +V W+++
Sbjct: 427 LSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTM 486
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I Y G G A++LF+ M + P+ +T + +L ACSH GL+ EG L M+ +Y
Sbjct: 487 INAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQ 546
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ P EH +C+VDLL RA + EA F+ M + VW + L +
Sbjct: 547 LEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGA 592
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 214/420 (50%), Gaps = 46/420 (10%)
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
GV FTF ++KAC + + G ++H +IK + S + N+L++MY K + IL A
Sbjct: 5 GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA 64
Query: 191 RNVFSGI-ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
R +F + R DV SW S+I+A+S G +EAL F EM G N + + AC
Sbjct: 65 RKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGV-GANTYTLVAALQACE 123
Query: 250 N----------------------------------------FARILFNEIDSPDLASWNA 269
+ +A +F+E+D D +WN+
Sbjct: 124 DSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNS 183
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT-LYQGMQVHSYIIKM 328
+IAG + NEA+ F ++D L PD +++ S+L A GRL L G ++H+Y +K
Sbjct: 184 MIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAAS-GRLGYLLNGKEIHAYAMKN 242
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
DSN+ + N ++ MY+KC + A LVF ++ N D +SW ++IAA Q+N E +L
Sbjct: 243 WLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKM-INKDLISWTTVIAAYAQNNCHTEALKL 301
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
++ + D + + AC+ + L ++H Y K GL+ D+ + N ++D+Y
Sbjct: 302 LRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYAD 360
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
CG++ A ++F ++ DVVSW+S+I Y G +EAL +F M+ V P+ +TLV +
Sbjct: 361 CGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSI 420
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 155/284 (54%), Gaps = 6/284 (2%)
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D T +L AC +++G ++H IIK G+DS V V N++++MYAKC+ + A +F
Sbjct: 9 DSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLF 68
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+ + D VSWNSII+A + Q E LF M + + + T + AC +
Sbjct: 69 DRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFK 128
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
++ ++H I K+ DV+V N L+ ++++ G + A ++F+ ++ D ++W+S+I G+
Sbjct: 129 KLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGF 188
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGII 535
Q G +EAL+ F ++ + P+ V+L+ +L A +G + G +H Y M+N +
Sbjct: 189 TQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAY-AMKN--WLD 245
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++D+ ++ CV A ++M + D++ W +++A+
Sbjct: 246 SNLRIGNTLIDMYSKCCCVAYAGLVFDKMI-NKDLISWTTVIAA 288
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 161/347 (46%), Gaps = 43/347 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + LYNEAL + Q+ N++ + +++A L L G+++H + +
Sbjct: 182 NSMIAGFTQNGLYNEALQFFCGLQD-ANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ ++ + N +++MY KC + A + FDKM ++++SWT +IA +QN +A+K
Sbjct: 241 KNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALK 300
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L ++ G+ GS + ACSGL + +++H + +K S L+ QN +I +Y
Sbjct: 301 LLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYA 359
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE---- 238
I A +F I KDV SW SMI+ + G EAL F ++ + +P+
Sbjct: 360 DCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVF-YLMKETSVEPDSITLV 418
Query: 239 --------------------FIF-------GS-------VFSACSNF--ARILFNEIDSP 262
FIF GS +++ C + A +F S
Sbjct: 419 SILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSK 478
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
L W +I H A+ LFS M D++L+PD +T +LL AC
Sbjct: 479 SLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYAC 525
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 163/515 (31%), Positives = 260/515 (50%), Gaps = 44/515 (8%)
Query: 107 MIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE 166
+I +N DA K+Y M + F S++KAC + S LG+++H V+K+
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
+ NALI MY++ + AR +F I KDV SW +MI ++ + G EAL
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214
Query: 227 EMLHHGAYQPNEFIFGSV----------------------------------------FS 246
+M H +P+E S+ +
Sbjct: 215 DM-HVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYV 273
Query: 247 ACSN--FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
C N +AR +F+ + + SW A+IA +N NE + LF +M + P+ +T+ S
Sbjct: 274 KCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLS 333
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
L+ C L G +H++ ++ GF ++ + A + MY KC + +A VF K+
Sbjct: 334 LVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSF-KSK 392
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
D + W+++I++ Q+N +E F +F M I+P+ T ++ CAK SLEM +H
Sbjct: 393 DLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIH 452
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
YI K G+ D+ + +D+Y CG + +A +LF + D+ W+++I G+A G G+
Sbjct: 453 SYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGE 512
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV 544
AL+LF M +LGV+PN +T +G L ACSH GL++EG L+ M +E+G P EH C+
Sbjct: 513 AALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCM 572
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
VDLL RAG + EA + I M +I V+ S LA+
Sbjct: 573 VDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAA 607
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 141/532 (26%), Positives = 236/532 (44%), Gaps = 50/532 (9%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
++S K N +A Y + + T+ + ++ AC + S LG++VH ++ +
Sbjct: 96 ITSYIKNNCPADAAKIYAYMRG-TDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
DV + N ++ MY + GSL AR+ FDK+ ++VVSW+ MI ++ ++A+ L
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH--GSHLIAQNALIAMYTK 183
M V P + SI + L + LG+ +HA+V+++ S + ALI MY K
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVK 274
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
+ + AR VF G+++ + SW +MIAA+ E + F +ML G + PNE S
Sbjct: 275 CENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMF-PNEITMLS 333
Query: 244 VFSACSNF----------------------------------------ARILFNEIDSPD 263
+ C AR +F+ S D
Sbjct: 334 LVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKD 393
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
L W+A+I+ A ++ +EA +F M + P+ T+ SLL C +L G +HS
Sbjct: 394 LMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHS 453
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
YI K G ++ + + + MYA C + A +F E + D WN++I+ H E
Sbjct: 454 YIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAE-ATDRDISMWNAMISGFAMHGHGE 512
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL-HCYITKTGLAFDVFVMNGL 442
LF M A + P+ ITF + AC+ L+ +L H + + G V +
Sbjct: 513 AALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCM 572
Query: 443 MDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILG---YAQFGCGDEALKLF 490
+D+ + G L A +L M P++ + S + + G+ A K F
Sbjct: 573 VDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQF 624
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 170/343 (49%), Gaps = 9/343 (2%)
Query: 241 FGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
F S CS + E S + A + LI ++ +A +++ MR + D
Sbjct: 66 FIKTSSNCSYRVPLAALESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNF 125
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
+ S+L AC + G +VH +++K GF +V VCNA++ MY++ L A L+F ++
Sbjct: 126 VIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKI 185
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
+N D VSW+++I + + +E L M ++KP I + A++A L++
Sbjct: 186 -ENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLG 244
Query: 421 TQLHCYITKTGL--AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
+H Y+ + G V + L+D+Y+KC +L AR++F+ + ++SW+++I Y
Sbjct: 245 KAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYI 304
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIP 536
+E ++LF +M G+ PN +T++ ++ C G +E G LH + + G
Sbjct: 305 HCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRN---GFTL 361
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + +D+ + G V A + D+++W ++++S
Sbjct: 362 SLVLATAFIDMYGKCGDVRSARSVFDSFK-SKDLMMWSAMISS 403
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 124/283 (43%), Gaps = 46/283 (16%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILL 63
+SS + N +EA +D + T IRP+ T L+ C+ SL++G+ +H +I
Sbjct: 401 ISSYAQNNCIDEA---FDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDK 457
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
+ D++L+ ++MY CG ++ A F + R++ W AMI+G + + A++L
Sbjct: 458 QGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALEL 517
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ +M GV P TF + ACS G + G++L H + E G +T
Sbjct: 518 FEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLF-HKMVHEFG------------FT- 563
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
V +G M+ + G EA +E++ +PN +FGS
Sbjct: 564 ----------------PKVEHYGCMVDLLGRAGLLDEA----HELIKSMPMRPNIAVFGS 603
Query: 244 VFSACSNFARILFNEIDS-------PDLASWNALIAGVASHSN 279
+AC I E + P + +N L++ + + +N
Sbjct: 604 FLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASAN 646
>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cucumis sativus]
Length = 804
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 177/604 (29%), Positives = 300/604 (49%), Gaps = 46/604 (7%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
Y EA+ Y + I+ T+ ++ ACS L +G++VH I+ S D V+
Sbjct: 80 YQEAISLYH-QMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNT 138
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
+L++YG+ G L+ AR F +MP R++VSW+++I+ +N + N+ + + M+ G P
Sbjct: 139 ALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTP 198
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
++++AC LG + L + H +++K + ++LI MY K + A VF
Sbjct: 199 DSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVF 258
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
+ + ++W +MI++++ GY EAL F M +PN + +C+N + +
Sbjct: 259 ENVTYRSTSTWTAMISSYNLGGYLKEALALFVSM-QKTEVEPNSVTMRIILRSCTNLSLL 317
Query: 255 -----------------------------------------LFNEIDSPDLASWNALIAG 273
+ +EI +A WN LI+
Sbjct: 318 REGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISV 377
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
A E + LF M+ + +PD ++ S L A L G+Q+H ++IK F
Sbjct: 378 YAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDE 437
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
V N+++ MY+KC + A ++F ++ + V+WNS+I+ Q+ + + LF M
Sbjct: 438 Y-VFNSLINMYSKCGYVDLAYMIFDQM-EPKGVVTWNSMISGLSQNGYSTKAISLFDLMY 495
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
+ + + F V+ AC+ + LE +H + G+ +F+ L+D+Y KCG L
Sbjct: 496 VTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQ 555
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
+A+++F+ M VVSWSSLI Y G E + LF++M G+ PN VT++ VL+ACS
Sbjct: 556 TAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACS 615
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
H G V+EG+ + M ++GI P REH C+VDLL+RAG + EA + I M +W
Sbjct: 616 HAGCVKEGMLFFNSMR-DFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIW 674
Query: 574 KSLL 577
+LL
Sbjct: 675 GALL 678
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 154/589 (26%), Positives = 269/589 (45%), Gaps = 61/589 (10%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y L A ++LR+L ++H HI+++ D + ++ Y + G L+ + F
Sbjct: 4 YMPLFKASTTLRTLA---QLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFH 60
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+ W ++ N +AI LY QML + +TF S+++ACSG G + +G++
Sbjct: 61 SPDSFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQR 120
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H +IKS + AL+++Y + + AR VF + +D+ SW S+I++ + G
Sbjct: 121 VHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGE 180
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------- 251
E L F M+ G P+ + +V AC
Sbjct: 181 INEGLDAFRCMVSEGG-TPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDS 239
Query: 252 --------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
A I+F + ++W A+I+ EA++LF M+ E+ P
Sbjct: 240 SLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEP 299
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP-VCNAILTMYAKCSV--LCNAL 354
+ +T+ +L +C L +G VH +IK D+N+ + +L +YA + LC +
Sbjct: 300 NSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKI 359
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
L E+G +V WN++I+ Q +E LF RM PD + + A
Sbjct: 360 L--HEIGGRGIAV-WNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNE 416
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
L++ Q+H ++ K D +V N L+++Y KCG + A +F+ ME VV+W+S+I
Sbjct: 417 GELQLGLQIHGHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMI 475
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
G +Q G +A+ LF M V V V+ ACSH+G +E+G ++ + I
Sbjct: 476 SGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKL-----I 530
Query: 535 IPTREHC----SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
C + +VD+ A+ G + A+ + M+ + +V W SL++S
Sbjct: 531 TCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMS-ERSVVSWSSLISS 578
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 223/477 (46%), Gaps = 43/477 (9%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++ AC L L+L + H +IL + D + + ++ MY KCGSL A + F+ + R+
Sbjct: 206 VVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRS 265
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+WTAMI+ + +A+ L++ M ++ V P T I+++C+ L + G+ +H
Sbjct: 266 TSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHC 325
Query: 161 HVIKSEHGSHL-IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
VIK++ ++L L+ +Y + + I + + W ++I+ +++ G
Sbjct: 326 VVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLK 385
Query: 220 EALCHFNEMLHHGAYQP----------------------------------NEFIFGSV- 244
E + F M G + P +E++F S+
Sbjct: 386 ETVDLFVRMQKQG-FMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDEYVFNSLI 444
Query: 245 --FSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
+S C + A ++F++++ + +WN++I+G++ + + +A+SLF M +
Sbjct: 445 NMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEV 504
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
S++ AC L +G +H +I G + + A++ MYAKC L A VF +
Sbjct: 505 AFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNM 564
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
+ + VSW+S+I++ H Q E+ LFS+ML S IKP+ +T +V+ AC+ ++
Sbjct: 565 SERS-VVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEG 623
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS-WSSLILG 476
+ G+ ++D+ + G L A ++ M P S W +L+ G
Sbjct: 624 MLFFNSMRDFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNG 680
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 174/409 (42%), Gaps = 44/409 (10%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV-VLQN 74
EAL + S T + T ++ +C++L L+ G+ VH ++ + ++ L
Sbjct: 283 KEALALF-VSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGP 341
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
+L +Y + ++ R + W +I+ +Q + + L+++M + G MP
Sbjct: 342 TLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMP 401
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
F+ S + A G + LG Q+H HVIK + N+LI MY+K + A +F
Sbjct: 402 DSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDEYVF-NSLINMYSKCGYVDLAYMIF 460
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--- 251
+ K V +W SMI+ S+ GY +A+ F ++++ + E F SV ACS+
Sbjct: 461 DQMEPKGVVTWNSMISGLSQNGYSTKAISLF-DLMYVTCPEIGEVAFVSVIQACSHLGFL 519
Query: 252 -------------------------------------ARILFNEIDSPDLASWNALIAGV 274
A+ +F+ + + SW++LI+
Sbjct: 520 EKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSY 579
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
H +E + LFS+M + + P+ +TV ++L AC + +GM + + G +
Sbjct: 580 GVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSMRDFGIEPKR 639
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
I+ + ++ L A + K + + W +++ C H + +
Sbjct: 640 EHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMD 688
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 1/153 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S L + +A+ +D T I + +I ACS L L+ G+ +H ++
Sbjct: 472 NSMISGLSQNGYSTKAISLFDL-MYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLI 530
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + ++ +++MY KCG L+ A+ FD M +R+VVSW+++I+ + Q ++ I
Sbjct: 531 TCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIF 590
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
L+ +ML+SG+ P T +++ ACS G V G
Sbjct: 591 LFSKMLESGIKPNDVTVMNVLSACSHAGCVKEG 623
>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
Length = 1017
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 168/586 (28%), Positives = 298/586 (50%), Gaps = 45/586 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S++ L+ AC+ LR ++ G ++H ++ + N +++MY K L AR FD
Sbjct: 146 SSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 205
Query: 96 MPQR-NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
++ + V W ++++ S + + + ++L+ +M +G P +T S + AC G L
Sbjct: 206 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL 265
Query: 155 GRQLHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
G+++HA V+KS H S L NALIAMYT+ ++ A + + DV +W S+I +
Sbjct: 266 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 325
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL------------------ 255
+ EAL F++M+ G ++ +E S+ +A + +L
Sbjct: 326 QNLMYKEALEFFSDMIAAG-HKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 384
Query: 256 ----------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
F + DL SW +IAG A + EA+ LF ++ +
Sbjct: 385 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 444
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ D + + S+L A ++ ++H +I++ G V + N ++ +Y KC + A
Sbjct: 445 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYA 503
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
VF+ + K D VSW S+I++ + E LF RM+ + + D + ++ A A
Sbjct: 504 TRVFESI-KGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 562
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+++L ++HCY+ + G + + ++D+Y CG L SA+ +F+ +E ++ ++S+
Sbjct: 563 LSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSM 622
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I Y GCG A++LF +MR VSP+ ++ + +L ACSH GL++EG +IME+EY
Sbjct: 623 INAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYE 682
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ P EH C+VD+L RA CV EA +F+ M + VW +LLA+
Sbjct: 683 LEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAA 728
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 143/475 (30%), Positives = 242/475 (50%), Gaps = 48/475 (10%)
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
++L + GK ++ ++ FD+MP R +W MI N + A+ LY M GV
Sbjct: 85 YVLELCGKRRAVSQEKV-FDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 143
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
G +F +++KAC+ L + G +LH+ ++K + S NAL++MY K D + AR +F
Sbjct: 144 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 203
Query: 195 SGIARK-DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-- 251
G K D W S+++++S G LE L F EM H PN + S +AC F
Sbjct: 204 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREM-HMTGPAPNSYTIVSALTACDGFSY 262
Query: 252 ---------------------------------------ARILFNEIDSPDLASWNALIA 272
A + ++++ D+ +WN+LI
Sbjct: 263 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 322
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT-LYQGMQVHSYIIKMGFD 331
G + EA+ FS+M D +++ S++ A GRL+ L GM++H+Y+IK G+D
Sbjct: 323 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAAS-GRLSNLLAGMELHAYVIKHGWD 381
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
SN+ V N ++ MY+KC++ C F + + D +SW ++IA Q++ E LF
Sbjct: 382 SNLQVGNTLIDMYSKCNLTCYMGRAFLRM-HDKDLISWTTVIAGYAQNDCHVEALELFRD 440
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
+ +++ D + ++ A + + S+ +V ++HC+I + GL D + N L+D+Y KC +
Sbjct: 441 VAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRN 499
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
+G A ++F ++ DVVSW+S+I A G EA++LF RM G+S + V L+
Sbjct: 500 MGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALL 554
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 167/329 (50%), Gaps = 11/329 (3%)
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT-VHSLLCACIGRL 313
+F+E+ +WN +I S+ A++L+ MR E +P GL+ +LL AC
Sbjct: 101 VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMR-VEGVPLGLSSFPALLKACAKLR 159
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
+ G ++HS ++K+G+ S + NA+++MYAK L A +F + D+V WNSI+
Sbjct: 160 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 219
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL- 432
++ ++ E LF M + P+ T + AC + ++ ++H + K+
Sbjct: 220 SSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 279
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
+ +++V N L+ +Y +CG + A ++ M N DVV+W+SLI GY Q EAL+ F+
Sbjct: 280 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 339
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLAR 550
M + G + V++ ++ A + + G LH Y I ++G + + ++D+ ++
Sbjct: 340 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI---KHGWDSNLQVGNTLIDMYSK 396
Query: 551 AGCV-HEAEDFINQMACDADIVVWKSLLA 578
+ F+ D D++ W +++A
Sbjct: 397 CNLTCYMGRAFLRMH--DKDLISWTTVIA 423
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 194/441 (43%), Gaps = 61/441 (13%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
+I+A L +L G ++H +++ ++ + N +++MY KC F +M ++
Sbjct: 355 IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKD 414
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
++SWT +IAG +QN +A++L+ + + + + GSI++A S L S+ + +++H
Sbjct: 415 LISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 474
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
H+++ +I QN L+ +Y K + A VF I KDV SW SMI++ + G E E
Sbjct: 475 HILRKGLLDTVI-QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 533
Query: 221 ALCHFNEMLHHGAYQPNEFIF------------------------------GSV------ 244
A+ F M+ G + + GS+
Sbjct: 534 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVD 593
Query: 245 -FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
++ C + A+ +F+ I+ L + ++I H A+ LF +MR + PD ++
Sbjct: 594 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS 653
Query: 302 VHSLLCACIGRLTLYQG-----MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
+LL AC L +G + H Y ++ + V ++ M + + + A
Sbjct: 654 FLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV----CLVDMLGRANCVVEAFEF 709
Query: 357 FKELGKNADSVSWNSIIAACLQHNQ-------AEELFRLFSR-----MLASQIKPDHITF 404
K + + W +++AAC H++ A+ L L + +L S + + +
Sbjct: 710 VKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRW 769
Query: 405 NDVMGACAKMASLEMVTQLHC 425
NDV AKM + M C
Sbjct: 770 NDVEKVRAKMKASGMEKHPGC 790
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
S K+F+ M + +W+++I Y G AL L+ MR GV L + +L AC+
Sbjct: 97 SQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACA 156
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
+ + G L+ ++ + G T + +V + A+ + A + D V+W
Sbjct: 157 KLRDIRSGSELHSLLV-KLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLW 215
Query: 574 KSLLAS 579
S+L+S
Sbjct: 216 NSILSS 221
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 168/586 (28%), Positives = 298/586 (50%), Gaps = 45/586 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S++ L+ AC+ LR ++ G ++H ++ + N +++MY K L AR FD
Sbjct: 183 SSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 242
Query: 96 MPQR-NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
++ + V W ++++ S + + + ++L+ +M +G P +T S + AC G L
Sbjct: 243 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL 302
Query: 155 GRQLHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
G+++HA V+KS H S L NALIAMYT+ ++ A + + DV +W S+I +
Sbjct: 303 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 362
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL------------------ 255
+ EAL F++M+ G ++ +E S+ +A + +L
Sbjct: 363 QNLMYKEALEFFSDMIAAG-HKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 256 ----------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
F + DL SW +IAG A + EA+ LF ++ +
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ D + + S+L A ++ ++H +I++ G V + N ++ +Y KC + A
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYA 540
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
VF+ + K D VSW S+I++ + E LF RM+ + + D + ++ A A
Sbjct: 541 TRVFESI-KGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 599
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+++L ++HCY+ + G + + ++D+Y CG L SA+ +F+ +E ++ ++S+
Sbjct: 600 LSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSM 659
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I Y GCG A++LF +MR VSP+ ++ + +L ACSH GL++EG +IME+EY
Sbjct: 660 INAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYE 719
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ P EH C+VD+L RA CV EA +F+ M + VW +LLA+
Sbjct: 720 LEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAA 765
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 167/543 (30%), Positives = 273/543 (50%), Gaps = 56/543 (10%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
C + EA D S+NN+ + +A ++ C R++ GR++H I K P
Sbjct: 59 CFDGVLTEAFQRLDVSENNSPV----EAFAYVLELCGKRRAVSQGRQLHSRIF--KTFPS 112
Query: 70 V---VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
L ++ MYGKCGSL+DA FD+MP R +W MI N + A+ LY
Sbjct: 113 FELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWN 172
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M GV G +F +++KAC+ L + G +LH+ ++K + S NAL++MY K D
Sbjct: 173 MRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDD 232
Query: 187 ILDARNVFSGIARK-DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ AR +F G K D W S+++++S G LE L F EM H PN + S
Sbjct: 233 LSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREM-HMTGPAPNSYTIVSAL 291
Query: 246 SACSNF-----------------------------------------ARILFNEIDSPDL 264
+AC F A + ++++ D+
Sbjct: 292 TACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADV 351
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT-LYQGMQVHS 323
+WN+LI G + EA+ FS+M D +++ S++ A GRL+ L GM++H+
Sbjct: 352 VTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAAS-GRLSNLLAGMELHA 410
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
Y+IK G+DSN+ V N ++ MY+KC++ C F + + D +SW ++IA Q++
Sbjct: 411 YVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM-HDKDLISWTTVIAGYAQNDCHV 469
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
E LF + +++ D + ++ A + + S+ +V ++HC+I + GL D + N L+
Sbjct: 470 EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELV 528
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
D+Y KC ++G A ++F ++ DVVSW+S+I A G EA++LF RM G+S + V
Sbjct: 529 DVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSV 588
Query: 504 TLV 506
L+
Sbjct: 589 ALL 591
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 174/345 (50%), Gaps = 13/345 (3%)
Query: 239 FIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
F++G S + A +F+E+ +WN +I S+ A++L+ MR E +P
Sbjct: 124 FMYGKCGSL--DDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMR-VEGVPL 180
Query: 299 GLT-VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
GL+ +LL AC + G ++HS ++K+G+ S + NA+++MYAK L A +F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+ D+V WNSI+++ ++ E LF M + P+ T + AC +
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 418 EMVTQLHCYITKTGL-AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
++ ++H + K+ + +++V N L+ +Y +CG + A ++ M N DVV+W+SLI G
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGI 534
Y Q EAL+ F+ M + G + V++ ++ A + + G LH Y I ++G
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI---KHGW 417
Query: 535 IPTREHCSCVVDLLARAGCV-HEAEDFINQMACDADIVVWKSLLA 578
+ + ++D+ ++ + F+ D D++ W +++A
Sbjct: 418 DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH--DKDLISWTTVIA 460
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 138/278 (49%), Gaps = 18/278 (6%)
Query: 309 CIGRLTLYQGMQVHSYIIKM--GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
C R + QG Q+HS I K F+ + + ++ MY KC L +A VF E+ + +
Sbjct: 90 CGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVFDEM-PDRTA 147
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
+WN++I A + + + L+ M + +F ++ ACAK+ + ++LH
Sbjct: 148 FAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSL 207
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN-FMENPDVVSWSSLILGYAQFGCGDE 485
+ K G F++N L+ +Y K L +AR+LF+ F E D V W+S++ Y+ G E
Sbjct: 208 LVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLE 267
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH----- 540
L+LF M G +PN T+V LTAC + G ++ ++ + H
Sbjct: 268 TLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH------ASVLKSSTHSSELY 321
Query: 541 -CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
C+ ++ + R G + +AE + QM +AD+V W SL+
Sbjct: 322 VCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 194/441 (43%), Gaps = 61/441 (13%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
+I+A L +L G ++H +++ ++ + N +++MY KC F +M ++
Sbjct: 392 IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKD 451
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
++SWT +IAG +QN +A++L+ + + + + GSI++A S L S+ + +++H
Sbjct: 452 LISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
H+++ +I QN L+ +Y K + A VF I KDV SW SMI++ + G E E
Sbjct: 512 HILRKGLLDTVI-QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570
Query: 221 ALCHFNEMLHHGAYQPNEFIF------------------------------GSV------ 244
A+ F M+ G + + GS+
Sbjct: 571 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVD 630
Query: 245 -FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
++ C + A+ +F+ I+ L + ++I H A+ LF +MR + PD ++
Sbjct: 631 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS 690
Query: 302 VHSLLCACIGRLTLYQG-----MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
+LL AC L +G + H Y ++ + V ++ M + + + A
Sbjct: 691 FLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV----CLVDMLGRANCVVEAFEF 746
Query: 357 FKELGKNADSVSWNSIIAACLQHNQ-------AEELFRLFSR-----MLASQIKPDHITF 404
K + + W +++AAC H++ A+ L L + +L S + + +
Sbjct: 747 VKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRW 806
Query: 405 NDVMGACAKMASLEMVTQLHC 425
NDV AKM + M C
Sbjct: 807 NDVEKVRAKMKASGMEKHPGC 827
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 2/196 (1%)
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV-FVMNGLM 443
L F R+ S+ F V+ C K ++ QLH I KT +F++ F+ L+
Sbjct: 64 LTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLV 123
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
+Y KCGSL A K+F+ M + +W+++I Y G AL L+ MR GV L
Sbjct: 124 FMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLS 183
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
+ +L AC+ + + G L+ ++ + G T + +V + A+ + A +
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLV-KLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 242
Query: 564 MACDADIVVWKSLLAS 579
D V+W S+L+S
Sbjct: 243 FQEKGDAVLWNSILSS 258
>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 748
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 178/598 (29%), Positives = 296/598 (49%), Gaps = 50/598 (8%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
N + Y L + S+ LG+ H H++ S P + L N++LNMY KC L A
Sbjct: 42 NTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFA 101
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD+MP+RN++S+ ++I+G +Q A++L+++ ++ + +FT+ + C
Sbjct: 102 RQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGER 161
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
+ LG LH V+ + + N LI MY+K ++ A ++F +D SW S+I
Sbjct: 162 CDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLI 221
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--------------------- 248
+ + ++G E L +M H + GSV AC
Sbjct: 222 SGYVRVGAAEEPLNLLAKM-HRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAK 280
Query: 249 --------------SNFAR--------ILFNEIDSPDLASWNALIAGV-----ASHSNAN 281
+A+ LF+ + S ++ ++NA+I+G + ++
Sbjct: 281 LGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASS 340
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
EA LF +M+ R L P T +L AC TL G Q+H+ I K F S+ + +A++
Sbjct: 341 EAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALI 400
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+YA + + F K D SW S+I +Q+ Q E F LF ++ +S I+P+
Sbjct: 401 ELYALMGSTEDGMQCFASTSKQ-DIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEE 459
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
T + +M ACA A+L Q+ Y K+G+ V + +Y K G++ A ++F
Sbjct: 460 YTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIE 519
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
++NPDV ++S++I AQ G +EAL +F M++ G+ PN +GVL AC H GLV +G
Sbjct: 520 VQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQG 579
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
L ++ M+N+Y I P +H +C+VDLL R G + +AE+ I V W++LL+S
Sbjct: 580 LKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSS 637
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 107/212 (50%), Gaps = 9/212 (4%)
Query: 7 SSLCKQNLYNEAL-VAYDFSQNNTNIRIRPSTY--AGLISACSSLRSLQLGRKVHDHILL 63
+S+ ++ NE L A+D + + IRP Y + ++SAC+ +L G ++ + +
Sbjct: 428 TSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIK 487
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
S ++ ++MY K G++ A F ++ +V +++AMI+ +Q+ N+A+ +
Sbjct: 488 SGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNI 547
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMY 181
+ M G+ P Q F ++ AC G V G + + +K+++ + ++ L+ +
Sbjct: 548 FESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLK-YFQCMKNDYRINPNEKHFTCLVDLL 606
Query: 182 TKFDRILDARNVF--SGIARKDVTSWGSMIAA 211
+ R+ DA N+ SG VT W +++++
Sbjct: 607 GRTGRLSDAENLILSSGFQDHPVT-WRALLSS 637
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/546 (31%), Positives = 269/546 (49%), Gaps = 42/546 (7%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N +++ Y K +L AR F+ M RN VSWT MI G SQN Q +A LY +M +SGV
Sbjct: 81 NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVK 140
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P TF +++ ++ Q+H+H+I+ + LI N+L+ Y K + A +
Sbjct: 141 PDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQL 200
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS---------- 243
FS + KD S+ MI ++K G+ EAL F +M + +QP+ F F +
Sbjct: 201 FSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMD-FQPSGFTFAAMLGMSVGSED 259
Query: 244 -------------------VFSACS-----------NFARILFNEIDSPDLASWNALIAG 273
+F A + + A+ LF+E+ D S+N +I G
Sbjct: 260 VIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITG 319
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
A + ++ LF ++ ++L L L G Q H+ + S
Sbjct: 320 YAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSE 379
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
V V NA++ MYAKC +A +F L +SV W +II+ +Q EE ++F M
Sbjct: 380 VQVGNALVDMYAKCEKFEDANRIFANLAYR-NSVPWTAIISIYVQKGFHEEALKMFKEMN 438
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
+ D TF + A A +AS+ + QLH + + GL VF + L+D+Y CGS+
Sbjct: 439 RENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMK 498
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
A ++F M + ++V W++LI Y+Q G + F M G+ P+ V+ + VLTACS
Sbjct: 499 DAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACS 558
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
H GLVE+ L + M Y + P R+H + ++D+L R+G +EAE+ I++M + D V+W
Sbjct: 559 HRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMW 618
Query: 574 KSLLAS 579
S+L S
Sbjct: 619 SSVLNS 624
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 221/492 (44%), Gaps = 58/492 (11%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++P T+A L+S +L+ ++H HI+ +++ N +++ Y K L+ A
Sbjct: 139 VKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIAS 198
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F +MP ++ VS+ MI G ++ +A+KL++QM P FTF +++ G
Sbjct: 199 QLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSE 258
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
V G+Q+H IK+ + + NAL+ Y+K D I A+N+F + D S+ +I
Sbjct: 259 DVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIIT 318
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS--------------------------- 243
++ G + E + L ++ F F +
Sbjct: 319 GYAWNG-QYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAV 377
Query: 244 -----------VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+++ C F A +F + + W A+I+ EA+ +F EM
Sbjct: 378 SEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEM 437
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ D T S L A ++ G Q+HS +I++G S+V + ++ MYA C +
Sbjct: 438 NRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSM 497
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
+A+ VFKE+ + + V WN++I+A Q+ AE F F+ M+ S + PD ++F V+ A
Sbjct: 498 KDAIEVFKEM-PDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTA 556
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMN-------GLMDIYIKCGSLGSARKLFNFME 463
C+ +E +T+ V+ ++ ++D+ + G A L + M
Sbjct: 557 CSHRGLVEKALWYFNSMTQ------VYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMP 610
Query: 464 -NPDVVSWSSLI 474
PD V WSS++
Sbjct: 611 FEPDEVMWSSVL 622
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 138/270 (51%), Gaps = 1/270 (0%)
Query: 225 FNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
F+EM + N + G V S AR LF + S + SW +I G + ++ EA
Sbjct: 69 FDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAF 128
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
+L++EM + PD +T +LL TL + +Q+HS+II+ GF +++ V N+++ Y
Sbjct: 129 NLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSY 188
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
K L A +F E+ DSVS+N +I ++ EE +LF +M +P TF
Sbjct: 189 CKTCCLDIASQLFSEM-PTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTF 247
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
++G + Q+H KT +D+FV N L+D Y K + A+ LF+ M
Sbjct: 248 AAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPE 307
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
D VS++ +I GYA G +++ LF R++
Sbjct: 308 LDGVSYNIIITGYAWNGQYEKSFDLFKRLQ 337
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 174/388 (44%), Gaps = 29/388 (7%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+A ++S + +L +GR+ H +++ +V + N +++MY KC EDA F +
Sbjct: 348 FATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLA 407
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
RN V WTA+I+ Q +A+K++ +M + V Q TF S +KA + L SV LG+Q
Sbjct: 408 YRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQ 467
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
LH+ VI+ S + + + L+ MY + DA VF + +++ W ++I+A+S+ G
Sbjct: 468 LHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGD 527
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEID-----SPDLASW 267
F +M+ G Y P+ F SV +ACS+ + FN + P +
Sbjct: 528 AEATFSSFADMIESGLY-PDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHY 586
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
+I + NEA +L SEM PD + S+L +C + + K
Sbjct: 587 ATMIDVLCRSGRFNEAENLISEM---PFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFK 643
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLV---FKELG-KNADSVSWNSI-------IAAC 376
M + + +YA+ NA V +E G K + SW I A
Sbjct: 644 MDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTAND 703
Query: 377 LQHNQAEELFR----LFSRMLASQIKPD 400
H Q E++ R L M KPD
Sbjct: 704 RTHPQTEQIRRKINSLVELMDKEGYKPD 731
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 182/409 (44%), Gaps = 51/409 (12%)
Query: 30 NIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
N+ +PS T+A ++ + G+++H + + D+ + N +L+ Y K ++
Sbjct: 237 NMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYID 296
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
A+ FD+MP+ + VS+ +I G + N Q + L+ ++ + F F +++ +
Sbjct: 297 LAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAA 356
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
++ +GRQ HA + + S + NAL+ MY K ++ DA +F+ +A ++ W +
Sbjct: 357 IELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTA 416
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------- 254
+I+ + + G+ EAL F EM + ++ F S A +N A +
Sbjct: 417 IISIYVQKGFHEEALKMFKEMNRENVH-GDQATFASTLKASANLASVSLGKQLHSSVIRL 475
Query: 255 ---------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
+F E+ ++ WNALI+ + + +A S F
Sbjct: 476 GLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSF 535
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAK 346
++M + L PD ++ S+L AC R + + + + + ++ D ++ + +
Sbjct: 536 ADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCR 595
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQH-NQ------AEELFRL 388
A + E+ D V W+S++ +C H NQ A++LF++
Sbjct: 596 SGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKM 644
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 97/177 (54%), Gaps = 1/177 (0%)
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N N +++ Y K L A +F+ + + VSW +I Q+NQ +E F L++ M
Sbjct: 76 NTSSVNMMVSGYVKSRNLFRARELFESMFSR-NEVSWTIMIGGYSQNNQPKEAFNLYTEM 134
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
S +KPDHITF ++ +L+ V Q+H +I + G + + V N L+D Y K L
Sbjct: 135 CRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCL 194
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
A +LF+ M D VS++ +I GY ++G +EALKLF +MR++ P+ T +L
Sbjct: 195 DIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAML 251
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%)
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
+N ++ Y+K +L AR+LF M + + VSW+ +I GY+Q EA L+T M GV
Sbjct: 80 VNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGV 139
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLY 525
P+ +T +L+ ++E L ++
Sbjct: 140 KPDHITFATLLSGFDDTTTLKEVLQIH 166
>gi|302773067|ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
gi|300162462|gb|EFJ29075.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
Length = 789
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 177/561 (31%), Positives = 281/561 (50%), Gaps = 54/561 (9%)
Query: 50 SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIA 109
SL GRK+H ++ S + L NH+L+MY + S DA + D+MP+RN VSW A+I
Sbjct: 27 SLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNAVSWNAVIR 86
Query: 110 GCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGS 169
+Q ++ + +MLQ G +P F S+IKA G++ G + KS
Sbjct: 87 ANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKAP---GTIQEGEIVQDFAKKSGFDR 143
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
+ ALI MY + R+ A++ F I + V SW ++I +S+ + ++L F EML
Sbjct: 144 SFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREML 203
Query: 230 HHGAYQPNEFIF-----------------GSVFSACS----------------------- 249
G PN G++ ACS
Sbjct: 204 LQG-IAPNAVTIICIASAVAGIAAKITTCGNLIHACSIDSGLISVTTVANSIINLFGRGG 262
Query: 250 NFARI--LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC 307
N +R +F ++D D+ SWN +IA A + + EA+ L+ M R PDG+T ++L
Sbjct: 263 NISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRMTIR---PDGVTFVNVLE 319
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
AC L +G +H G+DS++ V A+++MY +C L A VF + ++ +
Sbjct: 320 ACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAI-QHPGVI 378
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ-LHCY 426
+ N+IIAA Q +A+ F +ML I+P T V+GACA + + LH +
Sbjct: 379 TLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRW 438
Query: 427 ITKTG---LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
+ + D+ V N L+++Y KCG L +AR +F+ +V +W++++ GYAQ G
Sbjct: 439 MAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYA 498
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
D A++L M+ G+SP+ ++ L+A SH VE+G ++ + +YG+IP+ EH
Sbjct: 499 DMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGA 558
Query: 544 VVDLLARAGCVHEAEDFINQM 564
VVDLL RAG + EAE F+ M
Sbjct: 559 VVDLLGRAGWLEEAEGFLRSM 579
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 168/377 (44%), Gaps = 51/377 (13%)
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
+ N I+N++G+ G++ A F+K+ QR+V SW MIA ++N +A+ LY +M
Sbjct: 248 TTVANSIINLFGRGGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRMT- 306
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD 189
+ P TF ++++AC + G +H + S LI AL++MY + R+
Sbjct: 307 --IRPDGVTFVNVLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDR 364
Query: 190 ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV----- 244
A VF+ I V + ++IAA ++ G +L HF +ML G +P++F +V
Sbjct: 365 AAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLG-IRPSKFTLVAVLGACA 423
Query: 245 -------------------------------------FSACSNF--ARILFNEIDSPDLA 265
++ C + AR +F+ +++
Sbjct: 424 TSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVS 483
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
+WNA++AG A H A+ A+ L EM+ + PD ++ + L A + G ++ I
Sbjct: 484 TWNAIMAGYAQHGYADMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAI 543
Query: 326 IK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
+ G +V A++ + + L A + + AD+ +W +++ AC H +
Sbjct: 544 SRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDR 603
Query: 385 LFRLFSRMLASQIKPDH 401
R ++A I P H
Sbjct: 604 AMRAAEAIVA--IDPSH 618
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 123/258 (47%), Gaps = 13/258 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N +++ K EAL Y + IRP T+ ++ AC L+ G +H
Sbjct: 283 NTMIAAFAKNGHVFEALDLY------GRMTIRPDGVTFVNVLEACDCPDDLERGESIHRD 336
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
D+++ +++MY +CG L+ A F + V++ A+IA +Q + + +
Sbjct: 337 ARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAAHAQFGRADGS 396
Query: 121 IKLYIQMLQSGVMPGQFTFGSII-KACSGLGSVCLGRQLHAHVIK--SEHGSH-LIAQNA 176
+ + QMLQ G+ P +FT +++ + + GR LH + + + H ++ +NA
Sbjct: 397 LLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNA 456
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
L+ MY K + AR +F + +V++W +++A +++ GY A+ EM G P
Sbjct: 457 LVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYADMAVRLLYEMQLAG-ISP 515
Query: 237 NEFIFGSVFSACSNFARI 254
+ F + SA S+ ++
Sbjct: 516 DPISFTAALSASSHARQV 533
>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g69350, mitochondrial-like
[Cucumis sativus]
Length = 804
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 177/604 (29%), Positives = 300/604 (49%), Gaps = 46/604 (7%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
Y EA+ Y + I+ T+ ++ ACS L +G++VH I+ S D V+
Sbjct: 80 YQEAISLYH-QMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNT 138
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
+L++YG+ G L+ AR F +MP R++VSW+++I+ +N + N+ + + M+ G P
Sbjct: 139 ALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTP 198
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
++++AC LG + L + H +++K + ++LI MY K + A VF
Sbjct: 199 DSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVF 258
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
+ + ++W +MI++++ GY EAL F M +PN + +C+N + +
Sbjct: 259 ENVTYRSTSTWTAMISSYNLGGYLKEALALFVSM-QKTEVEPNSVTMRIILRSCTNLSLL 317
Query: 255 -----------------------------------------LFNEIDSPDLASWNALIAG 273
+ +EI +A WN LI+
Sbjct: 318 REGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISV 377
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
A E + LF M+ + +PD ++ S L A L G+Q+H ++IK F
Sbjct: 378 YAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDE 437
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
V N+++ MY+KC + A ++F ++ + V+WNS+I+ Q+ + + LF M
Sbjct: 438 Y-VFNSLINMYSKCGYVDLAYMIFDQM-EPKGVVTWNSMISGLSQNGYSTKAISLFDLMY 495
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
+ + + F V+ AC+ + LE +H + G+ +F+ L+D+Y KCG L
Sbjct: 496 VTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQ 555
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
+A+++F+ M VVSWSSLI Y G E + LF++M G+ PN VT++ VL+ACS
Sbjct: 556 TAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACS 615
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
H G V+EG+ + M ++GI P REH C+VDLL+RAG + EA + I M +W
Sbjct: 616 HAGCVKEGMLFFNSMR-DFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIW 674
Query: 574 KSLL 577
+LL
Sbjct: 675 GALL 678
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 154/589 (26%), Positives = 268/589 (45%), Gaps = 61/589 (10%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y L A ++LR L ++H HI+++ D + ++ Y + G L+ + F
Sbjct: 4 YMPLFKASTTLRQLA---QLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFH 60
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+ W ++ N +AI LY QML + +TF S+++ACSG G + +G++
Sbjct: 61 SPDSFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQR 120
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H +IKS + AL+++Y + + AR VF + +D+ SW S+I++ + G
Sbjct: 121 VHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGE 180
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------- 251
E L F M+ G P+ + +V AC
Sbjct: 181 INEGLDAFRCMVSEGG-TPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDS 239
Query: 252 --------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
A I+F + ++W A+I+ EA++LF M+ E+ P
Sbjct: 240 SLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEP 299
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP-VCNAILTMYAKCSV--LCNAL 354
+ +T+ +L +C L +G VH +IK D+N+ + +L +YA + LC +
Sbjct: 300 NSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKI 359
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
L E+G +V WN++I+ Q +E LF RM PD + + A
Sbjct: 360 L--HEIGGRGIAV-WNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNE 416
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
L++ Q+H ++ K D +V N L+++Y KCG + A +F+ ME VV+W+S+I
Sbjct: 417 GELQLGLQIHGHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMI 475
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
G +Q G +A+ LF M V V V+ ACSH+G +E+G ++ + I
Sbjct: 476 SGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKL-----I 530
Query: 535 IPTREHC----SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
C + +VD+ A+ G + A+ + M+ + +V W SL++S
Sbjct: 531 TCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMS-ERSVVSWSSLISS 578
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 223/477 (46%), Gaps = 43/477 (9%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++ AC L L+L + H +IL + D + + ++ MY KCGSL A + F+ + R+
Sbjct: 206 VVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRS 265
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+WTAMI+ + +A+ L++ M ++ V P T I+++C+ L + G+ +H
Sbjct: 266 TSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHC 325
Query: 161 HVIKSEHGSHL-IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
VIK++ ++L L+ +Y + + I + + W ++I+ +++ G
Sbjct: 326 VVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLK 385
Query: 220 EALCHFNEMLHHGAYQP----------------------------------NEFIFGSV- 244
E + F M G + P +E++F S+
Sbjct: 386 ETVDLFVRMQKQG-FMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDEYVFNSLI 444
Query: 245 --FSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
+S C + A ++F++++ + +WN++I+G++ + + +A+SLF M +
Sbjct: 445 NMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEV 504
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
S++ AC L +G +H +I G + + A++ MYAKC L A VF +
Sbjct: 505 AFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNM 564
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
+ + VSW+S+I++ H Q E+ LFS+ML S IKP+ +T +V+ AC+ ++
Sbjct: 565 SERS-VVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEG 623
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS-WSSLILG 476
+ G+ ++D+ + G L A ++ M P S W +L+ G
Sbjct: 624 MLFFNSMRDFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNG 680
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 174/409 (42%), Gaps = 44/409 (10%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV-VLQN 74
EAL + S T + T ++ +C++L L+ G+ VH ++ + ++ L
Sbjct: 283 KEALALF-VSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGP 341
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
+L +Y + ++ R + W +I+ +Q + + L+++M + G MP
Sbjct: 342 TLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMP 401
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
F+ S + A G + LG Q+H HVIK + N+LI MY+K + A +F
Sbjct: 402 DSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDEYVF-NSLINMYSKCGYVDLAYMIF 460
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--- 251
+ K V +W SMI+ S+ GY +A+ F ++++ + E F SV ACS+
Sbjct: 461 DQMEPKGVVTWNSMISGLSQNGYSTKAISLF-DLMYVTCPEIGEVAFVSVIQACSHLGFL 519
Query: 252 -------------------------------------ARILFNEIDSPDLASWNALIAGV 274
A+ +F+ + + SW++LI+
Sbjct: 520 EKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSY 579
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
H +E + LFS+M + + P+ +TV ++L AC + +GM + + G +
Sbjct: 580 GVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSMRDFGIEPKR 639
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
I+ + ++ L A + K + + W +++ C H + +
Sbjct: 640 EHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMD 688
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 1/153 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S L + +A+ +D T I + +I ACS L L+ G+ +H ++
Sbjct: 472 NSMISGLSQNGYSTKAISLFDL-MYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLI 530
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + ++ +++MY KCG L+ A+ FD M +R+VVSW+++I+ + Q ++ I
Sbjct: 531 TCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIF 590
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
L+ +ML+SG+ P T +++ ACS G V G
Sbjct: 591 LFSKMLESGIKPNDVTVMNVLSACSHAGCVKEG 623
>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 282/542 (52%), Gaps = 34/542 (6%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+ AC+ +SL G+++H ++ + +L + ++N Y L DA+ + +
Sbjct: 87 LLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTLD 146
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+ W +I+ +N +A+ +Y ML + P ++T+ S++KAC G ++H
Sbjct: 147 PLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHR 206
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+ S L NAL++MY +F ++ AR++F + R+D SW ++I+ ++ G E
Sbjct: 207 SIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKE 266
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNA 280
A F M G + N I WN + G N
Sbjct: 267 AFQLFGSMQEEGV-EMNVII--------------------------WNTIAGGCLHSGNF 299
Query: 281 NEAMSLFSEMRDR-ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
A+ L S+MR L + V C+ IG + L G ++H + ++ FD V NA
Sbjct: 300 RGALQLISQMRTSIHLDAIAMVVGLNACSHIGAIKL--GKEIHGHAVRTCFDVFDNVKNA 357
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
++TMY++C L +A ++F + ++WN++++ ++ EE+ LF ML ++P
Sbjct: 358 LITMYSRCRDLGHAFILFHRT-EEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEP 416
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM--NGLMDIYIKCGSLGSARK 457
+++T V+ CA++A+L+ + HCYI K F+ +++ N L+D+Y + G + ARK
Sbjct: 417 NYVTIASVLPLCARIANLQHGKEFHCYIMKHK-QFEEYLLLWNALVDMYSRSGRVLEARK 475
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
+F+ + D V+++S+ILGY G G+ LKLF M L + P+ VT+V VLTACSH GL
Sbjct: 476 VFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGL 535
Query: 518 VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
V +G L++ M + +GI+P EH +C+ DL RAG +++A++FI M +W +LL
Sbjct: 536 VAQGQVLFKRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYKPTSAMWATLL 595
Query: 578 AS 579
+
Sbjct: 596 GA 597
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/509 (21%), Positives = 202/509 (39%), Gaps = 85/509 (16%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N +S+ + + EAL Y +N N +I P TY ++ AC G +VH
Sbjct: 151 NLLISAYVRNGFFVEALCVY---KNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHRS 207
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
I S + + + N +++MYG+ G LE AR FD MP+R+ VSW +I+ + +A
Sbjct: 208 IEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEA 267
Query: 121 IKLYIQMLQSGVMPGQFTFGSI----------------------------------IKAC 146
+L+ M + GV + +I + AC
Sbjct: 268 FQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIAMVVGLNAC 327
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
S +G++ LG+++H H +++ +NALI MY++ + A +F K + +W
Sbjct: 328 SHIGAIKLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHAFILFHRTEEKGLITWN 387
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------- 251
+M++ ++ + E F EML G +PN SV C+
Sbjct: 388 AMLSGYAHMDRYEEVTFLFREMLQEGM-EPNYVTIASVLPLCARIANLQHGKEFHCYIMK 446
Query: 252 --------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
AR +F+ + D ++ ++I G +
Sbjct: 447 HKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLK 506
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMY 344
LF EM E+ PD +T+ ++L AC + QG + +I + G + + ++
Sbjct: 507 LFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLF 566
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
+ +L A + S W +++ AC H E ++L ++KPDH +
Sbjct: 567 GRAGLLNKAKEFITGMPYKPTSAMWATLLGACRIHGNTEMGEWAAGKLL--EMKPDHSGY 624
Query: 405 NDVMGAC-AKMASLEMVTQLHCYITKTGL 432
++ A S + ++ Y+ G+
Sbjct: 625 YVLIANMYAAAGSWRKLAEVRTYMRNLGV 653
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 114/229 (49%), Gaps = 1/229 (0%)
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
+ SLL AC +L QG Q+H+ +I +G D N + + ++ Y ++L +A V E
Sbjct: 84 IGSLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFV-TESS 142
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
D + WN +I+A +++ E ++ ML +I+PD T+ V+ AC +
Sbjct: 143 NTLDPLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGL 202
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
++H I + + + +FV N L+ +Y + G L AR LF+ M D VSW+++I YA G
Sbjct: 203 EVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRG 262
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
EA +LF M+ GV N++ + C H G L L M
Sbjct: 263 IWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRT 311
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 165/581 (28%), Positives = 290/581 (49%), Gaps = 45/581 (7%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A L+ CSSL+ L R++ + + + Q +++++ + GS+++A F+ +
Sbjct: 41 ALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDS 97
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+ V + M+ G ++ + A++ +++M V P + F ++K C + +G+++
Sbjct: 98 KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 157
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H ++KS L A L MY K ++ +AR VF + +D+ SW +++A +S+ G
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------------- 251
AL M +P+ SV A S
Sbjct: 218 RMALEMVKSMCEEN-LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTA 276
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
AR LF+ + ++ SWN++I + N EAM +F +M D + P
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 336
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
++V L AC L +G +H +++G D NV V N++++MY KC + A +F
Sbjct: 337 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 396
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+L ++ VSWN++I Q+ + + FS+M + +KPD T+ V+ A A+++
Sbjct: 397 KL-QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITH 455
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
+H + ++ L +VFV L+D+Y KCG++ AR +F+ M V +W+++I GY
Sbjct: 456 HAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
G G AL+LF M+ + PN VT + V++ACSH GLVE GL + +M+ Y I +
Sbjct: 516 THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSM 575
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H +VDLL RAG ++EA DFI QM + V+ ++L +
Sbjct: 576 DHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGA 616
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/514 (23%), Positives = 228/514 (44%), Gaps = 79/514 (15%)
Query: 4 DYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHI 61
+ V S+C++NL +PS T ++ A S+LR + +G+++H +
Sbjct: 222 EMVKSMCEENL-------------------KPSFITIVSVLPAVSALRLISVGKEIHGYA 262
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ S V + +++MY KCGSLE AR FD M +RNVVSW +MI QN +A+
Sbjct: 263 MRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAM 322
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
++ +ML GV P + + AC+ LG + GR +H ++ ++ N+LI+MY
Sbjct: 323 LIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMY 382
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K + A ++F + + + SW +MI F++ G ++AL +F++M +P+ F +
Sbjct: 383 CKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM-RSRTVKPDTFTY 441
Query: 242 GSVFSACSNF----------------------------------------ARILFNEIDS 261
SV +A + AR++F+ +
Sbjct: 442 VSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSE 501
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG--- 318
+ +WNA+I G +H A+ LF EM+ + P+G+T S++ AC + G
Sbjct: 502 RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKC 561
Query: 319 --MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
M +Y I++ D A++ + + L A ++ + +++ AC
Sbjct: 562 FYMMKENYSIELSMDH----YGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGAC 617
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFD 435
H + R+ ++ PD ++ ++ + AS+ E V Q+ + + GL
Sbjct: 618 QIHKNVNFAEKAAERLF--ELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKT 675
Query: 436 -----VFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
V + N + + + ++K++ F+E
Sbjct: 676 PGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEK 709
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 255/509 (50%), Gaps = 40/509 (7%)
Query: 106 AMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS 165
M+ G Q AI +Y ML+S V +T+ + ++CS + G+ + HV+K
Sbjct: 96 TMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKV 155
Query: 166 EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHF 225
S + QN LI MY + DAR VF G + D+ SW SM+A + +G EA +
Sbjct: 156 GFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVY 215
Query: 226 NEMLHHGAYQPNEFIF-----GSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNA 280
+ M N I G+V AC LFNE+ DL SW+ALI+ +
Sbjct: 216 DRMPERNVIASNSMIVLFGKKGNVEEACK-----LFNEMKQKDLVSWSALISCYEQNEMY 270
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
EA+ LF EM ++ D + V S+L AC L + G VH ++K+G ++ V + NA+
Sbjct: 271 EEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNAL 330
Query: 341 LTMYAKCSVLCNALLVFK---------------------ELGK---------NADSVSWN 370
+ MY+ C + A +F E+ K + D+VSW+
Sbjct: 331 IHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWS 390
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
++I+ Q ++ E LF M KPD V+ AC +A+L+ +H YI K
Sbjct: 391 AMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKN 450
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
GL ++ + L+++Y+K G + A ++F +E V +W++LILG A G D++LK F
Sbjct: 451 GLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTF 510
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
+ M+ GV+PN +T V VL AC H+GLV+EG + M E+ I P +H C+VDLL R
Sbjct: 511 SEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGR 570
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
AG + EAE+ I M D+ W +LL +
Sbjct: 571 AGMLKEAEELIESMPMAPDVSTWGALLGA 599
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 147/558 (26%), Positives = 242/558 (43%), Gaps = 97/558 (17%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + ++N +A+ Y F +N+ TY L +CS + G+ + DH+L
Sbjct: 95 NTMMKGYMQRNSPCKAIWVYKFMLE-SNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVL 153
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGF----------------------------- 93
DV +QN ++NMY CG+L DAR F
Sbjct: 154 KVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKD 213
Query: 94 --DKMPQRNV-------------------------------VSWTAMIAGCSQNYQENDA 120
D+MP+RNV VSW+A+I+ QN +A
Sbjct: 214 VYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEA 273
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ L+ +M +G+M + S++ ACS L V G+ +H V+K +++ QNALI M
Sbjct: 274 LILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHM 333
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y+ + ++ A+ +FS D SW SMI+ + K G E+E
Sbjct: 334 YSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCG-EIEK------------------- 373
Query: 241 FGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
AR LF+ + D SW+A+I+G A E + LF EM+ PD
Sbjct: 374 -----------ARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDET 422
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
+ S++ AC L QG +H+YI K G N+ + ++ MY K + +AL VFK L
Sbjct: 423 ILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGL 482
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-EM 419
+ S +WN++I + ++ + FS M + P+ ITF V+GAC M + E
Sbjct: 483 EEKGVS-TWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEG 541
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYA 478
+ I + + ++ ++D+ + G L A +L M PDV +W +L+
Sbjct: 542 HRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACK 601
Query: 479 QFGCGDEALKLFTRMRSL 496
++G + ++ ++ L
Sbjct: 602 KYGDNETGERIGRKLVEL 619
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 179/603 (29%), Positives = 296/603 (49%), Gaps = 53/603 (8%)
Query: 24 FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
F N + R + AC+S L ++H ++ + D + ++ +
Sbjct: 6 FHGNASQARPIRHHLLAYLDACASRAHLA---ELHGRLVRAHLTSDSFVAGRLIALLASP 62
Query: 84 GSLED---ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFG 140
+ D AR FD M Q N W MI G S DA+ ++ +M + GV P +T
Sbjct: 63 AARHDMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMA 122
Query: 141 SIIKACS---GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
+++ A + GL G +HA V + S + + L+ Y F + +A VF +
Sbjct: 123 AVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEM 182
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFA 252
+DV SW SMI+A ++ G+ + L +EM G PN+ S+ SAC +
Sbjct: 183 YERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGII-PNKVTIISLLSACGQTQAVDEG 241
Query: 253 RILFNEIDSPDL-----------------------------------ASWNALIAGVASH 277
R ++N++ + SWN LI G +
Sbjct: 242 RWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQN 301
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
EA+ +F EM + PDG+T+ S+L AC L +GM VHSYI G + +
Sbjct: 302 HEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILT 361
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
N+++ MYAKC + A VF+ + K D VSW ++ ++ +Q F LF M +++
Sbjct: 362 NSLINMYAKCGDMAAAERVFQTMTKK-DVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEV 420
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
+ ++ AC+++ +L+ ++H YI + +A D+ + + L+D+Y KCG + +A +
Sbjct: 421 VAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASE 480
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL-GVSPNLVTLVGVLTACSHVG 516
+F M++ +SW+++I G A G G EA++LF +M L P+ +TL VL AC+HVG
Sbjct: 481 IFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVG 540
Query: 517 LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
+V+EGL + +M + G++P EH C+VDLL RAG + EA FI +M + + V+W SL
Sbjct: 541 MVDEGLRYFYLMSS-LGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSL 599
Query: 577 LAS 579
LA+
Sbjct: 600 LAA 602
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 180/388 (46%), Gaps = 42/388 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T L+SAC +++ GR V++ + + DV ++N +++MY KCG L DA F M
Sbjct: 224 TIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAM 283
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P R SW +I G QN++ +A++++ +ML GV P T S++ AC+ LG + G
Sbjct: 284 PARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGM 343
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H+++ + I N+LI MY K + A VF + +KDV SW M+ + K G
Sbjct: 344 HVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVK-G 402
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
++ + E + +E S+ SACS +
Sbjct: 403 HQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLE 462
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD-REL 295
+F ++ SWNA+I G+AS+ EA+ LF +M + ++
Sbjct: 463 SALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDP 522
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PDG+T+ ++L AC + +G++ + +G + I+ + + +L A
Sbjct: 523 KPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFH 582
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAE 383
K++ + V W S++AAC H++ +
Sbjct: 583 FIKKMPIEPNPVIWGSLLAACRVHHRMD 610
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 179/603 (29%), Positives = 296/603 (49%), Gaps = 53/603 (8%)
Query: 24 FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
F N + R + AC+S L ++H ++ + D + ++ +
Sbjct: 6 FHGNASQARPIRHHLLAYLDACASRAHLA---ELHGRLVRAHLTSDSFVAGRLIALLASP 62
Query: 84 GSLED---ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFG 140
+ D AR FD M Q N W MI G S DA+ ++ +M + GV P +T
Sbjct: 63 AARHDMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMA 122
Query: 141 SIIKACS---GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
+++ A + GL G +HA V + S + + L+ Y F + +A VF +
Sbjct: 123 AVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEM 182
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFA 252
+DV SW SMI+A ++ G+ + L +EM G PN+ S+ SAC +
Sbjct: 183 YERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGII-PNKVTIISLLSACGQTQAVDEG 241
Query: 253 RILFNEIDSPDL-----------------------------------ASWNALIAGVASH 277
R ++N++ + SWN LI G +
Sbjct: 242 RWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQN 301
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
EA+ +F EM + PDG+T+ S+L AC L +GM VHSYI G + +
Sbjct: 302 HEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILT 361
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
N+++ MYAKC + A VF+ + K D VSW ++ ++ +Q F LF M +++
Sbjct: 362 NSLINMYAKCGDMAAAERVFQTMTKK-DVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEV 420
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
+ ++ AC+++ +L+ ++H YI + +A D+ + + L+D+Y KCG + +A +
Sbjct: 421 VAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASE 480
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL-GVSPNLVTLVGVLTACSHVG 516
+F M++ +SW+++I G A G G EA++LF +M L P+ +TL VL AC+HVG
Sbjct: 481 IFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVG 540
Query: 517 LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
+V+EGL + +M + G++P EH C+VDLL RAG + EA FI +M + + V+W SL
Sbjct: 541 MVDEGLRYFYLMSS-LGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSL 599
Query: 577 LAS 579
LA+
Sbjct: 600 LAA 602
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 180/388 (46%), Gaps = 42/388 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T L+SAC +++ GR V++ + + DV ++N +++MY KCG L DA F M
Sbjct: 224 TIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAM 283
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P R SW +I G QN++ +A++++ +ML GV P T S++ AC+ LG + G
Sbjct: 284 PARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGM 343
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H+++ + I N+LI MY K + A VF + +KDV SW M+ + K G
Sbjct: 344 HVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVK-G 402
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
++ + E + +E S+ SACS +
Sbjct: 403 HQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLE 462
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD-REL 295
+F ++ SWNA+I G+AS+ EA+ LF +M + ++
Sbjct: 463 SALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDP 522
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PDG+T+ ++L AC + +G++ + +G + I+ + + +L A
Sbjct: 523 KPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFH 582
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAE 383
K++ + V W S++AAC H++ +
Sbjct: 583 FIKKMPIEPNPVIWGSLLAACRVHHRMD 610
>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Vitis vinifera]
Length = 742
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 173/570 (30%), Positives = 280/570 (49%), Gaps = 43/570 (7%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P+ ++ ACSSL ++ G+ +H +L N +L+ Y K G+L+ A FD
Sbjct: 50 PTLVHSILKACSSL-PVRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFD 108
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
M R+ VSW MI G + + + Q P T I AC LG++
Sbjct: 109 SMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEE 168
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G ++H ++I+S QN+L++MY D + A +F + +DV SW MI + +
Sbjct: 169 GLKMHGYIIRSGFLDIPSVQNSLLSMYADND-MERAEELFDEMCERDVISWSVMIGGYVQ 227
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------------- 254
G AL F EM + + + + SV AC+N I
Sbjct: 228 TGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLF 287
Query: 255 --------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
FNE+ + SWN++I+G+ +EA+SLF M
Sbjct: 288 VGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAG 347
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
D +T+ +LL +C + +Q +HS +I+ G++ N V N+++ Y+KC ++ A
Sbjct: 348 FRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAW 407
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F L K D+VSW+++IA + +E LF M +Q KP+ +T ++ A +
Sbjct: 408 KLFDRL-KTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVS 466
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
A L+ H + GLA +V V ++D+Y KCG +G +RK F+ + ++VSW ++I
Sbjct: 467 ADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMI 526
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
G +AL L + M+ G+ PN+VT + VL+ACSH GLVEEGL + M ++G+
Sbjct: 527 AACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGV 586
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQM 564
P EH SC+VD+L+RAG ++ A + I +M
Sbjct: 587 EPGLEHYSCMVDMLSRAGKLNSAMNLIEKM 616
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 182/393 (46%), Gaps = 44/393 (11%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
+N +I + T ++ AC++ + +GR VH ++ D+ + N I++MY KC
Sbjct: 243 SNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDH 302
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
E A F++MP RN VSW ++I+G + + ++A+ L+ M ++G + T +++++C
Sbjct: 303 ESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSC 362
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
+ +H+ VI+ + + N+LI Y+K D I A +F + KD SW
Sbjct: 363 KYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWS 422
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS----------------- 249
+MIA F+ G EA+ F EM + +PN S+ A S
Sbjct: 423 AMIAGFNHCGKPDEAIALFQEM-NQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIR 481
Query: 250 -----------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
+R F++I ++ SW A+IA + A +A++L
Sbjct: 482 RGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALAL 541
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYA 345
SEM+ L P+ +T S+L AC + +G+ +++ G + + + ++ M +
Sbjct: 542 LSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLS 601
Query: 346 KCSVLCNAL-LVFKELGKNADSVS-WNSIIAAC 376
+ L +A+ L+ K + D W ++++AC
Sbjct: 602 RAGKLNSAMNLIEKMPERMRDGAGLWGALLSAC 634
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 160/325 (49%), Gaps = 15/325 (4%)
Query: 261 SPDLASWNALIAGVASHS--NANEAMSLFSEMRDR-ELLPDGLTVHSLLCACIGRLTLYQ 317
+P L +WN I + ++ EA S + +M+ L D VHS+L AC L +
Sbjct: 9 APKLPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKAC-SSLPVRH 67
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G +H+ ++K GFDS N++L Y K L +AL VF + ++ DSVSWN +I L
Sbjct: 68 GKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSM-RSRDSVSWNIMIHGHL 126
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
+++ F + +P+ T + AC + ++E ++H YI ++G
Sbjct: 127 SRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPS 186
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS-L 496
V N L+ +Y + A +LF+ M DV+SWS +I GY Q G AL+LF M S
Sbjct: 187 VQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNA 245
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM---ENEYGIIPTREHCSCVVDLLARAGC 553
+ + +T+V VL AC++ G + G ++ ++ +Y + + ++D+ ++
Sbjct: 246 SIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVG----NSIIDMYSKCDD 301
Query: 554 VHEAEDFINQMACDADIVVWKSLLA 578
A N+M C + V W S+++
Sbjct: 302 HESAFKAFNEMPC-RNTVSWNSIIS 325
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 150/318 (47%), Gaps = 15/318 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S L + ++EAL + +S R T L+ +C + +H ++
Sbjct: 321 NSIISGLVRTEKHSEALSLF-YSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVI 379
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + + N +++ Y KC +E A FD++ ++ VSW+AMIAG + + ++AI
Sbjct: 380 RWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIA 439
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ +M Q+ P T S+++A S + + H I+ + + A++ MY
Sbjct: 440 LFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYA 499
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I +R F I K++ SWG+MIAA G +AL +EM HG +PN
Sbjct: 500 KCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHG-LKPNVVTTL 558
Query: 243 SVFSACSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
SV SACS+ F ++ + P L ++ ++ ++ N AM+L +M +
Sbjct: 559 SVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPE 618
Query: 293 RELLPDGLTVH-SLLCAC 309
R + DG + +LL AC
Sbjct: 619 R--MRDGAGLWGALLSAC 634
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 182/619 (29%), Positives = 290/619 (46%), Gaps = 115/619 (18%)
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN---------------- 114
+ N +++MY K G +EDA+ FD+M ++NV+SWT++I+G +++
Sbjct: 276 TMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMR 335
Query: 115 -------------------YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC-L 154
Y+E A+ L+ QM GV P F S+I ACS G +
Sbjct: 336 HRNEASWSTMLSGYVRVGLYEE--AVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADE 393
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G Q+H V+K+ + AL+ Y + +A+ +F + +V SW S++ +S
Sbjct: 394 GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSD 453
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-------------------------- 248
G E L + M G N+ F +V S+C
Sbjct: 454 SGNPGEVLNVYQRMRQEGV-SGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVS 512
Query: 249 ---------SNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
S+F+ + +F+ ++ D+ SWNA+I+ A H E++ F MR
Sbjct: 513 VANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLH 572
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ T+ SLL C L G +H ++K+G DSNV +CN +LT+Y++ +A
Sbjct: 573 NETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAE 632
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG----- 409
LVF+ + + D +SWNS++A +Q + + ++ + +L KPD +T+N ++G
Sbjct: 633 LVFQAMTER-DLISWNSMMACYVQDGKCLDGLKILAELL-QMGKPDRVTWNALIGGHAEN 690
Query: 410 -----------------------------ACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
A A +A LE QLH + K G D+ V N
Sbjct: 691 EEPNEAVKAYKLIREKGIPANYITMVSLAATANLAVLEEGQQLHGLVIKLGFESDLHVTN 750
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
MD+Y KCG + K+ N +SW+ LI +A+ GC +A + F M LG P
Sbjct: 751 AAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKP 810
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ VT V +L+AC+H GLV+EGL Y M E+G+ P EHC C++DLL R+G + AE F
Sbjct: 811 DHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGF 870
Query: 561 INQMACDADIVVWKSLLAS 579
I +M + + W+SLLA+
Sbjct: 871 IKEMPVPPNDLAWRSLLAA 889
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 149/547 (27%), Positives = 265/547 (48%), Gaps = 23/547 (4%)
Query: 52 QLGRKVHDHILLSKCQPDVVLQNHIL-NMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
Q GR +L S + V NH L + + KCG +EDA F M +R+VVSW AMI G
Sbjct: 108 QNGRFEKAFVLFSDMRHCGVKANHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGG 167
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
+ +D+ ++ ML+ G++P +T GS+++A + G + + Q+H + + +GS+
Sbjct: 168 YAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSY 227
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY------------- 217
I LI Y K + A+++ G+ +KD+ S ++I ++ G
Sbjct: 228 DIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAK 287
Query: 218 --ELE-ALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--ARILFNEIDSPDLASWNALIA 272
E+E A F+EM I G + AR +F+E+ + ASW+ +++
Sbjct: 288 SGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLS 347
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY-QGMQVHSYIIKMGFD 331
G EA+ LF +M + P+G V SL+ AC + +G QVH +++K G
Sbjct: 348 GYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGIL 407
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
+V V A++ Y ++ NA +F+E+ + + VSW S++ E+ ++ R
Sbjct: 408 GDVYVGTALVHFYGSIGLVYNAQKLFEEM-PDHNVVSWTSLMVGYSDSGNPGEVLNVYQR 466
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M + + TF V +C + + Q+ +I + G V V N L+ ++ S
Sbjct: 467 MRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSS 526
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+ A +F+ M D++SW+++I YA G E+L+ F MR L N TL +L+
Sbjct: 527 VEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSV 586
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
CS V ++ G ++ ++ + G+ C+ ++ L + AG +AE + Q + D++
Sbjct: 587 CSSVDNLKWGRGIHGLVV-KLGLDSNVCICNTLLTLYSEAGRSEDAE-LVFQAMTERDLI 644
Query: 572 VWKSLLA 578
W S++A
Sbjct: 645 SWNSMMA 651
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 150/596 (25%), Positives = 271/596 (45%), Gaps = 71/596 (11%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+ S C EAL S N T R+ PS Y ++ C ++ + G +H H++ +
Sbjct: 5 IQSACNLGRLAEALKL--LSSNPT--RLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNG 60
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
D+ L ++ Y K G + AR FD MP+R+VVSWTAM++G SQN + A L+
Sbjct: 61 FGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFS 120
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M GV A +AL+ ++K
Sbjct: 121 DMRHCGVK---------------------------------------ANHALVDFHSKCG 141
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
++ DA +F + +DV SW +MI ++ G+ ++ C F ML G P+ + GSV
Sbjct: 142 KMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSML-RGGLVPDCYTLGSVL 200
Query: 246 SACSN-----FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
A + A + I S++ + + + N ++ ++R L D
Sbjct: 201 RASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLF 260
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMG--------FD----SNVPVCNAILTMYAKCS 348
+ +L+ G + K G FD NV ++++ YAK
Sbjct: 261 SSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHG 320
Query: 349 V--LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
+ +A VF E+ ++ + SW+++++ ++ EE LF +M ++P+
Sbjct: 321 YGHMAHARYVFDEM-RHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVAS 379
Query: 407 VMGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
++ AC++ + + Q+H ++ KTG+ DV+V L+ Y G + +A+KLF M +
Sbjct: 380 LITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDH 439
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
+VVSW+SL++GY+ G E L ++ RMR GVS N T V ++C GL+E+ + Y
Sbjct: 440 NVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGY 496
Query: 526 RIMEN--EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+++ + +YG + + ++ + + V EA + M + DI+ W +++++
Sbjct: 497 QVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMN-ECDIISWNAMISA 551
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 137/523 (26%), Positives = 230/523 (43%), Gaps = 86/523 (16%)
Query: 33 IRPSTY--AGLISACS-SLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
+ P+ + A LI+ACS S G +VH ++ + DV + +++ YG G + +A
Sbjct: 370 VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNA 429
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
+ F++MP NVVSWT+++ G S + + + +Y +M Q GV Q TF ++ +C L
Sbjct: 430 QKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLL 489
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
LG Q+ H+I+ + N+LI+M++ F + +A VF + D+ SW +MI
Sbjct: 490 EDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMI 549
Query: 210 AAFSKLGYELEALCHFNEMLH-----------------------------HG-----AYQ 235
+A++ G E+L F+ M H HG
Sbjct: 550 SAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLD 609
Query: 236 PNEFIFGSVFSACSNFAR-----ILFNEIDSPDLASWN---------------------- 268
N I ++ + S R ++F + DL SWN
Sbjct: 610 SNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAEL 669
Query: 269 ------------ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
ALI G A + NEA+ + +R++ + + +T+ S L A L
Sbjct: 670 LQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVS-LAATANLAVLE 728
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+G Q+H +IK+GF+S++ V NA + MY KC + + L + + N +SWN +I+A
Sbjct: 729 EGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISAF 787
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
+H ++ F ML KPDH+TF ++ AC +V + Y F V
Sbjct: 788 ARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGG---LVDEGLAYYDSMTREFGV 844
Query: 437 FVMNG----LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
F ++D+ + G L A M P+ ++W SL+
Sbjct: 845 FPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLL 887
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 157/375 (41%), Gaps = 38/375 (10%)
Query: 50 SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIA 109
+L+ GR +H ++ +V + N +L +Y + G EDA + F M +R+++SW +M+A
Sbjct: 592 NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMA 651
Query: 110 GCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGS 169
Q+ + D +K+ ++LQ G P + T+ ++I G + ++
Sbjct: 652 CYVQDGKCLDGLKILAELLQMG-KPDRVTWNALIG----------GHAENEEPNEAVKAY 700
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
LI + + A Y + N+ + + G +I KLG+E + M
Sbjct: 701 KLIREKGIPANYITMVSLAATANL--AVLEEGQQLHGLVI----KLGFESDLHVTNAAM- 753
Query: 230 HHGAYQPNEFIFGSVFSACS---NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
++ C + ++L I+ L SWN LI+ A H +A
Sbjct: 754 -------------DMYGKCGEMHDVLKMLPQPINRSRL-SWNILISAFARHGCFQKARET 799
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYA 345
F EM PD +T SLL AC + +G+ + + + G + C I+ +
Sbjct: 800 FHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLG 859
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD--HIT 403
+ L +A KE+ + ++W S++AAC H E + +L D ++
Sbjct: 860 RSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVL 919
Query: 404 FNDVMGACAKMASLE 418
+++V K +E
Sbjct: 920 YSNVCATSGKWEDVE 934
>gi|242075864|ref|XP_002447868.1| hypothetical protein SORBIDRAFT_06g017180 [Sorghum bicolor]
gi|241939051|gb|EES12196.1| hypothetical protein SORBIDRAFT_06g017180 [Sorghum bicolor]
Length = 714
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 165/552 (29%), Positives = 279/552 (50%), Gaps = 41/552 (7%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
N+ IR + T A +++ C+ L+ +++H HI Q +V+L ++++YGKC L
Sbjct: 144 NSLGIRPKDVTLASVLACCAECLDLRGAQQLHGHIAKRDFQSNVILGTALVDVYGKCLLL 203
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
DAR FD + Q N +SW +I + A+ ++ +M+ +G+ P +T + AC
Sbjct: 204 TDARRAFDDILQPNDISWNVIIRRYLLAGMGDMAVHMFFRMVWAGIRPLVYTVTHAMLAC 263
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
G++ GR +H V++ + H+ +++++ MY K I A +F+ +KDV +
Sbjct: 264 RDNGALKEGRCIHTFVLRHGYEHHVHVRSSVVDMYAKCGDIDAALRLFNLAPKKDVVTST 323
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLAS 266
S+++ + G +A F+ M H +L S
Sbjct: 324 SVVSGLAACGRIADAKRVFDGMEQH-------------------------------NLVS 352
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WNA++ G + A+ LF +MR D +T+ S+L AC G L L +G ++H+ +
Sbjct: 353 WNAMLTGCVKSMDLTGALDLFQQMRHETKELDVVTLGSVLNACTGLLDLGKGEELHALAL 412
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNA--LLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
K G S + NA++ +Y+KC L NA LL+F E+G + SWNS+I+ +H+ +E
Sbjct: 413 KCGLFSYPFLMNALVRLYSKCGCLRNAERLLLF-EMGSERERFSWNSLISGYERHSMSEA 471
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
R + S+ KP TF+ + ACA + L Q+H Y+ + G D + + L+D
Sbjct: 472 ALHAL-REMQSEAKPSQSTFSSALAACANIFLLNHGKQIHAYMIRNGYDIDDILRSALVD 530
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y KC + ++F + DV+ W+S+I A GD L+LF MR G+ P+ VT
Sbjct: 531 MYSKCSLFDYSSRIFELGLSNDVILWNSMIFACAYNSKGDYGLELFDEMRKQGIRPDSVT 590
Query: 505 LVGVLTAC---SHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
+G L +C HVGL G + +M +EY IIP EH C+++LL + G + E EDF+
Sbjct: 591 FLGALVSCICEGHVGL---GRSYFTLMTDEYSIIPRIEHYECMIELLGKHGYMVELEDFV 647
Query: 562 NQMACDADIVVW 573
+ M + +W
Sbjct: 648 DHMPFEPTTAMW 659
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 173/368 (47%), Gaps = 36/368 (9%)
Query: 245 FSACSNFA--RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
+AC + A R +F+ + D SWNA+I+ + + EA SLF+ M + P +T+
Sbjct: 96 LAACGSLADAREMFDAMPRRDGGSWNAIISASSRAGHPAEAFSLFAGMNSLGIRPKDVTL 155
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
S+L C L L Q+H +I K F SNV + A++ +Y KC +L +A F ++ +
Sbjct: 156 ASVLACCAECLDLRGAQQLHGHIAKRDFQSNVILGTALVDVYGKCLLLTDARRAFDDILQ 215
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
D +SWN II L + +F RM+ + I+P T M AC +L+
Sbjct: 216 PND-ISWNVIIRRYLLAGMGDMAVHMFFRMVWAGIRPLVYTVTHAMLACRDNGALKEGRC 274
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ--- 479
+H ++ + G V V + ++D+Y KCG + +A +LFN DVV+ +S++ G A
Sbjct: 275 IHTFVLRHGYEHHVHVRSSVVDMYAKCGDIDAALRLFNLAPKKDVVTSTSVVSGLAACGR 334
Query: 480 -----------------------FGCGDE-----ALKLFTRMRSLGVSPNLVTLVGVLTA 511
GC AL LF +MR ++VTL VL A
Sbjct: 335 IADAKRVFDGMEQHNLVSWNAMLTGCVKSMDLTGALDLFQQMRHETKELDVVTLGSVLNA 394
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED-FINQMACDADI 570
C+ + + +G L+ + + G+ + +V L ++ GC+ AE + +M + +
Sbjct: 395 CTGLLDLGKGEELH-ALALKCGLFSYPFLMNALVRLYSKCGCLRNAERLLLFEMGSERER 453
Query: 571 VVWKSLLA 578
W SL++
Sbjct: 454 FSWNSLIS 461
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 120/243 (49%), Gaps = 7/243 (2%)
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
N + A C L +A +F + + D SWN+II+A + E F LF+ M + I
Sbjct: 90 NRAIESLAACGSLADAREMFDAMPRR-DGGSWNAIISASSRAGHPAEAFSLFAGMNSLGI 148
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
+P +T V+ CA+ L QLH +I K +V + L+D+Y KC L AR+
Sbjct: 149 RPKDVTLASVLACCAECLDLRGAQQLHGHIAKRDFQSNVILGTALVDVYGKCLLLTDARR 208
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
F+ + P+ +SW+ +I Y G GD A+ +F RM G+ P + T+ + AC G
Sbjct: 209 AFDDILQPNDISWNVIIRRYLLAGMGDMAVHMFFRMVWAGIRPLVYTVTHAMLACRDNGA 268
Query: 518 VEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
++EG +H + + + R S VVD+ A+ G + A N +A D+V S
Sbjct: 269 LKEGRCIHTFVLRHGYEHHVHVR---SSVVDMYAKCGDIDAALRLFN-LAPKKDVVTSTS 324
Query: 576 LLA 578
+++
Sbjct: 325 VVS 327
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 110/250 (44%), Gaps = 36/250 (14%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + ++ AL A + + + ST++ ++AC+++ L G+++H +++
Sbjct: 457 NSLISGYERHSMSEAALHA--LREMQSEAKPSQSTFSSALAACANIFLLNHGKQIHAYMI 514
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D +L++ +++MY KC + + F+ +V+ W +MI C+ N + + ++
Sbjct: 515 RNGYDIDDILRSALVDMYSKCSLFDYSSRIFELGLSNDVILWNSMIFACAYNSKGDYGLE 574
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ +M + G+ P TF + +C G V LGR +
Sbjct: 575 LFDEMRKQGIRPDSVTFLGALVSCICEGHVGLGR-------------------------S 609
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
F + D +S I R + + MI K GY +E + + H ++P ++
Sbjct: 610 YFTLMTDE---YSIIPR--IEHYECMIELLGKHGYMVE----LEDFVDHMPFEPTTAMWL 660
Query: 243 SVFSACSNFA 252
+F C +
Sbjct: 661 RIFDCCREYG 670
>gi|222636729|gb|EEE66861.1| hypothetical protein OsJ_23658 [Oryza sativa Japonica Group]
Length = 728
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 158/508 (31%), Positives = 263/508 (51%), Gaps = 40/508 (7%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG-VMP 134
+L + + DAR FD+ P R WT I+GC++ + D ++ + +ML G P
Sbjct: 51 VLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATP 110
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL--IAQNALIAMYTKFDRILDARN 192
F ++++ C+G+G V G+++H +++ +G HL + NA++ MY K + AR
Sbjct: 111 NAFVLAAVVRCCAGMGDVESGKRVHGWMLR--NGVHLDVVLCNAVLDMYAKCGQFERARR 168
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA 252
VF +A +D SW I A + G I GS+
Sbjct: 169 VFGAMAERDAVSWNIAIGACIQSGD----------------------ILGSM-------- 198
Query: 253 RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
LF+E D SWN +I+G+ +A +A+S M ++ + T +S G
Sbjct: 199 -QLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYT-YSTAFVLAGM 256
Query: 313 LTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV--SW 369
L L G Q+H ++ + + V ++++ MY KC +L A VF + +W
Sbjct: 257 LLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAW 316
Query: 370 NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
++++A +Q+ + EE LF RML + D T V ACA + +E Q+H + K
Sbjct: 317 STMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEK 376
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
D + + ++D+Y KCG+L AR +F+ ++ W+S++ YA G G A++L
Sbjct: 377 LWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIEL 436
Query: 490 FTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLA 549
F RM + ++PN +TLVGVL+ACSHVGLV EG ++ M+ EYGI+P+ EH +C+VDL
Sbjct: 437 FERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYG 496
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLL 577
R+G + +A++FI + + + +VWK+LL
Sbjct: 497 RSGLLDKAKNFIEENNINHEAIVWKTLL 524
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 172/363 (47%), Gaps = 38/363 (10%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACI 310
AR +F+E + W I+G A + M F+EM + E P+ + +++ C
Sbjct: 64 ARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCA 123
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
G + G +VH ++++ G +V +CNA+L MYAKC A VF + + D+VSWN
Sbjct: 124 GMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAER-DAVSWN 182
Query: 371 SIIAACLQHNQAEELFRLFS-------------------------------RMLASQIKP 399
I AC+Q +LF RM + +
Sbjct: 183 IAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVF 242
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
+H T++ + ++ QLH + L D FV + LMD+Y KCG L +A +F
Sbjct: 243 NHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVF 302
Query: 460 NFME--NPDV-VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
+ D+ +WS+++ GY Q G +EAL LF RM GV+ + TL V AC++VG
Sbjct: 303 DHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVG 362
Query: 517 LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
+VE+G ++ +E + + S +VD+ A+ G + +A ++ AC +I VW S+
Sbjct: 363 MVEQGRQVHGCVEKLWYKLDA-PLASAIVDMYAKCGNLEDARSIFDR-ACTKNIAVWTSM 420
Query: 577 LAS 579
L S
Sbjct: 421 LCS 423
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 116/512 (22%), Positives = 210/512 (41%), Gaps = 92/512 (17%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTY--AGLISACSSLRSLQLGRKVHDHILL 63
+S ++ Y + + A F++ P+ + A ++ C+ + ++ G++VH +L
Sbjct: 83 ISGCARRGRYADGMRA--FAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLR 140
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN--------- 114
+ DVVL N +L+MY KCG E AR F M +R+ VSW I C Q+
Sbjct: 141 NGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQL 200
Query: 115 YQEN----------------------DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
+ E+ DA+ +M Q+GV+ +T+ + L
Sbjct: 201 FDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLP 260
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF---SGIARKDVTSWGSMI 209
LGRQLH V+ + +++L+ MY K + A +VF S + R +W +M+
Sbjct: 261 DLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMV 320
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------ 251
A + + G E EAL F ML G + F SV +AC+N
Sbjct: 321 AGYVQNGREEEALDLFRRMLREGV-AADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWY 379
Query: 252 ----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
AR +F+ + ++A W +++ ASH A+ LF
Sbjct: 380 KLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFER 439
Query: 290 MRDRELLPDGLTVHSLLCAC-----IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
M ++ P+ +T+ +L AC + LY Y G ++ N I+ +Y
Sbjct: 440 MTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEY----GIVPSIEHYNCIVDLY 495
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
+ +L A +E N +++ W +++ A Q Q+ E++ +++ + + +
Sbjct: 496 GRSGLLDKAKNFIEENNINHEAIVWKTLLNASNQ--QSAEIYAYLEKLVERLKEIGYTSR 553
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
D++ + E + H K +AF +
Sbjct: 554 TDLVVHDVEDEQRETALKFHS--EKLAIAFGI 583
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 192/690 (27%), Positives = 314/690 (45%), Gaps = 121/690 (17%)
Query: 5 YVSSLCKQNLYNEA---LVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
++SSLCK E+ L +F + +I P Y L+ C R+L G+++H I
Sbjct: 1145 HISSLCKDGHLQESVHLLSEMEFE----DFQIGPEIYGELLQGCVYERALHTGQQIHARI 1200
Query: 62 LLSK--CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIA-GCSQNYQEN 118
L + + ++ ++ Y KC E A F ++ RNV SW A++ C + E
Sbjct: 1201 LKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSE- 1259
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
DA+ +I+M ++GV P F +++KAC L + LG+ +H +V+K G+ + ++L+
Sbjct: 1260 DALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLV 1319
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
MY K + DAR VF + K+V +W SMI + + G EA+ F +M G +P
Sbjct: 1320 DMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGI-EPTR 1378
Query: 239 FIFGSVFSACSNF----------------------------------------ARILFNE 258
S SA +N A ++F+
Sbjct: 1379 VTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSR 1438
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ D+ +WN LI+ H +A+++ MR L D +T+ S+L A + G
Sbjct: 1439 MLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLG 1498
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCS-----------------VLCNALLV-FKEL 360
+ H Y I+ +S+V V N+I+ MYAKC VL N LL + ++
Sbjct: 1499 KEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQV 1558
Query: 361 GKNADS----------------VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
G + ++ +SWNS+I L++ Q E +FS+M + +P+ IT+
Sbjct: 1559 GLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITW 1618
Query: 405 N-----------------------------------DVMGACAKMASLEMVTQLHCYITK 429
V+ AC + SL +H +IT+
Sbjct: 1619 TTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITR 1678
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
V V L+D+Y KCGS+ A+K+F+ M + ++ ++++I YA G EAL L
Sbjct: 1679 HEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALAL 1738
Query: 490 FTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLA 549
F ++ G+ P+ +T +L+ACSH GLV EGL+L+ M +++ + P EH CVV LL+
Sbjct: 1739 FKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLS 1798
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLLAS 579
R G + EA I M D + SLL +
Sbjct: 1799 RCGNLDEALRLILTMPFQPDAHILGSLLTA 1828
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 180/369 (48%), Gaps = 21/369 (5%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
N+R T + ++SA + +++LG++ H + + + DVV+ N I++MY KC ++DA
Sbjct: 1474 NLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDA 1533
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD +R++V W ++A +Q +A+KL+ QM V P ++ S+I
Sbjct: 1534 RKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRN 1593
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK----FDRILDARNVFSGIARKDVTSW 205
G V + + + + +LI LI+ + ++ IL + + R + S
Sbjct: 1594 GQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASI 1653
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG--------SVFSACSNF--ARIL 255
S++ A + ++ +L + + HG +EF +++ C + A+ +
Sbjct: 1654 TSVLLACT----DIPSLWYGRAI--HGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKV 1707
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F+ + S +L +NA+I+ A H A EA++LF ++ + PD +T S+L AC +
Sbjct: 1708 FHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLV 1767
Query: 316 YQGMQVHSYII-KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
+G+ + + ++ K + + ++++ ++C L AL + + D+ S++
Sbjct: 1768 NEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLT 1827
Query: 375 ACLQHNQAE 383
AC +H++ E
Sbjct: 1828 ACREHHEIE 1836
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 245/484 (50%), Gaps = 48/484 (9%)
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI---IKACSGLGSVC 153
P +SW I + DAI L+++M ++ P S+ +K+C+ LG
Sbjct: 10 PWPPPLSWAHQIRMAAAQGHFRDAISLFLRM-RACAAPRSSVPASLPAALKSCAALGLSA 68
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
LG LHA I+S + NAL+ +Y K S + VTS G
Sbjct: 69 LGASLHALAIRSGAFADRFTANALLNLYCKLP--------CSYLHSTGVTSVG------- 113
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAG 273
G+ S R +F+E+ D+ SWN L+ G
Sbjct: 114 ----------------------------GTGSSTALESVRKVFDEMIERDVVSWNTLVLG 145
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
A +EA+ L +M PD T+ S+L + +G +VH + ++ GFD++
Sbjct: 146 CAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKRGSEVHGFAVRNGFDND 205
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
V V ++++ MYA C+ ++ VF L D + WNS++A C Q+ EE +F RML
Sbjct: 206 VFVGSSLIDMYANCTRTDYSVKVFDNLPVR-DPILWNSVLAGCAQNGSVEEALGIFRRML 264
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
+ ++P +TF+ ++ C +ASL QLH Y+ + G +VF+ + L+D+Y KCG +
Sbjct: 265 QTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDNVFISSSLIDMYCKCGEIS 324
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
A +F+ M +PDVVSW+++I+GYA G EAL LF RM PN +T + VLTACS
Sbjct: 325 IAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACS 384
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
H GLV++G ++ M + YGI+PT EHC+ + D+L RAG + EA +FI++M VW
Sbjct: 385 HAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAYNFISKMQIKPTASVW 444
Query: 574 KSLL 577
+LL
Sbjct: 445 STLL 448
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 131/250 (52%), Gaps = 6/250 (2%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTY--AGLISACSSLRSLQLGRKVHDH 60
N V ++ ++EALV + RP ++ + ++ + ++ G +VH
Sbjct: 140 NTLVLGCAEEGRHHEALV---LVRKMWREGFRPDSFTLSSVLPIFAECADVKRGSEVHGF 196
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ + DV + + +++MY C + + FD +P R+ + W +++AGC+QN +A
Sbjct: 197 AVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLAGCAQNGSVEEA 256
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ ++ +MLQ+GV P TF S+I C L S+ G+QLHA+VI+ ++ ++LI M
Sbjct: 257 LGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDNVFISSSLIDM 316
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K I A ++F + DV SW +MI ++ G EAL F E + G +PN
Sbjct: 317 YCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLF-ERMELGNAKPNHIT 375
Query: 241 FGSVFSACSN 250
F +V +ACS+
Sbjct: 376 FLAVLTACSH 385
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 174/430 (40%), Gaps = 68/430 (15%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMY-------------- 80
P++ + +C++L LG +H + S D N +LN+Y
Sbjct: 51 PASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVT 110
Query: 81 -----GKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
G +LE R FD+M +R+VVSW ++ GC++ + ++A+ L +M + G P
Sbjct: 111 SVGGTGSSTALESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPD 170
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
FT S++ + V G ++H +++ + + ++LI MY R + VF
Sbjct: 171 SFTLSSVLPIFAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFD 230
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI- 254
+ +D W S++A ++ G EAL F ML G +P F S+ C N A +
Sbjct: 231 NLPVRDPILWNSVLAGCAQNGSVEEALGIFRRMLQTGV-RPVPVTFSSLIPVCGNLASLR 289
Query: 255 ---------------------------------------LFNEIDSPDLASWNALIAGVA 275
+F+ + SPD+ SW A+I G A
Sbjct: 290 FGKQLHAYVIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYA 349
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNV 334
H A EA+ LF M P+ +T ++L AC + +G + S G +
Sbjct: 350 LHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTL 409
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFR 387
C A+ + + L A ++ + W++++ AC H A+++
Sbjct: 410 EHCAALADILGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIME 469
Query: 388 LFSRMLASQI 397
L R + S +
Sbjct: 470 LEPRSIGSHV 479
>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 698
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 170/551 (30%), Positives = 269/551 (48%), Gaps = 48/551 (8%)
Query: 74 NHILNMYG-KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
N +L Y L AR FD++P+ + SW +++A A +L M + G+
Sbjct: 38 NQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLAAHVSIGAHPAACRLLRAMHERGL 97
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
F GS +++ + +G LG QLH+ +K+ ++ + AL+ MY K R DA
Sbjct: 98 AANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFSATALLHMYAKCGRTRDACR 157
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV-------- 244
+F G+ ++ SW +++A + + G A+ F EM G + P+E F ++
Sbjct: 158 LFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREG-FLPDEATFAALLTVVNDST 216
Query: 245 -----------------------------FSACSNFA--RILFNEI-DSPDLASWNALIA 272
+S C A R +F+EI D DL SWNA++
Sbjct: 217 CFLMHQLHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRIFDEIGDRSDLISWNAMLG 276
Query: 273 GVASHSNANEAMSLF-SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
A+H +EAM F S MR + PD + S++ AC + G +H + K GF+
Sbjct: 277 AYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACAEHRD-HGGTVIHGLVSKNGFE 335
Query: 332 SNVPVCNAILTMYAKCSVLC---NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
VCNA++ MY + S C +A F L D+VSWNS++ QH + + R
Sbjct: 336 GVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLK-DTVSWNSMLTGYSQHGLSADALRF 394
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
F M + I D F+ + +C+ +A L + Q+H + ++G A + FV + L+ +Y K
Sbjct: 395 FRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSGFASNNFVSSSLIFMYSK 454
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
G L A K F + V W+S++ GYAQ G LF +M L V + +T VG+
Sbjct: 455 SGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRSLFNQMLELKVPLDHITFVGL 514
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
+TACSH GLV+EG + ME+ YGI EH +C +DL RAG + +A++ I+ M +
Sbjct: 515 ITACSHAGLVDEGSEILNTMESRYGIPLRMEHYACGIDLYGRAGQLDKAKELIDSMPFEP 574
Query: 569 DIVVWKSLLAS 579
D +VW +LL +
Sbjct: 575 DAMVWMTLLGA 585
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 231/468 (49%), Gaps = 49/468 (10%)
Query: 53 LGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCS 112
LG ++H + + +V +L+MY KCG DA FD MP+RN VSW A++AG
Sbjct: 119 LGTQLHSLAVKAGLADNVFSATALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYV 178
Query: 113 QNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC-LGRQLHAHVIKSEHGSHL 171
++ + A++L+++M + G +P + TF +++ + S C L QLH ++K L
Sbjct: 179 ESGKVAPAVQLFVEMEREGFLPDEATFAALLTVVN--DSTCFLMHQLHGKIVKYGSALGL 236
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
I NA I Y++ + ++R +F I R D+ SW +M+ A++ G E EA+ F M+
Sbjct: 237 IVLNAAITAYSQCGALANSRRIFDEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMR 296
Query: 231 HGAYQPNEFIFGSVFSACSNF--------------------------------------- 251
QP+ + F S+ SAC+
Sbjct: 297 ASGVQPDMYSFTSIISACAEHRDHGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCM 356
Query: 252 ---ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCA 308
A F+ + D SWN+++ G + H + +A+ F M+ + D + L +
Sbjct: 357 MEDAYKCFDSLLLKDTVSWNSMLTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRS 416
Query: 309 CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS 368
C L G Q+H +I+ GF SN V ++++ MY+K +L +A+ F+E K++ SV
Sbjct: 417 CSDLALLRLGRQIHGLVIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSS-SVP 475
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ-LHCYI 427
WNS++ QH +A+ + LF++ML ++ DHITF ++ AC+ ++ ++ L+
Sbjct: 476 WNSMMFGYAQHGKAQAVRSLFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEILNTME 535
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++ G+ + +D+Y + G L A++L + M PD + W +L+
Sbjct: 536 SRYGIPLRMEHYACGIDLYGRAGQLDKAKELIDSMPFEPDAMVWMTLL 583
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 103/212 (48%), Gaps = 5/212 (2%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + L +AL + Q+ NI ++ + +CS L L+LGR++H ++
Sbjct: 376 NSMLTGYSQHGLSADALRFFRCMQSE-NITTDEYAFSAALRSCSDLALLRLGRQIHGLVI 434
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S + + + ++ MY K G L+DA F++ + + V W +M+ G +Q+ +
Sbjct: 435 RSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRS 494
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL--IAM 180
L+ QML+ V TF +I ACS G V G ++ + ++S +G L ++ I +
Sbjct: 495 LFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEI-LNTMESRYGIPLRMEHYACGIDL 553
Query: 181 YTKFDRILDARNVFSGIA-RKDVTSWGSMIAA 211
Y + ++ A+ + + D W +++ A
Sbjct: 554 YGRAGQLDKAKELIDSMPFEPDAMVWMTLLGA 585
>gi|147820082|emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
Length = 800
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 175/561 (31%), Positives = 279/561 (49%), Gaps = 71/561 (12%)
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
S + N+I++ Y KCG + A FD+ QR+ VSW MIAG A++
Sbjct: 28 SGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNFETALEF 87
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
M + G ++FGSI+K + +G V +G+Q+H+ ++K + ++ A +AL+ MY K
Sbjct: 88 LKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGSALLDMYAK 147
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLG-----------YELEAL---------- 222
+R+ DA VF I ++ +W ++I+ ++ +G ELE +
Sbjct: 148 CERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDCMELEGVEIDDGTFAPL 207
Query: 223 ---------------CHFNEMLHHGAYQP----NEFIFGSVFSACSNFA---RILFNEID 260
H +++ HG N I + +S C + R+ I+
Sbjct: 208 LTLLDDPDLHKLTTQVH-AKIVKHGLASDTTVCNAII--TAYSECGSIEDAERVFDGAIE 264
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ DL +WN+++A ++ EA LF EM+ PD T S++ A QG
Sbjct: 265 TRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFEXAHQGQGKS 324
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKC--SVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
+H +IK G + VP+ N+++ MY K + AL +F+ L +N D VSWNSI+ Q
Sbjct: 325 LHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESL-ENKDHVSWNSILTGFSQ 383
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+E+ + F M + + DH F+ V+ +C+ +A+L++ Q+H
Sbjct: 384 SGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVH-------------- 429
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
+ CG + ARK F+ ++W+SLI GYAQ G G AL LF M+ V
Sbjct: 430 --------VLCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRV 481
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAE 558
+ +T V VLTACSH+GLVEEG + ME++YGI P EH +C++DLL RAG + EA+
Sbjct: 482 KLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAK 541
Query: 559 DFINQMACDADIVVWKSLLAS 579
I M + D +VWK+LL +
Sbjct: 542 ALIEAMPFEPDAMVWKTLLGA 562
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 119/493 (24%), Positives = 207/493 (41%), Gaps = 71/493 (14%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++ ++ + + +++G++VH I+ + +V + +L+MY KC +EDA F +
Sbjct: 102 SFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGSALLDMYAKCERVEDAFEVFKSI 161
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
RN V+W A+I+G + A L M GV TF ++ L
Sbjct: 162 NIRNSVTWNALISGYAHVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTT 221
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG-IARKDVTSWGSMIAAFSKL 215
Q+HA ++K S NA+I Y++ I DA VF G I +D+ +W SM+AA+ +
Sbjct: 222 QVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAY-LV 280
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------------------- 254
+ E + ++P+ + + SV SA A
Sbjct: 281 NNQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFEXAHQGQGKSLHGLVIKRGLEFLVPI 340
Query: 255 ---------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
+F +++ D SWN+++ G + + +A+ F MR +
Sbjct: 341 SNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQ 400
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
++ D ++L +C TL G QVH C V+ +A
Sbjct: 401 YVVIDHYAFSAVLRSCSDLATLQLGQQVH----------------------VLCGVIEDA 438
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
F K++ S++WNS+I QH + + LF M ++K DHITF V+ AC+
Sbjct: 439 RKSFDATPKDS-SIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSH 497
Query: 414 MASLEM-VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWS 471
+ +E + L + G+ + ++D+ + G L A+ L M PD + W
Sbjct: 498 IGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWK 557
Query: 472 SLILGYAQFGCGD 484
+L LG + CGD
Sbjct: 558 TL-LGACR-TCGD 568
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 184/402 (45%), Gaps = 36/402 (8%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ I T+A L++ +L +VH I+ D + N I+ Y +CGS+EDA
Sbjct: 197 VEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAE 256
Query: 91 MGFD-KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
FD + R++V+W +M+A N QE +A +L+++M G P +T+ S+I A
Sbjct: 257 RVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFEX 316
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK-FDRILD-ARNVFSGIARKDVTSWGS 207
G+ LH VIK + N+LIAMY K + +D A N+F + KD SW S
Sbjct: 317 AHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNS 376
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------- 251
++ FS+ G +AL F M + + F +V +CS+
Sbjct: 377 ILTGFSQSGLSEDALKFFENMRSQYVV-IDHYAFSAVLRSCSDLATLQLGQQVHVLCGVI 435
Query: 252 --ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
AR F+ +WN+LI G A H A+ LF M+DR + D +T ++L AC
Sbjct: 436 EDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTAC 495
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVP------VCNAILTMYAKCSVLCNALLVFKELGKN 363
+ +G S++ M D +P C ++ + + L A + + +
Sbjct: 496 SHIGLVEEGW---SFLKSMESDYGIPPRMEHYAC--MIDLLGRAGRLDEAKALIEAMPFE 550
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP-DHITF 404
D++ W +++ AC E ++ S +L +++P +H T+
Sbjct: 551 PDAMVWKTLLGACRTCGDIELASQVASHLL--ELEPEEHCTY 590
>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Vitis vinifera]
Length = 729
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 191/633 (30%), Positives = 309/633 (48%), Gaps = 87/633 (13%)
Query: 24 FSQNNTNIRIRPS--TYAGLISACSSLR-----------SLQLGRKVHDHI---LLS--- 64
F Q +++ ++P T + ++AC++LR S+Q G K + H+ LLS
Sbjct: 40 FVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYA 99
Query: 65 KCQ--------------PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
K + PDV +L+ K G + A F++ P+ V W A+I G
Sbjct: 100 KSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITG 159
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
C++N A+ L+ +M Q GV ++TF S++ CS L + GR++H VIK+
Sbjct: 160 CAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLCS-LELLDFGREVHTLVIKTGFLVR 218
Query: 171 LIAQNALIAMYTKFDRILDARNVF---SGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
NAL+ MY ++ DA VF D+T + MI + +G + EAL F E
Sbjct: 219 ASVINALLTMYFNSGKVADAYEVFEEAESTVHDDIT-FNVMIGGLASVGRDEEALIMFKE 277
Query: 228 MLHHGAYQPNEFIFGSVFSACSNFARI--------------------------------- 254
M +P E F SV S+CS+ AR+
Sbjct: 278 M-QEACLRPTELTFVSVMSSCSS-ARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNL 335
Query: 255 -----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCA- 308
+F+ ++ DL SWN +I A + A+ F +M+ + PD T+ SLL +
Sbjct: 336 HAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASS 395
Query: 309 -CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
+ + ++Q + + K G +S + V NA+++ ++K + A VF + + + +
Sbjct: 396 ESLEIVKMFQAL-----VSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNM-SSPNLI 449
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
SWN+II+ L + + F +L S +KP+ T + V+ CA +++L Q+H YI
Sbjct: 450 SWNTIISGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYI 509
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
++G+ + N L+ +Y KCG L + ++FN M D+VSW+++I YAQ G G EA+
Sbjct: 510 LRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAV 569
Query: 488 KLFTRMR-SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
F M+ S GV P+ T VL+ACSH GLV++G ++ M N+YG P +H SC+VD
Sbjct: 570 HFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVD 629
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
LL RAG + EAE IN +W +L ++
Sbjct: 630 LLGRAGYLEEAERLINSKHLKIVSSIWWTLFSA 662
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 232/486 (47%), Gaps = 42/486 (8%)
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM-PGQFTFGSIIKACSGLGSVC 153
K ++ ++A ++++ + +++L++Q+ S + P FT S + AC+ L
Sbjct: 11 KNAAEQLIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAA 70
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
G QLHA+ I++ ++ N L++ Y K ++ + VF+ I DV SW ++++A +
Sbjct: 71 SGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACT 130
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAG 273
KLG ++ CH LFN+ WNA+I G
Sbjct: 131 KLG-QIGYACH------------------------------LFNQTPRMIPVVWNAIITG 159
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
A + + A++LF EM + D T S+L C L + G +VH+ +IK GF
Sbjct: 160 CAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLCSLELLDF-GREVHTLVIKTGFLVR 218
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNA-DSVSWNSIIAACLQHNQAEELFRLFSRM 392
V NA+LTMY + +A VF+E D +++N +I + EE +F M
Sbjct: 219 ASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEM 278
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
+ ++P +TF VM +C +S + Q+H K G V N M +Y CG+L
Sbjct: 279 QEACLRPTELTFVSVMSSC---SSARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNL 335
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
+ +F+ +E D++SW+ +I+ YAQ A+ F +M+ G+ P+ T+ +L +
Sbjct: 336 HAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASS 395
Query: 513 SHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
+ +V+ +++ + ++ G+ E + +V ++ G + +A N M+ +++
Sbjct: 396 ESLEIVK----MFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMS-SPNLIS 450
Query: 573 WKSLLA 578
W ++++
Sbjct: 451 WNTIIS 456
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 177/394 (44%), Gaps = 57/394 (14%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHIL---LSKCQPDVVLQNHILNMYGKCGSLE 87
+RP+ T+ ++S+CSS R + +VH + C P + N + MY CG+L
Sbjct: 283 LRPTELTFVSVMSSCSSAR---VSHQVHAQAIKMGFEACTP---VSNAAMTMYSSCGNLH 336
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
M FD++ +++++SW +I +Q AI ++QM ++G+ P +FT GS++ +
Sbjct: 337 AVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSE 396
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
L V + A V K+ S + NAL++ ++K +I A VF+ ++ ++ SW +
Sbjct: 397 SLEIV---KMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNT 453
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------- 254
+I+ F G+ L+ L F E+L +PN + V S C++ + +
Sbjct: 454 IISGFLFNGFTLQGLEQFYELL-MSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRS 512
Query: 255 ---------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
+FN ++ D+ SWNA+I+ A H EA+ F
Sbjct: 513 GVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFF 572
Query: 288 SEMRDR-ELLPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYA 345
M+D + PD T ++L AC + G ++ +S + GF+ + I+ +
Sbjct: 573 KAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLG 632
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+ L A + S W ++ +AC H
Sbjct: 633 RAGYLEEAERLINSKHLKIVSSIWWTLFSACAAH 666
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 126/250 (50%), Gaps = 8/250 (3%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + + + N Y A++A+ I T L+++ SL +++ + L
Sbjct: 354 NIIIMNYAQGNFYRLAILAF-LQMQRAGIEPDEFTIGSLLASSESLEIVKMFQA-----L 407
Query: 63 LSK--CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+SK + + N +++ + K G +E A F+ M N++SW +I+G N
Sbjct: 408 VSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQG 467
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
++ + ++L S + P +T ++ C+ + ++ G+Q+H ++++S S NALI M
Sbjct: 468 LEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITM 527
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K + + +F+ + +D+ SW +MI+A+++ G EA+ F M G +P++
Sbjct: 528 YAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQAT 587
Query: 241 FGSVFSACSN 250
F +V SACS+
Sbjct: 588 FTAVLSACSH 597
>gi|449453244|ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Cucumis sativus]
Length = 735
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 176/575 (30%), Positives = 283/575 (49%), Gaps = 53/575 (9%)
Query: 51 LQLGRKVHDHILLSKC-----QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWT 105
L L K+ D + L + +PDV +L+ K G +E A FD MP+ NV W
Sbjct: 102 LSLYAKIEDFVSLKRGFQEIEKPDVYSWTTLLSACTKMGHIEYASEMFDIMPKGNVACWN 161
Query: 106 AMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS 165
AMI G +++ + A+ + +M + GV P ++F I+ C+ LGRQ+H+ VIK+
Sbjct: 162 AMITGSAESGLDWVAMNTFYEMHKMGVKPDNYSFACILSLCTKEIED-LGRQVHSSVIKA 220
Query: 166 EHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR--KDVTSWGSMIAAFSKLGYELEALC 223
+ NALI MY + + DA VF G +D ++ MI + EAL
Sbjct: 221 GYLRKTSVVNALITMYFSIENLEDAYEVFEGTESEVRDQITYNVMIDGLVCVRRNEEALI 280
Query: 224 HFNEMLHHGAYQPNEFIFGSVFSACS---------------------------------- 249
F +M P E F S+ S+CS
Sbjct: 281 MFKDM-KRACLSPTELTFVSIMSSCSIIQVAQQVHSQAIKLGFESFTLVGNSTITMYTSC 339
Query: 250 ---NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
A +F + DL SWNA+I+ + A+ F +M+ + PD T SLL
Sbjct: 340 GEFQAANAVFQMLIEKDLISWNAIISSYVQGNFGKSAVLAFLQMQRTGIGPDEFTFGSLL 399
Query: 307 CACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
G + ++ VH+Y+ K G + + NA+++ YAKC + +L VF E+ + +
Sbjct: 400 ----GVSEFIEIVEMVHAYVYKNGLILIIEILNALVSAYAKCRKVKQSLQVFSEIN-SKN 454
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
+SWN++I L + + FS+++ S++KP T + V+ CA +++L++ Q+H
Sbjct: 455 IISWNTVIYGFLLNGLPLQALEHFSKLIMSKLKPSTFTLSIVLSICANISTLDIGKQIHG 514
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
YI ++G + + + NGL+ +Y KCG LG + + FN M D+VSW+S+I YAQ G G E
Sbjct: 515 YILRSGNSSETSLCNGLITMYSKCGLLGWSLRTFNVMIERDIVSWNSIISAYAQHGQGKE 574
Query: 486 ALKLFTRMRSL-GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV 544
A+ F M+ + + P+ T +L+ACSH GLVEE + IM +Y +P+ + SC+
Sbjct: 575 AVDCFKAMQDMPSIMPDQATFTTILSACSHAGLVEEACQILDIMLIDYRAVPSVDQLSCI 634
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
VDL+ R+G + +AE I VW +L ++
Sbjct: 635 VDLIGRSGYIDQAESVIESAQYGEHTHVWWALFSA 669
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/557 (22%), Positives = 252/557 (45%), Gaps = 87/557 (15%)
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS---GVMPGQFTFGSIIKACSGLGSVCLG 155
++++ + ++A ++ + D+++L+ Q+ S + P + + + C+ + G
Sbjct: 20 QDLLEYNRLLAELKRSSRYIDSLQLFTQIHSSHCFNIKPDHYNLSTTLAVCANFRDIAFG 79
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
QLH + I+S + N ++++Y K + + + F I + DV SW ++++A +K+
Sbjct: 80 SQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKPDVYSWTTLLSACTKM 139
Query: 216 GY-------------------------------ELEALCHFNEMLHHGAYQPNEFIFGSV 244
G+ + A+ F EM H +P+ + F +
Sbjct: 140 GHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEM-HKMGVKPDNYSFACI 198
Query: 245 FSACSNFARILFNEIDSP-----------------------------------------D 263
S C+ L ++ S D
Sbjct: 199 LSLCTKEIEDLGRQVHSSVIKAGYLRKTSVVNALITMYFSIENLEDAYEVFEGTESEVRD 258
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVH 322
++N +I G+ EA+ +F +M+ L P LT S++ +C ++ Q QVH
Sbjct: 259 QITYNVMIDGLVCVRRNEEALIMFKDMKRACLSPTELTFVSIMSSC----SIIQVAQQVH 314
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
S IK+GF+S V N+ +TMY C A VF+ L + D +SWN+II++ +Q N
Sbjct: 315 SQAIKLGFESFTLVGNSTITMYTSCGEFQAANAVFQMLIEK-DLISWNAIISSYVQGNFG 373
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
+ F +M + I PD TF ++G + +EMV H Y+ K GL + ++N L
Sbjct: 374 KSAVLAFLQMQRTGIGPDEFTFGSLLGVSEFIEIVEMV---HAYVYKNGLILIIEILNAL 430
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+ Y KC + + ++F+ + + +++SW+++I G+ G +AL+ F+++ + P+
Sbjct: 431 VSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGFLLNGLPLQALEHFSKLIMSKLKPST 490
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
TL VL+ C+++ ++ G ++ + G C+ ++ + ++ G + + N
Sbjct: 491 FTLSIVLSICANISTLDIGKQIHGYILRS-GNSSETSLCNGLITMYSKCGLLGWSLRTFN 549
Query: 563 QMACDADIVVWKSLLAS 579
M + DIV W S++++
Sbjct: 550 VM-IERDIVSWNSIISA 565
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 193/439 (43%), Gaps = 54/439 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++S+CS + Q+ ++VH + + ++ N + MY CG + A F +
Sbjct: 296 TFVSIMSSCSII---QVAQQVHSQAIKLGFESFTLVGNSTITMYTSCGEFQAANAVFQML 352
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+++++SW A+I+ Q A+ ++QM ++G+ P +FTFGS++ + V
Sbjct: 353 IEKDLISWNAIISSYVQGNFGKSAVLAFLQMQRTGIGPDEFTFGSLLGVSEFIEIV---E 409
Query: 157 QLHAHVIKSEHGSHLIAQ--NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
+HA+V K +G LI + NAL++ Y K ++ + VFS I K++ SW ++I F
Sbjct: 410 MVHAYVYK--NGLILIIEILNALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGFLL 467
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------------- 254
G L+AL HF++++ +P+ F V S C+N + +
Sbjct: 468 NGLPLQALEHFSKLI-MSKLKPSTFTLSIVLSICANISTLDIGKQIHGYILRSGNSSETS 526
Query: 255 --------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD-R 293
FN + D+ SWN++I+ A H EA+ F M+D
Sbjct: 527 LCNGLITMYSKCGLLGWSLRTFNVMIERDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMP 586
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHS-YIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
++PD T ++L AC + + Q+ +I +V + I+ + + +
Sbjct: 587 SIMPDQATFTTILSACSHAGLVEEACQILDIMLIDYRAVPSVDQLSCIVDLIGRSGYIDQ 646
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A V + + W ++ +AC H L R+ +R+L + + + + + A
Sbjct: 647 AESVIESAQYGEHTHVWWALFSACAAHENL-RLGRIVARILLEKERDNPSVYVVLSNIYA 705
Query: 413 KMASLEMVTQLHCYITKTG 431
E + I KTG
Sbjct: 706 SAGCWEEAANVRELIKKTG 724
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 126/248 (50%), Gaps = 4/248 (1%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +SS + N A++A+ T I T+ L+ + +++ VH ++
Sbjct: 361 NAIISSYVQGNFGKSAVLAF-LQMQRTGIGPDEFTFGSLLGVSEFIEIVEM---VHAYVY 416
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + + N +++ Y KC ++ + F ++ +N++SW +I G N A++
Sbjct: 417 KNGLILIIEILNALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGFLLNGLPLQALE 476
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ +++ S + P FT ++ C+ + ++ +G+Q+H ++++S + S N LI MY+
Sbjct: 477 HFSKLIMSKLKPSTFTLSIVLSICANISTLDIGKQIHGYILRSGNSSETSLCNGLITMYS 536
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + + F+ + +D+ SW S+I+A+++ G EA+ F M + P++ F
Sbjct: 537 KCGLLGWSLRTFNVMIERDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPSIMPDQATFT 596
Query: 243 SVFSACSN 250
++ SACS+
Sbjct: 597 TILSACSH 604
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 15/220 (6%)
Query: 350 LCNALLVFKELGKNA--DSVSWNSIIAACLQHNQAEELFRLFSRMLASQ---IKPDHITF 404
L +A+ K + ++A D + +N ++A + ++ + +LF+++ +S IKPDH
Sbjct: 4 LQHAMNSLKTIAESASQDLLEYNRLLAELKRSSRYIDSLQLFTQIHSSHCFNIKPDHYNL 63
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
+ + CA + +QLH Y ++GL F V N ++ +Y K S ++ F +E
Sbjct: 64 STTLAVCANFRDIAFGSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEK 123
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
PDV SW++L+ + G + A ++F M N+ ++T + GL ++
Sbjct: 124 PDVYSWTTLLSACTKMGHIEYASEMFDIMP----KGNVACWNAMITGSAESGLDWVAMNT 179
Query: 525 YRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
+ M ++ G+ P +C++ L C E ED Q+
Sbjct: 180 FYEM-HKMGVKPDNYSFACILSL-----CTKEIEDLGRQV 213
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 160/581 (27%), Positives = 285/581 (49%), Gaps = 42/581 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ +C++L ++ LGR VH D+ + + ++ MY G L DAR FD M
Sbjct: 148 TFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGM 207
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R+ V W M+ G + + A++L+ M SG P T + + + G
Sbjct: 208 AERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGV 267
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
QLH +K S + N L++MY K + D +F + R D+ +W MI+ + G
Sbjct: 268 QLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNG 327
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+ +AL F +M G +P+ S+ A ++
Sbjct: 328 FVDQALLLFCDMQKSG-IRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLV 386
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A+ +++ + D+ + +I+G + + EA+ +F + ++ +
Sbjct: 387 SALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIR 446
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P+ + + S+L AC + G ++HSY +K ++ V +A++ MYAKC L + +
Sbjct: 447 PNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYI 506
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F ++ D V+WNS+I++ Q+ + EE LF M +K ++T + V+ ACA + +
Sbjct: 507 FSKISAK-DEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPA 565
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
+ ++H + K + D+F + L+D+Y KCG+L A ++F M + VSW+S+I
Sbjct: 566 IYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIAS 625
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y +G E++ L M+ G + VT + +++AC+H G V+EGL L+R M EY I P
Sbjct: 626 YGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAP 685
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
EH +C+VDL +RAG + +A + I M D +W +LL
Sbjct: 686 RMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALL 726
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 156/589 (26%), Positives = 270/589 (45%), Gaps = 56/589 (9%)
Query: 40 GLISACSSLRSLQLGRKVHDHILLSKCQP-DVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
++ C S L LG +VH + + D LQ ++ MY DA F +P+
Sbjct: 44 AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPR 103
Query: 99 RNV---VSWTAMIAGCSQNYQENDAIKLYIQML--QSGVMPGQFTFGSIIKACSGLGSVC 153
+ W +I G + A+ Y++M S +P TF ++K+C+ LG++
Sbjct: 104 GAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIA 163
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
LGR +H + +ALI MY + DAR VF G+A +D W M+ +
Sbjct: 164 LGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYV 223
Query: 214 KLGYELEALCHFNEMLHHGAYQPN---------------EFIFG---------------- 242
K G A+ F +M G +PN + FG
Sbjct: 224 KAGSVSSAVELFGDMRASGC-EPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEV 282
Query: 243 -------SVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
S+++ C + LF + DL +WN +I+G + ++A+ LF +M+
Sbjct: 283 AVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKS 342
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ PD +T+ SLL A QG ++H YI++ +V + +A++ +Y KC + A
Sbjct: 343 GIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMA 402
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
V+ K D V +++I+ + + ++E ++F +L I+P+ + V+ ACA
Sbjct: 403 QSVYDS-SKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACAS 461
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
MA++++ +LH Y K +V + LMD+Y KCG L + +F+ + D V+W+S+
Sbjct: 462 MAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSM 521
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I +AQ G +EAL LF M GV + VT+ VL+AC+ + + G ++ ++
Sbjct: 522 ISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKG-- 579
Query: 534 IIPTREHC---SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P R S ++D+ + G + A M + + V W S++AS
Sbjct: 580 --PIRADLFAESALIDMYGKCGNLEWAHRVFESMP-EKNEVSWNSIIAS 625
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 225/481 (46%), Gaps = 44/481 (9%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T A +S ++ L G ++H + + +V + N +++MY KC L+D F
Sbjct: 248 ATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGL 307
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP+ ++V+W MI+GC QN + A+ L+ M +SG+ P T S++ A + L G
Sbjct: 308 MPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQG 367
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
++LH +++++ + +AL+ +Y K + A++V+ DV +MI+ +
Sbjct: 368 KELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLN 427
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------------------- 254
G EA+ F +L G +PN SV AC++ A +
Sbjct: 428 GMSQEAVKMFRYLLEQG-IRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYV 486
Query: 255 -------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+F++I + D +WN++I+ A + EA++LF EM +
Sbjct: 487 ESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGV 546
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
+T+ S+L AC +Y G ++H +IK +++ +A++ MY KC L A
Sbjct: 547 KYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHR 606
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF+ + + + VSWNSIIA+ + +E L M K DH+TF ++ ACA
Sbjct: 607 VFESMPEK-NEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAG 665
Query: 416 SLEMVTQL-HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSL 473
++ +L C + +A + ++D+Y + G L A +L M PD W +L
Sbjct: 666 QVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGAL 725
Query: 474 I 474
+
Sbjct: 726 L 726
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 198/434 (45%), Gaps = 50/434 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + ++AL+ + + IR T L+ A + L G+++H +I+
Sbjct: 317 NGMISGCVQNGFVDQALLLF-CDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIV 375
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ DV L + ++++Y KC ++ A+ +D +VV + MI+G N +A+K
Sbjct: 376 RNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVK 435
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ +L+ G+ P S++ AC+ + ++ LG++LH++ +K+ + ++AL+ MY
Sbjct: 436 MFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYA 495
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K R+ + +FS I+ KD +W SMI++F++ G EAL F EM G N I
Sbjct: 496 KCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTI-S 554
Query: 243 SVFSACSNFARI----------------------------------------LFNEIDSP 262
SV SAC++ I +F +
Sbjct: 555 SVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEK 614
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+ SWN++IA ++ E++SL M++ D +T +L+ AC + +G+++
Sbjct: 615 NEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLF 674
Query: 323 SYII-KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
+ + + ++ +Y++ L A+ + ++ D+ W +++ AC H
Sbjct: 675 RCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRN 734
Query: 382 AE-------ELFRL 388
E ELF+L
Sbjct: 735 VELAEIASQELFKL 748
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 132/292 (45%), Gaps = 14/292 (4%)
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD-SNVPVCNAILTMYAKCSVL 350
DR LL ++L C+ L G+QVH + G ++ + ++ MY
Sbjct: 39 DRRLL-------AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRF 91
Query: 351 CNALLVFKELGKNADS--VSWNSIIAACLQHNQAEELFRLFSRMLA--SQIKPDHITFND 406
+A+ VF L + A + + WN +I + +M A S PD TF
Sbjct: 92 RDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPY 151
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
V+ +CA + ++ + +H GL D+FV + L+ +Y G L AR++F+ M D
Sbjct: 152 VVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERD 211
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
V W+ ++ GY + G A++LF MR+ G PN TL L+ + + G+ L+
Sbjct: 212 CVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLH- 270
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +YG+ + +V + A+ C+ + M D D+V W +++
Sbjct: 271 TLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRD-DLVTWNGMIS 321
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 160/581 (27%), Positives = 285/581 (49%), Gaps = 42/581 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ +C++L ++ LGR VH D+ + + ++ MY G L DAR FD M
Sbjct: 148 TFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGM 207
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R+ V W M+ G + + A++L+ M SG P T + + + G
Sbjct: 208 AERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGV 267
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
QLH +K S + N L++MY K + D +F + R D+ +W MI+ + G
Sbjct: 268 QLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNG 327
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+ +AL F +M G +P+ S+ A ++
Sbjct: 328 FVDQALLLFCDMQKSG-IRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLV 386
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A+ +++ + D+ + +I+G + + EA+ +F + ++ +
Sbjct: 387 SALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIR 446
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P+ + + S+L AC + G ++HSY +K ++ V +A++ MYAKC L + +
Sbjct: 447 PNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYI 506
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F ++ D V+WNS+I++ Q+ + EE LF M +K ++T + V+ ACA + +
Sbjct: 507 FSKISAK-DEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPA 565
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
+ ++H + K + D+F + L+D+Y KCG+L A ++F M + VSW+S+I
Sbjct: 566 IYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIAS 625
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y +G E++ L M+ G + VT + +++AC+H G V+EGL L+R M EY I P
Sbjct: 626 YGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAP 685
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
EH +C+VDL +RAG + +A + I M D +W +LL
Sbjct: 686 RMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALL 726
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 156/589 (26%), Positives = 270/589 (45%), Gaps = 56/589 (9%)
Query: 40 GLISACSSLRSLQLGRKVHDHILLSKCQP-DVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
++ C S L LG +VH + + D LQ ++ MY DA F +P+
Sbjct: 44 AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPR 103
Query: 99 RNV---VSWTAMIAGCSQNYQENDAIKLYIQML--QSGVMPGQFTFGSIIKACSGLGSVC 153
+ W +I G + A+ Y++M S +P TF ++K+C+ LG++
Sbjct: 104 GAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIA 163
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
LGR +H + +ALI MY + DAR VF G+A +D W M+ +
Sbjct: 164 LGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYV 223
Query: 214 KLGYELEALCHFNEMLHHGAYQPN---------------EFIFG---------------- 242
K G A+ F +M G +PN + FG
Sbjct: 224 KAGSVSSAVELFGDMRASGC-EPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEV 282
Query: 243 -------SVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
S+++ C + LF + DL +WN +I+G + ++A+ LF +M+
Sbjct: 283 AVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKS 342
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ PD +T+ SLL A QG ++H YI++ +V + +A++ +Y KC + A
Sbjct: 343 GIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMA 402
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
V+ K D V +++I+ + + ++E ++F +L I+P+ + V+ ACA
Sbjct: 403 QSVYDS-SKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACAS 461
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
MA++++ +LH Y K +V + LMD+Y KCG L + +F+ + D V+W+S+
Sbjct: 462 MAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSM 521
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I +AQ G +EAL LF M GV + VT+ VL+AC+ + + G ++ ++
Sbjct: 522 ISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKG-- 579
Query: 534 IIPTREHC---SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P R S ++D+ + G + A M + + V W S++AS
Sbjct: 580 --PIRADLFAESALIDMYGKCGNLEWAHRVFESMP-EKNEVSWNSIIAS 625
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 225/481 (46%), Gaps = 44/481 (9%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T A +S ++ L G ++H + + +V + N +++MY KC L+D F
Sbjct: 248 ATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGL 307
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP+ ++V+W MI+GC QN + A+ L+ M +SG+ P T S++ A + L G
Sbjct: 308 MPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQG 367
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
++LH +++++ + +AL+ +Y K + A++V+ DV +MI+ +
Sbjct: 368 KELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLN 427
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------------------- 254
G EA+ F +L G +PN SV AC++ A +
Sbjct: 428 GMSQEAVKMFRYLLEQG-IRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYV 486
Query: 255 -------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+F++I + D +WN++I+ A + EA++LF EM +
Sbjct: 487 ESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGV 546
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
+T+ S+L AC +Y G ++H +IK +++ +A++ MY KC L A
Sbjct: 547 KYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHR 606
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF+ + + + VSWNSIIA+ + +E L M K DH+TF ++ ACA
Sbjct: 607 VFESMPEK-NEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAG 665
Query: 416 SLEMVTQL-HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSL 473
++ +L C + +A + ++D+Y + G L A +L M PD W +L
Sbjct: 666 QVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGAL 725
Query: 474 I 474
+
Sbjct: 726 L 726
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 198/434 (45%), Gaps = 50/434 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + ++AL+ + + IR T L+ A + L G+++H +I+
Sbjct: 317 NGMISGCVQNGFVDQALLLF-CDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIV 375
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ DV L + ++++Y KC ++ A+ +D +VV + MI+G N +A+K
Sbjct: 376 RNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVK 435
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ +L+ G+ P S++ AC+ + ++ LG++LH++ +K+ + ++AL+ MY
Sbjct: 436 MFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYA 495
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K R+ + +FS I+ KD +W SMI++F++ G EAL F EM G N I
Sbjct: 496 KCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTI-S 554
Query: 243 SVFSACSNFARI----------------------------------------LFNEIDSP 262
SV SAC++ I +F +
Sbjct: 555 SVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEK 614
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+ SWN++IA ++ E++SL M++ D +T +L+ AC + +G+++
Sbjct: 615 NEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLF 674
Query: 323 SYII-KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
+ + + ++ +Y++ L A+ + ++ D+ W +++ AC H
Sbjct: 675 RCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRN 734
Query: 382 AE-------ELFRL 388
E ELF+L
Sbjct: 735 VELAEIASQELFKL 748
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 132/292 (45%), Gaps = 14/292 (4%)
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD-SNVPVCNAILTMYAKCSVL 350
DR LL ++L C+ L G+QVH + G ++ + ++ MY
Sbjct: 39 DRRLL-------AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRF 91
Query: 351 CNALLVFKELGKNADS--VSWNSIIAACLQHNQAEELFRLFSRMLA--SQIKPDHITFND 406
+A+ VF L + A + + WN +I + +M A S PD TF
Sbjct: 92 RDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPY 151
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
V+ +CA + ++ + +H GL D+FV + L+ +Y G L AR++F+ M D
Sbjct: 152 VVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERD 211
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
V W+ ++ GY + G A++LF MR+ G PN TL L+ + + G+ L+
Sbjct: 212 CVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLH- 270
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +YG+ + +V + A+ C+ + M D D+V W +++
Sbjct: 271 TLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRD-DLVTWNGMIS 321
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 276/531 (51%), Gaps = 47/531 (8%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FD+ PQ+ + ++ S+N Q +A+ L++ + +SG + ++K C L
Sbjct: 49 FDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDR 108
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
+G+Q+H IK + +L+ MY K + + D VF + K+V SW S++A +
Sbjct: 109 IVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGY 168
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS----------------------- 249
+ G +AL F++M G +PN F F +V +
Sbjct: 169 RQNGLNEQALKLFSQMQLEG-IKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227
Query: 250 -----------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
+ A+ +F+ +++ + SWN++IAG ++ EA LF MR
Sbjct: 228 IFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287
Query: 293 R--ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+L LCA I ++ + Q+H +IK G D ++ + A++ Y+KCS +
Sbjct: 288 EGVKLTQTIFATVIKLCANIKEMSFAK--QLHCQVIKNGSDFDLNIKTALMVAYSKCSEI 345
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ-IKPDHITFNDVMG 409
+A +F + + VSW +II+ +Q+ + + LF +M + ++P+ TF+ V+
Sbjct: 346 DDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLN 405
Query: 410 ACA-KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
ACA AS+E Q H K+G + + V + L+ +Y K G++ SA ++F + D+V
Sbjct: 406 ACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLV 465
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
SW+S+I GYAQ GCG ++LK+F MRS + + +T +GV++AC+H GLV EG + +M
Sbjct: 466 SWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLM 525
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+Y I+PT EH SC+VDL +RAG + +A D IN+M A +W++LLA+
Sbjct: 526 VKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAA 576
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 158/533 (29%), Positives = 249/533 (46%), Gaps = 81/533 (15%)
Query: 11 KQNLYNEALVAYDFSQNNTN---------IRIRPSTYAG-----LISACSSLRSLQLGRK 56
+Q L + ++FS+N+ N +R S G ++ C L +G++
Sbjct: 54 QQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQ 113
Query: 57 VHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQ 116
VH + DV + +++MY K S+ED FD+M +NVVSWT+++AG QN
Sbjct: 114 VHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGL 173
Query: 117 ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA 176
A+KL+ QM G+ P FTF +++ + G+V G Q+H VIKS S + N+
Sbjct: 174 NEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNS 233
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
++ MY+K + DA+ VF + ++ SW SMIA F G +LEA F M G +
Sbjct: 234 MVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGV-KL 292
Query: 237 NEFIFGSVFSACSNFARILF------------------------------NEIDSP---- 262
+ IF +V C+N + F +EID
Sbjct: 293 TQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLF 352
Query: 263 -------DLASWNALIAGVASHSNANEAMSLFSEMRDRE-LLPDGLTVHSLLCACIGRL- 313
++ SW A+I+G + + AM+LF +MR E + P+ T S+L AC
Sbjct: 353 CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTA 412
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
++ QG Q HS IK GF + + V +A++TMYAK + +A VFK + D VSWNS+I
Sbjct: 413 SVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKR-QVDRDLVSWNSMI 471
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
+ QH ++ ++F M + ++ D ITF V+ AC +V + Y
Sbjct: 472 SGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAG---LVNEGQRY------- 521
Query: 434 FDVFVMNG-----------LMDIYIKCGSLGSARKLFNFMENPDVVS-WSSLI 474
FD+ V + ++D+Y + G L A L N M P + W +L+
Sbjct: 522 FDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLL 574
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 196/416 (47%), Gaps = 51/416 (12%)
Query: 11 KQNLYNEALVAYDFSQNN-TNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
+QN NE + FSQ I+ P T+A ++ ++ +++ G +VH ++ S
Sbjct: 169 RQNGLNEQALKL-FSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
+ + N ++NMY K + DA+ FD M RN VSW +MIAG N + +A +L+ +M
Sbjct: 228 IFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD 189
GV Q F ++IK C+ + + +QLH VIK+ L + AL+ Y+K I D
Sbjct: 288 EGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDD 347
Query: 190 ARNVFSGI-ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
A +F + ++V SW ++I+ + + G A+ F +M +PNEF F SV +AC
Sbjct: 348 AFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNAC 407
Query: 249 -------------------SNFARIL----------------------FNEIDSPDLASW 267
S F+ L F DL SW
Sbjct: 408 AAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSW 467
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
N++I+G A H +++ +F EMR + L DG+T ++ AC + +G + ++K
Sbjct: 468 NSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVK 527
Query: 328 MGFDSN-VPVC---NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
D + VP + ++ +Y++ +L A+ + ++ A + W +++AAC H
Sbjct: 528 ---DYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH 580
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 135/261 (51%), Gaps = 1/261 (0%)
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
LF+E L+ N L+ + + EA++LF +R DG ++ +L C
Sbjct: 48 LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
G QVH IK GF +V V +++ MY K + + VF E+ + + VSW S++A
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEM-RVKNVVSWTSLLA 166
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
Q+ E+ +LFS+M IKP+ TF V+G A ++E Q+H + K+GL
Sbjct: 167 GYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDS 226
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
+FV N ++++Y K + A+ +F+ MEN + VSW+S+I G+ G EA +LF RMR
Sbjct: 227 TIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMR 286
Query: 495 SLGVSPNLVTLVGVLTACSHV 515
GV V+ C+++
Sbjct: 287 LEGVKLTQTIFATVIKLCANI 307
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 187/594 (31%), Positives = 302/594 (50%), Gaps = 66/594 (11%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDKM- 96
A L+++ + L+LGR +H +L S+ D V+ N +L MY KCG++E AR FD+M
Sbjct: 44 AKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMC 103
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG------LG 150
R++VSWTAM + ++N E ++++L +ML+ G+ P FT + +AC G
Sbjct: 104 GVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAG 163
Query: 151 SVCLGRQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
V LG V+K+ G+ + ALI M+ + ++ A+ VF G+ + W +I
Sbjct: 164 GVVLG-----FVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLI 218
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------ 251
+ + G + + F ML G ++P+ + S+ SAC+
Sbjct: 219 TRYVQAGCASKVVELFLHMLDDG-FEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGL 277
Query: 252 -------------------------ARILFNEIDSPDLASWNALIAG-VASHSNANEAMS 285
AR +F + ++ SW ALI+G V S N M+
Sbjct: 278 VSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMA 337
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
LF EM + + P+ +T +LL AC G Q+H++++K V NA+++MYA
Sbjct: 338 LFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYA 397
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
+ + A F +L + + +S + + + N A S++ TF
Sbjct: 398 ESGCMEEARKAFDQLYET-NILSMSPDVET--ERNNAS----CSSKIEGMDDGVSTFTFA 450
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
++ A A + L +LH K G D + N L+ +Y +CG L A + F+ M++
Sbjct: 451 SLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDH 510
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
+V+SW+S+I G A+ G +AL +F M GV PN VT + VL+ACSHVGLV+EG +
Sbjct: 511 NVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHF 570
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
R M+ ++G++P EH +C+VDLLAR+G V EA FIN+M C AD +VWK+LL++
Sbjct: 571 RSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSA 624
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 218/454 (48%), Gaps = 44/454 (9%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
DV + +++M+ + G L A+ FD + +R V WT +I Q + ++L++ ML
Sbjct: 179 DVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHML 238
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF--DR 186
G P ++ S+I AC+ LGSV LG+QLH+ ++ S L+ MY K +R
Sbjct: 239 DDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMER 298
Query: 187 ILD-ARNVFSGIARKDVTSWGSMIAAFSKLGY-ELEALCHFNEMLHHGAYQPNEFIFGSV 244
++ AR VF + R +V SW ++I+ + + G E + F EML+ + +PN + ++
Sbjct: 299 SMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNE-SIRPNHITYSNL 357
Query: 245 FSACSNF----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
AC+N A +L I ++ NAL++ A EA F ++ +
Sbjct: 358 LKACANLSDQDSGRQIHAHVLKTSIAHVNVVG-NALVSMYAESGCMEEARKAFDQLYETN 416
Query: 295 LL---PD----------------------GLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
+L PD T SLL A L +G ++H+ +K G
Sbjct: 417 ILSMSPDVETERNNASCSSKIEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAG 476
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
F S+ + N++++MYA+C L +A F E+ K+ + +SW SII+ +H A++ +F
Sbjct: 477 FRSDQGISNSLVSMYARCGYLEDACRAFDEM-KDHNVISWTSIISGLAKHGYAKQALSMF 535
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIK 448
M+ + +KP+ +T+ V+ AC+ + ++ + + K GL + ++D+ +
Sbjct: 536 HDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLAR 595
Query: 449 CGSLGSARKLFNFME-NPDVVSWSSLILGYAQFG 481
G + AR+ N M D + W +L+ +G
Sbjct: 596 SGLVEEARQFINEMPCKADALVWKTLLSACRTYG 629
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 189/394 (47%), Gaps = 50/394 (12%)
Query: 35 PSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCG---SLEDA 89
P Y+ +ISAC+ L S++LG+++H L D + +++MY K S+E A
Sbjct: 244 PDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHA 303
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQN-YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
R F MP+ NV+SWTA+I+G Q+ QEN+ + L+ +ML + P T+ +++KAC+
Sbjct: 304 RKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACAN 363
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS---- 204
L GRQ+HAHV+K+ + NAL++MY + + +AR F + ++ S
Sbjct: 364 LSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPD 423
Query: 205 -------------------------WGSMIAAFSKLGYELEALCHFNEMLH----HGAYQ 235
+ S+++A + +G L + LH ++
Sbjct: 424 VETERNNASCSSKIEGMDDGVSTFTFASLLSAAASVG-----LLTKGQKLHALSMKAGFR 478
Query: 236 PNEFIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
++ I S+ S + + F+E+ ++ SW ++I+G+A H A +A+S+F +M
Sbjct: 479 SDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDM 538
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
+ P+ +T ++L AC + +G + S G + I+ + A+ +
Sbjct: 539 ILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGL 598
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ A E+ AD++ W ++++AC + E
Sbjct: 599 VEEARQFINEMPCKADALVWKTLLSACRTYGNTE 632
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 158/319 (49%), Gaps = 32/319 (10%)
Query: 5 YVSSLCKQN----LYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDH 60
YV S ++N L+ E L N +IR TY+ L+ AC++L GR++H H
Sbjct: 325 YVQSGVQENNVMALFREML--------NESIRPNHITYSNLLKACANLSDQDSGRQIHAH 376
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+L + V+ N +++MY + G +E+AR FD++ + N++S + + + + N +
Sbjct: 377 VLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDV----ETERNNAS 432
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
I+ + GV FTF S++ A + +G + G++LHA +K+ S N+L++M
Sbjct: 433 CSSKIEGMDDGV--STFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSM 490
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y + + DA F + +V SW S+I+ +K GY +AL F++M+ G +PN+
Sbjct: 491 YARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGV-KPNDVT 549
Query: 241 FGSVFSACSNFARIL-----FNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEM 290
+ +V SACS+ + F + P + + ++ +A EA +EM
Sbjct: 550 YIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEM 609
Query: 291 RDRELLPDGLTVHSLLCAC 309
+ D L +LL AC
Sbjct: 610 PCK---ADALVWKTLLSAC 625
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 174/593 (29%), Positives = 300/593 (50%), Gaps = 51/593 (8%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD---VVLQNHILNMYGKCGSLE 87
+ + +T + ++ AC S+ LG ++H L KC D V +++MY KCGS+
Sbjct: 95 VLVDSATLSCVLKACRSVPDRVLGEQLH--CLCVKCGHDRGEVSAGTSLVDMYMKCGSVC 152
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
+ F+ MP++NVV+WT+++ GC+ ++ + L+ +M G+ P FTF S++ A +
Sbjct: 153 EGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVA 212
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
G++ LG+++HA +K S + N+L+ MY K + DA++VF+ + +D+ SW +
Sbjct: 213 SQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNT 272
Query: 208 MIAAFSKLGYELEALCHFNE-----------------------------------MLHHG 232
++A ELEAL F+E +L HG
Sbjct: 273 LMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHG 332
Query: 233 AYQPNEFI--FGSVFSACSNFA---RILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
+ + +S C A I S ++ SW A+I+G + + A+ LF
Sbjct: 333 FHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLF 392
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
S MR+ ++P+ T ++L A + L Q+H+ +IK + V A+L Y+K
Sbjct: 393 SRMREDRVMPNEFTYSAMLKASLSILP----PQIHAQVIKTNYQHIPFVGTALLASYSKF 448
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
+AL +FK + + D V+W+++++ Q E LF++M IKP+ T + V
Sbjct: 449 GSTEDALSIFKMI-EQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSV 507
Query: 408 MGACA-KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
+ ACA A ++ Q H K + V + L+ +Y + G++ SA+ +F + D
Sbjct: 508 IDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRD 567
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
+VSW+S+I GYAQ G +A++ F +M + G+ + VT + V+ C+H GLV EG +
Sbjct: 568 LVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFD 627
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M ++ I PT EH +C+VDL +RAG + E I M A +VW++LL +
Sbjct: 628 SMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGA 680
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 144/540 (26%), Positives = 244/540 (45%), Gaps = 64/540 (11%)
Query: 89 ARMGFDKMPQRNV-VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
AR D++P+R+ V ++ ++ + + + + GV+ T ++KAC
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 148 GLGSVCLGRQLHAHVIKSEHG-SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
+ LG QLH +K H + A +L+ MY K + + VF G+ +K+V +W
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA------------------- 247
S++ + E + F M G + PN F F SV SA
Sbjct: 171 SLLTGCAHAQMHSEVMALFFRMRAEGIW-PNPFTFASVLSAVASQGALDLGQRVHAQSVK 229
Query: 248 ---------CSNF------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
C++ A+ +FN +++ D+ SWN L+AG+ + EA+ L
Sbjct: 230 FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQL 289
Query: 287 FSEMRDR--ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
F E R ++ LCA + +L L + Q+HS ++K GF V A+ Y
Sbjct: 290 FHESRATMGKMTQSTYATVIKLCANLKQLALAR--QLHSCVLKHGFHLTGNVMTALADAY 347
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
+KC L +AL +F + + VSW +II+ C+Q+ LFSRM ++ P+ T+
Sbjct: 348 SKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTY 407
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
+ ++ A + + Q+H + KT FV L+ Y K GS A +F +E
Sbjct: 408 SAMLKASLSI----LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQ 463
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS-HVGLVEEGLH 523
DVV+WS+++ +AQ G + A LF +M G+ PN T+ V+ AC+ V++G
Sbjct: 464 KDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQ 523
Query: 524 LYRIMENEYGIIPTREH-----CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ I I R H S +V + +R G + A+ + + D D+V W S+++
Sbjct: 524 FHAIS------IKYRYHDAICVSSALVSMYSRKGNIDSAQ-IVFERQTDRDLVSWNSMIS 576
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 143/518 (27%), Positives = 243/518 (46%), Gaps = 68/518 (13%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
C + ++A F I P T+A ++SA +S +L LG++VH + C+
Sbjct: 176 CAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSS 235
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
V + N ++NMY KCG +EDA+ F+ M R++VSW ++AG N E +A++L+ +
Sbjct: 236 VFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRA 295
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ--NALIAMYTKFDRI 187
+ Q T+ ++IK C+ L + L RQLH+ V+K HG HL AL Y+K +
Sbjct: 296 TMGKMTQSTYATVIKLCANLKQLALARQLHSCVLK--HGFHLTGNVMTALADAYSKCGEL 353
Query: 188 LDARNVFS-GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
DA N+FS ++V SW ++I+ + G A+ F+ M PNEF + ++
Sbjct: 354 ADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRM-REDRVMPNEFTYSAMLK 412
Query: 247 AC--------------SNFARI----------------------LFNEIDSPDLASWNAL 270
A +N+ I +F I+ D+ +W+A+
Sbjct: 413 ASLSILPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAM 472
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL--CACIGRLTLYQGMQVHSYIIKM 328
++ A + A LF++M + + P+ T+ S++ CAC + QG Q H+ IK
Sbjct: 473 LSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPS-AGVDQGRQFHAISIKY 531
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
+ + V +A+++MY++ + +A +VF E + D VSWNS+I+ QH + +
Sbjct: 532 RYHDAICVSSALVSMYSRKGNIDSAQIVF-ERQTDRDLVSWNSMISGYAQHGYSMKAIET 590
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG------- 441
F +M AS I+ D +TF V+ C +V + Y FD V +
Sbjct: 591 FRQMEASGIQMDGVTFLAVIMGCTHNG---LVVEGQQY-------FDSMVRDHKINPTME 640
Query: 442 ----LMDIYIKCGSLGSARKLFNFMENP-DVVSWSSLI 474
++D+Y + G L L M P + W +L+
Sbjct: 641 HYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLL 678
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 204/441 (46%), Gaps = 52/441 (11%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
++ STYA +I C++L+ L L R++H +L + + + Y KCG L DA
Sbjct: 299 KMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALN 358
Query: 92 GFD-KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F RNVVSWTA+I+GC QN A+ L+ +M + VMP +FT+ +++KA +
Sbjct: 359 IFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI- 417
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
L Q+HA VIK+ + AL+A Y+KF DA ++F I +KDV +W +M++
Sbjct: 418 ---LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLS 474
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------- 249
++ G A FN+M G +PNEF SV AC+
Sbjct: 475 CHAQAGDCEGATYLFNKMAIQG-IKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRY 533
Query: 250 --------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
+ A+I+F DL SWN++I+G A H + +A+ F +
Sbjct: 534 HDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQ 593
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCS 348
M + DG+T +++ C + +G Q +++ + + ++ +Y++
Sbjct: 594 MEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAG 653
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF---N 405
L + + +++ A ++ W +++ AC H EL + + L S D T+ +
Sbjct: 654 KLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNV-ELGKFSADKLLSLEPHDSSTYVLLS 712
Query: 406 DVMGACAKMASLEMVTQLHCY 426
++ A K + V +L Y
Sbjct: 713 NIYAAAGKWKERDEVRKLMDY 733
>gi|302817788|ref|XP_002990569.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
gi|300141737|gb|EFJ08446.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
Length = 564
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 167/536 (31%), Positives = 263/536 (49%), Gaps = 46/536 (8%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ-SGVMPGQF 137
MYGKCGS+E+AR F+ + + + SW M+ N + A++L+ QM+ G+ +
Sbjct: 1 MYGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRV 60
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
TF + ACS +GS+ G+Q H+ ++S S LI +AL+ MY + +AR +F I
Sbjct: 61 TFVTAATACSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRI 120
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------- 249
K+V W MIAA+++ G+ EAL E+ + +P+ F +V AC+
Sbjct: 121 PVKNVVCWNVMIAAYAQNGHFSEAL----ELYYDMNLKPDRVTFLNVLHACTLESGRLIH 176
Query: 250 ----------------------------NFARILFNEIDSPDLASWNALIAGVASHSNAN 281
+ A+ +F+ I D+ SWNAL++ +
Sbjct: 177 QDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYIQQGHRK 236
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
EA LF M L P+ +T SLL AC +L Q ++H + G + + V N ++
Sbjct: 237 EAFELFKRMDKAGLQPNSVTYLSLLPACS---SLEQLREIHQELADQGLEQDEQVGNTLI 293
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
T Y K S L +++ VF+ + K VSW +I ++H L+ M+ ++PD
Sbjct: 294 TAYNKFS-LEDSVAVFERM-KRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEGVRPDA 351
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
+ + AC + +L ++H + T + DVFV ++++Y KCG A +F
Sbjct: 352 VALVCALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEAEAVFQG 411
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
M+ V +W+SLI YAQ G +ALKL+ RM G P+ VTL+ L ACSH+GL++
Sbjct: 412 MKTTTVATWNSLIGAYAQHGHATDALKLYERMELSGTRPDGVTLLCALFACSHLGLLDRA 471
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
Y M +Y + H C+VDL RAG + EAE+ I M I W +LL
Sbjct: 472 REFYSGMVEDYQVEAVPAHFGCLVDLFCRAGWIDEAEELIASMPVRPHISAWTALL 527
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 240/510 (47%), Gaps = 47/510 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + + C ++AL + + IR T+ +ACS + SL+ G++ H +
Sbjct: 27 NLMLGAYCNNGSGDQALELFKQMVDVHGIRADRVTFVTAATACSLVGSLEEGKQFHSRFV 86
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S + ++L + ++NMYG+CGS E+AR FD++P +NVV W MIA +QN ++A++
Sbjct: 87 ESGLESSLILDSALMNMYGRCGSAEEARKIFDRIPVKNVVCWNVMIAAYAQNGHFSEALE 146
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
LY M + P + TF +++ AC+ L S GR +H V+ + NAL+ M+
Sbjct: 147 LYYDM---NLKPDRVTFLNVLHACT-LES---GRLIHQDVVSAGLERDKFVGNALVNMFG 199
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + DA+ VF IA +DV SW ++++ + + G+ EA F M G QPN +
Sbjct: 200 KCGSLSDAKRVFDRIAFRDVISWNALMSVYIQQGHRKEAFELFKRMDKAG-LQPNSVTYL 258
Query: 243 SVFSACSNFARI------------------------------------LFNEIDSPDLAS 266
S+ ACS+ ++ +F + + S
Sbjct: 259 SLLPACSSLEQLREIHQELADQGLEQDEQVGNTLITAYNKFSLEDSVAVFERMKRRSVVS 318
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
W +I G+ H A+ L+ EM + PD + + L AC L +G ++H +
Sbjct: 319 WTCMIMGMVEHGYGGRALDLYREMVVEGVRPDAVALVCALDACTSVENLAEGRKIHRLVE 378
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
++V V A++ MY KC A VF+ + K +WNS+I A QH A +
Sbjct: 379 GTTMVTDVFVATAVVNMYGKCGKFAEAEAVFQGM-KTTTVATWNSLIGAYAQHGHATDAL 437
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG-LMDI 445
+L+ RM S +PD +T + AC+ + L+ + + + + V G L+D+
Sbjct: 438 KLYERMELSGTRPDGVTLLCALFACSHLGLLDRAREFYSGMVEDYQVEAVPAHFGCLVDL 497
Query: 446 YIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
+ + G + A +L M P + +W++L+
Sbjct: 498 FCRAGWIDEAEELIASMPVRPHISAWTALL 527
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 188/422 (44%), Gaps = 54/422 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +++ + ++EAL Y + N++ T+ ++ AC+ L+ GR +H ++
Sbjct: 129 NVMIAAYAQNGHFSEALELY----YDMNLKPDRVTFLNVLHACT----LESGRLIHQDVV 180
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + D + N ++NM+GKCGSL DA+ FD++ R+V+SW A+++ Q +A +
Sbjct: 181 SAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYIQQGHRKEAFE 240
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ +M ++G+ P T+ S++ ACS L + R++H + N LI Y
Sbjct: 241 LFKRMDKAGLQPNSVTYLSLLPACSSLEQL---REIHQELADQGLEQDEQVGNTLITAYN 297
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
KF + D+ VF + R+ V SW MI + GY AL + EM+ G +P+
Sbjct: 298 KFS-LEDSVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEGV-RPDAVALV 355
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
AC++ A +F + +
Sbjct: 356 CALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEAEAVFQGMKTT 415
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+A+WN+LI A H +A +A+ L+ M PDG+T+ L AC L + + +
Sbjct: 416 TVATWNSLIGAYAQHGHATDALKLYERMELSGTRPDGVTLLCALFACSHLGLLDRAREFY 475
Query: 323 SYIIKMGFDSNVPV-CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
S +++ VP ++ ++ + + A + + +W +++ AC HN
Sbjct: 476 SGMVEDYQVEAVPAHFGCLVDLFCRAGWIDEAEELIASMPVRPHISAWTALLNACKAHND 535
Query: 382 AE 383
E
Sbjct: 536 ME 537
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 76/137 (55%), Gaps = 5/137 (3%)
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL-GVSPNLV 503
+Y KCGS+ AR +FN ++ SW+ ++ Y G GD+AL+LF +M + G+ + V
Sbjct: 1 MYGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRV 60
Query: 504 TLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
T V TACS VG +EEG + R +E+ G+ + S ++++ R G EA +
Sbjct: 61 TFVTAATACSLVGSLEEGKQFHSRFVES--GLESSLILDSALMNMYGRCGSAEEARKIFD 118
Query: 563 QMACDADIVVWKSLLAS 579
++ ++V W ++A+
Sbjct: 119 RIPVK-NVVCWNVMIAA 134
>gi|255562697|ref|XP_002522354.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538432|gb|EEF40038.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 704
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 179/587 (30%), Positives = 285/587 (48%), Gaps = 50/587 (8%)
Query: 40 GLISACSSLRSLQLGRKVHDHILLSKCQPDVV----LQNHILNMYGKCGSLEDARMGFDK 95
LI C+++ SL+ R++H IL + L N+++ MY CGS DA+ FD+
Sbjct: 9 ALIKKCTTINSLKKARQLHALILATTASTSYAQSPYLNNNLIAMYAHCGSRSDAQKLFDR 68
Query: 96 MPQRNVVSWTAMIAG-CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
MP++N +S+ A+IA C + E + KL+ M + P TF S+++ C L L
Sbjct: 69 MPRKNAISYNALIAAYCRDSSYETLSFKLFSDMGIQRLRPNGATFTSLLQVCCLLEDWFL 128
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G LH V++ + + + Q L+ MY+ + A VF KD W SMI+ + K
Sbjct: 129 GSTLHGQVLQFGYVNDICVQTMLLGMYSDCGDLESACKVFGYAVEKDDVFWNSMISGYLK 188
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------- 251
E+L F EM+ G +F +ACS
Sbjct: 189 NDRIKESLSLFGEMVRSGTI-FTQFTCSMALNACSKLGYYSQGRIIHAQVIVSNILPDSA 247
Query: 252 -----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
A LF+ I P L SWN++I+ A + +AM LF ++
Sbjct: 248 LQNALLDMYYSCGDRRTALTLFSRIQIPSLISWNSMISWFAKNEEGEKAMGLFVKLLGMS 307
Query: 295 LL-PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
PD T +++ A G +H+ +IK G +V + NA+L+MY + S + A
Sbjct: 308 TCKPDEYTFTAIISATGEFRATDYGQPLHAQVIKAGLQWSVFIGNALLSMYFRNSDVEAA 367
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
VF L + D V W +I + E +LF +M K D + + CA
Sbjct: 368 RGVFS-LMEEKDVVLWTEMIMGHCRLGDGESAIKLFCKMRQEGHKSDSFALSGALSVCAD 426
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+A L+ LH KTG ++ V L+D+Y K G+L +A+ +F+ + NPD+ W+S+
Sbjct: 427 LAILKQGQMLHTQAVKTGCEAEISVCGSLVDMYAKNGNLQAAQLIFSQVCNPDLKCWNSM 486
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I GY+ G +EA+ LF + G++P+ VT + +L+AC+H GLVE+G L+ M+ G
Sbjct: 487 IGGYSHHGMAEEAVMLFAEVLECGLTPDQVTFLSLLSACNHSGLVEKGKFLWDYMKKN-G 545
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD-IVVWKSLLAS 579
I P +H SC+V LL+RAG + EAE+ I + C + + +W++LL+S
Sbjct: 546 ITPGPKHYSCMVSLLSRAGLLDEAEELITESTCSEEHLKLWRTLLSS 592
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 155/574 (27%), Positives = 248/574 (43%), Gaps = 64/574 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRP--STYAGLISACSSLRSLQLGRKVHDH 60
N +++ C+ + Y E L FS R+RP +T+ L+ C L LG +H
Sbjct: 78 NALIAAYCRDSSY-ETLSFKLFSDMGIQ-RLRPNGATFTSLLQVCCLLEDWFLGSTLHGQ 135
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+L D+ +Q +L MY CG LE A F +++ V W +MI+G +N + ++
Sbjct: 136 VLQFGYVNDICVQTMLLGMYSDCGDLESACKVFGYAVEKDDVFWNSMISGYLKNDRIKES 195
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ L+ +M++SG + QFT + ACS LG GR +HA VI S QNAL+ M
Sbjct: 196 LSLFGEMVRSGTIFTQFTCSMALNACSKLGYYSQGRIIHAQVIVSNILPDSALQNALLDM 255
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y A +FS I + SW SMI+ F+K +A+ F ++L +P+E+
Sbjct: 256 YYSCGDRRTALTLFSRIQIPSLISWNSMISWFAKNEEGEKAMGLFVKLLGMSTCKPDEYT 315
Query: 241 FGSVFSACSNF----------------------------------------ARILFNEID 260
F ++ SA F AR +F+ ++
Sbjct: 316 FTAIISATGEFRATDYGQPLHAQVIKAGLQWSVFIGNALLSMYFRNSDVEAARGVFSLME 375
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D+ W +I G + A+ LF +MR D + L C L QG
Sbjct: 376 EKDVVLWTEMIMGHCRLGDGESAIKLFCKMRQEGHKSDSFALSGALSVCADLAILKQGQM 435
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H+ +K G ++ + VC +++ MYAK L A L+F ++ N D WNS+I H
Sbjct: 436 LHTQAVKTGCEAEISVCGSLVDMYAKNGNLQAAQLIFSQVC-NPDLKCWNSMIGGYSHHG 494
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
AEE LF+ +L + PD +TF ++ AC +E L Y+ K G+ +
Sbjct: 495 MAEEAVMLFAEVLECGLTPDQVTFLSLLSACNHSGLVEKGKFLWDYMKKNGITPGPKHYS 554
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
++ + + G L A +L + C +E LKL+ + S V+
Sbjct: 555 CMVSLLSRAGLLDEAEELIT------------------ESTCSEEHLKLWRTLLSSCVNR 596
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
+T VG A + L E Y ++ N Y +
Sbjct: 597 RNLT-VGARAAKQVLRLDPEDSATYILLSNLYAV 629
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 163/564 (28%), Positives = 288/564 (51%), Gaps = 44/564 (7%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+ A + +SL+ G+ +H ++ Q DV + +++++Y C + A+ FD +
Sbjct: 9 LLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPF 68
Query: 101 VVSW-TAMIAGCSQNYQENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+S ++AG ++N ++A+ L+ +++ + P +T+ S++KAC GL V LG+ +
Sbjct: 69 EISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMI 128
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H ++K ++ ++L+ MY K + A +F + KDV W ++I+ + + G
Sbjct: 129 HTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKF 188
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------------ 254
EAL +F M G ++P+ + S+C+ +
Sbjct: 189 EEALRYFGMMRRFG-FEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAA 247
Query: 255 ----------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
+F ++ + + +WN++I G + + LF M + P
Sbjct: 248 LVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPT 307
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
T+ S L AC L +G VH YII+ ++ + ++++ +Y KC + +A +FK
Sbjct: 308 LTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFK 367
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ K +VSWN +I+ + + + RLF M S ++PD ITF V+ AC+++A+LE
Sbjct: 368 LMPKTT-TVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALE 426
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
++H I + L + VM L+D+Y KCG++ A +F + D+VSW+S+I Y
Sbjct: 427 KGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYG 486
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
G EAL+LF M V P+ VT + +L+ACSH GLV++GL+ + M N YGIIP
Sbjct: 487 SHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRI 546
Query: 539 EHCSCVVDLLARAGCVHEAEDFIN 562
EH SC++ LL RAG +HEA + +
Sbjct: 547 EHYSCLITLLGRAGRLHEAYEILQ 570
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 150/576 (26%), Positives = 250/576 (43%), Gaps = 79/576 (13%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + +Y+EAL +D ++ TY ++ AC LR + LG+ +H ++
Sbjct: 74 NGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLV 133
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
D+V+ + ++ MY KC E A FD+MP ++V W +I+ Q+ + +A++
Sbjct: 134 KEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALR 193
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ M + G P T + I +C+ L + GR++H ++ S AL+ MY
Sbjct: 194 YFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYG 253
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA--------- 233
K ++ A VF + K V +W SMI + G + + F M G
Sbjct: 254 KCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTS 313
Query: 234 -------------------------YQPNEFIFGS---VFSACSNF--ARILFNEIDSPD 263
QP+ F+ S ++ C A +F +
Sbjct: 314 TLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTT 373
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
SWN +I+G + +A+ LF EM + PD +T S+L AC L +G ++H+
Sbjct: 374 TVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHN 433
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
I++ +N V A+L MYAKC + A VFK L + D VSW S+I A H +
Sbjct: 434 LIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPER-DLVSWTSMITAYGSHGRVY 492
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE-----------------MVTQLHCY 426
E LF+ ML S +KPD +TF ++ AC+ ++ + C
Sbjct: 493 EALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCL 552
Query: 427 ITKTGL------AFDVFVMNG-LMDIYIKCGSLGSARKLFNFME------------NPDV 467
IT G A+++ N + D + +L SA +L ++ +PD
Sbjct: 553 ITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDD 612
Query: 468 VSWSSLILG--YAQFGCGDEALKLFTRMRSLGVSPN 501
S + +IL YA FG DE + ++M+ LG+ N
Sbjct: 613 SS-TYIILSNMYASFGKWDEVRMVRSKMKDLGLKKN 647
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 180/342 (52%), Gaps = 11/342 (3%)
Query: 243 SVFSACS--NFARILFNEIDSP-DLASWNALIAGVASHSNANEAMSLFSEMRDRELL-PD 298
S++ +C+ ++A+ +F+ I++P +++ N L+AG + +EA+ LF ++ L PD
Sbjct: 46 SLYVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPD 105
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
T S+L AC G + G +H+ ++K G ++ V ++++ MYAKC+ A+ +F
Sbjct: 106 SYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFD 165
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
E+ + D WN++I+ Q + EE R F M +PD +T + +CA++ L+
Sbjct: 166 EM-PDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLD 224
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
++H + +G D FV L+D+Y KCG L A ++F M N VV+W+S+I GY
Sbjct: 225 RGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYG 284
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIP 536
G G ++LF RM S GV P L TL L ACS + EG +H Y I+ N I P
Sbjct: 285 FKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGY-IIRNR--IQP 341
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
S ++DL + G V AE M V W +++
Sbjct: 342 DIFLNSSLMDLYFKCGKVESAETIFKLMP-KTTTVSWNVMIS 382
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 145/289 (50%), Gaps = 10/289 (3%)
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M R+L+P LL A + +L QG +H ++ +G ++V VC ++++Y C++
Sbjct: 1 MDARKLIP-------LLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNL 53
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ-IKPDHITFNDVM 408
A VF + + N ++A ++ +E LF +++ +KPD T+ V+
Sbjct: 54 FDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVL 113
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
AC + + + +H + K GL D+ V + L+ +Y KC A KLF+ M + DV
Sbjct: 114 KACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVA 173
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
W+++I Y Q G +EAL+ F MR G P+ VT+ +++C+ + ++ G +++ +
Sbjct: 174 CWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKEL 233
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
N G + +VD+ + G + A + QM + +V W S++
Sbjct: 234 VNS-GFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMP-NKTVVAWNSMI 280
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 178/586 (30%), Positives = 297/586 (50%), Gaps = 51/586 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP--Q 98
L+ AC +L+LG+ +H ++ S D VL N ++ +Y KCG E+A F M +
Sbjct: 45 LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG---VMPGQFTFGSIIKACSGLGSVCLG 155
R++VSW+A+I+ + N E+ A+ ++ MLQ + P ++ F +++++CS G
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164
Query: 156 RQLHAHVIKSEH-GSHLIAQNALIAMYTKFD-RILDARNVFSGIARKDVTSWGSMIAAFS 213
+ A ++K+ + SH+ ALI M+TK I AR VF + K++ +W MI +S
Sbjct: 165 LAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYS 224
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------- 251
+LG +A+ F +L Y P++F S+ SAC
Sbjct: 225 QLGLLDDAVDLFCRLLV-SEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDV 283
Query: 252 ------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
+R +FN + ++ SW ALI+G EA+ LF M
Sbjct: 284 FVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHG 343
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ P+ T S+L AC G Q+H IK+G + V N+++ MYA+ + A
Sbjct: 344 HVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECA 403
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
F L + + +S+N+ A + ++E F + + + T+ ++ A
Sbjct: 404 RKAFNILFEK-NLISYNTAADANAKALDSDESFN--HEVEHTGVGASPFTYACLLSGAAC 460
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ ++ Q+H I K+G ++ + N L+ +Y KCG+ +A ++FN M +V++W+S+
Sbjct: 461 IGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSI 520
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I G+A+ G +AL+LF M +GV PN VT + VL+ACSHVGL++E + M +
Sbjct: 521 ISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHS 580
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
I P EH +C+VDLL R+G + EA +FIN M DAD +VW++ L S
Sbjct: 581 ISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGS 626
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 184/393 (46%), Gaps = 54/393 (13%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T L+SAC L LG+++H ++ S DV + +++MY K ++E++R F+ M
Sbjct: 250 TLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTM 309
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
NV+SWTA+I+G Q+ QE +AIKL+ ML V P FTF S++KAC+ L +G+
Sbjct: 310 LHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGK 369
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
QLH IK + N+LI MY + + AR F+ + K++ S+ + A +K
Sbjct: 370 QLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAK-- 427
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFG---------------------------------- 242
L++ FN + H + F +
Sbjct: 428 -ALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCIN 486
Query: 243 ----SVFSACSNFARIL--FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
S++S C N L FN++ ++ +W ++I+G A H A +A+ LF EM + +
Sbjct: 487 NALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVK 546
Query: 297 PDGLTVHSLLCAC--IGRLTLYQGMQVHSYIIKMGFDSNV-PVCN---AILTMYAKCSVL 350
P+ +T ++L AC +G + + + M ++ ++ P ++ + + +L
Sbjct: 547 PNEVTYIAVLSACSHVGLID-----EAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLL 601
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
A+ + +AD++ W + + +C H +
Sbjct: 602 LEAIEFINSMPFDADALVWRTFLGSCRVHRNTK 634
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 80/130 (61%)
Query: 21 AYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMY 80
+++ +T + P TYA L+S + + ++ G ++H I+ S ++ + N +++MY
Sbjct: 434 SFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMY 493
Query: 81 GKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFG 140
KCG+ E A F+ M RNV++WT++I+G +++ A++L+ +ML+ GV P + T+
Sbjct: 494 SKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYI 553
Query: 141 SIIKACSGLG 150
+++ ACS +G
Sbjct: 554 AVLSACSHVG 563
>gi|449447569|ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
Length = 712
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/542 (29%), Positives = 275/542 (50%), Gaps = 33/542 (6%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+ +C+ SL G+++H HI+ S D L + ++ Y L +A +
Sbjct: 85 LLVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLPEAHTLVETSNLFR 144
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
SW +I ++ AI Y QM+ GV P FTF SI+KAC ++ G ++H
Sbjct: 145 PCSWNILITSYVKHKLYEAAILAYKQMVSKGVRPDNFTFPSILKACGETQNLKFGLEVHK 204
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+ L NALI+MY + + ARN+F + +D SW SMI+ +S G E
Sbjct: 205 SINSWSTPWSLFVHNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYSSRGMWRE 264
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNA 280
A +F S+ S C ++ +WN + G N
Sbjct: 265 AFE----------------LFESMQSKCLEI-----------NVVTWNIIAGGCLRVGNF 297
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCAC--IGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
+A+ L S+MR+ + D + + L AC IG + L G ++H + I+ V N
Sbjct: 298 TQALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRL--GKEIHGFTIRHYHHMLSTVQN 355
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
A++TMYA+C + +A ++F+ L + ++WNS+++ + EE LF +L ++
Sbjct: 356 ALVTMYARCKDIRHAYMLFR-LNDDKSRITWNSMLSGLTHLGRVEEALCLFRELLLFGVE 414
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD-VFVMNGLMDIYIKCGSLGSARK 457
PD++TF ++ CA++A L+ + HCYITK D + + N L+D+Y + G + A++
Sbjct: 415 PDYVTFASILPLCARVADLQHGREFHCYITKHRDFRDHLLLWNALVDMYARAGKVSEAKR 474
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
+F + D V+++SLI GY G G +A++LF M+ + P+ +T++ VL+ACSH GL
Sbjct: 475 IFYSLSKKDEVTYTSLIAGYGMQGEGGKAVRLFEEMKRFQIKPDHITMIAVLSACSHSGL 534
Query: 518 VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
V + L+ M++ +G+ P EH +C+ DL R G +++A++ I +M +W +L+
Sbjct: 535 VNQAELLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLI 594
Query: 578 AS 579
+
Sbjct: 595 GA 596
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/484 (23%), Positives = 194/484 (40%), Gaps = 97/484 (20%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N ++S K LY A++AY + + +RP T+ ++ AC ++L+ G +VH
Sbjct: 149 NILITSYVKHKLYEAAILAY---KQMVSKGVRPDNFTFPSILKACGETQNLKFGLEVHKS 205
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIA----------- 109
I + + N +++MYG+CG ++ AR FD M +R+ VSW +MI+
Sbjct: 206 INSWSTPWSLFVHNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYSSRGMWREA 265
Query: 110 ------------------------GCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
GC + A+KL QM G+ + A
Sbjct: 266 FELFESMQSKCLEINVVTWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLDDVAMIIGLGA 325
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
CS +G++ LG+++H I+ H QNAL+ MY + I A +F K +W
Sbjct: 326 CSHIGAIRLGKEIHGFTIRHYHHMLSTVQNALVTMYARCKDIRHAYMLFRLNDDKSRITW 385
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------- 254
SM++ + LG EALC F E+L G +P+ F S+ C+ A +
Sbjct: 386 NSMLSGLTHLGRVEEALCLFRELLLFGV-EPDYVTFASILPLCARVADLQHGREFHCYIT 444
Query: 255 ------------------------------LFNEIDSPDLASWNALIAGVASHSNANEAM 284
+F + D ++ +LIAG +A+
Sbjct: 445 KHRDFRDHLLLWNALVDMYARAGKVSEAKRIFYSLSKKDEVTYTSLIAGYGMQGEGGKAV 504
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACI-------GRLTLYQGMQVHSYIIKMGFDSNVPVC 337
LF EM+ ++ PD +T+ ++L AC L + VH G +
Sbjct: 505 RLFEEMKRFQIKPDHITMIAVLSACSHSGLVNQAELLFAEMQSVH------GLSPRLEHY 558
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
+ ++ + +L A + + S W ++I AC H + ++L ++
Sbjct: 559 ACMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLIGACCIHGNMDIGEWAAEKLL--EM 616
Query: 398 KPDH 401
+P+H
Sbjct: 617 RPEH 620
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 147/324 (45%), Gaps = 35/324 (10%)
Query: 237 NEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+EF+ GS+FS+ +F ASH +++ FS ++ R
Sbjct: 35 SEFMIGSIFSSLKDF-----------------------ASHGQLSKSFEAFSLIQLRTSY 71
Query: 297 PDGL-----TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
D ++ LL +C +L G Q+H +II G + + + ++ Y+ L
Sbjct: 72 NDSFDLILQSISILLVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLP 131
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A + E SWN +I + ++H E + +M++ ++PD+ TF ++ AC
Sbjct: 132 EAHTLV-ETSNLFRPCSWNILITSYVKHKLYEAAILAYKQMVSKGVRPDNFTFPSILKAC 190
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ +L+ ++H I + +FV N L+ +Y +CG + +AR LF+ M D VSW+
Sbjct: 191 GETQNLKFGLEVHKSINSWSTPWSLFVHNALISMYGRCGEVDTARNLFDNMLERDAVSWN 250
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
S+I Y+ G EA +LF M+S + N+VT + C VG + L L M N
Sbjct: 251 SMISCYSSRGMWREAFELFESMQSKCLEINVVTWNIIAGGCLRVGNFTQALKLLSQMRN- 309
Query: 532 YGIIPTREHCSCVVDLLARAGCVH 555
+GI H V ++ C H
Sbjct: 310 FGI-----HLDDVAMIIGLGACSH 328
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 155/513 (30%), Positives = 250/513 (48%), Gaps = 42/513 (8%)
Query: 107 MIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE 166
M+ G ++ + + ++++ G P +T +I+AC L ++ +GR +H V K
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
AL+ MY K I DAR +F + +D+ +W MI +++ G E+L F
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 227 EMLHHGAYQPNEFIFGSVFSACSNF----------------------------------- 251
+M G P++ +V AC+
Sbjct: 121 KMREEGVV-PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC 179
Query: 252 -----ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
AR +F+ ++ ++ SW+A+IA H +A+ LF M +LPD +T+ SLL
Sbjct: 180 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 239
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
AC L G +H + K G D + VC A++ MY KC + +A +F ++ + D
Sbjct: 240 YACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPER-DL 298
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
V+W +I + A E LF +M + PD + V+ ACAK+ ++ + Y
Sbjct: 299 VTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDY 358
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
I + DV + ++D++ KCG + SAR++F+ ME +V+SWS++I Y G G +A
Sbjct: 359 IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 418
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
L LF M G+ PN +TLV +L ACSH GLVEEGL + +M +Y + +H +CVVD
Sbjct: 419 LDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVD 478
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
LL RAG + EA I M + D +W + L +
Sbjct: 479 LLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 511
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 233/472 (49%), Gaps = 45/472 (9%)
Query: 34 RPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP Y +I AC L++LQ+GR +H + D + +++MY KC +EDAR
Sbjct: 27 RPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARF 86
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FDKM +R++V+WT MI G ++ + N+++ L+ +M + GV+P + +++ AC+ LG+
Sbjct: 87 LFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGA 146
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ R + ++ + + +I A+I MY K + AR +F + K+V SW +MIAA
Sbjct: 147 MHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAA 206
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
+ G +AL F ML G P++ S+ ACS+
Sbjct: 207 YGYHGQGRKALDLFRMMLSSGML-PDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDL 265
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
AR LF+++ DL +W +I G A NANE++ LF +MR
Sbjct: 266 DHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMR 325
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ ++PD + + +++ AC +++ + YI + F +V + A++ M+AKC +
Sbjct: 326 EEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVE 385
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A +F + + + +SW+++IAA H Q + LF ML S I P+ IT ++ AC
Sbjct: 386 SAREIFDRM-EEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYAC 444
Query: 412 AKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
+ +E + + + + DV ++D+ + G L A KL M
Sbjct: 445 SHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESM 496
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 192/409 (46%), Gaps = 47/409 (11%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQ 73
NE+LV ++ + + P A ++ AC+ L ++ R + D+I K Q DV+L
Sbjct: 113 NESLVLFEKMREEGVV---PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG 169
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
+++MY KCG +E AR FD+M ++NV+SW+AMIA + Q A+ L+ ML SG++
Sbjct: 170 TAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGML 229
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P + T S++ ACS L ++ +GR +H V K AL+ MY K I DAR +
Sbjct: 230 PDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFL 289
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-- 251
F + +D+ +W MI +++ G E+L F++M G P++ +V AC+
Sbjct: 290 FDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVV-PDKVAMVTVVFACAKLGA 348
Query: 252 --------------------------------------ARILFNEIDSPDLASWNALIAG 273
AR +F+ ++ ++ SW+A+IA
Sbjct: 349 MHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAA 408
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDS 332
H +A+ LF M +LP+ +T+ SLL AC + +G++ S + + +
Sbjct: 409 YGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRA 468
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
+V ++ + + L AL + + + D W + + AC H
Sbjct: 469 DVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKD 517
>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 912
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 172/584 (29%), Positives = 288/584 (49%), Gaps = 46/584 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCG--SLEDARMGFD 94
T + + +C +L + G ++H + + + + ++ Y KCG S+E ++
Sbjct: 117 TLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSL 176
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+VVSWT M++ +N + +A ++Y++M++SGV P +FTF ++ A S +
Sbjct: 177 VKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSY 236
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+ LHAH+I +L+ + A++ MY+K R++DA V + DV W ++I+ F++
Sbjct: 237 GKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQ 296
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------ARIL--------- 255
EA+ F +M G PN F + S+ +A S+ +R++
Sbjct: 297 NLQVREAISVFRDMELSGLL-PNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLY 355
Query: 256 ----------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
F EI SP++ W +LIAG A ++ LF+EM+
Sbjct: 356 IGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAE-KRLEDSFQLFAEMQAA 414
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ P+ T+ ++L AC +L M +H +IIK D ++ V NA++ YA ++ A
Sbjct: 415 GVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEA 474
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
V + DS+++ + A Q ++ M IK D + + A A
Sbjct: 475 WSVIGTMNLR-DSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAG 533
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ ++E QLHCY K+G V N L+ +Y KCGS+ A + F + PD SW+ L
Sbjct: 534 LGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGL 593
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I G++ G AL F MR GV P+ +TL+ +++ACSH GL+E GL + M+ EY
Sbjct: 594 ISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYH 653
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
I P +H C+VDLL R G + EA I +M+ D ++ K+LL
Sbjct: 654 ITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLL 697
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 166/583 (28%), Positives = 285/583 (48%), Gaps = 53/583 (9%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++S C+S SL+ G +H I+ Q D+ L N++L++Y K + AR FD+MP R+
Sbjct: 21 VLSFCNS-NSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRD 79
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
VVSWT +++ ++ +DA++L+ M+ SG P +FT S +++C LG G Q+H
Sbjct: 80 VVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHC 139
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRI-LDARNVFSGIAR-KDVTSWGSMIAAFSKLGYE 218
+K + +L+ YTK ++A + S + DV SW +M+++ + G
Sbjct: 140 SAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKW 199
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEI------------------- 259
EA + +M+ G Y PNEF F + A S+F + + ++
Sbjct: 200 GEAFEIYVKMIESGVY-PNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTA 258
Query: 260 ---------------------DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
D+ W LI+G + EA+S+F +M LLP+
Sbjct: 259 VVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPN 318
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS-VLCNALLVF 357
T SLL A L+L G Q HS +I +G + ++ + NA++ MY KCS + NA+ VF
Sbjct: 319 NFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVF 378
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+E+ + + + W S+IA + E+ F+LF+ M A+ ++P+ T + ++GAC+K SL
Sbjct: 379 REI-TSPNVMCWTSLIAG-FAEKRLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSL 436
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
LH +I KT + D+ V N L+D Y G + A + M D ++++ L
Sbjct: 437 VPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARL 496
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGII 535
Q G ALK+ M + G+ + +L L+A + +G +E G LH Y + + G
Sbjct: 497 NQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSV---KSGFQ 553
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +V L ++ G +H+A ++ + D W L++
Sbjct: 554 RCHSVSNSLVHLYSKCGSIHDANRAFKDIS-EPDAFSWNGLIS 595
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 211/456 (46%), Gaps = 47/456 (10%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+SSL + + EA Y + + T+ L+ A SS L G+ +H H+++
Sbjct: 190 LSSLVENGKWGEAFEIY-VKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFG 248
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ ++VL+ +++MY KC + DA + P+ +V WT +I+G +QN Q +AI ++
Sbjct: 249 AELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFR 308
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M SG++P FT+ S++ A S + S+ LG Q H+ VI L NAL+ MY K
Sbjct: 309 DMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCS 368
Query: 186 RI-LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
I +A VF I +V W S+IA F++ E ++ F EM G +PN F ++
Sbjct: 369 HITTNAVKVFREITSPNVMCWTSLIAGFAEKRLE-DSFQLFAEMQAAGV-RPNSFTMSAI 426
Query: 245 FSACSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
ACS I+ ++D D+A NAL+ A +EA S+ M R+
Sbjct: 427 LGACSKTRSLVPTMMLHGHIIKTKVD-IDIAVANALVDTYAGVGMIDEAWSVIGTMNLRD 485
Query: 295 LLP-------------------------------DGLTVHSLLCACIGRLTLYQGMQVHS 323
+ D ++ S L A G T+ G Q+H
Sbjct: 486 SITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHC 545
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
Y +K GF V N+++ +Y+KC + +A FK++ + D+ SWN +I+ +
Sbjct: 546 YSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISE-PDAFSWNGLISGFSWNGLIS 604
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
F M + +KPD IT ++ AC+ LE+
Sbjct: 605 HALSTFDDMRLAGVKPDSITLLSLISACSHGGLLEL 640
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 141/289 (48%), Gaps = 16/289 (5%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP+++ + ++ ACS RSL +H HI+ +K D+ + N +++ Y G +++A
Sbjct: 416 VRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAW 475
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
M R+ +++T + A +Q A+K+ I M G+ +F+ S + A +GLG
Sbjct: 476 SVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLG 535
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G+QLH + +KS N+L+ +Y+K I DA F I+ D SW +I+
Sbjct: 536 TMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLIS 595
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEID----- 260
FS G AL F++M G +P+ S+ SACS+ + F+ +
Sbjct: 596 GFSWNGLISHALSTFDDMRLAGV-KPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHI 654
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+P L + L+ + EAM + +M + PD L +LL AC
Sbjct: 655 TPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFK---PDSLICKTLLNAC 700
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGC 482
+H I K GL D+++ N L+ +Y K + AR LF+ M N DVVSW++++ + +
Sbjct: 36 IHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSSHTKTKH 95
Query: 483 GDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCS 542
+AL+LF M G PN TL L +C +G E G+ ++ + G+ R +
Sbjct: 96 HSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIH-CSAVKLGLEMNRFVGT 154
Query: 543 CVVDLLARAGCVH-EAEDFINQMACDADIVVWKSLLAS 579
+V+ + GC EA ++ + D+V W ++L+S
Sbjct: 155 SLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSS 192
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 166/541 (30%), Positives = 261/541 (48%), Gaps = 44/541 (8%)
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
K S DAR F +M +R++ W ++ S+ Q + + + M + P FT
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 142 IIKACSGLGSVCLGRQLHAHVIKS-EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
+KAC L V G +H V K GS L ++LI MY K R+++A +F + +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA--RI---- 254
D+ +W SM++ F K G +A+ F M+ P+ ++ SAC+ + R+
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 255 ----------------------------------LFNEIDSPDLASWNALIAGVASHSNA 280
LF I D+ SW+ +IA + A
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
EA+ +F++M D P+ TV +L AC L QG + H I+ G ++ V V A+
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTAL 305
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML-ASQIKP 399
+ MY KC A VF + + D VSW ++I+ + A FS ML + +P
Sbjct: 306 VDMYMKCFSPEEAYAVFSRIPRK-DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRP 364
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D I V+G+C+++ LE H Y+ K G + F+ L+++Y +CGSLG+A K+F
Sbjct: 365 DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF 424
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM-RSLGVSPNLVTLVGVLTACSHVGLV 518
N + D V W+SLI GY G G +AL+ F M +S V PN VT + +L+ACSH GL+
Sbjct: 425 NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLI 484
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
EGL ++++M N+Y + P EH + +VDLL R G + A + +M + +LL
Sbjct: 485 HEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLG 544
Query: 579 S 579
+
Sbjct: 545 A 545
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 218/456 (47%), Gaps = 51/456 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLIS--ACSSLRSLQLGRKVHDH 60
N + SL ++ + E L Y FS + +P + ++ AC LR + G +H
Sbjct: 29 NTLLKSLSREKQWEEVL--YHFSHMFRDEE-KPDNFTLPVALKACGELREVNYGEMIHGF 85
Query: 61 ILLS-KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
+ D+ + + ++ MY KCG + +A FD++ + ++V+W++M++G +N
Sbjct: 86 VKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQ 145
Query: 120 AIKLYIQM-LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
A++ + +M + S V P + T +++ AC+ L + LGR +H VI+ + L N+L+
Sbjct: 146 AVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLL 205
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
Y K +A N+F IA KDV SW ++IA + + G EAL FN+M+ G +PN
Sbjct: 206 NCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT-EPNV 264
Query: 239 FIFGSVFSACS----------------------------------------NFARILFNE 258
V AC+ A +F+
Sbjct: 265 ATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSR 324
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGRLTLYQ 317
I D+ SW ALI+G + A+ ++ FS M + PD + + +L +C L Q
Sbjct: 325 IPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQ 384
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
HSY+IK GFDSN + +++ +Y++C L NA VF + D+V W S+I
Sbjct: 385 AKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK-DTVVWTSLITGYG 443
Query: 378 QHNQAEELFRLFSRML-ASQIKPDHITFNDVMGACA 412
H + + F+ M+ +S++KP+ +TF ++ AC+
Sbjct: 444 IHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS 479
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 155/305 (50%), Gaps = 17/305 (5%)
Query: 17 EALVAY-DFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
EAL+ + D + T + +T ++ AC++ L+ GRK H+ + + +V +
Sbjct: 247 EALLVFNDMMDDGTEPNV--ATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTA 304
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY-IQMLQSGVMP 134
+++MY KC S E+A F ++P+++VVSW A+I+G + N + +I+ + I +L++ P
Sbjct: 305 LVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRP 364
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
++ +CS LG + + H++VIK S+ +L+ +Y++ + +A VF
Sbjct: 365 DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF 424
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA-- 252
+GIA KD W S+I + G +AL FN M+ +PNE F S+ SACS+
Sbjct: 425 NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLI 484
Query: 253 -------RILFNEID-SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
+++ N+ +P+L + L+ + + + A+ + M P + +
Sbjct: 485 HEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM---PFSPTPQILGT 541
Query: 305 LLCAC 309
LL AC
Sbjct: 542 LLGAC 546
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 172/559 (30%), Positives = 286/559 (51%), Gaps = 56/559 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ + AC + + +LG +H ++ + +V + N +++MYGKC ++ AR FD++
Sbjct: 128 TFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDEL 187
Query: 97 PQRNV---VSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGLGSV 152
R + V+W ++++ S + N A+ L+ +M + G++P +I+ C LG
Sbjct: 188 CYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLG 247
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
GRQ+H ++S + NAL+ MY K ++ DA VF + KDV +W +M+ +
Sbjct: 248 LCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGY 307
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
S+ G +AL F +M +I+S D+ +W+++I+
Sbjct: 308 SQNGRFEDALSLFGKMRE--------------------------EKIES-DVVTWSSVIS 340
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD- 331
G A EAM +F +M P+ +T+ SLL AC L G + H Y +K
Sbjct: 341 GYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKG 400
Query: 332 ------SNVPVCNAILTMYAKCSVLCNALLVFKEL-GKNADSVSWNSIIAACLQHNQAEE 384
++ V NA++ MYAKC L A +F E+ K+ D V+W +I QH A
Sbjct: 401 EHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANH 460
Query: 385 LFRLFSRMLASQ--IKPDHITFNDVMGACAKMASLEMVTQLHCYI-TKTGLAFDV-FVMN 440
+LFS M I P+ T + V+ ACA++A+L+ Q+H Y+ ++ + DV FV N
Sbjct: 461 ALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVAN 520
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+D+Y K G + +A+ +F+ M + VSW+SL+ GY G ++A ++F MR +
Sbjct: 521 CLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVL 580
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ +T + VL ACSH G+ ++G+ P EH +C+VDLL RAG + EA
Sbjct: 581 DGITFLVVLYACSHSGM-------------DFGVDPGVEHYACMVDLLGRAGRLGEAMRL 627
Query: 561 INQMACDADIVVWKSLLAS 579
IN M + VVW +LL++
Sbjct: 628 INDMPIEPTPVVWIALLSA 646
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 148/268 (55%), Gaps = 9/268 (3%)
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYI 325
WN LI ++ N A+ LF M+ PD T + AC G ++ ++ G +H +
Sbjct: 94 WNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKAC-GEISNFELGASIHGCV 152
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA--DSVSWNSIIAA---CLQHN 380
I++GF+SNV VCNA+++MY KC + +A VF EL DSV+WNSI++ C N
Sbjct: 153 IRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPN 212
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
A LFR + + I PD + +++ C + Q+H + ++GL DVFV N
Sbjct: 213 VAVSLFREMT--VGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGN 270
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+D+Y KCG + A K+F M DVV+W++++ GY+Q G ++AL LF +MR +
Sbjct: 271 ALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIES 330
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIM 528
++VT V++ + G E + ++R M
Sbjct: 331 DVVTWSSVISGYAQRGFGCEAMDVFRQM 358
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 199/498 (39%), Gaps = 102/498 (20%)
Query: 24 FSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYG 81
F + I P T ++ C L GR+VH + S DV + N +++MY
Sbjct: 218 FREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYA 277
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV--------- 132
KCG +EDA F++M ++VV+W AM+ G SQN + DA+ L+ +M + +
Sbjct: 278 KCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSS 337
Query: 133 --------------------------MPGQFTFGSIIKACSGLGSVCLGRQLHAH----V 162
P T S++ AC+ +G++ G++ H + +
Sbjct: 338 VISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFI 397
Query: 163 IKSEHG---SHLIAQNALIAMYTKFDRILDARNVFSGIARK--DVTSWGSMIAAFSKLGY 217
+K EH L NALI MY K + AR +F I K DV +W MI +++ G
Sbjct: 398 LKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGD 457
Query: 218 ELEALCHFNEMLH-HGAYQPNEFIFGSVFSACSNF------------------------- 251
AL F+EM PN+F V AC+
Sbjct: 458 ANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLF 517
Query: 252 -----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
A+++F+ + + SW +L+ G H + +A +F EMR
Sbjct: 518 VANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEA 577
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
L+ DG+T +L AC + GM G D V ++ + + L A+
Sbjct: 578 LVLDGITFLVVLYACS-----HSGMD-------FGVDPGVEHYACMVDLLGRAGRLGEAM 625
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+ ++ V W ++++AC H+ EEL ++ L + T+ + A
Sbjct: 626 RLINDMPIEPTPVVWIALLSACRIHSN-EELAEFAAKKLLELKADNDGTYTLLSNIYANA 684
Query: 415 ASLEMVTQLHCYITKTGL 432
+ V ++ + +TG+
Sbjct: 685 RRWKDVARIGYLMKRTGI 702
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 188/576 (32%), Positives = 290/576 (50%), Gaps = 56/576 (9%)
Query: 53 LGRKVHDHILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ-RNVVSWTAMIAG 110
LGR +H +L ++ D ++ N +L MY KCG + AR FD M R++VSWTAM
Sbjct: 61 LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC-SGLGSVCLGRQLHAHVIKSEH-G 168
++N E +A+ L +ML+SG+ P FT + AC G G + IK+ G
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWG 180
Query: 169 SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
+ + ALI M+ + ++ AR VF+G+ + V W MI + + G +A+ F M
Sbjct: 181 TDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGM 240
Query: 229 LHHGAYQPNEFIFGSVFSACSNF------------------------------------- 251
L G ++P+ + S+ SAC+
Sbjct: 241 LEDG-FEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQM 299
Query: 252 ------ARILFNEIDSPDLASWNALIAG-VASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
AR +F + + ++ SW ALI+G V N A+ L EM + + P+ LT S
Sbjct: 300 EQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSS 359
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
LL AC G Q+H+ ++K + V NA+++MYA+ + A F +L +
Sbjct: 360 LLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYER- 418
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
+ +S +S I + N + S++ + + TF ++ A A + QLH
Sbjct: 419 NLLSTSSDIGETGRSNASWS-----SQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLH 473
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP-DVVSWSSLILGYAQFGCG 483
KTG D + N L+ +Y +CG L A + F+ ME+ +V+SW+S+I A+ G
Sbjct: 474 ALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHA 533
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
+ AL LF M GV PN VT + VL+ACSHVGLV+EG +R M+ ++ +IP EH +C
Sbjct: 534 ERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYAC 593
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+VDLLAR+G V EA +FIN+M C AD +VWK+LL +
Sbjct: 594 MVDLLARSGLVQEALEFINEMPCKADALVWKTLLGA 629
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 188/390 (48%), Gaps = 46/390 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC---GSLEDARMGF 93
T + ++SAC+ S LG+++H +L D + +++MY K S+E AR F
Sbjct: 251 TMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVF 310
Query: 94 DKMPQRNVVSWTAMIAGCSQ-NYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
+MP NV+SWTA+I+G Q QEN+A++L +ML + P T+ S++KAC+ L
Sbjct: 311 KRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQ 370
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV---------- 202
GRQ+HA V+K+ G+ + NAL++MY + + +AR F + +++
Sbjct: 371 DSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGET 430
Query: 203 ----TSWGSMIAA---------FSKL--GYELEALCHFNEMLH----HGAYQPNEFIFGS 243
SW S I + F+ L L + LH ++ ++ I S
Sbjct: 431 GRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNS 490
Query: 244 VFSACSNFARI-----LFNEI-DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
+ S S + F+E+ D ++ SW ++I+ +A H +A A+SLF +M + P
Sbjct: 491 LVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKP 550
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN-VPVCN---AILTMYAKCSVLCNA 353
+ +T ++L AC + +G + Y M D +P ++ + A+ ++ A
Sbjct: 551 NDVTYIAVLSACSHVGLVKEGKE---YFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEA 607
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L E+ AD++ W +++ AC + E
Sbjct: 608 LEFINEMPCKADALVWKTLLGACRTYENIE 637
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 150/293 (51%), Gaps = 22/293 (7%)
Query: 30 NIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
N I P+ TY+ L+ AC++L GR++H ++ + V+ N +++MY + G +E
Sbjct: 347 NESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCME 406
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
+AR FD++ +RN++S ++ I + + N + I+ + GV FTF S++ A +
Sbjct: 407 EARKAFDQLYERNLLSTSSDIG---ETGRSNASWSSQIESMDVGV--STFTFASLLSAAA 461
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK-DVTSWG 206
+G G+QLHA IK+ S N+L++MY++ + DA F + +V SW
Sbjct: 462 TVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWT 521
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS 261
S+I+A +K G+ AL F++M+ G +PN+ + +V SACS+ + F +
Sbjct: 522 SIISALAKHGHAERALSLFHDMILSGV-KPNDVTYIAVLSACSHVGLVKEGKEYFRSMQK 580
Query: 262 -----PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
P + + ++ +A EA+ +EM + D L +LL AC
Sbjct: 581 DHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCK---ADALVWKTLLGAC 630
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 167/552 (30%), Positives = 277/552 (50%), Gaps = 52/552 (9%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
N+ R ++ +IS C S L R++ + + D+V N +++ + +L
Sbjct: 73 NSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTR----DLVSWNVMISGCVRYRNLR 128
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
AR+ FD+MP+R+VVSW AM++G +QN +A +++ +M ++ ++ A
Sbjct: 129 AARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM----PCKNSISWNGMLAAYV 184
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
G + R+L +S+ LI+ N ++ Y K +R++DAR +F + +D SW +
Sbjct: 185 QNGRIEDARRL----FESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNT 240
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASW 267
MI+ +++ G LEA F E + + G V + + AR +F+ + + SW
Sbjct: 241 MISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSW 300
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
NA+IAG ++A LF E +P C
Sbjct: 301 NAIIAGYVQCKRMDQARELF------EAMP-----------C------------------ 325
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
NV N ++T YA+ + A F + + DS+SW +IIA Q EE
Sbjct: 326 ----QNVSSWNTMITGYAQNGDIAQARNFFDRMPQR-DSISWAAIIAGYAQSGYGEEALH 380
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
LF M + + TF + CA++A+LE+ Q+H + K GL +V N L+ +Y
Sbjct: 381 LFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYC 440
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
KCG++ A +F +E +VVSW+++I GYA+ G G EAL LF M+ G+ P+ VT+VG
Sbjct: 441 KCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVG 500
Query: 508 VLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
VL+ACSH GLV++G + M +YGI +H +C++DLL RAG + +A++ + M +
Sbjct: 501 VLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFE 560
Query: 568 ADIVVWKSLLAS 579
D W +LL +
Sbjct: 561 PDAATWGALLGA 572
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 129/245 (52%), Gaps = 10/245 (4%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VS + + +EA +D ++ ++ +I+ + + R++ + +
Sbjct: 273 VSGYVQNGMLDEARRVFDGMPEKNSV-----SWNAIIAGYVQCKRMDQARELFEAM---P 324
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
CQ +V N ++ Y + G + AR FD+MPQR+ +SW A+IAG +Q+ +A+ L++
Sbjct: 325 CQ-NVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFV 383
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + G + TF S + C+ + ++ LG+Q+H V+K+ S NAL+ MY K
Sbjct: 384 EMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCG 443
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I DA VF GI K+V SW +MIA +++ G+ EAL F M G P++ V
Sbjct: 444 NIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGIL-PDDVTMVGVL 502
Query: 246 SACSN 250
SACS+
Sbjct: 503 SACSH 507
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 157/385 (40%), Gaps = 75/385 (19%)
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEID 260
D+ W I + G AL FN M + N I G + + AR LF ++
Sbjct: 48 DIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMP 107
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL------------------------ 296
+ DL SWN +I+G + N A LF +M +R+++
Sbjct: 108 TRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDE 167
Query: 297 ---PDGLTVHSLLCACI--GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ ++ + +L A + GR+ + + + D + N ++ Y K + L
Sbjct: 168 MPCKNSISWNGMLAAYVQNGRI------EDARRLFESKADWELISWNCMMGGYVKRNRLV 221
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS--------------------- 390
+A +F + + D VSWN++I+ Q+ + E RLF
Sbjct: 222 DARGIFDRMPER-DEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNG 280
Query: 391 ------RMLASQIKPDHITFNDVMGA---CAKM-ASLEMVTQLHCYITKTGLAFDVFVMN 440
R+ + + +++N ++ C +M + E+ + C +V N
Sbjct: 281 MLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ--------NVSSWN 332
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
++ Y + G + AR F+ M D +SW+++I GYAQ G G+EAL LF M+ G
Sbjct: 333 TMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERL 392
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLY 525
N T L+ C+ + +E G ++
Sbjct: 393 NRSTFTSTLSTCAEIAALELGKQVH 417
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 103/219 (47%), Gaps = 18/219 (8%)
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
L +AD V WN I +++ Q + RLF+ M + I++N ++ C +
Sbjct: 43 LATDADIVKWNIAITNHMRNGQCDSALRLFNSM----PRRSSISWNAMISGCLSNDKFYL 98
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
QL + D+ N ++ ++ +L +AR LF+ M DVVSW++++ GYAQ
Sbjct: 99 ARQLFEKMPTR----DLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQ 154
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTRE 539
G EA ++F M N ++ G+L A G +E+ L+ + ++ +I
Sbjct: 155 NGYVKEAKEIFDEM----PCKNSISWNGMLAAYVQNGRIEDARRLFE-SKADWELIS--- 206
Query: 540 HCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+C++ + + +A ++M + D V W ++++
Sbjct: 207 -WNCMMGGYVKRNRLVDARGIFDRMP-ERDEVSWNTMIS 243
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 166/534 (31%), Positives = 275/534 (51%), Gaps = 39/534 (7%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N IL+ Y G L A+ F P RN +WT M+ + + +DA+ L+ ML GV+
Sbjct: 292 NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 351
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P + T +++ C LH IK +H+ N L+ Y K + AR V
Sbjct: 352 PDRVTVTTVLNLPG-----CTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 406
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG-AYQP---------------- 236
F + KD ++ +M+ SK G +AL F M G + P
Sbjct: 407 FLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSV 466
Query: 237 -NEFIFGSV---FSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
N F+ S+ +S C + R LF+E+ D S+N +IA A + A + LF EM
Sbjct: 467 LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREM 526
Query: 291 R----DRELLPDGLTVHSLLCACIGRLT-LYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
+ DR++LP ++ + + G L ++ G Q+H+ ++ +G S + NA++ MY+
Sbjct: 527 QKLGFDRQVLP-----YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYS 581
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
KC +L A F + + ++SW ++I +Q+ Q EE +LFS M + ++PD TF+
Sbjct: 582 KCGMLDAAKSNFSNRSEKS-AISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFS 640
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
++ A + +A + + QLH Y+ ++G VF + L+D+Y KCG L A + F+ M
Sbjct: 641 SIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPER 700
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
+ +SW+++I YA +G A+K+F M G +P+ VT + VL ACSH GL +E + +
Sbjct: 701 NSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYF 760
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+M+++Y I P +EH +CV+D L R GC + + + +M AD ++W S+L S
Sbjct: 761 HLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHS 814
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 160/304 (52%), Gaps = 29/304 (9%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
YA ++S SL + +G+++H ++L + +L N +++MY KCG L+ A+ F
Sbjct: 538 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 597
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+++ +SWTA+I G QN Q +A++L+ M ++G+ P + TF SIIKA S L + LGRQ
Sbjct: 598 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 657
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
LH+++I+S + S + + + L+ MY K + +A F + ++ SW ++I+A++ G
Sbjct: 658 LHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGE 717
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASH 277
A+ F MLH G + P+ F SV +ACS+ N L
Sbjct: 718 AKNAIKMFEGMLHCG-FNPDSVTFLSVLAACSH-----------------NGL------- 752
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
A+E M F M+ + + ++ + +GR+ + QV +++M F ++ +
Sbjct: 753 --ADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFS--QVQKMLVEMPFKADPIIW 808
Query: 338 NAIL 341
+IL
Sbjct: 809 TSIL 812
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 154/360 (42%), Gaps = 50/360 (13%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
+V + N +L+ Y KC L+D R FD+MP+R+ VS+ +IA + N ++L+ +M
Sbjct: 468 NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQ 527
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
+ G + +++ L V +G+Q+HA ++ S + NALI MY+K +
Sbjct: 528 KLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLD 587
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
A++ FS + K SW ++I + + G EAL F++M G +P+ F S+ A
Sbjct: 588 AAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG-LRPDRATFSSIIKAS 646
Query: 249 SNFARI----------------------------------------LFNEIDSPDLASWN 268
S+ A I F+E+ + SWN
Sbjct: 647 SSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWN 706
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC-----IGRLTLYQGMQVHS 323
A+I+ A + A A+ +F M PD +T S+L AC Y + H
Sbjct: 707 AVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQ 766
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
Y I + V + + + C +LV E+ AD + W SI+ +C H E
Sbjct: 767 YSISPWKEHYACVIDTLGRV--GCFSQVQKMLV--EMPFKADPIIWTSILHSCRIHGNQE 822
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 144/315 (45%), Gaps = 32/315 (10%)
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--ARILFNEIDSPDLASWNALIAG 273
G+ A F++M H + N + S +S+ + A+ LF + +W ++
Sbjct: 271 GHLHRARAMFDQMPHKNIFSLNLIL--SAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRA 328
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
A+ ++A+SLF M ++PD +TV ++L L +H + IK G D++
Sbjct: 329 HAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVL-----NLPGCTVPSLHPFAIKFGLDTH 383
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ---HNQAEELFRLFS 390
V VCN +L Y K +L A VF E+ + D+V++N+++ C + H QA +LF
Sbjct: 384 VFVCNTLLDAYCKHGLLAAARRVFLEM-HDKDAVTYNAMMMGCSKEGLHTQALQLFAAMR 442
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
R S+ P H+ Q +++ +VFV N L+D Y KC
Sbjct: 443 RAGYSR-HPLHL------------------LQYSHSRSRSTSVLNVFVNNSLLDFYSKCD 483
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
L R+LF+ M D VS++ +I YA C L+LF M+ LG ++ +L+
Sbjct: 484 CLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLS 543
Query: 511 ACSHVGLVEEGLHLY 525
+ V G ++
Sbjct: 544 VAGSLPDVHIGKQIH 558
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
++ + + EAL + +R +T++ +I A SSL + LGR++H +++ S
Sbjct: 608 ITGYVQNGQHEEALQLFS-DMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSG 666
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ V + +++MY KCG L++A FD+MP+RN +SW A+I+ + + +AIK++
Sbjct: 667 YKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFE 726
Query: 126 QMLQSGVMPGQFTFGSIIKACS--GLGSVCL 154
ML G P TF S++ ACS GL C+
Sbjct: 727 GMLHCGFNPDSVTFLSVLAACSHNGLADECM 757
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 177/604 (29%), Positives = 314/604 (51%), Gaps = 54/604 (8%)
Query: 26 QNNTNIRIRPS--TYAGLISACSSLRSLQLG--RKVHDHILLSKCQPDVVLQNHILNMYG 81
+++ I +RP+ T+ LI+A +SL S G +V +L S D+ + + +++ +
Sbjct: 258 HDDSAIELRPNEHTFGSLITA-TSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFA 316
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
+ G L++A+ F + +RN V+ +I G + + +A+ +++ S V+ TF
Sbjct: 317 RHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNTD-TFVV 375
Query: 142 IIKACSGLG----SVCLGRQLHAHVIKSEHGSHLIA-QNALIAMYTKFDRILDARNVFSG 196
++ A + + GR++H H++++ IA N L+ MY K I A VF
Sbjct: 376 LLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRL 435
Query: 197 IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-- 254
+ +D SW ++I+ + G+ A+ ++ M+ G P+ F S S+C++ +
Sbjct: 436 LCARDRVSWNTIISVLDQNGFCEGAMMNYC-MMRQGCISPSNFAAISGLSSCASLRLLTA 494
Query: 255 --------------------------------------LFNEIDSPDLASWNALIA-GVA 275
+FN + D+ SWN+++ V+
Sbjct: 495 GQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVS 554
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
SH+ E++ +FS M L P+ +T +LL A L G QVH+ ++K G +
Sbjct: 555 SHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNA 614
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
V NA+++ YAK + + +F + D+VSWNS+I+ + + +E M+ S
Sbjct: 615 VDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHS 674
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA 455
D TF+ V+ ACA +A+LE ++H + ++ L DV V + L+D+Y KCG + A
Sbjct: 675 NQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYA 734
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
K+FN M + SW+S+I GYA+ G G++AL++F M+ G P+ VT V VL+ACSH
Sbjct: 735 SKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHA 794
Query: 516 GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
GLV+ GL + +ME ++GI+P EH SCV+DLL RAG + + +++IN+M + ++W++
Sbjct: 795 GLVDRGLDYFEMME-DHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRT 853
Query: 576 LLAS 579
+L +
Sbjct: 854 VLVA 857
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 282/581 (48%), Gaps = 60/581 (10%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
++H ++ D+ L NH++N+Y K L AR FD M +RN VSWT +++G +
Sbjct: 76 ERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLS 135
Query: 115 YQENDAIKLYIQMLQSGV---MPGQFTFGSIIKACSGLGS--VCLGRQLHAHVIKSEHGS 169
++A +++ ML G P FTFGS+++AC G + Q+H V K+ + S
Sbjct: 136 GITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYAS 195
Query: 170 HLIAQNALIAMYTK--FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
+ NALI+MY L A+ VF +D+ +W ++++ ++K GY + F
Sbjct: 196 NTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMA 255
Query: 228 MLHHGA---YQPNEFIFGSVFSA-----CSN------FARILFNEIDSPDLASWNALIAG 273
MLH + +PNE FGS+ +A CS+ FAR+L S DL +AL++
Sbjct: 256 MLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVL-KSGSSSDLYVGSALVSA 314
Query: 274 VASHSNANEAMSLFSEMRDRELLP-------------------------DGLTVHS---- 304
A H +EA +F +++R + D V++
Sbjct: 315 FARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNTDTFV 374
Query: 305 LLCACIGRLT-----LYQGMQVHSYIIKMGF-DSNVPVCNAILTMYAKCSVLCNALLVFK 358
+L + + + L +G +VH +I++ G D + + N ++ MYAKC + A VF+
Sbjct: 375 VLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFR 434
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
L D VSWN+II+ Q+ E + M I P + + +CA + L
Sbjct: 435 LLCAR-DRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLT 493
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI-LGY 477
Q+HC K GL D V N L+ +Y CG+ + ++FN M D+VSW+S++ +
Sbjct: 494 AGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMV 553
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
+ E++++F+ M G++PN VT V +L+A S + ++E G ++ ++ ++G I
Sbjct: 554 SSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVL-KHGAIED 612
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++ A++G + E + M+ D V W S+++
Sbjct: 613 NAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMIS 653
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 230/531 (43%), Gaps = 52/531 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLR----SLQLGRKVH 58
N + L KQ+ EA+ F + + T+ L+SA + L GR+VH
Sbjct: 340 NGLIVGLVKQHCSEEAVGI--FMGTRDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVH 397
Query: 59 DHILLSK-CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQE 117
HIL + + L N ++NMY KCG+++ A F + R+ VSW +I+ QN
Sbjct: 398 GHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFC 457
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
A+ Y M Q + P F S + +C+ L + G+Q+H +K NAL
Sbjct: 458 EGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNAL 517
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF-SKLGYELEALCHFNEMLHHGAYQP 236
+ MY ++ +F+ +A D+ SW S++ S E++ F+ M+ G P
Sbjct: 518 VKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSG-LTP 576
Query: 237 NEFIFGSVFSACSNFA----------------RILFNEIDSP------------------ 262
N+ F ++ SA S + I N +D+
Sbjct: 577 NKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLF 636
Query: 263 -------DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
D SWN++I+G + + E M M + D T +L AC L
Sbjct: 637 SSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAAL 696
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
+GM++H++ I+ +S+V V +A+L MY+KC + A VF + + + SWNS+I+
Sbjct: 697 ERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQK-NEFSWNSMISG 755
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
+H E+ +F M + PDH+TF V+ AC+ ++ + G+
Sbjct: 756 YARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMMEDHGILPH 815
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDE 485
+ + ++D+ + G L ++ N M P+ + W ++++ Q GD
Sbjct: 816 IEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDR 866
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 188/406 (46%), Gaps = 45/406 (11%)
Query: 33 IRPSTYAGL--ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I PS +A + +S+C+SLR L G++VH + D + N ++ MYG CG+ ++
Sbjct: 472 ISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESW 531
Query: 91 MGFDKMPQRNVVSWTAMIA-GCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F+ M + ++VSW +++ S + ++++++ M++SG+ P + TF +++ A S L
Sbjct: 532 EIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPL 591
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSM 208
+ LG+Q+HA V+K NAL++ Y K + +FS ++ R+D SW SM
Sbjct: 592 SVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSM 651
Query: 209 IAAFSKLGYELEAL------CHFNEML------------------------HHGAYQPN- 237
I+ + G+ E + H N+ML H +
Sbjct: 652 ISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQL 711
Query: 238 ------EFIFGSVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
E ++S C ++A +FN + + SWN++I+G A H +A+ +F E
Sbjct: 712 ESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEE 771
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M+ PD +T S+L AC + +G+ + G ++ + ++ + +
Sbjct: 772 MQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMMEDHGILPHIEHYSCVIDLLGRAGK 831
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE--ELFRLFSRML 393
L + +++ W +++ AC Q + +L + SRML
Sbjct: 832 LLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRML 877
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 215/486 (44%), Gaps = 62/486 (12%)
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G +LH ++K L N L+ +Y K R+ AR VF G+ ++ SW ++
Sbjct: 70 GEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLV 129
Query: 210 AAFSKLGYELEALCHFNEMLHHGAY--QPNEFIFGSVFSACSNF---------------- 251
+ + G EA F ML G+ +P F FGSV AC +
Sbjct: 130 SGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVS 189
Query: 252 ----------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEA 283
A+ +F+ DL +WNAL++ A
Sbjct: 190 KTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVST 249
Query: 284 MSLFSEMRDR----ELLPDGLTVHSLLCACIGRLTLYQGM--QVHSYIIKMGFDSNVPVC 337
+LF M EL P+ T SL+ A + G+ QV + ++K G S++ V
Sbjct: 250 FTLFMAMLHDDSAIELRPNEHTFGSLITA-TSLSSCSSGVLDQVFARVLKSGSSSDLYVG 308
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
+A+++ +A+ +L A +F L K ++V+ N +I ++ + +EE +F S +
Sbjct: 309 SALVSAFARHGMLDEAKDIFINL-KERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFV 367
Query: 398 KPDHITFNDVMGACAKMA----SLEMVTQLHCYITKTGLA-FDVFVMNGLMDIYIKCGSL 452
+ TF ++ A A+ + L ++H +I +TGL + + NGL+++Y KCG++
Sbjct: 368 V-NTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAI 426
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
A ++F + D VSW+++I Q G + A+ + MR +SP+ + L++C
Sbjct: 427 DKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSC 486
Query: 513 SHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
+ + L+ G ++ ++G+ + +V + G E+ + N MA + DIV
Sbjct: 487 ASLRLLTAGQQVH-CDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMA-EHDIVS 544
Query: 573 WKSLLA 578
W S++
Sbjct: 545 WNSIMG 550
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 167/573 (29%), Positives = 294/573 (51%), Gaps = 53/573 (9%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
R+ T ++ AC L S + G H I + + +V + N ++ MY +CGSLE+A M
Sbjct: 7 RLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 66
Query: 92 GFDKMPQR---NVVSWTAMIAGCSQNYQENDAIKLYIQML------QSGVMPGQFTFGSI 142
FD++ QR +V+SW ++++ ++ A+ L+ +M + + +I
Sbjct: 67 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 126
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
+ AC L +V +++H + I++ + NALI Y K + +A VF+ + KDV
Sbjct: 127 LPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 186
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSP 262
SW +M+A +S+ G F + F N + E
Sbjct: 187 VSWNAMVAGYSQSGN-----------------------FKAAFELFKNMRK----ENIPL 219
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ +W A+IAG + ++EA+++F +M LP+ +T+ S+L AC QGM++H
Sbjct: 220 DMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIH 279
Query: 323 SYIIKM----------GFDSNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNS 371
+Y +K G D ++ V NA++ MY+KC A +F ++ + + V+W
Sbjct: 280 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 339
Query: 372 IIAACLQHNQAEELFRLFSRMLASQ--IKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
+I Q+ + + +LF M++ + P+ T + ++ ACA +A++ + Q+H Y+ +
Sbjct: 340 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 399
Query: 430 TGLAFD---VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
+D FV N L+++Y KCG + +AR +F+ M +SW+S++ GY G G EA
Sbjct: 400 HH-QYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEA 458
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
L +F +MR G P+ +T + VL ACSH G+V++GL + M +YG+ P EH + +D
Sbjct: 459 LDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAID 518
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
LLAR G + +A + M + VVW +LL++
Sbjct: 519 LLARFGRLDKAWKTVKDMPMEPTAVVWVALLSA 551
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 188/452 (41%), Gaps = 97/452 (21%)
Query: 26 QNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS 85
+ TN R + ++ AC SL+++ ++VH + + + DV + N +++ Y KCG
Sbjct: 111 EKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGL 170
Query: 86 LEDARMGFDKMPQRNVVSW-----------------------------------TAMIAG 110
+E+A F+ M ++VVSW TA+IAG
Sbjct: 171 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAG 230
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS----- 165
SQ ++A+ ++ QM+ SG +P T S++ AC+ LG+ G ++HA+ +K+
Sbjct: 231 YSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTL 290
Query: 166 -----EHGSHLIAQNALIAMYTKFDRILDARNVFSGIA--RKDVTSWGSMIAAFSKLGYE 218
L+ NALI MY+K AR++F I ++V +W MI ++ G
Sbjct: 291 DNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDS 350
Query: 219 LEALCHFNEMLHHG-AYQPNEFIFGSVFSACSNF-------------------------- 251
+AL F EM+ PN + + AC++
Sbjct: 351 NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFV 410
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR +F+ + SW +++ G H +EA+ +F +MR
Sbjct: 411 ANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 470
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV-PVCNAI---LTMYAKCSVLC 351
+PD +T +L AC + QG+ SY M D + P + + A+ L
Sbjct: 471 VPDDITFLVVLYACSHCGMVDQGL---SYFDSMSADYGLTPRAEHYAYAIDLLARFGRLD 527
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
A K++ +V W ++++AC H+ E
Sbjct: 528 KAWKTVKDMPMEPTAVVWVALLSACRVHSNVE 559
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
ML + + DH T V+ AC ++ S + H I G +VF+ N L+ +Y +CGS
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 452 LGSARKLFNFMEN---PDVVSWSSLILGYAQFGCGDEALKLFTRM------RSLGVSPNL 502
L A +F+ + DV+SW+S++ + + AL LF++M + ++
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 503 VTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
+++V +L AC + V + ++ + N G + ++D A+ G + A
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRN--GTFLDVFVGNALIDAYAKCGLMENAVKVF 178
Query: 562 NQMACDADIVVWKSLLA 578
N M D+V W +++A
Sbjct: 179 NMMEFK-DVVSWNAMVA 194
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 165/482 (34%), Positives = 247/482 (51%), Gaps = 47/482 (9%)
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKS-EHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
G ++K S+ LGR +HA ++K+ + N LI MY+K D AR V
Sbjct: 9 LGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLT 68
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG--------------- 242
++V SW S+I+ ++ G+ AL F EM G PN+F F
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV-PNDFTFPCAFKAVASLRLPVTG 127
Query: 243 --------------SVFSACSNF-----------ARILFNEIDSPDLASWNALIAGVASH 277
VF CS F AR LF+EI +L +WNA I+ +
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
EA+ F E R + P+ +T + L AC L L GMQ+H +++ GFD++V VC
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVC 247
Query: 338 NAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
N ++ Y KC + ++ ++F E+G KNA VSW S++AA +Q+++ E+ L+ R
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFTEMGTKNA--VSWCSLVAAYVQNHEDEKASVLYLRSRKDI 305
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
++ + V+ ACA MA LE+ +H + K + +FV + L+D+Y KCG + +
Sbjct: 306 VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 365
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM--RSLGVSPNLVTLVGVLTACSH 514
+ F+ M ++V+ +SLI GYA G D AL LF M R G +PN +T V +L+ACS
Sbjct: 366 QAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 425
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
G VE G+ ++ M + YGI P EH SC+VD+L RAG V A +FI +M I VW
Sbjct: 426 AGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWG 485
Query: 575 SL 576
+L
Sbjct: 486 AL 487
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 209/478 (43%), Gaps = 47/478 (9%)
Query: 41 LISACSSLRSLQLGRKVHDHILLS-KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR 99
L+ S S++LGR VH I+ + P L N+++NMY K E AR+ P R
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
NVVSWT++I+G +QN + A+ + +M + GV+P FTF KA + L G+Q+H
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
A +K + + MY K DAR +F I +++ +W + I+ G
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------------- 251
EA+ F E + PN F + +ACS++
Sbjct: 192 EAIEAFIEFRRIDGH-PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 252 ------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
+ I+F E+ + + SW +L+A + +A L+ R +
Sbjct: 251 IDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 310
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+ S+L AC G L G +H++ +K + + V +A++ MY KC + ++ F E
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE 370
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS--QIKPDHITFNDVMGACAKMASL 417
+ + + V+ NS+I Q + LF M P+++TF ++ AC++ ++
Sbjct: 371 MPEK-NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAV 429
Query: 418 EMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSL 473
E ++ + T G+ + ++D+ + G + A + M P + W +L
Sbjct: 430 ENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 140/305 (45%), Gaps = 29/305 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ACS L LG ++H +L S DV + N +++ YGKC + + + F +M
Sbjct: 211 TFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM 270
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+N VSW +++A QN+++ A LY++ + V F S++ AC+G+ + LGR
Sbjct: 271 GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGR 330
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+HAH +K+ + +AL+ MY K I D+ F + K++ + S+I ++ G
Sbjct: 331 SIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQG 390
Query: 217 YELEALCHFNEMLHHG-AYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVA 275
AL F EM G PN F S+ SACS AG
Sbjct: 391 QVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR---------------------AGAV 429
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
+ M +F MR + G +S + +GR + + + + +I KM +
Sbjct: 430 EN-----GMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVE--RAYEFIKKMPIQPTIS 482
Query: 336 VCNAI 340
V A+
Sbjct: 483 VWGAL 487
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 195/469 (41%), Gaps = 61/469 (13%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S L + ++ ALV + F + T+ A +SLR G+++H L K
Sbjct: 80 ISGLAQNGHFSTALVEF-FEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH--ALAVK 136
Query: 66 CQP--DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
C DV + +MY K +DAR FD++P+RN+ +W A I+ + + +AI+
Sbjct: 137 CGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEA 196
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+I+ + P TF + + ACS + LG QLH V++S + + N LI Y K
Sbjct: 197 FIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGK 256
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
+I + +F+ + K+ SW S++AA+ + +E E + ++F+ S
Sbjct: 257 CKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQ-NHEDEKASVLYLRSRKDIVETSDFMISS 315
Query: 244 VFSACSNFARI----------------------------------------LFNEIDSPD 263
V SAC+ A + F+E+ +
Sbjct: 316 VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 375
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDR--ELLPDGLTVHSLLCACIGRLTLYQGMQV 321
L + N+LI G A + A++LF EM R P+ +T SLL AC + GM++
Sbjct: 376 LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 435
Query: 322 -HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
S G + + I+ M + ++ A K++ W ++ AC H
Sbjct: 436 FDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 495
Query: 381 Q-------AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
+ AE LF+ L + +H+ ++ A + A V +
Sbjct: 496 KPQLGLLAAENLFK-----LDPKDSGNHVLLSNTFAAAGRWAEANTVRE 539
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 156/331 (47%), Gaps = 11/331 (3%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR++ + ++ SW +LI+G+A + + + A+ F EMR ++P+ T A
Sbjct: 61 ARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVAS 120
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
G Q+H+ +K G +V V + MY K + +A +F E+ + + +WN+
Sbjct: 121 LRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPER-NLETWNA 179
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
I+ + + E F P+ ITF + AC+ L + QLH + ++G
Sbjct: 180 FISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSG 239
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
DV V NGL+D Y KC + S+ +F M + VSW SL+ Y Q ++A L+
Sbjct: 240 FDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYL 299
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC----SCVVDL 547
R R V + + VL+AC+ + +E G ++ + + E S +VD+
Sbjct: 300 RSRKDIVETSDFMISSVLSACAGMAGLELGRSIH-----AHAVKACVERTIFVGSALVDM 354
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ GC+ ++E ++M + ++V SL+
Sbjct: 355 YGKCGCIEDSEQAFDEMP-EKNLVTRNSLIG 384
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 121/282 (42%), Gaps = 16/282 (5%)
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVP--VCNAILTMYAKCSVLCNALLVFKELGK 362
LL I ++ G VH+ I+K DS P + N ++ MY+K +A LV + L
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLR-LTP 69
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
+ VSW S+I+ Q+ F M + P+ TF A A + Q
Sbjct: 70 ARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQ 129
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGC 482
+H K G DVFV D+Y K ARKLF+ + ++ +W++ I G
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 483 GDEALKLFTRMRSLGVSPNLVTLVGVLTACS-----HVGLVEEGLHLYRIMENEYGIIPT 537
EA++ F R + PN +T L ACS ++G+ GL L + + +
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV--- 246
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
C+ ++D + + +E +M + V W SL+A+
Sbjct: 247 ---CNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAA 284
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 167/573 (29%), Positives = 294/573 (51%), Gaps = 53/573 (9%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
R+ T ++ AC L S + G H I + + +V + N ++ MY +CGSLE+A M
Sbjct: 114 RLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 173
Query: 92 GFDKMPQR---NVVSWTAMIAGCSQNYQENDAIKLYIQML------QSGVMPGQFTFGSI 142
FD++ QR +V+SW ++++ ++ A+ L+ +M + + +I
Sbjct: 174 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 233
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
+ AC L +V +++H + I++ + NALI Y K + +A VF+ + KDV
Sbjct: 234 LPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 293
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSP 262
SW +M+A +S+ G F + F N + E
Sbjct: 294 VSWNAMVAGYSQSGN-----------------------FKAAFELFKNMRK----ENIPL 326
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ +W A+IAG + ++EA+++F +M LP+ +T+ S+L AC QGM++H
Sbjct: 327 DMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIH 386
Query: 323 SYIIKM----------GFDSNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNS 371
+Y +K G D ++ V NA++ MY+KC A +F ++ + + V+W
Sbjct: 387 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 446
Query: 372 IIAACLQHNQAEELFRLFSRMLASQ--IKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
+I Q+ + + +LF M++ + P+ T + ++ ACA +A++ + Q+H Y+ +
Sbjct: 447 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 506
Query: 430 TGLAFD---VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
+D FV N L+++Y KCG + +AR +F+ M +SW+S++ GY G G EA
Sbjct: 507 HH-QYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEA 565
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
L +F +MR G P+ +T + VL ACSH G+V++GL + M +YG+ P EH + +D
Sbjct: 566 LDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAID 625
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
LLAR G + +A + M + VVW +LL++
Sbjct: 626 LLARFGRLDKAWKTVKDMPMEPTAVVWVALLSA 658
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 190/452 (42%), Gaps = 97/452 (21%)
Query: 26 QNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS 85
+ TN R + ++ AC SL+++ ++VH + + + DV + N +++ Y KCG
Sbjct: 218 EKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGL 277
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQN-------------YQEN-------------- 118
+E+A F+ M ++VVSW AM+AG SQ+ +EN
Sbjct: 278 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAG 337
Query: 119 --------DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS----- 165
+A+ ++ QM+ SG +P T S++ AC+ LG+ G ++HA+ +K+
Sbjct: 338 YSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTL 397
Query: 166 -----EHGSHLIAQNALIAMYTKFDRILDARNVFSGIA--RKDVTSWGSMIAAFSKLGYE 218
L+ NALI MY+K AR++F I ++V +W MI ++ G
Sbjct: 398 DNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDS 457
Query: 219 LEALCHFNEMLHHG-AYQPNEFIFGSVFSACSNFARI----------------------- 254
+AL F EM+ PN + + AC++ A I
Sbjct: 458 NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFV 517
Query: 255 -------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+F+ + SW +++ G H +EA+ +F +MR
Sbjct: 518 ANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 577
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV-PVCNAI---LTMYAKCSVLC 351
+PD +T +L AC + QG+ SY M D + P + + A+ L
Sbjct: 578 VPDDITFLVVLYACSHCGMVDQGL---SYFDSMSADYGLTPRAEHYAYAIDLLARFGRLD 634
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
A K++ +V W ++++AC H+ E
Sbjct: 635 KAWKTVKDMPMEPTAVVWVALLSACRVHSNVE 666
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 119/259 (45%), Gaps = 14/259 (5%)
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
F S + ++ Y C ALLV + + + +V WN +I ++ + + +
Sbjct: 47 FISPRSLGTGVVASYLACGATDYALLVLERVTPSP-AVWWNLLIREHIKQGRLDSAINVS 105
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
RML + + DH T V+ AC ++ S + H I G +VF+ N L+ +Y +C
Sbjct: 106 CRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRC 165
Query: 450 GSLGSARKLFNFMEN---PDVVSWSSLILGYAQFGCGDEALKLFTRM------RSLGVSP 500
GSL A +F+ + DV+SW+S++ + + AL LF++M +
Sbjct: 166 GSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERS 225
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
+++++V +L AC + V + ++ + N G + ++D A+ G + A
Sbjct: 226 DIISIVNILPACGSLKAVPQTKEVHGNAIRN--GTFLDVFVGNALIDAYAKCGLMENAVK 283
Query: 560 FINQMACDADIVVWKSLLA 578
N M D+V W +++A
Sbjct: 284 VFNMMEFK-DVVSWNAMVA 301
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 17/149 (11%)
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
G++ Y+ CG+ A + + V W+ LI + + G D A+ + RM G
Sbjct: 55 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 114
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH------CSCVVDLLARAGC 553
+ TL VL AC L YR +G+I C+ +V + +R G
Sbjct: 115 LDHFTLPHVLKACGE-------LPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 167
Query: 554 VHEAE---DFINQMACDADIVVWKSLLAS 579
+ EA D I Q D D++ W S++++
Sbjct: 168 LEEASMIFDEITQRGID-DVISWNSIVSA 195
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 158/483 (32%), Positives = 248/483 (51%), Gaps = 46/483 (9%)
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD-ARNVFSG 196
+F ++ CS L + ++HA V+ + G +L+ LI +D AR +F
Sbjct: 31 SFNYLLNCCSSLPDLS---RIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQ 87
Query: 197 IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA---- 252
+ ++DV W ++I ++ G EAL ++ M H P+ + F V +C+ +
Sbjct: 88 MPKRDVFLWNTLIRGYADAGPCEEALALYSNM-HGAGLFPDNYTFPFVVRSCAVLSALRE 146
Query: 253 ------------------------------------RILFNEIDSPDLASWNALIAGVAS 276
++F E+ ++ SW A+IAG
Sbjct: 147 GKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQ 206
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
+ E + +F EM P+ +T+ S+L AC G L G +H Y IK+G D +V +
Sbjct: 207 NRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSL 266
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
NA++ +Y KC + A +F + + VSWN++IAA Q+N +LF RM A +
Sbjct: 267 TNALIALYGKCGNVETARSLFDGMVVQ-NLVSWNAMIAAYEQNNAGANAVKLFRRMQAEK 325
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
+ D+IT V+ ACA + +L +H + + GL +V + N L+D+Y KCG++ AR
Sbjct: 326 VDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAR 385
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
++F + VVSW+S+I A G G++ALKLF+RM+ GV PN T V TAC H G
Sbjct: 386 EVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSG 445
Query: 517 LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
LVEEG + M +Y I+P EHC+C+VDLL RAG + EA +FI++M + D+ VW +L
Sbjct: 446 LVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGAL 505
Query: 577 LAS 579
L S
Sbjct: 506 LGS 508
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 157/567 (27%), Positives = 262/567 (46%), Gaps = 67/567 (11%)
Query: 20 VAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH-ILN 78
V +DF TN R Y L++ CSSL L ++H ++ + C +++L I+
Sbjct: 19 VLFDF---RTNYHSRSFNY--LLNCCSSLPDLS---RIHALVVTNGCGQNLLLSTKLIIT 70
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
+++ AR FD+MP+R+V W +I G + +A+ LY M +G+ P +T
Sbjct: 71 ACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYT 130
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
F ++++C+ L ++ G+++H +++K S + Q++L+AMY++ L VF +
Sbjct: 131 FPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMV 190
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------- 251
+++ SW ++IA + + Y E L F EM+ G QPN SV AC+
Sbjct: 191 VRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGT-QPNAVTLVSVLPACAGLEFLNLGK 249
Query: 252 ---------------------------------ARILFNEIDSPDLASWNALIAGVASHS 278
AR LF+ + +L SWNA+IA ++
Sbjct: 250 LIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNN 309
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
A+ LF M+ ++ D +T+ S++ AC L G +H + + G + NV + N
Sbjct: 310 AGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITN 369
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
A++ MYAKC + A VF+ L + VSW S+I AC H E+ +LFSRM +K
Sbjct: 370 ALIDMYAKCGNIDLAREVFERLPCRS-VVSWTSMIGACASHGHGEDALKLFSRMKDEGVK 428
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG------LMDIYIKCGSL 452
P+ TF V AC +E + + + D +M G ++D+ + GSL
Sbjct: 429 PNSFTFAAVFTACRHSGLVEEGRKHFESMMR-----DYSIMPGVEHCACMVDLLGRAGSL 483
Query: 453 GSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
A + + M PDV W +L LG + E +L L + P VT +++
Sbjct: 484 MEAYEFIDKMPVEPDVSVWGAL-LGSCRIHSNLELAELVAEKLFL-LDPQTVTFYVLMSN 541
Query: 512 C-SHVGLVEEGLHLYRIM-ENEYGIIP 536
+ G E+ L ++M E E IP
Sbjct: 542 IYAEAGRWEDAARLRKLMEERELKKIP 568
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/556 (31%), Positives = 271/556 (48%), Gaps = 53/556 (9%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D L N I+ MYGKC S EDAR FD++ QRN SW+ ++ QN +A+++Y +M+
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
+ + +T S++ AC+ L V GR + + ++ +LI ++ K +
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 189 DARNVFSGI-ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
+A +VF + A +D+ S +MI A+ + G AL + +M G +P+ F + ++ A
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQG-LEPDAFTYAAILGA 179
Query: 248 CSN-------------------FARI---------------------LFNEIDSPDLASW 267
CS+ F I LF +D D+ SW
Sbjct: 180 CSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSW 239
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
NA+IA + + +A SLF M PD T S+L AC L G +H I
Sbjct: 240 NAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITA 299
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVF-----KELGKNADSVSWNSIIAACLQHNQA 382
GFD + + N +++M+ +C L +A F KELG +WN+++AA Q ++
Sbjct: 300 RGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELG------AWNTMLAAYAQFDKG 353
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
++ L+ ML PD TF+ V+ +CA + +L +H T G DV + L
Sbjct: 354 KDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTAL 413
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+++Y KCGSL A+K F+ + N DVVSWS++I AQ G +EAL+L M G++ N
Sbjct: 414 VNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNE 473
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
VT VL ACSH G + EG+ + + ++GI E+ +DLL RAG + EAE ++
Sbjct: 474 VTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLH 533
Query: 563 QMACDADIVVWKSLLA 578
M V +LL
Sbjct: 534 TMPFKVSFVALVTLLG 549
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 237/503 (47%), Gaps = 47/503 (9%)
Query: 14 LYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQ 73
+Y EAL Y I I T + +++AC+ L ++ GR V + DVV+
Sbjct: 48 MYQEALEVYK-EMVRKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVA 106
Query: 74 NHILNMYGKCGSLEDARMGFDKM-PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
+++++ KCG LE+A F M R+++S TAMI ++ + + A+ Y +M G+
Sbjct: 107 TSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGL 166
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
P FT+ +I+ ACS + G+ +H H+++S+H ++ +NALI MY K + D+++
Sbjct: 167 EPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKS 226
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-- 250
+F + KDV SW +MIAA++ G++ +A F+ M G + P+ + F S+ AC++
Sbjct: 227 LFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLG-HTPDIYTFSSILGACASPK 285
Query: 251 --------------------------------------FARILFNEIDSPDLASWNALIA 272
AR F I+ +L +WN ++A
Sbjct: 286 RLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLA 345
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
A +A+ L+ M PD T S++ +C L +G +H GF+
Sbjct: 346 AYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEK 405
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
+V + A++ MYAKC L +A F + N D VSW+++IAA QH AEE L M
Sbjct: 406 DVILGTALVNMYAKCGSLADAKKSFDGIS-NKDVVSWSAMIAASAQHGHAEEALELSHLM 464
Query: 393 LASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
I + +T + V+ AC+ L E + G+ D G +D+ + G
Sbjct: 465 NLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGW 524
Query: 452 LGSARKLFNFMENPDVVSWSSLI 474
L A + + M P VS+ +L+
Sbjct: 525 LKEAEHVLHTM--PFKVSFVALV 545
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 172/329 (52%), Gaps = 4/329 (1%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR +F+ I + SW+ L+ ++ EA+ ++ EM +E+ D T+ S+L AC
Sbjct: 21 ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRKEISIDAYTLSSVLAACTK 80
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
L + +G V ++GF+ +V V +++ ++AKC L A VF+ +G D +S +
Sbjct: 81 LLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTA 140
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+I A ++H + + + +M + ++PD T+ ++GAC+ L +H +I ++
Sbjct: 141 MIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESK 200
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
++ V N L+ +Y KCGSL ++ LF M+ DVVSW+++I Y +G +A LF
Sbjct: 201 HFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFH 260
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLAR 550
RM +LG +P++ T +L AC+ +E+G L+ RI G + ++ + R
Sbjct: 261 RMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITAR--GFDRDFAMQNNLISMFTR 318
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
G + A + + ++ W ++LA+
Sbjct: 319 CGSLESARRYFYSIE-KKELGAWNTMLAA 346
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/501 (32%), Positives = 266/501 (53%), Gaps = 38/501 (7%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
+Y L D+ F+ + ++W ++I + + + ++ +I ML SG+ P
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
F S++K+C+ L + LG LH ++I+ L NAL+ MY+K R L+ SG
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKL-RFLEE----SGRQ 163
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE 258
R L A F+EM + SV S S R +F
Sbjct: 164 R-------------------LGAGEVFDEMTE----RTRSVRTVSVLSEDS--VRKIFEM 198
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ DL SWN +IAG A + E + + EM L PD T+ S+L + + +G
Sbjct: 199 MPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRG 258
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
++H I+ G D+++ V ++++ MYAKC+ + ++ VF L + D +SWNSIIA C+Q
Sbjct: 259 KEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTER-DGISWNSIIAGCVQ 317
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+ +E R F +ML ++IKP +F+ +M ACA + +L + QLH YIT+ G ++F+
Sbjct: 318 NGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFI 377
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
+ L+D+Y KCG++ +A+++F+ M D+VSW+++I+G A G +A++LF +M + G+
Sbjct: 378 ASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGI 437
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAE 558
VLTACSH GLV+E + M ++GI P EH + V DLL RAG + EA
Sbjct: 438 K-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAY 490
Query: 559 DFINQMACDADIVVWKSLLAS 579
DFI M +W +LL++
Sbjct: 491 DFICGMHIGPTGSIWATLLSA 511
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 125/248 (50%), Gaps = 9/248 (3%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + LY E L N++ T + ++ + + G+++H +
Sbjct: 208 NTIIAGNARNGLYEETLRMIR-EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSI 266
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
D+ + + +++MY KC + D+ F + +R+ +SW ++IAGC QN ++ ++
Sbjct: 267 RQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLR 326
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ QML + + P ++F SI+ AC+ L ++ LG+QLH ++ ++ ++ ++L+ MY
Sbjct: 327 FFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYA 386
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I A+ +F + +D+ SW +MI + G +A+ F +M G
Sbjct: 387 KCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEG--------IK 438
Query: 243 SVFSACSN 250
+V +ACS+
Sbjct: 439 AVLTACSH 446
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 179/439 (40%), Gaps = 83/439 (18%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA---RMG 92
+ + ++ +C+ L L LG +H +I+ D+ N ++NMY K LE++ R+G
Sbjct: 107 NVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLG 166
Query: 93 -----------------------------FDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
F+ MP++++VSW +IAG ++N + +++
Sbjct: 167 AGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRM 226
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+M + + P FT S++ + + G+++H I+ + + ++LI MY K
Sbjct: 227 IREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAK 286
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
R+ D+ VF+ + +D SW S+IA + G E L F +ML +P + F S
Sbjct: 287 CTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQML-MAKIKPKSYSFSS 345
Query: 244 VFSACSNF----------------------------------------ARILFNEIDSPD 263
+ AC++ A+ +F+ + D
Sbjct: 346 IMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRD 405
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI-GRLTLYQGMQVH 322
+ SW A+I G A H A +A+ LF +M + ++L AC G L +
Sbjct: 406 MVSWTAMIMGCALHGQAPDAIELFEQMETE-------GIKAVLTACSHGGLVDEAWKYFN 458
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
S G V A+ + + L A + W ++++AC H
Sbjct: 459 SMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNI 518
Query: 383 EELFRLFSRMLASQIKPDH 401
+ ++ +R+L ++ P++
Sbjct: 519 DMAEKVANRIL--EVDPNN 535
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 132/300 (44%), Gaps = 48/300 (16%)
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
Q Q+H+ ++K S + +L++Y+ ++L ++L +F + +++W S+I
Sbjct: 24 QAQQLHAQVLKFQASSLC-NLSLLLSIYSHINLLHDSLRLFNTI-HFPPALAWKSVIRCY 81
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
H + F MLAS + PDH F V+ +CA + L + LH YI + GL FD+
Sbjct: 82 TSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDL 141
Query: 437 FVMNGLMDIYIKCGSL--------------------------------GSARKLFNFMEN 464
+ N LM++Y K L S RK+F M
Sbjct: 142 YTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPE 201
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
D+VSW+++I G A+ G +E L++ M + P+ TL VL L+ E + +
Sbjct: 202 KDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLP------LIAENVDI 255
Query: 525 YRIME-----NEYGIIPTREHCSCVVDLLARAGCVHEAED-FINQMACDADIVVWKSLLA 578
R E G+ S ++D+ A+ C A+ + + + D + W S++A
Sbjct: 256 SRGKEIHGCSIRQGLDADIYVASSLIDMYAK--CTRVADSCRVFTLLTERDGISWNSIIA 313
>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
Length = 967
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 246/483 (50%), Gaps = 57/483 (11%)
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI---IKACSGLGSVCLGRQLH 159
SW I + Q AI L++QM ++ V P S+ +K+C+GLG L LH
Sbjct: 331 SWAYQIRMAASQGQFLHAISLFLQM-RASVAPRSSVPASLPAALKSCAGLGLCTLAASLH 389
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
A I+S + NAL+ + K G+
Sbjct: 390 ALAIRSGSFADRFTANALLNLCIKLP------------------------------GF-- 417
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSN 279
HH G + SA R +F+E+ D SWN LI G A H
Sbjct: 418 ----------HHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKR 467
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLL-----CACIGRLTLYQGMQVHSYIIKMGFDSNV 334
EA+S+ EM +PD T+ ++L CA I R GM VH Y IK GFD++V
Sbjct: 468 HQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKR-----GMVVHGYAIKNGFDNDV 522
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V ++++ MYA C+ + ++ VF + D+V WNS++A Q+ EE +F RML
Sbjct: 523 FVGSSLIDMYANCTQMDYSMKVFDSF-SDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQ 581
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
+ ++P +TF+ ++ A ++ L + QLH Y+ + ++F+ + L+D+Y KCG++
Sbjct: 582 AGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDI 641
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
AR++FN +++PD+VSW+++I+GYA G EA LF RM V PN +T + VLTACSH
Sbjct: 642 ARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSH 701
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
GLV+ G + M N+YG +P+ EHC+ + D L RAG + EA +FI++M VW
Sbjct: 702 AGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWS 761
Query: 575 SLL 577
+LL
Sbjct: 762 TLL 764
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 143/284 (50%), Gaps = 17/284 (5%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
ST + + C+ ++ G VH + + + DV + + +++MY C ++ + FD
Sbjct: 491 STVLPIFAECADIKR---GMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDS 547
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ V W +M+AG +QN +A+ ++ +MLQ+GV P TF S+I A L + LG
Sbjct: 548 FSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLG 607
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+QLHA++I++ ++ ++LI MY K + AR VF+GI D+ SW +MI ++
Sbjct: 608 KQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALH 667
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS-----PDLA 265
G EA F E + G +PN F +V +ACS+ + FN + + P L
Sbjct: 668 GPTTEAFVLF-ERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLE 726
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
AL + + +EA + SEM+ + P +LL AC
Sbjct: 727 HCAALADTLGRAGDLDEAYNFISEMK---IKPTSSVWSTLLRAC 767
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 175/431 (40%), Gaps = 69/431 (16%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNM----------YGKCG 84
P++ + +C+ L L +H + S D N +LN+ +G G
Sbjct: 366 PASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNG 425
Query: 85 ----------SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
+ E R FD+M +R+ VSW +I GC+++ + +A+ + +M + G MP
Sbjct: 426 PSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMP 485
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
FT +++ + + G +H + IK+ + + ++LI MY ++ + VF
Sbjct: 486 DTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVF 545
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--- 251
+ D W SM+A +++ G EAL F ML G +P F S+ A N
Sbjct: 546 DSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGV-RPVPVTFSSLIPAFGNLSLL 604
Query: 252 -------------------------------------ARILFNEIDSPDLASWNALIAGV 274
AR +FN I SPD+ SW A+I G
Sbjct: 605 RLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGY 664
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSN 333
A H EA LF M + P+ +T ++L AC + G + +S + GF +
Sbjct: 665 ALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPS 724
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELF 386
+ C A+ + L A E+ S W++++ AC H A+++F
Sbjct: 725 LEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIF 784
Query: 387 RLFSRMLASQI 397
L + + S +
Sbjct: 785 ELEPKSMGSHV 795
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 85/159 (53%), Gaps = 16/159 (10%)
Query: 8 SLCKQNLYNEALVAYDFSQNNT--------------NIRIRPSTYAGLISACSSLRSLQL 53
S C L+N L Y +QN + +R P T++ LI A +L L+L
Sbjct: 549 SDCDAVLWNSMLAGY--AQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRL 606
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ 113
G+++H +++ ++ ++ + + +++MY KCG+++ AR F+ + ++VSWTAMI G +
Sbjct: 607 GKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYAL 666
Query: 114 NYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
+ +A L+ +M V P TF +++ ACS G V
Sbjct: 667 HGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLV 705
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 97/238 (40%), Gaps = 34/238 (14%)
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI--TFNDVMGACAKMASLEMVTQLHC 425
SW I Q LF +M AS + + + +CA + + LH
Sbjct: 331 SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 390
Query: 426 YITKTGLAFDVFVMNGLMDIYIKC---------------GSLGSA-----RKLFNFMENP 465
++G D F N L+++ IK G L SA RK+F+ M
Sbjct: 391 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 450
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT---ACSHV--GLVEE 520
D VSW++LILG A+ EAL + M G P+ TL VL C+ + G+V
Sbjct: 451 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 510
Query: 521 GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G + +N+ + S ++D+ A + + + + D D V+W S+LA
Sbjct: 511 GYAIKNGFDNDVFV------GSSLIDMYANCTQMDYSMKVFDSFS-DCDAVLWNSMLA 561
>gi|302782105|ref|XP_002972826.1| hypothetical protein SELMODRAFT_173139 [Selaginella moellendorffii]
gi|300159427|gb|EFJ26047.1| hypothetical protein SELMODRAFT_173139 [Selaginella moellendorffii]
Length = 624
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 177/582 (30%), Positives = 288/582 (49%), Gaps = 58/582 (9%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L S CSSL G+ H + + D V N +NMYGK G +E A++ FD++ +R+
Sbjct: 17 LSSGCSSLAQ---GKLAHACLSEATSGSDRVAGNAAINMYGKFGCVESAKVVFDRVLERD 73
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+++WT M++ +QN A +++ +ML GV+P + TF +I+ ACS
Sbjct: 74 IITWTLMVSAYAQNGHTRQAFQVFGKMLVEGVVPNKVTFLAILNACSSSSEAAF-----V 128
Query: 161 HVIKSEHGSHLIA--QNALIAMYTKFDRILDARNVFSGIARK-DVTSWGSMIAAFSKLGY 217
H + E G A +++L+ Y K + AR VFS + K +V +W + I A +
Sbjct: 129 HRLLFESGFQFTAKVESSLVDAYGKCKNVSAARAVFSSMTDKTNVVTWNAFIRALASSRD 188
Query: 218 ELEALCHFNEML--------------HHGAYQPNEF------------------------ 239
AL F +L GA P E
Sbjct: 189 ASGALQTFRSLLLQGLVPDTVTFINASQGAKTPPEAKYLEACRQESGVQLDVALGNTLIN 248
Query: 240 IFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPD 298
+FG C AR +F+ + ++ SWNA+++ + + + E ++LF +M + + PD
Sbjct: 249 MFGGSSQPCE--ARRVFDATHNKNIVSWNAMLSAYSQNGHFEETIALFKQMASTKTVKPD 306
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
LT S+L +C L +G H+ ++ G + VPV ++ MY+KC L A +F
Sbjct: 307 KLTFASVLSSCANLENLREGKLAHAAAVEAGLEFAVPVAATLIQMYSKCHCLEEARDIFS 366
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
++D V+W +I+A Q+ + +E LF RM + PD + F V+GACA +LE
Sbjct: 367 R-SPSSDVVAWTVMISAYAQNGRPQEAIALFFRM---TVPPDGVAFATVLGACASSENLE 422
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
+ I + GL + V N ++D+Y KC + ++F M D VSW++++ YA
Sbjct: 423 AGRVVRAQIVELGLDAERAVANAVLDLYGKCAEIVETAEIFGRMRQRDRVSWNTMVAAYA 482
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
+ G +L F M+ GV P+ V+LV L+ SH GLVE+G + + ++YG++P+R
Sbjct: 483 RAGHTAGSLWCFRAMQLEGVCPSEVSLVSALSTYSHAGLVEQGCQCFASIASDYGMVPSR 542
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMA-CDADIVVWKSLLAS 579
E CVVDLL RAG AED I +A + +WK++L++
Sbjct: 543 EQQGCVVDLLGRAGS-WIAEDLIRVVAPSTSRSELWKAVLSA 583
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 130/243 (53%), Gaps = 10/243 (4%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
QN + E +A F Q + ++P T+A ++S+C++L +L+ G+ H + + +
Sbjct: 283 QNGHFEETIAL-FKQMASTKTVKPDKLTFASVLSSCANLENLREGKLAHAAAVEAGLEFA 341
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
V + ++ MY KC LE+AR F + P +VV+WT MI+ +QN + +AI L+ +M
Sbjct: 342 VPVAATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGRPQEAIALFFRMT- 400
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD 189
V P F +++ AC+ ++ GR + A +++ + NA++ +Y K I++
Sbjct: 401 --VPPDGVAFATVLGACASSENLEAGRVVRAQIVELGLDAERAVANAVLDLYGKCAEIVE 458
Query: 190 ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
+F + ++D SW +M+AA+++ G+ +L F M G P+E S+ SA S
Sbjct: 459 TAEIFGRMRQRDRVSWNTMVAAYARAGHTAGSLWCFRAMQLEGVC-PSEV---SLVSALS 514
Query: 250 NFA 252
++
Sbjct: 515 TYS 517
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+A ++ AC+S +L+ GR V I+ + + N +L++YGKC + + F +M
Sbjct: 408 FATVLGACASSENLEAGRVVRAQIVELGLDAERAVANAVLDLYGKCAEIVETAEIFGRMR 467
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
QR+ VSW M+A ++ ++ + M GV P + + S + S G V G Q
Sbjct: 468 QRDRVSWNTMVAAYARAGHTAGSLWCFRAMQLEGVCPSEVSLVSALSTYSHAGLVEQGCQ 527
Query: 158 LHAHVIKSEHG 168
A I S++G
Sbjct: 528 CFAS-IASDYG 537
>gi|357495605|ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519426|gb|AET01050.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 175/616 (28%), Positives = 298/616 (48%), Gaps = 51/616 (8%)
Query: 13 NLYNEALVAYDFSQNNTNI-RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQ---- 67
NL ++AL+ Y ++N++ P T++ + AC+ + + G+ +H H L S
Sbjct: 94 NLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKACALTKDILTGKAIHSHFLRSHSNTNTG 153
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
P ++ N +LNMY C E A FD M +RNVV+W +I + + A++ + M
Sbjct: 154 PSRIVYNSLLNMYASCQH-EYALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANM 212
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK--SEHGSHLIAQNALIAMYTKFD 185
+ VMP TF ++ A S LG + + + K ++ S + ++ I M++
Sbjct: 213 INQSVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVG 272
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ AR VF K+ W +MI A+ + +EA+ F + L ++ SV
Sbjct: 273 CMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVL 332
Query: 246 SACSNFARI----------------------------------------LFNEIDSPDLA 265
+A S +I +F+++ D
Sbjct: 333 TAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAV 392
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SWN +I+ + EA+ L EM+ ++ L D +T +LL A LY G Q H+Y+
Sbjct: 393 SWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYL 452
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE-LGKNADSVSWNSIIAACLQHNQAEE 384
I+ G + + ++ MYAK + A L+F++ + D +WN+IIA Q+ E+
Sbjct: 453 IRRGIQFE-GMESYLIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEK 511
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
L +ML + P+ +T ++ AC+ M S+ + QLH + + L +V+V L D
Sbjct: 512 AILLLKQMLVQNVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTD 571
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
Y KCG++ A +F + V+++++++ Y Q G G AL L+ M G+ P+ VT
Sbjct: 572 TYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVT 631
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
V +L+AC++ GLV+EGL ++ ME + I P+ EH CV D+L R G V EA +F+ +
Sbjct: 632 FVAILSACNYSGLVDEGLQIFESMEKVHKIKPSIEHYCCVADMLGRVGRVVEAYEFVKGL 691
Query: 565 ACDADIV-VWKSLLAS 579
DA+ + +W SLL S
Sbjct: 692 GEDANTMEIWGSLLGS 707
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 124/240 (51%), Gaps = 4/240 (1%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN ++E + I T L+SA S+LR+L +G++ H +++ Q +
Sbjct: 403 QNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEG- 461
Query: 72 LQNHILNMYGKCGSLEDARMGFDK--MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
+++++++MY K GS+ A + F++ R+ +W A+IAG +QN AI L QML
Sbjct: 462 MESYLIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLV 521
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD 189
V+P T SI+ ACS +GS+ L RQLH I+ ++ +L Y+K I
Sbjct: 522 QNVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISY 581
Query: 190 ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
A NVF K+ ++ +M+ + + G AL ++ ML G +P+ F ++ SAC+
Sbjct: 582 AENVFLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGI-RPDAVTFVAILSACN 640
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 166/337 (49%), Gaps = 19/337 (5%)
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP--DGLTVHSLLCACIGR 312
L + + P WN++I G ++ ++A+ L+++MR D T S L AC
Sbjct: 71 LLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKACALT 130
Query: 313 LTLYQGMQVHSYIIKMGFDSNV-P---VCNAILTMYAKCSVLCNALLVFKELGKNADSVS 368
+ G +HS+ ++ ++N P V N++L MYA C AL VF ++ + + V+
Sbjct: 131 KDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQHEY-ALNVF-DVMRRRNVVA 188
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
WN++I + ++ N+ + F+ M+ + P +TF ++ A +K+ V + ++
Sbjct: 189 WNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMR 248
Query: 429 KTGLAF--DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
K G + DVFV++ + ++ G + AR +F+ N + W+++I+ Y Q C EA
Sbjct: 249 KFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEA 308
Query: 487 LKLFTRM--RSLGVSPNLVTLVGVLTACSHVGLVE--EGLHLYRIMENEYGIIPTREHCS 542
+ +F + GV + VTL+ VLTA S + ++ E H + I +I +
Sbjct: 309 IDVFIQALESEEGVCDD-VTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIII---LN 364
Query: 543 CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
V+ + +R V + ++M + D V W +++++
Sbjct: 365 AVMVMYSRCNHVDTSLKVFDKM-LERDAVSWNTIISA 400
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 158/487 (32%), Positives = 239/487 (49%), Gaps = 41/487 (8%)
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P TF +++K C+ + GR +HA + S IA AL MY K R DAR V
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML-HHGAYQPNEFIFGSVFSACSNF- 251
F + +D +W +++A +++ G A+ M G +P+ SV AC++
Sbjct: 74 FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133
Query: 252 ---------------------------------------ARILFNEIDSPDLASWNALIA 272
AR +F+ + + SWNA+I
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A + NA EAM+LF M + +V + L AC L + +VH ++++G S
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSS 253
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
NV V NA++T YAKC A VF ELG +SWN++I Q+ E+ RLF+RM
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM 313
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
++PD T V+ A A ++ +H Y + L DV+V+ L+D+Y KCG +
Sbjct: 314 QLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRV 373
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
AR+LF+ + V++W+++I GY G G A++LF M+ G PN T + VL AC
Sbjct: 374 SIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAAC 433
Query: 513 SHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
SH GLV+EG + M+ +YG+ P EH +VDLL RAG + EA FI M + I V
Sbjct: 434 SHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISV 493
Query: 573 WKSLLAS 579
+ ++L +
Sbjct: 494 YGAMLGA 500
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 206/471 (43%), Gaps = 47/471 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L+ C++ L GR VH + + + + NMY KC DAR FD+M
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQML--QSGVMPGQFTFGSIIKACSGLGSVCL 154
P R+ V+W A++AG ++N + A++ ++M + G P T S++ AC+ ++
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
R++HA +++ + A++ Y K + AR VF + ++ SW +MI ++
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYAD 197
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFG-------------------------------- 242
G EA+ F M+ G + +
Sbjct: 198 NGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSV 257
Query: 243 -----SVFSAC--SNFARILFNEI-DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+ ++ C ++ A +FNE+ + SWNA+I G + +A LF+ M+
Sbjct: 258 TNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLEN 317
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ PD T+ S++ A Q +H Y I+ D +V V A++ MY+KC + A
Sbjct: 318 VRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIAR 377
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F + ++ ++WN++I H + LF M + P+ TF V+ AC+
Sbjct: 378 RLF-DSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHA 436
Query: 415 ASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
++ + + K GL + ++D+ + G L A ++F++N
Sbjct: 437 GLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEA---WSFIKN 484
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 168/394 (42%), Gaps = 45/394 (11%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP T ++ AC+ R+L R+VH L + V + +L+ Y KCG++E AR
Sbjct: 116 RPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARA 175
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD MP RN VSW AMI G + N +A+ L+ +M+Q GV + + ++AC LG
Sbjct: 176 VFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGY 235
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIA 210
+ R++H +++ S++ NALI Y K R A VF+ + +K SW +MI
Sbjct: 236 LDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMIL 295
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-------------------- 250
F++ +A F M +P+ F SV A ++
Sbjct: 296 GFTQNECPEDAERLFARMQLENV-RPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLD 354
Query: 251 --------------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
AR LF+ + +WNA+I G SH A+ LF EM
Sbjct: 355 QDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEM 414
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSV 349
+ LP+ T S+L AC + +G + + + K G + + ++ + +
Sbjct: 415 KGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGK 474
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A K + + +++ AC H E
Sbjct: 475 LDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVE 508
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 172/394 (43%), Gaps = 35/394 (8%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+ AC L L R+VH+ ++ +V + N ++ Y KC + A F+++ +
Sbjct: 227 LQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKT 286
Query: 102 -VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+SW AMI G +QN DA +L+ +M V P FT S+I A + + R +H
Sbjct: 287 RISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHG 346
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+ I+ + + ALI MY+K R+ AR +F + V +W +MI + G+
Sbjct: 347 YSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQA 406
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARILFNEIDSPDLASWNAL 270
A+ F EM G+ PNE F SV +ACS+ FA + + P + + +
Sbjct: 407 AVELFEEMKGTGSL-PNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTM 465
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVH-SLLCACIGRLTLYQGMQVHSYIIKMG 329
+ + +EA S M + G++V+ ++L AC + + I ++G
Sbjct: 466 VDLLGRAGKLDEAWSFIKNMP----IEPGISVYGAMLGACKLHKNVELAEESAQIIFELG 521
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA--DSVSWNSI---------IAACLQ 378
+ V + +YA S+ + V + K + W+ I +
Sbjct: 522 PEEGVYHV-LLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTN 580
Query: 379 HNQAEELFRLFSRMLASQIK-----PDHITFNDV 407
H A++++ ++++ +IK PD + +DV
Sbjct: 581 HQHAKDIYARLAKLI-EEIKDMGYVPDTDSIHDV 613
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
N+R T +I A + + R +H + + + DV + +++MY KCG + A
Sbjct: 317 NVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIA 376
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD R+V++W AMI G + A++L+ +M +G +P + TF S++ ACS
Sbjct: 377 RRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHA 436
Query: 150 GSVCLGRQLHAHVIKSEHG 168
G V G++ A +K ++G
Sbjct: 437 GLVDEGQKYFAS-MKKDYG 454
>gi|147834193|emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
Length = 826
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/519 (31%), Positives = 253/519 (48%), Gaps = 43/519 (8%)
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
NV+SWT+ I+ + Q A+ L+ ML + P T S+I+A SGLG + R +
Sbjct: 53 NVISWTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRVIC 112
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
VIK S + ALI Y+ +D + +F+ KD+ W +M++A K G
Sbjct: 113 GSVIKLGFESEVSVATALIGFYSDYDMGI-VWKIFNQTPIKDLVLWSAMVSACVKSGQYG 171
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILF----------------------- 256
EA F M + G +PN S+ AC+N +LF
Sbjct: 172 EAFEIFRAMQYDGV-EPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSL 230
Query: 257 -----------------NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
++I DL SW +I G + EA FS M+ D
Sbjct: 231 VDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADE 290
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
V L+ A I G+ H +++K G + V + A+L MYAK L +A++VF +
Sbjct: 291 TIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQ 350
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
L K D +SW+++I+ F +M ++ +P+ ITF ++ AC+ + + E+
Sbjct: 351 LNKK-DYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQEL 409
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
+ + TK G + F+ + L+D+Y K G + R +FN + D+V WSS+I GY
Sbjct: 410 GESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGL 469
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTRE 539
GCGDEAL+ F+ M + GV PN V + VL+ACSH GL EG + ME +YGIIP
Sbjct: 470 NGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLP 529
Query: 540 HCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
H +C+VDL++R G + A F+N+M + D +W +LLA
Sbjct: 530 HYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLA 568
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 129/521 (24%), Positives = 231/521 (44%), Gaps = 62/521 (11%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILL 63
+SSL KQN ++ +A + RP+ T +I A S L + R + ++
Sbjct: 61 ISSLVKQN---QSELAVGLFKMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRVICGSVIK 117
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMG-----FDKMPQRNVVSWTAMIAGCSQNYQEN 118
+ +V + ++ Y D MG F++ P +++V W+AM++ C ++ Q
Sbjct: 118 LGFESEVSVATALIGFYS------DYDMGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYG 171
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
+A +++ M GV P + SI+ AC+ +G++ G+++H IK N+L+
Sbjct: 172 EAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLV 231
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMI-------------AAFSKLGYE------- 218
MY K + VF I KD+ SW ++I AFS++ +
Sbjct: 232 DMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADET 291
Query: 219 ---------LEALCHFNEMLHHGAYQPNEFI-FGSVFSACSNF---------ARILFNEI 259
++A H + HG N + F S+ +A A I+F+++
Sbjct: 292 IVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQL 351
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC--IGRLTLYQ 317
+ D SW+A+I+ A + A+ F +M+ + P+ +T SLL AC IG L +
Sbjct: 352 NKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGE 411
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
+Q H+ K G+ SN + +A++ +Y K + +F E+ D V W+S+I
Sbjct: 412 SIQAHA--TKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEI-PTKDLVCWSSMINGYG 468
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA-SLEMVTQLHCYITKTGLAFDV 436
+ +E FS MLA +KP+ + F V+ AC+ E + K G+ +
Sbjct: 469 LNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKL 528
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILG 476
++D+ + G++ A + N M PD W +L+ G
Sbjct: 529 PHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAG 569
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 138/279 (49%), Gaps = 14/279 (5%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
LI A + G H +L + V + +L MY K G LE A + FD++ +++
Sbjct: 296 LIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKD 355
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+SW+AMI+ + + +A++ + QM + P + TF S+++ACS +G+ LG + A
Sbjct: 356 YISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQA 415
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
H K+ + S+ +ALI +Y KF RI R +F+ I KD+ W SMI + G E
Sbjct: 416 HATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDE 475
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARILFNEIDSPDLASWNAL 270
AL F+ ML G +PNE +F SV SACS+ F+ + P L + +
Sbjct: 476 ALETFSNMLACGV-KPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYACM 534
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+ ++ N A+ ++M + PD +LL C
Sbjct: 535 VDLISRRGNIEGALQFVNKM---PMEPDKRIWGALLAGC 570
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/471 (22%), Positives = 200/471 (42%), Gaps = 49/471 (10%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILL 63
VS+ K Y EA + Q + + P+ + ++ AC+++ +L G+++H +
Sbjct: 161 VSACVKSGQYGEAFEIFRAMQYDG---VEPNHVSIVSILPACANVGALLFGKEIHGFSIK 217
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
P + N +++MY KC + + + + FD++ +++++SWT +I GC +N +A K
Sbjct: 218 KMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKA 277
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ +M S + +I A G H ++K+ + + AL+ MY K
Sbjct: 278 FSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAK 337
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
F + A VF + +KD SW +MI+ + + AL F +M +PNE F S
Sbjct: 338 FGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQM-QSTDERPNEITFVS 396
Query: 244 VFSACS----------------------------------------NFARILFNEIDSPD 263
+ ACS N R +FNEI + D
Sbjct: 397 LLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKD 456
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
L W+++I G + +EA+ FS M + P+ + S+L AC ++G S
Sbjct: 457 LVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFS 516
Query: 324 YI-IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ K G +P ++ + ++ + AL ++ D W +++A C + +
Sbjct: 517 SMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGS 576
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGAC-AKMASLEMVTQLHCYITKTGL 432
E+ L + L + P + ++ ++ A+ V +L + + GL
Sbjct: 577 IEIAELVAERLIG-LDPQNTSYYVILSNLYAEQGRWGDVERLRKLVDEKGL 626
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 180/368 (48%), Gaps = 23/368 (6%)
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHS 278
E + N + + AY + S+F+ + + + + ++ SW + I+ + +
Sbjct: 12 FEEITQRNVFIRNSAYS---LYYRSMFNTYAYYEEPVEFHGEKDNVISWTSKISSLVKQN 68
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH-SYIIKMGFDSNVPVC 337
+ A+ LF M E P+ +TV S++ A G L L M+V +IK+GF+S V V
Sbjct: 69 QSELAVGLFKMMLMTEQRPNHVTVLSVIRAISG-LGLEDMMRVICGSVIKLGFESEVSVA 127
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNA--DSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
A++ Y+ + +V+K + D V W+++++AC++ Q E F +F M
Sbjct: 128 TALIGFYSD----YDMGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYD 183
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA 455
++P+H++ ++ ACA + +L ++H + K V N L+D+Y KC + ++
Sbjct: 184 GVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKAS 243
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR--SLGVSPNLVT--LVGVLTA 511
+F+ + D++SW+++I G + C EA K F+RM+ G +V +V ++ A
Sbjct: 244 MLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQA 303
Query: 512 CSH-VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
H G+ G +++N G++ + ++ + A+ G + A +Q+ D
Sbjct: 304 DEHKFGIAFHGF----LLKN--GLLAFVSIGTALLQMYAKFGELESAIIVFDQLN-KKDY 356
Query: 571 VVWKSLLA 578
+ W ++++
Sbjct: 357 ISWSAMIS 364
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 156/496 (31%), Positives = 251/496 (50%), Gaps = 64/496 (12%)
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G + A F ++ + +++ W A+I G +Q + I++Y+ M S V P FTF ++
Sbjct: 48 GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 107
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
KAC G +G+Q+H K GS++ QN+L+
Sbjct: 108 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLV------------------------- 142
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPD 263
SM A F ++ Y ARI+F+++
Sbjct: 143 ---SMYAKFGQISY----------------------------------ARIVFDKLHDRT 165
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+ SW ++I+G + + EA+++F EMR + PD + + S++ A L QG +H
Sbjct: 166 VVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHG 225
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ K+G + + ++ TMYAK ++ A F + K + + WN++I+ + E
Sbjct: 226 LVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEK-PNLILWNAMISGYANNGYGE 284
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
E +LF M+ I+ D IT + A A++ SLE+ L YI+K+ D FV GL+
Sbjct: 285 EAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLI 344
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
D+Y KCGS+ AR +F+ + + DVV WS +I+GY G G EA+ L+ M+ GV PN
Sbjct: 345 DMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDG 404
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
T +G+LTAC + GLV+EG L+ +M ++GI P +H SCVVDLL RAG +++A DFI
Sbjct: 405 TFIGLLTACKNSGLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMS 463
Query: 564 MACDADIVVWKSLLAS 579
M + VW +LL++
Sbjct: 464 MPIKPGVSVWGALLSA 479
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 175/340 (51%), Gaps = 14/340 (4%)
Query: 241 FGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
FG V N+A F E+ PD+ WNA+I G + + + ++ +M+ ++ P+
Sbjct: 47 FGDV-----NYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCF 101
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
T +L AC G G Q+H K GF SNV V N++++MYAK + A +VF +L
Sbjct: 102 TFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKL 161
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
+ VSW SII+ +Q+ E +F M +KPD I VM A + L
Sbjct: 162 -HDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQG 220
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
+H +TK GL F+ ++ L +Y K G + AR FN ME P+++ W+++I GYA
Sbjct: 221 KSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANN 280
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
G G+EA+KLF M + + + +T+ + A + VG +E L R ++ R+
Sbjct: 281 GYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLE----LARWLDGYISKSEYRDD 336
Query: 541 C---SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ ++D+ A+ G ++ A +++A D D+V+W ++
Sbjct: 337 TFVNTGLIDMYAKCGSIYLARCVFDRVA-DKDVVLWSVMI 375
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 172/398 (43%), Gaps = 46/398 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ AC +G+++H +V +QN +++MY K G + AR+ FDK+
Sbjct: 102 TFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKL 161
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R VVSWT++I+G QN +A+ ++ +M Q V P S++ A + + + G+
Sbjct: 162 HDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGK 221
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H V K +L MY K + AR F+ + + ++ W +MI+ ++ G
Sbjct: 222 SIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNG 281
Query: 217 YELEALCHFNEM----------------------------------LHHGAYQPNEFI-- 240
Y EA+ F EM + Y+ + F+
Sbjct: 282 YGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNT 341
Query: 241 -FGSVFSACSN--FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
+++ C + AR +F+ + D+ W+ +I G H + EA+ L++EM+ + P
Sbjct: 342 GLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCP 401
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+ T LL AC + +G ++ + G + + + ++ + + L A
Sbjct: 402 NDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFI 461
Query: 358 KELGKNADSVSWNSIIAACLQHNQ-------AEELFRL 388
+ W ++++AC H + AE+LF L
Sbjct: 462 MSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFIL 499
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 145/317 (45%), Gaps = 42/317 (13%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHI--LLSKCQPDVVLQNHILNMYGKCGSLED 88
++P A +++A +++ L G+ +H + L + +PD+V+ + MY K G +E
Sbjct: 197 VKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVIS--LTTMYAKRGLVEV 254
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
AR F++M + N++ W AMI+G + N +AIKL+ +M+ + T S + A +
Sbjct: 255 ARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQ 314
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+GS+ L R L ++ KSE+ LI MY K I AR VF +A KDV W M
Sbjct: 315 VGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVM 374
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWN 268
I + G+ EA+C +NEM G PN+ F + +AC N +
Sbjct: 375 IMGYGLHGHGQEAICLYNEMKQAGVC-PNDGTFIGLLTACKNSGLV-------------- 419
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPD-GLTVHSLLCACIGRLTLYQGM--QVHSYI 325
E LF L+PD G+ H +C+ L G Q + +I
Sbjct: 420 ------------KEGWELF------HLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFI 461
Query: 326 IKMGFDSNVPVCNAILT 342
+ M V V A+L+
Sbjct: 462 MSMPIKPGVSVWGALLS 478
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 7/203 (3%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
N Y E + NIR+ T + A + + SL+L R + +I S+ + D +
Sbjct: 280 NGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFV 339
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
+++MY KCGS+ AR FD++ ++VV W+ MI G + +AI LY +M Q+GV
Sbjct: 340 NTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGV 399
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLH----AHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
P TF ++ AC G V G +L H I+ H H L+ ++
Sbjct: 400 CPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHH-QHYSCVVDLLGRAGYLNQAY 458
Query: 189 DARNVFSGIARKDVTSWGSMIAA 211
D + S + V+ WG++++A
Sbjct: 459 DF--IMSMPIKPGVSVWGALLSA 479
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L+ + Q++ + +GL F+M ++ + G + A K F + PD++ W+++I G
Sbjct: 15 LKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKG 74
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y Q D ++++ M+ V PN T + VL AC + G ++ +YG
Sbjct: 75 YTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHG-QTFKYGFGS 133
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +V + A+ G + A +++ D +V W S+++
Sbjct: 134 NVFVQNSLVSMYAKFGQISYARIVFDKLH-DRTVVSWTSIIS 174
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 156/496 (31%), Positives = 251/496 (50%), Gaps = 64/496 (12%)
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G + A F ++ + +++ W A+I G +Q + I++Y+ M S V P FTF ++
Sbjct: 33 GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 92
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
KAC G +G+Q+H K GS++ QN+L+
Sbjct: 93 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLV------------------------- 127
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPD 263
SM A F ++ Y ARI+F+++
Sbjct: 128 ---SMYAKFGQISY----------------------------------ARIVFDKLHDRT 150
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+ SW ++I+G + + EA+++F EMR + PD + + S++ A L QG +H
Sbjct: 151 VVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHG 210
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ K+G + + ++ TMYAK ++ A F + K + + WN++I+ + E
Sbjct: 211 LVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEK-PNLILWNAMISGYANNGYGE 269
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
E +LF M+ I+ D IT + A A++ SLE+ L YI+K+ D FV GL+
Sbjct: 270 EAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLI 329
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
D+Y KCGS+ AR +F+ + + DVV WS +I+GY G G EA+ L+ M+ GV PN
Sbjct: 330 DMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDG 389
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
T +G+LTAC + GLV+EG L+ +M ++GI P +H SCVVDLL RAG +++A DFI
Sbjct: 390 TFIGLLTACKNSGLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMS 448
Query: 564 MACDADIVVWKSLLAS 579
M + VW +LL++
Sbjct: 449 MPIKPGVSVWGALLSA 464
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 177/343 (51%), Gaps = 20/343 (5%)
Query: 241 FGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
FG V N+A F E+ PD+ WNA+I G + + + ++ +M+ ++ P+
Sbjct: 32 FGDV-----NYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCF 86
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
T +L AC G G Q+H K GF SNV V N++++MYAK + A +VF +L
Sbjct: 87 TFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKL 146
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
+ VSW SII+ +Q+ E +F M +KPD I VM A + L
Sbjct: 147 -HDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQG 205
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
+H +TK GL F+ ++ L +Y K G + AR FN ME P+++ W+++I GYA
Sbjct: 206 KSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANN 265
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
G G+EA+KLF M + + + +T+ + A + VG +E L R ++ G I E+
Sbjct: 266 GYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLE----LARWLD---GYISKSEY 318
Query: 541 ------CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ ++D+ A+ G ++ A +++A D D+V+W ++
Sbjct: 319 RDDTFVNTGLIDMYAKCGSIYLARCVFDRVA-DKDVVLWSVMI 360
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 175/400 (43%), Gaps = 50/400 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ AC +G+++H +V +QN +++MY K G + AR+ FDK+
Sbjct: 87 TFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKL 146
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R VVSWT++I+G QN +A+ ++ +M Q V P S++ A + + + G+
Sbjct: 147 HDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGK 206
Query: 157 QLHAHVIK--SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
+H V K E ++ +L MY K + AR F+ + + ++ W +MI+ ++
Sbjct: 207 SIHGLVTKLGLEFEPDIVI--SLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYAN 264
Query: 215 LGYELEALCHFNEM----------------------------------LHHGAYQPNEFI 240
GY EA+ F EM + Y+ + F+
Sbjct: 265 NGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFV 324
Query: 241 ---FGSVFSACSN--FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+++ C + AR +F+ + D+ W+ +I G H + EA+ L++EM+ +
Sbjct: 325 NTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGV 384
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ T LL AC + +G ++ + G + + + ++ + + L A
Sbjct: 385 CPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYD 444
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRL 388
+ W ++++AC H + AE+LF L
Sbjct: 445 FIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFIL 484
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 145/317 (45%), Gaps = 42/317 (13%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHI--LLSKCQPDVVLQNHILNMYGKCGSLED 88
++P A +++A +++ L G+ +H + L + +PD+V+ + MY K G +E
Sbjct: 182 VKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVIS--LTTMYAKRGLVEV 239
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
AR F++M + N++ W AMI+G + N +AIKL+ +M+ + T S + A +
Sbjct: 240 ARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQ 299
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+GS+ L R L ++ KSE+ LI MY K I AR VF +A KDV W M
Sbjct: 300 VGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVM 359
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWN 268
I + G+ EA+C +NEM G PN+ F + +AC N +
Sbjct: 360 IMGYGLHGHGQEAICLYNEMKQAGVC-PNDGTFIGLLTACKNSGLV-------------- 404
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPD-GLTVHSLLCACIGRLTLYQGM--QVHSYI 325
E LF L+PD G+ H +C+ L G Q + +I
Sbjct: 405 ------------KEGWELF------HLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFI 446
Query: 326 IKMGFDSNVPVCNAILT 342
+ M V V A+L+
Sbjct: 447 MSMPIKPGVSVWGALLS 463
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 7/203 (3%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
N Y E + NIR+ T + A + + SL+L R + +I S+ + D +
Sbjct: 265 NGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFV 324
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
+++MY KCGS+ AR FD++ ++VV W+ MI G + +AI LY +M Q+GV
Sbjct: 325 NTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGV 384
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLH----AHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
P TF ++ AC G V G +L H I+ H H L+ ++
Sbjct: 385 CPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHH-QHYSCVVDLLGRAGYLNQAY 443
Query: 189 DARNVFSGIARKDVTSWGSMIAA 211
D + S + V+ WG++++A
Sbjct: 444 DF--IMSMPIKPGVSVWGALLSA 464
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
Q++ + +GL F+M ++ + G + A K F + PD++ W+++I GY Q
Sbjct: 5 QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 64
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC 541
D ++++ M+ V PN T + VL AC + G ++ +YG
Sbjct: 65 IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHG-QTFKYGFGSNVFVQ 123
Query: 542 SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +V + A+ G + A +++ D +V W S+++
Sbjct: 124 NSLVSMYAKFGQISYARIVFDKLH-DRTVVSWTSIIS 159
>gi|224141133|ref|XP_002323929.1| predicted protein [Populus trichocarpa]
gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa]
Length = 770
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 179/590 (30%), Positives = 299/590 (50%), Gaps = 62/590 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T A + AC LG ++H ++ + ++ N ++NMY K G A F+ +
Sbjct: 68 TVANALKACRGYP--LLGSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIFENL 125
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC--SGLGSVCL 154
++VSW +++GC + DA +M SGV+ T+ +++ C +
Sbjct: 126 THPDIVSWNTVLSGCQTS---EDAFSFACKMNSSGVVFDAVTYTTVLSFCWRHVEAYFLI 182
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G QLH+ ++K + NALI+MY+++ +++AR VF + +D+ SW +MI+ +S+
Sbjct: 183 GLQLHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQ 242
Query: 215 LG-YELEALCHFNEMLHHGAYQPNEFIFGSVFSAC------------------------- 248
G Y LEA+ F +M G + + F S SAC
Sbjct: 243 EGIYGLEAISMFLQMFR-GGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHV 301
Query: 249 --SNF-------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
SN AR++F ++ ++ SW +I+ + EA+S F+EMR
Sbjct: 302 AVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMIS-----IDEAEAVSFFNEMRLD 356
Query: 294 ELLPDGLTVHSLLCA-CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ P+ +T L+ A IG L + QG VH + K GF S VCN+I+TMYAK + +
Sbjct: 357 GVYPNDVTFVGLIHAITIGELVV-QGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQD 415
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR-LFSRMLASQIKPDHITFNDVMGA- 410
++ VF+EL K D ++WN++I+ + + +E R FS ++ S KP+ +F ++ A
Sbjct: 416 SVKVFQEL-KYQDIIAWNALISGFVHNGLCQEAIRAFFSGLIES--KPNQYSFGSILNAI 472
Query: 411 -CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
A+ SL+ + H I K GL D V + L+D+Y K GS+ ++K+F +
Sbjct: 473 GAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQFA 532
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+++I YA+ G + + F MR L V P+ +T + +LTAC G+V+ G HL+ M
Sbjct: 533 WTTIISAYARHGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFGSMV 592
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+Y I P+ EH SC+VD+L RAG + EAE ++ + + V +SLL +
Sbjct: 593 KDYQIEPSAEHYSCLVDMLGRAGRLEEAERLMSHIPGGPGLSVLQSLLGA 642
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 157/552 (28%), Positives = 259/552 (46%), Gaps = 96/552 (17%)
Query: 21 AYDFS--QNNTNIRIRPSTYAGLISACSSLRSLQ----LGRKVHDHILLSKCQPDVVLQN 74
A+ F+ N++ + TY ++S C R ++ +G ++H I+ +V + N
Sbjct: 146 AFSFACKMNSSGVVFDAVTYTTVLSFC--WRHVEAYFLIGLQLHSCIVKFGFDCEVFVGN 203
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN-DAIKLYIQMLQSGVM 133
+++MY + G L +AR F++M R++VSW AMI+G SQ +AI +++QM + G+
Sbjct: 204 ALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYGLEAISMFLQMFRGGME 263
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
+ +F S + AC ++ L RQ+H IK+ H H+ N LI+ Y K I DAR V
Sbjct: 264 LDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIEDARLV 323
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF------------ 241
F + ++V SW +MI+ E EA+ FNEM G Y PN+ F
Sbjct: 324 FQNMNERNVVSWTTMISI-----DEAEAVSFFNEMRLDGVY-PNDVTFVGLIHAITIGEL 377
Query: 242 ------------GSVFSACSN--------FARI--------LFNEIDSPDLASWNALIAG 273
+ FS+ SN +A+ +F E+ D+ +WNALI+G
Sbjct: 378 VVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNALISG 437
Query: 274 VASHSNANEAM-SLFSEMRDRELLPDGLTVHSLLCACIG---RLTLYQGMQVHSYIIKMG 329
+ EA+ + FS + + + P+ + S+L A IG ++L G + HS IIK+G
Sbjct: 438 FVHNGLCQEAIRAFFSGLIESK--PNQYSFGSILNA-IGAAEDVSLKYGQRCHSQIIKLG 494
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
+++ V +A+L MYAK +C + VF E + + +W +II+A +H E + F
Sbjct: 495 LNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQ-FAWTTIISAYARHGDYESVMNWF 553
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
M +++PD ITF ++ AC + G++D + C
Sbjct: 554 EEMRRLEVRPDSITFLSILTACGR--------------------------RGMVD--MGC 585
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
GS K ++ P +S L+ + G +EA +L M + P L L +L
Sbjct: 586 HLFGSMVK--DYQIEPSAEHYSCLVDMLGRAGRLEEAERL---MSHIPGGPGLSVLQSLL 640
Query: 510 TACSHVGLVEEG 521
AC G V+ G
Sbjct: 641 GACRVHGNVDMG 652
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 164/367 (44%), Gaps = 49/367 (13%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S ++ +Y ++ + + ++ +SAC ++L+L R++H +
Sbjct: 234 NAMISGYSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSI 293
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ + V + N +++ Y KC +EDAR+ F M +RNVVSWT MI+ E +A+
Sbjct: 294 KTRHEKHVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMIS-----IDEAEAVS 348
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ +M GV P TF +I A + V G+ +H K+ S N++I MY
Sbjct: 349 FFNEMRLDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSIITMYA 408
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
KF + D+ VF + +D+ +W ++I+ F G EA+ F L +PN++ FG
Sbjct: 409 KFKSMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIRAFFSGLIES--KPNQYSFG 466
Query: 243 SVFSAC---------------SNFARILFNE-------------------------IDSP 262
S+ +A S ++ N +++P
Sbjct: 467 SILNAIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFVETP 526
Query: 263 DLA--SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ +W +I+ A H + M+ F EMR E+ PD +T S+L AC R + G
Sbjct: 527 QQSQFAWTTIISAYARHGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDMGCH 586
Query: 321 VHSYIIK 327
+ ++K
Sbjct: 587 LFGSMVK 593
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 124/232 (53%), Gaps = 13/232 (5%)
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D TV + L AC G L G Q+H + I F + V N+++ MY K C AL +F
Sbjct: 65 DEFTVANALKACRGYPLL--GSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIF 122
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM--A 415
+ L + D VSWN++++ C +E+ F +M +S + D +T+ V+ C + A
Sbjct: 123 ENL-THPDIVSWNTVLSGC---QTSEDAFSFACKMNSSGVVFDAVTYTTVLSFCWRHVEA 178
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+ QLH I K G +VFV N L+ +Y + G L AR++F M+ D+VSW+++I
Sbjct: 179 YFLIGLQLHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMIS 238
Query: 476 GYAQFGC-GDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
GY+Q G G EA+ +F +M G+ + ++ ++AC + E+ L L R
Sbjct: 239 GYSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGY----EKNLELAR 286
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLR--SLQLGRKVH 58
N +S L EA+ A+ FS I +P+ Y+ +++A + SL+ G++ H
Sbjct: 432 NALISGFVHNGLCQEAIRAF-FS---GLIESKPNQYSFGSILNAIGAAEDVSLKYGQRCH 487
Query: 59 DHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
I+ D ++ + +L+MY K GS+ +++ F + PQ++ +WT +I+ +++
Sbjct: 488 SQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWTTIISAYARHGDYE 547
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK-------SEHGSHL 171
+ + +M + V P TF SI+ AC G V +G L ++K +EH S
Sbjct: 548 SVMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFGSMVKDYQIEPSAEHYS-- 605
Query: 172 IAQNALIAMYTKFDRILDARNVFSGI 197
L+ M + R+ +A + S I
Sbjct: 606 ----CLVDMLGRAGRLEEAERLMSHI 627
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 9/181 (4%)
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D T + + AC L +Q+H + V N LM++Y K G A +F
Sbjct: 65 DEFTVANALKACRGYPLLG--SQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIF 122
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC-SHV-GL 517
+ +PD+VSW++++ G ++A +M S GV + VT VL+ C HV
Sbjct: 123 ENLTHPDIVSWNTVLSGCQ---TSEDAFSFACKMNSSGVVFDAVTYTTVLSFCWRHVEAY 179
Query: 518 VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
GL L+ + ++G + ++ + +R G + EA +M D+V W +++
Sbjct: 180 FLIGLQLHSCIV-KFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKT-RDLVSWNAMI 237
Query: 578 A 578
+
Sbjct: 238 S 238
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 246/483 (50%), Gaps = 57/483 (11%)
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI---IKACSGLGSVCLGRQLH 159
SW I + Q AI L++QM ++ V P S+ +K+C+GLG L LH
Sbjct: 14 SWAYQIRMAASQGQFLHAISLFLQM-RASVAPRSSVPASLPAALKSCAGLGLCTLAASLH 72
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
A I+S + NAL+ + K G+
Sbjct: 73 ALAIRSGSFADRFTANALLNLCIKLP------------------------------GF-- 100
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSN 279
HH G + SA R +F+E+ D SWN LI G A H
Sbjct: 101 ----------HHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKR 150
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLL-----CACIGRLTLYQGMQVHSYIIKMGFDSNV 334
EA+S+ EM +PD T+ ++L CA I R GM VH Y IK GFD++V
Sbjct: 151 HQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKR-----GMVVHGYAIKNGFDNDV 205
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V ++++ MYA C+ + ++ VF + D+V WNS++A Q+ EE +F RML
Sbjct: 206 FVGSSLIDMYANCTQMDYSMKVFDSFS-DCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQ 264
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
+ ++P +TF+ ++ A ++ L + QLH Y+ + ++F+ + L+D+Y KCG++
Sbjct: 265 AGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDI 324
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
AR++FN +++PD+VSW+++I+GYA G EA LF RM V PN +T + VLTACSH
Sbjct: 325 ARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSH 384
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
GLV+ G + M N+YG +P+ EHC+ + D L RAG + EA +FI++M VW
Sbjct: 385 AGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWS 444
Query: 575 SLL 577
+LL
Sbjct: 445 TLL 447
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 143/284 (50%), Gaps = 17/284 (5%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
ST + + C+ ++ G VH + + + DV + + +++MY C ++ + FD
Sbjct: 174 STVLPIFAECADIKR---GMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDS 230
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ V W +M+AG +QN +A+ ++ +MLQ+GV P TF S+I A L + LG
Sbjct: 231 FSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLG 290
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+QLHA++I++ ++ ++LI MY K + AR VF+GI D+ SW +MI ++
Sbjct: 291 KQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALH 350
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS-----PDLA 265
G EA F E + G +PN F +V +ACS+ + FN + + P L
Sbjct: 351 GPTTEAFVLF-ERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLE 409
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
AL + + +EA + SEM+ + P +LL AC
Sbjct: 410 HCAALADTLGRAGDLDEAYNFISEMK---IKPTSSVWSTLLRAC 450
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 175/431 (40%), Gaps = 69/431 (16%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNM----------YGKCG 84
P++ + +C+ L L +H + S D N +LN+ +G G
Sbjct: 49 PASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNG 108
Query: 85 ----------SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
+ E R FD+M +R+ VSW +I GC+++ + +A+ + +M + G MP
Sbjct: 109 PSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMP 168
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
FT +++ + + G +H + IK+ + + ++LI MY ++ + VF
Sbjct: 169 DTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVF 228
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--- 251
+ D W SM+A +++ G EAL F ML G +P F S+ A N
Sbjct: 229 DSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGV-RPVPVTFSSLIPAFGNLSLL 287
Query: 252 -------------------------------------ARILFNEIDSPDLASWNALIAGV 274
AR +FN I SPD+ SW A+I G
Sbjct: 288 RLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGY 347
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSN 333
A H EA LF M + P+ +T ++L AC + G + +S + GF +
Sbjct: 348 ALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPS 407
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELF 386
+ C A+ + L A E+ S W++++ AC H A+++F
Sbjct: 408 LEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIF 467
Query: 387 RLFSRMLASQI 397
L + + S +
Sbjct: 468 ELEPKSMGSHV 478
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 85/159 (53%), Gaps = 16/159 (10%)
Query: 8 SLCKQNLYNEALVAYDFSQNNT--------------NIRIRPSTYAGLISACSSLRSLQL 53
S C L+N L Y +QN + +R P T++ LI A +L L+L
Sbjct: 232 SDCDAVLWNSMLAGY--AQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRL 289
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ 113
G+++H +++ ++ ++ + + +++MY KCG+++ AR F+ + ++VSWTAMI G +
Sbjct: 290 GKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYAL 349
Query: 114 NYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
+ +A L+ +M V P TF +++ ACS G V
Sbjct: 350 HGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLV 388
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 97/238 (40%), Gaps = 34/238 (14%)
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI--TFNDVMGACAKMASLEMVTQLHC 425
SW I Q LF +M AS + + + +CA + + LH
Sbjct: 14 SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73
Query: 426 YITKTGLAFDVFVMNGLMDIYIKC---------------GSLGSA-----RKLFNFMENP 465
++G D F N L+++ IK G L SA RK+F+ M
Sbjct: 74 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 133
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL---TACSHV--GLVEE 520
D VSW++LILG A+ EAL + M G P+ TL VL C+ + G+V
Sbjct: 134 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 193
Query: 521 GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G + +N+ + S ++D+ A + + + + D D V+W S+LA
Sbjct: 194 GYAIKNGFDNDVFV------GSSLIDMYANCTQMDYSMKVFDSFS-DCDAVLWNSMLA 244
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 166/548 (30%), Positives = 261/548 (47%), Gaps = 126/548 (22%)
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
+P F ++ +C S R +HA ++ ++ + QN LI +Y K D + DAR
Sbjct: 12 LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEAL-----------CHFNEM------------- 228
+F + +++ +W S+I+ +K G+ EA C +N M
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 229 ------LHHGAYQPNEFIFGSVFSACSNF------------------------------- 251
+H + NE+ FGS SAC+
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191
Query: 252 ---------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
A +F+ + +L +WN+LI + A+EA+ +F M D L PD +T+
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
S++ AC L +G+Q+H+ ++K F ++ + NA++ MYAKCS + A VF +
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMS 311
Query: 362 ------------------------------KNADSVSWNSIIAACLQHNQAEELFRLFSR 391
+ VSWN++IA Q+ + EE RLF
Sbjct: 312 IRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRL 371
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
+ I P H TF +++ + D+FV N L+D+Y+KCGS
Sbjct: 372 LKRESIWPTHYTFGNLLKS------------------------DIFVGNSLIDMYMKCGS 407
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+ ++F M+ D VSW+++I+GYAQ G G EAL++F +M G P+ VT++GVL A
Sbjct: 408 IEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCA 467
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
CSH GLVEEG H + ME E+G+IP ++H +C+VDLL RAGC++EA++ I M + D V
Sbjct: 468 CSHAGLVEEGRHYFFSME-EHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAV 526
Query: 572 VWKSLLAS 579
VW SLLA+
Sbjct: 527 VWGSLLAA 534
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 151/598 (25%), Positives = 269/598 (44%), Gaps = 109/598 (18%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS + + + E+L Y + + + ++ +SAC+ L L +G +VH +
Sbjct: 116 NSMVSGFAQHDRFEESL-EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVS 174
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S+ DV + + +++MY KCGS+ A F M +RN+V+W ++I QN ++A++
Sbjct: 175 KSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALE 234
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS-EHGSHLIAQNALIAMY 181
++++M+ SG+ P + T S++ AC+ L ++ G Q+HA V+K+ + L+ NAL+ MY
Sbjct: 235 VFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMY 294
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K ++ +AR VF ++ ++V S SM++ +++
Sbjct: 295 AKCSKVNEARRVFDRMSIRNVVSETSMVSGYAR--------------------------- 327
Query: 242 GSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
+A AR +F+++ ++ SWNALIAG + EA+ LF ++ + P T
Sbjct: 328 ----AASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYT 383
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
+LL S++ V N+++ MY KC + + VF+++
Sbjct: 384 FGNLL------------------------KSDIFVGNSLIDMYMKCGSIEDGSRVFEKM- 418
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
K D VSWN+II Q+ E ++F +ML KPDH+T V+ AC+ +E
Sbjct: 419 KERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGR 478
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILG---- 476
+ + GL ++D+ + G L A+ L M NPD V W SL+
Sbjct: 479 HYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVH 538
Query: 477 ------------------------------YAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
YA+ G + +++ MR GV+
Sbjct: 539 GNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQ----- 593
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLA----RAGCVHEAEDF 560
CS + VE +H++ + + + P R+ V+ +L R G + +A DF
Sbjct: 594 ---PGCSWIE-VESRVHVFLVKDKSH---PHRKQIYSVLKMLTEQMKRVGYIPDANDF 644
>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
Length = 809
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 174/596 (29%), Positives = 291/596 (48%), Gaps = 57/596 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPD-------VVLQNHILNMYGKCGSLEDA 89
+YA L+ C L L G+++H I S D L N ++ MYGKCG ++A
Sbjct: 16 SYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEA 75
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
+ FD + +N+ SWT+++ A++ + QM+++GV P + F + + C L
Sbjct: 76 QRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGIL 135
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
+ G +H + S L NAL++MY K R+ A+ +F + K+V SW ++
Sbjct: 136 KRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILV 195
Query: 210 AAFSKLGYELEA------------------------LCHFNEMLHHGAYQPNEFIFGS-- 243
+ F++ G E +C +L ++ +++I GS
Sbjct: 196 SVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGSGL 255
Query: 244 ------------VFSACSNF--ARILFNEI---DSPDLASWNALIAGVASHSNANEAMSL 286
+F+ C AR +F ++ + + WNA+I A + EA+ L
Sbjct: 256 DREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFL 315
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
++ + + P+ +T S L AC +L G +H I + GFD V V NA++TMY +
Sbjct: 316 LDSLQLQGVKPNCITFISSLGACS---SLQDGRALHLLIDESGFDREVSVANALVTMYGR 372
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ-IKPDHITFN 405
C L ++ +F E+ + D SWNS IAA H +++E +L +M ++P +T
Sbjct: 373 CGSLLDSAKLFSEMAEK-DLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVTLV 431
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
M AC +A ++H + GL + V NGL+D+Y K G + +AR +F+
Sbjct: 432 TAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRR 491
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
+V +W+++ Y Q G L L M+ G P+ VT V +L+ C H GL+EE + +
Sbjct: 492 NVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNF 551
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD--ADIVVWKSLLAS 579
M E+GI P+ +H SCV+DLLARAG + +AEDFI +++ A +W +LL +
Sbjct: 552 VAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMALLGA 607
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 137/502 (27%), Positives = 233/502 (46%), Gaps = 63/502 (12%)
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS--------EHGSHLIAQNALIAM 180
+SGV ++ ++K C LG + G++LHA + +S E G+ + N L+ M
Sbjct: 7 RSGVDDACRSYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLG-NCLVQM 65
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K R +A+ F IA K++ SW S++ A+ G +AL F++M+ G +P+ +
Sbjct: 66 YGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGV-EPDRLV 124
Query: 241 FGSVFSACS----------------------------------------NFARILFNEID 260
F + + C + A+ LF+ ++
Sbjct: 125 FLAALNVCGILKRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLE 184
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GM 319
++ SW L++ A + E L M + PD + + +LL C R L +
Sbjct: 185 MKNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSW 244
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV--SWNSIIAACL 377
H YI+ G D V A+L+M+A+C + A +F+++ ++ V WN++I A
Sbjct: 245 MAHDYIVGSGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYA 304
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
++E L + +KP+ ITF +GAC +SL+ LH I ++G +V
Sbjct: 305 HRGCSKEALFLLDSLQLQGVKPNCITFISSLGAC---SSLQDGRALHLLIDESGFDREVS 361
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL- 496
V N L+ +Y +CGSL + KLF+ M D+ SW+S I +A G DE +KL +MR
Sbjct: 362 VANALVTMYGRCGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEG 421
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC--SCVVDLLARAGCV 554
G+ P+ VTLV ++AC G + + R+ E + E C + +VD+ +AG V
Sbjct: 422 GLEPSSVTLVTAMSAC---GGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDV 478
Query: 555 HEAEDFINQMACDADIVVWKSL 576
A +I A ++ W ++
Sbjct: 479 DTAR-YIFDRALRRNVTTWNAM 499
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/482 (30%), Positives = 256/482 (53%), Gaps = 43/482 (8%)
Query: 140 GSIIKACSGLGSVCLGRQLHAHVIKS-EHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
G +++AC + +GR+LH V S + + + +I MY+ D+R VF +
Sbjct: 109 GVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLR 168
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------- 251
RK++ W ++++A+++ +A+ F+E++ ++P+ F V AC+
Sbjct: 169 RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQ 228
Query: 252 ----------------------------------ARILFNEIDSPDLASWNALIAGVASH 277
+ +F+ +D+ ++SWNAL+ G A +
Sbjct: 229 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQN 288
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
S+ +A+ L+ +M D L PD T+ SLL AC +L+ G ++H + ++ G + +
Sbjct: 289 SDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIG 348
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
++L++Y C A ++F + ++ VSWN +IA Q+ +E LF +ML+ I
Sbjct: 349 ISLLSLYICCGKPFAAQVLFDGM-EHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGI 407
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
+P I V GAC+++++L + +LHC+ K L D+FV + ++D+Y K G +G +++
Sbjct: 408 QPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQR 467
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
+F+ + DV SW+ +I GY G G EAL+LF +M LG+ P+ T G+L ACSH GL
Sbjct: 468 IFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGL 527
Query: 518 VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
VE+GL + M N + I P EH +CVVD+L RAG + +A I +M D D +W SLL
Sbjct: 528 VEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLL 587
Query: 578 AS 579
+S
Sbjct: 588 SS 589
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/531 (26%), Positives = 247/531 (46%), Gaps = 79/531 (14%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRI-----RPSTYAGLISACSSLRSLQLGRKVHDH 60
+ LC+ EAL DF Q ++ + R L+ AC + +++GR++H+
Sbjct: 74 IKKLCESGNLKEAL---DFLQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEM 130
Query: 61 ILLSK--CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
+ S C D VL I+ MY CGS D+RM FDK+ ++N+ W A+++ ++N
Sbjct: 131 VSASTQFCN-DFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFE 189
Query: 119 DAIKLYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
DA+ ++ +++ + P FT +IKAC+GL + LG+ +H K + S + NAL
Sbjct: 190 DAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNAL 249
Query: 178 IAMYTKFDRILDA-RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
IAMY K + +A + VF + K V+SW +++ +++ +AL + +M G P
Sbjct: 250 IAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSG-LDP 308
Query: 237 NEFIFGSVFSACSNF----------------------------------------ARILF 256
+ F GS+ ACS A++LF
Sbjct: 309 DWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLF 368
Query: 257 NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
+ ++ L SWN +IAG + + +EA++LF +M + P + + + AC L
Sbjct: 369 DGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALR 428
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
G ++H + +K ++ V ++I+ MYAK + + +F L + D SWN IIA
Sbjct: 429 LGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRL-REKDVASWNVIIAGY 487
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
H + +E LF +ML +KPD TF ++ AC+ H + + GL +
Sbjct: 488 GIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACS-----------HAGLVEDGLEYFN 536
Query: 437 FVMN------------GLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++N ++D+ + G + A +L M +PD WSSL+
Sbjct: 537 QMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLL 587
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 193/419 (46%), Gaps = 43/419 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS+ + L+ +A+ + + T + T +I AC+ L L LG+ +H
Sbjct: 176 NAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMAT 235
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDA-RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
DV + N ++ MYGKCG +E+A + FD M + V SW A++ G +QN A+
Sbjct: 236 KMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKAL 295
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
LY+QM SG+ P FT GS++ ACS + S+ G ++H +++ +L+++Y
Sbjct: 296 DLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLY 355
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
+ A+ +F G+ + + SW MIA +S+ G EA+ F +ML G QP E
Sbjct: 356 ICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDG-IQPYEIAI 414
Query: 242 GSVFSACSNFARI----------------------------------------LFNEIDS 261
V ACS + + +F+ +
Sbjct: 415 MCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLRE 474
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
D+ASWN +IAG H EA+ LF +M L PD T +L AC + G++
Sbjct: 475 KDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEY 534
Query: 322 HSYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+ ++ + + + ++ M + + +AL + +E+ + DS W+S++++C H
Sbjct: 535 FNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIH 593
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 160/332 (48%), Gaps = 16/332 (4%)
Query: 9 LCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKC 66
LC ++ A D T+ + P T L+ ACS ++SL G ++H L +
Sbjct: 282 LCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGL 341
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
D + +L++Y CG A++ FD M R++VSW MIAG SQN ++AI L+ Q
Sbjct: 342 AVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQ 401
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
ML G+ P + + ACS L ++ LG++LH +K+ + +++I MY K
Sbjct: 402 MLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGC 461
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
I ++ +F + KDV SW +IA + G EAL F +ML G +P++F F +
Sbjct: 462 IGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLG-LKPDDFTFTGILM 520
Query: 247 ACSNFARI-----LFNEI-----DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
ACS+ + FN++ P L + ++ + ++A+ L EM
Sbjct: 521 ACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGD--- 577
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
PD SLL +C L G +V + ++++
Sbjct: 578 PDSRIWSSLLSSCRIHGNLGLGEKVANKLLEL 609
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/475 (30%), Positives = 246/475 (51%), Gaps = 53/475 (11%)
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
R +H H++K+ L L+ +Y+K + A VF + R++V +W +++ + +
Sbjct: 83 ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 142
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE---------------- 258
+ L AL F +ML GAY P+ + G V +ACS+ I F +
Sbjct: 143 NSHPLLALQLFIKMLEAGAY-PSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTS 201
Query: 259 ------------------------IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
I D+ SW ++I+ + A ++S F +M
Sbjct: 202 IGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDG 261
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ P+ T+ S+L AC LTL G Q+HS IK+G+ S++ + N+I+ +Y KC L A
Sbjct: 262 MKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQ 321
Query: 355 LVFKELGKNADSVSWNSIIAACLQ-----------HNQAEELFRLFSRMLASQIKPDHIT 403
+F+ + + + V+WN++IA + H +F ++ S +KPD T
Sbjct: 322 KLFEGM-ETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFT 380
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
F+ V+ C+ + +LE Q+H I K+G+ DV V L+ +Y KCGS+ A K F M
Sbjct: 381 FSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMP 440
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
+ ++SW+S+I G+A+ G +AL+LF MR +G+ PN VT VGVL+ACSH GL +E L+
Sbjct: 441 SRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALY 500
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +M+ +Y I P +H +C++D+ R G V EA D +++M + + +W L+A
Sbjct: 501 YFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIA 555
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 163/566 (28%), Positives = 265/566 (46%), Gaps = 64/566 (11%)
Query: 23 DFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGK 82
D + RI S Y L+ C R +H HI+ + D+ + ++N+Y K
Sbjct: 52 DAEEPKLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSK 111
Query: 83 CGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI 142
CG +E A FD +P+RNV +WT ++ G QN A++L+I+ML++G P +T G +
Sbjct: 112 CGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIV 171
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
+ ACS L S+ G+Q+HA++IK N+L + Y+KF R+ A F I KDV
Sbjct: 172 LNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDV 231
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------- 251
SW S+I++ G +L F +ML G +PNE+ SV SAC
Sbjct: 232 ISWTSVISSCCDNGQAARSLSFFMDMLSDGM-KPNEYTLTSVLSACCVMLTLDLGAQIHS 290
Query: 252 -----------------------------ARILFNEIDSPDLASWNALIAG--------- 273
A+ LF +++ +L +WNA+IAG
Sbjct: 291 LSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAE 350
Query: 274 --VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
VA+H + + A+++F ++ + PD T S+L C + L QG Q+H IIK G
Sbjct: 351 DDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVL 410
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
++V V A+++MY KC + A F E+ +SW S+I +H +++ +LF
Sbjct: 411 ADVVVGTALVSMYNKCGSIDKASKAFLEMPSRT-MISWTSMITGFARHGLSQQALQLFED 469
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF-VMNG---LMDIYI 447
M IKP+ +TF V+ AC+ + + Y +++ VM+ L+D+Y+
Sbjct: 470 MRLVGIKPNQVTFVGVLSACSHAG---LADEALYYFELMQKQYNIKPVMDHFACLIDMYL 526
Query: 448 KCGSLGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV-TL 505
+ G + A + + M P+ WS LI G G D L + + L + P V T
Sbjct: 527 RLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSD--LGFYAAEQLLKLKPKDVETY 584
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENE 531
V +L G ++ + ++M+ E
Sbjct: 585 VSLLNMHISAGRWKDVSKVRKLMKEE 610
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 136/274 (49%), Gaps = 3/274 (1%)
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
LL CI R + +H +I+K GF ++ V ++ +Y+KC V+ +A VF L +
Sbjct: 70 LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRR- 128
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
+ +W +++ +Q++ +LF +ML + P + T V+ AC+ + S+E Q+H
Sbjct: 129 NVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVH 188
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
Y+ K + FD + N L Y K L A K F ++ DV+SW+S+I G
Sbjct: 189 AYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAA 248
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV 544
+L F M S G+ PN TL VL+AC + ++ G ++ + + G + + +
Sbjct: 249 RSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHS-LSIKLGYGSSILIKNSI 307
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ L + G + EA+ M ++V W +++A
Sbjct: 308 MYLYLKCGWLIEAQKLFEGMET-LNLVTWNAMIA 340
>gi|357114780|ref|XP_003559172.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 846
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 171/582 (29%), Positives = 279/582 (47%), Gaps = 59/582 (10%)
Query: 53 LGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCS 112
LG+ H H+L + +P + L+N++L +Y +CG + AR+ FD MP+R+ V+W +IAG S
Sbjct: 70 LGKLTHSHMLRAGYRPGLFLRNNLLAVYCRCGDMRHARLLFDGMPRRDAVTWNTLIAGYS 129
Query: 113 QNYQEND----------AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
+ A+ + + GV +FT+ +++ AC G G GR H V
Sbjct: 130 SSSGGGGSTGGGATTRLALAAFRDARRDGVAVDRFTYAAVLAACGGAGDGRHGRAAHGMV 189
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL 222
+ S N++I MY K I + R VF +D SW +++A+ ++G+ E
Sbjct: 190 VASGLAETAFLTNSVIDMYAKCGMIDEVRLVFDRAEERDEASWNLLLSAYVRMGWP-EVA 248
Query: 223 CHFNEMLHHGAYQPNEFIFGSVFSACS------NFARIL--------------------- 255
H +H + + F G + ACS + R+L
Sbjct: 249 VHVLVWMHRSGVKLDSFALGGILKACSELEGSEDVRRMLHGCVVKVGLDLDMFVGSAMVD 308
Query: 256 --------------FNEIDSPDLASWNALIAGVASHSNAN------EAMSLFSEMRDREL 295
F+ I + ++ ++A+IAG A N EA+ LFS + +
Sbjct: 309 MYAKNGGLEEAIKVFDCIPNQNVVVYSAMIAGFARLGNDPCPEIRIEAIRLFSNLLRMRI 368
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P T S+L C L+ G Q+H+++I GF + + N ++ +Y+K + ++L
Sbjct: 369 KPSRFTFKSVLEVCNLTNALHCGRQIHAHVIFNGFQEDEFIANVLINLYSKARSVNDSLR 428
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
F K D +W S+I A + E+ LF +L +PD T ++VM ACA ++
Sbjct: 429 CFHMTPKQ-DVFTWTSMITAFADNENFEKSLDLFIELLNVGNEPDQFTLSNVMNACAALS 487
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
Q+HCY K+GL N + +Y G L +++K F + D +SWS+++L
Sbjct: 488 IPVTCKQIHCYTVKSGLDQFTVCGNSQIAMYRSMGDLKASKKTFEQITCLDTLSWSTMVL 547
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
YA G +EAL L +M+ V N + + VL ACS +GL +EG Y M++E+G
Sbjct: 548 SYAVHGHENEALLLLQKMKDCRVGINDIAFLAVLIACSQLGLADEGFRHYDSMKSEHGCA 607
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
P +H + VVDLL R G + EAEDFI + + D ++W +LL
Sbjct: 608 PNSKHKASVVDLLCRVGKIAEAEDFILRSGSENDPILWHALL 649
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 194/421 (46%), Gaps = 51/421 (12%)
Query: 27 NNTNIRIRPSTYAGLISACSSLR-SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS 85
+ + +++ G++ ACS L S + R +H ++ D+ + + +++MY K G
Sbjct: 256 HRSGVKLDSFALGGILKACSELEGSEDVRRMLHGCVVKVGLDLDMFVGSAMVDMYAKNGG 315
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN------DAIKLYIQMLQSGVMPGQFTF 139
LE+A FD +P +NVV ++AMIAG ++ + +AI+L+ +L+ + P +FTF
Sbjct: 316 LEEAIKVFDCIPNQNVVVYSAMIAGFARLGNDPCPEIRIEAIRLFSNLLRMRIKPSRFTF 375
Query: 140 GSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR 199
S+++ C+ ++ GRQ+HAHVI + N LI +Y+K + D+ F +
Sbjct: 376 KSVLEVCNLTNALHCGRQIHAHVIFNGFQEDEFIANVLINLYSKARSVNDSLRCFHMTPK 435
Query: 200 KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------- 252
+DV +W SMI AF+ ++L F E+L+ G +P++F +V +AC+ +
Sbjct: 436 QDVFTWTSMITAFADNENFEKSLDLFIELLNVGN-EPDQFTLSNVMNACAALSIPVTCKQ 494
Query: 253 ---------------------------------RILFNEIDSPDLASWNALIAGVASHSN 279
+ F +I D SW+ ++ A H +
Sbjct: 495 IHCYTVKSGLDQFTVCGNSQIAMYRSMGDLKASKKTFEQITCLDTLSWSTMVLSYAVHGH 554
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH-SYIIKMGFDSNVPVCN 338
NEA+ L +M+D + + + ++L AC +G + + S + G N
Sbjct: 555 ENEALLLLQKMKDCRVGINDIAFLAVLIACSQLGLADEGFRHYDSMKSEHGCAPNSKHKA 614
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
+++ + + + A G D + W++++ AC H E + +++ +++
Sbjct: 615 SVVDLLCRVGKIAEAEDFILRSGSENDPILWHALLRACRIHGDKERGIKTGEKLM--ELE 672
Query: 399 P 399
P
Sbjct: 673 P 673
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 184/587 (31%), Positives = 290/587 (49%), Gaps = 88/587 (14%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
+++ N ++ Y K L+ AR FD+MPQR VVSW MI+ S++ + ++A+ L M
Sbjct: 31 EIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMH 90
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK----- 183
+S + + TF S++ C+ L + G+ +H V+KS S + +AL+ Y
Sbjct: 91 RSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIG 150
Query: 184 -----FDRIL---------------------DARNVFSGIARKDVTSWGSMIAAFSKLGY 217
FD ++ DA +VF + R+DV +W ++I+ FSK G
Sbjct: 151 EARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGD 210
Query: 218 EL-EALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+AL F M+ G PNEF F V AC
Sbjct: 211 GCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIG 270
Query: 252 -ARILF----NEID----------SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A + F ID +P L + N+LI G+ S +A +F+ M + +
Sbjct: 271 GALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPV 330
Query: 297 PDGLTVHSLLCACIGRL----TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
L + A G++ L++ M + F SN ++++Y++ +
Sbjct: 331 SYNLMIKGY--AVGGQMDDSKRLFEKMPCRTI-----FSSN-----TMISVYSRNGEIDK 378
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
AL +F+E D V+WNS+I+ + Q EE +L+ M I+ TF+ + AC+
Sbjct: 379 ALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACS 438
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+ SL LH ++ KT +V+V L+D+Y KCGS+ A+ F + +P+V +W++
Sbjct: 439 CLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTA 498
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
LI G+A G G EA+ LF RM G++PN T VGVL+ACS GLV EG+ ++ ME Y
Sbjct: 499 LINGHAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCY 558
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ PT EH +CVVDLL R+G + EAE+FI +M +AD VVW +LL++
Sbjct: 559 SVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSA 605
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 126/480 (26%), Positives = 222/480 (46%), Gaps = 75/480 (15%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +SS K ++EAL +S + +++++ ST++ ++S C+ LR L+ G+ +H +L
Sbjct: 67 NTMISSYSKHGRFSEALFLV-YSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVL 125
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFD---------------------------- 94
S + ++ + +L Y C + +AR FD
Sbjct: 126 KSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALS 185
Query: 95 ---KMPQRNVVSWTAMIAGCSQNYQE-NDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGL 149
KMP+R+VV+WT +I+G S+N A++++ M++SG P +FTF +++AC L
Sbjct: 186 VFVKMPRRDVVAWTTLISGFSKNGDGCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRL 245
Query: 150 GSVCLGRQLHAHVIK------SEHGSHLI-------------------------AQNALI 178
G + +GR +H ++K G L+ A N+LI
Sbjct: 246 GILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLI 305
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
RI DA VF+G+ + S+ MI ++ G ++ F +M + N
Sbjct: 306 EGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNT 365
Query: 239 FIFGSVFSACSNFARI--LFNEI-DSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
I SV+S + LF E + D +WN++I+G EA+ L+ M +
Sbjct: 366 MI--SVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSI 423
Query: 296 LPDGLTVHSLL--CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
T +L C+C+G +L+QG +H+++IK F+SNV V +++ MY+KC + A
Sbjct: 424 QQTQSTFSALFHACSCLG--SLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEA 481
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
F + + + +W ++I H E LF RM+ + P+ TF V+ AC++
Sbjct: 482 QTSFVSIF-SPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLSACSR 540
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 144/287 (50%), Gaps = 17/287 (5%)
Query: 48 LRSLQLGRKVHDHILLSKCQP--DVVLQNHILNMYGKCGSLEDARMGFDKMP-QRNVVSW 104
++ +G ++ D L + P + N ++++Y + G ++ A F++ +++ V+W
Sbjct: 336 IKGYAVGGQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTW 395
Query: 105 TAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK 164
+MI+G + Q +A+KLYI M + + Q TF ++ ACS LGS+ G+ LHAH+IK
Sbjct: 396 NSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIK 455
Query: 165 SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCH 224
+ S++ +LI MY+K I++A+ F I +V +W ++I + G EA+
Sbjct: 456 TPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISL 515
Query: 225 FNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFNEID-----SPDLASWNALIAGV 274
F+ M+ G PN F V SACS N +F+ ++ +P L + ++ +
Sbjct: 516 FDRMIEQG-LAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLL 574
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
+ EA +M L DG+ +LL AC + L G +V
Sbjct: 575 GRSGHIREAEEFIKKM---PLEADGVVWGALLSACWFWMDLEVGERV 618
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 188/417 (45%), Gaps = 53/417 (12%)
Query: 169 SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
S +I+ N I+ Y K ++ AR +F + ++ V SW +MI+++SK G EAL M
Sbjct: 30 SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSM 89
Query: 229 LHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
H + +E F SV S C A L G H + L S
Sbjct: 90 -HRSHMKLSESTFSSVLSVC----------------ARLRCLRDGKLIH-----CLVLKS 127
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
EL+ L C IG + +V +++ N + + +L Y C+
Sbjct: 128 GSESFELVGSALLYFYASCFEIG-----EARRVFDVLVR----RNEVLWSLMLVGYVTCN 178
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQH----NQAEELFRLFSRMLASQIKPDHITF 404
V+ +AL VF ++ + D V+W ++I+ ++ +A E+FRL R + + P+ TF
Sbjct: 179 VMDDALSVFVKMPRR-DVVAWTTLISGFSKNGDGCGKALEIFRLMMR--SGETTPNEFTF 235
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
+ V+ AC ++ L + +H + K GL +D + L++ Y +C ++ A ++ + N
Sbjct: 236 DCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVN 295
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNLVTLVGVLTACSHVGLVEEGLH 523
P + + +SLI G G ++A +F M + VS NL ++ + G +++
Sbjct: 296 PCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNL-----MIKGYAVGGQMDDSKR 350
Query: 524 LYRIMENEYGIIPTRE--HCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
L+ M P R + ++ + +R G + +A + + + D V W S+++
Sbjct: 351 LFEKM-------PCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMIS 400
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/464 (22%), Positives = 176/464 (37%), Gaps = 119/464 (25%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKC--QPDVVLQNHILNMYGKC----------- 83
T+ ++ AC L L +GR VH LL KC + D + ++ Y +C
Sbjct: 234 TFDCVVRACGRLGILSVGRTVHG--LLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCK 291
Query: 84 --------------------GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
G +EDA + F+ M + N VS+ MI G + Q +D+ +L
Sbjct: 292 GVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRL 351
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ +M P + F S N +I++Y++
Sbjct: 352 FEKM------PCRTIFSS---------------------------------NTMISVYSR 372
Query: 184 FDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
I A +F KD +W SMI+ + G EAL + M H + Q + F
Sbjct: 373 NGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITM-HRLSIQQTQSTFS 431
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
++F ACS A+ F I SP
Sbjct: 432 ALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSP 491
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV- 321
++A+W ALI G A H +EA+SLF M ++ L P+G T +L AC + +GM++
Sbjct: 492 NVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIF 551
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
HS + ++ + + + A K++ AD V W ++++AC
Sbjct: 552 HSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMD 611
Query: 382 AEELFRLFSRMLASQIKP--DHITFNDVMGACAKMASLEMVTQL 423
E R+ +M + KP ++ +++ + MV ++
Sbjct: 612 LEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKMMVRKI 655
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S EAL Y + + +I+ ST++ L ACS L SL G+ +H H++
Sbjct: 396 NSMISGYIHSGQPEEALKLY-ITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLI 454
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + +V + +++MY KCGS+ +A+ F + NV +WTA+I G + + ++AI
Sbjct: 455 KTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAIS 514
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
L+ +M++ G+ P TF ++ ACS G V G ++
Sbjct: 515 LFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKI 550
>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
Length = 778
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 172/551 (31%), Positives = 267/551 (48%), Gaps = 44/551 (7%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
DV N ++ Y CG DAR FD+MP R+VVSW ++++ N DA + + M+
Sbjct: 153 DVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMM 212
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
+SGV + SI+ AC G +H V+K S + NAL+ MY KF +
Sbjct: 213 RSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLE 272
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA- 247
+ +VF+G+ K+ SW S I F+ G+ + L F M H P S+ A
Sbjct: 273 SSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDV-TPGSVTLSSLLPAL 331
Query: 248 ---------------------------------------CSNFARILFNEIDSPDLASWN 268
CS A +F I+ ++ SWN
Sbjct: 332 VDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWN 391
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
A+IA + + EA L EM+ P+ T+ +LL AC ++ G Q+H++ I+
Sbjct: 392 AMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRR 451
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
S++ V NA++ +YAKC L A +F K D VS+N++I Q E L
Sbjct: 452 SLMSDLFVSNALIDVYAKCGQLNLARYIFDRSEK--DGVSYNTLIVGYSQSQCCFESLHL 509
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
F +M + I+ D ++F + AC+ +++ + ++H + K L F+ N L+D+Y K
Sbjct: 510 FQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTK 569
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
G L +A K+FN + DV SW+++ILGY G D A +LF M+ G+ + V+ + V
Sbjct: 570 GGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAV 629
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
L+ CSH GLV+ G + M + I P + H +C+VDLL RAG + E+ + I M A
Sbjct: 630 LSVCSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRA 688
Query: 569 DIVVWKSLLAS 579
+ VW +LL S
Sbjct: 689 NSDVWGALLGS 699
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 136/526 (25%), Positives = 245/526 (46%), Gaps = 55/526 (10%)
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTF---GSIIKACSGLGSVCLG 155
R+ W ++ + +A+++Y +M++SGV P TF A + G
Sbjct: 78 RSAFLWNSLSRALASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKG 137
Query: 156 RQLHAHVIKSEHG---SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
+LHA ++ G + + A N L+ Y R DAR VF + +DV SW S+++A
Sbjct: 138 AELHAAALR--RGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSAL 195
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS----------------------- 249
G +A M+ G N S+ AC
Sbjct: 196 LTNGMLEDAKRAVVGMMRSGV-PVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSV 254
Query: 250 -NFARIL----------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
N L FN + + SWN+ I A + + +F M +
Sbjct: 255 VNLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSE 314
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
++ P +T+ SLL A + + G ++H Y I+ +S++ + N ++ MYAK
Sbjct: 315 HDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEK 374
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A +F+ + + + VSWN++IA Q+ E FRL M + P+ T +++ AC+
Sbjct: 375 ASAIFENI-EVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACS 433
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
++AS++M Q+H + + L D+FV N L+D+Y KCG L AR +F+ E D VS+++
Sbjct: 434 RVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSEK-DGVSYNT 492
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
LI+GY+Q C E+L LF +MR G+ + V+ +G L+ACS++ ++G ++ ++
Sbjct: 493 LIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKR- 551
Query: 533 GIIPTREH-CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
++ + + ++D+ + G + A N++ D+ W +++
Sbjct: 552 -LLDSHPFLANSLLDVYTKGGMLDTASKIFNRI-TQKDVASWNTMI 595
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 221/515 (42%), Gaps = 49/515 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS+L + +A A + + + ++ ++ AC + R G VH +L
Sbjct: 189 NSLVSALLTNGMLEDAKRAV-VGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVL 247
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
V L N +++MYGK G LE + F+ M ++N VSW + I + D ++
Sbjct: 248 KFGLNSVVNLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLE 307
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ M + V PG T S++ A LG LG++LH + I+ S + N L+ MY
Sbjct: 308 MFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYA 367
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
KF A +F I ++V SW +MIA ++ G E EA EM +G PN F
Sbjct: 368 KFGCSEKASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGEC-PNSFTLV 426
Query: 243 SVFSACS----------------------------------------NFARILFNEIDSP 262
++ ACS N AR +F+ +
Sbjct: 427 NLLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSEK- 485
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D S+N LI G + E++ LF +MR + D ++ L AC QG ++H
Sbjct: 486 DGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIH 545
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
++K DS+ + N++L +Y K +L A +F + + D SWN++I H Q
Sbjct: 546 GVLVKRLLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQK-DVASWNTMILGYGMHGQI 604
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
+ F LF M I+ DH+++ V+ C+ ++ + + + +
Sbjct: 605 DVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQNIKPQQMHYACM 664
Query: 443 MDIYIKCGSLGSARKLFN---FMENPDVVSWSSLI 474
+D+ + G L + ++ F N DV W +L+
Sbjct: 665 VDLLGRAGQLSESAEIIRNMPFRANSDV--WGALL 697
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 185/405 (45%), Gaps = 44/405 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T + L+ A L LG+++H + + + D+ + N +++MY K G E A F+ +
Sbjct: 323 TLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENI 382
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
RNVVSW AMIA +QN E +A +L I+M ++G P FT +++ ACS + SV +G+
Sbjct: 383 EVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGK 442
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+HA I+ S L NALI +Y K ++ AR +F + KD S+ ++I +S+
Sbjct: 443 QIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDR-SEKDGVSYNTLIVGYSQSQ 501
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
E+L F +M G + + F SACSN
Sbjct: 502 CCFESLHLFQQMRLAG-IEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLA 560
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A +FN I D+ASWN +I G H + A LF M+D +
Sbjct: 561 NSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIE 620
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
D ++ ++L C + +G + S +I ++ + + L + +
Sbjct: 621 YDHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESAEI 680
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+ + A+S W +++ +C H EL RL + L ++KP++
Sbjct: 681 IRNMPFRANSDVWGALLGSCRIHGDI-ELARLAAEHLF-ELKPEN 723
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 154/322 (47%), Gaps = 17/322 (5%)
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY---QGMQVHS 323
WN+L +AS + EA+ +++ M + PD T L A +G ++H+
Sbjct: 83 WNSLSRALASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHA 142
Query: 324 YIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
++ G ++V N ++T YA C +A VF E+ D VSWNS+++A L +
Sbjct: 143 AALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPAR-DVVSWNSLVSALLTNGML 201
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
E+ R M+ S + + + ++ AC +H + K GL V + N L
Sbjct: 202 EDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNAL 261
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y K G L S+ +FN M+ + VSW+S I +A G ++ L++F M V+P
Sbjct: 262 VDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGS 321
Query: 503 VTLVGVLTACSHVGLVEEG--LHLY---RIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
VTL +L A +G G LH Y R +E++ I T ++D+ A+ GC +A
Sbjct: 322 VTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANT------LMDMYAKFGCSEKA 375
Query: 558 EDFINQMACDADIVVWKSLLAS 579
+ ++V W +++A+
Sbjct: 376 SAIFENIEVR-NVVSWNAMIAN 396
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 126/283 (44%), Gaps = 19/283 (6%)
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG- 361
H L C G L L + + ++ ++ P+ A+L YA + +A L+ +
Sbjct: 18 HVLRLHCGGSLLLRRAHA--ASLVSGALTASFPLAGALLLSYAALPDIPSAHLILRHHPF 75
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
+ + WNS+ A E R+++RM+ S ++PD TF + A A +A E
Sbjct: 76 RLRSAFLWNSLSRALASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPA 135
Query: 422 ---QLHCYITKTGLAF-DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
+LH + GL DVF N L+ Y CG AR++F+ M DVVSW+SL+
Sbjct: 136 KGAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSAL 195
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH-----VGLVEEGLHLYRIMENEY 532
G ++A + M GV N+ +LV +L AC GL GL L ++
Sbjct: 196 LTNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVL------KF 249
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
G+ + +VD+ + G + + N M + + V W S
Sbjct: 250 GLNSVVNLGNALVDMYGKFGDLESSMHVFNGMQ-EKNEVSWNS 291
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 172/566 (30%), Positives = 277/566 (48%), Gaps = 45/566 (7%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-NVVSWTAMIAGCS 112
GR++H +I+ + + D L+ ++ MY C +A F K+ R N+V+W MI G
Sbjct: 161 GRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFV 220
Query: 113 QNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
+N +++LY +F ACS + GRQ+H VIK
Sbjct: 221 ENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPY 280
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
+L+ MY K + DA+ VF + K+V +MI+AF G +AL +N+M G
Sbjct: 281 VCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKM-KAG 339
Query: 233 AYQPNEFIFGSVFSACS-----NFARILFNEI---------------------------- 259
+ F S+ S CS +F R + E+
Sbjct: 340 ETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDA 399
Query: 260 -------DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
D+ +W ++IAG + +A+ LF M + D + S++ A +G
Sbjct: 400 DSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGL 459
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
+ G +H + IK G +S+V V +++ MY+K +A +VF + N + V+WNS+
Sbjct: 460 ENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSM-PNKNLVAWNSM 518
Query: 373 IAACLQHNQAEEL-FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
I+ C N E+ L ++L D ++ V+ A + +A+L LH Y +
Sbjct: 519 IS-CYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQ 577
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
+ D+ V N L+D+Y+KCG L A+ +F M ++V+W+S+I GY G +EA++LF
Sbjct: 578 IPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFK 637
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
M+ +P+ VT + ++T+CSH G+VEEGL+L+++M EYG+ P EH + VVDLL RA
Sbjct: 638 EMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRA 697
Query: 552 GCVHEAEDFINQMACDADIVVWKSLL 577
G + +A FI M DAD VW LL
Sbjct: 698 GRLDDAYSFIRGMPIDADRSVWLCLL 723
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 163/626 (26%), Positives = 288/626 (46%), Gaps = 78/626 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + +L +Q Y++AL + + ++ + T+ L+ C+SL +L GR +H I+
Sbjct: 24 NSKIKALVQQGKYSQALELHSKTPHSA-LTTAKFTFPSLLKTCASLSNLYHGRTIHASIV 82
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-----NVVSWTAMIAGCSQNYQE 117
Q D + ++NMY KCG L A FDKM + ++ W +I G +
Sbjct: 83 TMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHF 142
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
+ + + +M + L GRQ+H ++I++ + AL
Sbjct: 143 EEGLAQFCRMQE-------------------LSWYMAGRQIHGYIIRNMFEGDPYLETAL 183
Query: 178 IAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLG-----YELEAL--------- 222
I MY+ R ++A ++F + R ++ +W MI F + G EL +L
Sbjct: 184 IGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLV 243
Query: 223 ----------CHFNEMLHHGA----------YQPNEFIFGSVF-----SACSNFARILFN 257
C E+L G +Q + ++ S+ S A+ +F+
Sbjct: 244 SASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFD 303
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL--CACIGRLTL 315
++ ++ NA+I+ + A +A+ L+++M+ E D T+ SLL C+ +G
Sbjct: 304 QVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDF 363
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
G VH+ +IK SNV + +A+LTMY KC +A VF + K D V+W S+IA
Sbjct: 364 --GRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTM-KERDVVAWGSMIAG 420
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
Q+ + ++ LF M +K D V+ A + ++E+ +H + K GL D
Sbjct: 421 FCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESD 480
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
VFV L+D+Y K G SA +F+ M N ++V+W+S+I Y+ G + ++ L ++
Sbjct: 481 VFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQ 540
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHC-SCVVDLLARAG 552
G + V++ VL A S V + +G LH Y+I IP+ + ++D+ + G
Sbjct: 541 HGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQ----IPSDLQVENALIDMYVKCG 596
Query: 553 CVHEAEDFINQMACDADIVVWKSLLA 578
C+ A+ M ++V W S++A
Sbjct: 597 CLKYAQLIFENMP-RRNLVTWNSMIA 621
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 182/387 (47%), Gaps = 40/387 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T + L+S CS + S GR VH ++ Q +V +Q+ +L MY KCGS EDA F M
Sbjct: 347 TISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTM 406
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R+VV+W +MIAG QN + DA+ L+ M + GV S+I A GL +V LG
Sbjct: 407 KERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGH 466
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H IK S + +L+ MY+KF A VFS + K++ +W SMI+ +S G
Sbjct: 467 LIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNG 526
Query: 217 YELEALCHFNEMLHHG----------------------------AYQ-----------PN 237
++ ++L HG AYQ N
Sbjct: 527 LPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVEN 586
Query: 238 EFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
I V C +A+++F + +L +WN++IAG SH N EA+ LF EM+ E P
Sbjct: 587 ALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAP 646
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
D +T +L+ +C + +G+ + + I+ G + + +++ + + L +A
Sbjct: 647 DEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSF 706
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAE 383
+ + +AD W ++ AC H E
Sbjct: 707 IRGMPIDADRSVWLCLLFACRAHRNME 733
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 230/502 (45%), Gaps = 29/502 (5%)
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
S + I Q + + A++L+ + S + +FTF S++K C+ L ++ GR +HA +
Sbjct: 22 SINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASI 81
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR-----KDVTSWGSMIAAFSKLGY 217
+ S +LI MY K + A VF ++ D+T W +I + K G+
Sbjct: 82 VTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGH 141
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSV------------------FSACSN--FARILFN 257
E L F M Y I G + +S+CS A LF
Sbjct: 142 FEEGLAQFCRMQELSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFG 201
Query: 258 EIDS-PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
++++ ++ +WN +I G + +++ L+S ++ + AC L
Sbjct: 202 KLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLD 261
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
G QVH +IKM F + VC ++LTMYAK + +A VF ++ + N++I+A
Sbjct: 262 FGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELR-NAMISAF 320
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
+ + +A + L+++M A + D T + ++ C+ + S + +H + K + +V
Sbjct: 321 IGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNV 380
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
+ + L+ +Y KCGS A +F M+ DVV+W S+I G+ Q +AL LF M
Sbjct: 381 AIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKE 440
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
GV + + V++A + VE G HL + G+ +VD+ ++ G
Sbjct: 441 GVKADSDVMTSVISAGLGLENVELG-HLIHGFAIKRGLESDVFVACSLVDMYSKFGFAES 499
Query: 557 AEDFINQMACDADIVVWKSLLA 578
AE + M + ++V W S+++
Sbjct: 500 AEMVFSSMP-NKNLVAWNSMIS 520
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 125/245 (51%), Gaps = 2/245 (0%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
++ C+ + +AL + + ++ +ISA L +++LG +H +
Sbjct: 418 IAGFCQNRRFKDALDLFR-AMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRG 476
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ DV + +++MY K G E A M F MP +N+V+W +MI+ S N +I L
Sbjct: 477 LESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLP 536
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
Q+LQ G + +++ A S + ++ G+ LHA+ I+ + S L +NALI MY K
Sbjct: 537 QILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCG 596
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A+ +F + R+++ +W SMIA + G EA+ F EM P+E F ++
Sbjct: 597 CLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEM-KRSETAPDEVTFLALI 655
Query: 246 SACSN 250
++CS+
Sbjct: 656 TSCSH 660
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 109/267 (40%), Gaps = 64/267 (23%)
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F L + S S NS I A +Q + + L S+ S + TF ++ CA +++
Sbjct: 11 FYSLRQTEVSPSINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSN 70
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN-----PDVVSWS 471
L +H I GL D ++ L+++Y+KCG LGSA ++F+ M PD+ W+
Sbjct: 71 LYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWN 130
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGV------------------SPNLVT-LVGVLTAC 512
+I GY ++G +E L F RM+ L P L T L+G+ ++C
Sbjct: 131 PVIDGYFKYGHFEEGLAQFCRMQELSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSC 190
Query: 513 SHV-----------------------------GLVEEGLHLYRIMENEYGIIPTREHCSC 543
S G+ E+ L LY + +N E+C
Sbjct: 191 SRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKN--------ENCKL 242
Query: 544 VVDLLARA--GCVH-EAEDFINQMACD 567
V A C H E DF Q+ CD
Sbjct: 243 VSASFTGAFTACSHGEVLDFGRQVHCD 269
>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g47840
gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 706
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 154/536 (28%), Positives = 262/536 (48%), Gaps = 44/536 (8%)
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY--IQMLQSGVMPGQFTFGS 141
G+L AR FDKMP ++VSWT++I ++A+ L+ ++++ V P
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
++KAC ++ G LHA+ +K+ S + ++L+ MY + +I + VFS + ++
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------- 254
+W ++I G E L +F+EM + + F AC+ ++
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEM-SRSEELSDTYTFAIALKACAGLRQVKYGKAIH 232
Query: 255 ---------------------------------LFNEIDSPDLASWNALIAGVASHSNAN 281
LF + D+ SW +LI
Sbjct: 233 THVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEV 292
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
+A+ F +MR+ ++ P+ T S+ AC L G Q+H ++ +G + ++ V N+++
Sbjct: 293 KAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMM 352
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
MY+ C L +A ++F+ + + D +SW++II Q EE F+ FS M S KP
Sbjct: 353 KMYSTCGNLVSASVLFQGM-RCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTD 411
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
++ MA +E Q+H GL + V + L+++Y KCGS+ A +F
Sbjct: 412 FALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGE 471
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
+ D+VS +++I GYA+ G EA+ LF + +G P+ VT + VLTAC+H G ++ G
Sbjct: 472 TDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLG 531
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
H + +M+ Y + P +EH C+VDLL RAG + +AE IN+M+ D VVW +LL
Sbjct: 532 FHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLL 587
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 194/434 (44%), Gaps = 53/434 (12%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPS-TYAGLISACSSLRSLQLGRKVHDHILLS 64
++ L Y E L FS+ + + + + T+A + AC+ LR ++ G+ +H H+++
Sbjct: 181 ITGLVHAGRYKEGLTY--FSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVR 238
Query: 65 KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
+ + N + MY +CG ++D F+ M +R+VVSWT++I + QE A++ +
Sbjct: 239 GFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETF 298
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
I+M S V P + TF S+ AC+ L + G QLH +V+ L N+++ MY+
Sbjct: 299 IKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTC 358
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
++ A +F G+ +D+ SW ++I + + G+ E +F+ M G +P +F S+
Sbjct: 359 GNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGT-KPTDFALASL 417
Query: 245 FSACSNFARI----------------------------------------LFNEIDSPDL 264
S N A I +F E D D+
Sbjct: 418 LSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDI 477
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI--GRLTL---YQGM 319
S A+I G A H + EA+ LF + PD +T S+L AC G+L L Y M
Sbjct: 478 VSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNM 537
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+Y ++ + ++ + + L +A + E+ D V W +++ AC
Sbjct: 538 MQETYNMRPAKEHY----GCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAK 593
Query: 380 NQAEELFRLFSRML 393
E R R+L
Sbjct: 594 GDIERGRRAAERIL 607
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/475 (30%), Positives = 246/475 (51%), Gaps = 53/475 (11%)
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
R +H H++K+ L L+ +Y+K + A VF + R++V +W +++ + +
Sbjct: 77 ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 136
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE---------------- 258
+ L AL F +ML GAY P+ + G V +ACS+ I F +
Sbjct: 137 NSHPLLALQLFIKMLEAGAY-PSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTS 195
Query: 259 ------------------------IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
I D+ SW ++I+ + A ++S F +M
Sbjct: 196 IGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDG 255
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ P+ T+ S+L AC LTL G Q+HS IK+G+ S++ + N+I+ +Y KC L A
Sbjct: 256 MKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQ 315
Query: 355 LVFKELGKNADSVSWNSIIAACLQ-----------HNQAEELFRLFSRMLASQIKPDHIT 403
+F+ + + + V+WN++IA + H +F ++ S +KPD T
Sbjct: 316 KLFEGM-ETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFT 374
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
F+ V+ C+ + +LE Q+H I K+G+ DV V L+ +Y KCGS+ A K F M
Sbjct: 375 FSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMP 434
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
+ ++SW+S+I G+A+ G +AL+LF MR +G+ PN VT VGVL+ACSH GL +E L+
Sbjct: 435 SRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALY 494
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +M+ +Y I P +H +C++D+ R G V EA D +++M + + +W L+A
Sbjct: 495 YFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIA 549
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 163/566 (28%), Positives = 265/566 (46%), Gaps = 64/566 (11%)
Query: 23 DFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGK 82
D + RI S Y L+ C R +H HI+ + D+ + ++N+Y K
Sbjct: 46 DAEEPKLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSK 105
Query: 83 CGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI 142
CG +E A FD +P+RNV +WT ++ G QN A++L+I+ML++G P +T G +
Sbjct: 106 CGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIV 165
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
+ ACS L S+ G+Q+HA++IK N+L + Y+KF R+ A F I KDV
Sbjct: 166 LNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDV 225
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------- 251
SW S+I++ G +L F +ML G +PNE+ SV SAC
Sbjct: 226 ISWTSVISSCCDNGQAARSLSFFMDMLSDGM-KPNEYTLTSVLSACCVMLTLDLGAQIHS 284
Query: 252 -----------------------------ARILFNEIDSPDLASWNALIAG--------- 273
A+ LF +++ +L +WNA+IAG
Sbjct: 285 LSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAE 344
Query: 274 --VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
VA+H + + A+++F ++ + PD T S+L C + L QG Q+H IIK G
Sbjct: 345 DDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVL 404
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
++V V A+++MY KC + A F E+ +SW S+I +H +++ +LF
Sbjct: 405 ADVVVGTALVSMYNKCGSIDKASKAFLEMPSRT-MISWTSMITGFARHGLSQQALQLFED 463
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF-VMNG---LMDIYI 447
M IKP+ +TF V+ AC+ + + Y +++ VM+ L+D+Y+
Sbjct: 464 MRLVGIKPNQVTFVGVLSACSHAG---LADEALYYFELMQKQYNIKPVMDHFACLIDMYL 520
Query: 448 KCGSLGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV-TL 505
+ G + A + + M P+ WS LI G G D L + + L + P V T
Sbjct: 521 RLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSD--LGFYAAEQLLKLKPKDVETY 578
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENE 531
V +L G ++ + ++M+ E
Sbjct: 579 VSLLNMHISAGRWKDVSKVRKLMKEE 604
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 136/274 (49%), Gaps = 3/274 (1%)
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
LL CI R + +H +I+K GF ++ V ++ +Y+KC V+ +A VF L +
Sbjct: 64 LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRR- 122
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
+ +W +++ +Q++ +LF +ML + P + T V+ AC+ + S+E Q+H
Sbjct: 123 NVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVH 182
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
Y+ K + FD + N L Y K L A K F ++ DV+SW+S+I G
Sbjct: 183 AYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAA 242
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV 544
+L F M S G+ PN TL VL+AC + ++ G ++ + + G + + +
Sbjct: 243 RSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHS-LSIKLGYGSSILIKNSI 301
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ L + G + EA+ M ++V W +++A
Sbjct: 302 MYLYLKCGWLIEAQKLFEGMET-LNLVTWNAMIA 334
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 188/591 (31%), Positives = 289/591 (48%), Gaps = 56/591 (9%)
Query: 38 YAGLISACSSLRSL-QLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+ ++ ACS+ L + GR++H + + + D + +L+MYGKC S+EDAR FD +
Sbjct: 102 FVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGI 161
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG------ 150
+ VV W AMI +Q AI+++ ML GV + TF ++ ACS L
Sbjct: 162 RHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAK 221
Query: 151 --SVCLGRQLHAHVIK------------------------SEHGSHLIAQNALIAMYTKF 184
+C+ + H H+ S H LI A+I YT+
Sbjct: 222 LVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSRHRLELILATAMITQYTQR 281
Query: 185 DRILDARNVF-----SGIARKDVTSWGSMIAAFSKLGYELEALCH-------FNEMLHHG 232
+R +A +F G+ + + A G E + H F+ ++ G
Sbjct: 282 ERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAG 341
Query: 233 AYQPNEFIFGSVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
N I +++ C + A +F + D+ SWN +IA HS EA+ L M
Sbjct: 342 ----NALI--NMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLM 395
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ + D ++ + L C L +G +HS+I++ G ++V + NAIL MY C
Sbjct: 396 QLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKST 455
Query: 351 CNALLVFKELGKNADSVSWNSIIAA-CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+A VF+ + K D VSWN++I A Q + E LF +M PD I+F +
Sbjct: 456 DDASRVFRAM-KARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALS 514
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
ACA ASL LH I +TGL ++ V N ++++Y K GSL ARK+F M PDV+S
Sbjct: 515 ACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVIS 574
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+ +I +AQ G D+ L+ F RM G PN VT V V++ACSH GLV++G+ L+ +
Sbjct: 575 WNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLL 634
Query: 530 NEYGII-PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+++ I P EH C+VDL+ARAG + AE FI D V+ ++L +
Sbjct: 635 HDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGA 685
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 170/586 (29%), Positives = 276/586 (47%), Gaps = 49/586 (8%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
YA L+ + RSL LG++VH I S + + ++ MY CGSL DA+ FD+MP
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC-LGR 156
++ ++W +I Q A+ L+ M GV P F +++ ACS + GR
Sbjct: 61 VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H + + S L+ MY K + DAR VF GI K V W +MI A+++
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--------------------------SN 250
+ +A+ F ML G + F V AC S+
Sbjct: 181 HHEQAIQVFYAMLLEGV-KAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSS 239
Query: 251 FARILFNEIDS---------------PDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
FA L N S +L A+I +EA+ LF M +
Sbjct: 240 FATALVNFYGSCGDLEQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVMLLEGV 299
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
D + ++L AC G L +G +H ++ ++ FD +V NA++ MY KC L A+
Sbjct: 300 KLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVE 359
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF+ + ++ D +SWN+IIAA QH+Q E L M +K D I+F + + CA
Sbjct: 360 VFRSM-QHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASE 418
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+L +H +I ++G+ DV + N ++D+Y C S A ++F M+ D VSW+++I
Sbjct: 419 ALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMIT 478
Query: 476 GY-AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYG 533
Y AQ EAL LF +M+ G P++++ V L+AC+ + EG L+ RI E G
Sbjct: 479 AYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRET--G 536
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + V+++ A++G + A +M D++ W ++++
Sbjct: 537 LESNMTVANAVLNMYAKSGSLVLARKMFGKMPL-PDVISWNGMISA 581
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 119/215 (55%), Gaps = 2/215 (0%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++ + C++ +L GR +H I+ S + DV+L N IL+MYG C S +DA F M
Sbjct: 406 SFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAM 465
Query: 97 PQRNVVSWTAMI-AGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
R+ VSW AMI A +Q ++A+ L+ QM G MP +F + + AC+ S+ G
Sbjct: 466 KARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEG 525
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ LH + ++ S++ NA++ MY K ++ AR +F + DV SW MI+AF++
Sbjct: 526 KLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQH 585
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
G+ + L F M H G PN+ F SV SACS+
Sbjct: 586 GHADQVLRFFRRMNHEGKL-PNDVTFVSVVSACSH 619
>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 944
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 156/549 (28%), Positives = 271/549 (49%), Gaps = 41/549 (7%)
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
V+ N +++MY KCG + A+ FD+M R+ VSW M+AG +N + ++L +M +
Sbjct: 234 VVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRG 293
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
V + + + + + + G++++ + ++ S ++ ++ MY K + A
Sbjct: 294 NVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKA 353
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS- 249
R +F + +D+ +W + ++A + GY E L F M + G +P++ I + S C+
Sbjct: 354 RELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEG-LKPDKAILSILVSGCTE 412
Query: 250 ---------------------------------------NFARILFNEIDSPDLASWNAL 270
+A LFN + D+ WN L
Sbjct: 413 ISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTL 472
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I G + + + A+ +F+ ++ +LPD T+ L AC L G +H I K GF
Sbjct: 473 INGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGF 532
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+S++ V A++ MYAKC LC+ +F D VSWN +IA L + + E F
Sbjct: 533 ESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFR 592
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
RM ++P+ +TF ++ A + ++ L H I + G + N L+D+Y KCG
Sbjct: 593 RMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCG 652
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
L + K F+ MEN D +SW++++ YA G G+ A+ LF+ M+ V + V+ + VL+
Sbjct: 653 QLRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLS 712
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
AC H GL++EG ++ M ++ + P+ EH +C+VDLL AG E +N+M + D
Sbjct: 713 ACRHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDA 772
Query: 571 VVWKSLLAS 579
VW +LLA+
Sbjct: 773 RVWGALLAA 781
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 163/619 (26%), Positives = 297/619 (47%), Gaps = 50/619 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N ++ + K + +++A+ Y I ++P T+ ++ AC+S G ++
Sbjct: 68 NSFIKAYSKFHHFHKAINLY---HTILKIGLKPDKFTFNFVLKACTSALDFHEGVNIYKD 124
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
I+ + + DV + +++M+ K G L++AR FDKMP ++ V W AMI+G SQ+ +A
Sbjct: 125 IVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEA 184
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
++++ +M G + + ++ A S LG V + +H +V++ + N+LI M
Sbjct: 185 LEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICG--VVSNSLIDM 242
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM------------ 228
Y K + A+ VF + +D SW +M+A + K G E L ++M
Sbjct: 243 YCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAV 302
Query: 229 ------------LHHGAYQPN---------EFIFGS----VFSACSNF--ARILFNEIDS 261
L G N + + + +++ C AR LF ++
Sbjct: 303 VNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEG 362
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
DL +W+A ++ + E +S+F M+ L PD + L+ C + G +
Sbjct: 363 RDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIM 422
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H Y IK +S++ + +++MY + + A+ +F + + D V WN++I ++
Sbjct: 423 HCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRM-QIKDIVVWNTLINGFTKYGD 481
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+F+R+ S I PD T + ACA M L++ T LH I K+G D+ V
Sbjct: 482 PHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVA 541
Query: 442 LMDIYIKCGSLGSARKLFNFMEN-PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
LMD+Y KCGSL S +LF ++ D VSW+ +I GY G +EA+ F RM+ V P
Sbjct: 542 LMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRP 601
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
NLVT V +L A S++ ++ E + + + G + + ++D+ A+ G + +E
Sbjct: 602 NLVTFVTILPAVSYLSILREAMAFHTCII-RMGFLSCTLIGNSLIDMYAKCGQLRYSEKC 660
Query: 561 INQMACDADIVVWKSLLAS 579
++M + D + W ++L++
Sbjct: 661 FHEME-NKDTISWNAMLSA 678
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 132/545 (24%), Positives = 247/545 (45%), Gaps = 42/545 (7%)
Query: 74 NHILNMYGKC---GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
NH L + C L F ++ +++ + + I S+ + + AI LY +L+
Sbjct: 34 NHYLKLINSCKYINPLLQIHTHFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKI 93
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G+ P +FTF ++KAC+ G ++ ++ + + +LI M+ K + +A
Sbjct: 94 GLKPDKFTFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNA 153
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG------------------ 232
RNVF + KD W +MI+ S+ EAL F M G
Sbjct: 154 RNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRL 213
Query: 233 ----------AYQPNEFIFGSV-------FSACSNF--ARILFNEIDSPDLASWNALIAG 273
Y I G V + C + A+ +F+ + D SW ++AG
Sbjct: 214 GDVGCCKSIHGYVVRRSICGVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAG 273
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
+ E + L +MR + + + V + L L +G ++++Y ++MG S+
Sbjct: 274 YVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSD 333
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
+ V I+ MYAKC L A +F L + D V+W++ ++A ++ E+ +F M
Sbjct: 334 IVVATPIVCMYAKCGELKKARELFLSL-EGRDLVAWSAFLSALVETGYPREVLSIFQVMQ 392
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
+KPD + ++ C +++++ + +HCY K + D+ ++ L+ +YI+
Sbjct: 393 YEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFT 452
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
A LFN M+ D+V W++LI G+ ++G AL++F R++ G+ P+ T+VG+ +AC+
Sbjct: 453 YAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACA 512
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
+ ++ G L+ +E G ++D+ A+ G + E D V W
Sbjct: 513 IMDDLDLGTCLHGGIEKS-GFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSW 571
Query: 574 KSLLA 578
++A
Sbjct: 572 NVMIA 576
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 128/573 (22%), Positives = 237/573 (41%), Gaps = 115/573 (20%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
N+++ + + +R L+ G++++++ L D+V+ I+ MY KCG L+ A
Sbjct: 294 NVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKA 353
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R F + R++V+W+A ++ + + + ++ M G+ P + ++ C+ +
Sbjct: 354 RELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEI 413
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
++ LG+ +H + IK++ S + L++MY +F+ A +F+ + KD+ W ++I
Sbjct: 414 SNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLI 473
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------- 249
F+K G AL FN + G P+ +FSAC+
Sbjct: 474 NGFTKYGDPHLALEMFNRLQLSGIL-PDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGF 532
Query: 250 ---------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
+ R+ D SWN +IAG + +NEA+S F
Sbjct: 533 ESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFR 592
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
M+ + P+ +T ++L A L + M H+ II+MGF S + N+++ MYAKC
Sbjct: 593 RMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCG 652
Query: 349 VLCNALLVFKELGKNADSVSWN-----------------------------------SII 373
L + F E+ +N D++SWN S++
Sbjct: 653 QLRYSEKCFHEM-ENKDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVL 711
Query: 374 AACLQHNQAEELFRLFSRMLASQ-IKP--DHIT-----------FNDVMGACAKMAS--- 416
+AC +E + +F+ M ++P +H F++V+ KM +
Sbjct: 712 SACRHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPD 771
Query: 417 ------LEMVTQLHCYITKTGLAFDVFVMNG---------LMDIYIKCGSLGSARKLFNF 461
L ++H +T +A + L DIY +CG AR+ +
Sbjct: 772 ARVWGALLAACKIHSNVTLGEVAVHHLLKLEPRNPVHHVVLSDIYAQCGRWNDARRTRSH 831
Query: 462 MENPDVVSWSSLILGYAQFGC-GDEALKLFTRM 493
+ N + I GY+ G +E K TR+
Sbjct: 832 INNHGLKK----IPGYSWVGAHKNEMEKKPTRI 860
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 164/324 (50%), Gaps = 5/324 (1%)
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F +I +P L +N+ I + + ++A++L+ + L PD T + +L AC L
Sbjct: 56 FLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDF 115
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
++G+ ++ I+ G + +V + +++ M+ K L NA VF ++ D V WN++I+
Sbjct: 116 HEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVK-DGVCWNAMISG 174
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
Q E +F RM + D ++ ++ A +++ + +H Y+ + +
Sbjct: 175 LSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSIC-- 232
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
V N L+D+Y KCG + SA+++F+ M D VSW++++ GY + GC E L+L +MR
Sbjct: 233 GVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRR 292
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
V N V +V L + + +E+G +Y + G++ + +V + A+ G +
Sbjct: 293 GNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYAL-QMGLMSDIVVATPIVCMYAKCGELK 351
Query: 556 EAEDFINQMACDADIVVWKSLLAS 579
+A + + D+V W + L++
Sbjct: 352 KARELFLSLE-GRDLVAWSAFLSA 374
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 164/551 (29%), Positives = 271/551 (49%), Gaps = 57/551 (10%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N IL+ Y G L A+ F P RN +WT M+ + + +DA+ L+ ML GV+
Sbjct: 78 NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 137
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P + T +++ C LH IK +H+ N L+ Y K + AR V
Sbjct: 138 PDRVTVTTVLNLPG-----CTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 192
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA- 252
F + KD ++ +M+ SK G +AL F M G F F S+ + + A
Sbjct: 193 FLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAG-IPATHFTFSSILTVAAGMAH 251
Query: 253 ---------------------------------------RILFNEIDSPDLASWNALIAG 273
R LF+E+ D S+N +IA
Sbjct: 252 LLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAA 311
Query: 274 VASHSNANEAMSLFSEMR----DRELLPDGLTVHSLLCACIGRLT-LYQGMQVHSYIIKM 328
A + A + LF EM+ DR++LP ++ + + G L ++ G Q+H+ ++ +
Sbjct: 312 YAWNQCAATVLRLFREMQKLGFDRQVLP-----YATMLSVAGSLPDVHIGKQIHAQLVLL 366
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
G S + NA++ MY+KC +L A F + + ++SW ++I +Q+ Q EE +L
Sbjct: 367 GLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKS-AISWTALITGYVQNGQHEEALQL 425
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
FS M + ++PD TF+ ++ A + +A + + QLH Y+ ++G VF + L+D+Y K
Sbjct: 426 FSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAK 485
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
CG L A + F+ M + +SW+++I YA +G A+K+F M G +P+ VT + V
Sbjct: 486 CGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSV 545
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
L ACSH GL +E + + +M+++Y I P +EH +CV+D L R GC + + + +M A
Sbjct: 546 LAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKA 605
Query: 569 DIVVWKSLLAS 579
D ++W S+L S
Sbjct: 606 DPIIWTSILHS 616
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 160/304 (52%), Gaps = 29/304 (9%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
YA ++S SL + +G+++H ++L + +L N +++MY KCG L+ A+ F
Sbjct: 340 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 399
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+++ +SWTA+I G QN Q +A++L+ M ++G+ P + TF SIIKA S L + LGRQ
Sbjct: 400 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 459
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
LH+++I+S + S + + + L+ MY K + +A F + ++ SW ++I+A++ G
Sbjct: 460 LHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGE 519
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASH 277
A+ F MLH G + P+ F SV +ACS+ N L
Sbjct: 520 AKNAIKMFEGMLHCG-FNPDSVTFLSVLAACSH-----------------NGL------- 554
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
A+E M F M+ + + ++ + +GR+ + QV +++M F ++ +
Sbjct: 555 --ADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFS--QVQKMLVEMPFKADPIIW 610
Query: 338 NAIL 341
+IL
Sbjct: 611 TSIL 614
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 167/342 (48%), Gaps = 15/342 (4%)
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKL--GYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
LDAR V +G DV ++ + S L G+ A F++M H + N + S +
Sbjct: 30 LDARMVKTGF---DVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLIL--SAY 84
Query: 246 SACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
S+ + A+ LF + +W ++ A+ ++A+SLF M ++PD +TV
Sbjct: 85 SSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVT 144
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
++L L +H + IK G D++V VCN +L Y K +L A VF E+ +
Sbjct: 145 TVL-----NLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEM-HD 198
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
D+V++N+++ C + + +LF+ M + I H TF+ ++ A MA L + Q+
Sbjct: 199 KDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQV 258
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H + ++ +VFV N L+D Y KC L R+LF+ M D VS++ +I YA C
Sbjct: 259 HALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCA 318
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
L+LF M+ LG ++ +L+ + V G ++
Sbjct: 319 ATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIH 360
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 181/418 (43%), Gaps = 51/418 (12%)
Query: 11 KQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
K+ L+ +AL + + I T++ +++ + + L LG +VH +L S +V
Sbjct: 213 KEGLHTQALQLF-AAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNV 271
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ N +L+ Y KC L+D R FD+MP+R+ VS+ +IA + N ++L+ +M +
Sbjct: 272 FVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKL 331
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G + +++ L V +G+Q+HA ++ S + NALI MY+K + A
Sbjct: 332 GFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAA 391
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
++ FS + K SW ++I + + G EAL F++M G +P+ F S+ A S+
Sbjct: 392 KSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG-LRPDRATFSSIIKASSS 450
Query: 251 FARI----------------------------------------LFNEIDSPDLASWNAL 270
A I F+E+ + SWNA+
Sbjct: 451 LAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAV 510
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC-----IGRLTLYQGMQVHSYI 325
I+ A + A A+ +F M PD +T S+L AC Y + H Y
Sbjct: 511 ISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYS 570
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
I + V + + + C +LV E+ AD + W SI+ +C H E
Sbjct: 571 ISPWKEHYACVIDTLGRV--GCFSQVQKMLV--EMPFKADPIIWTSILHSCRIHGNQE 624
>gi|302813890|ref|XP_002988630.1| hypothetical protein SELMODRAFT_128138 [Selaginella moellendorffii]
gi|300143737|gb|EFJ10426.1| hypothetical protein SELMODRAFT_128138 [Selaginella moellendorffii]
Length = 612
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 171/589 (29%), Positives = 280/589 (47%), Gaps = 87/589 (14%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK- 95
+Y+ L+ C ++L GRK+HDH+ S C+ D L N ++ MYGKCGSLE+AR FD
Sbjct: 19 SYSRLLRWCGEAQALAEGRKIHDHVSKSDCRADRRLANMVIGMYGKCGSLEEARRVFDTI 78
Query: 96 -MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP-------------------- 134
M RN+ SW+ M++ C N + A+ + +M++ GV+P
Sbjct: 79 AMAHRNLFSWSEMVSACVLNGDYSGAVGFFEKMVEEGVVPDKCLATVMITAHIRNGNPFK 138
Query: 135 ---------------GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
+ + ++ AC+ L + GR+ HA + S + + L+
Sbjct: 139 ALVIYWRMHAEGFRPNRASLLGLLAACATLEDLEQGRKFHATFLASGFMMDVFVETTLVN 198
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY K + +AR V G+ K V SW +MI A+++ + EAL +M G P++
Sbjct: 199 MYGKCGSLAEARGVLEGMEVKSVVSWNAMITAYAQHRHGREALELLKKMDLEG-IPPSKV 257
Query: 240 IFGSVFSACSNFARILFNEID---------SPDLASWNALIAGVASHSNANEAMSLFSEM 290
F S+ AC++ + D+ N L++ ++ +EA +F EM
Sbjct: 258 TFVSILDACASSGDLTRGRSAHSRAIATGFGGDVNVNNTLVSMYGKCASLDEARKVFDEM 317
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
R+LL D N+ V N ++ +YAKC L
Sbjct: 318 PSRDLL----------------------------------DGNI-VANFLINLYAKCGSL 342
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
N+ VF L K D VSWN+++ A +Q + +E +LF M KPD +++ + A
Sbjct: 343 ENSKCVFDGL-KKKDVVSWNAMLTAYIQLDSPKEALKLFQAMDMEGTKPDQVSYVLALDA 401
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
CA + H + GL D V N ++++Y +CG+L +A + F ++ DVVSW
Sbjct: 402 CAGAVAPTQGKLFHSRVASQGLDSDDTVRNAIVNMYAECGNLDAANREFERIKRRDVVSW 461
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
+ ++ AQ G ++LKLF +M+ G + V+ + + +CSH GLV++ + + M
Sbjct: 462 TVMVAANAQHGNPRDSLKLFWKMQQDGTKADDVSFLCAILSCSHSGLVKDAMACFSSMVE 521
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++GI P EH CVVD LA+ G + EAE+F M D V W++ L++
Sbjct: 522 DHGIQPLAEHFGCVVDALAKVGRLGEAEEFSLAM----DAVSWRAFLSA 566
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 221/463 (47%), Gaps = 41/463 (8%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
+ALV Y + + R ++ GL++AC++L L+ GRK H L S DV ++ +
Sbjct: 138 KALVIY-WRMHAEGFRPNRASLLGLLAACATLEDLEQGRKFHATFLASGFMMDVFVETTL 196
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
+NMYGKCGSL +AR + M ++VVSW AMI +Q+ +A++L +M G+ P +
Sbjct: 197 VNMYGKCGSLAEARGVLEGMEVKSVVSWNAMITAYAQHRHGREALELLKKMDLEGIPPSK 256
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG 196
TF SI+ AC+ G + GR H+ I + G + N L++MY K + +AR VF
Sbjct: 257 VTFVSILDACASSGDLTRGRSAHSRAIATGFGGDVNVNNTLVSMYGKCASLDEARKVFDE 316
Query: 197 IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--ARI 254
+ +D+ G+++A F ++++ C + ++
Sbjct: 317 MPSRDLLD-GNIVANF----------------------------LINLYAKCGSLENSKC 347
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+F+ + D+ SWNA++ + EA+ LF M PD ++ L AC G +
Sbjct: 348 VFDGLKKKDVVSWNAMLTAYIQLDSPKEALKLFQAMDMEGTKPDQVSYVLALDACAGAVA 407
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
QG HS + G DS+ V NAI+ MYA+C L A F+ + K D VSW ++A
Sbjct: 408 PTQGKLFHSRVASQGLDSDDTVRNAIVNMYAECGNLDAANREFERI-KRRDVVSWTVMVA 466
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY---ITKTG 431
A QH + +LF +M K D ++F + +C+ ++ + C+ + G
Sbjct: 467 ANAQHGNPRDSLKLFWKMQQDGTKADDVSFLCAILSCSHSGLVK--DAMACFSSMVEDHG 524
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+ ++D K G LG A + M D VSW + +
Sbjct: 525 IQPLAEHFGCVVDALAKVGRLGEAEEFSLAM---DAVSWRAFL 564
>gi|15241649|ref|NP_196466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171897|sp|Q9FNN9.1|PP370_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g08490
gi|9759343|dbj|BAB09998.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003927|gb|AED91310.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 849
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 174/626 (27%), Positives = 308/626 (49%), Gaps = 83/626 (13%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL-EDAR 90
+PS T+A ++ C L G+ +H +I+ + + D ++ N +++MY K G + DA
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAY 178
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD + ++VVSW A+IAG S+N DA + + ML+ P T +++ C+ +
Sbjct: 179 TAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMD 238
Query: 151 S--VCL-GRQLHAHVI-KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
C GRQ+H++V+ +S +H+ N+L++ Y + RI +A ++F+ + KD+ SW
Sbjct: 239 KNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWN 298
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------------- 250
+IA ++ +A F+ ++H G P+ S+ C+
Sbjct: 299 VVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILR 358
Query: 251 -----------------FARI--------LFNEIDSPDLASWNALIAGVASHSNANEAMS 285
+AR F+ + + D+ SWNA++ A + ++
Sbjct: 359 HSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLN 418
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF--DSNVP-VCNAILT 342
L + + + D +T+ SLL CI + + +VH Y +K G D P + NA+L
Sbjct: 419 LLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLD 478
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ---HNQAEELFR------------ 387
YAKC + A +F L + VS+NS+++ + H+ A+ LF
Sbjct: 479 AYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSL 538
Query: 388 ----------------LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+F + A ++P+ +T +++ CA++ASL +V Q H YI + G
Sbjct: 539 MVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGG 598
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
L D+ + L+D+Y KCGSL A +F D+V +++++ GYA G G EAL +++
Sbjct: 599 LG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYS 657
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
M + P+ V + +LTAC H GL+++GL +Y + +G+ PT E +C VDL+AR
Sbjct: 658 HMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARG 717
Query: 552 GCVHEAEDFINQMACDADIVVWKSLL 577
G + +A F+ QM + + +W +LL
Sbjct: 718 GRLDDAYSFVTQMPVEPNANIWGTLL 743
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 164/635 (25%), Positives = 273/635 (42%), Gaps = 111/635 (17%)
Query: 38 YAGLISACSSLRSLQLGRKVHD------HILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+ ++ AC+S+ L GR +H HI S+ + +LNMY KC ++D +
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSE------VSKSVLNMYAKCRRMDDCQK 77
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGLG 150
F +M + V W ++ G S + + ++ + M P TF ++ C LG
Sbjct: 78 MFRQMDSLDPVVWNIVLTGLSVSCGR-ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLG 136
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL-DARNVFSGIARKDVTSWGSMI 209
G+ +H+++IK+ + NAL++MY KF I DA F GIA KDV SW ++I
Sbjct: 137 DSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAII 196
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------ 251
A FS+ +A F ML +PN +V C++
Sbjct: 197 AGFSENNMMADAFRSFCLMLKEPT-EPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQ 255
Query: 252 --------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
A LF + S DL SWN +IAG AS+ +A
Sbjct: 256 RSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQ 315
Query: 286 LFSEMRDR-ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF-DSNVPVCNAILTM 343
LF + + ++ PD +T+ S+L C L G ++HSYI++ + + V NA+++
Sbjct: 316 LFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISF 375
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
YA+ A F L D +SWN+I+ A + + L +L I D +T
Sbjct: 376 YARFGDTSAAYWAF-SLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVT 434
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFD---VFVMNGLMDIYIKCGSLGSARK--- 457
++ C + + V ++H Y K GL D + N L+D Y KCG++ A K
Sbjct: 435 ILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFL 494
Query: 458 -----------------------------LFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
LF M D+ +WS ++ YA+ C +EA+
Sbjct: 495 GLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIG 554
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR-----IMENEYGIIPTREHCSC 543
+F +++ G+ PN VT++ +L C+ + LHL R I+ G I +
Sbjct: 555 VFREIQARGMRPNTVTIMNLLPVCAQLA----SLHLVRQCHGYIIRGGLGDIRLK---GT 607
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++D+ A+ G + A + Q D+V++ +++A
Sbjct: 608 LLDVYAKCGSLKHAYS-VFQSDARRDLVMFTAMVA 641
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 118/504 (23%), Positives = 219/504 (43%), Gaps = 59/504 (11%)
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
L SG F ++KAC+ + + GR LH V K H + +++ MY K R+
Sbjct: 13 LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRM 72
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
D + +F + D W ++ S + E + F M +P+ F V
Sbjct: 73 DDCQKMFRQMDSLDPVVWNIVLTGLS-VSCGRETMRFFKAMHFADEPKPSSVTFAIVLPL 131
Query: 248 C-----------------------------------SNFARIL------FNEIDSPDLAS 266
C + F I F+ I D+ S
Sbjct: 132 CVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVS 191
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG---RLTLYQGMQVHS 323
WNA+IAG + ++ +A F M P+ T+ ++L C + G Q+HS
Sbjct: 192 WNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHS 251
Query: 324 YIIKMGF-DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
Y+++ + ++V VCN++++ Y + + A +F +G + D VSWN +IA + +
Sbjct: 252 YVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMG-SKDLVSWNVVIAGYASNCEW 310
Query: 383 EELFRLFSRML-ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK-TGLAFDVFVMN 440
+ F+LF ++ + PD +T ++ CA++ L ++H YI + + L D V N
Sbjct: 311 FKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGN 370
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+ Y + G +A F+ M D++SW++++ +A + L L + + ++
Sbjct: 371 ALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITL 430
Query: 501 NLVTLVGVLTACSHV---GLVEEGLHLYRIMENEYGIIPTREHC---SCVVDLLARAGCV 554
+ VT++ +L C +V G V+E +H Y + + G++ E + ++D A+ G V
Sbjct: 431 DSVTILSLLKFCINVQGIGKVKE-VHGYSV---KAGLLHDEEEPKLGNALLDAYAKCGNV 486
Query: 555 HEAEDFINQMACDADIVVWKSLLA 578
A ++ +V + SLL+
Sbjct: 487 EYAHKIFLGLSERRTLVSYNSLLS 510
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 162/354 (45%), Gaps = 33/354 (9%)
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
+V N +L+ Y GS +DA+M F +M ++ +W+ M+ +++ N+AI ++ ++
Sbjct: 502 LVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQA 561
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD 189
G+ P T +++ C+ L S+ L RQ H ++I+ G + + L+ +Y K +
Sbjct: 562 RGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGD-IRLKGTLLDVYAKCGSLKH 620
Query: 190 ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
A +VF AR+D+ + +M+A ++ G EAL ++ M +P+ ++ +AC
Sbjct: 621 AYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESN-IKPDHVFITTMLTACC 679
Query: 250 NFARI-----LFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
+ I +++ I + P + + + +A ++A S ++M + P+
Sbjct: 680 HAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQM---PVEPNA 736
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL--TMYA-----KCSVLCN 352
+LL AC + G V +++++ D N +L MYA + +
Sbjct: 737 NIWGTLLRACTTYNRMDLGHSVANHLLQAESDDT---GNHVLISNMYAADAKWEGVMELR 793
Query: 353 ALLVFKELGKNADSVSW-------NSIIAACLQHNQAEELFRLFSRMLASQIKP 399
L+ KE+ K A SW N ++ H + + +F L + + +P
Sbjct: 794 NLMKKKEMKKPA-GCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKEP 846
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 7/184 (3%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP+T L+ C+ L SL L R+ H +I+ D+ L+ +L++Y KCGSL+ A
Sbjct: 564 MRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAY 622
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F +R++V +TAM+AG + + + +A+ +Y M +S + P +++ AC G
Sbjct: 623 SVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAG 682
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIA--MYTKFDRILDARNVFSGIA-RKDVTSWGS 207
+ G Q++ I++ HG + A + + R+ DA + + + + WG+
Sbjct: 683 LIQDGLQIY-DSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGT 741
Query: 208 MIAA 211
++ A
Sbjct: 742 LLRA 745
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 173/569 (30%), Positives = 278/569 (48%), Gaps = 52/569 (9%)
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
++ ++L D+ + + + G++ R F+K+ + ++ + +I G S N
Sbjct: 32 QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNG 91
Query: 116 QENDAIKLYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
+I LY + + + + P FT+ I A S L +G LHAH I S+L
Sbjct: 92 LPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVG 151
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG-- 232
+A++ +Y KF R AR VF + +D W +MI+ FS+ Y +++ F +ML G
Sbjct: 152 SAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLS 211
Query: 233 ------------AYQPNEFIFG-----------------------SVFSACSNF--ARIL 255
+ E+ G S++S C RIL
Sbjct: 212 FDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRIL 271
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS-LLCACIGRLT 314
F++ID PDL S+NA+I+G + A++LF RELL G V+S L I
Sbjct: 272 FDQIDQPDLISYNAMISGYTFNHETESAVTLF-----RELLASGQRVNSSTLVGLIPVYL 326
Query: 315 LYQGMQVHSYI----IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
+ +Q+ I +K+G V A+ T+Y + + + A +F E SWN
Sbjct: 327 PFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDE-SPEKSLASWN 385
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
++I+ Q+ + LF M+ Q+ P+ +T ++ ACA++ +L + +H I
Sbjct: 386 AMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSE 444
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
L +V+V L+D+Y KCGS+ AR+LF+ M + +VV+W+++I GY G G EALKLF
Sbjct: 445 RLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLF 504
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
M G+ P VT + +L ACSH GLV EG ++ M N YG P EH +C+VD+L R
Sbjct: 505 YEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGR 564
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
AG + A +FI +M + VW +LL +
Sbjct: 565 AGQLTNALEFIERMPLEPGPAVWGALLGA 593
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 132/450 (29%), Positives = 211/450 (46%), Gaps = 43/450 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + L ++ Y + TN+R TYA ISA S L ++G +H H +
Sbjct: 81 NVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSI 140
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ ++ + + I+++Y K E AR FD MP+R+ V W MI+G S+N D+I+
Sbjct: 141 VDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIR 200
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+++ ML G+ T +++ A + L LG + K S + LI++Y+
Sbjct: 201 VFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYS 260
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE-ALCHFNEMLHHGAYQPNEFIF 241
K + R +F I + D+ S+ +MI+ ++ +E E A+ F E+L G + +
Sbjct: 261 KCGKSCKGRILFDQIDQPDLISYNAMISGYT-FNHETESAVTLFRELLASGQRVNSSTLV 319
Query: 242 G------------------------------SVFSACSN---------FARILFNEIDSP 262
G SV +A + FAR LF+E
Sbjct: 320 GLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEK 379
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
LASWNA+I+G + + A+SLF EM +L P+ +TV S+L AC L G VH
Sbjct: 380 SLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVH 438
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
I +SNV V A++ MYAKC + A +F +L + + V+WN++I H
Sbjct: 439 GLIKSERLESNVYVSTALVDMYAKCGSIVEARQLF-DLMVDKNVVTWNAMITGYGLHGHG 497
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACA 412
+E +LF ML S I P +TF ++ AC+
Sbjct: 498 KEALKLFYEMLQSGIPPTGVTFLSILYACS 527
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 172/410 (41%), Gaps = 45/410 (10%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T A +++A + L+ +LG + DV + ++++Y KCG R+ FD+
Sbjct: 215 TTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQ 274
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ Q +++S+ AMI+G + N++ A+ L+ ++L SG T +I + L
Sbjct: 275 IDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLS 334
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R + +K AL +Y + + + AR +F K + SW +MI+ +++
Sbjct: 335 RLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQN 394
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G A+ F EM+ PN S+ SAC+
Sbjct: 395 GLTDRAISLFQEMMPQ--LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYV 452
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR LF+ + ++ +WNA+I G H + EA+ LF EM +
Sbjct: 453 STALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGI 512
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
P G+T S+L AC + +G ++ HS GF ++ + + L NAL
Sbjct: 513 PPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNAL 572
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
+ + W +++ AC+ H E R+ Q+ P+++ +
Sbjct: 573 EFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLF--QLDPENVGY 620
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 118/222 (53%), Gaps = 8/222 (3%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKC--QPDVVLQNHILNMYGKCGSLEDA 89
R+ ST GLI LQL R + + L QP V + +Y + ++ A
Sbjct: 312 RVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSV--STALTTVYCRLNEVQFA 369
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD+ P++++ SW AMI+G +QN + AI L+ +M+ + P T SI+ AC+ L
Sbjct: 370 RQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQL 428
Query: 150 GSVCLGRQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
G++ +G+ +H +IKSE S++ AL+ MY K I++AR +F + K+V +W +M
Sbjct: 429 GALSIGKWVHG-LIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAM 487
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
I + G+ EAL F EML G P F S+ ACS+
Sbjct: 488 ITGYGLHGHGKEALKLFYEMLQSGI-PPTGVTFLSILYACSH 528
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 8/213 (3%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + L + A+ F + + P T ++SAC+ L +L +G+ VH I
Sbjct: 385 NAMISGYTQNGLTDRAISL--FQEMMPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIK 442
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + +V + +++MY KCGS+ +AR FD M +NVV+W AMI G + +A+K
Sbjct: 443 SERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALK 502
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ +MLQSG+ P TF SI+ ACS G V G ++ H + + +G ++++ M
Sbjct: 503 LFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIF-HSMANNYGFQPMSEH-YACMVD 560
Query: 183 KFDRILDARNVFSGIARKDVTS----WGSMIAA 211
R N I R + WG+++ A
Sbjct: 561 ILGRAGQLTNALEFIERMPLEPGPAVWGALLGA 593
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+L + Q+ + G+ +D+ + L + G++ R+LFN + PD+ ++ LI
Sbjct: 25 TTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLI 84
Query: 475 LGYAQFGCGDEALKLFTRMRSL-GVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENE 531
G++ G ++ L+T +R + P+ T ++A S + G LH + I++
Sbjct: 85 RGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVD-- 142
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G+ S +VDL + A + M + D V+W ++++
Sbjct: 143 -GVASNLFVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLWNTMIS 187
>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
Length = 1096
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 170/589 (28%), Positives = 289/589 (49%), Gaps = 57/589 (9%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
++P+ YA L+ C+ +S G+ VH HIL S C + LQNH++ MY KCG L+DA
Sbjct: 24 LQPARYASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAVEV 83
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F+ +P NV SWTA+I ++ + + + +M G P F F +++ ACS G++
Sbjct: 84 FELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGAL 143
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+ +H V+ + + ++ NA++ +Y K R+ +A+ VF + +++ SW ++IAA
Sbjct: 144 NEGKAIHDCVVLAGMETQVVG-NAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAAN 202
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------- 251
++ G+ +A+ F M G+ +PN+ F SV ACSN
Sbjct: 203 AQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSY 262
Query: 252 -------------------ARILFNEI---DSPDLASWNALIAGVASHSNANEAMSLFSE 289
AR++F ++ D + SW +IA A + + EA LF +
Sbjct: 263 LFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYK 322
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M +LP+ +T ++L AC TL Q ++ + + +G + + + A ++ +AK
Sbjct: 323 MDLEGVLPNKVTFVTVLRACT---TLAQCEKIFARVKHLGLELDTTLGTAFVSTFAKLGD 379
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L A VF+ LG + + VSW +I A Q F L+ RM +P+ +TF VM
Sbjct: 380 LAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DCEPNAVTFMAVMD 436
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
+C + L Q+H ++ +G DV + L+ +Y KCGS+ SA +F ++ VV+
Sbjct: 437 SCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVA 496
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+S++ +A GC + +LKL+ RM G P+ +T + VL AC V E E
Sbjct: 497 WNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQS---VSEARRYAATFE 553
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
E I + V AR G + EA+ + + + V W ++++
Sbjct: 554 LELDIAAR----NAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMIS 598
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 162/582 (27%), Positives = 274/582 (47%), Gaps = 48/582 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ AC++L + K+ + + D L ++ + K G L AR F+ +
Sbjct: 334 TFVTVLRACTTLAQCE---KIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENL 390
Query: 97 -PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
RNVVSWT MI +Q A LY +M P TF +++ +C +
Sbjct: 391 GSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DCEPNAVTFMAVMDSCLRPEDLPRA 447
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
Q+HAH++ S S ++ Q L+ MY K + A ++F + + V +W SM++AF+
Sbjct: 448 EQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASN 507
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G +L + ML G +P++ + +V AC +
Sbjct: 508 GCYERSLKLYERMLLEGT-KPDKITYLAVLDACQSVSEARRYAATFELELDIAARNAAVS 566
Query: 252 ----------ARILFNEIDSPDLA-SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
A+ F+ I + A +WNA+I+G+A H + +A+ F +M + + +
Sbjct: 567 AYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSV 626
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
T + L AC L +G Q+H+ I+ + NA++ MY KC L A+ F ++
Sbjct: 627 TYLASLEACSSLKDLTRGRQLHARILLENIH-EANLSNAVINMYGKCGSLDEAMDEFVKM 685
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
+ D +SWN++IA QH + F +M PD T+ + AC + SL +
Sbjct: 686 PER-DVISWNTMIATYAQHGSGRQALEFFKQMDLEGWTPDRATYLGAIDACGSVPSLALG 744
Query: 421 TQLHCYITKTG--LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
+H + L D V L+ +Y +CGSL A+ +F + ++V+WS+LI A
Sbjct: 745 KTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACA 804
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE-GLHLYRIMENEYGIIPT 537
Q G +EAL LF M+ G P+ +T ++ ACS G+V++ G ++ + Y + +
Sbjct: 805 QHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGGRRIFDALGRVYPVSAS 864
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH C+V++L RAG + EAE I M A +W +LLA+
Sbjct: 865 AEHYGCMVEVLGRAGKLEEAEGLIQGMPRKASGAIWMALLAA 906
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 152/615 (24%), Positives = 287/615 (46%), Gaps = 72/615 (11%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
+A+ + + ++R +T+ ++ ACS+L L G+ H+ I+ + + + N
Sbjct: 209 KDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNS 268
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVV---SWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
++NMYGKCGS++ AR+ F+KM R+V+ SWT +IA + N +A L+ +M GV
Sbjct: 269 LVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGV 328
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
+P + TF ++++AC+ L ++ A V A ++ + K + AR+
Sbjct: 329 LPNKVTFVTVLRACTTLAQC---EKIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARD 385
Query: 193 VFSGI-ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--- 248
VF + + ++V SW MI A+++ G+ A + M +PN F +V +C
Sbjct: 386 VFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM----DCEPNAVTFMAVMDSCLRP 441
Query: 249 ---------------SNF----------------------ARILFNEIDSPDLASWNALI 271
S F A +F + + +WN+++
Sbjct: 442 EDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSML 501
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
+ AS+ ++ L+ M PD +T ++L AC + Y +
Sbjct: 502 SAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDAC------QSVSEARRYAATFELE 555
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
++ NA ++ YA+C L A F + ++V+WN++I+ QH ++++ F +
Sbjct: 556 LDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECFWK 615
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M ++ + +T+ + AC+ + L QLH I + + + N ++++Y KCGS
Sbjct: 616 MELEGVRANSVTYLASLEACSSLKDLTRGRQLHARILLENI-HEANLSNAVINMYGKCGS 674
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
L A F M DV+SW+++I YAQ G G +AL+ F +M G +P+ T +G + A
Sbjct: 675 LDEAMDEFVKMPERDVISWNTMIATYAQHGSGRQALEFFKQMDLEGWTPDRATYLGAIDA 734
Query: 512 CSHVGLVEEGLHLYRI-------MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
C V + G ++ I +E + G+ + +V + AR G +H+A+ +
Sbjct: 735 CGSVPSLALGKTIHSIVATAAPCLEQDPGV------ATALVTMYARCGSLHDAKSVFWR- 787
Query: 565 ACDADIVVWKSLLAS 579
+ ++V W +L+A+
Sbjct: 788 SHSRNLVTWSNLIAA 802
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 164/335 (48%), Gaps = 27/335 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S L + +AL + + +R TY + ACSSL+ L GR++H IL
Sbjct: 594 NAMISGLAQHGESKQALECF-WKMELEGVRANSVTYLASLEACSSLKDLTRGRQLHARIL 652
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
L + L N ++NMYGKCGSL++A F KMP+R+V+SW MIA +Q+ A++
Sbjct: 653 LENIH-EANLSNAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYAQHGSGRQALE 711
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV------IKSEHGSHLIAQNA 176
+ QM G P + T+ I AC + S+ LG+ +H+ V ++ + G A
Sbjct: 712 FFKQMDLEGWTPDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPG----VATA 767
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
L+ MY + + DA++VF +++ +W ++IAA ++ G E EAL F EM G +P
Sbjct: 768 LVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGT-KP 826
Query: 237 NEFIFGSVFSACS------NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMS 285
+ F ++ +ACS + R +F+ + S + ++ + EA
Sbjct: 827 DALTFSTLVAACSRRGVVKDGGRRIFDALGRVYPVSASAEHYGCMVEVLGRAGKLEEAEG 886
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
L M + G +LL AC R L +G++
Sbjct: 887 LIQGMPRK---ASGAIWMALLAACNRRGDLERGIR 918
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 168/624 (26%), Positives = 303/624 (48%), Gaps = 58/624 (9%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
N+ +AL+ Y + + + + T++ + AC+ RSL+LG+ +H H+L S ++
Sbjct: 82 NMPIDALLFYARMRASPSPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIV 141
Query: 73 QNHILNMYGKC-------GSLED------ARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
N +LNMY C G+ D R FD M +RNVV+W MI+ + + +
Sbjct: 142 YNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIE 201
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK--SEHGSHLIAQNAL 177
A K++ M++ G+ P +F ++ A + L+ V+K S++ ++
Sbjct: 202 AFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSA 261
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
I MY + + AR +F ++ W +MI + + +EA+ F +++ + +
Sbjct: 262 IFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLD 321
Query: 238 EFIFGSVFSACSNF----------ARIL------------------------------FN 257
+ F S +A S A IL F+
Sbjct: 322 DVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFS 381
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
+ D+ +WN +++ + +E + L EM+ + + D +T+ +LL +
Sbjct: 382 NMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEI 441
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF-KELGKNADSVSWNSIIAAC 376
G Q H+Y+I+ G + ++ MYAK ++ A +F K + D +WN++IA
Sbjct: 442 GKQAHAYLIRHGIQFE-GMDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGY 500
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
Q+ +EE F +F +M+ ++P+ +T ++ AC M ++ + Q+H + + L +V
Sbjct: 501 TQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNV 560
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
FV L+D+Y K G++ A +F + V+++++IL Y Q G G+ AL LF M
Sbjct: 561 FVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGS 620
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
G+ P+ VT V +L+ACS+ GLV+EGL +++ ME EY I P+ EH CV D+L R G V E
Sbjct: 621 GIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXE 680
Query: 557 AEDFINQMACDADIV-VWKSLLAS 579
A +F+ + + + +W SLL +
Sbjct: 681 AYEFVKGLGEEGNTFRIWGSLLGA 704
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 145/531 (27%), Positives = 244/531 (45%), Gaps = 73/531 (13%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP-GQFTFGSIIKACSGLGS 151
FD +P+ V W +I G N DA+ Y +M S +TF S +KAC+ S
Sbjct: 60 FDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACAQARS 119
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK-------------FDRILDARNVFSGIA 198
+ LG+ LH HV++S GS I N+L+ MY+ F+ R VF +
Sbjct: 120 LKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMR 179
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA----------- 247
+++V +W +MI+ + K +EA F M+ G +P F +VF A
Sbjct: 180 KRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGI-RPTPVSFVNVFPAVWRMNDYDNAN 238
Query: 248 -------------------------------CSNFARILFNEIDSPDLASWNALIAGVAS 276
C +FAR +F+ + WN +I G
Sbjct: 239 VLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQ 298
Query: 277 HSNANEAMSLFSE-MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
++ EA+ LF + M + D +T S L A L G Q+H+YI+K V
Sbjct: 299 NNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVV 358
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
+ NAI+ MY++C + + VF + + D V+WN++++A +Q+ +E L M
Sbjct: 359 ILNAIIVMYSRCGSIGTSFKVFSNMLER-DVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQ 417
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG-LMDIYIKCGSLGS 454
D +T ++ + + S E+ Q H Y+ + G+ F+ M+G L+D+Y K G + +
Sbjct: 418 GFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFE--GMDGYLIDMYAKSGLITT 475
Query: 455 ARKLF--NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
A++LF N + D +W+++I GY Q G +E +F +M V PN VTL +L AC
Sbjct: 476 AQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPAC 535
Query: 513 SHVGLVEEGLHLY----RIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
+ +G + G ++ R N+ + T ++D+ +++G + AE+
Sbjct: 536 NPMGTIGLGKQIHGFAIRCFLNQNVFVGT-----ALLDMYSKSGAITYAEN 581
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 172/397 (43%), Gaps = 58/397 (14%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++A S L+ L LGR++H +IL S VV+ N I+ MY +CGS+ + F M
Sbjct: 324 TFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNM 383
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R+VV+W M++ QN +++ + L +M + G M T +++ S L S +G+
Sbjct: 384 LERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGK 443
Query: 157 QLHAHVIKSEHGSHLIAQNA-LIAMYTKFDRILDARNVF--SGIARKDVTSWGSMIAAFS 213
Q HA++I+ HG + LI MY K I A+ +F + +D +W +MIA ++
Sbjct: 444 QAHAYLIR--HGIQFEGMDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYT 501
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------ 249
+ G E F +M+ +PN S+ AC+
Sbjct: 502 QNGLSEEGFAVFRKMIEQNV-RPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNV 560
Query: 250 ----------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
+A +F E + ++ +I H A+SLF M
Sbjct: 561 FVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGS 620
Query: 294 ELLPDGLTVHSLLCACI------GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
+ PD +T ++L AC L ++Q M+ Y I+ S+ C + M +
Sbjct: 621 GIKPDSVTFVAILSACSYAGLVDEGLRIFQSME-REYKIQ---PSSEHYC-CVADMLGRV 675
Query: 348 SVLCNALLVFKELGKNADSVS-WNSIIAACLQHNQAE 383
+ A K LG+ ++ W S++ AC H + E
Sbjct: 676 GRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFE 712
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 130/249 (52%), Gaps = 5/249 (2%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS+ + L +E L+ F + T L+S S+LRS ++G++ H +++
Sbjct: 392 NTMVSAFVQNGLDDEGLMLV-FEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLI 450
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP--QRNVVSWTAMIAGCSQNYQENDA 120
Q + + ++++MY K G + A+ F+K R+ +W AMIAG +QN +
Sbjct: 451 RHGIQFEG-MDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEG 509
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
++ +M++ V P T SI+ AC+ +G++ LG+Q+H I+ ++ AL+ M
Sbjct: 510 FAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDM 569
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y+K I A NVF+ K+ ++ +MI ++ + G AL F+ ML G +P+
Sbjct: 570 YSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGI-KPDSVT 628
Query: 241 FGSVFSACS 249
F ++ SACS
Sbjct: 629 FVAILSACS 637
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 161/341 (47%), Gaps = 18/341 (5%)
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP-DGLTVHSLLCACIGRL 313
LF+ I P WN +I G ++ +A+ ++ MR D T S L AC
Sbjct: 59 LFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACAQAR 118
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL------------CNALLVFKELG 361
+L G +H ++++ F S+ V N++L MY+ C C+ + +
Sbjct: 119 SLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTM 178
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
+ + V+WN++I+ ++ + E F++F M+ I+P ++F +V A +M +
Sbjct: 179 RKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNAN 238
Query: 422 QLHCYITKTGLAF--DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
L+ + K G + D FV++ + +Y + G + AR++F+ + W+++I GY Q
Sbjct: 239 VLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQ 298
Query: 480 FGCGDEALKLFTR-MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
C EA+ LF + M S + VT + LTA S + ++ G L+ + I+
Sbjct: 299 NNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQV- 357
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++ + +R G + + + M + D+V W +++++
Sbjct: 358 VILNAIIVMYSRCGSIGTSFKVFSNM-LERDVVTWNTMVSA 397
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 15/174 (8%)
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS-QIKPDHITFNDVMGA 410
AL +F + + +V WN+II + +N + ++RM AS K D TF+ + A
Sbjct: 55 QALHLFDSIPR-PTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKA 113
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS----LGSA---------RK 457
CA+ SL++ LHC++ ++ V N L+++Y C + LG+A R+
Sbjct: 114 CAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRR 173
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+F+ M +VV+W+++I Y + EA K+F M +G+ P V+ V V A
Sbjct: 174 VFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPA 227
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 173/569 (30%), Positives = 278/569 (48%), Gaps = 52/569 (9%)
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
++ ++L D+ + + + G++ R F+K+ + ++ + +I G S N
Sbjct: 32 QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNG 91
Query: 116 QENDAIKLYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
+I LY + + + + P FT+ I A S L +G LHAH I S+L
Sbjct: 92 LPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVG 151
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG-- 232
+A++ +Y KF R AR VF + +D W +MI+ FS+ Y +++ F +ML G
Sbjct: 152 SAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLS 211
Query: 233 ------------AYQPNEFIFG-----------------------SVFSACSNF--ARIL 255
+ E+ G S++S C RIL
Sbjct: 212 FDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRIL 271
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS-LLCACIGRLT 314
F++ID PDL S+NA+I+G + A++LF RELL G V+S L I
Sbjct: 272 FDQIDQPDLISYNAMISGYTFNHETESAVTLF-----RELLASGQRVNSSTLVGLIPVYL 326
Query: 315 LYQGMQVHSYI----IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
+ +Q+ I +K+G V A+ T+Y + + + A +F E SWN
Sbjct: 327 PFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDE-SPEKSLASWN 385
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
++I+ Q+ + LF M+ Q+ P+ +T ++ ACA++ +L + +H I
Sbjct: 386 AMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSE 444
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
L +V+V L+D+Y KCGS+ AR+LF+ M + +VV+W+++I GY G G EALKLF
Sbjct: 445 RLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLF 504
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
M G+ P VT + +L ACSH GLV EG ++ M N YG P EH +C+VD+L R
Sbjct: 505 YEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGR 564
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
AG + A +FI +M + VW +LL +
Sbjct: 565 AGQLTNALEFIERMPLEPGPAVWGALLGA 593
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/450 (29%), Positives = 211/450 (46%), Gaps = 43/450 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + L ++ Y + TN+R TYA ISA S L ++G +H H +
Sbjct: 81 NVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSI 140
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ ++ + + I+++Y K E AR FD MP+R+ V W MI+G S+N D+I+
Sbjct: 141 VDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIR 200
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+++ ML G+ T +++ A + L LG + K S + LI++Y+
Sbjct: 201 VFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYS 260
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE-ALCHFNEMLHHGAYQPNEFIF 241
K + R +F I + D+ S+ +MI+ ++ +E E A+ F E+L G + +
Sbjct: 261 KCGKSCKGRILFDQIDQPDLISYNAMISGYT-FNHETESAVTLFRELLASGQRVNSSTLV 319
Query: 242 G------------------------------SVFSACSN---------FARILFNEIDSP 262
G SV +A + FAR LF+E
Sbjct: 320 GLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEK 379
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
LASWNA+I+G + + A+SLF EM +L P+ +TV S+L AC L G VH
Sbjct: 380 SLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVH 438
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
I +SNV V A++ MYAKC + A +F +L + + V+WN++I H
Sbjct: 439 GLIKSERLESNVYVSTALVDMYAKCGSIVEARQLF-DLMVDKNVVTWNAMITGYGLHGHG 497
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACA 412
+E +LF ML S I P +TF ++ AC+
Sbjct: 498 KEALKLFYEMLQSGIPPTGVTFLSILYACS 527
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 172/410 (41%), Gaps = 45/410 (10%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T A +++A + L+ +LG + DV + ++++Y KCG R+ FD+
Sbjct: 215 TTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQ 274
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ Q +++S+ AMI+G + N++ A+ L+ ++L SG T +I + L
Sbjct: 275 IDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLS 334
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R + +K AL +Y + + + AR +F K + SW +MI+ +++
Sbjct: 335 RLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQN 394
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G A+ F EM+ PN S+ SAC+
Sbjct: 395 GLTDRAISLFQEMMPQ--LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYV 452
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR LF+ + ++ +WNA+I G H + EA+ LF EM +
Sbjct: 453 STALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGI 512
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
P G+T S+L AC + +G ++ HS GF ++ + + L NAL
Sbjct: 513 PPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNAL 572
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
+ + W +++ AC+ H E R+ Q+ P+++ +
Sbjct: 573 EFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLF--QLDPENVGY 620
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 118/222 (53%), Gaps = 8/222 (3%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKC--QPDVVLQNHILNMYGKCGSLEDA 89
R+ ST GLI LQL R + + L QP V + +Y + ++ A
Sbjct: 312 RVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSV--STALTTVYCRLNEVQFA 369
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD+ P++++ SW AMI+G +QN + AI L+ +M+ + P T SI+ AC+ L
Sbjct: 370 RQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQL 428
Query: 150 GSVCLGRQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
G++ +G+ +H +IKSE S++ AL+ MY K I++AR +F + K+V +W +M
Sbjct: 429 GALSIGKWVHG-LIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAM 487
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
I + G+ EAL F EML G P F S+ ACS+
Sbjct: 488 ITGYGLHGHGKEALKLFYEMLQSGI-PPTGVTFLSILYACSH 528
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 8/213 (3%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + L + A+ F + + P T ++SAC+ L +L +G+ VH I
Sbjct: 385 NAMISGYTQNGLTDRAISL--FQEMMPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIK 442
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + +V + +++MY KCGS+ +AR FD M +NVV+W AMI G + +A+K
Sbjct: 443 SERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALK 502
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ +MLQSG+ P TF SI+ ACS G V G ++ H + + +G ++++ M
Sbjct: 503 LFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIF-HSMANNYGFQPMSEH-YACMVD 560
Query: 183 KFDRILDARNVFSGIARKDVTS----WGSMIAA 211
R N I R + WG+++ A
Sbjct: 561 ILGRAGQLTNALEFIERMPLEPGPAVWGALLGA 593
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+L + Q+ + G+ +D+ + L + G++ R+LFN + PD+ ++ LI
Sbjct: 25 TTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLI 84
Query: 475 LGYAQFGCGDEALKLFTRMR-SLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENE 531
G++ G ++ L+T +R + P+ T ++A S + G LH + I++
Sbjct: 85 RGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVD-- 142
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G+ S +VDL + A + M + D V+W ++++
Sbjct: 143 -GVASNLFVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLWNTMIS 187
>gi|302783519|ref|XP_002973532.1| hypothetical protein SELMODRAFT_99677 [Selaginella moellendorffii]
gi|300158570|gb|EFJ25192.1| hypothetical protein SELMODRAFT_99677 [Selaginella moellendorffii]
Length = 547
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 164/539 (30%), Positives = 268/539 (49%), Gaps = 69/539 (12%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+ YA + AC+ L++L LGR+VH I S + ++ L NH++NMY KCGSL +AR FDK
Sbjct: 25 ANYAQALHACTKLKALDLGRQVHLEIQRSGLEENLQLGNHVINMYAKCGSLAEARAFFDK 84
Query: 96 M--PQRNVVSWTAMIAGCSQN-YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
+ +RNV +WTA+++ +Q + + A+ L+ +M GV P TF +++AC +
Sbjct: 85 LSPERRNVFTWTAVMSAYAQTGHCKETALHLFHRMQLEGVRPNLITFAVVLEACDSSRFL 144
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
R LH +++ + L+ Y + DAR F G+ K + SW +MI A+
Sbjct: 145 DDARLLHRLAMENGFDGDSVVGTILVRTYVLCKSLDDARRTFDGLKLKSLVSWTAMIQAY 204
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
++ G + EA + M G QP+ + + C D P
Sbjct: 205 AEKGLDKEAFYLYRGMRQEG-LQPDRVSYLLMLGTC-----------DRP---------- 242
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
E L G +HS L A GF
Sbjct: 243 ---------------------EKLEVGKRIHSELAAG-------------------GFQR 262
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNA-DSVSWNSIIAACLQHNQAEELFRLFSR 391
+ V A++TMY +C L + VF + ++ D +SWN+++ A Q+ +E F LF +
Sbjct: 263 DTAVQIALVTMYGRCGDLEASASVFSTIERSCDDEISWNAMLGAYGQNGHPDEAFALFRK 322
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
+ +KP +F ++G C + L LH I ++GL + + L+ Y KCG
Sbjct: 323 FMLLGLKPSRPSFLTILGLCER---LHTARTLHENIVESGLEHEFTIQTALISCYGKCGG 379
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
L A+K+F+ ME+ DVVSW+ ++ +A++G G EAL LF +M+ G PN ++ +L+A
Sbjct: 380 LDDAKKIFDGMEDHDVVSWTGIVETHARYGRGGEALLLFYKMQQDGSRPNNISFTCILSA 439
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
CSH GLV EG L+ + ++G++P+ + C+VDLL RAG + AE ++++A D ++
Sbjct: 440 CSHAGLVREGCQLFESLVRDHGLVPSELNFGCLVDLLGRAGRLDLAEGCLSRVALDRNL 498
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 150/336 (44%), Gaps = 42/336 (12%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP+ T+A ++ AC S R L R +H + + D V+ ++ Y C SL+DAR
Sbjct: 124 VRPNLITFAVVLEACDSSRFLDDARLLHRLAMENGFDGDSVVGTILVRTYVLCKSLDDAR 183
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD + +++VSWTAMI ++ + +A LY M Q G+ P + ++ ++ C
Sbjct: 184 RTFDGLKLKSLVSWTAMIQAYAEKGLDKEAFYLYRGMRQEGLQPDRVSYLLMLGTCDRPE 243
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR--KDVTSWGSM 208
+ +G+++H+ + Q AL+ MY + + + +VFS I R D SW +M
Sbjct: 244 KLEVGKRIHSELAAGGFQRDTAVQIALVTMYGRCGDLEASASVFSTIERSCDDEISWNAM 303
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------- 251
+ A+ + G+ EA F + + G +P+ F ++ C
Sbjct: 304 LGAYGQNGHPDEAFALFRKFMLLG-LKPSRPSFLTILGLCERLHTARTLHENIVESGLEH 362
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
A+ +F+ ++ D+ SW ++ A + EA+ LF +M+
Sbjct: 363 EFTIQTALISCYGKCGGLDDAKKIFDGMEDHDVVSWTGIVETHARYGRGGEALLLFYKMQ 422
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
P+ ++ +L AC + +G Q+ +++
Sbjct: 423 QDGSRPNNISFTCILSACSHAGLVREGCQLFESLVR 458
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 89/158 (56%), Gaps = 10/158 (6%)
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA 455
++ + + + AC K+ +L++ Q+H I ++GL ++ + N ++++Y KCGSL A
Sbjct: 19 KLSRNEANYAQALHACTKLKALDLGRQVHLEIQRSGLEENLQLGNHVINMYAKCGSLAEA 78
Query: 456 RKLFNFM--ENPDVVSWSSLILGYAQFG-CGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
R F+ + E +V +W++++ YAQ G C + AL LF RM+ GV PNL+T VL AC
Sbjct: 79 RAFFDKLSPERRNVFTWTAVMSAYAQTGHCKETALHLFHRMQLEGVRPNLITFAVVLEAC 138
Query: 513 SHVGLVEEGLHLYRI-MENEY------GIIPTREHCSC 543
+++ L+R+ MEN + G I R + C
Sbjct: 139 DSSRFLDDARLLHRLAMENGFDGDSVVGTILVRTYVLC 176
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 34 RPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
RPS + ++ C L + R +H++I+ S + + +Q +++ YGKCG L+DA+ F
Sbjct: 332 RPS-FLTILGLCERLHT---ARTLHENIVESGLEHEFTIQTALISCYGKCGGLDDAKKIF 387
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
D M +VVSWT ++ ++ + +A+ L+ +M Q G P +F I+ ACS G V
Sbjct: 388 DGMEDHDVVSWTGIVETHARYGRGGEALLLFYKMQQDGSRPNNISFTCILSACSHAGLVR 447
Query: 154 LGRQLHAHVIKSEHG 168
G QL +++ +HG
Sbjct: 448 EGCQLFESLVR-DHG 461
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 164/551 (29%), Positives = 271/551 (49%), Gaps = 57/551 (10%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N IL+ Y G L A+ F P RN +WT M+ + + +DA+ L+ ML GV+
Sbjct: 78 NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 137
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P + T +++ C LH IK +H+ N L+ Y K + AR V
Sbjct: 138 PDRVTVTTVLNLPG-----CTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 192
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA- 252
F + KD ++ +M+ SK G +AL F M G F F S+ + + A
Sbjct: 193 FLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAG-IPATHFTFSSILTVAAGMAH 251
Query: 253 ---------------------------------------RILFNEIDSPDLASWNALIAG 273
R LF+E+ D S+N +IA
Sbjct: 252 LLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAA 311
Query: 274 VASHSNANEAMSLFSEMR----DRELLPDGLTVHSLLCACIGRLT-LYQGMQVHSYIIKM 328
A + A + LF EM+ DR++LP ++ + + G L ++ G Q+H+ ++ +
Sbjct: 312 YAWNQCAATVLRLFREMQKLGFDRQVLP-----YATMLSVAGSLPDVHIGKQIHAQLVLL 366
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
G S + NA++ MY+KC +L A F + + ++SW ++I +Q+ Q EE +L
Sbjct: 367 GLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKS-AISWTALITGYVQNGQHEEALQL 425
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
FS M + ++PD TF+ ++ A + +A + + QLH Y+ ++G VF + L+D+Y K
Sbjct: 426 FSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAK 485
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
CG L A + F+ M + +SW+++I YA +G A+K+F M G +P+ VT + V
Sbjct: 486 CGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSV 545
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
L ACSH GL +E + + +M+++Y I P +EH +CV+D L R GC + + + +M A
Sbjct: 546 LAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKA 605
Query: 569 DIVVWKSLLAS 579
D ++W S+L S
Sbjct: 606 DPIIWTSILHS 616
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 160/304 (52%), Gaps = 29/304 (9%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
YA ++S SL + +G+++H ++L + +L N +++MY KCG L+ A+ F
Sbjct: 340 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 399
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+++ +SWTA+I G QN Q +A++L+ M ++G+ P + TF SIIKA S L + LGRQ
Sbjct: 400 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 459
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
LH+++I+S + S + + + L+ MY K + +A F + ++ SW ++I+A++ G
Sbjct: 460 LHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGE 519
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASH 277
A+ F MLH G + P+ F SV +ACS+ N L
Sbjct: 520 AKNAIKMFEGMLHCG-FNPDSVTFLSVLAACSH-----------------NGL------- 554
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
A+E M F M+ + + ++ + +GR+ + QV +++M F ++ +
Sbjct: 555 --ADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFS--QVQKMLVEMPFKADPIIW 610
Query: 338 NAIL 341
+IL
Sbjct: 611 TSIL 614
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 167/342 (48%), Gaps = 15/342 (4%)
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKL--GYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
LDAR V +G DV ++ + S L G+ A F++M H + N + S +
Sbjct: 30 LDARMVKTGF---DVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLIL--SAY 84
Query: 246 SACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
S+ + A+ LF + +W ++ A+ ++A+SLF M ++PD +TV
Sbjct: 85 SSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVT 144
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
++L L +H + IK G D++V VCN +L Y K +L A VF E+ +
Sbjct: 145 TVL-----NLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEM-HD 198
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
D+V++N+++ C + + +LF+ M + I H TF+ ++ A MA L + Q+
Sbjct: 199 KDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQV 258
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H + ++ +VFV N L+D Y KC L R+LF+ M D VS++ +I YA C
Sbjct: 259 HALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCA 318
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
L+LF M+ LG ++ +L+ + V G ++
Sbjct: 319 ATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIH 360
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 181/418 (43%), Gaps = 51/418 (12%)
Query: 11 KQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
K+ L+ +AL + + I T++ +++ + + L LG +VH +L S +V
Sbjct: 213 KEGLHTQALQLFA-AMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNV 271
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ N +L+ Y KC L+D R FD+MP+R+ VS+ +IA + N ++L+ +M +
Sbjct: 272 FVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKL 331
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G + +++ L V +G+Q+HA ++ S + NALI MY+K + A
Sbjct: 332 GFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAA 391
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
++ FS + K SW ++I + + G EAL F++M G +P+ F S+ A S+
Sbjct: 392 KSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG-LRPDRATFSSIIKASSS 450
Query: 251 FARI----------------------------------------LFNEIDSPDLASWNAL 270
A I F+E+ + SWNA+
Sbjct: 451 LAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAV 510
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC-----IGRLTLYQGMQVHSYI 325
I+ A + A A+ +F M PD +T S+L AC Y + H Y
Sbjct: 511 ISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYS 570
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
I + V + + + C +LV E+ AD + W SI+ +C H E
Sbjct: 571 ISPWKEHYACVIDTLGRV--GCFSQVQKMLV--EMPFKADPIIWTSILHSCRIHGNQE 624
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/513 (29%), Positives = 263/513 (51%), Gaps = 47/513 (9%)
Query: 107 MIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE 166
MIA C + + A++L+ +M + G++ +F S++ AC+ L ++ GR+LH H+I +
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
+ + + AL+ MY K + DA+ VF G+ KD+ +W S+IAA+++ G A+ +
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120
Query: 227 EMLHHGAYQPNEFIFGSVFSACSNFA---------------------------------- 252
M+ G +PN F C++ A
Sbjct: 121 RMIAEGV-EPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKC 179
Query: 253 ------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL-PDGLTVHSL 305
R +F + + ++ S+ A+I+ EA+ LFS M E + P+ T ++
Sbjct: 180 DEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATI 239
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
L A G L +G +VH ++ GFD+NV V NA++TMY KC A VF + +
Sbjct: 240 LGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTAR-N 298
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
+SW S+IAA QH +E LF RM ++P ++F+ + ACA + +L+ ++H
Sbjct: 299 VISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHH 355
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
+ + LA + L+ +Y +CGSL AR++FN M+ D S +++I + Q G +
Sbjct: 356 RVVEANLA-SPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQ 414
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
AL+++ +M G+ + +T V VL ACSH LV + + + ++G++P EH C+V
Sbjct: 415 ALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMV 474
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
D+L R+G + +AE+ + M AD V W +LL+
Sbjct: 475 DVLGRSGRLGDAEELVETMPYQADAVAWMTLLS 507
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 255/504 (50%), Gaps = 47/504 (9%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L++AC+ L++L+ GR++H+H++++ + D+ L+ +L MY KCGSL+DA+ F+ M ++
Sbjct: 36 LVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKD 95
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+ +W+++IA ++ + A+ LY +M+ GV P TF + C+ + + GR +H
Sbjct: 96 LFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQ 155
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
++ S+ + Q++L+ MY K D +++AR VF G+ ++V S+ +MI+A+ + G E
Sbjct: 156 RILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAE 215
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------------- 251
AL F+ M A +PN + F ++ A
Sbjct: 216 ALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALV 275
Query: 252 -----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
AR +F+ + + ++ SW ++IA A H N EA++LF M ++ P G+
Sbjct: 276 TMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGV 332
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
+ S L AC L +G ++H +++ S + ++L+MYA+C L +A VF +
Sbjct: 333 SFSSALNACALLGALDEGREIHHRVVEANLASP-QMETSLLSMYARCGSLDDARRVFNRM 391
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
K D+ S N++IAA QH + ++ R++ +M I D ITF V+ AC+ + +
Sbjct: 392 -KTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADC 450
Query: 421 TQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYA 478
L + G+ V ++D+ + G LG A +L M D V+W +L+ G
Sbjct: 451 RDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCK 510
Query: 479 QFGCGDEALKLFTRMRSLGVSPNL 502
+ G D + ++ L + L
Sbjct: 511 RHGDLDRGERAARKVFELAPAETL 534
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 193/385 (50%), Gaps = 45/385 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+A + C+S+ L GR +H IL SK D VLQ+ +LNMY KC + +AR F+ M
Sbjct: 133 TFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGM 192
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVCLG 155
RNV S+TAMI+ Q + +A++L+ +M + + P +TF +I+ A GLG++ G
Sbjct: 193 KARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKG 252
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R++H H+ ++++ QNAL+ MY K ++AR VF + ++V SW SMIAA+++
Sbjct: 253 RKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQH 312
Query: 216 GYELEALCHFNEM---------------------------LHHGAYQPN------EFIFG 242
G EAL F M +HH + N E
Sbjct: 313 GNPQEALNLFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEANLASPQMETSLL 372
Query: 243 SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
S+++ C + AR +FN + + D S NA+IA H +A+ ++ +M + DG+
Sbjct: 373 SMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGI 432
Query: 301 TVHSLLCACIGRLTLYQGMQ--VHSYIIKMGFDSNVPVCNAILTMY---AKCSVLCNALL 355
T S+L AC +L + + S ++ G VP+ L M + L +A
Sbjct: 433 TFVSVLVAC-SHTSLVADCRDFLQSLVMDHGV---VPLVEHYLCMVDVLGRSGRLGDAEE 488
Query: 356 VFKELGKNADSVSWNSIIAACLQHN 380
+ + + AD+V+W ++++ C +H
Sbjct: 489 LVETMPYQADAVAWMTLLSGCKRHG 513
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 168/311 (54%), Gaps = 4/311 (1%)
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
+IA +A+ L+ EM +R ++ D V SL+ AC L +G ++H ++I G
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
F +++P+ A+L MYAKC L +A VF+ + + D +W+SIIAA + + E L+
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGM-EIKDLFAWSSIIAAYARAGRGEMAVVLY 119
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
RM+A ++P+ +TF +G CA +A L +H I + + D + + L+++Y+KC
Sbjct: 120 RRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKC 179
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL-GVSPNLVTLVGV 508
+ ARK+F M+ +V S++++I Y Q G EAL+LF+RM + + PN T +
Sbjct: 180 DEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATI 239
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
L A +G +E+G ++R + + G + +V + + G EA + M
Sbjct: 240 LGAVEGLGNLEKGRKVHRHLASR-GFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTA-R 297
Query: 569 DIVVWKSLLAS 579
+++ W S++A+
Sbjct: 298 NVISWTSMIAA 308
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 137/245 (55%), Gaps = 5/245 (2%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S+ + + EAL + I T+A ++ A L +L+ GRKVH H+
Sbjct: 204 ISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRG 263
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+VV+QN ++ MYGKCGS +AR FD M RNV+SWT+MIA +Q+ +A+ L+
Sbjct: 264 FDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFK 323
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M V P +F S + AC+ LG++ GR++H V+++ S + + +L++MY +
Sbjct: 324 RM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEANLASPQM-ETSLLSMYARCG 379
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ DAR VF+ + +D S +MIAAF++ G + +AL + +M G + F SV
Sbjct: 380 SLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEG-IPADGITFVSVL 438
Query: 246 SACSN 250
ACS+
Sbjct: 439 VACSH 443
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 239/451 (52%), Gaps = 43/451 (9%)
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G+ P + F S+++A + L + LHA VI+ L NAL+ MY+KF
Sbjct: 71 GISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHP---- 126
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
L L F + H+ + +S +
Sbjct: 127 ---------------------------HLSPLHEFPQARHN---------HNNKYSVKID 150
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
R LF+ + D+ SWN +IAG A + EA+++ EM L PD T+ S+L
Sbjct: 151 SVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFT 210
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
+ +G ++H Y I+ GFD +V + ++++ MYAKC+ + ++ F L N D++SWN
Sbjct: 211 EHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLS-NRDAISWN 269
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
SIIA C+Q+ + ++ F RML ++KP ++F+ V+ ACA + +L + QLH YI +
Sbjct: 270 SIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRL 329
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME--NPDVVSWSSLILGYAQFGCGDEALK 488
G + F+ + L+D+Y KCG++ AR +FN +E + D+VSW+++I+G A G +A+
Sbjct: 330 GFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVS 389
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLL 548
LF M GV P V + VLTACSH GLV+EG + M+ ++G+ P EH + V DLL
Sbjct: 390 LFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLL 449
Query: 549 ARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
RAG + EA DFI+ M + VW +LLA+
Sbjct: 450 GRAGRLEEAYDFISNMGEEPTGSVWSTLLAA 480
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 156/319 (48%), Gaps = 17/319 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + +Y EAL N+R T + ++ + ++ G+++H + +
Sbjct: 168 NTVIAGNAQNGMYEEALNMVK-EMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAI 226
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
DV + + +++MY KC +E + F + R+ +SW ++IAGC QN + + +
Sbjct: 227 RHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLG 286
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ +ML+ V P Q +F S+I AC+ L ++ LG+QLHA++I+ + ++L+ MY
Sbjct: 287 FFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYA 346
Query: 183 KFDRILDARNVFSGIA--RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
K I AR +F+ I +D+ SW ++I + G+ L+A+ F EML G +P
Sbjct: 347 KCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGV-KPCYVA 405
Query: 241 FGSVFSACSNFARI-----LFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEM 290
F +V +ACS+ + FN + +P L + A+ + EA S M
Sbjct: 406 FMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNM 465
Query: 291 RDRELLPDGLTVHSLLCAC 309
+ P G +LL AC
Sbjct: 466 GEE---PTGSVWSTLLAAC 481
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/464 (22%), Positives = 192/464 (41%), Gaps = 75/464 (16%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGK--------------- 82
+ L+ A + + L + +H ++ D+ N ++NMY K
Sbjct: 79 FPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQAR 138
Query: 83 -------CGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
++ R FD+MP R+VVSW +IAG +QN +A+ + +M + + P
Sbjct: 139 HNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPD 198
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
FT SI+ + +V G+++H + I+ + ++LI MY K ++ + F
Sbjct: 199 SFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFH 258
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---- 251
++ +D SW S+IA + G + L F ML +P + F SV AC++
Sbjct: 259 LLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKV-KPMQVSFSSVIPACAHLTALN 317
Query: 252 ------------------------------------ARILFNEID--SPDLASWNALIAG 273
AR +FN+I+ D+ SW A+I G
Sbjct: 318 LGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMG 377
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDS 332
A H +A +A+SLF EM + P + ++L AC + +G + + + + G
Sbjct: 378 CAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAP 437
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
+ A+ + + L A +G+ W++++AAC H E ++ +++
Sbjct: 438 GLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKI 497
Query: 393 LASQIKPD----HITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
L + P H+ +++ A + +L + KTGL
Sbjct: 498 LL--VDPGNMGAHVIMSNIYSAAQRWRD---AAKLRVRMRKTGL 536
>gi|224121748|ref|XP_002330643.1| predicted protein [Populus trichocarpa]
gi|222872247|gb|EEF09378.1| predicted protein [Populus trichocarpa]
Length = 777
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 178/602 (29%), Positives = 304/602 (50%), Gaps = 52/602 (8%)
Query: 28 NTNIRIRPS--TYAGLISA-CSSLRS-LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
++ + ++P+ T+ LI+A CSS+ S L L ++ I S ++ + + + + +
Sbjct: 140 DSGLSLKPNEYTFGSLITAACSSVDSGLSLLGQILARIKKSGLLANLYVGSALAGGFSRL 199
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
GS + AR F++M RN VS ++ G + +A++++ + + V ++ ++
Sbjct: 200 GSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEVFKET-RHLVDINVDSYVILL 258
Query: 144 KACSGLGSV----CLGRQLHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
AC+ + GR++H + I++ + + + N LI MY K I AR+VF +
Sbjct: 259 SACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMV 318
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL--- 255
KD SW SMI + +A+ +N M G P+ F S S+C++ IL
Sbjct: 319 DKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTG-LMPSNFTLISALSSCASLGCILLGQ 377
Query: 256 -------------------------------------FNEIDSPDLASWNALIAGVA-SH 277
F+ + D SWN +I +A S
Sbjct: 378 QTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWMLERDQVSWNTVIGALADSG 437
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
++ +EA+ +F EM P+ +T +LL T Q+H+ I+K + +
Sbjct: 438 ASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIE 497
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
NA+L Y K + N +F + + D VSWNS+I+ + ++ + L M+
Sbjct: 498 NALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNDLLCKAMDLVWLMMQRGQ 557
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
+ D TF V+ ACA +A+LE ++H + L DV + + L+D+Y KCG + A +
Sbjct: 558 RLDCFTFATVLSACATVATLERGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASR 617
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
FN M ++ SW+S+I GYA+ G GD AL+LFTRM+ G P+ +T VGVL+ACSH+GL
Sbjct: 618 FFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGL 677
Query: 518 VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
V+EG ++ M YG++P EH SC+VDLL RAG + + ++FIN+M +I++W+++L
Sbjct: 678 VDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIDNFINKMPIKPNILIWRTVL 737
Query: 578 AS 579
+
Sbjct: 738 GA 739
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 150/538 (27%), Positives = 260/538 (48%), Gaps = 59/538 (10%)
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC--SGLGSVC 153
MP RN V+W +I+G +QN +DA + +M+ G +P +F FGS I+AC S L +
Sbjct: 1 MPDRNGVTWACLISGYTQNGMPDDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLCGLQ 60
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD-ARNVFSGIARKDVTSWGSMIAAF 212
LG Q+H ++KS + + N LI+MY K+ +D AR+VF I ++ W S+++ +
Sbjct: 61 LGMQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVY 120
Query: 213 SKLGYELEALCHFN--EMLHHG-AYQPNEFIFGSVFSA-CS------------------- 249
S+ G F+ +M G + +PNE+ FGS+ +A CS
Sbjct: 121 SQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGLSLLGQILARIKKS 180
Query: 250 ----------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
++AR +F ++ + + S N L+ G+ EA+ +F
Sbjct: 181 GLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEVF 240
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLY-----QGMQVHSYIIKMGF-DSNVPVCNAIL 341
E R L+ + + +L + L +G +VH Y I+ G D+ V V N ++
Sbjct: 241 KETR--HLVDINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLI 298
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
MYAKC + +A VF L + DSVSWNS+I Q+ E+ + ++ M + + P +
Sbjct: 299 NMYAKCGDIDHARSVFG-LMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSN 357
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
T + +CA + + + Q H K GL DV V N L+ +Y + G L +K+F++
Sbjct: 358 FTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSW 417
Query: 462 MENPDVVSWSSLILGYAQFGCG-DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
M D VSW+++I A G EA+++F M G SPN VT + +L S + +
Sbjct: 418 MLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKL 477
Query: 521 GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++ ++ +Y + + ++ ++G + E+ ++M+ D V W S+++
Sbjct: 478 SHQIHALIL-KYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMIS 534
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 146/521 (28%), Positives = 244/521 (46%), Gaps = 53/521 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSL----QLGRKVH 58
N + L +Q EA+ + +++ +I + +Y L+SAC+ L + GR+VH
Sbjct: 221 NGLMVGLVRQKCGEEAVEVFKETRHLVDINV--DSYVILLSACAEFALLDEGRRKGREVH 278
Query: 59 DHILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQE 117
+ + + V + N ++NMY KCG ++ AR F M ++ VSW +MI G QN
Sbjct: 279 GYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCF 338
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
DA+K Y M ++G+MP FT S + +C+ LG + LG+Q H IK + N L
Sbjct: 339 EDAVKSYNSMRKTGLMPSNFTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTL 398
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL-EALCHFNEMLHHGAYQP 236
+A+Y + + + + VFS + +D SW ++I A + G + EA+ F EM+ G + P
Sbjct: 399 LALYAETGHLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAG-WSP 457
Query: 237 NEFIFGSVFSACS-----------------------------------------NFARIL 255
N F ++ + S N I
Sbjct: 458 NRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIF 517
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
+ D SWN++I+G + +AM L M R D T ++L AC TL
Sbjct: 518 SRMSERRDEVSWNSMISGYIHNDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATL 577
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
+GM+VH+ I+ +S+V + +A++ MY+KC + A F L + SWNS+I+
Sbjct: 578 ERGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFN-LMPMRNLYSWNSMISG 636
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAF 434
+H + RLF+RM S PDHITF V+ AC+ + ++ + +T+ GL
Sbjct: 637 YARHGYGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVP 696
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
V + ++D+ + G L N M P+++ W +++
Sbjct: 697 RVEHYSCMVDLLGRAGELDKIDNFINKMPIKPNILIWRTVL 737
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 158/602 (26%), Positives = 274/602 (45%), Gaps = 71/602 (11%)
Query: 38 YAGLISAC--SSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGK-CGSLEDARMGFD 94
+ I AC S L LQLG ++H IL S D L N +++MYGK G ++ AR FD
Sbjct: 44 FGSAIRACQESMLCGLQLGMQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFD 103
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLY--IQMLQSG--VMPGQFTFGSIIK-ACSGL 149
++ RN + W ++++ SQ +L+ +QM SG + P ++TFGS+I ACS +
Sbjct: 104 EIEIRNSIYWNSIVSVYSQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSV 163
Query: 150 GS-VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
S + L Q+ A + KS ++L +AL +++ AR +F + ++ S +
Sbjct: 164 DSGLSLLGQILARIKKSGLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGL 223
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------- 251
+ + EA+ F E H + ++ + SAC+ F
Sbjct: 224 MVGLVRQKCGEEAVEVFKETRHLVDINVDSYVI--LLSACAEFALLDEGRRKGREVHGYA 281
Query: 252 ----------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEA 283
AR +F + D SWN++I G+ + +A
Sbjct: 282 IRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDA 341
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
+ ++ MR L+P T+ S L +C + G Q H IK+G D +V V N +L +
Sbjct: 342 VKSYNSMRKTGLMPSNFTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLAL 401
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA-EELFRLFSRMLASQIKPDHI 402
YA+ L VF + + D VSWN++I A + E +F M+ + P+ +
Sbjct: 402 YAETGHLAECQKVFSWMLER-DQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRV 460
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
TF +++ + +++ ++ Q+H I K + D + N L+ Y K G + + ++F+ M
Sbjct: 461 TFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRM 520
Query: 463 -ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
E D VSW+S+I GY +A+ L M G + T VL+AC+ V +E G
Sbjct: 521 SERRDEVSWNSMISGYIHNDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERG 580
Query: 522 LHLY-----RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
+ ++ +E++ I S +VD+ ++ G + A F N M ++ W S+
Sbjct: 581 MEVHACAIRACLESDVVI------GSALVDMYSKCGRIDYASRFFNLMPM-RNLYSWNSM 633
Query: 577 LA 578
++
Sbjct: 634 IS 635
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 172/586 (29%), Positives = 274/586 (46%), Gaps = 58/586 (9%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVL------QNHILNMYGKCGSLEDARMGFD 94
L+ +C +L SL R +H +L P +L + +L+ Y G L ARM FD
Sbjct: 68 LLPSCGTLLSL---RVLHARLL---THPQGLLLGSLRARTKLLSCYAALGDLASARMVFD 121
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP---GQFTFGSIIKACSGLGS 151
P+ + S+ AM+ Q + DA+ L+ M + P F +KAC
Sbjct: 122 GTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPEAQDDFVLSLALKACIRSAE 181
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
GR LH IK G+ N+L+ MY K + + AR VF I ++V SW SMI+
Sbjct: 182 YSYGRSLHCDAIKVG-GADGFVMNSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISG 240
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------------- 249
+ G+ + L FN+M P+E+ +V +ACS
Sbjct: 241 CVQNGFASDGLLLFNKMRQDNV-PPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMS 299
Query: 250 ------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
+ AR +F+E+ DL W +I G + N +A+ LF + R
Sbjct: 300 NSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKR 359
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ P+ +T ++L A L G +H +K+G V NA++ MYAKC +
Sbjct: 360 FANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVS 419
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A +F + N D V+WNS+I+ ++N ++ LF +M PD I+ + + A
Sbjct: 420 EADRIFGRI-SNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSAS 478
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ L + +H Y K +++V L+++Y KCG L SAR++F+ M + + V+W
Sbjct: 479 VCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWC 538
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
++I GY G ++ LF M GV PN + +L+ CSH G+V G + M
Sbjct: 539 AMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQH 598
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ I P+ +H +C+VD+LARAG + +A +FI+ M AD VW + L
Sbjct: 599 FNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVWGAFL 644
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 200/449 (44%), Gaps = 71/449 (15%)
Query: 8 SLCKQNLY-NEALVAYD-FSQNNTNIRIRPSTY--AGLISACSSLRSLQLGRKVHDHILL 63
S C QN + ++ L+ ++ Q+N + PS Y A +I+ACS+L L GR +H ++
Sbjct: 239 SGCVQNGFASDGLLLFNKMRQDN----VPPSEYTIATVITACSALFGLHQGRWMHGSVIK 294
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
+ + +L+MY KCG L+ AR FD++ ++V WT MI G +QN DA++L
Sbjct: 295 QGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRL 354
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
++ + + P T +++ A + L + LG+ +H +K + + NAL+ MY K
Sbjct: 355 FLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAK 414
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG----------- 232
+ +A +F I+ KDV +W SMI+ +++ +AL F +M G
Sbjct: 415 CQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNA 474
Query: 233 -----------------------AYQPNEFI---FGSVFSACSNF--ARILFNEIDSPDL 264
A+ N ++ ++++ C + AR +F+E++ +
Sbjct: 475 LSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNS 534
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
+W A+I G ++ ++ LF EM + P+ + S+L C HS
Sbjct: 535 VTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTC-----------SHSG 583
Query: 325 IIKMG---FDSNVPVCNAILTM---------YAKCSVLCNALLVFKELGKNADSVSWNSI 372
++ G FDS N +M A+ L +AL + AD+ W +
Sbjct: 584 MVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVWGAF 643
Query: 373 IAACLQHNQAEELFRLFSRMLASQI-KPD 400
+ C H++ + RM+ +PD
Sbjct: 644 LHGCELHSRLQFAEEAIKRMMVLHPERPD 672
>gi|115444451|ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
gi|113535536|dbj|BAF07919.1| Os02g0167200, partial [Oryza sativa Japonica Group]
Length = 526
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 136/417 (32%), Positives = 233/417 (55%), Gaps = 7/417 (1%)
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
GS N+LI MYTK + +A VF + + SW +I F + G +A+
Sbjct: 5 GSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAV-EVLS 63
Query: 228 MLHHGAYQPNEFIFGSVFSAC-----SNFARILFNEIDSPDLASWNALIAGVASHSNANE 282
++ ++PNE + ++ ++C + AR +F++I P + +WN L++G +
Sbjct: 64 LMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQD 123
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
+ LF M+ + + PD T+ +L +C L G QVHS ++ +++ V + ++
Sbjct: 124 TIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVD 183
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
MY+KC + A +F ++ + D V WNSII+ H+ +E F F +M + I P
Sbjct: 184 MYSKCGQIGIARSIFNKMTER-DVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTES 242
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
++ ++ +C++++S+ Q+H + K G +V+V + L+D+Y KCG++ AR F+ M
Sbjct: 243 SYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTM 302
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
++V+W+ +I GYAQ G GD+A++LF M + P+ VT + VLT CSH GLV++ +
Sbjct: 303 MMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAM 362
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ MEN YGIIP EH +C++D L RAG E E I++M C D ++W+ LLA+
Sbjct: 363 AFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAA 419
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 179/353 (50%), Gaps = 25/353 (7%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N +++MY KC +++A F+ +P +VSW +I G Q A+++ M ++G
Sbjct: 12 NSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFE 71
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P + T+ +++ +C V R + + + + N L++ Y + ++ D +
Sbjct: 72 PNEVTYSNLLASCIKARDVHSARAMFDKISRPS----VTTWNTLLSGYCQEEQHQDTIEL 127
Query: 194 FSGIARKDV----TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ---PNEFIFGS--- 243
F + ++V T+ ++++ SKLG + F +H + + N+ S
Sbjct: 128 FRRMQHQNVQPDRTTLAVILSSCSKLG-----ILDFGRQVHSASVRFLLHNDMFVASGLV 182
Query: 244 -VFSACSN--FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
++S C AR +FN++ D+ WN++I+G+ HS EA F +MR+ ++P
Sbjct: 183 DMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTES 242
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE- 359
+ S++ +C ++ G Q+H+ ++K G+D NV V +A++ MYAKC + +A L F
Sbjct: 243 SYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTM 302
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
+ KN V+WN +I Q+ ++ LF ML ++ KPD +TF V+ C+
Sbjct: 303 MMKNI--VAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCS 353
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 164/318 (51%), Gaps = 15/318 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S C++ + + + + Q+ N++ +T A ++S+CS L L GR+VH +
Sbjct: 109 NTLLSGYCQEEQHQDTIELFRRMQHQ-NVQPDRTTLAVILSSCSKLGILDFGRQVHSASV 167
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
D+ + + +++MY KCG + AR F+KM +R+VV W ++I+G + + +A
Sbjct: 168 RFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFD 227
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ QM ++G+MP + ++ S+I +CS L S+ GRQ+HA V+K + ++ +ALI MY
Sbjct: 228 FFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYA 287
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + DAR F + K++ +W MI +++ G +A+ F ML +P+ F
Sbjct: 288 KCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYML-TTEQKPDAVTFI 346
Query: 243 SVFSACS-----NFARILFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEMRD 292
+V + CS + A FN +++ P + LI + E +L +M
Sbjct: 347 AVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPC 406
Query: 293 RELLPDGLTVHSLLCACI 310
++ D + LL AC+
Sbjct: 407 KD---DPIIWEVLLAACV 421
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 168/382 (43%), Gaps = 73/382 (19%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
+P+ V +++L K + AR FDK+ + +V +W +++G Q Q D I+L+ +
Sbjct: 71 EPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRR 130
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M V P + T I+ +CS LG + GRQ+H+ ++ + + + L+ MY+K +
Sbjct: 131 MQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQ 190
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
I AR++F+ + +DV W S+I+ + EA F +M +G P E + S+ +
Sbjct: 191 IGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENG-IMPTESSYASMIN 249
Query: 247 ACSNF----------------------------------------ARILFNEIDSPDLAS 266
+CS AR+ F+ + ++ +
Sbjct: 250 SCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVA 309
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WN +I G A + ++A+ LF M E PD +T ++L C HS ++
Sbjct: 310 WNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGC-----------SHSGLV 358
Query: 327 K--MGFDSNVPVCNAILTMYAKCSVLCNAL-----------LVFKELGKNADSVSWNSII 373
M F +++ I+ + + L +AL L+ K K+ D + W ++
Sbjct: 359 DKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKD-DPIIWEVLL 417
Query: 374 AACLQHNQ-------AEELFRL 388
AAC+ H+ AE LFR+
Sbjct: 418 AACVVHHNAELGKCAAEHLFRI 439
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 121/257 (47%), Gaps = 48/257 (18%)
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+ GF S+ V N+++ MY KC + A+ VF+ L + VSWN +I Q +
Sbjct: 1 RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESL-PSVTIVSWNILITGFGQEGSCAKAV 59
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
+ S M + +P+ +T+++++ +C
Sbjct: 60 EVLSLMQEAGFEPNEVTYSNLLASC----------------------------------- 84
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
IK + SAR +F+ + P V +W++L+ GY Q + ++LF RM+ V P+ TL
Sbjct: 85 IKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLA 144
Query: 507 GVLTACSHVGLVEEGLHLYR-----IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
+L++CS +G+++ G ++ ++ N+ + S +VD+ ++ G + A
Sbjct: 145 VILSSCSKLGILDFGRQVHSASVRFLLHNDMFV------ASGLVDMYSKCGQIGIARSIF 198
Query: 562 NQMACDADIVVWKSLLA 578
N+M + D+V W S+++
Sbjct: 199 NKMT-ERDVVCWNSIIS 214
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 158/508 (31%), Positives = 256/508 (50%), Gaps = 48/508 (9%)
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
L+ H L + +L AR+ FD+MP+R+VVSW AM++G +QN +A +++ +M
Sbjct: 32 LERHDLRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM---- 87
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
++ ++ A G + R+L +S+ LI+ N ++ Y K +R++DAR
Sbjct: 88 PCKNSISWNGMLAAYVQNGRIEDARRL----FESKADWELISWNCMMGGYVKRNRLVDAR 143
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF 251
+F + +D SW +MI+ +++ G LEA F E + + G V + +
Sbjct: 144 GIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDE 203
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR +F+ + + SWNA+IAG ++A LF M C
Sbjct: 204 ARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAM-----------------PC-- 244
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
NV N ++T YA+ + A F + + DS+SW +
Sbjct: 245 --------------------QNVSSWNTMITGYAQNGDIAQARNFFDRMPQR-DSISWAA 283
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
IIA Q EE LF M + + TF + CA++A+LE+ Q+H + K G
Sbjct: 284 IIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAG 343
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
L +V N L+ +Y KCG++ A +F +E +VVSW+++I GYA+ G G EAL LF
Sbjct: 344 LESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFE 403
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
M+ G+ P+ VT+VGVL+ACSH GLV++G + M +YGI +H +C++DLL RA
Sbjct: 404 SMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRA 463
Query: 552 GCVHEAEDFINQMACDADIVVWKSLLAS 579
G + +A++ + M + D W +LL +
Sbjct: 464 GRLDDAQNLMKNMPFEPDAATWGALLGA 491
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 218/481 (45%), Gaps = 35/481 (7%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+ C R+L+ R + D + + DVV N +L+ Y + G +++A+ FD+MP +N
Sbjct: 37 LRGCVRYRNLRAARLLFDQM----PERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNS 92
Query: 102 VSWTAMIAGCSQNYQENDAIKLY-----IQMLQSGVMPGQFTFGSIIKACSGL------- 149
+SW M+A QN + DA +L+ +++ M G + + + G+
Sbjct: 93 ISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPER 152
Query: 150 ----------GSVCLGRQLHAHVIKSEHG-SHLIAQNALIAMYTKFDRILDARNVFSGIA 198
G G L A + E + A+++ Y + + +AR VF G+
Sbjct: 153 DEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP 212
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE 258
K+ SW ++IA + + +A F M N I G + AR F+
Sbjct: 213 EKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDR 272
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGRLTLYQ 317
+ D SW A+IAG A EA+ LF EM RD E L + T S L C L
Sbjct: 273 MPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERL-NRSTFTSTLSTCAEIAALEL 331
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G QVH ++K G +S V NA+L MY KC + +A +VF+ + + + VSWN++IA
Sbjct: 332 GKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI-EEKEVVSWNTMIAGYA 390
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDV 436
+H +E LF M + I PD +T V+ AC+ ++ T+ +T+ G+ +
Sbjct: 391 RHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANS 450
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYAQFG---CGDEALKLFTR 492
++D+ + G L A+ L M PD +W +L+ G G++A K+
Sbjct: 451 KHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFE 510
Query: 493 M 493
M
Sbjct: 511 M 511
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 129/245 (52%), Gaps = 10/245 (4%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VS + + +EA +D ++ ++ +I+ + + R++ + +
Sbjct: 192 VSGYVQNGMLDEARRVFDGMPEKNSV-----SWNAIIAGYVQCKRMDQARELFEAM---P 243
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
CQ +V N ++ Y + G + AR FD+MPQR+ +SW A+IAG +Q+ +A+ L++
Sbjct: 244 CQ-NVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFV 302
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + G + TF S + C+ + ++ LG+Q+H V+K+ S NAL+ MY K
Sbjct: 303 EMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCG 362
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I DA VF GI K+V SW +MIA +++ G+ EAL F M G P++ V
Sbjct: 363 NIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGIL-PDDVTMVGVL 421
Query: 246 SACSN 250
SACS+
Sbjct: 422 SACSH 426
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 110/206 (53%), Gaps = 10/206 (4%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
Q+ Y E + R+ ST+ +S C+ + +L+LG++VH ++ + +
Sbjct: 290 QSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCY 349
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ N +L MY KCG+++DA + F+ + ++ VVSW MIAG +++ +A+ L+ M ++G
Sbjct: 350 VGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTG 409
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA-----LIAMYTKFDR 186
++P T ++ ACS G V G + + + + ++G I N+ +I + + R
Sbjct: 410 ILPDDVTMVGVLSACSHTGLVDKGTE-YFYSMTQDYG---ITANSKHYTCMIDLLGRAGR 465
Query: 187 ILDARNVFSGIA-RKDVTSWGSMIAA 211
+ DA+N+ + D +WG+++ A
Sbjct: 466 LDDAQNLMKNMPFEPDAATWGALLGA 491
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 174/599 (29%), Positives = 289/599 (48%), Gaps = 61/599 (10%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
N++ ++ +T LI+ S+ L + H +L+ + D+ + +
Sbjct: 5 NSSGKLSRNTLFSLINKASTFPHLA---QTHAQFILNGYRFDLATLTKLTQKLFDFSATR 61
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ-SGVMPGQFTFGSIIKAC 146
AR F +P+ ++ + ++ G S N + +I LY + + + + P FT+ + AC
Sbjct: 62 HARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAAC 121
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
S + L LHAH I +GS++ +AL+ +Y KF R++ AR VF G+ +D W
Sbjct: 122 SNDKHLML---LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWN 178
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHG--------------AYQPNEFIFG---------- 242
+MI K +++ F EM+ G A + E G
Sbjct: 179 TMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKI 238
Query: 243 -------------SVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
S++S C N AR+LF I+ PDL ++NA+I+G ++ ++ LF
Sbjct: 239 GFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLF 298
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGM-------QVHSYIIKMGFDSNVPVCNAI 340
RELL G V S +G + L+ +H + +K G N V A
Sbjct: 299 -----RELLFSGERVSS--STIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAF 351
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+Y K + + A +F E V+WN++I+ Q+ E LF M+ ++ P+
Sbjct: 352 TAIYNKLNEIDLARHLFDE-SPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPN 410
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
+T ++ ACA++ SL +H I L +++V L+D+Y KCG++ A +LF+
Sbjct: 411 AVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFD 470
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
M + V+W+++I GY G G EALKL+ M LG +P+ VT + VL ACSH GLV E
Sbjct: 471 SMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGE 530
Query: 521 GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G ++ M N+Y I P EH +C+VD+L R+G + +A +FI +M + VW +LL +
Sbjct: 531 GEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGA 589
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 130/494 (26%), Positives = 224/494 (45%), Gaps = 45/494 (9%)
Query: 22 YDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYG 81
Y + NTN+ TYA ++ACS+ + L L +H H ++ +V + + ++++Y
Sbjct: 98 YTHLRRNTNLSPDNFTYAFAVAACSNDKHLML---LHAHSIIDGYGSNVFVGSALVDLYC 154
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
K + AR FD MP+R+ V W MI G +N +D+I+L+ +M+ GV T +
Sbjct: 155 KFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTA 214
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
++ A + L + +G + +K G LI++Y+K + AR +F I R D
Sbjct: 215 VLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPD 274
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI---------FGSVFSACS--- 249
+ ++ +MI+ F+ G ++ F E+L G + I FG + ACS
Sbjct: 275 LIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHG 334
Query: 250 ---------------------------NFARILFNEIDSPDLASWNALIAGVASHSNANE 282
+ AR LF+E + +WNA+I+G + +
Sbjct: 335 FCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTET 394
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
A+SLF EM E P+ +T+ ++L AC +L G VH I + N+ V A++
Sbjct: 395 AISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVD 454
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
MYAKC + A +F + + ++V+WN++I H E +L++ ML P +
Sbjct: 455 MYAKCGNISEAWQLFDSMSEK-NTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAV 513
Query: 403 TFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
TF V+ AC+ + E H + K + + ++DI + G L A +
Sbjct: 514 TFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKK 573
Query: 462 ME-NPDVVSWSSLI 474
M P W +L+
Sbjct: 574 MPVEPGPAVWGTLL 587
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 125/242 (51%), Gaps = 11/242 (4%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
C L+ E L + + R+ ST GLI S L L +H + S +
Sbjct: 293 CSVKLFRELLFSGE--------RVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILN 344
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
+ +Y K ++ AR FD+ P++ VV+W AMI+G +QN AI L+ +M++
Sbjct: 345 PTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMK 404
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRIL 188
+ P T +I+ AC+ LGS+ G+ +H H+IKSE+ ++ AL+ MY K I
Sbjct: 405 TEFTPNAVTITTILSACAQLGSLSFGKWVH-HLIKSENLEPNIYVSTALVDMYAKCGNIS 463
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
+A +F ++ K+ +W +MI + GY EAL +NEMLH G Y P+ F SV AC
Sbjct: 464 EAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLG-YNPSAVTFLSVLYAC 522
Query: 249 SN 250
S+
Sbjct: 523 SH 524
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 176/407 (43%), Gaps = 49/407 (12%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVH---DHILLSKCQPDVVLQNHILNMYGKCGSLE 87
+R+ ST ++ A + L+ L++G + I C D VL ++++Y KCG +
Sbjct: 205 VRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFC--DYVLTG-LISLYSKCGDVN 261
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
AR+ F ++ + +++++ AMI+G + N ++KL+ ++L SG T +I S
Sbjct: 262 TARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHS 321
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
G + L +H +KS + A A+Y K + I AR++F K V +W +
Sbjct: 322 PFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNA 381
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------- 254
MI+ +++ G A+ F EM+ + PN ++ SAC+ +
Sbjct: 382 MISGYTQNGSTETAISLFKEMM-KTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSE 440
Query: 255 ---------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
LF+ + + +WN +I G H +EA+ L+
Sbjct: 441 NLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLY 500
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYAK 346
+EM P +T S+L AC + +G ++ H+ + K + + ++ + +
Sbjct: 501 NEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGR 560
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
L AL K++ W +++ AC+ H ++ RL S L
Sbjct: 561 SGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDT-DIARLASERL 606
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 82/165 (49%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN E ++ T T ++SAC+ L SL G+ VH I +P++
Sbjct: 388 QNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIY 447
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
+ +++MY KCG++ +A FD M ++N V+W MI G + ++A+KLY +ML G
Sbjct: 448 VSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLG 507
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA 176
P TF S++ ACS G V G ++ +++ LI A
Sbjct: 508 YNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYA 552
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 183/587 (31%), Positives = 290/587 (49%), Gaps = 88/587 (14%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
+++ N ++ Y K L+ AR FD+MPQR VVSW MI+ S++ + ++A+ L M
Sbjct: 71 EIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMH 130
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK----- 183
+S + + TF S++ C+ L + G+ +H V+KS S + +AL+ Y
Sbjct: 131 RSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIG 190
Query: 184 -----FDRIL---------------------DARNVFSGIARKDVTSWGSMIAAFSKLGY 217
FD ++ DA +VF + R+DV +W ++I+ FSK G
Sbjct: 191 EARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGD 250
Query: 218 EL-EALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+AL F M+ G PNEF F V AC
Sbjct: 251 GCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIG 310
Query: 252 -ARILF----NEID----------SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A + F ID +P L + N+LI G+ S +A +F+ M + +
Sbjct: 311 GALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPV 370
Query: 297 PDGLTVHSLLCACIGRL----TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
L + A G++ L++ M + F SN ++++Y++ +
Sbjct: 371 SYNLMIKGY--AVGGQMDDSKRLFEKMPCRTI-----FSSN-----TMISVYSRNGEIDK 418
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
AL +F+E D V+WNS+I+ + Q EE +L+ M I+ TF+ + AC+
Sbjct: 419 ALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACS 478
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+ SL+ LH ++ KT +V+V L+D+Y KCGS+ A+ F + +P+V +W++
Sbjct: 479 CLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTA 538
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
LI G+A G G EA+ LF M G++PN T VGVL+ACS GLV EG+ ++ ME Y
Sbjct: 539 LINGHAYHGLGSEAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCY 598
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ PT EH +CVVDLL R+G + EAE+FI +M +AD VVW +LL++
Sbjct: 599 SVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSA 645
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 125/480 (26%), Positives = 220/480 (45%), Gaps = 75/480 (15%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +SS K ++EAL +S + +++++ ST++ ++S C+ LR L+ G+ +H +L
Sbjct: 107 NTMISSYSKHGRFSEALFLV-YSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVL 165
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFD---------------------------- 94
S + ++ + +L Y C + +AR FD
Sbjct: 166 KSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALS 225
Query: 95 ---KMPQRNVVSWTAMIAGCSQNYQE-NDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGL 149
KMP+R+VV+WT +I+G S+N A++++ M++SG P +FTF +++AC L
Sbjct: 226 VFVKMPRRDVVAWTTLISGFSKNGDGCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRL 285
Query: 150 GSVCLGRQLHAHVIK------SEHGSHLI-------------------------AQNALI 178
G + +GR +H ++K G L+ A N+LI
Sbjct: 286 GILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLI 345
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
RI DA VF+G+ + S+ MI ++ G ++ F +M + N
Sbjct: 346 EGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNT 405
Query: 239 FIFGSVFSACSNFARI--LFNEI-DSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
I SV+S + LF E + D +WN++I+G EA+ L+ M +
Sbjct: 406 MI--SVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSI 463
Query: 296 LPDGLTVHSLL--CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
T +L C+C+G +L QG +H+++IK F+SNV V +++ MY+KC + A
Sbjct: 464 QQTRSTFSALFHACSCLG--SLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEA 521
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
F + + + +W ++I H E LF M+ + P+ TF V+ AC++
Sbjct: 522 QTSFVSIF-SPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGATFVGVLSACSR 580
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 144/287 (50%), Gaps = 17/287 (5%)
Query: 48 LRSLQLGRKVHDHILLSKCQP--DVVLQNHILNMYGKCGSLEDARMGFDKMP-QRNVVSW 104
++ +G ++ D L + P + N ++++Y + G ++ A F++ +++ V+W
Sbjct: 376 IKGYAVGGQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTW 435
Query: 105 TAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK 164
+MI+G + Q +A+KLYI M + + + TF ++ ACS LGS+ G+ LHAH+IK
Sbjct: 436 NSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIK 495
Query: 165 SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCH 224
+ S++ +LI MY+K I++A+ F I +V +W ++I + G EA+
Sbjct: 496 TPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISL 555
Query: 225 FNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFNEID-----SPDLASWNALIAGV 274
F+ M+ G PN F V SACS N +F+ ++ +P L + ++ +
Sbjct: 556 FDXMIEQG-LAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLL 614
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
+ EA +M L DG+ +LL AC + L G +V
Sbjct: 615 GRSGHIREAEEFIKKM---PLEADGVVWGALLSACWFWMDLEVGERV 658
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 188/417 (45%), Gaps = 53/417 (12%)
Query: 169 SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
S +I+ N I+ Y K ++ AR +F + ++ V SW +MI+++SK G EAL M
Sbjct: 70 SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSM 129
Query: 229 LHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
H + +E F SV S C A L G H + L S
Sbjct: 130 -HRSHMKLSESTFSSVLSVC----------------ARLRCLRDGKLIH-----CLVLKS 167
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
EL+ L C IG + +V +++ N + + +L Y C+
Sbjct: 168 GSESFELVGSALLYFYASCFEIG-----EARRVFDVLVR----RNEVLWSLMLVGYVTCN 218
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQH----NQAEELFRLFSRMLASQIKPDHITF 404
V+ +AL VF ++ + D V+W ++I+ ++ +A E+FRL R + + P+ TF
Sbjct: 219 VMDDALSVFVKMPRR-DVVAWTTLISGFSKNGDGCGKALEMFRLMMR--SGETTPNEFTF 275
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
+ V+ AC ++ L + +H + K GL +D + L++ Y +C ++ A ++ + N
Sbjct: 276 DCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVN 335
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNLVTLVGVLTACSHVGLVEEGLH 523
P + + +SLI G G ++A +F M + VS NL ++ + G +++
Sbjct: 336 PCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNL-----MIKGYAVGGQMDDSKR 390
Query: 524 LYRIMENEYGIIPTRE--HCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
L+ M P R + ++ + +R G + +A + + + D V W S+++
Sbjct: 391 LFEKM-------PCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMIS 440
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 104/464 (22%), Positives = 175/464 (37%), Gaps = 119/464 (25%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKC--QPDVVLQNHILNMYGKC----------- 83
T+ ++ AC L L +GR VH LL KC + D + ++ Y +C
Sbjct: 274 TFDCVVRACGRLGILSVGRTVHG--LLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCK 331
Query: 84 --------------------GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
G +EDA + F+ M + N VS+ MI G + Q +D+ +L
Sbjct: 332 GVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRL 391
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ +M P + F S N +I++Y++
Sbjct: 392 FEKM------PCRTIFSS---------------------------------NTMISVYSR 412
Query: 184 FDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
I A +F KD +W SMI+ + G EAL + M H + Q F
Sbjct: 413 NGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITM-HRLSIQQTRSTFS 471
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
++F ACS A+ F I SP
Sbjct: 472 ALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSP 531
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV- 321
++A+W ALI G A H +EA+SLF M ++ L P+G T +L AC + +GM++
Sbjct: 532 NVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIF 591
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
HS + ++ + + + A K++ AD V W ++++AC
Sbjct: 592 HSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMD 651
Query: 382 AEELFRLFSRMLASQIKP--DHITFNDVMGACAKMASLEMVTQL 423
E R+ +M + KP ++ +++ + MV ++
Sbjct: 652 LEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKMMVRKI 695
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S EAL Y + + +I+ ST++ L ACS L SLQ G+ +H H++
Sbjct: 436 NSMISGYIHSGQPEEALKLY-ITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLI 494
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + +V + +++MY KCGS+ +A+ F + NV +WTA+I G + + ++AI
Sbjct: 495 KTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAIS 554
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
L+ M++ G+ P TF ++ ACS G V G ++
Sbjct: 555 LFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKI 590
>gi|357122034|ref|XP_003562721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Brachypodium distachyon]
Length = 689
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 179/576 (31%), Positives = 273/576 (47%), Gaps = 48/576 (8%)
Query: 49 RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCG-SLEDARMGFDKMPQRNVVSWTAM 107
R L + LL C N +L Y L AR FD++P+ + SW ++
Sbjct: 3 RRLTIAAAKSHATLLKSCIISPTRWNQLLTAYSLSPLGLAAARRVFDEIPRPDAASWNSL 62
Query: 108 IAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
+ A L M GV F GS +++ + LG QL + KS
Sbjct: 63 LTAHVSAGAHPAAWCLLRAMHAQGVAANTFALGSSLRSAAAARCPALGAQLQSLAFKSGL 122
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
++ A +AL+ MY K R+ DAR VF G+ ++ SW ++IA + + G L+AL F
Sbjct: 123 ADNVFAASALLHMYAKCGRVRDARRVFDGMPERNTVSWNALIAGYVESGKVLQALELFIN 182
Query: 228 MLHHGAYQPNEFIFGSVFSAC--SNF---------------------------------- 251
M P+E F ++ +A SN+
Sbjct: 183 M-ETERLVPDEATFAALLTAFDDSNYFLMHQLHGKIVKYGSALGLTVSNAAITAYSQCGA 241
Query: 252 ---ARILFNEI-DSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLL 306
+R +F++I DS DL SWNA++ H +AM F M R+ + D + S++
Sbjct: 242 LAESRRIFDQIGDSRDLISWNAMLGAYTYHGMDYDAMGFFVRMIRESGVQLDMYSFTSII 301
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC---NALLVFKELGKN 363
C +QG +H +IK G + PVCNA++ MY + S C +A F L
Sbjct: 302 STCPEHDD-HQGRAIHGLVIKNGLEGATPVCNALIAMYTRISGNCMMEDACKCFDSLLIK 360
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
D+VSWNS++ QHN + + R F M ++ I+ D F+ + +C+++A L++ Q+
Sbjct: 361 -DTVSWNSMLTGYSQHNLSADALRFFRCMQSANIRCDEYAFSAALRSCSELAVLQLGRQI 419
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H I +G A + FV + L+ +Y K G L A+K F + V W+S+I GYAQ G
Sbjct: 420 HGSIIHSGFASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFGYAQHGHA 479
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
LF M L V + VT VG++T+CSH GLV+EG + ME YGI EH +C
Sbjct: 480 HIVHSLFNEMVELKVPLDHVTFVGLITSCSHAGLVDEGSEILNAMETRYGIPLRMEHYAC 539
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
VDL RAG + +A++ I+ M + D +VW +LL +
Sbjct: 540 GVDLYGRAGQLEKAKELIDSMPFEPDAMVWMTLLGA 575
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 106/212 (50%), Gaps = 5/212 (2%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + NL +AL + Q+ NIR ++ + +CS L LQLGR++H I+
Sbjct: 366 NSMLTGYSQHNLSADALRFFRCMQS-ANIRCDEYAFSAALRSCSELAVLQLGRQIHGSII 424
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S + + + ++ MY K G L+DA+ F++ + + V W +MI G +Q+ +
Sbjct: 425 HSGFASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFGYAQHGHAHIVHS 484
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL--IAM 180
L+ +M++ V TF +I +CS G V G ++ + +++ +G L ++ + +
Sbjct: 485 LFNEMVELKVPLDHVTFVGLITSCSHAGLVDEGSEI-LNAMETRYGIPLRMEHYACGVDL 543
Query: 181 YTKFDRILDARNVFSGIA-RKDVTSWGSMIAA 211
Y + ++ A+ + + D W +++ A
Sbjct: 544 YGRAGQLEKAKELIDSMPFEPDAMVWMTLLGA 575
>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
Length = 828
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 164/581 (28%), Positives = 293/581 (50%), Gaps = 44/581 (7%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y +I A + + L +GRK+H IL S D V+ ++ MYG+ L DA+ FD+M
Sbjct: 105 YPSVIRAVTGVGELIVGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMC 164
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
R++V W+++I+ +N + ++++ M+ G+ P S+ +AC +G + L +
Sbjct: 165 VRDLVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKS 224
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H +V++ N+LI MY++ + A+ +F I + + W SMI+A+++
Sbjct: 225 VHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNEC 284
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------------------- 254
EAL F +M +PN+ SV ++C+ R+
Sbjct: 285 FEEALDVFIKM-QDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLG 343
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
L + I + ++ SWN LI+ A +EAM+ F+ M + ++
Sbjct: 344 PALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIM 403
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD ++ S + A ++ G Q+H +++K GF V N+++ MY+KC +A +
Sbjct: 404 PDSFSLASSISASASSGSIQFGQQIHGHVMKRGFFDEF-VQNSLMDMYSKCGFASSAYTI 462
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F ++ K+ V+WN +I Q+ + E LF M ++++ + +TF + AC+ +
Sbjct: 463 FNKI-KHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGY 521
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L+ +H I TG D+++ L+D+Y KCG L +A+K+F+ + VVSWS++I
Sbjct: 522 LDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAA 581
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
+ G + A LF +M + PN VT + +L+AC H G V+EG + M + YGI+P
Sbjct: 582 HGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVP 641
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
EH + +VDLL+RAG ++ A + I + +W +LL
Sbjct: 642 NVEHFASIVDLLSRAGDINGAYEIIKSIRTPVAASIWGALL 682
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 155/596 (26%), Positives = 288/596 (48%), Gaps = 68/596 (11%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+ Y L CS+LR L ++H H++++ + + +L Y + GSL+ +R+ F
Sbjct: 2 TLYMPLFRTCSTLRRLT---QLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYT 58
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ---FTFGSIIKACSGLGSV 152
P + ++ +I N+ + + L+ +Q G Q F + S+I+A +G+G +
Sbjct: 59 HPSPDSFMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGEL 118
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
+GR+LH ++KS + +L+ MY + + DA+ VF + +D+ W S+I+ +
Sbjct: 119 IVGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCY 178
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------- 251
+ G E L F M+ G +P+ + SV AC
Sbjct: 179 VENGVYREGLEMFRSMICEGI-RPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGD 237
Query: 252 -------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
A+ LF ID + W ++I+ + EA+ +F +M+D
Sbjct: 238 GSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQD 297
Query: 293 RELLPDGLTVHSLL--CACIGRLTLYQGMQVHSYIIK--MGFDSNVPVCNAILTMYAKCS 348
E+ P+ +T+ S+L CA +GRL +G VH ++++ MG + + + A++ Y+ C
Sbjct: 298 SEVEPNDVTMISVLNSCARLGRLK--EGKSVHCFVLRNAMGV-TGLDLGPALIDFYSACW 354
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ + + +G N + VSWN++I+ + +E F+ M+A I PD + +
Sbjct: 355 KMSSCEKLLHSIG-NENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSI 413
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
A A S++ Q+H ++ K G FD FV N LMD+Y KCG SA +FN +++ +V
Sbjct: 414 SASASSGSIQFGQQIHGHVMKRGF-FDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIV 472
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
+W+ +I G++Q G EAL LF M + N VT + + ACS++G +++G ++
Sbjct: 473 AWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIH--- 529
Query: 529 ENEYGIIPTREHC-----SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ II T + +VD+ A+ G + A+ + + + +V W +++A+
Sbjct: 530 ---HKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIV-EKSVVSWSTMIAA 581
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 182/429 (42%), Gaps = 55/429 (12%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S+ + + EAL + ++ + T ++++C+ L L+ G+ VH +L +
Sbjct: 276 ISAYNQNECFEEALDVF-IKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNA 334
Query: 66 CQ-PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
+ L +++ Y C + + N+VSW +I+ ++ ++A+ +
Sbjct: 335 MGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFF 394
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
M+ G+MP F+ S I A + GS+ G+Q+H HV+K + QN+L+ MY+K
Sbjct: 395 ACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGFFDEFV-QNSLMDMYSKC 453
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
A +F+ I K + +W MI FS+ G +EAL F+EM + + N+ F S
Sbjct: 454 GFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFKN-RLEINKVTFLSA 512
Query: 245 FSACSNF----------------------------------------ARILFNEIDSPDL 264
ACSN A+ +F+ I +
Sbjct: 513 IQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSV 572
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG-MQVHS 323
SW+ +IA H N A SLF +M + P+ +T ++L AC ++ +G ++
Sbjct: 573 VSWSTMIAAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYFNT 632
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
G NV +I+ + ++ + A + K + + W +++ C
Sbjct: 633 MRDYYGIVPNVEHFASIVDLLSRAGDINGAYEIIKSIRTPVAASIWGALLNGC------- 685
Query: 384 ELFRLFSRM 392
R++ RM
Sbjct: 686 ---RIYGRM 691
>gi|147846491|emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
Length = 1007
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 172/570 (30%), Positives = 275/570 (48%), Gaps = 43/570 (7%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P+ ++ ACSSL ++ G+ +H +L N + Y K G+L+ A FD
Sbjct: 50 PTLVHSILKACSSL-PVRHGKSIHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVFD 108
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
M R+ VSW MI G + + + Q P T I AC LG++
Sbjct: 109 SMRSRDSVSWNIMIHGHLSRGASDXGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEE 168
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G ++H ++I+S QN+L++MY D + A +F + +DV SW MI + +
Sbjct: 169 GLKMHGYIIRSGFLDIPSVQNSLLSMYADND-MERAEELFDEMCERDVISWSVMIGGYVQ 227
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------------- 254
G AL F EM + + + SV AC+N I
Sbjct: 228 TGEAXMALQLFLEMXSNAXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLF 287
Query: 255 --------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
FNE+ + SWN++I+G+ +EA+SLF M
Sbjct: 288 VGNSIIDMYSKXDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAG 347
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
D +T+ +LL +C + +Q +HS +I+ G++ N V N+++ Y+KC ++ A
Sbjct: 348 FRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAW 407
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F L K D+VSW+++IA + +E LF M +Q KP+ +T ++ A +
Sbjct: 408 KLFDRL-KTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVS 466
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
A L+ H + GLA +V V ++D+Y KCG +G +RK F+ + ++VSW ++I
Sbjct: 467 ADLKRSKWAHGIXIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMI 526
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
G +AL L + M+ G+ PN VT + VL+ACSH GLVEEGL + M ++G+
Sbjct: 527 AACGMNGLARDALALLSEMKLHGLKPNXVTTLSVLSACSHGGLVEEGLSFFENMVQDHGV 586
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQM 564
P EH SC+VD+L RAG ++ A + I +M
Sbjct: 587 EPGLEHYSCMVDMLXRAGKLNXAMNLIEKM 616
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 178/393 (45%), Gaps = 44/393 (11%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
+N I + T ++ AC++ + +GR VH ++ D+ + N I++MY K
Sbjct: 243 SNAXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKXDDH 302
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
E A F++MP RN VSW ++I+G + + ++A+ L+ M ++G + T +++++C
Sbjct: 303 ESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSC 362
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
+ +H+ VI+ + + N+LI Y+K D I A +F + KD SW
Sbjct: 363 KYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWS 422
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS----------------- 249
+MIA F+ G EA+ F EM + +PN S+ A S
Sbjct: 423 AMIAGFNHCGKPDEAIALFQEM-NQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIXIR 481
Query: 250 -----------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
+R F++I ++ SW A+IA + A +A++L
Sbjct: 482 RGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALAL 541
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYA 345
SEM+ L P+ +T S+L AC + +G+ +++ G + + + ++ M
Sbjct: 542 LSEMKLHGLKPNXVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLX 601
Query: 346 KCSVLCNAL-LVFKELGKNADSVS-WNSIIAAC 376
+ L A+ L+ K + D W ++++AC
Sbjct: 602 RAGKLNXAMNLIEKMPERMRDGAGLWGALLSAC 634
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 157/325 (48%), Gaps = 15/325 (4%)
Query: 261 SPDLASWNALIAGVASHS--NANEAMSLFSEMRDR-ELLPDGLTVHSLLCACIGRLTLYQ 317
+P L +WN I + ++ EA S + +M+ L D VHS+L AC L +
Sbjct: 9 APKLPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKAC-SSLPVRH 67
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G +H+ ++K GFDS N+ Y K L +AL VF + ++ DSVSWN +I L
Sbjct: 68 GKSIHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVFDSM-RSRDSVSWNIMIHGHL 126
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
++ F + +P+ T + AC + ++E ++H YI ++G
Sbjct: 127 SRGASDXGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPS 186
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS-L 496
V N L+ +Y + A +LF+ M DV+SWS +I GY Q G AL+LF M S
Sbjct: 187 VQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAXMALQLFLEMXSNA 245
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM---ENEYGIIPTREHCSCVVDLLARAGC 553
+ + +T+V VL AC++ G + G ++ ++ +Y + + ++D+ ++
Sbjct: 246 XIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVG----NSIIDMYSKXDD 301
Query: 554 VHEAEDFINQMACDADIVVWKSLLA 578
A N+M C + V W S+++
Sbjct: 302 HESAFKAFNEMPC-RNTVSWNSIIS 325
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 149/318 (46%), Gaps = 15/318 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S L + ++EAL + +S R T L+ +C + +H ++
Sbjct: 321 NSIISGLVRTEKHSEALSLF-YSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVI 379
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + + N +++ Y KC +E A FD++ ++ VSW+AMIAG + + ++AI
Sbjct: 380 RWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIA 439
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ +M Q+ P T S+++A S + + H I+ + + A++ MY
Sbjct: 440 LFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIXIRRGLAAEVAVGTAILDMYA 499
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I +R F I K++ SWG+MIAA G +AL +EM HG +PN
Sbjct: 500 KCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHG-LKPNXVTTL 558
Query: 243 SVFSACSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
SV SACS+ F ++ + P L ++ ++ + N AM+L +M +
Sbjct: 559 SVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLXRAGKLNXAMNLIEKMPE 618
Query: 293 RELLPDGLTVH-SLLCAC 309
R + DG + +LL AC
Sbjct: 619 R--MRDGAGLWGALLSAC 634
>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 166/532 (31%), Positives = 267/532 (50%), Gaps = 49/532 (9%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FD+MPQR+ VSW MI+G + + ++ L+ M + G ++F ++K +
Sbjct: 4 FDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAKRF 63
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
LG Q+H V+K + ++ ++L+ MY K +R+ DA F I + SW ++IA F
Sbjct: 64 DLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIAGF 123
Query: 213 -----SKLGYELEALCHFNE--MLHHGAYQP----------------------------- 236
+K + L L + G + P
Sbjct: 124 VQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLEHE 183
Query: 237 ----NEFIFGSVFSAC---SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
N I S ++ C S+ R+ S DL SWN++IAG++ H A LF+E
Sbjct: 184 ITICNAMI--SSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTE 241
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK--C 347
M + D T ++ AC G G +H +IK G + V NA+++MY +
Sbjct: 242 MHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPT 301
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
V+ +AL +F+ L K D VSWNSI+ Q+ +E+ + F + +S I+ D F+ V
Sbjct: 302 GVMKDALSLFESL-KPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAV 360
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP-D 466
+ +C+ +A+L++ Q H TK+ + FV + L+ +Y KCG + +ARK F + + +
Sbjct: 361 LRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKHN 420
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
++W+++ILGYAQ G G +L LF++M + V + VT +LTACSH GL++EGL L
Sbjct: 421 TIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLN 480
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
ME Y I P EH + VDLL RAG V++ ++ I M + D +V K+ L
Sbjct: 481 SMEPVYKIQPRMEHYAAAVDLLGRAGLVNKVKELIESMPLNPDPMVLKTFLG 532
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/499 (23%), Positives = 202/499 (40%), Gaps = 113/499 (22%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+++ L+ +S + LG +VH ++ + +V + + +++MY KC +EDA F ++
Sbjct: 49 SFSRLLKGIASAKRFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEI 108
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ N VSW A+IAG Q A L M +++ V TF ++ L
Sbjct: 109 LEPNSVSWNALIAGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLL 168
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSK 214
+Q+HA V+K + NA+I+ Y + DA+ VF G+ KD+ SW SMIA SK
Sbjct: 169 KQVHAKVLKLGLEHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSK 228
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARIL-------------- 255
+ A F EM H + + + + + SACS +F + L
Sbjct: 229 HEQKESAFELFTEM-HRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTS 287
Query: 256 -----------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
F + DL SWN+++ G + + + +A+ F +R
Sbjct: 288 VSNALISMYIQFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRS 347
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ D ++L +C TL G Q H+ K F+SN V ++++ MY+KC V+ N
Sbjct: 348 SNIEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIEN 407
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQH--------------------------------- 379
A F+++ ++++WN++I QH
Sbjct: 408 ARKCFEQISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACS 467
Query: 380 ------------NQAEELFRLFSRM--------------LASQIK---------PDHITF 404
N E ++++ RM L +++K PD +
Sbjct: 468 HTGLIQEGLELLNSMEPVYKIQPRMEHYAAAVDLLGRAGLVNKVKELIESMPLNPDPMVL 527
Query: 405 NDVMGACAKMASLEMVTQL 423
+G C +EM TQ+
Sbjct: 528 KTFLGVCRACGEIEMATQV 546
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 135/261 (51%), Gaps = 3/261 (1%)
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
LF+E+ D SWN +I+G S + LF++M+ DG + LL
Sbjct: 3 LFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAKR 62
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
G QVH ++K G++ NV V ++++ MYAKC + +A F E+ +SVSWN++IA
Sbjct: 63 FDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEI-LEPNSVSWNALIA 121
Query: 375 ACLQHNQAEELFRLFSRM-LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
+Q + F L M + + + D TF ++ ++ Q+H + K GL
Sbjct: 122 GFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLE 181
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFM-ENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
++ + N ++ Y CG + A+++F+ + + D++SW+S+I G ++ + A +LFT
Sbjct: 182 HEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTE 241
Query: 493 MRSLGVSPNLVTLVGVLTACS 513
M + ++ T G+++ACS
Sbjct: 242 MHRNWIETDIYTYTGIVSACS 262
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 150/305 (49%), Gaps = 17/305 (5%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGK--CGSLEDARMGFD 94
TY G++SACS G+ +H ++ + + N +++MY + G ++DA F+
Sbjct: 253 TYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPTGVMKDALSLFE 312
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+ +++VSW +++ G SQN DA+K + + S + + F +++++CS L ++ L
Sbjct: 313 SLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQL 372
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK-DVTSWGSMIAAFS 213
G+Q HA KS S+ ++LI MY+K I +AR F I+ K + +W +MI ++
Sbjct: 373 GQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKHNTIAWNAMILGYA 432
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEID-----SPD 263
+ G +L F++M + + + F ++ +ACS+ I L N ++ P
Sbjct: 433 QHGSGQVSLDLFSQMCNQNV-KLDHVTFTAILTACSHTGLIQEGLELLNSMEPVYKIQPR 491
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+ + A + + N+ L M L PD + + + L C + QV +
Sbjct: 492 MEHYAAAVDLLGRAGLVNKVKELIESM---PLNPDPMVLKTFLGVCRACGEIEMATQVAN 548
Query: 324 YIIKM 328
+++++
Sbjct: 549 HLLEI 553
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN +E V + ++NI + ++ ++ +CS L +LQLG++ H S + +
Sbjct: 331 QNGLSEDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSSFESNEF 390
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQR-NVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ + ++ MY KCG +E+AR F+++ + N ++W AMI G +Q+ ++ L+ QM
Sbjct: 391 VTSSLILMYSKCGVIENARKCFEQISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQ 450
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQL 158
V TF +I+ ACS G + G +L
Sbjct: 451 NVKLDHVTFTAILTACSHTGLIQEGLEL 478
>gi|224066769|ref|XP_002302206.1| predicted protein [Populus trichocarpa]
gi|222843932|gb|EEE81479.1| predicted protein [Populus trichocarpa]
Length = 681
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 168/537 (31%), Positives = 261/537 (48%), Gaps = 64/537 (11%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N + + + K G +E AR F++MP RN V W +MI ++N +A++L+ ++ +
Sbjct: 107 NVVFSGFAKAGEMEIARRLFNEMPNRNGVVWNSMIHSYARNGSPREAVRLFKELNLDPLD 166
Query: 134 PG---QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
F ++I AC+ LG + G+Q+HA ++ + ++LI +Y K + A
Sbjct: 167 KSCCDTFVLATVIGACTDLGEIQCGKQIHARILIDNMELDSVLTSSLINLYGKCGDLDSA 226
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
V + + D S ++I ++ +HG N
Sbjct: 227 HCVLNTMEEPDDFSLSALITGYA----------------NHGRM---------------N 255
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
AR F + + WN+LI+G +++ EA LF++M+ + L D T+ ++L AC
Sbjct: 256 DARRAFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLKVDFSTLATILSACS 315
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL---------- 360
G Q+H+Y K+G + V +A + Y+KC L +A +F EL
Sbjct: 316 SLCNSQHGKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKTYDTILLNS 375
Query: 361 --------GKNADS------------VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
GK D+ +SWNS+I Q+ E LF M ++ +
Sbjct: 376 MITVYSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMN 435
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
V+ ACA ++SLE+ Q+ T GL D + L+D Y KCG + RKLF+
Sbjct: 436 RFNLTSVISACASISSLELGEQIFARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFD 495
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
M D +SW+S+++GYA G G EAL LF MR GV P +T GVL+AC H GLV+E
Sbjct: 496 TMMKSDEISWNSMLMGYATNGHGLEALTLFNEMRHAGVRPTEITFTGVLSACDHCGLVKE 555
Query: 521 GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
G + IM+ +Y I P EH SC+VDL ARAGC+ EA + I +M +AD +W S+L
Sbjct: 556 GWRWFNIMQYDYHIDPGIEHYSCMVDLFARAGCLEEAMNLIKRMPFEADASMWSSVL 612
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 213/492 (43%), Gaps = 67/492 (13%)
Query: 151 SVCLGRQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
S+ G+QLH K S L N L+ MYT+ + DA +F + ++ SW +MI
Sbjct: 20 SIHQGKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAHKLFDEMPHRNCFSWNTMI 79
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNA 269
+ K G + ++ F+ M + Y N G + AR LFNE+ + + WN+
Sbjct: 80 EGYMKSGNKERSIRLFDMMSNKNDYSWNVVFSGFAKAGEMEIARRLFNEMPNRNGVVWNS 139
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLP---DGLTVHSLLCACIGRLTLYQGMQVHSYII 326
+I A + + EA+ LF E+ L D + +++ AC + G Q+H+ I+
Sbjct: 140 MIHSYARNGSPREAVRLFKELNLDPLDKSCCDTFVLATVIGACTDLGEIQCGKQIHARIL 199
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL------------------GKNADS-- 366
+ + + ++++ +Y KC L +A V + G+ D+
Sbjct: 200 IDNMELDSVLTSSLINLYGKCGDLDSAHCVLNTMEEPDDFSLSALITGYANHGRMNDARR 259
Query: 367 ----------VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
V WNS+I+ + +N+ E F LF+ M +K D T ++ AC+ + +
Sbjct: 260 AFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLKVDFSTLATILSACSSLCN 319
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG----------------------- 453
+ Q+H Y K GL D V + +D Y KCGSL
Sbjct: 320 SQHGKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKTYDTILLNSMITV 379
Query: 454 --------SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
A+++FN M + ++SW+S+I+G +Q GC EAL LF M L + N L
Sbjct: 380 YSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNL 439
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
V++AC+ + +E G ++ G+ + +VD + G + + M
Sbjct: 440 TSVISACASISSLELGEQIF-ARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTMM 498
Query: 566 CDADIVVWKSLL 577
+D + W S+L
Sbjct: 499 -KSDEISWNSML 509
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 196/449 (43%), Gaps = 106/449 (23%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE----------- 87
A +I AC+ L +Q G+++H IL+ + D VL + ++N+YGKCG L+
Sbjct: 176 ATVIGACTDLGEIQCGKQIHARILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLNTMEE 235
Query: 88 --------------------DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
DAR F + VV W ++I+G N +E +A L+ M
Sbjct: 236 PDDFSLSALITGYANHGRMNDARRAFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDM 295
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK-----------------SEHGS- 169
+ G+ T +I+ ACS L + G+Q+HA+ K S+ GS
Sbjct: 296 QKKGLKVDFSTLATILSACSSLCNSQHGKQMHAYACKVGLICDNVVASAFIDAYSKCGSL 355
Query: 170 -------------HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
I N++I +Y+ +I DA+ +F+ + K + SW SMI S+ G
Sbjct: 356 NDACKLFSELKTYDTILLNSMITVYSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNG 415
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------------------ 252
+EAL F M++ + N F SV SAC++ +
Sbjct: 416 CPVEALDLFC-MMNKLDLRMNRFNLTSVISACASISSLELGEQIFARATVVGLDSDEVIS 474
Query: 253 ----------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
R LF+ + D SWN+++ G A++ + EA++LF+EMR +
Sbjct: 475 TSLVDFYCKCGFIEIGRKLFDTMMKSDEISWNSMLMGYATNGHGLEALTLFNEMRHAGVR 534
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF--DSNVPVCNAILTMYAKCSVLCNAL 354
P +T +L AC + +G + + I++ + D + + ++ ++A+ L A+
Sbjct: 535 PTEITFTGVLSACDHCGLVKEGWRWFN-IMQYDYHIDPGIEHYSCMVDLFARAGCLEEAM 593
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ K + AD+ W+S++ C+ H + +
Sbjct: 594 NLIKRMPFEADASMWSSVLRGCMAHGEKD 622
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 165/367 (44%), Gaps = 46/367 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVH---- 58
N +S N EA + ++ Q +++ ST A ++SACSSL + Q G+++H
Sbjct: 273 NSLISGYVTNNEEIEAFLLFNDMQKK-GLKVDFSTLATILSACSSLCNSQHGKQMHAYAC 331
Query: 59 ------DHIL-------LSKCQP--------------DVVLQNHILNMYGKCGSLEDARM 91
D+++ SKC D +L N ++ +Y G +EDA+
Sbjct: 332 KVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKTYDTILLNSMITVYSNSGKIEDAKQ 391
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
F+ MP ++++SW +MI G SQN +A+ L+ M + + +F S+I AC+ + S
Sbjct: 392 IFNTMPSKSLISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNLTSVISACASISS 451
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ LG Q+ A S + +L+ Y K I R +F + + D SW SM+
Sbjct: 452 LELGEQIFARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTMMKSDEISWNSMLMG 511
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARILFNEIDS 261
++ G+ LEAL FNEM H G +P E F V SAC + F + ++
Sbjct: 512 YATNGHGLEALTLFNEMRHAGV-RPTEITFTGVLSACDHCGLVKEGWRWFNIMQYDYHID 570
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
P + ++ ++ A EAM+L M D S+L C+ G +V
Sbjct: 571 PGIEHYSCMVDLFARAGCLEEAMNLIKRM---PFEADASMWSSVLRGCMAHGEKDLGEKV 627
Query: 322 HSYIIKM 328
II++
Sbjct: 628 AQQIIEL 634
>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
Length = 605
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 161/506 (31%), Positives = 253/506 (50%), Gaps = 51/506 (10%)
Query: 118 NDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA 176
NDA+ L + L + + S+++ C + S GRQ HAHV+KS + N+
Sbjct: 41 NDALHLLNSIDLYDSRINKPLLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNS 100
Query: 177 LIAMYTKF--DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
L+++Y K D +L R VF G+ KDV SW SMI + + G A+ F +ML G
Sbjct: 101 LLSLYFKLGSDSLL-TRRVFDGLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGI- 158
Query: 235 QPNEFIFGSVFSACSNF----------------------------------------ARI 254
+PN F +V ACS AR
Sbjct: 159 EPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQ 218
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFS-EMRDRELLPDGLTVHSLLCACIGRL 313
LF+E+ PD W +I+ + EA+ F + R L PD T S+L AC
Sbjct: 219 LFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLG 278
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
L QG ++H+ +I GF NV ++++ MY KC + + +F + N +SVSW++++
Sbjct: 279 RLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRM-SNRNSVSWSALL 337
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
A + E+ LF M + D +F V+ ACA +A++ ++HC + G
Sbjct: 338 AVYCHNGDYEKAVNLFREMK----EVDLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGW 393
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
DV V + L+D+Y KCG + A ++F+ M ++++W+S+I G+AQ G A+++F M
Sbjct: 394 RDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAM 453
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
G+ P+ ++ +G+L ACSH GLV++ H + +M +YGI P EH +C+VDLL RAG
Sbjct: 454 IKEGIKPDCISFIGLLFACSHTGLVDQARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGL 513
Query: 554 VHEAEDFINQMACDADIVVWKSLLAS 579
+ EAE+ I C D +W LL +
Sbjct: 514 LEEAENLIENAECRNDSSLWLVLLGA 539
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 158/576 (27%), Positives = 272/576 (47%), Gaps = 68/576 (11%)
Query: 9 LCKQNLYNEAL---VAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
CK L N+AL + D + N +P YA L+ C + S GR+ H H++ S
Sbjct: 34 FCKSGLLNDALHLLNSIDLYDSRIN---KPLLYASLLQTCIKVDSFTRGRQFHAHVVKSG 90
Query: 66 CQPDVVLQNHILNMYGKCGSLEDA---RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D + N +L++Y K GS D+ R FD + ++VVSW +MI G + + AI+
Sbjct: 91 LETDRFVGNSLLSLYFKLGS--DSLLTRRVFDGLFVKDVVSWASMITGYVREGKSGIAIE 148
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ ML SG+ P FT ++IKACS +G++ LG+ H V++ S+ + ++LI MY
Sbjct: 149 LFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYG 208
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ--PNEFI 240
+ DAR +F + D W ++I+AF++ EAL F L H A++ P+ +
Sbjct: 209 RNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFF--YLKHRAHRLCPDNYT 266
Query: 241 FGSVFSACSNFARI----------------------------------------LFNEID 260
FGSV +AC N R+ LF+ +
Sbjct: 267 FGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMS 326
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ + SW+AL+A + + +A++LF EM++ +L G + AC G + G +
Sbjct: 327 NRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVDLYSFGTVIR----ACAGLAAVTPGKE 382
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H I+ G +V V +A++ +YAKC + A VF + + ++WNS+I Q+
Sbjct: 383 IHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRM-PTRNLITWNSMIHGFAQNG 441
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT-KTGLAFDVFVM 439
+ ++F M+ IKPD I+F ++ AC+ ++ +T K G+ V
Sbjct: 442 SSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYFDLMTGKYGIKPGVEHY 501
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL---ILGYAQFGCGDEALKLFTRMRSL 496
N ++D+ + G L A N +EN + + SSL +LG C + A + +
Sbjct: 502 NCMVDLLGRAGLLEEAE---NLIENAECRNDSSLWLVLLGACTTTCTNSATAERIAKKLM 558
Query: 497 GVSPN-LVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
+ P ++ V + VG ++ + + +M+N
Sbjct: 559 ELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNR 594
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 135/245 (55%), Gaps = 5/245 (2%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S+ + +LY EAL + + T+ +++AC +L L+ G ++H ++
Sbjct: 235 ISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYG 294
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+VV ++ +++MYGKCG++E ++ FD+M RN VSW+A++A N A+ L+
Sbjct: 295 FSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFR 354
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + + ++FG++I+AC+GL +V G+++H I+ +I ++AL+ +Y K
Sbjct: 355 EMKEVDL----YSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCG 410
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I A VF + +++ +W SMI F++ G A+ F M+ G +P+ F +
Sbjct: 411 CINFAYRVFDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGI-KPDCISFIGLL 469
Query: 246 SACSN 250
ACS+
Sbjct: 470 FACSH 474
>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
Length = 700
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 176/589 (29%), Positives = 293/589 (49%), Gaps = 49/589 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++A L+ S Q R++H +L+ VL ++ Y K G + A FD M
Sbjct: 50 SHASLLLRLQSCPDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGM 109
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGSVCLG 155
P+RN +W A+I G + ++A++++ M+ G V FT+ +IKAC+ LG+V G
Sbjct: 110 PRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQG 169
Query: 156 RQL----HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
R++ A + ++ Q AL+ M+ K + +ARNVF + +D+ +W +MI
Sbjct: 170 RKVWEMVEADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGG 229
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------------- 249
G LE + FN M G + + I +V SAC
Sbjct: 230 TVHSGNWLEVVDLFNHMRSEG-FGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASG 288
Query: 250 ------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
A LF +S D+ SW++LI G + + N ++SLF EM
Sbjct: 289 DIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMI 348
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ P+ T+ S+L C+ L L + G ++H + I+ G + + V +A++ +Y+K ++
Sbjct: 349 SLGINPNSSTLASIL-PCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLI 407
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
A +F L + D WNS++A + ++ F + +KPDH+T V+
Sbjct: 408 RVAETIF-WLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPL 466
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
C + L +LH Y+ K + V N L+D+Y KCG L A+++F M + V++
Sbjct: 467 CNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTY 526
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
+ LI + + D+AL F M+ G++P+ VT V +L+ CSH GL+++GLHLY M +
Sbjct: 527 NILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLH 586
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+Y I P +EH SC+VDL +R G + EA F++ MA + +I V LLA+
Sbjct: 587 DYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAA 635
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 137/511 (26%), Positives = 229/511 (44%), Gaps = 48/511 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHD--- 59
N + L ++EAL + N+ ++ + TY +I AC++L ++ GRKV +
Sbjct: 118 NAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVE 177
Query: 60 -HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
I +P+V +Q +++M+ KCG L++AR F+ M R++ +WTAMI G +
Sbjct: 178 ADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWL 237
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
+ + L+ M G ++I AC G + +G LH +KS + NAL+
Sbjct: 238 EVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALV 297
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
MY K + A +F KDV SW S+I +S+ G ++ F EM+ G PN
Sbjct: 298 DMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLG-INPNS 356
Query: 239 FIFGSVFSACS----------------------------------------NFARILFNE 258
S+ S A +F
Sbjct: 357 STLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWL 416
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
DLA WN+++AG A + ++ A ++ L PD +TV S+L C L QG
Sbjct: 417 TLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQG 476
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
++H+Y+IK +S V NA+L MY KC L A VF +L ++V++N +I++ +
Sbjct: 477 KELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVF-QLMTERNTVTYNILISSFGK 535
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL-HCYITKTGLAFDVF 437
HN ++ F M I PD +TF ++ C+ ++ L H + ++ +
Sbjct: 536 HNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKE 595
Query: 438 VMNGLMDIYIKCGSLGSARKLF-NFMENPDV 467
+ ++D+Y +CG L A N E P++
Sbjct: 596 HYSCIVDLYSRCGKLDEAWCFMSNMAEEPEI 626
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 181/422 (42%), Gaps = 54/422 (12%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A +ISAC LQ+G +H + S D+ + N +++MY KCG +E A F
Sbjct: 259 ATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNS 318
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
++VVSW+++I G SQN N ++ L+ +M+ G+ P T SI+ S L + G+++
Sbjct: 319 KDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEI 378
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H I+ +ALI +Y+K I A +F KD+ W SM+A ++ GY
Sbjct: 379 HCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYS 438
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------------------------- 250
A C +L +P+ SV C+
Sbjct: 439 DSAFCAL-RLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNA 497
Query: 251 ------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
A+ +F + + ++N LI+ H++ ++A+S F M+ + PD
Sbjct: 498 LLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPD 557
Query: 299 GLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+T +LL C + +G+ + HS + + I+ +Y++C L A
Sbjct: 558 KVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFM 617
Query: 358 KELGKNADSVSWNSIIAACLQHNQAE--ELF--RLFSR--------MLASQIKPDHITFN 405
+ + + ++AAC HN+ + EL R+F + +L S I D ++
Sbjct: 618 SNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILLSNIYADAGMWS 677
Query: 406 DV 407
DV
Sbjct: 678 DV 679
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 142/313 (45%), Gaps = 18/313 (5%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I ST A ++ S L+ ++ G+++H + + + + ++++Y K G + A
Sbjct: 352 INPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAE 411
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F +++ W +M+AG + N + A + + G+ P T S++ C+
Sbjct: 412 TIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHH 471
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ G++LHA+VIK S NAL+ MY K + A+ VF + ++ ++ +I+
Sbjct: 472 MLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILIS 531
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARILFNEID 260
+F K +E +AL F+ M G P++ F ++ S CS+ + +L +
Sbjct: 532 SFGKHNHEDQALSFFDLMKRDG-IAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNI 590
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
SP+ ++ ++ + +EA S M + P+ + LL AC ++ M
Sbjct: 591 SPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEE---PEIDVLGGLLAAC----RVHNRMD 643
Query: 321 VHSYIIKMGFDSN 333
+ + K F+ N
Sbjct: 644 IAELVGKRIFEQN 656
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 174/548 (31%), Positives = 265/548 (48%), Gaps = 51/548 (9%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
I++ Y K G+L AR FD +R VV+WT MI S++ + DA KL+ +M +SG P
Sbjct: 80 IISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPD 139
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
T+ +++ C+ L Q HA ++K H + N L+ Y K + AR +F
Sbjct: 140 YVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFL 199
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA-------- 247
+ D S+ MI ++ G EA+ F EM + G ++P++F F +V SA
Sbjct: 200 EMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLG-FKPSDFTFAAVISASVGLDDTA 258
Query: 248 --------------------------------CSNFARILFNEIDSPDLASWNALIAGVA 275
C N R LFNE+ D S+N +I A
Sbjct: 259 FGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYA 318
Query: 276 SHSNANEAMSLFSEMR----DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
E++ LF E++ DR+ P ++L L L G Q+H+ ++ D
Sbjct: 319 WVGKVKESIDLFQELQFTTFDRKNFP----FPTMLSIAASSLDLQMGRQLHAQVVVSMAD 374
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
+ V N+++ MYAKC A +F L + +V W ++I+A +Q E +LF
Sbjct: 375 PDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRS-TVPWTAMISANVQRGLHENGLKLFYE 433
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M + + D TF V+ A A +AS+ + QLH + ++G +V+ L+D+Y C S
Sbjct: 434 MRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCAS 492
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+ A K F M +VV+W++L+ YAQ G G LK F M G P+ V+ + +LTA
Sbjct: 493 IKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTA 552
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
CSH LVEEGL + M Y + P REH + +VD L R+G EAE + QM + D +
Sbjct: 553 CSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEI 612
Query: 572 VWKSLLAS 579
VW S+L S
Sbjct: 613 VWTSVLNS 620
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 177/393 (45%), Gaps = 6/393 (1%)
Query: 188 LDARNVFSGIARKDVTS-WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+DAR V +G +TS + MI S+ G +A ++M + ++ + I G V S
Sbjct: 30 IDARIVKTGF--DPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDIIISGYVKS 87
Query: 247 ACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
AR +F++ D + +W +I + + +A LF+EM PD +T +LL
Sbjct: 88 GNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLL 147
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
C + Q H+ I+K+G N VCN +L Y K L +A +F E+ DS
Sbjct: 148 TGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMC-GWDS 206
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
VS+N +I + EE LF M KP TF V+ A + Q+H +
Sbjct: 207 VSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGF 266
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
+ KT +VFV N +D Y K + RKLFN M D VS++ +I YA G E+
Sbjct: 267 VVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKES 326
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
+ LF ++ +L+ + ++ G L+ + P + +VD
Sbjct: 327 IDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMA-DPDFRVSNSLVD 385
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ A+ G EA+ +++ + V W +++++
Sbjct: 386 MYAKCGKFEEADRIFLRLSSRS-TVPWTAMISA 417
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 161/398 (40%), Gaps = 53/398 (13%)
Query: 30 NIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
N+ +PS T+A +ISA L G+++H ++ + +V + N L+ Y K +
Sbjct: 234 NLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVN 293
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
+ R F++MP+ + VS+ +I + + ++I L+ ++ + F F +++ +
Sbjct: 294 EVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAA 353
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
+ +GRQLHA V+ S N+L+ MY K + +A +F ++ + W +
Sbjct: 354 SSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTA 413
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL------------ 255
MI+A + G L F EM ++ F V A +N A IL
Sbjct: 414 MISANVQRGLHENGLKLFYEM-RRANVSADQATFACVLKASANLASILLGKQLHSCVIRS 472
Query: 256 ---------------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
F E+ ++ +WNAL++ A + + + F
Sbjct: 473 GFMNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFE 532
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
EM PD ++ +L AC + +G++ Y M N+ T A
Sbjct: 533 EMIMSGYQPDSVSFLCILTACSHCRLVEEGLK---YFNDMSGVYNLAPKREHYT--AMVD 587
Query: 349 VLC------NALLVFKELGKNADSVSWNSIIAACLQHN 380
LC A + ++ D + W S++ +C H
Sbjct: 588 ALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHK 625
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 163/515 (31%), Positives = 251/515 (48%), Gaps = 45/515 (8%)
Query: 107 MIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE 166
MI G + A+ Y ML+ G P +FTF ++K C+ LG + GR H VIK
Sbjct: 78 MIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLG 137
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
+ N+L+A Y K + DA VF G+ +D+ +W +M+ + G AL F
Sbjct: 138 LEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQ 197
Query: 227 EM------------------------------------LHHGAYQPNEFIFGS----VFS 246
EM + HG Q + G+ ++
Sbjct: 198 EMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQ--DIKVGTSLLDMYC 255
Query: 247 ACSN--FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
C +AR +F + + +WN +I G A + +EA F +MR L + +T +
Sbjct: 256 KCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAIN 315
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
LL AC + G VH Y+++ F +V + A+L MY K + ++ +F ++ N
Sbjct: 316 LLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIA-NK 374
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
VSWN++IAA + E LF +L + PD+ T + V+ A + SL Q+H
Sbjct: 375 TLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIH 434
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
YI G A + +MN ++ +Y + G + ++R++F+ M + DV+SW+++I+GYA G G
Sbjct: 435 SYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGK 494
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV 544
AL++F M+ G+ PN T V VLTACS GLV+EG + +M EYG+IP EH C+
Sbjct: 495 TALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCM 554
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
DLL R G + E FI M D VW SLL +
Sbjct: 555 TDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTA 589
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 216/493 (43%), Gaps = 61/493 (12%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP T+ ++ C+ L L GR H ++ + DV N ++ Y K G +EDA
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD MP R++V+W M+ G N + A+ + +M + + Q II A L +
Sbjct: 164 VFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDA--LEVQHDSVGIIAA---LAA 218
Query: 152 VCL------GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
CL G+++H +VI+ + +L+ MY K + AR+VF+ + + V +W
Sbjct: 219 CCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTW 278
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHG--------------------------------- 232
MI ++ EA F +M G
Sbjct: 279 NCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVR 338
Query: 233 -AYQPNEFIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
+ P+ + ++ ++ +F +I + L SWN +IA EA++L
Sbjct: 339 RQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITL 398
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
F E+ ++ L PD T+ +++ A + +L Q+HSYII +G+ N + NA+L MYA+
Sbjct: 399 FLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYAR 458
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
+ + +F ++ + D +SWN++I H Q + +F M + ++P+ TF
Sbjct: 459 SGDVVASREIFDKM-VSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVS 517
Query: 407 VMGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-- 463
V+ AC+ + E + + + G+ + + D+ G G R++ F+E
Sbjct: 518 VLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDL---LGREGDLREVLQFIESM 574
Query: 464 --NPDVVSWSSLI 474
+P W SL+
Sbjct: 575 PIDPTSRVWGSLL 587
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 177/398 (44%), Gaps = 50/398 (12%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A L + C + S+Q G+++H +++ + D+ + +L+MY KCG + AR F MP
Sbjct: 214 AALAACCLEVSSMQ-GKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPL 272
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
R VV+W MI G + N + ++A ++QM G+ T +++ AC+ S GR +
Sbjct: 273 RTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSV 332
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H +V++ + H++ + AL+ MY K ++ + +F IA K + SW +MIAA+
Sbjct: 333 HGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMY 392
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSA---------CSNF------------------ 251
EA+ F E+L+ Y P+ F +V A C
Sbjct: 393 TEAITLFLELLNQPLY-PDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNA 451
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
+R +F+++ S D+ SWN +I G A H A+ +F EM+ L P+
Sbjct: 452 VLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPN 511
Query: 299 GLTVHSLLCAC-IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
T S+L AC + L M + + + G + + + + L L
Sbjct: 512 ESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFI 571
Query: 358 KELGKNADSVSWNSIIAACLQHNQ-------AEELFRL 388
+ + + S W S++ A N AE +F+L
Sbjct: 572 ESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQL 609
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 122/219 (55%), Gaps = 1/219 (0%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+++ T L++AC+ S GR VH +++ + P VVL+ +L MYGK G +E +
Sbjct: 306 LQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSE 365
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F K+ + +VSW MIA +AI L++++L + P FT +++ A LG
Sbjct: 366 KIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLG 425
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
S+ RQ+H+++I + + + NA++ MY + ++ +R +F + KDV SW +MI
Sbjct: 426 SLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIM 485
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
++ G AL F+EM ++G QPNE F SV +ACS
Sbjct: 486 GYAIHGQGKTALEMFDEMKYNG-LQPNESTFVSVLTACS 523
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 154/325 (47%), Gaps = 10/325 (3%)
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT-LYQ 317
+ PD N +I G A A++ + M + PD T ++ C RL L +
Sbjct: 67 VRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTF-PVVVKCCARLGGLDE 125
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G H +IK+G + +V CN+++ YAK ++ +A VF + D V+WN+++ +
Sbjct: 126 GRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVR-DIVTWNTMVDGYV 184
Query: 378 QHNQAEELFRLFSRML-ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
+ F M A +++ D + + AC S ++H Y+ + GL D+
Sbjct: 185 SNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDI 244
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
V L+D+Y KCG + AR +F M VV+W+ +I GYA DEA F +MR+
Sbjct: 245 KVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAE 304
Query: 497 GVSPNLVTLVGVLTACSHV--GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCV 554
G+ +VT + +L AC+ L +H Y + +P + ++++ + G V
Sbjct: 305 GLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQ---FLPHVVLETALLEMYGKVGKV 361
Query: 555 HEAEDFINQMACDADIVVWKSLLAS 579
+E ++A + +V W +++A+
Sbjct: 362 ESSEKIFGKIA-NKTLVSWNNMIAA 385
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 109/214 (50%), Gaps = 9/214 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N+ +++ + +Y EA+ + N + T + ++ A L SL+ R++H +I+
Sbjct: 380 NNMIAAYMYKEMYTEAITLF-LELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYII 438
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ ++ N +L+MY + G + +R FDKM ++V+SW MI G + + Q A++
Sbjct: 439 GLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALE 498
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ +M +G+ P + TF S++ ACS G V G +H +++ E+G +I Q T
Sbjct: 499 MFDEMKYNGLQPNESTFVSVLTACSVSGLVDEG-WMHFNLMLQEYG--MIPQIEHYGCMT 555
Query: 183 K-FDRILDARNVFSGIARK--DVTS--WGSMIAA 211
R D R V I D TS WGS++ A
Sbjct: 556 DLLGREGDLREVLQFIESMPIDPTSRVWGSLLTA 589
>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
Length = 879
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 187/591 (31%), Positives = 289/591 (48%), Gaps = 56/591 (9%)
Query: 38 YAGLISACSSLRSL-QLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+ ++ ACS+ L + GR++H + + + D + +L+MYGKC S+EDAR FD +
Sbjct: 102 FVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGI 161
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG------ 150
+ VV W AMI +Q AI+++ ML GV + TF ++ ACS L
Sbjct: 162 RHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAK 221
Query: 151 --SVCLGRQLHAHVIK------------------------SEHGSHLIAQNALIAMYTKF 184
+C+ + H H+ S H LI A+I YT+
Sbjct: 222 LVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSRHRLELILATAMITQYTQR 281
Query: 185 DRILDARNVFS-----GIARKDVTSWGSMIAAFSKLGYELEALCH-------FNEMLHHG 232
+R +A +F G+ + + A G E + H F+ ++ G
Sbjct: 282 ERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAG 341
Query: 233 AYQPNEFIFGSVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
N I +++ C + A +F + D+ SWN +IA HS EA+ L M
Sbjct: 342 ----NALI--NMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLM 395
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ + D ++ + L C L +G +HS+I++ G ++V + NAIL MY C
Sbjct: 396 QLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKST 455
Query: 351 CNALLVFKELGKNADSVSWNSIIAA-CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+A VF+ + K D VSWN++I A Q + E LF +M PD I+F +
Sbjct: 456 DDASRVFRAM-KVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALS 514
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
ACA ASL LH I +TGL ++ V N ++++Y K G+L ARK+F M PDV+S
Sbjct: 515 ACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVIS 574
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+ +I +AQ G D+ L+ F RM G PN VT V V++ACSH GLV++G+ L+ +
Sbjct: 575 WNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLL 634
Query: 530 NEYGII-PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+++ I P EH C+VDL+ARAG + AE FI D V+ ++L +
Sbjct: 635 HDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGA 685
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 170/586 (29%), Positives = 276/586 (47%), Gaps = 49/586 (8%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
YA L+ + RSL LG++VH I S + + ++ MY CGSL DA+ FD+MP
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC-LGR 156
++ ++W +I Q A+ L+ M GV P F +++ ACS + GR
Sbjct: 61 VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++H + + S L+ MY K + DAR VF GI K V W +MI A+++
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--------------------------SN 250
+ +A+ F ML G + F V AC S+
Sbjct: 181 HHEQAIQVFYAMLLEGV-KAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSS 239
Query: 251 FARILFNEIDS---------------PDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
FA L N S +L A+I +EA+ LF M +
Sbjct: 240 FATALVNFYGSCGDLEQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVMLLEGV 299
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
D + ++L AC G L +G +H ++ ++ FD +V NA++ MY KC L A+
Sbjct: 300 KLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVE 359
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF+ + ++ D +SWN+IIAA QH+Q E L M +K D I+F + + CA
Sbjct: 360 VFRSM-QHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSE 418
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+L +H +I ++G+ DV + N ++D+Y C S A ++F M+ D VSW+++I
Sbjct: 419 ALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMIT 478
Query: 476 GY-AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYG 533
Y AQ EAL LF +M+ G P++++ V L+AC+ + EG L+ RI E G
Sbjct: 479 AYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRET--G 536
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + V+++ A++G + A +M D++ W ++++
Sbjct: 537 LESNMTVANAVLNMYAKSGTLVLARKMFGKMPL-PDVISWNGMISA 581
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 119/215 (55%), Gaps = 2/215 (0%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++ + C++ +L GR +H I+ S + DV+L N IL+MYG C S +DA F M
Sbjct: 406 SFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAM 465
Query: 97 PQRNVVSWTAMI-AGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
R+ VSW AMI A +Q ++A+ L+ QM G MP +F + + AC+ S+ G
Sbjct: 466 KVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEG 525
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ LH + ++ S++ NA++ MY K ++ AR +F + DV SW MI+AF++
Sbjct: 526 KLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQH 585
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
G+ + L F M H G PN+ F SV SACS+
Sbjct: 586 GHADQVLRFFRRMNHEGKL-PNDVTFVSVVSACSH 619
>gi|15236431|ref|NP_192561.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208454|sp|Q9SUF9.1|PP305_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g08210
gi|5262194|emb|CAB45791.1| putative protein [Arabidopsis thaliana]
gi|7267461|emb|CAB81157.1| putative protein [Arabidopsis thaliana]
gi|332657209|gb|AEE82609.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 686
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 163/608 (26%), Positives = 293/608 (48%), Gaps = 74/608 (12%)
Query: 45 CSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSW 104
C +++ + G + H++ +V + N++++MY L DA FD+M +RN+V+W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 105 TAMIAGCSQNYQENDAIKLYIQMLQSGV-MPGQFTFGSIIKACSGLGSVCLGRQLHAHVI 163
T M++G + + + N AI+LY +ML S +F + +++KAC +G + LG ++ +
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 164 KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK----------------------- 200
K ++ N+++ MY K R+++A + F I R
Sbjct: 135 KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVT 194
Query: 201 --------DVTSWGSMIAAFSKLG----------YELEAL-------------CHFNEML 229
+V SW +I+ F G + E L C F +L
Sbjct: 195 LFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLL 254
Query: 230 HHG----------AYQPNEFIFGSVFSACSN-----FARILFNEID---SPDLASWNALI 271
G + + F ++ SN +A +F++ + +A WN+++
Sbjct: 255 TMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
+G + A+ L ++ +L D T+ L CI + L G+QVHS ++ G++
Sbjct: 315 SGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYE 374
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
+ V + ++ ++A + +A +F L N D ++++ +I C++ F LF
Sbjct: 375 LDYIVGSILVDLHANVGNIQDAHKLFHRL-PNKDIIAFSGLIRGCVKSGFNSLAFYLFRE 433
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
++ + D ++++ C+ +ASL Q+H K G + L+D+Y+KCG
Sbjct: 434 LIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGE 493
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+ + LF+ M DVVSW+ +I+G+ Q G +EA + F +M ++G+ PN VT +G+L+A
Sbjct: 494 IDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSA 553
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
C H GL+EE M++EYG+ P EH CVVDLL +AG EA + IN+M + D
Sbjct: 554 CRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKT 613
Query: 572 VWKSLLAS 579
+W SLL +
Sbjct: 614 IWTSLLTA 621
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 139/514 (27%), Positives = 223/514 (43%), Gaps = 81/514 (15%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD--- 94
Y+ ++ AC + +QLG V++ I + DVVL N +++MY K G L +A F
Sbjct: 110 YSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEIL 169
Query: 95 ----------------------------KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
+MPQ NVVSW +I+G A++ ++
Sbjct: 170 RPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVR 228
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M + G++ F +KACS G + +G+QLH V+KS S A +ALI MY+
Sbjct: 229 MQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGS 288
Query: 187 ILDARNVFSG---IARKDVTSWGSMIAAFSKLGYELEA------------LCHFNEMLHH 231
++ A +VF V W SM++ F + E EA LC F+
Sbjct: 289 LIYAADVFHQEKLAVNSSVAVWNSMLSGF-LINEENEAALWLLLQIYQSDLC-FDSYTLS 346
Query: 232 GAYQ-----------------------PNEFIFGSVFSAC-SNFARI-----LFNEIDSP 262
GA + ++I GS+ +N I LF+ + +
Sbjct: 347 GALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNK 406
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ +++ LI G + A LF E+ L D V ++L C +L G Q+H
Sbjct: 407 DIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIH 466
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
IK G++S A++ MY KC + N +++F + + D VSW II Q+ +
Sbjct: 467 GLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLER-DVVSWTGIIVGFGQNGRV 525
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV-TQLHCYITKTGLAFDVFVMNG 441
EE FR F +M+ I+P+ +TF ++ AC LE + L ++ GL +
Sbjct: 526 EEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYC 585
Query: 442 LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + G A +L N M PD W+SL+
Sbjct: 586 VVDLLGQAGLFQEANELINKMPLEPDKTIWTSLL 619
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/508 (23%), Positives = 212/508 (41%), Gaps = 76/508 (14%)
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
++ C + + G + AHVIK ++ N +I+MY F + DA VF ++ +++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL------- 255
+W +M++ ++ G +A+ + ML NEF++ +V AC I
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 256 ---------------------------------FNEIDSPDLASWNALIAGVASHSNANE 282
F EI P SWN LI+G +E
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 283 AMSLFSEMR-----------------------------DRE-LLPDGLTVHSLLCACIGR 312
A++LF M RE L+ DG + L AC
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFG 251
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF--KELGKNADSVSWN 370
L G Q+H ++K G +S+ +A++ MY+ C L A VF ++L N+ WN
Sbjct: 252 GLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWN 311
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
S+++ L + + E L ++ S + D T + + C +L + Q+H + +
Sbjct: 312 SMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVS 371
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
G D V + L+D++ G++ A KLF+ + N D++++S LI G + G A LF
Sbjct: 372 GYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLF 431
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI-MENEYGIIPTREHCSCVVDLLA 549
+ LG+ + + +L CS + + G ++ + ++ Y P + +VD+
Sbjct: 432 RELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVT--ATALVDMYV 489
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLL 577
+ G + + M + D+V W ++
Sbjct: 490 KCGEIDNGVVLFDGM-LERDVVSWTGII 516
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 169/346 (48%), Gaps = 18/346 (5%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T +G + C + +L+LG +VH +++S + D ++ + +++++ G+++DA F ++
Sbjct: 344 TLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRL 403
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P +++++++ +I GC ++ + A L+ ++++ G+ QF +I+K CS L S+ G+
Sbjct: 404 PNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGK 463
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H IK + S + AL+ MY K I + +F G+ +DV SW +I F + G
Sbjct: 464 QIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNG 523
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-----ARILFNEIDS-----PDLAS 266
EA +F++M++ G +PN+ F + SAC + AR + S P L
Sbjct: 524 RVEEAFRYFHKMINIGI-EPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEH 582
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
+ ++ + EA L ++M L PD SLL AC + ++
Sbjct: 583 YYCVVDLLGQAGLFQEANELINKM---PLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLL 639
Query: 327 KMGFDSNVPVCNAILTMYAKCSV---LCNALLVFKELGKNADSVSW 369
K GF + V ++ YA + L K+LG +SW
Sbjct: 640 K-GFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAKESGMSW 684
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 160/513 (31%), Positives = 265/513 (51%), Gaps = 25/513 (4%)
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
V N +++ Y + G E ARM FD+MP+R++VSW MI G +N A +L+ +M +
Sbjct: 91 VSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPER 150
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
V ++ +I+ + G V R++ + + ++ NAL++ Y + ++ +A
Sbjct: 151 DVC----SWNTILSGYAQNGCVDDARRVFDRMPEKND----VSWNALLSAYVQNSKLEEA 202
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
+F + SW ++ F K +EA F+ M N I G + +
Sbjct: 203 CVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEID 262
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
AR LF+E D+ +W A+++G + EA LF M +R + ++ +++L +
Sbjct: 263 EARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER----NEVSWNAMLAGYV 318
Query: 311 GRLTLYQGMQVHSYIIKMGFD----SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
QG +V + K FD NV N ++T YA+C + A +F ++ K D
Sbjct: 319 ------QGERVE--MAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR-DP 369
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
VSW ++IA Q + E RLF M + + +F+ + CA + +LE+ QLH
Sbjct: 370 VSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 429
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
+ K G FV N L+ +Y KCGS+ A LF M D+VSW+++I GY++ G G+EA
Sbjct: 430 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEA 489
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
L+ F M+ G+ P+ T+V VL+ACSH GLV++G + M +YG+ P +H +C+VD
Sbjct: 490 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVD 549
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
LL RAG + EA + + M + D +W +LL +
Sbjct: 550 LLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGA 582
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 189/441 (42%), Gaps = 42/441 (9%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
+ DV N IL+ Y + G ++DAR FD+MP++N VSW A+++ QN + +A L+
Sbjct: 149 ERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGS 208
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
++ G +K + RQ S +++ N +I Y +
Sbjct: 209 RENWALVSWNCLLGGFVKK----KKIVEARQF----FDSMKVRDVVSWNTIITGYAQNGE 260
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
I +AR +F DV +W +M++ + + EA F+ M N + G V
Sbjct: 261 IDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQG 320
Query: 247 ACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP--------- 297
A+ LF+ + ++++WN +I G A +EA +LF +M R+ +
Sbjct: 321 ERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYS 380
Query: 298 ----------------------DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
+ + S L C + L G Q+H ++K G+++
Sbjct: 381 QSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCF 440
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
V NA+L MY KC + A +FKE+ D VSWN++IA +H EE R F M
Sbjct: 441 VGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHGFGEEALRFFESMKRE 499
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
+KPD T V+ AC+ ++ Q H G+ + ++D+ + G L
Sbjct: 500 GLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEE 559
Query: 455 ARKLFNFME-NPDVVSWSSLI 474
A L M PD W +L+
Sbjct: 560 AHNLMKNMPFEPDAAIWGTLL 580
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 186/438 (42%), Gaps = 77/438 (17%)
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEID 260
D+ W I+++ + G EAL F M + N I G + + AR+LF+E+
Sbjct: 58 DIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMP 117
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDREL------------------------- 295
DL SWN +I G + N +A LF M +R++
Sbjct: 118 ERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDR 177
Query: 296 LPD--GLTVHSLLCACIGRLTLYQ---------------------GMQVHSYII--KMGF 330
+P+ ++ ++LL A + L + G I+ + F
Sbjct: 178 MPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFF 237
Query: 331 DS----NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
DS +V N I+T YA+ + A +F E D +W ++++ +Q+ EE
Sbjct: 238 DSMKVRDVVSWNTIITGYAQNGEIDEARQLFDE-SPVHDVFTWTAMVSGYIQNRMVEEAR 296
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
LF RM + + +++N ++ + +EM +L + +V N ++ Y
Sbjct: 297 ELFDRM----PERNEVSWNAMLAGYVQGERVEMAKELFDVMP----CRNVSTWNTMITGY 348
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
+CG + A+ LF+ M D VSW+++I GY+Q G EAL+LF M G N +
Sbjct: 349 AQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFS 408
Query: 507 GVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVD-----LLARAGCVHEAEDF 560
L+ C+ V +E G L+ R+++ Y C V + + G + EA D
Sbjct: 409 SALSTCADVVALELGKQLHGRLVKGGY-------ETGCFVGNALLLMYCKCGSIEEANDL 461
Query: 561 INQMACDADIVVWKSLLA 578
+MA DIV W +++A
Sbjct: 462 FKEMA-GKDIVSWNTMIA 478
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 101/183 (55%), Gaps = 4/183 (2%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
R+ S+++ +S C+ + +L+LG+++H ++ + + N +L MY KCGS+E+A
Sbjct: 401 RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 460
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
F +M +++VSW MIAG S++ +A++ + M + G+ P T +++ ACS G
Sbjct: 461 LFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGL 520
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSM 208
V GRQ + H + ++G +Q+ ++ + + + +A N+ + D WG++
Sbjct: 521 VDKGRQ-YFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTL 579
Query: 209 IAA 211
+ A
Sbjct: 580 LGA 582
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 358 KELGKNADS--VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
K L K+ DS WN I++ ++ + E R+F RM + +++N ++ +
Sbjct: 49 KPLPKSGDSDIKEWNVAISSYMRTGRCSEALRVFKRM----PRWSSVSYNAMISGYLRNG 104
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
E+ L + + D+ N ++ Y++ +LG AR+LF M DV SW++++
Sbjct: 105 EFELARMLFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILS 160
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
GYAQ GC D+A ++F RM N V+ +L+A +EE L+ EN + ++
Sbjct: 161 GYAQNGCVDDARRVFDRM----PEKNDVSWNALLSAYVQNSKLEEACVLFGSREN-WALV 215
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+C++ + + EA F + M D+V W +++
Sbjct: 216 S----WNCLLGGFVKKKKIVEARQFFDSMKV-RDVVSWNTIIT 253
>gi|115436506|ref|NP_001043011.1| Os01g0357800 [Oryza sativa Japonica Group]
gi|53791613|dbj|BAD52960.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|53792343|dbj|BAD53077.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532542|dbj|BAF04925.1| Os01g0357800 [Oryza sativa Japonica Group]
Length = 804
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 164/588 (27%), Positives = 288/588 (48%), Gaps = 46/588 (7%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
E ++ Y + N I T ++ +C+ L++L LG+ VH L + + + +
Sbjct: 129 EVIILYKRLKLN-QIGFNGKTITFVMKSCTELKNLYLGKGVHADSLKLALSGNKFVGSSL 187
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN--DAIKLYIQMLQSGVMP 134
+ +Y K D+R F+++ +++V++T+MI G S+ +A ++ MLQ+ +
Sbjct: 188 IGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWNAFEIATDMLQNNLEV 247
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG-SHLIAQNALIAMYTKFDRILDARNV 193
+ T S+++ LG++ G+ LH + I+ G S I + +++ YT+ A V
Sbjct: 248 NRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQSAATV 307
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-- 251
++ V SW ++++ ++ G A+ + MLH P+ F +V SAC+
Sbjct: 308 LQN-SKGTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAELCY 366
Query: 252 --------------------------------------ARILFNEIDSPDLASWNALIAG 273
++ LF+++ D+ S+NA+I G
Sbjct: 367 FCFAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKYLFDQLIIKDVVSYNAMIYG 426
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
+ ANEA SL + M + PD TV SLL A + L +G +H + I+ GF S+
Sbjct: 427 YLQNDMANEATSLLNYMMAEGVAPDFATVLSLLAAFADQRDLVRGRWIHGFAIRHGFCSD 486
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
V V N IL MY+ C + A +F L K + VSW +++ CL + A+E+ +LF M
Sbjct: 487 VDVENQILYMYSACGKIAAARAIFDSLEKK-NLVSWTAMMKGCLSNGHADEVVQLFQVMQ 545
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
KPD ++ + A + + L + Q+HC++ ++ L D N L+ Y KCG L
Sbjct: 546 KYGEKPDSVSLVTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITANSLISAYAKCGKLD 605
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
+ LF ++ ++ +W+++I YA G L++F +M + P+ +T VLTACS
Sbjct: 606 LSAGLFFSLKYRNLDTWNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVLTACS 665
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
H GLV++G ++ M + Y ++P EH C+VDLL RAG + + FI
Sbjct: 666 HAGLVKDGWRIFNSMTSVYSVLPQEEHYGCMVDLLGRAGHLEDGYKFI 713
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 215/478 (44%), Gaps = 73/478 (15%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A L C+ +R L +K+H ++ DV+L + IL+ Y G+L ++R+ F K+
Sbjct: 52 ALLFQGCADVRFL---KKIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKIVN 108
Query: 99 RNVVSW-TAMIAGCSQNYQENDAIKLY--IQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
++ W +AM+ Y E + I LY +++ Q G TF ++K+C+ L ++ LG
Sbjct: 109 DDISLWNSAMVDYFRAGYPE-EVIILYKRLKLNQIGFNGKTITF--VMKSCTELKNLYLG 165
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ +HA +K + ++LI +Y+KF + D+R VF I KD+ ++ SMI +S
Sbjct: 166 KGVHADSLKLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYS-- 223
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVA 275
++ D +WNA
Sbjct: 224 --------------------------------------------ETVDSIAWNAF----- 234
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD-SNV 334
+ ++M L + +T+ SLL L +G +H Y I+ S+
Sbjct: 235 ---------EIATDMLQNNLEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDD 285
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML- 393
+ +I+ Y +C +A V + SWN++++ + Q+ + ML
Sbjct: 286 ILETSIVNFYTRCGAYQSAATVLQN--SKGTVASWNALLSGLNRAGQSFNAIQYLPVMLH 343
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
++ PD +TF +V+ ACA++ +H Y + + DV + L+++Y KC +
Sbjct: 344 EHKVTPDSVTFANVLSACAELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVM 403
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
++ LF+ + DVVS++++I GY Q +EA L M + GV+P+ T++ +L A
Sbjct: 404 RSKYLFDQLIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPDFATVLSLLAA 461
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 209/442 (47%), Gaps = 51/442 (11%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDH-ILLSKCQPDVVLQ 73
+N +A D QNN + + T L+ +L +LQ G+ +H + I + D +L+
Sbjct: 231 WNAFEIATDMLQNN--LEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILE 288
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSGV 132
I+N Y +CG+ + A + V SW A+++G ++ Q +AI+ ML + V
Sbjct: 289 TSIVNFYTRCGAYQSAATVLQN-SKGTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKV 347
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
P TF +++ AC+ L C +HA+ I+ ++ ALI +YTK R++ ++
Sbjct: 348 TPDSVTFANVLSACAELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKY 407
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN--------------- 237
+F + KDV S+ +MI + + EA N M+ G P+
Sbjct: 408 LFDQLIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGV-APDFATVLSLLAAFADQR 466
Query: 238 -----EFIFG------------------SVFSACSNF--ARILFNEIDSPDLASWNALIA 272
+I G ++SAC AR +F+ ++ +L SW A++
Sbjct: 467 DLVRGRWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAARAIFDSLEKKNLVSWTAMMK 526
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM-QVHSYIIKMGFD 331
G S+ +A+E + LF M+ PD +++ + + A + L G+ Q+H ++ + +
Sbjct: 527 GCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQA-VSDLGHLNGLKQIHCFVYRSLLE 585
Query: 332 SNVPVCNAILTMYAKCSVL-CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+ N++++ YAKC L +A L F +N D +WN++I+A H + +F
Sbjct: 586 KDKITANSLISAYAKCGKLDLSAGLFFSLKYRNLD--TWNAMISAYAMHGFHINVLEMFK 643
Query: 391 RMLASQIKPDHITFNDVMGACA 412
+M I+PD +TF+ V+ AC+
Sbjct: 644 QMEEENIQPDELTFSTVLTACS 665
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 133/268 (49%), Gaps = 6/268 (2%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
+R++F +I + D++ WN+ + E + L+ ++ ++ +G T+ ++ +C
Sbjct: 99 SRLVFQKIVNDDISLWNSAMVDYFRAGYPEEVIILYKRLKLNQIGFNGKTITFVMKSCTE 158
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
LY G VH+ +K+ N V ++++ +Y+K S ++ VF+E+ N D V++ S
Sbjct: 159 LKNLYLGKGVHADSLKLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEI-INKDIVAYTS 217
Query: 372 IIAACLQ--HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
+I + + A F + + ML + ++ + +T ++ + +L+ LHCY +
Sbjct: 218 MITGYSETVDSIAWNAFEIATDMLQNNLEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIR 277
Query: 430 TGLAF-DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
+ D + +++ Y +CG+ SA + + V SW++L+ G + G A++
Sbjct: 278 RAIGVSDDILETSIVNFYTRCGAYQSAATVLQNSKGT-VASWNALLSGLNRAGQSFNAIQ 336
Query: 489 LFTRM-RSLGVSPNLVTLVGVLTACSHV 515
M V+P+ VT VL+AC+ +
Sbjct: 337 YLPVMLHEHKVTPDSVTFANVLSACAEL 364
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 124/263 (47%), Gaps = 9/263 (3%)
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
++H+ + G +V + + IL+ YA L + LVF+++ N D WNS + +
Sbjct: 66 KIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKI-VNDDISLWNSAMVDYFRA 124
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
EE+ L+ R+ +QI + T VM +C ++ +L + +H K L+ + FV
Sbjct: 125 GYPEEVIILYKRLKLNQIGFNGKTITFVMKSCTELKNLYLGKGVHADSLKLALSGNKFVG 184
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF--GCGDEALKLFTRMRSLG 497
+ L+ +Y K +R +F + N D+V+++S+I GY++ A ++ T M
Sbjct: 185 SSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWNAFEIATDMLQNN 244
Query: 498 VSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
+ N VTLV +L ++G ++EG LH Y I G+ S +V+ R G
Sbjct: 245 LEVNRVTLVSLLQIAGNLGALQEGKSLHCYSI-RRAIGVSDDILETS-IVNFYTRCGAYQ 302
Query: 556 EAEDFINQMACDADIVVWKSLLA 578
A + + W +LL+
Sbjct: 303 SAATVLQN--SKGTVASWNALLS 323
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 54/101 (53%)
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
A + + ++H + GL +DV + + ++ Y G+L +R +F + N D+ W+S +
Sbjct: 59 ADVRFLKKIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKIVNDDISLWNSAM 118
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
+ Y + G +E + L+ R++ + N T+ V+ +C+ +
Sbjct: 119 VDYFRAGYPEEVIILYKRLKLNQIGFNGKTITFVMKSCTEL 159
>gi|357484133|ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513688|gb|AES95311.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 167/594 (28%), Positives = 299/594 (50%), Gaps = 50/594 (8%)
Query: 29 TNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS-LE 87
++ R +T+A L+ AC++ +G ++H ++ + + + ++ MY K G L
Sbjct: 143 SDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLR 202
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKAC 146
DA F + +R+VV+W MI+G +QN +L+ +M + G+ P + TF S++K C
Sbjct: 203 DALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCC 262
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
S L V Q+H V K ++ ++A++ +Y K + R +F + +KD W
Sbjct: 263 SVLNEVM---QIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWS 319
Query: 207 SMIAAFSKLGYELEALCHFNEMLH-----------------------------HG----- 232
SMI+ ++ EA+ F +M HG
Sbjct: 320 SMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKN 379
Query: 233 AYQPNEFIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNA-NEAMSL 286
+Q + F+ + + ++F + LF+ ID D+ +WN++I A M L
Sbjct: 380 GHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQL 439
Query: 287 FSEMRDRELLP-DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
F E+R L G T+ ++L +C L G Q+HS I+K + V NA++ MY+
Sbjct: 440 FQELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYS 499
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
+C + +A F ++ + DS SW+SII C Q+ + L ML I +
Sbjct: 500 ECKQIDDAFKAFVDIVRKDDS-SWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLP 558
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
+ AC+++ ++ QLH + K+G + DV++ + ++D+Y KCG++ + K+F+ P
Sbjct: 559 LCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKP 618
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
+ V+++++I GYA G +A+++ +++ GV+PN VT + +++ACSH G VEE HL+
Sbjct: 619 NEVTFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEETSHLF 678
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+M ++Y I P EH SC+VD RAG + EA + + D W++LL++
Sbjct: 679 TLMLDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSA 729
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 144/552 (26%), Positives = 252/552 (45%), Gaps = 50/552 (9%)
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
++H +++++ L N +L+ Y K + A FDKMP RNVV+WT +I+ +
Sbjct: 69 QIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYG 128
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+ A +++ M S P + TF +++AC+ +G Q+H +++ A +
Sbjct: 129 SVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGS 188
Query: 176 ALIAMYTK-FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
+L+ MY K D + DA VF G+ +DV +W MI+ F++ G F+EM
Sbjct: 189 SLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGL 248
Query: 235 QPNEFIFGSVFSACS-------------------------------------NFARILFN 257
+P+ F S+ CS + R +F+
Sbjct: 249 KPDRITFASLLKCCSVLNEVMQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFD 308
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
++ D W+++I+G ++ EA++ F +M + + D + S L AC+ L
Sbjct: 309 SMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNT 368
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G+QVH +IK G ++ V + +L +YA L + +F + + D V+WNS+I A
Sbjct: 369 GVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRI-DDKDIVAWNSMILAQA 427
Query: 378 QHNQA----EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
+ Q +LF+ R QI+ T V+ +C K + L Q+H I K+ L
Sbjct: 428 RPGQGCGRCMQLFQELRRTTFLQIQG--ATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLC 485
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
V N L+ +Y +C + A K F + D SWSS+I Q +AL+L M
Sbjct: 486 RHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEM 545
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARA 551
G++ +L ++ACS + + EG LH++ I + G S ++D+ A+
Sbjct: 546 LDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAI---KSGYSCDVYIGSSIIDMYAKC 602
Query: 552 GCVHEAEDFINQ 563
G + E+E ++
Sbjct: 603 GNIEESEKVFDE 614
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 170/344 (49%), Gaps = 20/344 (5%)
Query: 243 SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
S +S SNF A LF+++ + ++ +W LI+ + + ++A +F+ MR + P+
Sbjct: 91 SFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDERPNEN 150
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK-CSVLCNALLVFKE 359
T LL AC R G+Q+H +++ G + ++++ MY K L +AL VF
Sbjct: 151 TFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRVFYG 210
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ-IKPDHITFNDVMGACAKMASLE 418
L + D V+WN +I+ Q+ + RLFS M Q +KPD ITF ++ C + L
Sbjct: 211 LLER-DVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCC---SVLN 266
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
V Q+H + K G DV V + ++D+Y KC + S RK+F+ ME D WSS+I GY
Sbjct: 267 EVMQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYT 326
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
G+EA+ F M V + L L AC + + G+ ++ +M I
Sbjct: 327 MNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLM------IKNG 380
Query: 539 EHCSCVV-----DLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
C V +L A G + + E +++ D DIV W S++
Sbjct: 381 HQNDCFVASVLLNLYASFGELGDVEKLFSRID-DKDIVAWNSMI 423
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 178/392 (45%), Gaps = 45/392 (11%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+++ + + AC + L G +VH ++ + Q D + + +LN+Y G L D
Sbjct: 346 VKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVE 405
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQE-NDAIKLYIQMLQSGVMPGQ-FTFGSIIKACSG 148
F ++ +++V+W +MI ++ Q ++L+ ++ ++ + Q T +++K+C
Sbjct: 406 KLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEK 465
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+ GRQ+H+ ++KS H + NAL+ MY++ +I DA F I RKD +SW S+
Sbjct: 466 DSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSI 525
Query: 209 IAAFSKLGYELEALCHFNEMLHHG----------------------------------AY 234
I + E +AL EML G Y
Sbjct: 526 IGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGY 585
Query: 235 QPNEFIFGSV---FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
+ +I S+ ++ C N + +F+E P+ ++NA+I+G A H A +A+ + S+
Sbjct: 586 SCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSK 645
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAILTMYAKCS 348
+ + P+ +T +L+ AC + + + + ++ K + ++ Y +
Sbjct: 646 LEKNGVAPNHVTFLALMSACSHAGYVEETSHLFTLMLDKYKIKPKSEHYSCLVDAYGRAG 705
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
L A + + K+ +W ++++AC H+
Sbjct: 706 RLEEAYQIVQ---KDGSESAWRTLLSACRNHS 734
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 120/225 (53%), Gaps = 1/225 (0%)
Query: 26 QNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS 85
+ T ++I+ +T ++ +C L GR++H I+ S ++ N +++MY +C
Sbjct: 444 RRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQ 503
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
++DA F + +++ SW+++I C QN E+ A++L +ML G+ ++ I A
Sbjct: 504 IDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISA 563
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
CS L ++ G+QLH IKS + + +++I MY K I ++ VF + + ++
Sbjct: 564 CSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTF 623
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
++I+ ++ G +A+ +++ +G PN F ++ SACS+
Sbjct: 624 NAIISGYAHHGKAQQAIEVLSKLEKNGV-APNHVTFLALMSACSH 667
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 134/268 (50%), Gaps = 8/268 (2%)
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
+ L Q Q+H+ +I + S + N +L+ Y+K S A +F ++ N + V+W ++
Sbjct: 62 IILTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKM-PNRNVVTWTTL 120
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
I++ L++ + F +F+ M S +P+ TF ++ AC + Q+H + + GL
Sbjct: 121 ISSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGL 180
Query: 433 AFDVFVMNGLMDIYIKCG-SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
+ F + L+ +Y+K G L A ++F + DVV+W+ +I G+AQ G +LF+
Sbjct: 181 EREKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFS 240
Query: 492 RM-RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
M G+ P+ +T +L CS ++ E + ++ I+ ++G S +VDL A+
Sbjct: 241 EMWEEQGLKPDRITFASLLKCCS---VLNEVMQIHGIV-YKFGAEVDVVVESAMVDLYAK 296
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLA 578
V + M D VW S+++
Sbjct: 297 CRDVSSCRKIFDSME-KKDNFVWSSMIS 323
>gi|297830924|ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329184|gb|EFH59603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 824
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 166/622 (26%), Positives = 303/622 (48%), Gaps = 56/622 (9%)
Query: 13 NLYNEALVAYDFSQNNTNI-RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
NL +EAL+ Y + + TY+ + AC+ ++L+ G+ VH H++ V
Sbjct: 84 NLPHEALLFYSRMKKTAPFTKCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRV 143
Query: 72 LQNHILNMYGKC----GSLED------ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ N ++NMY C GS D R FD M ++NVV+W +I+ + + +A
Sbjct: 144 VHNSLMNMYVSCLNAPGSELDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEAC 203
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK--SEHGSHLIAQNALIA 179
+ + M++ + P +F ++ A + S+ + ++K E+ L ++ I+
Sbjct: 204 RQFAIMMRMEIKPSPVSFVNVFPAVATSRSIKKANVFYGLMLKLGDEYVKDLFVVSSAIS 263
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY + + +R VF +++ W +MI + + +E++ F E + +E
Sbjct: 264 MYAELGDLESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEV 323
Query: 240 IFGSVFSACSNFARI----------------------------------------LFNEI 259
F SA S ++ +F+ +
Sbjct: 324 TFLLAASAVSGLQQVELGRQFHGFVSKNFRELPIVIINSLMVMYSRCGFVQKSFGVFHSM 383
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
D+ SWN +I+ + +E + L EM+ + D +TV +LL A G
Sbjct: 384 RERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGK 443
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQ 378
Q H ++I+ G + + ++ MYAK ++ + +F+ G D +WNS+I+ Q
Sbjct: 444 QTHGFLIRQGIQFE-GMNSYLIDMYAKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQ 502
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+ EE F +F +ML I+P+ +T ++ AC+++ S+++ QLH + + L +VFV
Sbjct: 503 NGHTEETFLVFRKMLEQNIRPNAVTVASILPACSQVGSVDLGKQLHGFSIRQYLDQNVFV 562
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
+ L+D+Y K G++ A +F+ + + V+++++ILGY Q G G+ A+ LF M+ LG+
Sbjct: 563 ASALVDMYSKAGAIKYAENMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQELGI 622
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAE 558
P+ + V VL+ACS+ GLV+EGL ++ M Y I P+ EH C+ D+L R G V+EA
Sbjct: 623 KPDAIAFVAVLSACSYSGLVDEGLKIFEDMREVYNIQPSSEHYCCITDMLGRVGRVNEAY 682
Query: 559 DFINQMACDADIV-VWKSLLAS 579
+F+ + + +I +W SLL S
Sbjct: 683 EFVKGLGEEGNIAELWGSLLGS 704
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 140/542 (25%), Positives = 251/542 (46%), Gaps = 71/542 (13%)
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP--GQFTFGS 141
G+ + AR FD +P+ V W +I G N ++A+ Y +M ++ +T+ S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSS 112
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT-------------KFDRIL 188
+KAC+ ++ G+ +H H+I+ S + N+L+ MY ++D +
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVV- 171
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF--- 245
R VF + RK+V +W ++I+ + K G EA F M+ +P+ F +VF
Sbjct: 172 --RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRM-EIKPSPVSFVNVFPAV 228
Query: 246 -------------------------------SACSNFA--------RILFNEIDSPDLAS 266
SA S +A R +F+ ++
Sbjct: 229 ATSRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEV 288
Query: 267 WNALIAGVASHSNANEAMSLFSE-MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
WN +I + E++ LF E + +E++ D +T A G + G Q H ++
Sbjct: 289 WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFV 348
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
K + + + N+++ MY++C + + VF + + D VSWN++I+A +Q+ +E
Sbjct: 349 SKNFRELPIVIINSLMVMYSRCGFVQKSFGVFHSM-RERDVVSWNTMISAFVQNGLDDEG 407
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG-LMD 444
L M K D+IT ++ A + + + E+ Q H ++ + G+ F+ MN L+D
Sbjct: 408 LMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFE--GMNSYLID 465
Query: 445 IYIKCGSLGSARKLFN---FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
+Y K G + ++KLF + E D +W+S+I GY Q G +E +F +M + PN
Sbjct: 466 MYAKSGLIRISQKLFEGSGYAER-DQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPN 524
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
VT+ +L ACS VG V+ G L+ +Y + S +VD+ ++AG + AE+
Sbjct: 525 AVTVASILPACSQVGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAENMF 583
Query: 562 NQ 563
+Q
Sbjct: 584 SQ 585
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 167/343 (48%), Gaps = 16/343 (4%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP--DGLTVHSLLCA 308
AR LF+ I P WN +I G ++ +EA+ +S M+ D T S L A
Sbjct: 57 LARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSSTLKA 116
Query: 309 CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC------SVLCNALLVFKELGK 362
C L G VH ++I+ +S+ V N+++ MY C + C V +++
Sbjct: 117 CAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVRKVFD 176
Query: 363 N---ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
N + V+WN++I+ ++ + E R F+ M+ +IKP ++F +V A A S++
Sbjct: 177 NMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATSRSIKK 236
Query: 420 VTQLHCYITKTGLAF--DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
+ + K G + D+FV++ + +Y + G L S+R++F+ ++ W+++I Y
Sbjct: 237 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVY 296
Query: 478 AQFGCGDEALKLFTR-MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Q C E+++LF + S + + VT + +A S + VE G + + + +P
Sbjct: 297 VQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKNFRELP 356
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
S +V + +R G V ++ + M + D+V W +++++
Sbjct: 357 IVIINSLMV-MYSRCGFVQKSFGVFHSMR-ERDVVSWNTMISA 397
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
NIR T A ++ ACS + S+ LG+++H + +V + + +++MY K G+++ A
Sbjct: 520 NIRPNAVTVASILPACSQVGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYA 579
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F + +RN V++T MI G Q+ AI L++ M + G+ P F +++ ACS
Sbjct: 580 ENMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSACSYS 639
Query: 150 GSVCLG-------RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
G V G R+++ SEH + M + R+ +A G+ +
Sbjct: 640 GLVDEGLKIFEDMREVYNIQPSSEHYC------CITDMLGRVGRVNEAYEFVKGLGEEGN 693
Query: 203 TS--WGSMIAAFSKLGYELEALCHFNEML 229
+ WGS++ + +L ELE +E L
Sbjct: 694 IAELWGSLLGS-CRLHGELELAETVSERL 721
>gi|302774719|ref|XP_002970776.1| hypothetical protein SELMODRAFT_94128 [Selaginella moellendorffii]
gi|300161487|gb|EFJ28102.1| hypothetical protein SELMODRAFT_94128 [Selaginella moellendorffii]
Length = 750
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 168/569 (29%), Positives = 272/569 (47%), Gaps = 58/569 (10%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A ++ AC S R L G+++H HI + L N ++ MYGKCGSL DAR FD +
Sbjct: 15 ASIVRACGSSRDLIAGKRIHAHIADANLGNYRFLANLLVEMYGKCGSLHDARRVFDSIHS 74
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQM---------------LQSGV----------M 133
N+ SW ++ +QN + +A + + +M QSG M
Sbjct: 75 PNIFSWNLLVVAYTQNGRLREARQCFEKMPGKNVVCWTGLITANAQSGYVLSARGVFEKM 134
Query: 134 P--GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
P + T+ +++ G V + +H +++ L ++ MY + +AR
Sbjct: 135 PQRNRVTWTAMVWCLVNAGDVIEAKIIHEQLVQMGIAEQLPLAKFIVQMYLSCGSLDEAR 194
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH-GAYQPNEFIFGSVFSACSN 250
N+F + KDV W ++IAA++K G EA+ F M G Y
Sbjct: 195 NLFDLLPSKDVGMWTAVIAAYAKYGRWQEAIKLFETMESRTGPYS--------------- 239
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+ WNA+I+ + ++ LF +MR + + PD LT+ + L C
Sbjct: 240 -------------VLVWNAIISASFQNGQLKGSLELFWKMRRQGVRPDSLTLATALDTCA 286
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
L++G V + G SN V ++++ MY KC L +A VF + V W+
Sbjct: 287 ASGNLHEGRMVAELVTVYGLQSNDLVNSSLVHMYGKCGSLDDARRVFDGMAHRG-PVVWS 345
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
+IAA +H E F L M ++++ D + + AC + +LE ++H +IT
Sbjct: 346 KMIAAYSEHGHCSEAFVLLKEMESAKMVADASSCVAFLQACGSLLALEAGQEVHGWITMK 405
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
GL DVFV N L+D+Y KCGS+ A +F+ M+ + SW+ ++ Y G EA+++F
Sbjct: 406 GLEQDVFVGNALVDMYGKCGSVEEAWAVFDNMKEKNWFSWNFMVEAYCSSGYSTEAIQVF 465
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
+M GV PN T VL AC H G + EG+ M ++Y ++P EH +C V LL R
Sbjct: 466 LQMLQEGVKPNAKTFTSVLVACGHAGFIREGILHLVYMSSDYDVVPIAEHYACAVGLLGR 525
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
+G V EAE+++ ++ DA+ VW +L+ +
Sbjct: 526 SGWVKEAEEYVKKLP-DAEASVWDALVTA 553
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 115/220 (52%), Gaps = 3/220 (1%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP T A + C++ +L GR V + + + Q + ++ + +++MYGKCGSL+DAR
Sbjct: 271 VRPDSLTLATALDTCAASGNLHEGRMVAELVTVYGLQSNDLVNSSLVHMYGKCGSLDDAR 330
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD M R V W+ MIA S++ ++A L +M + ++ + + ++AC L
Sbjct: 331 RVFDGMAHRGPVVWSKMIAAYSEHGHCSEAFVLLKEMESAKMVADASSCVAFLQACGSLL 390
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G+++H + + NAL+ MY K + +A VF + K+ SW M+
Sbjct: 391 ALEAGQEVHGWITMKGLEQDVFVGNALVDMYGKCGSVEEAWAVFDNMKEKNWFSWNFMVE 450
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
A+ GY EA+ F +ML G +PN F SV AC +
Sbjct: 451 AYCSSGYSTEAIQVFLQMLQEGV-KPNAKTFTSVLVACGH 489
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 98/179 (54%), Gaps = 5/179 (2%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S+ + AC SL +L+ G++VH I + + DV + N +++MYGKCGS+E+A FD
Sbjct: 377 SSCVAFLQACGSLLALEAGQEVHGWITMKGLEQDVFVGNALVDMYGKCGSVEEAWAVFDN 436
Query: 96 MPQRNVVSWTAMI-AGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
M ++N SW M+ A CS Y +AI++++QMLQ GV P TF S++ AC G +
Sbjct: 437 MKEKNWFSWNFMVEAYCSSGYS-TEAIQVFLQMLQEGVKPNAKTFTSVLVACGHAGFIRE 495
Query: 155 GRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
G LH + S++ IA++ + + + + +A + + + W +++ A
Sbjct: 496 G-ILHLVYMSSDYDVVPIAEHYACAVGLLGRSGWVKEAEEYVKKLPDAEASVWDALVTA 553
>gi|357475531|ref|XP_003608051.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509106|gb|AES90248.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 763
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 182/584 (31%), Positives = 277/584 (47%), Gaps = 83/584 (14%)
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
P V+ N + + K G L +AR FD+MP R V SW MI+G SQ + +A+ L M
Sbjct: 35 PHVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFM 94
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH------GSHL---------- 171
S V + +F + + AC+ GS+ LG+Q+H+ + KS + GS L
Sbjct: 95 HSSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGI 154
Query: 172 ---------------IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+ + ++A Y + D I DA +F + +DV +W ++I+ ++K
Sbjct: 155 REAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKRE 214
Query: 217 YELE-ALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL----------------FNEI 259
E AL F M PNEF V C+ RIL F+
Sbjct: 215 DGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARL-RILYVGKVVHGLCIKDGFDFDNS 273
Query: 260 DSPDLASW--------------------------NALIAGVASHSNANEAMSLFSEMRDR 293
S LA + ++LI G+ S EA +F +RD+
Sbjct: 274 VSSALAEFYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVKEAGMIFYGLRDK 333
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
L+ + L + G Q + KM ++ N ++T+Y+K L A
Sbjct: 334 TLISNNLMIK-------GYAMSGQFKKSKKLFEKMSL-KHLTSLNTMITVYSKNGELDEA 385
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
+ +F + + V+WNS+++ + + + E +L+ M ++ TF+ + ACA
Sbjct: 386 VKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAY 445
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ S + LH ++ KT +V+V L+D Y KCG L A++ F + +P+V +W++L
Sbjct: 446 LCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTAL 505
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I GYA GCG EA+ F M GV PN T V VL+ACSH GLV+EGL + M+ Y
Sbjct: 506 INGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYR 565
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
I PT EH +CVVDLL R+G V EAE+FI QM AD V+W +LL
Sbjct: 566 ITPTIEHYTCVVDLLGRSGRVKEAEEFIIQMPIKADGVIWGALL 609
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 193/476 (40%), Gaps = 68/476 (14%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + Y EAL F +++ ++ +++ +SAC+ SL LG+++H +
Sbjct: 72 NTMISGYSQWGKYTEALTLVSF-MHSSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLF 130
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S Q + + +L+ Y +C + +A M F+++ N V W+ M+AG Q DA++
Sbjct: 131 KSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAME 190
Query: 123 LYIQM----------LQSG-----------------------VMPGQFTFGSIIKACSGL 149
++ +M L SG V+P +FT +++ C+ L
Sbjct: 191 IFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARL 250
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG-SM 208
+ +G+ +H IK +AL Y D + DA+ V+ + + ++ S+
Sbjct: 251 RILYVGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACSNVADSL 310
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLAS-- 266
I +G EA F + N I G S ++ LF ++ L S
Sbjct: 311 IGGLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLN 370
Query: 267 ------------------------------WNALIAGVASHSNANEAMSLFSEMRDRELL 296
WN++++G + +EA+ L+ MR +
Sbjct: 371 TMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVE 430
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
T L AC + QG +H+++ K + NV V A++ Y+KC L +A
Sbjct: 431 YSRSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRS 490
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
F + + + +W ++I H E F ML + P+ TF V+ AC+
Sbjct: 491 FTSIF-SPNVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACS 545
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 3/211 (1%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S ++EAL Y + + ST++ L AC+ L S Q G+ +H H+
Sbjct: 402 NSMMSGYIHNGEHSEALKLY-VTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQLLHAHLA 460
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ Q +V + +++ Y KCG L DA+ F + NV +WTA+I G + + ++AI
Sbjct: 461 KTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEAIS 520
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG-RQLHAHVIKSEHGSHLIAQNALIAMY 181
+ ML GV+P TF +++ ACS G V G + H+ I + ++ +
Sbjct: 521 RFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCVVDLL 580
Query: 182 TKFDRILDARN-VFSGIARKDVTSWGSMIAA 211
+ R+ +A + + D WG+++ A
Sbjct: 581 GRSGRVKEAEEFIIQMPIKADGVIWGALLNA 611
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
K G L AR +F+ M V SW+++I GY+Q+G EAL L + M S V N V+
Sbjct: 49 KTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHSSCVKFNEVSFSA 108
Query: 508 VLTACSHVGLVEEGLHLYRIM----ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
L+AC+ G + G ++ ++ +G + S ++ + + EAE +
Sbjct: 109 CLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVG-----SALLHYYVQCCGIREAEMVFEE 163
Query: 564 MACDADIVVWKSLLA 578
+ D + V+W +LA
Sbjct: 164 LR-DENHVLWSLMLA 177
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 166/591 (28%), Positives = 297/591 (50%), Gaps = 45/591 (7%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ I T+ ++ AC +L +LG ++H + V + N ++ MYGKCG L AR
Sbjct: 141 VAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGAR 200
Query: 91 MGFDK--MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
+ FD M + + VSW ++I+ + +A+ L+ +M + GV +TF + ++
Sbjct: 201 VLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVED 260
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
V LG +H +KS H + + NALIAMY K R+ DA VF+ + +D SW ++
Sbjct: 261 PSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTL 320
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF----------GSVFSACSNFARILFNE 258
++ + +AL +F +M + A +P++ G++ + A + N
Sbjct: 321 LSGLVQNELYRDALNYFRDM-QNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNG 379
Query: 259 IDS------------------------------PDLASWNALIAGVASHSNANEAMSLFS 288
+DS DL SW +IAG A + EA++LF
Sbjct: 380 LDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFR 439
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+++ + + D + + S+L AC G + ++H Y+ K +++ + NAI+ +Y +
Sbjct: 440 KVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVG 498
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
A F+ + ++ D VSW S+I C+ + E LF + + I+PD I +
Sbjct: 499 HRDYARRAFESI-RSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISAL 557
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
A A ++SL+ ++H ++ + G + + + L+D+Y CG++ ++RK+F+ ++ D++
Sbjct: 558 SATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLI 617
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
W+S+I GCG+EA+ LF +M V P+ +T + +L ACSH GL+ EG + IM
Sbjct: 618 LWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIM 677
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ Y + P EH +C+VDLL+R+ + EA F+ M VW +LL +
Sbjct: 678 KYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGA 728
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 163/578 (28%), Positives = 284/578 (49%), Gaps = 47/578 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+ C ++++L G+++H +L K L +L+MY KCGSL+DA FD+M +R
Sbjct: 52 LLDLCVAVKALPQGQQLHARLL--KSHLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERT 109
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+ +W AM+ + + +AI+LY +M GV TF S++KAC LG LG ++H
Sbjct: 110 IFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI--ARKDVTSWGSMIAAFSKLGYE 218
+K G + NALIAMY K + AR +F GI ++D SW S+I+A G
Sbjct: 170 VAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKC 229
Query: 219 LEALCHFNEM------------------------------LHHGAYQPNEF-------IF 241
LEAL F M +H A + N F
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANAL 289
Query: 242 GSVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
++++ C A +F + D SWN L++G+ + +A++ F +M++ PD
Sbjct: 290 IAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQ 349
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
++V +L+ A L G +VH+Y I+ G DSN+ + N ++ MYAKC + + F E
Sbjct: 350 VSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAF-E 408
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
D +SW +IIA Q+ E LF ++ + D + V+ AC+ + S
Sbjct: 409 CMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNF 468
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
+ ++H Y+ K LA D+ + N ++++Y + G AR+ F + + D+VSW+S+I
Sbjct: 469 IREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVH 527
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTRE 539
G EAL+LF ++ + P+ + ++ L+A +++ +++G ++ + + G
Sbjct: 528 NGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRK-GFFLEGP 586
Query: 540 HCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
S +VD+ A G V + + + D+++W S++
Sbjct: 587 IASSLVDMYACCGTVENSRKMFHSVK-QRDLILWTSMI 623
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 160/327 (48%), Gaps = 7/327 (2%)
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+F+E+ + +WNA++ S EA+ L+ EMR + D T S+L AC
Sbjct: 101 VFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGE 160
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE-LGKNADSVSWNSII 373
G ++H +K GF V VCNA++ MY KC L A ++F + + D+VSWNSII
Sbjct: 161 SRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSII 220
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
+A + + E LF RM + + TF + + +++ +H K+
Sbjct: 221 SAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHF 280
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
DV+V N L+ +Y KCG + A ++F M D VSW++L+ G Q +AL F M
Sbjct: 281 ADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDM 340
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARA 551
++ P+ V+++ ++ A G + G +H Y I G+ + + ++D+ A+
Sbjct: 341 QNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRN---GLDSNMQIGNTLIDMYAKC 397
Query: 552 GCVHEAEDFINQMACDADIVVWKSLLA 578
CV + + + D++ W +++A
Sbjct: 398 CCVKHM-GYAFECMHEKDLISWTTIIA 423
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 136/281 (48%), Gaps = 12/281 (4%)
Query: 303 HSLLCA-CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
HSLL C+ L QG Q+H+ ++K + + +L MY KC L +A+ VF E+
Sbjct: 49 HSLLLDLCVAVKALPQGQQLHARLLKSHLSAFLAT--KLLHMYEKCGSLKDAVKVFDEMT 106
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
+ +WN+++ A + + E L+ M + D TF V+ AC + +
Sbjct: 107 ERT-IFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGA 165
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN--FMENPDVVSWSSLILGYAQ 479
++H K G VFV N L+ +Y KCG LG AR LF+ ME D VSW+S+I +
Sbjct: 166 EIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVT 225
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE--EGLHLYRIMENEYGIIPT 537
G EAL LF RM+ +GV+ N T V L V+ G+H + N + +
Sbjct: 226 EGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYV 285
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++ + A+ G + +AE M C D V W +LL+
Sbjct: 286 ---ANALIAMYAKCGRMEDAERVFASMLCR-DYVSWNTLLS 322
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
EAL + +S TNI+ +SA ++L SL+ G+++H ++ + + + +
Sbjct: 533 EALELF-YSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSL 591
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
++MY CG++E++R F + QR+++ WT+MI + N+AI L+ +M V+P
Sbjct: 592 VDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDH 651
Query: 137 FTFGSIIKACSGLGSVCLGRQL 158
TF +++ ACS G + G++
Sbjct: 652 ITFLALLYACSHSGLMVEGKRF 673
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 242/477 (50%), Gaps = 48/477 (10%)
Query: 104 WTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQF--TFGSIIKACSGLGSVCLGRQLHAH 161
W I + DA+ L+++M S + + +K+C+ LG LG LHA
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75
Query: 162 VIKSEHGSHLIAQNALIAMYTKFD-RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
I+S + NAL+ +Y K LD+ +G+A DV GS A
Sbjct: 76 AIRSGAFADRFTANALLNLYCKVPCSYLDS----TGVAIVDVP--GSSTA---------- 119
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNA 280
F SV R +F+E+ D+ SWN L+ G A
Sbjct: 120 --------------------FESV--------RKVFDEMIERDVVSWNTLVLGCAEEGRH 151
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
+EA+ +M PD T+ ++L + +G++VH + + GFDS+V V +++
Sbjct: 152 HEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSL 211
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+ MYA C+ ++ VF L D + WNS++A C Q+ EE +F RML + ++P
Sbjct: 212 IDMYANCTRTDYSVKVFDNLPVR-DHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPV 270
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
+TF+ ++ C +ASL QLH Y+ G +VF+ + L+D+Y KCG + A +F+
Sbjct: 271 PVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFD 330
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
M +PDVVSW+++I+GYA G EAL LF RM PN +T + VLTACSH GLV++
Sbjct: 331 KMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDK 390
Query: 521 GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
G ++ M N YGI+PT EH + + D L RAG + EA +FI++M VW +LL
Sbjct: 391 GWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLL 447
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 154/322 (47%), Gaps = 25/322 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRP-----STYAGLISACSSLRSLQLGRKV 57
N V ++ ++EAL F + RP ST + + C+ ++ G +V
Sbjct: 139 NTLVLGCAEEGRHHEAL---GFVRKMCREGFRPDSFTLSTVLPIFAECADVKR---GLEV 192
Query: 58 HDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQE 117
H + DV + + +++MY C + + FD +P R+ + W +++AGC+QN
Sbjct: 193 HGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSV 252
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
+A+ ++ +MLQ+GV P TF S+I C L S+ G+QLHA+VI ++ ++L
Sbjct: 253 EEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSL 312
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
I MY K I A +F ++ DV SW +MI ++ G EAL F E + G +PN
Sbjct: 313 IDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLF-ERMELGNAKPN 371
Query: 238 EFIFGSVFSACSNFARI-----LFNEIDS-----PDLASWNALIAGVASHSNANEAMSLF 287
F +V +ACS+ + F + + P L + AL + +EA +
Sbjct: 372 HITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFI 431
Query: 288 SEMRDRELLPDGLTVHSLLCAC 309
S+M ++ P +LL AC
Sbjct: 432 SKM---QIKPTASVWSTLLRAC 450
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 170/430 (39%), Gaps = 68/430 (15%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMY-------------- 80
P++ + +C++L LG +H + S D N +LN+Y
Sbjct: 50 PASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVA 109
Query: 81 -----GKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
G + E R FD+M +R+VVSW ++ GC++ + ++A+ +M + G P
Sbjct: 110 IVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPD 169
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
FT +++ + V G ++H ++ S + ++LI MY R + VF
Sbjct: 170 SFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFD 229
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI- 254
+ +D W S++A ++ G EAL F ML G +P F S+ C N A +
Sbjct: 230 NLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGV-RPVPVTFSSLIPVCGNLASLR 288
Query: 255 ---------------------------------------LFNEIDSPDLASWNALIAGVA 275
+F+++ SPD+ SW A+I G A
Sbjct: 289 FGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYA 348
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNV 334
H A EA+ LF M P+ +T ++L AC + +G + S G +
Sbjct: 349 LHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTL 408
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFR 387
A+ + L A ++ + W++++ AC H A+++
Sbjct: 409 EHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIME 468
Query: 388 LFSRMLASQI 397
L R + S +
Sbjct: 469 LEPRSIGSHV 478
>gi|125570343|gb|EAZ11858.1| hypothetical protein OsJ_01732 [Oryza sativa Japonica Group]
Length = 920
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/568 (28%), Positives = 281/568 (49%), Gaps = 45/568 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T ++ +C+ L++L LG+ VH L + + + ++ +Y K D+R F+++
Sbjct: 148 TITFVMKSCTELKNLYLGKGVHADSLKLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEI 207
Query: 97 PQRNVVSWTAMIAGCSQNYQEN--DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+++V++T+MI G S+ +A ++ MLQ+ + + T S+++ LG++
Sbjct: 208 INKDIVAYTSMITGYSETVDSIAWNAFEIATDMLQNNLEVNRVTLVSLLQIAGNLGALQE 267
Query: 155 GRQLHAHVIKSEHG-SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
G+ LH + I+ G S I + +++ YT+ A V ++ V SW ++++ +
Sbjct: 268 GKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQSAATVLQN-SKGTVASWNALLSGLN 326
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------- 251
+ G A+ + MLH P+ F +V SAC+
Sbjct: 327 RAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAELCYFCFAASIHAYFIRRFIPMDV 386
Query: 252 ------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
++ LF+++ D+ S+NA+I G + ANEA SL + M
Sbjct: 387 VLTTALIEVYTKCTRVMRSKYLFDQLIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAE 446
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ PD TV SLL A + L +G +H + I+ GF S+V V N IL MY+ C + A
Sbjct: 447 GVAPDFATVLSLLAAFADQRDLVRGRWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAA 506
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
+F L K + VSW +++ CL + A+E+ +LF M KPD ++ + A +
Sbjct: 507 RAIFDSLEKK-NLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQAVSD 565
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ L + Q+HC++ ++ L D N L+ Y KCG L + LF ++ ++ +W+++
Sbjct: 566 LGHLNGLKQIHCFVYRSLLEKDKITANSLISAYAKCGKLDLSAGLFFSLKYRNLDTWNAM 625
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I YA G L++F +M + P+ +T VLTACSH GLV++G ++ M + Y
Sbjct: 626 ISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVLTACSHAGLVKDGWRIFNSMTSVYS 685
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFI 561
++P EH C+VDLL RAG + + FI
Sbjct: 686 VLPQEEHYGCMVDLLGRAGHLEDGYKFI 713
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 215/478 (44%), Gaps = 73/478 (15%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A L C+ +R L +K+H ++ DV+L + IL+ Y G+L ++R+ F K+
Sbjct: 52 ALLFQGCADVRFL---KKIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKIVN 108
Query: 99 RNVVSW-TAMIAGCSQNYQENDAIKLY--IQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
++ W +AM+ Y E + I LY +++ Q G TF ++K+C+ L ++ LG
Sbjct: 109 DDISLWNSAMVDYFRAGYPE-EVIILYKRLKLNQIGFNGKTITF--VMKSCTELKNLYLG 165
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ +HA +K + ++LI +Y+KF + D+R VF I KD+ ++ SMI +S
Sbjct: 166 KGVHADSLKLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYS-- 223
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVA 275
++ D +WNA
Sbjct: 224 --------------------------------------------ETVDSIAWNAF----- 234
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD-SNV 334
+ ++M L + +T+ SLL L +G +H Y I+ S+
Sbjct: 235 ---------EIATDMLQNNLEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDD 285
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML- 393
+ +I+ Y +C +A V + SWN++++ + Q+ + ML
Sbjct: 286 ILETSIVNFYTRCGAYQSAATVLQ--NSKGTVASWNALLSGLNRAGQSFNAIQYLPVMLH 343
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
++ PD +TF +V+ ACA++ +H Y + + DV + L+++Y KC +
Sbjct: 344 EHKVTPDSVTFANVLSACAELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVM 403
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
++ LF+ + DVVS++++I GY Q +EA L M + GV+P+ T++ +L A
Sbjct: 404 RSKYLFDQLIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPDFATVLSLLAA 461
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 209/442 (47%), Gaps = 51/442 (11%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDH-ILLSKCQPDVVLQ 73
+N +A D QNN + + T L+ +L +LQ G+ +H + I + D +L+
Sbjct: 231 WNAFEIATDMLQNN--LEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILE 288
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSGV 132
I+N Y +CG+ + A + V SW A+++G ++ Q +AI+ ML + V
Sbjct: 289 TSIVNFYTRCGAYQSAATVLQN-SKGTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKV 347
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
P TF +++ AC+ L C +HA+ I+ ++ ALI +YTK R++ ++
Sbjct: 348 TPDSVTFANVLSACAELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKY 407
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN--------------- 237
+F + KDV S+ +MI + + EA N M+ G P+
Sbjct: 408 LFDQLIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGV-APDFATVLSLLAAFADQR 466
Query: 238 -----EFIFG------------------SVFSACSNF--ARILFNEIDSPDLASWNALIA 272
+I G ++SAC AR +F+ ++ +L SW A++
Sbjct: 467 DLVRGRWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAARAIFDSLEKKNLVSWTAMMK 526
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM-QVHSYIIKMGFD 331
G S+ +A+E + LF M+ PD +++ + + A + L G+ Q+H ++ + +
Sbjct: 527 GCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQA-VSDLGHLNGLKQIHCFVYRSLLE 585
Query: 332 SNVPVCNAILTMYAKCSVL-CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+ N++++ YAKC L +A L F +N D +WN++I+A H + +F
Sbjct: 586 KDKITANSLISAYAKCGKLDLSAGLFFSLKYRNLD--TWNAMISAYAMHGFHINVLEMFK 643
Query: 391 RMLASQIKPDHITFNDVMGACA 412
+M I+PD +TF+ V+ AC+
Sbjct: 644 QMEEENIQPDELTFSTVLTACS 665
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 116/215 (53%), Gaps = 1/215 (0%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T L++A + R L GR +H + DV ++N IL MY CG + AR FD
Sbjct: 453 ATVLSLLAAFADQRDLVRGRWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAARAIFDS 512
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ ++N+VSWTAM+ GC N ++ ++L+ M + G P + + ++A S LG +
Sbjct: 513 LEKKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQAVSDLGHLNGL 572
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+Q+H V +S I N+LI+ Y K ++ + +F + +++ +W +MI+A++
Sbjct: 573 KQIHCFVYRSLLEKDKITANSLISAYAKCGKLDLSAGLFFSLKYRNLDTWNAMISAYAMH 632
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
G+ + L F +M QP+E F +V +ACS+
Sbjct: 633 GFHINVLEMFKQMEEENI-QPDELTFSTVLTACSH 666
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 133/268 (49%), Gaps = 6/268 (2%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
+R++F +I + D++ WN+ + E + L+ ++ ++ +G T+ ++ +C
Sbjct: 99 SRLVFQKIVNDDISLWNSAMVDYFRAGYPEEVIILYKRLKLNQIGFNGKTITFVMKSCTE 158
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
LY G VH+ +K+ N V ++++ +Y+K S ++ VF+E+ N D V++ S
Sbjct: 159 LKNLYLGKGVHADSLKLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEI-INKDIVAYTS 217
Query: 372 IIAACLQ--HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
+I + + A F + + ML + ++ + +T ++ + +L+ LHCY +
Sbjct: 218 MITGYSETVDSIAWNAFEIATDMLQNNLEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIR 277
Query: 430 TGLAF-DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
+ D + +++ Y +CG+ SA + + V SW++L+ G + G A++
Sbjct: 278 RAIGVSDDILETSIVNFYTRCGAYQSAATVLQNSKGT-VASWNALLSGLNRAGQSFNAIQ 336
Query: 489 LFTRM-RSLGVSPNLVTLVGVLTACSHV 515
M V+P+ VT VL+AC+ +
Sbjct: 337 YLPVMLHEHKVTPDSVTFANVLSACAEL 364
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 124/263 (47%), Gaps = 9/263 (3%)
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
++H+ + G +V + + IL+ YA L + LVF+++ N D WNS + +
Sbjct: 66 KIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKI-VNDDISLWNSAMVDYFRA 124
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
EE+ L+ R+ +QI + T VM +C ++ +L + +H K L+ + FV
Sbjct: 125 GYPEEVIILYKRLKLNQIGFNGKTITFVMKSCTELKNLYLGKGVHADSLKLALSGNKFVG 184
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF--GCGDEALKLFTRMRSLG 497
+ L+ +Y K +R +F + N D+V+++S+I GY++ A ++ T M
Sbjct: 185 SSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWNAFEIATDMLQNN 244
Query: 498 VSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
+ N VTLV +L ++G ++EG LH Y I G+ S +V+ R G
Sbjct: 245 LEVNRVTLVSLLQIAGNLGALQEGKSLHCYSI-RRAIGVSDDILETS-IVNFYTRCGAYQ 302
Query: 556 EAEDFINQMACDADIVVWKSLLA 578
A + + W +LL+
Sbjct: 303 SAATVLQN--SKGTVASWNALLS 323
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 54/101 (53%)
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
A + + ++H + GL +DV + + ++ Y G+L +R +F + N D+ W+S +
Sbjct: 59 ADVRFLKKIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKIVNDDISLWNSAM 118
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
+ Y + G +E + L+ R++ + N T+ V+ +C+ +
Sbjct: 119 VDYFRAGYPEEVIILYKRLKLNQIGFNGKTITFVMKSCTEL 159
>gi|296090396|emb|CBI40215.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 163/545 (29%), Positives = 284/545 (52%), Gaps = 24/545 (4%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
I L ++ R+V + ++ Q DVV N ++N Y + G +++AR+ FD +N+
Sbjct: 46 IQELGRLGRVEEARRVFNEMI----QRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNI 101
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
+WT ++ G ++ + +A +++ M + V+ ++ ++I G + R+L
Sbjct: 102 RTWTILLTGYAKEGRIEEAREVFESMTERNVV----SWNAMISGYVQNGDLKNARKLFDE 157
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
+ + ++ + N+++ Y R+ +AR +F + ++ SW MI+ + + EA
Sbjct: 158 MPEK----NVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEA 213
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEI-DSPDLASWNALIAGVA 275
F +M NE+ + ++ +A + R+ L+ + + + ASW A+IAG
Sbjct: 214 WDVFVKMCR----TRNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTNSASWAAMIAGFV 269
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
+ + EA+ L E+ +P + S L AC + G +HS IK G N
Sbjct: 270 QNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSY 329
Query: 336 VCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V N +++MYAKC + + VF+ + D VSW +II+A +Q E LF MLA
Sbjct: 330 VMNGLISMYAKCGNVEDGSHVFRTIRMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLA 389
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
IKP+ +T ++ AC + ++++ Q H I K G +FV N L+ +Y KCG
Sbjct: 390 RGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YED 448
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
+F M D+++W+++++G AQ G G EA+K+F +M G+ P+ ++ +GVL ACSH
Sbjct: 449 GFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSH 508
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
GLV+EG + M +YGI+P H +C+VDLL RAG + EAE I M D V+W+
Sbjct: 509 AGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWE 568
Query: 575 SLLAS 579
+LL +
Sbjct: 569 ALLGA 573
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 185/399 (46%), Gaps = 40/399 (10%)
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK-------- 214
I+ +HL N I + R+ +AR VF+ + ++DV SW SMI +S+
Sbjct: 31 IQETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEAR 90
Query: 215 ------------------LGYELEALCH-----FNEMLHHGAYQPNEFIFGSVFSACSNF 251
GY E F M N I G V +
Sbjct: 91 LLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKN 150
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR LF+E+ ++ASWN+++ G +EA LF +M +R + S + G
Sbjct: 151 ARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSV-------SWMVMISG 203
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+ + + +KM N ++ +A+C L +A+ +++ + + +S SW +
Sbjct: 204 YVHISDYWEAWDVFVKMCRTRNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTNSASWAA 263
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+IA +Q+ ++ E L + S P +F + ACA + +E+ +H KTG
Sbjct: 264 MIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTG 323
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP--DVVSWSSLILGYAQFGCGDEALKL 489
F+ +VMNGL+ +Y KCG++ +F + P DVVSW+++I Y Q G G+ AL L
Sbjct: 324 CQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRMPKRDVVSWTAIISAYVQAGHGEVALDL 383
Query: 490 FTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
F M + G+ PN +T+ +L+AC ++G ++ G + ++
Sbjct: 384 FLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALI 422
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 167/350 (47%), Gaps = 44/350 (12%)
Query: 80 YGKCGSLEDARMGFDKMP-QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
+ +CG L+DA ++++P Q N SW AMIAG QN + +A++L I++ +SG +P +
Sbjct: 236 FAQCGRLDDAIQLYERVPEQTNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSS 295
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI- 197
F S + AC+ +G V +GR +H+ IK+ + N LI+MY K + D +VF I
Sbjct: 296 FTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIR 355
Query: 198 -ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-- 254
++DV SW ++I+A+ + G+ AL F +ML G +PN+ S+ SAC N I
Sbjct: 356 MPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGI-KPNQLTVTSLLSACGNLGAIKL 414
Query: 255 -------------------------------------LFNEIDSPDLASWNALIAGVASH 277
+F E+ DL +WNA++ G A +
Sbjct: 415 GEQFHALIFKLGFDTFLFVGNSLITMYFKCGYEDGFCVFEEMPEHDLITWNAVLVGCAQN 474
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM-QVHSYIIKMGFDSNVPV 336
EA+ +F +M +LPD ++ +LCAC + +G +S K G V
Sbjct: 475 GLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYH 534
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
++ + + L A + + + DSV W +++ AC H E L+
Sbjct: 535 YTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNNELLY 584
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 145/286 (50%), Gaps = 17/286 (5%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD- 94
S++ +SAC+++ +++GR +H + + CQ + + N +++MY KCG++ED F
Sbjct: 294 SSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRT 353
Query: 95 -KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
+MP+R+VVSWTA+I+ Q A+ L++ ML G+ P Q T S++ AC LG++
Sbjct: 354 IRMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIK 413
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
LG Q HA + K + L N+LI MY K D VF + D+ +W +++ +
Sbjct: 414 LGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCA 472
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS-----PD 263
+ G EA+ F +M G P++ F V ACS+ + FN + P
Sbjct: 473 QNGLGKEAIKIFEQMEVEGIL-PDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPL 531
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+ + ++ + +EA +L M + PD + +LL AC
Sbjct: 532 VYHYTCMVDLLGRAGYLSEAEALIENM---PVKPDSVIWEALLGAC 574
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 170/569 (29%), Positives = 289/569 (50%), Gaps = 44/569 (7%)
Query: 50 SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIA 109
+LQ + +H +++SK +V + ++N+Y G++ AR FD + R+V +W MI+
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 110 GCSQNYQENDAIKLY-IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG 168
G + ++ I+ + + ML SG+ P TF S++KAC +V G ++H +K
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFM 182
Query: 169 SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
+ +LI +Y+++ + +AR +F + +D+ SW +MI+ + + G EAL N +
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 229 -------------------------------LHHGAYQPNEFIFGSVFSACSNFARI--- 254
+ HG + F+ + + F R+
Sbjct: 243 RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG-LESELFVSNKLIDLYAEFGRLRDC 301
Query: 255 --LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
+F+ + DL SWN++I + A+SLF EMR + PD LT+ SL
Sbjct: 302 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 313 LTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+ V + ++ G F ++ + NA++ MYAK ++ +A VF L N D +SWN+
Sbjct: 362 GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL-PNTDVISWNT 420
Query: 372 IIAACLQHNQAEELFRLFSRMLAS-QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
II+ Q+ A E +++ M +I + T+ V+ AC++ +L +LH + K
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 480
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
GL DVFV+ L D+Y KCG L A LF + + V W++LI + G G++A+ LF
Sbjct: 481 GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLF 540
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
M GV P+ +T V +L+ACSH GLV+EG + +M+ +YGI P+ +H C+VD+ R
Sbjct: 541 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGR 600
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
AG + A FI M+ D +W +LL++
Sbjct: 601 AGQLETALKFIKSMSLQPDASIWGALLSA 629
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 134/478 (28%), Positives = 228/478 (47%), Gaps = 51/478 (10%)
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
++ + C+ L S + LHA ++ S+ ++ L+ +Y + AR+ F I +
Sbjct: 59 TLFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------- 251
DV +W MI+ + + G E + F+ + P+ F SV AC
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCL 175
Query: 252 ----------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEA 283
ARILF+E+ D+ SWNA+I+G NA EA
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
++L + +R D +TV SLL AC +G+ +HSY IK G +S + V N ++ +
Sbjct: 236 LTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
YA+ L + VF + D +SWNSII A + Q LF M S+I+PD +T
Sbjct: 292 YAEFGRLRDCQKVFDRMYVR-DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLT 350
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAF-DVFVMNGLMDIYIKCGSLGSARKLFNFM 462
+ +++ + + + + G D+ + N ++ +Y K G + SAR +FN++
Sbjct: 351 LISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 410
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNLVTLVGVLTACSHVGLVEEG 521
N DV+SW+++I GYAQ G EA++++ M G ++ N T V VL ACS G + +G
Sbjct: 411 PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 470
Query: 522 LHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ L+ R+++N G+ + + D+ + G + +A Q+ + V W +L+A
Sbjct: 471 MKLHGRLLKN--GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIA 525
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 190/446 (42%), Gaps = 51/446 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS-TYAGLISACSSLRSLQLGRKVHDHI 61
N +S C+ EAL + +R S T L+SAC+ G +H +
Sbjct: 220 NAMISGYCQSGNAKEALTL------SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYS 273
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ + ++ + N ++++Y + G L D + FD+M R+++SW ++I N Q AI
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI-KSEHGSHLIAQNALIAM 180
L+ +M S + P T S+ S LG + R + + K + NA++ M
Sbjct: 334 SLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K + AR VF+ + DV SW ++I+ +++ G+ EA+ +N M G N+
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 453
Query: 241 FGSVFSACSNFARI----------------------------------------LFNEID 260
+ SV ACS + LF +I
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ WN LIA H + +A+ LF EM D + PD +T +LL AC + +G
Sbjct: 514 RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573
Query: 321 VHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+ G ++ ++ MY + L AL K + D+ W ++++AC H
Sbjct: 574 CFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVH 633
Query: 380 NQAEELFRLFSRMLASQIKPDHITFN 405
+L ++ S L +++P+H+ ++
Sbjct: 634 GNV-DLGKIASEHLF-EVEPEHVGYH 657
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/505 (31%), Positives = 263/505 (52%), Gaps = 53/505 (10%)
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
ML+ V P +TF +KACS L GR +H H I + + L AL+ MY K
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM------------------ 228
+ DA ++F+ + +D+ +W +M+A ++ G A+ H M
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 229 --------LHHG----AY------QPNE---------FIFGS----VFSACSN--FARIL 255
L G AY PN + G+ +++ C + +AR +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL-LPDGLTVHSLLCACIGRLT 314
F+ + + + +W+ALI G S +A LF M + L ++ S L AC
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
L G Q+H+ + K G +++ N++L+MYAK ++ A+ +F E+ D+VS++++++
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVS 299
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
+Q+ +AEE F +F +M A ++PD T ++ AC+ +A+L+ H + GLA
Sbjct: 300 GYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLAS 359
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
+ + N L+D+Y KCG + +R++FN M + D+VSW+++I GY G G EA LF M
Sbjct: 360 ETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMN 419
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCV 554
+LG P+ VT + +L+ACSH GLV EG H + +M + YG+ P EH C+VDLL+R G +
Sbjct: 420 NLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFL 479
Query: 555 HEAEDFINQMACDADIVVWKSLLAS 579
EA +FI M AD+ VW +LL +
Sbjct: 480 DEAYEFIQSMPLRADVRVWVALLGA 504
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 141/539 (26%), Positives = 227/539 (42%), Gaps = 61/539 (11%)
Query: 32 RIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
R+ P+ T+ + ACS+L GR +H H + + Q D+ + +L+MY KC L DA
Sbjct: 5 RVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDA 64
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQN--YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
F MP R++V+W AM+AG + + Y A L +QM + P T +++ +
Sbjct: 65 AHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLA 124
Query: 148 GLGSVCLGRQLHAHVI----------KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
G++ G +HA+ I KS+ ++ AL+ MY K +L AR VF +
Sbjct: 125 QQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM 184
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------ 251
++ +W ++I F +A F ML G + S AC++
Sbjct: 185 PARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMG 244
Query: 252 ----------------------------------ARILFNEIDSPDLASWNALIAGVASH 277
A LF+E+ D S++AL++G +
Sbjct: 245 EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQN 304
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
A EA +F +M+ + PD T+ SL+ AC L G H +I G S +C
Sbjct: 305 GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC 364
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
NA++ MYAKC + + VF + + D VSWN++IA H +E LF M
Sbjct: 365 NALIDMYAKCGRIDLSRQVFNMM-PSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGF 423
Query: 398 KPDHITFNDVMGACAKMA-SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
PD +TF ++ AC+ +E H GL + ++D+ + G L A
Sbjct: 424 PPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAY 483
Query: 457 KLFNFME-NPDVVSWSSLILG---YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+ M DV W +L+ Y G + ++ + G N V L + +A
Sbjct: 484 EFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTG-NFVLLSNIYSA 541
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VS + EA + + Q N+ +T LI ACS L +LQ GR H +++
Sbjct: 298 VSGYVQNGRAEEAFLVFKKMQA-CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ + N +++MY KCG ++ +R F+ MP R++VSW MIAG + +A L++
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 416
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG-----SHLIAQNALIAM 180
+M G P TF ++ ACS G V G+ HV+ +G H I L++
Sbjct: 417 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWF-HVMGHGYGLTPRMEHYICMVDLLSR 475
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
D + + S R DV W +++ A
Sbjct: 476 GGFLDEAYEF--IQSMPLRADVRVWVALLGA 504
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 179/573 (31%), Positives = 278/573 (48%), Gaps = 99/573 (17%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWT----------------------- 105
D +++ H+ K G + AR FD MP+R+VVS+T
Sbjct: 152 DFMVREHV-----KAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCP 206
Query: 106 --------AMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
AMIAG N DA+ ++ +ML GV P + T S+IKAC G G L
Sbjct: 207 LCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMS 266
Query: 158 LHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+ +KS +L +N+LI +Y + AR +F + +DV SW +++ +++LG
Sbjct: 267 IVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELG 326
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVAS 276
+LE AR + +E+ + SW L+A
Sbjct: 327 -DLEG------------------------------ARRVLDEMPERNEVSWGTLVARHEQ 355
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
NA EA+SL+S+M P+ S+L AC L G ++H+ +KM +NV V
Sbjct: 356 KGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFV 415
Query: 337 CNAILTMYAKCSVLCNALLVF---------------------------KELGKNADS--- 366
+A++ MY KC L +A ++F +EL K +
Sbjct: 416 SSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNV 475
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
SWNSII+ Q+ Q + + F MLAS P ITF+ V+ ACA + SLEM +H
Sbjct: 476 ASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAK 535
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
I K G+ +FV L D+Y K G L S++++F M + V+W+++I G A+ G +E+
Sbjct: 536 IIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEES 595
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
+ LF M S G++PN T + +L ACSH GLVE +H + +M+ GI P +H +C+VD
Sbjct: 596 ILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQ-ACGISPKAKHYTCMVD 654
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+LARAG + EAED + ++ ++ W +LL++
Sbjct: 655 VLARAGHLAEAEDLLLKIESKSEANSWAALLSA 687
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 131/250 (52%), Gaps = 34/250 (13%)
Query: 34 RP--STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP S ++ ++ AC+SL+ L+ GRK+H+ L C +V + + +++MY KC L DA+M
Sbjct: 375 RPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQM 434
Query: 92 GF-------------------------------DKMPQRNVVSWTAMIAGCSQNYQENDA 120
F KMP RNV SW ++I+G +QN Q DA
Sbjct: 435 IFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDA 494
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+K + ML SG PG+ TF S++ AC+ L S+ +G+ +HA +IK + AL M
Sbjct: 495 LKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDM 554
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K + ++ VF + +++ +W +MI ++ G+ E++ F +M+ G PNE
Sbjct: 555 YAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAG-ITPNEQT 613
Query: 241 FGSVFSACSN 250
F ++ ACS+
Sbjct: 614 FLAILFACSH 623
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 175/418 (41%), Gaps = 74/418 (17%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
DVV +L++Y + G LE AR D+MP+RN VSW ++A Q +A+ LY QML
Sbjct: 311 DVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQML 370
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
G P F S++ AC+ L + GR++H +K +++ +ALI MY K ++
Sbjct: 371 ADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLP 430
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSK--------------------------LGYE---- 218
DA+ +F + +K++ W S+I+ +S GY
Sbjct: 431 DAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQ 490
Query: 219 -LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------- 251
++AL F+ ML G P E F SV AC++
Sbjct: 491 FIDALKSFHAMLASG-QSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGT 549
Query: 252 --------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
++ +F E+ + +W A+I G+A + A E++ LF +M + P
Sbjct: 550 ALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITP 609
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+ T ++L AC + M + G ++ + A+ L A +
Sbjct: 610 NEQTFLAILFACSHSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDLL 669
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM--LASQIKPDHITFNDVMGACAK 413
++ +++ SW ++++AC + E R R+ L ++ +++ +C K
Sbjct: 670 LKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGK 727
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 73/116 (62%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T++ ++ AC+SL SL++G+ VH I+ + + + + +MY K G L+ ++ F +M
Sbjct: 512 TFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEM 571
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
P+RN V+WTAMI G ++N ++I L+ M+ +G+ P + TF +I+ ACS G V
Sbjct: 572 PKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLV 627
>gi|62733531|gb|AAX95648.1| Tetratricopeptide repeat, putative [Oryza sativa Japonica Group]
Length = 888
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 179/573 (31%), Positives = 278/573 (48%), Gaps = 99/573 (17%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWT----------------------- 105
D +++ H+ K G + AR FD MP+R+VVS+T
Sbjct: 152 DFMVREHV-----KAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCP 206
Query: 106 --------AMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
AMIAG N DA+ ++ +ML GV P + T S+IKAC G G L
Sbjct: 207 LCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMS 266
Query: 158 LHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+ +KS +L +N+LI +Y + AR +F + +DV SW +++ +++LG
Sbjct: 267 IVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELG 326
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVAS 276
+LE AR + +E+ + SW L+A
Sbjct: 327 -DLEG------------------------------ARRVLDEMPERNEVSWGTLVARHEQ 355
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
NA EA+SL+S+M P+ S+L AC L G ++H+ +KM +NV V
Sbjct: 356 KGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFV 415
Query: 337 CNAILTMYAKCSVLCNALLVF---------------------------KELGKNADS--- 366
+A++ MY KC L +A ++F +EL K +
Sbjct: 416 SSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNV 475
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
SWNSII+ Q+ Q + + F MLAS P ITF+ V+ ACA + SLEM +H
Sbjct: 476 ASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAK 535
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
I K G+ +FV L D+Y K G L S++++F M + V+W+++I G A+ G +E+
Sbjct: 536 IIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEES 595
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
+ LF M S G++PN T + +L ACSH GLVE +H + +M+ GI P +H +C+VD
Sbjct: 596 ILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQ-ACGISPKAKHYTCMVD 654
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+LARAG + EAED + ++ ++ W +LL++
Sbjct: 655 VLARAGHLAEAEDLLLKIESKSEANSWAALLSA 687
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 131/250 (52%), Gaps = 34/250 (13%)
Query: 34 RP--STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP S ++ ++ AC+SL+ L+ GRK+H+ L C +V + + +++MY KC L DA+M
Sbjct: 375 RPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQM 434
Query: 92 GF-------------------------------DKMPQRNVVSWTAMIAGCSQNYQENDA 120
F KMP RNV SW ++I+G +QN Q DA
Sbjct: 435 IFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDA 494
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+K + ML SG PG+ TF S++ AC+ L S+ +G+ +HA +IK + AL M
Sbjct: 495 LKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDM 554
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K + ++ VF + +++ +W +MI ++ G+ E++ F +M+ G PNE
Sbjct: 555 YAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAG-ITPNEQT 613
Query: 241 FGSVFSACSN 250
F ++ ACS+
Sbjct: 614 FLAILFACSH 623
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 175/418 (41%), Gaps = 74/418 (17%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
DVV +L++Y + G LE AR D+MP+RN VSW ++A Q +A+ LY QML
Sbjct: 311 DVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQML 370
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
G P F S++ AC+ L + GR++H +K +++ +ALI MY K ++
Sbjct: 371 ADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLP 430
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSK--------------------------LGYE---- 218
DA+ +F + +K++ W S+I+ +S GY
Sbjct: 431 DAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQ 490
Query: 219 -LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------- 251
++AL F+ ML G P E F SV AC++
Sbjct: 491 FIDALKSFHAMLASGQ-SPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGT 549
Query: 252 --------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
++ +F E+ + +W A+I G+A + A E++ LF +M + P
Sbjct: 550 ALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITP 609
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+ T ++L AC + M + G ++ + A+ L A +
Sbjct: 610 NEQTFLAILFACSHSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDLL 669
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM--LASQIKPDHITFNDVMGACAK 413
++ +++ SW ++++AC + E R R+ L ++ +++ +C K
Sbjct: 670 LKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGK 727
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 73/116 (62%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T++ ++ AC+SL SL++G+ VH I+ + + + + +MY K G L+ ++ F +M
Sbjct: 512 TFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEM 571
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
P+RN V+WTAMI G ++N ++I L+ M+ +G+ P + TF +I+ ACS G V
Sbjct: 572 PKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLV 627
>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
Length = 705
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 175/589 (29%), Positives = 292/589 (49%), Gaps = 49/589 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++A L+ S Q R++H +L+ VL ++ Y K G + A FD M
Sbjct: 55 SHASLLLRLQSCPDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGM 114
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGSVCLG 155
P+RN +W A+I G + ++A++++ M+ G V FT+ +IKAC+ LG+V G
Sbjct: 115 PRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQG 174
Query: 156 RQL----HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
R++ + ++ Q AL+ M+ K + +ARNVF + +D+ +W +MI
Sbjct: 175 RKVWEMVETDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGG 234
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------------- 249
G LE + FN M G + + I +V SAC
Sbjct: 235 TVHSGNWLEVVDLFNHMRSEG-FGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASG 293
Query: 250 ------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
A LF +S D+ SW++LI G + + N ++SLF EM
Sbjct: 294 DIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMI 353
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ P+ T+ S+L C+ L L + G ++H + I+ G + + V +A++ +Y+K ++
Sbjct: 354 SLGINPNSSTLASIL-PCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLI 412
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
A +F L + D WNS++A + ++ F + +KPDH+T V+
Sbjct: 413 RVAETIF-WLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPL 471
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
C + L +LH Y+ K + V N L+D+Y KCG L A+++F M + V++
Sbjct: 472 CNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTY 531
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
+ LI + + D+AL F M+ G++P+ VT V +L+ CSH GL+++GLHLY M +
Sbjct: 532 NILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLH 591
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+Y I P +EH SC+VDL +R G + EA F++ MA + +I V LLA+
Sbjct: 592 DYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAA 640
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 137/511 (26%), Positives = 229/511 (44%), Gaps = 48/511 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHD--- 59
N + L ++EAL + N+ ++ + TY +I AC++L ++ GRKV +
Sbjct: 123 NAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVE 182
Query: 60 -HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
I +P+V +Q +++M+ KCG L++AR F+ M R++ +WTAMI G +
Sbjct: 183 TDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWL 242
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
+ + L+ M G ++I AC G + +G LH +KS + NAL+
Sbjct: 243 EVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALV 302
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
MY K + A +F KDV SW S+I +S+ G ++ F EM+ G PN
Sbjct: 303 DMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLG-INPNS 361
Query: 239 FIFGSVFSACS----------------------------------------NFARILFNE 258
S+ S A +F
Sbjct: 362 STLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWL 421
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
DLA WN+++AG A + ++ A ++ L PD +TV S+L C L QG
Sbjct: 422 TLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQG 481
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
++H+Y+IK +S V NA+L MY KC L A VF +L ++V++N +I++ +
Sbjct: 482 KELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVF-QLMTERNTVTYNILISSFGK 540
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL-HCYITKTGLAFDVF 437
HN ++ F M I PD +TF ++ C+ ++ L H + ++ +
Sbjct: 541 HNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKE 600
Query: 438 VMNGLMDIYIKCGSLGSARKLF-NFMENPDV 467
+ ++D+Y +CG L A N E P++
Sbjct: 601 HYSCIVDLYSRCGKLDEAWCFMSNMAEEPEI 631
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 181/422 (42%), Gaps = 54/422 (12%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A +ISAC LQ+G +H + S D+ + N +++MY KCG +E A F
Sbjct: 264 ATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNS 323
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
++VVSW+++I G SQN N ++ L+ +M+ G+ P T SI+ S L + G+++
Sbjct: 324 KDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEI 383
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H I+ +ALI +Y+K I A +F KD+ W SM+A ++ GY
Sbjct: 384 HCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYS 443
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------------------------- 250
A C +L +P+ SV C+
Sbjct: 444 DSAFCAL-RLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNA 502
Query: 251 ------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
A+ +F + + ++N LI+ H++ ++A+S F M+ + PD
Sbjct: 503 LLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPD 562
Query: 299 GLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+T +LL C + +G+ + HS + + I+ +Y++C L A
Sbjct: 563 KVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFM 622
Query: 358 KELGKNADSVSWNSIIAACLQHNQAE--ELF--RLFSR--------MLASQIKPDHITFN 405
+ + + ++AAC HN+ + EL R+F + +L S I D ++
Sbjct: 623 SNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILLSNIYADAGMWS 682
Query: 406 DV 407
DV
Sbjct: 683 DV 684
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 142/313 (45%), Gaps = 18/313 (5%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I ST A ++ S L+ ++ G+++H + + + + ++++Y K G + A
Sbjct: 357 INPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAE 416
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F +++ W +M+AG + N + A + + G+ P T S++ C+
Sbjct: 417 TIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHH 476
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ G++LHA+VIK S NAL+ MY K + A+ VF + ++ ++ +I+
Sbjct: 477 MLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILIS 536
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARILFNEID 260
+F K +E +AL F+ M G P++ F ++ S CS+ + +L +
Sbjct: 537 SFGKHNHEDQALSFFDLMKRDG-IAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNI 595
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
SP+ ++ ++ + +EA S M + P+ + LL AC ++ M
Sbjct: 596 SPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEE---PEIDVLGGLLAAC----RVHNRMD 648
Query: 321 VHSYIIKMGFDSN 333
+ + K F+ N
Sbjct: 649 IAELVGKRIFEQN 661
>gi|218193589|gb|EEC76016.1| hypothetical protein OsI_13171 [Oryza sativa Indica Group]
Length = 950
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 179/573 (31%), Positives = 278/573 (48%), Gaps = 99/573 (17%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWT----------------------- 105
D +++ H+ K G + AR FD MP+R+VVS+T
Sbjct: 152 DFMVREHV-----KAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCP 206
Query: 106 --------AMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
AMIAG N DA+ ++ +ML GV P + T S+IKAC G G L
Sbjct: 207 LCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMS 266
Query: 158 LHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+ +KS +L +N+LI +Y + AR +F + +DV SW +++ +++LG
Sbjct: 267 IVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELG 326
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVAS 276
+LE AR + +E+ + SW L+A
Sbjct: 327 -DLEG------------------------------ARRVLDEMPERNEVSWGTLVARHEQ 355
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
NA EA+SL+S+M P+ S+L AC L G ++H+ +KM +NV V
Sbjct: 356 KGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFV 415
Query: 337 CNAILTMYAKCSVLCNALLVF---------------------------KELGKNADS--- 366
+A++ MY KC L +A ++F +EL K +
Sbjct: 416 SSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNV 475
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
SWNSII+ Q+ Q + + F MLAS P ITF+ V+ ACA + SLEM +H
Sbjct: 476 ASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAK 535
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
I K G+ +FV L D+Y K G L S++++F M + V+W+++I G A+ G +E+
Sbjct: 536 IIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEES 595
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
+ LF M S G++PN T + +L ACSH GLVE +H + +M+ GI P +H +C+VD
Sbjct: 596 ILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQ-ACGISPKAKHYTCMVD 654
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+LARAG + EAED + ++ ++ W +LL++
Sbjct: 655 VLARAGHLAEAEDLLLKIESKSEANSWAALLSA 687
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 131/250 (52%), Gaps = 34/250 (13%)
Query: 34 RP--STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP S ++ ++ AC+SL+ L+ GRK+H+ L C +V + + +++MY KC L DA+M
Sbjct: 375 RPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQM 434
Query: 92 GF-------------------------------DKMPQRNVVSWTAMIAGCSQNYQENDA 120
F KMP RNV SW ++I+G +QN Q DA
Sbjct: 435 IFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDA 494
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+K + ML SG PG+ TF S++ AC+ L S+ +G+ +HA +IK + AL M
Sbjct: 495 LKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDM 554
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K + ++ VF + +++ +W +MI ++ G+ E++ F +M+ G PNE
Sbjct: 555 YAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAG-ITPNEQT 613
Query: 241 FGSVFSACSN 250
F ++ ACS+
Sbjct: 614 FLAILFACSH 623
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 176/418 (42%), Gaps = 74/418 (17%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
DVV +L++Y + G LE AR D+MP+RN VSW ++A Q +A+ LY QML
Sbjct: 311 DVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQML 370
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
G P F S++ AC+ L + GR++H +K +++ +ALI MY K ++
Sbjct: 371 ADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLP 430
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSK--------------------------LGYE---- 218
DA+ +F + +K++ W S+I+ +S GY
Sbjct: 431 DAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQ 490
Query: 219 -LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------ARIL------------ 255
++AL F+ ML G P E F SV AC++ A+I+
Sbjct: 491 FIDALKSFHAMLASGQ-SPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGT 549
Query: 256 ------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
F E+ + +W A+I G+A + A E++ LF +M + P
Sbjct: 550 ALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITP 609
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+ T ++L AC + M + G ++ + A+ L A +
Sbjct: 610 NEQTFLAILFACSHSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDLL 669
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM--LASQIKPDHITFNDVMGACAK 413
++ +++ SW ++++AC + E R R+ L ++ +++ +C K
Sbjct: 670 LKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGK 727
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 73/116 (62%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T++ ++ AC+SL SL++G+ VH I+ + + + + +MY K G L+ ++ F +M
Sbjct: 512 TFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEM 571
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
P+RN V+WTAMI G ++N ++I L+ M+ +G+ P + TF +I+ ACS G V
Sbjct: 572 PKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLV 627
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 164/574 (28%), Positives = 277/574 (48%), Gaps = 57/574 (9%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+SS + NEAL + +++ +Y G+IS +L RK+ D +
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSV-----SYNGMISGYLRNGEFELARKLFDEM---- 121
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ D+V N ++ Y + +L AR F+ MP+R+V SW M++G +QN +DA ++
Sbjct: 122 PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFD 181
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + + + ++ S + C+ + KS L++ N L+ + K
Sbjct: 182 RMPEKNDVSWNALLSAYVQN-SKMEEACM-------LFKSRENWALVSWNCLLGGFVKKK 233
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+I++AR F + +DV SW ++I +++ G EA F+E + + G +
Sbjct: 234 KIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQ 293
Query: 246 SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
+ AR LF+++ + SWNA++AG A LF M R
Sbjct: 294 NRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR------------ 341
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
NV N ++T YA+C + A +F ++ K D
Sbjct: 342 ---------------------------NVSTWNTMITGYAQCGKISEAKNLFDKMPKR-D 373
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
VSW ++IA Q + E RLF +M + + +F+ + CA + +LE+ QLH
Sbjct: 374 PVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG 433
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
+ K G FV N L+ +Y KCGS+ A LF M D+VSW+++I GY++ G G+
Sbjct: 434 RLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEV 493
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
AL+ F M+ G+ P+ T+V VL+ACSH GLV++G + M +YG++P +H +C+V
Sbjct: 494 ALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMV 553
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
DLL RAG + +A + + M + D +W +LL +
Sbjct: 554 DLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA 587
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 186/438 (42%), Gaps = 77/438 (17%)
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEID 260
D+ W I+++ + G EAL F M + N I G + + AR LF+E+
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDREL------------------------- 295
DL SWN +I G + N +A LF M +R++
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 296 LPD--GLTVHSLLCACIGRLTLYQ---------------------GMQVHSYII--KMGF 330
+P+ ++ ++LL A + + + G I+ + F
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFF 242
Query: 331 DS----NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
DS +V N I+T YA+ + A +F E D +W ++++ +Q+ EE
Sbjct: 243 DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE-SPVQDVFTWTAMVSGYIQNRMVEEAR 301
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
LF +M + + +++N ++ + +EM +L + +V N ++ Y
Sbjct: 302 ELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVMP----CRNVSTWNTMITGY 353
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
+CG + A+ LF+ M D VSW+++I GY+Q G EAL+LF +M G N +
Sbjct: 354 AQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFS 413
Query: 507 GVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVD-----LLARAGCVHEAEDF 560
L+ C+ V +E G L+ R+++ Y C V + + G + EA D
Sbjct: 414 SALSTCADVVALELGKQLHGRLVKGGY-------ETGCFVGNALLLMYCKCGSIEEANDL 466
Query: 561 INQMACDADIVVWKSLLA 578
+MA DIV W +++A
Sbjct: 467 FKEMA-GKDIVSWNTMIA 483
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 150/361 (41%), Gaps = 60/361 (16%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
DVV N I+ Y + G +++AR FD+ P ++V +WTAM++G QN +A +L+ +M
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP 308
Query: 129 QS-----GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ M + G ++ L V R + N +I Y +
Sbjct: 309 ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS-------------TWNTMITGYAQ 355
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
+I +A+N+F + ++D SW +MIA +S+ G+ EAL F +M G + N F S
Sbjct: 356 CGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSFSS 414
Query: 244 VFSACSNF----------------------------------------ARILFNEIDSPD 263
S C++ A LF E+ D
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 474
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VH 322
+ SWN +IAG + H A+ F M+ L PD T+ ++L AC + +G Q +
Sbjct: 475 IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFY 534
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ G N ++ + + +L +A + K + D+ W +++ A H
Sbjct: 535 TMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNT 594
Query: 383 E 383
E
Sbjct: 595 E 595
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 20/182 (10%)
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAF-----DVFVMNGLMDIYIKCGSLGSARKLF 459
N+ GA A SL+ TQ ++T D+ N + Y++ G A ++F
Sbjct: 29 NNAHGA-ANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVF 87
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
M VS++ +I GY + G + A KLF M + V + G + ++G
Sbjct: 88 KRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRN-RNLGKAR 146
Query: 520 EGLHLYRIMENEYGIIPTREHCS--CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
E L+ IM P R+ CS ++ A+ GCV +A ++M D V W +LL
Sbjct: 147 E---LFEIM-------PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKND-VSWNALL 195
Query: 578 AS 579
++
Sbjct: 196 SA 197
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 161/505 (31%), Positives = 263/505 (52%), Gaps = 53/505 (10%)
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
ML+ V P +TF +KACS L GR +H H I + + L AL+ MY K
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM------------------ 228
+ DA ++F+ + +D+ +W +M+A ++ G A+ H M
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 229 --------LHHG----AY------QPNE---------FIFGS----VFSACSN--FARIL 255
L G AY PN + G+ +++ C + +AR +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL-LPDGLTVHSLLCACIGRLT 314
F+ + + + +W+ALI G S +A LF M + L ++ S L AC
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
L G Q+H+ + K G +++ N++L+MYAK ++ A+ +F E+ D+VS++++++
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVS 299
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
+Q+ +AEE F +F +M A ++PD T ++ AC+ +A+L+ H + GLA
Sbjct: 300 GYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLAS 359
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
+ + N L+D+Y KCG + +R++FN M + D+VSW+++I GY G G EA LF M
Sbjct: 360 ETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMN 419
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCV 554
+LG P+ VT + +L+ACSH GLV EG H + +M + YG+ P EH C+VDLL+R G +
Sbjct: 420 NLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFL 479
Query: 555 HEAEDFINQMACDADIVVWKSLLAS 579
EA +FI M AD+ VW +LL +
Sbjct: 480 DEAYEFIQSMPLRADVRVWVALLGA 504
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 141/539 (26%), Positives = 227/539 (42%), Gaps = 61/539 (11%)
Query: 32 RIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
R+ P+ T+ + ACS+L GR +H H + + Q D+ + +L+MY KC L DA
Sbjct: 5 RVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDA 64
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQN--YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
F MP R++V+W AM+AG + + Y A L +QM + P T +++ +
Sbjct: 65 AHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLA 124
Query: 148 GLGSVCLGRQLHAHVI----------KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
G++ G +HA+ I KS+ ++ AL+ MY K +L AR VF +
Sbjct: 125 QQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM 184
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------ 251
++ +W ++I F +A F ML G + S AC++
Sbjct: 185 PARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMG 244
Query: 252 ----------------------------------ARILFNEIDSPDLASWNALIAGVASH 277
A LF+E+ D S++AL++G +
Sbjct: 245 EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQN 304
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
A EA +F +M+ + PD T+ SL+ AC L G H +I G S +C
Sbjct: 305 GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC 364
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
NA++ MYAKC + + VF + + D VSWN++IA H +E LF M
Sbjct: 365 NALIDMYAKCGRIDLSRQVFNMM-PSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGF 423
Query: 398 KPDHITFNDVMGACAKMA-SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
PD +TF ++ AC+ +E H GL + ++D+ + G L A
Sbjct: 424 PPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAY 483
Query: 457 KLFNFME-NPDVVSWSSLILG---YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+ M DV W +L+ Y G + ++ + G N V L + +A
Sbjct: 484 EFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTG-NFVLLSNIYSA 541
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VS + EA + + Q N+ +T LI ACS L +LQ GR H +++
Sbjct: 298 VSGYVQNGRAEEAFLVFKKMQA-CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ + N +++MY KCG ++ +R F+ MP R++VSW MIAG + +A L++
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 416
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG-----SHLIAQNALIAM 180
+M G P TF ++ ACS G V G+ HV+ +G H I L++
Sbjct: 417 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWF-HVMGHGYGLTPRMEHYICMVDLLSR 475
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
D + + S R DV W +++ A
Sbjct: 476 GGFLDEAYEF--IQSMPLRADVRVWVALLGA 504
>gi|226499544|ref|NP_001141715.1| uncharacterized protein LOC100273844 [Zea mays]
gi|194705652|gb|ACF86910.1| unknown [Zea mays]
Length = 375
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 162/238 (68%), Gaps = 2/238 (0%)
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
MY +C +A+ VF E + D V+WNSI+ AC+QH E++F+LF + +S D I
Sbjct: 1 MYTRCLDFPSAMDVFHETN-DRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRI 59
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
+ N+V+ A A++ EM Q+H Y K GL D + N L+D Y KCGSL A KLF M
Sbjct: 60 SLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIM 119
Query: 463 -ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
DV SWSSLI+GYAQFG EAL LF RMR+LGV PN VT VGVL ACS VGLV+EG
Sbjct: 120 GTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEG 179
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ Y IME EYGI+PT+EHCSCV+DLLARAG + EA F++QM + DI++W +LLA+
Sbjct: 180 CYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAA 237
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 120/239 (50%), Gaps = 12/239 (5%)
Query: 244 VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
+++ C +F A +F+E + D+ +WN+++ H + + LF + D ++
Sbjct: 1 MYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRIS 60
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
++++L A QVH+Y K+G S+ + NA++ YAKC L +A +F+ +G
Sbjct: 61 LNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMG 120
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
D SW+S+I Q A+E LF+RM +KP+H+TF V+ AC+++ +
Sbjct: 121 TGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVG----LV 176
Query: 422 QLHCYI-----TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
CY + G+ + ++D+ + G L A K + M PD++ W++L+
Sbjct: 177 DEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLL 235
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 8/175 (4%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG--Q 136
MY +C A F + R+VV+W +++ C Q+ D KL+ ++L S MP +
Sbjct: 1 MYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLF-RLLHSS-MPSLDR 58
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS- 195
+ +++ A + LG + +Q+HA+ K S I NALI Y K + DA +F
Sbjct: 59 ISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEI 118
Query: 196 -GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
G R DV SW S+I +++ GY EAL F M + G +PN F V ACS
Sbjct: 119 MGTGR-DVFSWSSLIVGYAQFGYAKEALDLFARMRNLGV-KPNHVTFVGVLIACS 171
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 92/175 (52%), Gaps = 5/175 (2%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ-R 99
++SA + L ++ ++VH + D +L N +++ Y KCGSL+DA F+ M R
Sbjct: 64 VLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGR 123
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
+V SW+++I G +Q +A+ L+ +M GV P TF ++ ACS +G V G +
Sbjct: 124 DVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYY 183
Query: 160 AHVIKSEHGSHLIAQ--NALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAA 211
+ +++ E+G + + +I + + R+ +A + D+ W +++AA
Sbjct: 184 S-IMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAA 237
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 12/219 (5%)
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGY-ELEALCH---FNEMLHHGAYQPNEFIFGSVFS 246
R + S + D S ++++A ++LGY E+ H F L A N I ++
Sbjct: 47 RLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALI--DTYA 104
Query: 247 ACSNF--ARILFNEIDS-PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
C + A LF + + D+ SW++LI G A A EA+ LF+ MR+ + P+ +T
Sbjct: 105 KCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFV 164
Query: 304 SLLCACIGRLTLYQGMQVHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
+L AC + +G +S + + G C+ ++ + A+ L A ++
Sbjct: 165 GVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPF 224
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
D + WN+++AA HN E R +L I P H
Sbjct: 225 EPDIIMWNTLLAASRTHNDVEMGKRAAEGVL--NIDPSH 261
>gi|222625627|gb|EEE59759.1| hypothetical protein OsJ_12247 [Oryza sativa Japonica Group]
Length = 950
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 179/573 (31%), Positives = 278/573 (48%), Gaps = 99/573 (17%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWT----------------------- 105
D +++ H+ K G + AR FD MP+R+VVS+T
Sbjct: 152 DFMVREHV-----KAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCP 206
Query: 106 --------AMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
AMIAG N DA+ ++ +ML GV P + T S+IKAC G G L
Sbjct: 207 LCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMS 266
Query: 158 LHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+ +KS +L +N+LI +Y + AR +F + +DV SW +++ +++LG
Sbjct: 267 IVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELG 326
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVAS 276
+LE AR + +E+ + SW L+A
Sbjct: 327 -DLEG------------------------------ARRVLDEMPERNEVSWGTLVARHEQ 355
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
NA EA+SL+S+M P+ S+L AC L G ++H+ +KM +NV V
Sbjct: 356 KGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFV 415
Query: 337 CNAILTMYAKCSVLCNALLVF---------------------------KELGKNADS--- 366
+A++ MY KC L +A ++F +EL K +
Sbjct: 416 SSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNV 475
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
SWNSII+ Q+ Q + + F MLAS P ITF+ V+ ACA + SLEM +H
Sbjct: 476 ASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAK 535
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
I K G+ +FV L D+Y K G L S++++F M + V+W+++I G A+ G +E+
Sbjct: 536 IIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEES 595
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
+ LF M S G++PN T + +L ACSH GLVE +H + +M+ GI P +H +C+VD
Sbjct: 596 ILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQ-ACGISPKAKHYTCMVD 654
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+LARAG + EAED + ++ ++ W +LL++
Sbjct: 655 VLARAGHLAEAEDLLLKIESKSEANSWAALLSA 687
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 131/250 (52%), Gaps = 34/250 (13%)
Query: 34 RP--STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP S ++ ++ AC+SL+ L+ GRK+H+ L C +V + + +++MY KC L DA+M
Sbjct: 375 RPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQM 434
Query: 92 GF-------------------------------DKMPQRNVVSWTAMIAGCSQNYQENDA 120
F KMP RNV SW ++I+G +QN Q DA
Sbjct: 435 IFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDA 494
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+K + ML SG PG+ TF S++ AC+ L S+ +G+ +HA +IK + AL M
Sbjct: 495 LKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDM 554
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K + ++ VF + +++ +W +MI ++ G+ E++ F +M+ G PNE
Sbjct: 555 YAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAG-ITPNEQT 613
Query: 241 FGSVFSACSN 250
F ++ ACS+
Sbjct: 614 FLAILFACSH 623
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 176/418 (42%), Gaps = 74/418 (17%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
DVV +L++Y + G LE AR D+MP+RN VSW ++A Q +A+ LY QML
Sbjct: 311 DVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQML 370
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
G P F S++ AC+ L + GR++H +K +++ +ALI MY K ++
Sbjct: 371 ADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLP 430
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSK--------------------------LGYE---- 218
DA+ +F + +K++ W S+I+ +S GY
Sbjct: 431 DAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQ 490
Query: 219 -LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------ARIL------------ 255
++AL F+ ML G P E F SV AC++ A+I+
Sbjct: 491 FIDALKSFHAMLASGQ-SPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGT 549
Query: 256 ------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
F E+ + +W A+I G+A + A E++ LF +M + P
Sbjct: 550 ALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITP 609
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+ T ++L AC + M + G ++ + A+ L A +
Sbjct: 610 NEQTFLAILFACSHSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDLL 669
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM--LASQIKPDHITFNDVMGACAK 413
++ +++ SW ++++AC + E R R+ L ++ +++ +C K
Sbjct: 670 LKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGK 727
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 73/116 (62%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T++ ++ AC+SL SL++G+ VH I+ + + + + +MY K G L+ ++ F +M
Sbjct: 512 TFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEM 571
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
P+RN V+WTAMI G ++N ++I L+ M+ +G+ P + TF +I+ ACS G V
Sbjct: 572 PKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLV 627
>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
Length = 789
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 171/561 (30%), Positives = 282/561 (50%), Gaps = 54/561 (9%)
Query: 50 SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIA 109
SL+ GRK+H ++ S + L NH+L+MY + S DA + D+MP+RN +SW A+I
Sbjct: 27 SLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNALSWNAVIR 86
Query: 110 GCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGS 169
+Q ++ + +MLQ G +P F S+IKA ++ G + KS
Sbjct: 87 ANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPR---TIQEGEIVQEFAEKSGFDR 143
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
+ ALI MY + R+ A++ F I + V SW ++I +S+ + ++L F EML
Sbjct: 144 SFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREML 203
Query: 230 HHGAYQPNEFIF-----------------GSVFSACS----------------------- 249
G PN G++ +CS
Sbjct: 204 LQG-IAPNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLISVTTVANSIINLFGRGG 262
Query: 250 NFARI--LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC 307
N R +F ++D D+ SWN +I+ A + +++ A+ L+ M R PDG+T ++L
Sbjct: 263 NITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRMTIR---PDGVTFVNVLE 319
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
AC L +G +H + G+DS++ V A+++MY +C L A VF + ++ +
Sbjct: 320 ACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAI-QHPGVI 378
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ-LHCY 426
+ N+IIAA Q +A+ F +ML I+P T V+GACA + + LH +
Sbjct: 379 TLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRW 438
Query: 427 ITKTG---LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
+ + D+ V N L+++Y KCG L +AR +F+ +V +W++++ GYAQ G
Sbjct: 439 MAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYA 498
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
+ A++L M+ G+SP+ ++ L+A SH VE+G ++ + +YG+IP+ EH
Sbjct: 499 NMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGA 558
Query: 544 VVDLLARAGCVHEAEDFINQM 564
VVDLL RAG + EAE F+ M
Sbjct: 559 VVDLLGRAGWLEEAEGFLRSM 579
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 169/377 (44%), Gaps = 51/377 (13%)
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
+ N I+N++G+ G++ A F+KM +R+V SW MI+ +QN + A+ LY +M
Sbjct: 248 TTVANSIINLFGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRMT- 306
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD 189
+ P TF ++++AC + G +H V + S LI AL++MY + R+
Sbjct: 307 --IRPDGVTFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDR 364
Query: 190 ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV----- 244
A VF+ I V + ++IAA ++ G +L HF +ML G +P++F +V
Sbjct: 365 AAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLG-IRPSKFTLVAVLGACA 423
Query: 245 -------------------------------------FSACSNF--ARILFNEIDSPDLA 265
++ C + AR +F+ +++
Sbjct: 424 TSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVS 483
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
+WNA++AG A H AN A+ L EM+ + PD ++ + L A + G ++ I
Sbjct: 484 TWNAIMAGYAQHGYANMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAI 543
Query: 326 IK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
+ G +V A++ + + L A + + AD+ +W +++ AC H +
Sbjct: 544 SRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDR 603
Query: 385 LFRLFSRMLASQIKPDH 401
R ++A I P H
Sbjct: 604 AMRAAEAIVA--IDPSH 618
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 134/267 (50%), Gaps = 6/267 (2%)
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
+L QG ++H +I+ G+ ++ + N +L MYA+ +A L+ + + +++SWN++I
Sbjct: 27 SLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRR-NALSWNAVI 85
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
A Q F RML PD + F ++ A + E+V + + K+G
Sbjct: 86 RANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRTIQEGEIVQE---FAEKSGFD 142
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
V L+ +Y +CG L A+ F+ ++ VVSW++LI Y++ +++L++F M
Sbjct: 143 RSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREM 202
Query: 494 RSLGVSPNLVTLVGVLTACSHVGL-VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAG 552
G++PN VT++ + +A + + + +L + G+I + +++L R G
Sbjct: 203 LLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLISVTTVANSIINLFGRGG 262
Query: 553 CVHEAEDFINQMACDADIVVWKSLLAS 579
+ A D +M D+ W +++++
Sbjct: 263 NITRANDIFEKMD-RRDVCSWNTMISA 288
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 129/268 (48%), Gaps = 16/268 (5%)
Query: 2 SNDYVSSLCKQNLYNEALVAYDFSQNN---------TNIRIRPS--TYAGLISACSSLRS 50
+ND + ++++ + + F+QN + IRP T+ ++ AC
Sbjct: 267 ANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRMTIRPDGVTFVNVLEACDCPDD 326
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
L+ G +H + D+++ +++MY +CG L+ A F + V++ A+IA
Sbjct: 327 LERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAA 386
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII-KACSGLGSVCLGRQLHAHVIK--SEH 167
+Q + + ++ + QMLQ G+ P +FT +++ + + GR LH + + +
Sbjct: 387 HAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDC 446
Query: 168 GSH-LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
H ++ +NAL+ MY K + AR +F + +V++W +++A +++ GY A+
Sbjct: 447 DPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYANMAVRLLY 506
Query: 227 EMLHHGAYQPNEFIFGSVFSACSNFARI 254
EM G P+ F + SA S+ ++
Sbjct: 507 EMQLAG-ISPDPISFTAALSASSHARQV 533
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 81/175 (46%), Gaps = 5/175 (2%)
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
++ D+ + SLE ++H + ++G +F+ N L+ +Y + S A L + M
Sbjct: 14 SWRDLARLVDESTSLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRM 73
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
+ +SW+++I AQ G +L F RM G P+ V + ++ A ++EG
Sbjct: 74 PRRNALSWNAVIRANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPR---TIQEGE 130
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ E G + + ++ + R G + A+D +++ + +V W +L+
Sbjct: 131 IVQEFAEKS-GFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQ-ERGVVSWNALI 183
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 163/515 (31%), Positives = 250/515 (48%), Gaps = 45/515 (8%)
Query: 107 MIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE 166
MI G + A+ Y ML+ G P +FTF ++K C+ LG + GR H VIK
Sbjct: 78 MIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLG 137
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
+ N+L+A Y K + DA VF G+ +D+ +W M+ + G AL F
Sbjct: 138 LEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQ 197
Query: 227 EM------------------------------------LHHGAYQPNEFIFGS----VFS 246
EM + HG Q + G+ ++
Sbjct: 198 EMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQ--DIKVGTSLLDMYC 255
Query: 247 ACSN--FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
C +AR +F + + +WN +I G A + +EA F +MR L + +T +
Sbjct: 256 KCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAIN 315
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
LL AC + G VH Y+++ F +V + A+L MY K + ++ +F ++ N
Sbjct: 316 LLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIA-NK 374
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
VSWN++IAA + E LF +L + PD+ T + V+ A + SL Q+H
Sbjct: 375 TLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIH 434
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
YI G A + +MN ++ +Y + G + ++R++F+ M + DV+SW+++I+GYA G G
Sbjct: 435 SYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGK 494
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV 544
AL++F M+ G+ PN T V VLTACS GLV+EG + +M EYG+IP EH C+
Sbjct: 495 TALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCM 554
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
DLL R G + E FI M D VW SLL +
Sbjct: 555 TDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTA 589
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 219/495 (44%), Gaps = 65/495 (13%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP T+ ++ C+ L L GR H ++ + DV N ++ Y K G +EDA
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD MP R++V+W M+ G N + A+ + +M + + Q II A L +
Sbjct: 164 VFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDA--LEVQHDSVGIIAA---LAA 218
Query: 152 VCL------GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
CL G+++H +VI+ + +L+ MY K + AR+VF+ + + V +W
Sbjct: 219 CCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTW 278
Query: 206 GSMIAAFS----------------KLGYELEALCHFNEMLH-------------HGAYQP 236
MI ++ G ++E + N + HG
Sbjct: 279 NCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVR 338
Query: 237 NEFI------------FGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
+F+ +G V S + +F +I + L SWN +IA EA+
Sbjct: 339 RQFLPHVVLETALLEMYGKVGKVES--SEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAI 396
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
+LF E+ ++ L PD T+ +++ A + +L Q+HSYII +G+ N + NA+L MY
Sbjct: 397 TLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMY 456
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
A+ + + +F ++ + D +SWN++I H Q + +F M + ++P+ TF
Sbjct: 457 ARSGDVVASREIFDKM-VSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTF 515
Query: 405 NDVMGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
V+ AC+ + E + + + G+ + + D+ G G R++ F+E
Sbjct: 516 VSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDL---LGREGDLREVLQFIE 572
Query: 464 ----NPDVVSWSSLI 474
+P W SL+
Sbjct: 573 SMPIDPTSRVWGSLL 587
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 176/398 (44%), Gaps = 50/398 (12%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A L + C S+Q G+++H +++ + D+ + +L+MY KCG + AR F MP
Sbjct: 214 AALAACCLEFSSMQ-GKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPL 272
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
R VV+W MI G + N + ++A ++QM G+ T +++ AC+ S GR +
Sbjct: 273 RTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSV 332
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H +V++ + H++ + AL+ MY K ++ + +F IA K + SW +MIAA+
Sbjct: 333 HGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMY 392
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSA---------CSNF------------------ 251
EA+ F E+L+ Y P+ F +V A C
Sbjct: 393 TEAITLFLELLNQPLY-PDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNA 451
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
+R +F+++ S D+ SWN +I G A H A+ +F EM+ L P+
Sbjct: 452 VLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPN 511
Query: 299 GLTVHSLLCAC-IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
T S+L AC + L M + + + G + + + + L L
Sbjct: 512 ESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFI 571
Query: 358 KELGKNADSVSWNSIIAACLQHNQ-------AEELFRL 388
+ + + S W S++ A N AE +F+L
Sbjct: 572 ESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQL 609
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 122/219 (55%), Gaps = 1/219 (0%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+++ T L++AC+ S GR VH +++ + P VVL+ +L MYGK G +E +
Sbjct: 306 LQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSE 365
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F K+ + +VSW MIA +AI L++++L + P FT +++ A LG
Sbjct: 366 KIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLG 425
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
S+ RQ+H+++I + + + NA++ MY + ++ +R +F + KDV SW +MI
Sbjct: 426 SLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIM 485
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
++ G AL F+EM ++G QPNE F SV +ACS
Sbjct: 486 GYAIHGQGKTALEMFDEMKYNG-LQPNESTFVSVLTACS 523
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 153/325 (47%), Gaps = 10/325 (3%)
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT-LYQ 317
+ PD N +I G A A++ + M + PD T ++ C RL L +
Sbjct: 67 VRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTF-PVVVKCCARLGGLDE 125
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G H +IK+G + +V CN+++ YAK ++ +A VF + D V+WN ++ +
Sbjct: 126 GRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVR-DIVTWNIMVDGYV 184
Query: 378 QHNQAEELFRLFSRML-ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
+ F M A +++ D + + AC S ++H Y+ + GL D+
Sbjct: 185 SNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDI 244
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
V L+D+Y KCG + AR +F M VV+W+ +I GYA DEA F +MR+
Sbjct: 245 KVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAE 304
Query: 497 GVSPNLVTLVGVLTACSHV--GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCV 554
G+ +VT + +L AC+ L +H Y + +P + ++++ + G V
Sbjct: 305 GLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQ---FLPHVVLETALLEMYGKVGKV 361
Query: 555 HEAEDFINQMACDADIVVWKSLLAS 579
+E ++A + +V W +++A+
Sbjct: 362 ESSEKIFGKIA-NKTLVSWNNMIAA 385
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 109/214 (50%), Gaps = 9/214 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N+ +++ + +Y EA+ + N + T + ++ A L SL+ R++H +I+
Sbjct: 380 NNMIAAYMYKEMYTEAITLF-LELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYII 438
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ ++ N +L+MY + G + +R FDKM ++V+SW MI G + + Q A++
Sbjct: 439 GLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALE 498
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ +M +G+ P + TF S++ ACS G V G +H +++ E+G +I Q T
Sbjct: 499 MFDEMKYNGLQPNESTFVSVLTACSVSGLVDEG-WMHFNLMLQEYG--MIPQIEHYGCMT 555
Query: 183 K-FDRILDARNVFSGIARK--DVTS--WGSMIAA 211
R D R V I D TS WGS++ A
Sbjct: 556 DLLGREGDLREVLQFIESMPIDPTSRVWGSLLTA 589
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 175/585 (29%), Positives = 287/585 (49%), Gaps = 50/585 (8%)
Query: 44 ACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS--LEDARMGFDKMPQ--R 99
A SS R+ + G +H L S + N ++ Y L A + F +P R
Sbjct: 23 AASSDRTPRTGEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALR 82
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQS--GVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+V SW +++ S+++ + A+ + M+ S V+P +F + A + + S G
Sbjct: 83 DVASWNSLLNPLSRHHPVS-ALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAGAV 141
Query: 158 LHAHVIK--SEHGSH-LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
HA K S GS+ + AL+ MY K + DA+ VF G+ ++ SW +M++ ++
Sbjct: 142 THALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYAT 201
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA--------------------------- 247
EA F ML + NEF+ +V SA
Sbjct: 202 GKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVS 261
Query: 248 -------------CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
C + A +F + +W+A+I G A + AN A +F +M
Sbjct: 262 VENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSG 321
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
P T +L AC L G Q H ++K+GF++ V V +A++ MYAKC + +A
Sbjct: 322 FTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAK 381
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
F +L D V W ++I +Q+ + EE L+SRM I P ++T V+ ACA +
Sbjct: 382 DGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACL 441
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
A+L++ QLH I K + V L +Y KCG+L + +F M + DV+SW+S+I
Sbjct: 442 AALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSII 501
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
++Q G G +AL +F M+ G +P+ +T + +L+ACSH+GLV+ G +R M +Y +
Sbjct: 502 SVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMTKDYNL 561
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
IPT +H +C+VD+L+RAG + EA+DFI+ + D +W+ +L +
Sbjct: 562 IPTLDHYACMVDILSRAGQLKEAKDFIDSITIDHGTCLWRIVLGA 606
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 128/219 (58%), Gaps = 2/219 (0%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ G+++ACS + +L +G++ H ++ + V +++ +++MY KCG + DA+ GF ++
Sbjct: 328 TFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQL 387
Query: 97 PQ-RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+VV WTAMI G QN + +A+ LY +M + G++P T S+++AC+ L ++ LG
Sbjct: 388 YDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLG 447
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+QLHA ++K AL MY+K + D+ VF + +DV SW S+I+ FS+
Sbjct: 448 KQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQH 507
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
G +AL F EM G P+ F ++ SACS+ +
Sbjct: 508 GRGSDALDMFEEMKLEGT-APDHITFINLLSACSHMGLV 545
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 146/311 (46%), Gaps = 42/311 (13%)
Query: 40 GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR 99
++SA S L +G ++H +L V ++N ++ MY K ++ A F +R
Sbjct: 230 AVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKER 289
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
N ++W+AMI G +QN + N A ++++QM SG P +FTF ++ ACS +G++ +G+Q H
Sbjct: 290 NSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTH 349
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR-KDVTSWGSMIAAFSKLGYE 218
++K + + ++AL+ MY K I DA++ F + DV W +MI + G
Sbjct: 350 CLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEH 409
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR------------------------- 253
EAL ++ M G P+ SV AC+ A
Sbjct: 410 EEALMLYSRMDKQGII-PSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTA 468
Query: 254 ---------------ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
++F + D+ SWN++I+ + H ++A+ +F EM+ PD
Sbjct: 469 LSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPD 528
Query: 299 GLTVHSLLCAC 309
+T +LL AC
Sbjct: 529 HITFINLLSAC 539
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
Query: 15 YNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
+ EAL+ Y I PS T ++ AC+ L +L LG+++H IL + +
Sbjct: 409 HEEALMLYSRMDKQGII---PSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSV 465
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
+ MY KCG+LED+ + F +MP R+V+SW ++I+ SQ+ + +DA+ ++ +M G
Sbjct: 466 GTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGT 525
Query: 133 MPGQFTFGSIIKACSGLGSVCLG 155
P TF +++ ACS +G V G
Sbjct: 526 APDHITFINLLSACSHMGLVDRG 548
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 129/267 (48%), Gaps = 15/267 (5%)
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS----VLCNALLVF 357
+ L CA T G +H + +K G S+ PV N+++T Y CS +L A +VF
Sbjct: 17 IEHLRCAASSDRTPRTGEALHGWALKSGAASHAPVSNSLITFY--CSLPRPLLGAAYVVF 74
Query: 358 KELGKN-ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI---KPDHITFNDVMGACAK 413
++ D SWNS++ +H+ L S M + + P A
Sbjct: 75 ADIPAALRDVASWNSLLNPLSRHHPVSALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVP 134
Query: 414 MASLEMVTQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
AS VT L C + + + +VFV L+++Y K G++ A+++F+ M + + VSW++
Sbjct: 135 SASAGAVTHALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAA 194
Query: 473 LILGYAQFGCGDEALKLFTRM-RSLGVSPNLVTLVGVLTACS-HVGLVEEGLHLYRIMEN 530
++ GYA C +EA +LF M + + N VL+A S +GL+ G L+ ++
Sbjct: 195 MVSGYATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLL-MGTQLHGLVLK 253
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEA 557
+ G++ + +V + A+A C+ A
Sbjct: 254 D-GLVGFVSVENSLVTMYAKAECMDAA 279
>gi|357494773|ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519010|gb|AET00634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 173/623 (27%), Positives = 300/623 (48%), Gaps = 54/623 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ +L ++LY + L Y ++ + P+ + + A S + + ++ H L
Sbjct: 78 NSFLKTLFSRSLYPQFLSFYSLMRSEN---VLPNHFTFPMVASSYAHFMMIRSGMNLHAL 134
Query: 63 LSKC---QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
K + + + +++Y +C + DA FD++P R+VV+WTA++ G QN +
Sbjct: 135 ACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEM 194
Query: 120 AIKLYIQMLQSG---VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA 176
++ +M + G P T AC LG + GR LH V+K+ G L Q++
Sbjct: 195 GLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSS 254
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH------ 230
+++MY K +A FS + KD+ SW SMI +++ G + + F EML
Sbjct: 255 VLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPD 314
Query: 231 -----------------------HGA-----YQPNEFIFGSVFSACSNFARILFNE---- 258
HG Y P+E + S+ S F + F E
Sbjct: 315 GMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQ 374
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC--IGRLTLY 316
+ WN +I G + + LF EM+ + + + + S + +C +G + L
Sbjct: 375 RSQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINL- 433
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
G +H +IK D + V N+++ MY KC + + +F D + WN++I+A
Sbjct: 434 -GRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNR--SERDVILWNALISAH 490
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
+ EE LF M+ P+ T V+ AC+ +A LE +LH YI + G ++
Sbjct: 491 IHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNL 550
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
+ L+D+Y KCG L +R++F+ M DV+ W+++I GY G + A+++F M
Sbjct: 551 PLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEES 610
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
V PN +T + +L+AC+H GLVEEG +++ M++ Y + P +H +C+VDLL R+ + E
Sbjct: 611 NVKPNEITFLSLLSACAHAGLVEEGKNVFAKMQS-YSVKPNLKHYTCMVDLLGRSCNLEE 669
Query: 557 AEDFINQMACDADIVVWKSLLAS 579
AE+ + M D VW +LL++
Sbjct: 670 AEELVLSMPIPPDGGVWGALLSA 692
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 165/387 (42%), Gaps = 43/387 (11%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ 113
G+ H I+ PD ++ N +L+MY K G L A F + Q ++ W MI G +
Sbjct: 334 GKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQR-SQGSIEYWNFMIVGYGR 392
Query: 114 NYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA 173
+ I+L+ +M G+ S I +C LG + LGR +H +VIK +
Sbjct: 393 IGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGFVDETISV 452
Query: 174 QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA 233
N+LI MY K D++ + +F+ + +DV W ++I+A + + EA+ F+ M+
Sbjct: 453 TNSLIEMYGKCDKMNVSWRIFNR-SERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQ 511
Query: 234 YQPNEFIFGSVFSACSNFA----------------------------------------R 253
PN V SACS+ A R
Sbjct: 512 -NPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSR 570
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
+F+ + D+ WNA+I+G + A A+ +F+ M + + P+ +T SLL AC
Sbjct: 571 EVFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAG 630
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
+ +G V + + N+ ++ + + L A + + D W +++
Sbjct: 631 LVEEGKNVFAKMQSYSVKPNLKHYTCMVDLLGRSCNLEEAEELVLSMPIPPDGGVWGALL 690
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPD 400
+AC HNQ E R+ + S+ + D
Sbjct: 691 SACKTHNQIEMGIRIGKNAIDSEPEND 717
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 190/467 (40%), Gaps = 52/467 (11%)
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA-FSKLG 216
HA + + + ++ LI++Y + + +F + KD W S + FS+
Sbjct: 30 FHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSL 89
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
Y F ++ PN F F V S+ ++F I
Sbjct: 90 Y--PQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAV 147
Query: 255 -------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR---D 292
+F+EI D+ +W AL+ G + + + SEM D
Sbjct: 148 GSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGD 207
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
P+ T+ AC L G +H ++K G + + +++L+MY KC V
Sbjct: 208 DSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPRE 267
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A F E+ N D +SW S+I + + R F ML +Q+ PD + ++
Sbjct: 268 AYQSFSEV-INKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFG 326
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+ H I + A D V N L+ +Y K G L A +LF + + W+
Sbjct: 327 NSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQRSQG-SIEYWNF 385
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
+I+GY + G + ++LF M+ LG+ V +V + +C +G + G ++ + +
Sbjct: 386 MIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGF 445
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ T + ++++ + ++ + N+ + D+++W +L+++
Sbjct: 446 -VDETISVTNSLIEMYGKCDKMNVSWRIFNR--SERDVILWNALISA 489
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 14/300 (4%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IR I++C L + LGR +H +++ + + N ++ MYGKC + +
Sbjct: 411 IRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSW 470
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F++ +R+V+ W A+I+ +AI L+ M+ P T ++ ACS L
Sbjct: 471 RIFNR-SERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLA 529
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ G +LH ++ + +L AL+ MY K ++ +R VF + KDV W +MI+
Sbjct: 530 FLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMIS 589
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS---- 261
+ GY A+ FN ++ +PNE F S+ SAC++ + +F ++ S
Sbjct: 590 GYGMNGYAESAIEIFN-LMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKMQSYSVK 648
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
P+L + ++ + N EA L M + PDG +LL AC + G+++
Sbjct: 649 PNLKHYTCMVDLLGRSCNLEEAEELVLSM---PIPPDGGVWGALLSACKTHNQIEMGIRI 705
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 145/312 (46%), Gaps = 10/312 (3%)
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-----ARILFNEIDSPD 263
+ + SK L++L F+ + N FI + S + LF+ + D
Sbjct: 14 LISLSKRITTLQSLLPFHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKD 73
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
WN+ + + S S + +S +S MR +LP+ T + + + + GM +H+
Sbjct: 74 TFLWNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHA 133
Query: 324 YIIKMGF-DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
K+GF N V ++ +++Y++C + +A+ VF E+ D V+W +++ +Q+ ++
Sbjct: 134 LACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVR-DVVAWTALVIGYVQNGES 192
Query: 383 EELFRLFSRMLA---SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
E S M KP+ T AC + L LH + K G+ + +
Sbjct: 193 EMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQ 252
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
+ ++ +Y KCG A + F+ + N D++SW+S+I YA+FG + ++ F M V
Sbjct: 253 SSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVC 312
Query: 500 PNLVTLVGVLTA 511
P+ + + +L+
Sbjct: 313 PDGMVIGCILSG 324
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 83/187 (44%), Gaps = 6/187 (3%)
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M S +K DH +++ ++ +L+ + H TG + + F+ L+ +Y
Sbjct: 2 MRISMLKLDH---GELISLSKRITTLQSLLPFHAVTVTTGNSTNPFIAAKLISLYDTLNH 58
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
S+ LF+ + D W+S + + L ++ MRS V PN T V ++
Sbjct: 59 PTSSSTLFHSLPFKDTFLWNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASS 118
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHC-SCVVDLLARAGCVHEAEDFINQMACDADI 570
+H ++ G++L+ + + G P S V L +R +++A +++ D+
Sbjct: 119 YAHFMMIRSGMNLH-ALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPV-RDV 176
Query: 571 VVWKSLL 577
V W +L+
Sbjct: 177 VAWTALV 183
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 164/482 (34%), Positives = 247/482 (51%), Gaps = 47/482 (9%)
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKS-EHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
G ++K S+ LGR +HA ++K+ + N LI MY+K D AR V
Sbjct: 9 LGLLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLT 68
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA---------- 247
++V SW S+++ ++ G+ AL F EM G PN+F F VF A
Sbjct: 69 PARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGV-APNDFTFPCVFKAVASLRLPVTG 127
Query: 248 -------------------CSNF-----------ARILFNEIDSPDLASWNALIAGVASH 277
CS F AR LF+EI +L +WNA I+ +
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTD 187
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
EA+ F E R P+ +T L AC L L GMQ+H + + GFD++V V
Sbjct: 188 GRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVY 247
Query: 338 NAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
N ++ Y KC + ++ ++F E+G KNA VSW S++AA +Q+++ E+ L+ R
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFAEMGMKNA--VSWCSLVAAYVQNHEDEKASVLYLRSRKEI 305
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
++ + V+ ACA MA LE+ +H + K + ++FV + L+D+Y KCG + +
Sbjct: 306 VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSE 365
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM--RSLGVSPNLVTLVGVLTACSH 514
+ F+ M ++V+ +SLI GYA G D AL LF M R G +PN +T V +L+ACS
Sbjct: 366 QAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSR 425
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
G VE G+ ++ M++ YGI P EH SC+VD+L RAG V +A +FI +M I VW
Sbjct: 426 AGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWG 485
Query: 575 SL 576
+L
Sbjct: 486 AL 487
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 208/478 (43%), Gaps = 47/478 (9%)
Query: 41 LISACSSLRSLQLGRKVHDHILLS-KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR 99
L+ S S++LGR VH I+ + P L N+++NMY K E AR+ P R
Sbjct: 12 LLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
NVVSWT++++G +QN + A+ + +M + GV P FTF + KA + L G+Q+H
Sbjct: 72 NVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIH 131
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
A +K + + MY K DAR +F I +++ +W + I+ G
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPK 191
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------------------------- 250
EA+ F E G QPN F +ACS+
Sbjct: 192 EAIEAFIEFRRIGG-QPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGL 250
Query: 251 -----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
+ I+F E+ + SW +L+A + +A L+ R +
Sbjct: 251 IDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSD 310
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+ S+L AC G L G +H++ +K + N+ V +A++ MY KC + ++ F E
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDE 370
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS--QIKPDHITFNDVMGACAKMASL 417
+ + + V+ NS+I Q + LF M P+++TF ++ AC++ ++
Sbjct: 371 MPEK-NLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAV 429
Query: 418 EMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSL 473
E ++ + T G+ + ++D+ + G + A + M P + W +L
Sbjct: 430 ENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGAL 487
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 157/342 (45%), Gaps = 36/342 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAY-DFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHD 59
N Y+S+ EA+ A+ +F + I +P+ T+ G ++ACS L LG ++H
Sbjct: 178 NAYISNSVTDGRPKEAIEAFIEFRR----IGGQPNSITFCGFLNACSDGLLLDLGMQMHG 233
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
+ S DV + N +++ YGKC + + + F +M +N VSW +++A QN+++
Sbjct: 234 LVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEK 293
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
A LY++ + V F S++ AC+G+ + LGR +HAH +K+ ++ +AL+
Sbjct: 294 ASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVD 353
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG-AYQPNE 238
MY K I D+ F + K++ + S+I ++ G AL F +M G PN
Sbjct: 354 MYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNY 413
Query: 239 FIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
F S+ SACS AG + M +F M+ +
Sbjct: 414 MTFVSLLSACSR---------------------AGAVEN-----GMKIFDSMKSTYGIEP 447
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
G +S + +GR + + Q +I KM + V A+
Sbjct: 448 GAEHYSCIVDMLGRAGMVE--QAFEFIKKMPIKPTISVWGAL 487
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 194/469 (41%), Gaps = 61/469 (13%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VS L + ++ AL + F + T+ + A +SLR G+++H L K
Sbjct: 80 VSGLAQNGHFSTALFEF-FEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIH--ALAVK 136
Query: 66 CQP--DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
C DV + +MY K +DAR FD++P+RN+ +W A I+ + + +AI+
Sbjct: 137 CGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEA 196
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+I+ + G P TF + ACS + LG Q+H V +S + + N LI Y K
Sbjct: 197 FIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGK 256
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
+I + +F+ + K+ SW S++AA+ + +E E + ++F+ S
Sbjct: 257 CKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQ-NHEDEKASVLYLRSRKEIVETSDFMISS 315
Query: 244 VFSACSNFARI----------------------------------------LFNEIDSPD 263
V SAC+ A + F+E+ +
Sbjct: 316 VLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 375
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDR--ELLPDGLTVHSLLCACIGRLTLYQGMQV 321
L + N+LI G A + A++LF +M R P+ +T SLL AC + GM++
Sbjct: 376 LVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKI 435
Query: 322 -HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
S G + + I+ M + ++ A K++ W ++ AC H
Sbjct: 436 FDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHG 495
Query: 381 Q-------AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
+ AE LF+ L + +H+ ++ A + A V +
Sbjct: 496 KPHLGILAAENLFK-----LDPKDSGNHVLLSNTFAAAGRWAEANTVRE 539
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 160/330 (48%), Gaps = 9/330 (2%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR++ + ++ SW +L++G+A + + + A+ F EMR + P+ T + A
Sbjct: 61 ARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVAS 120
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
G Q+H+ +K G +V V + MY K + +A +F E+ + + +WN+
Sbjct: 121 LRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPER-NLETWNA 179
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
I+ + + +E F +P+ ITF + AC+ L++ Q+H + ++G
Sbjct: 180 YISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSG 239
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
DV V NGL+D Y KC + S+ +F M + VSW SL+ Y Q ++A L+
Sbjct: 240 FDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYL 299
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIME-NEYGIIPTREHCSCVVDLL 548
R R V + + VL+AC+ + +E G +H + + E I S +VD+
Sbjct: 300 RSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVG----SALVDMY 355
Query: 549 ARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ GC+ ++E ++M + ++V SL+
Sbjct: 356 GKCGCIEDSEQAFDEMP-EKNLVTLNSLIG 384
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 6/277 (2%)
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVP--VCNAILTMYAKCSVLCNALLVFKELGK 362
LL I ++ G VH+ I+K DS P + N ++ MY+K +A LV + L
Sbjct: 12 LLKNAISTSSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLR-LTP 69
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
+ VSW S+++ Q+ F M + P+ TF V A A + Q
Sbjct: 70 ARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQ 129
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGC 482
+H K G DVFV D+Y K ARKLF+ + ++ +W++ I G
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGR 189
Query: 483 GDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCS 542
EA++ F R +G PN +T G L ACS L++ G+ ++ ++ G +
Sbjct: 190 PKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRS-GFDTDVSVYN 248
Query: 543 CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++D + + +E +M + V W SL+A+
Sbjct: 249 GLIDFYGKCKQIRSSEIIFAEMGMK-NAVSWCSLVAA 284
>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 175/576 (30%), Positives = 279/576 (48%), Gaps = 38/576 (6%)
Query: 21 AYDF--SQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKC---QPDVVLQNH 75
A+DF N T +++ C+ L L+ G+ +H L+SK + + +
Sbjct: 114 AFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHG--LVSKSGLFAENSAVGSS 171
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ---SGV 132
+ MY KCG +EDA + FD++ R+VVSWTA++ G N ++ +M + G
Sbjct: 172 FVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMRRIGGDGE 231
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
T +AC LG++ GR LH +K+ G + Q++L++MY+K + +A N
Sbjct: 232 KVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHN 291
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-- 250
F + KDV SW S+I ++ G+ E L F +M Y P+ + + N
Sbjct: 292 SFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVY-PDGIVVSCILLGFGNSM 350
Query: 251 -------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
F ++ D NAL++ N A LF DG VH
Sbjct: 351 MVREGKAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLF----------DG--VH 398
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
+ VH YIIK D +V + N+++ MY K L A +F +
Sbjct: 399 EWSKESWNTMVF---GYVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCRTQR- 454
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
D V+WN++I++ E LF M++ ++ P+ T V+ AC + SLE +
Sbjct: 455 -DVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMV 513
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H YI + G +V + L+D+Y KCG L +R+LFN M+ DV+SW+ +I GY G
Sbjct: 514 HQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDA 573
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
+ A+++F +M V PN +T + +L+AC+H G V+EG L+ M+ Y I P +H +C
Sbjct: 574 NSAMEVFQQMEQSNVKPNAITFLSLLSACTHAGYVDEGKQLFDRMQ-YYSIKPNLKHFAC 632
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ DLL R+G + EAED + M D VW +LL++
Sbjct: 633 MADLLGRSGNLQEAEDLVQSMPICPDGGVWGTLLSA 668
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/488 (21%), Positives = 194/488 (39%), Gaps = 97/488 (19%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
++ T G AC +L ++ GR +H + + V+Q+ +L+MY KCG++E+A
Sbjct: 232 KVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHN 291
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
F ++ ++V SWT++I C++ N+ + L+ M V P I+
Sbjct: 292 SFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIVVSCILLGFGNSMM 351
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF------DRILDARNVFS---------- 195
V G+ H +++ + NAL++MY KF +++ D + +S
Sbjct: 352 VREGKAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGVHEWSKESWNTMVFG 411
Query: 196 -------------------------------GIA-------RKDVTSWGSMIAAFSKLGY 217
IA ++DV +W ++I++++ G+
Sbjct: 412 YVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCRTQRDVVTWNTLISSYTHSGH 471
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------- 251
EA+ F+EM+ PN V SAC +
Sbjct: 472 YAEAITLFDEMISE-KLNPNSATLVIVLSACCHLPSLEKGKMVHQYIKEGGFELNVSLGT 530
Query: 252 --------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
+R LFN + D+ SWN +I+G H +AN AM +F +M + P
Sbjct: 531 ALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAMEVFQQMEQSNVKP 590
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+ +T SLL AC + +G Q+ + N+ + + + L A +
Sbjct: 591 NAITFLSLLSACTHAGYVDEGKQLFDRMQYYSIKPNLKHFACMADLLGRSGNLQEAEDLV 650
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD--HITFNDVMGACAKMA 415
+ + D W ++++AC HN+ E R+ + S + D +I +++ G+ K
Sbjct: 651 QSMPICPDGGVWGTLLSACKIHNEIEIGIRVAKCAIESDPENDGYYIMLSNMYGSMGKWD 710
Query: 416 SLEMVTQL 423
E +L
Sbjct: 711 EAERAREL 718
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 139/294 (47%), Gaps = 10/294 (3%)
Query: 237 NEFIFGSVFSACSNFAR-----ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
N FI + S ++F + +F+ + D WN++I S+ N +A + +MR
Sbjct: 63 NVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFLWNSIIKSHFSNGNYFKAFDFYIQMR 122
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVL 350
P+ T+ ++ C L L +G +H + K G F N V ++ + MYAKC V+
Sbjct: 123 YDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGLFAENSAVGSSFVYMYAKCGVM 182
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAE---ELFRLFSRMLASQIKPDHITFNDV 407
+A L+F E+ D VSW +++ + ++ +E E R+ K + T
Sbjct: 183 EDASLMFDEIVVR-DVVSWTALVIGYVHNDDSEKGLECLCEMRRIGGDGEKVNSRTLEGG 241
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
AC + ++ LH KTGL V + L+ +Y KCG++ A F + + DV
Sbjct: 242 FQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQVVDKDV 301
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
SW+S+I A+FG +E L LF M+ V P+ + + +L + +V EG
Sbjct: 302 FSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIVVSCILLGFGNSMMVREG 355
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +SS Y EA+ +D + + +T ++SAC L SL+ G+ VH +I
Sbjct: 460 NTLISSYTHSGHYAEAITLFD-EMISEKLNPNSATLVIVLSACCHLPSLEKGKMVHQYIK 518
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ +V L +++MY KCG LE +R F+ M +++V+SW MI+G + N A++
Sbjct: 519 EGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAME 578
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
++ QM QS V P TF S++ AC+ G V G+QL
Sbjct: 579 VFQQMEQSNVKPNAITFLSLLSACTHAGYVDEGKQL 614
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 130/274 (47%), Gaps = 17/274 (6%)
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
TL + H+ II G +NV + + ++++YA ++ VF + D+ WNSII
Sbjct: 44 TLQSLHKSHALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQK-DTFLWNSII 102
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL- 432
+ + + F + +M P+ T ++ CA++ LE +H ++K+GL
Sbjct: 103 KSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGLF 162
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
A + V + + +Y KCG + A +F+ + DVVSW++L++GY ++ L+
Sbjct: 163 AENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCE 222
Query: 493 MRSLGVSPNLV---TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD--- 546
MR +G V TL G AC ++G + G L+ + + T CS VV
Sbjct: 223 MRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLA------VKTGLGCSQVVQSSL 276
Query: 547 --LLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++ G V EA + Q+ D D+ W S++
Sbjct: 277 LSMYSKCGNVEEAHNSFCQVV-DKDVFSWTSVIG 309
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 172/558 (30%), Positives = 272/558 (48%), Gaps = 59/558 (10%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQ--RNVVSWTAMIAG--CSQNYQENDAIKLYIQMLQ 129
N +L+ Y + G L A F P R+ V+WT MI + + +DA+ L+ ML+
Sbjct: 70 NRMLSGYSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLR 129
Query: 130 SGVMPGQFTFGSII---KACSGLGSVCLGRQLHAHVIK-SEHGSHLIAQNALIAMYTKFD 185
GV P + T +++ A G + + LH +K S+++ N L+ Y K
Sbjct: 130 EGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHG 189
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ AR VF + +D ++ +M+ SK G EAL F M G F F +V
Sbjct: 190 LLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKG-LAATRFTFSTVL 248
Query: 246 SA---------------------------------------CSNFARILFNEIDSPDLAS 266
+ C + + LF+E+ D S
Sbjct: 249 TVATGVGDLCLGRQVHGLVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVS 308
Query: 267 WNALIAGVASHSNANEAMSLFSEMR----DRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+N +IAG A + A+ + LF EM+ DR+ LP SLL + G Q+H
Sbjct: 309 YNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALP----YASLLSVAGSVPHIGIGKQIH 364
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS-VSWNSIIAACLQHNQ 381
+ ++ +G S V NA++ MY+KC +L A F + KN + VSW ++I C+Q+ Q
Sbjct: 365 AQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNF--INKNDKTGVSWTAMITGCVQNGQ 422
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
EE +LF M + + PD TF+ + A + +A + + QLH Y+ ++G VF +
Sbjct: 423 QEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSA 482
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+D+Y KCG L A + F+ M + +SW+++I YA +G A+K+F M G P+
Sbjct: 483 LLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPD 542
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
VT + VL+ACSH GL EE + + +ME EYGI P +EH SCV+D L R G + ++ +
Sbjct: 543 SVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEML 602
Query: 562 NQMACDADIVVWKSLLAS 579
+M + D ++W S+L S
Sbjct: 603 GEMPFEDDPIIWSSILHS 620
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 237/504 (47%), Gaps = 44/504 (8%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
+VV+ N +L+ Y K G L AR F +MP R+ V++ AM+ GCS+ +A+ L+ M
Sbjct: 174 NVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMR 233
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
+ G+ +FTF +++ +G+G +CLGRQ+H V ++ S++ N+L+ Y+K D +
Sbjct: 234 RKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARAT-SSNVFVNNSLLDFYSKCDCLD 292
Query: 189 DARNVFSGIARKDVTSWGSMIAAFS---------KLGYELEALCHFNEMLHHGAY----- 234
+ + +F + +D S+ MIA ++ +L E+++L + L + +
Sbjct: 293 EMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAG 352
Query: 235 -------------------QPNEFIFGS----VFSACSNFARILFNEIDSPDLA--SWNA 269
+E + G+ ++S C N I+ D SW A
Sbjct: 353 SVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTA 412
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
+I G + EA+ LF MR L PD T S + A + G Q+HSY+I+ G
Sbjct: 413 MITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSG 472
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
S+V +A+L MY KC L AL F E+ + +S+SWN++I+A + QA+ ++F
Sbjct: 473 HMSSVFSGSALLDMYTKCGCLDEALQTFDEMPER-NSISWNAVISAYAHYGQAKNAIKMF 531
Query: 390 SRMLASQIKPDHITFNDVMGACAKMA-SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
ML KPD +TF V+ AC+ + E + + G++ + ++D +
Sbjct: 532 EGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGR 591
Query: 449 CGSLGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
G +++ M D + WSS++ G D A ++ S+G S + V
Sbjct: 592 VGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMG-STDATPYVI 650
Query: 508 VLTACSHVGLVEEGLHLYRIMENE 531
+ + G E+ + +IM +
Sbjct: 651 LSNIFAKAGKWEDAAGVKKIMRDR 674
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 130/213 (61%), Gaps = 1/213 (0%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
YA L+S S+ + +G+++H ++L + ++ N +++MY KCG L+ A+ F
Sbjct: 344 YASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKN 403
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+ VSWTAMI GC QN Q+ +A++L+ M ++G+ P + TF S IKA S L + LGRQ
Sbjct: 404 DKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQ 463
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
LH+++I+S H S + + +AL+ MYTK + +A F + ++ SW ++I+A++ G
Sbjct: 464 LHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQ 523
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
A+ F ML +G ++P+ F SV SACS+
Sbjct: 524 AKNAIKMFEGMLCYG-FKPDSVTFLSVLSACSH 555
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 168/405 (41%), Gaps = 56/405 (13%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T++ +++ + + L LGR+VH ++ +V + N +L+ Y KC L++ + F +M
Sbjct: 243 TFSTVLTVATGVGDLCLGRQVHG-LVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEM 301
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R+ VS+ MIAG + N + ++L+ +M + S++ + + +G+
Sbjct: 302 IERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGK 361
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+HA ++ S + NALI MY+K + A+ F K SW +MI + G
Sbjct: 362 QIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNG 421
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
+ EAL F M G P+ F S A SN A I
Sbjct: 422 QQEEALQLFCGMRRAG-LSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSG 480
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
F+E+ + SWNA+I+ A + A A+ +F M
Sbjct: 481 SALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFK 540
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA----ILTMYAKCSVLCN 352
PD +T S+L AC + M+ Y M ++ + ++ +
Sbjct: 541 PDSVTFLSVLSACSHNGLAEECMK---YFELMEYEYGISPWKEHYSCVIDTLGRVGRFDK 597
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQH-NQ------AEELFRLFS 390
+ E+ D + W+SI+ +C H NQ AE+LF + S
Sbjct: 598 VQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGS 642
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 2/147 (1%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
C QN E + + +T++ I A S+L + LGR++H +++ S
Sbjct: 417 CVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSS 476
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
V + +L+MY KCG L++A FD+MP+RN +SW A+I+ + Q +AIK++ ML
Sbjct: 477 VFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLC 536
Query: 130 SGVMPGQFTFGSIIKACS--GLGSVCL 154
G P TF S++ ACS GL C+
Sbjct: 537 YGFKPDSVTFLSVLSACSHNGLAEECM 563
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 14/224 (6%)
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
L +HSL+ + GRL Q + +M +N N +L+ Y++ L A +F
Sbjct: 39 LLLHSLISS--GRLA-----QARALFDQMPHRNNAFSLNRMLSGYSRSGQLSAAHHLFLS 91
Query: 360 LGKN-ADSVSWNSIIAA--CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG---ACAK 413
+ D+V+W +I A +A + LF ML + PD +T V+ A
Sbjct: 92 SPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLNLPPASGG 151
Query: 414 MASLEMVTQLHCYITKTGLAF-DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
A+ ++ LH + K GL +V V N L+D Y K G L +AR++F M + D V++++
Sbjct: 152 TAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNA 211
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
+++G ++ G EAL LF MR G++ T VLT + VG
Sbjct: 212 MMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVG 255
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 272/542 (50%), Gaps = 40/542 (7%)
Query: 65 KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
+ +P+V+ N + + + G + DA F MP+R+ ++ AM+AG Y N + L
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAG----YSANGRLPLA 88
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA----------HVIKSEHGSH---- 170
+ ++ P +++ +++ A + S+ R L +V+ S H +H
Sbjct: 89 ASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVS 148
Query: 171 -------------LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
++ N ++A Y + R+ +AR +F+ DV SW ++++ + + G
Sbjct: 149 LARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGK 208
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASH 277
EA F+ M N + G AR LF+ D+ +W A+++G A +
Sbjct: 209 MSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQN 268
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
EA +F M +R + ++ ++++ A I R + + + + M NV
Sbjct: 269 GMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKE----LFNMMPCRNVASW 320
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
N +LT YA+ +L A VF + + D+VSW +++AA Q +EE +LF M
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFDTMPQK-DAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGE 379
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
+ F V+ CA +A+LE QLH + + G FV N L+ +Y KCG++ AR
Sbjct: 380 WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARN 439
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
F ME DVVSW+++I GYA+ G G EAL++F MR+ P+ +TLVGVL ACSH GL
Sbjct: 440 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 499
Query: 518 VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
VE+G+ + M +++G+ EH +C++DLL RAG + EA D + M + D +W +LL
Sbjct: 500 VEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL 559
Query: 578 AS 579
+
Sbjct: 560 GA 561
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 162/396 (40%), Gaps = 89/396 (22%)
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
S+ + DV+ N +++ Y + G + +AR FD+MP R+VVSW M++G ++ +A +L
Sbjct: 187 SRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRL 246
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ + + FT+ +++ + G + R+ V + + ++ NA++A Y +
Sbjct: 247 F----DAAPVRDVFTWTAVVSGYAQNGMLEEARR----VFDAMPERNAVSWNAMVAAYIQ 298
Query: 184 FDRILD--------------------------------ARNVFSGIARKDVTSWGSMIAA 211
R++D A+ VF + +KD SW +M+AA
Sbjct: 299 -RRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAA 357
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
+S+ G E L F EM G + N F V S C++
Sbjct: 358 YSQGGCSEETLQLFIEMGRCGEWV-NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGV 416
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
AR F E++ D+ SWN +IAG A H EA+ +F MR
Sbjct: 417 GCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMR 476
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV----CNAILTMYAKC 347
PD +T+ +L AC + +G+ SY M D V ++ + +
Sbjct: 477 TTSTKPDDITLVGVLAACSHSGLVEKGI---SYFYSMHHDFGVTAKPEHYTCMIDLLGRA 533
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A + K++ DS W +++ A H E
Sbjct: 534 GRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPE 569
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 14/184 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S +A ++S C+ + +L+ G ++H ++ + + N +L MY KCG++EDAR F++
Sbjct: 384 SAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEE 443
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M +R+VVSW MIAG +++ +A++++ M + P T ++ ACS G V G
Sbjct: 444 MEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKG 503
Query: 156 ----RQLHAH---VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGS 207
+H K EH +I + + R+ +A ++ + D T WG+
Sbjct: 504 ISYFYSMHHDFGVTAKPEH------YTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGA 557
Query: 208 MIAA 211
++ A
Sbjct: 558 LLGA 561
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 272/542 (50%), Gaps = 40/542 (7%)
Query: 65 KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
+ +P+V+ N + + + G + DA F MP+R+ ++ AM+AG Y N + L
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAG----YSANGRLPLA 88
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA----------HVIKSEHGSH---- 170
+ ++ P +++ +++ A + S+ R L +V+ S H +H
Sbjct: 89 ASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVS 148
Query: 171 -------------LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
++ N ++A Y + R+ +AR +F+ DV SW ++++ + + G
Sbjct: 149 LARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGK 208
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASH 277
EA F+ M N + G AR LF+ D+ +W A+++G A +
Sbjct: 209 MSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQN 268
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
EA +F M +R + ++ ++++ A I R + + + + M NV
Sbjct: 269 GMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKE----LFNMMPCRNVASW 320
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
N +LT YA+ +L A VF + + D+VSW +++AA Q +EE +LF M
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFDTMPQK-DAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGE 379
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
+ F V+ CA +A+LE QLH + + G FV N L+ +Y KCG++ AR
Sbjct: 380 WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARN 439
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
F ME DVVSW+++I GYA+ G G EAL++F MR+ P+ +TLVGVL ACSH GL
Sbjct: 440 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 499
Query: 518 VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
VE+G+ + M +++G+ EH +C++DLL RAG + EA D + M + D +W +LL
Sbjct: 500 VEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL 559
Query: 578 AS 579
+
Sbjct: 560 GA 561
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 162/396 (40%), Gaps = 89/396 (22%)
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
S+ + DV+ N +++ Y + G + +AR FD+MP R+VVSW M++G ++ +A +L
Sbjct: 187 SRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRL 246
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ + + FT+ +++ + G + R+ V + + ++ NA++A Y +
Sbjct: 247 F----DAAPVRDVFTWTAVVSGYAQNGMLEEARR----VFDAMPERNAVSWNAMVAAYIQ 298
Query: 184 FDRILD--------------------------------ARNVFSGIARKDVTSWGSMIAA 211
R++D A+ VF + +KD SW +M+AA
Sbjct: 299 -RRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAA 357
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
+S+ G E L F EM G + N F V S C++
Sbjct: 358 YSQGGCSEETLQLFIEMGRCGEWV-NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGV 416
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
AR F E++ D+ SWN +IAG A H EA+ +F MR
Sbjct: 417 GCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMR 476
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV----CNAILTMYAKC 347
PD +T+ +L AC + +G+ SY M D V ++ + +
Sbjct: 477 TTSTKPDDITLVGVLAACSHSGLVEKGI---SYFYSMHHDFGVTAKPEHYTCMIDLLGRA 533
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A + K++ DS W +++ A H E
Sbjct: 534 GRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPE 569
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 14/184 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S +A ++S C+ + +L+ G ++H ++ + + N +L MY KCG++EDAR F++
Sbjct: 384 SAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEE 443
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M +R+VVSW MIAG +++ +A++++ M + P T ++ ACS G V G
Sbjct: 444 MEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKG 503
Query: 156 ----RQLHAH---VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGS 207
+H K EH +I + + R+ +A ++ + D T WG+
Sbjct: 504 ISYFYSMHHDFGVTAKPEH------YTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGA 557
Query: 208 MIAA 211
++ A
Sbjct: 558 LLGA 561
>gi|225459429|ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Vitis vinifera]
Length = 700
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 163/511 (31%), Positives = 264/511 (51%), Gaps = 30/511 (5%)
Query: 96 MPQR----NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
MP+R V SW +I+GC QN DA+ ++ +ML P T SI+ AC+GL +
Sbjct: 1 MPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKA 60
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ LG+ +HA +K ++ + ++I MY+K A VF K+ W MIAA
Sbjct: 61 LRLGKAIHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAA 120
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA-----CSNFARILFNEID----SP 262
+ G +AL M G ++P+ + ++ S A L +E+ P
Sbjct: 121 YVNEGKVEDALGLLRSMQKDG-WKPDVITYNTILSGHARNGLKTQAFELLSEMVQMGLKP 179
Query: 263 DLASWNALIAGVASHSNANEAMSLF------------SEMRDRELLPDGLTVHSLLCACI 310
++ S+N LI+G + EA+ +F +E+ + + P+ +T+ L AC
Sbjct: 180 NVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACA 239
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL-GKNADSVSW 369
QG ++H Y ++ GF+ N+ V +A++ MYAKC + +A VF + G+N +VSW
Sbjct: 240 DLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRN--TVSW 297
Query: 370 NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
N+++A + + Q EE +LF ML ++P ITF + AC +A++ LH Y K
Sbjct: 298 NALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAK 357
Query: 430 TGL-AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
L + + L+D+Y KCGS+ A+ +F+ DV W+++I ++ G A
Sbjct: 358 CQLDELKNAIASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFA 417
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLL 548
+F +M LG+ P+ +T V +L+AC+ GLVEEG + ME YG+ T EH +C+V +L
Sbjct: 418 VFVQMELLGILPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGIL 477
Query: 549 ARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
AG + EA DFI QM D +W +LL +
Sbjct: 478 GGAGLLDEALDFIRQMPYPPDACMWATLLQA 508
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 186/406 (45%), Gaps = 28/406 (6%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T A ++ AC+ L++L+LG+ +H L +V ++ +++MY KCGS + A F K
Sbjct: 47 TIASILPACTGLKALRLGKAIHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKA 106
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+N W MIA + DA+ L M + G P T+ +I+ + G
Sbjct: 107 ENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAF 166
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF-------SGIARKDVTSWGSMI 209
+L + +++ ++++ N LI+ + + +A VF G +V +
Sbjct: 167 ELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRP 226
Query: 210 AAFSKLG-----YELEALCHFNEMLHHG-----AYQPNEFIFGSV---FSACSNF--ARI 254
+ G +L C E+ HG ++PN F+ ++ ++ C + A
Sbjct: 227 NPITITGALPACADLNLWCQGKEI--HGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANK 284
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+F ID + SWNAL+AG + EA+ LF EM L P +T L AC
Sbjct: 285 VFFRIDGRNTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAA 344
Query: 315 LYQGMQVHSYIIKMGFDS-NVPVCNAILTMYAKCSVLCNALLVF-KELGKNADSVSWNSI 372
+ G +H Y K D + +A++ MYAKC + +A VF E+ K D WN++
Sbjct: 345 IRFGRGLHGYAAKCQLDELKNAIASALIDMYAKCGSILDAKSVFDSEVEK--DVPLWNAM 402
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
I+A H A F +F +M I PDHITF ++ ACA+ +E
Sbjct: 403 ISAFSVHGMARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVE 448
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 158/330 (47%), Gaps = 28/330 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQN-----------NTNIRIRPSTYAGLISACSSLRSL 51
N +S + L EAL + Q+ N ++R P T G + AC+ L
Sbjct: 185 NVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLW 244
Query: 52 QLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGC 111
G+++H + L + +P++ + + +++MY KC ++ A F ++ RN VSW A++AG
Sbjct: 245 CQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGY 304
Query: 112 SQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE--HGS 169
N Q +A+KL+++ML G+ P TF + AC + ++ GR LH + K +
Sbjct: 305 IYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELK 364
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
+ IA +ALI MY K ILDA++VF KDV W +MI+AFS G A F +M
Sbjct: 365 NAIA-SALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFVQME 423
Query: 230 HHGAYQPNEFIFGSVFSACSNFARI-----LFNEID-----SPDLASWNALIAGVASHSN 279
G P+ F S+ SAC+ + FN ++ + L + ++ +
Sbjct: 424 LLGIL-PDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGL 482
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+EA+ +M PD +LL AC
Sbjct: 483 LDEALDFIRQM---PYPPDACMWATLLQAC 509
>gi|317106770|dbj|BAJ53262.1| JMS10C05.5 [Jatropha curcas]
Length = 638
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 160/524 (30%), Positives = 268/524 (51%), Gaps = 44/524 (8%)
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M RN ++WT++I G + + A+ + +M +SG + T I++ACS G
Sbjct: 1 MLVRNTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFG 60
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+Q H VIK +++ +LIAMYT+ DA VF +A KDV + MI +++
Sbjct: 61 QQFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARA 120
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--------------------------- 248
G +A+ F ML+ G QPN++ F ++ SAC
Sbjct: 121 GNGEKAIRVFINMLNAG-LQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSI 179
Query: 249 -------------SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+ A +F+ + +L SW ALI+G + +A+ F E+ +
Sbjct: 180 GNAIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGV 239
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
D + ++L C L G+Q+H +IK+G+ V + A++ +YAKC L +A +
Sbjct: 240 NFDSSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARM 299
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQ--AEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
VF L + S+N+I+A +++++ E+ LF+ IKPD +TF+ ++ A
Sbjct: 300 VFDGLSSKRIA-SFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLSAN 358
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
++L H Y KTG D+ V N ++ +Y KCGS+ A ++FN M + D +SW+++
Sbjct: 359 HSTLGRGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAM 418
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I YA G G + L LF M +P+ +T++ +L AC++ GL +G+ L+ +ME +YG
Sbjct: 419 ISAYALHGQGAKVLLLFEEMIKKEFAPDEITILSILQACTYSGLFRDGISLFNVMEPKYG 478
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
I P EH +C+VDLL RAG + EA D IN+ ++W++L+
Sbjct: 479 IKPLLEHYACMVDLLGRAGHLSEAMDIINKSPFSKSTLLWRTLV 522
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 194/413 (46%), Gaps = 42/413 (10%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++ ACSS G++ H ++ +VV+ ++ MY + DA FD M ++
Sbjct: 47 ILQACSSPDYRIFGQQFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKD 106
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
V + MI ++ AI+++I ML +G+ P +TF +II AC G + G Q
Sbjct: 107 VRCFNFMILEYARAGNGEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLG 166
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
K + NA+I MY K +A +FS + +++ SW ++I+ +++ G +
Sbjct: 167 LSFKYGFLNETSIGNAIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKK 226
Query: 221 ALCHFNEM--------------LHHGAYQPNEFIFG-----------------------S 243
A+ F E+ + G + G
Sbjct: 227 AVDTFMELHLCGVNFDSSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVD 286
Query: 244 VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANE--AMSLFSEMRDRELLPDG 299
+++ C N AR++F+ + S +AS+NA++AG +S E + LF+ R + PD
Sbjct: 287 LYAKCGNLMSARMVFDGLSSKRIASFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDM 346
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+T LL TL +G H+Y IK GF++++ V NA++TMYAKC + A +F
Sbjct: 347 VTFSRLLSLSANHSTLGRGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNV 406
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
+ + DS+SWN++I+A H Q ++ LF M+ + PD IT ++ AC
Sbjct: 407 M-NDHDSISWNAMISAYALHGQGAKVLLLFEEMIKKEFAPDEITILSILQACT 458
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 173/396 (43%), Gaps = 48/396 (12%)
Query: 27 NNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCG 84
N N ++P+ T+ +ISAC ++ G + + + N I+NMYGK G
Sbjct: 132 NMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIGNAIINMYGKKG 191
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
+A F M RN++SWTA+I+G +++ A+ ++++ GV +I+
Sbjct: 192 MAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNFDSSLLTTILD 251
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
CS ++ LG Q+H VIK + + AL+ +Y K ++ AR VF G++ K + S
Sbjct: 252 GCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMVFDGLSSKRIAS 311
Query: 205 WGSMIAAF---SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------- 254
+ +++A F S+ G E + + FN G +P+ F + S +N + +
Sbjct: 312 FNAILAGFMENSRDGEE-DPIVLFNHFRLDGI-KPDMVTFSRLLSLSANHSTLGRGRCYH 369
Query: 255 ---------------------------------LFNEIDSPDLASWNALIAGVASHSNAN 281
+FN ++ D SWNA+I+ A H
Sbjct: 370 AYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAMISAYALHGQGA 429
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI-IKMGFDSNVPVCNAI 340
+ + LF EM +E PD +T+ S+L AC G+ + + + K G + +
Sbjct: 430 KVLLLFEEMIKKEFAPDEITILSILQACTYSGLFRDGISLFNVMEPKYGIKPLLEHYACM 489
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+ + + L A+ + + + ++ W +++ C
Sbjct: 490 VDLLGRAGHLSEAMDIINKSPFSKSTLLWRTLVNVC 525
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 165/586 (28%), Positives = 281/586 (47%), Gaps = 44/586 (7%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP T ++ +C++L +L LGR VH D+ + + ++ MY G L+ AR
Sbjct: 144 RPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGARE 203
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD M +R+ V W M+ G + A+ L+ M SG P T + C+
Sbjct: 204 VFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEAD 263
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ G QLH +K + N L++MY K + +A +F + R D+ +W MI+
Sbjct: 264 LLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISG 323
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
+ G +AL F +M G QP+ S+ A +
Sbjct: 324 CVQNGLVDDALRLFCDMQKSG-LQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHV 382
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
A+ +F+ S D+ + +I+G + + A+ +F +
Sbjct: 383 DVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLL 442
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ P+ + V S L AC + G ++H Y++K ++ V +A++ MY+KC L
Sbjct: 443 ALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLD 502
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+ +F ++ D V+WNS+I++ Q+ + EE LF +M+ +K +++T + ++ AC
Sbjct: 503 LSHYMFSKMSAK-DEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSAC 561
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
A + ++ ++H I K + D+F + L+D+Y KCG+L A ++F M + VSW+
Sbjct: 562 AGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWN 621
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
S+I Y G E++ L M+ G + VT + +++AC+H G V+EGL L+R M E
Sbjct: 622 SIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEE 681
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
Y I P EH SC+VDL +RAG + +A FI M D +W +LL
Sbjct: 682 YHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALL 727
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 156/593 (26%), Positives = 262/593 (44%), Gaps = 60/593 (10%)
Query: 40 GLISACSSLRSLQLGRKVHDHI----LLSKCQP-DVVLQNHILNMYGKCGSLEDARMGFD 94
L+ C + L LG ++H LL P LQ ++ MY DA F
Sbjct: 41 ALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDAVAVFS 100
Query: 95 KMPQRNV---VSWTAMIAGCSQNYQENDAIKLYIQML--QSGVMPGQFTFGSIIKACSGL 149
+P+ + W +I G + A+ Y++M S P T ++K+C+ L
Sbjct: 101 SLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAAL 160
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G++ LGR +H + +ALI MY + AR VF G+ +D W M+
Sbjct: 161 GALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMM 220
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------------- 254
+ K G A+ F M G PN S C+ A +
Sbjct: 221 DGYVKAGDVASAVGLFRVMRASGC-DPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGL 279
Query: 255 -------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
LF + DL +WN +I+G + ++A+ LF +
Sbjct: 280 EPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCD 339
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M+ L PD +T+ SLL A QG ++H YI++ +V + +A++ +Y KC
Sbjct: 340 MQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRD 399
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ A VF + K+ D V +++I+ + + +E ++F +LA IKP+ + +
Sbjct: 400 VRMAQNVF-DATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLP 458
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
ACA MA++ + +LH Y+ K +V + LMD+Y KCG L + +F+ M D V+
Sbjct: 459 ACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVT 518
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+S+I +AQ G +EAL LF +M GV N VT+ +L+AC+ + + G ++ I+
Sbjct: 519 WNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIII 578
Query: 530 NEYGIIPTREHC---SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P R S ++D+ + G + A M + + V W S++++
Sbjct: 579 KG----PIRADLFAESALIDMYGKCGNLELALRVFEHMP-EKNEVSWNSIISA 626
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 227/500 (45%), Gaps = 62/500 (12%)
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS----EHGSHLIA-QNALIAMYTKFDRIL 188
P + ++++ C + LG ++HA + S G A Q L+ MY R
Sbjct: 34 PCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFR 93
Query: 189 DARNVFSGIARKDVT---SWGSMIAAFSKLGYELEALCHFNEML-HHGAYQPNEFIFGSV 244
DA VFS + R W +I F+ G+ A+ + +M H + +P+ V
Sbjct: 94 DAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYV 153
Query: 245 FSACSNF----------------------------------------ARILFNEIDSPDL 264
+C+ AR +F+ +D D
Sbjct: 154 VKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDC 213
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
WN ++ G + A+ LF MR P+ T+ L C L G+Q+H+
Sbjct: 214 VLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTL 273
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
+K G + V V N +++MYAKC L A +F + ++ D V+WN +I+ C+Q+ ++
Sbjct: 274 AVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRD-DLVTWNGMISGCVQNGLVDD 332
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
RLF M S ++PD +T ++ A ++ + ++H YI + DVF+++ L+D
Sbjct: 333 ALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVD 392
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
IY KC + A+ +F+ ++ DVV S++I GY + A+K+F + +LG+ PN V
Sbjct: 393 IYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVM 452
Query: 505 LVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHC---SCVVDLLARAGCVHEAED 559
+ L AC+ + + G LH Y +++N Y C S ++D+ ++ G + +
Sbjct: 453 VASTLPACASMAAMRIGQELHGY-VLKNAY-----EGRCYVESALMDMYSKCGRLDLSHY 506
Query: 560 FINQMACDADIVVWKSLLAS 579
++M+ D V W S+++S
Sbjct: 507 MFSKMSAK-DEVTWNSMISS 525
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 197/434 (45%), Gaps = 50/434 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + L ++AL + + ++ T A L+ A + L + G+++H +I+
Sbjct: 318 NGMISGCVQNGLVDDALRLF-CDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIV 376
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ DV L + ++++Y KC + A+ FD +VV + MI+G N A+K
Sbjct: 377 RNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVK 436
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ +L G+ P S + AC+ + ++ +G++LH +V+K+ + ++AL+ MY+
Sbjct: 437 MFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYS 496
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K R+ + +FS ++ KD +W SMI++F++ G EAL F +M+ G + N
Sbjct: 497 KCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGV-KYNNVTIS 555
Query: 243 SVFSACSNFARI----------------------------------------LFNEIDSP 262
S+ SAC+ I +F +
Sbjct: 556 SILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEK 615
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+ SWN++I+ +H E++ L M++ D +T +L+ AC + +G+++
Sbjct: 616 NEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLF 675
Query: 323 SYII-KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
+ + + V + ++ +Y++ L A+ ++ D+ W +++ AC H
Sbjct: 676 RCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRN 735
Query: 382 AE-------ELFRL 388
E ELF+L
Sbjct: 736 VELAEIASQELFKL 749
>gi|356509887|ref|XP_003523674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Glycine max]
Length = 750
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 178/619 (28%), Positives = 298/619 (48%), Gaps = 53/619 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ SL ++L+ L + + +N+ T ++SA + L L G +H
Sbjct: 75 NSFLKSLFSRSLFPRVLSLFSHMRA-SNLSPNHFTLPIVVSAAAHLTLLPHGASLH---A 130
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
L+ +++Y +CG +E AR FD++P+R+VV+WTA+I G N + ++
Sbjct: 131 LASKTGLFHSSASFVSLYSRCGRMELARKVFDEIPKRDVVAWTALIIGHVHNGEPEKGLR 190
Query: 123 LYIQM---LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
+ ++ P T+ AC LG+V G LH V+K+ S + Q++++
Sbjct: 191 CLRHVHGVVEDDEKPNAKTWEGGFLACGNLGAVSEGSCLHGVVVKNGVASFI--QSSVLD 248
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY+K +A F + KD+ W S+I ++++G E L F EM +P+
Sbjct: 249 MYSKCGVPREAYRSFCEVIHKDLLCWTSVIGVYARIGMMGECLRLFREM-QENEIRPDGV 307
Query: 240 IFGSVFSACSN---------FARILFNEIDSPD------------------LAS------ 266
+ G V S N F ++ D LA
Sbjct: 308 VVGCVLSGFGNSMDVFQGKAFHGVIIRRYYVDDEKVNDSLLFMYCKFGMLSLAERIFPLC 367
Query: 267 ------WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
WN ++ G + + LF EM+ + + + + S + +C + G
Sbjct: 368 QGSGDGWNFMVFGYGKVGENVKCVELFREMQWLGIHSETIGIASAIASCAQLGAVNLGRS 427
Query: 321 VHSYIIKMGFD-SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+H +IK D N+ V N+++ MY KC + A +F D VSWN++I++ +
Sbjct: 428 IHCNVIKGFLDGKNISVTNSLVEMYGKCGKMTFAWRIFNT--SETDVVSWNTLISSHVHI 485
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
Q EE LFS+M+ KP+ T V+ AC+ +ASLE ++HCYI ++G ++ +
Sbjct: 486 KQHEEAVNLFSKMVREDQKPNTATLVVVLSACSHLASLEKGERVHCYINESGFTLNLPLG 545
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
L+D+Y KCG L +R +F+ M DV+ W+++I GY G + AL++F M V
Sbjct: 546 TALIDMYAKCGQLQKSRMVFDSMMEKDVICWNAMISGYGMNGYAESALEIFQHMEESNVM 605
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
PN +T + +L+AC+H GLVEEG +++ M++ Y + P +H +C+VDLL R G V EAE
Sbjct: 606 PNGITFLSLLSACAHAGLVEEGKYMFARMKS-YSVNPNLKHYTCMVDLLGRYGNVQEAEA 664
Query: 560 FINQMACDADIVVWKSLLA 578
+ M D VW +LL
Sbjct: 665 MVLSMPISPDGGVWGALLG 683
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/589 (23%), Positives = 255/589 (43%), Gaps = 68/589 (11%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMY-------GKCGSLEDARMGF 93
LI +R+L + H + S ++ + + ++++Y C +L F
Sbjct: 10 LILVSKHIRTLDSLLRFHALTVTSGHSTNLFMASKLISLYDSLNNDPSSCSTL------F 63
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
+P ++ + + + + L+ M S + P FT ++ A + L +
Sbjct: 64 HSLPSKDTFLYNSFLKSLFSRSLFPRVLSLFSHMRASNLSPNHFTLPIVVSAAAHLTLLP 123
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
G LHA K+ + + +++Y++ R+ AR VF I ++DV +W ++I
Sbjct: 124 HGASLHALASKT---GLFHSSASFVSLYSRCGRMELARKVFDEIPKRDVVAWTALIIGHV 180
Query: 214 KLGYE---LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------- 254
G L L H + ++ +PN + F AC N +
Sbjct: 181 HNGEPEKGLRCLRHVHGVVEDDE-KPNAKTWEGGFLACGNLGAVSEGSCLHGVVVKNGVA 239
Query: 255 ----------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
F E+ DL W ++I A E + LF EM++
Sbjct: 240 SFIQSSVLDMYSKCGVPREAYRSFCEVIHKDLLCWTSVIGVYARIGMMGECLRLFREMQE 299
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
E+ PDG+ V +L + ++QG H II+ + + V +++L MY K +L
Sbjct: 300 NEIRPDGVVVGCVLSGFGNSMDVFQGKAFHGVIIRRYYVDDEKVNDSLLFMYCKFGMLSL 359
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A +F + D WN ++ + + + LF M I + I + +CA
Sbjct: 360 AERIFPLCQGSGD--GWNFMVFGYGKVGENVKCVELFREMQWLGIHSETIGIASAIASCA 417
Query: 413 KMASLEMVTQLHCYITKTGL-AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
++ ++ + +HC + K L ++ V N L+++Y KCG + A ++FN E DVVSW+
Sbjct: 418 QLGAVNLGRSIHCNVIKGFLDGKNISVTNSLVEMYGKCGKMTFAWRIFNTSET-DVVSWN 476
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIME 529
+LI + +EA+ LF++M PN TLV VL+ACSH+ +E+G +H Y
Sbjct: 477 TLISSHVHIKQHEEAVNLFSKMVREDQKPNTATLVVVLSACSHLASLEKGERVHCYI--- 533
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
NE G + ++D+ A+ G + ++ + M + D++ W ++++
Sbjct: 534 NESGFTLNLPLGTALIDMYAKCGQLQKSRMVFDSMM-EKDVICWNAMIS 581
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 182/424 (42%), Gaps = 56/424 (13%)
Query: 32 RIRPSTYAGLISAC------SSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS 85
IRP G++ C +S+ Q G+ H I+ D + + +L MY K G
Sbjct: 301 EIRPD---GVVVGCVLSGFGNSMDVFQ-GKAFHGVIIRRYYVDDEKVNDSLLFMYCKFGM 356
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
L A F + Q + W M+ G + + ++L+ +M G+ S I +
Sbjct: 357 LSLAERIF-PLCQGSGDGWNFMVFGYGKVGENVKCVELFREMQWLGIHSETIGIASAIAS 415
Query: 146 CSGLGSVCLGRQLHAHVIKS-EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
C+ LG+V LGR +H +VIK G ++ N+L+ MY K ++ A +F+ + DV S
Sbjct: 416 CAQLGAVNLGRSIHCNVIKGFLDGKNISVTNSLVEMYGKCGKMTFAWRIFN-TSETDVVS 474
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------ 252
W ++I++ + EA+ F++M+ +PN V SACS+ A
Sbjct: 475 WNTLISSHVHIKQHEEAVNLFSKMVREDQ-KPNTATLVVVLSACSHLASLEKGERVHCYI 533
Query: 253 ----------------------------RILFNEIDSPDLASWNALIAGVASHSNANEAM 284
R++F+ + D+ WNA+I+G + A A+
Sbjct: 534 NESGFTLNLPLGTALIDMYAKCGQLQKSRMVFDSMMEKDVICWNAMISGYGMNGYAESAL 593
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
+F M + ++P+G+T SLL AC + +G + + + + N+ ++ +
Sbjct: 594 EIFQHMEESNVMPNGITFLSLLSACAHAGLVEEGKYMFARMKSYSVNPNLKHYTCMVDLL 653
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
+ + A + + + D W +++ C HNQ E R+ A ++P++ +
Sbjct: 654 GRYGNVQEAEAMVLSMPISPDGGVWGALLGHCKTHNQIEMGIRIAK--YAIDLEPENDGY 711
Query: 405 NDVM 408
+M
Sbjct: 712 YIIM 715
>gi|242032375|ref|XP_002463582.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
gi|241917436|gb|EER90580.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
Length = 610
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 157/487 (32%), Positives = 240/487 (49%), Gaps = 42/487 (8%)
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P TF +++K C+ + GR +HA + S +A AL MY K R +DAR V
Sbjct: 57 PVLRTFTALLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARRV 116
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML-HHGAYQPNEFIFGSVFSACSNF- 251
F + +D +W +++A +++ G A+ M G QP+ SV AC++
Sbjct: 117 FDRMPARDRVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADAR 176
Query: 252 ---------------------------------------ARILFNEIDSPDLASWNALIA 272
AR +F+ + + SWNA+I
Sbjct: 177 VLGACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMID 236
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A + NA+EA++LF M + V + L AC L + +VH ++++G S
Sbjct: 237 GYAENGNASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRVGLKS 296
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
NV V NA++T Y+KC A F ELG +SWN++I Q+ +E+ RLF+RM
Sbjct: 297 NVSVMNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAERLFARM 356
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
+KPD T V+ A A ++ +H Y + L D++V+ L+D+Y KCG +
Sbjct: 357 QLENVKPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMYSKCGRV 416
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
ARKLF+ + V++W+++I GY G G A++LF M+ G PN T + VL AC
Sbjct: 417 TIARKLFDSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLAAC 476
Query: 513 SHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
SH GLV+EG + M++ YG+ P EH +VDLL RAG V EA FI M + I V
Sbjct: 477 SHAGLVDEGRKYFASMKD-YGLEPGMEHYGTLVDLLGRAGKVDEAWSFIQNMPIEPGISV 535
Query: 573 WKSLLAS 579
+ ++L +
Sbjct: 536 YGAMLGA 542
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 208/475 (43%), Gaps = 48/475 (10%)
Query: 34 RP--STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP T+ L+ C++ L GR VH + + + + NMY KC DAR
Sbjct: 56 RPVLRTFTALLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARR 115
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML--QSGVMPGQFTFGSIIKACSGL 149
FD+MP R+ V+W A++AG ++N A++ ++M + G P T S++ AC+
Sbjct: 116 VFDRMPARDRVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADA 175
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
+ R++HA +++ + A++ Y K + AR VF + ++ SW +MI
Sbjct: 176 RVLGACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMI 235
Query: 210 AAFSKLGYELEALCHFNEMLHHG-----------------------AYQPNEFIFG---- 242
+++ G EAL F M+ G A + +E +
Sbjct: 236 DGYAENGNASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRVGLK 295
Query: 243 ----------SVFSAC--SNFARILFNEID-SPDLASWNALIAGVASHSNANEAMSLFSE 289
+ +S C ++ A FNE+ SWNA+I G + + +A LF+
Sbjct: 296 SNVSVMNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAERLFAR 355
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M+ + PD T+ S++ A Q +H Y I+ D ++ V A++ MY+KC
Sbjct: 356 MQLENVKPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMYSKCGR 415
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ A +F + ++ ++WN++I H + LF M + P+ TF V+
Sbjct: 416 VTIARKLF-DSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLA 474
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
AC+ ++ + + GL + L+D+ + G + A ++F++N
Sbjct: 475 ACSHAGLVDEGRKYFASMKDYGLEPGMEHYGTLVDLLGRAGKVDEA---WSFIQN 526
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 167/388 (43%), Gaps = 42/388 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T ++ AC+ R L R+VH L + V + +L+ Y KCG++E AR FD M
Sbjct: 164 TLVSVLPACADARVLGACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWM 223
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P RN VSW AMI G ++N ++A+ L+ +M+Q GV + ++AC LG + R
Sbjct: 224 PVRNSVSWNAMIDGYAENGNASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEAR 283
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSKL 215
++H +++ S++ NALI Y+K R A + F+ + +K SW +MI F++
Sbjct: 284 RVHELLVRVGLKSNVSVMNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQN 343
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------------- 250
G +A F M +P+ F SV A ++
Sbjct: 344 GCSEDAERLFARMQLEN-VKPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYV 402
Query: 251 ---------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR LF+ + +WNA+I G SH A+ LF EM+
Sbjct: 403 LTALIDMYSKCGRVTIARKLFDSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGS 462
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
LP+ T S+L AC + +G + + + G + + ++ + + + A
Sbjct: 463 LPNETTFLSVLAACSHAGLVDEGRKYFASMKDYGLEPGMEHYGTLVDLLGRAGKVDEAWS 522
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAE 383
+ + + +++ AC H E
Sbjct: 523 FIQNMPIEPGISVYGAMLGACKLHKNVE 550
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
N++ T +I A + + R +H + + + D+ + +++MY KCG + A
Sbjct: 360 NVKPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMYSKCGRVTIA 419
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD R+V++W AMI G + A++L+ +M +G +P + TF S++ ACS
Sbjct: 420 RKLFDSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLAACSHA 479
Query: 150 GSVCLGRQLHA 160
G V GR+ A
Sbjct: 480 GLVDEGRKYFA 490
>gi|302791828|ref|XP_002977680.1| hypothetical protein SELMODRAFT_51483 [Selaginella moellendorffii]
gi|300154383|gb|EFJ21018.1| hypothetical protein SELMODRAFT_51483 [Selaginella moellendorffii]
Length = 571
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 255/518 (49%), Gaps = 47/518 (9%)
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
VV WTAMI G +++ + AI+ + +M ++ V+P + T+ +++ A L GR++H
Sbjct: 1 VVIWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLGAIQDLEQ---GRRIHV 57
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+ ++ + + L+ NAL+ MY + DA VF + +DV SW S+IAA ++ G
Sbjct: 58 RIQETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPA 117
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------------------ 250
A+ F M G +PN + + C +
Sbjct: 118 AMGLFRRMQLQGT-RPNRITLLELLAWCDDPDEGAAIHERAFASGLRSDVPVCNAILNMY 176
Query: 251 -------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
A LF + + SW A++A + ++A+ LF +M D + PD +
Sbjct: 177 AKAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSIAFI 236
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
+++ AC T +H II+ G DS+ V NAI+ YA+C L A F E+ +
Sbjct: 237 TVINACSSAAT---ARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFVEIKER 293
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
D VSW ++I+A + + + +LF ML ++ + +T V+ ACA ++++ +
Sbjct: 294 RDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGASAIKEGRWI 353
Query: 424 H-CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGC 482
H C I V L+D+Y KCGSL A ++F +E PDVVSW+S+I AQ G
Sbjct: 354 HDCVIGYQLERSSSMVATALLDMYGKCGSLEVAARIFGELEQPDVVSWTSIIAATAQNGD 413
Query: 483 GDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY--GIIPTREH 540
G A +LF M+ GV P VT V V+ ACSH GLV+ G + ++ GI T EH
Sbjct: 414 GSSAARLFCAMQLEGVRPVDVTFVSVVAACSHAGLVDLGKEFVTRLRKDHREGIELTLEH 473
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
C C+VDLLARAG + EAE I+ M VW + LA
Sbjct: 474 CGCIVDLLARAGRLEEAECVIDSMPFKPTPAVWMAFLA 511
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 219/485 (45%), Gaps = 55/485 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY ++ A ++ L+ GR++H I + D+V+ N ++ MY C SL DA F+ M
Sbjct: 38 TYVAVLGA---IQDLEQGRRIHVRIQETGYDTDLVVANALMKMYAACSSLADATRVFEAM 94
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+VVSWT++IA ++ A+ L+ +M G P + T ++ C G
Sbjct: 95 DHRDVVSWTSIIAANARAGDFPAAMGLFRRMQLQGTRPNRITLLELLAWCDDPDE---GA 151
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H S S + NA++ MY K R A +F + ++ SW +M+AA + G
Sbjct: 152 AIHERAFASGLRSDVPVCNAILNMYAKAGRFETASELFERMPVRNAVSWTAMMAAMVRAG 211
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR-------ILFNEIDSPDLASWNA 269
+AL F +M G +P+ F +V +ACS+ A I+ DS D A NA
Sbjct: 212 RHDDALRLFRDMEDDG-VEPDSIAFITVINACSSAATARWIHGCIIRGGCDS-DTAVSNA 269
Query: 270 LIAGVASHSNANEAMSLFSEMRD---------------------------RELLPDG--- 299
+I A + EA F E+++ RE+L +G
Sbjct: 270 IIRAYARCGSLKEAYRTFVEIKERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRA 329
Query: 300 --LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD-SNVPVCNAILTMYAKCSVLCNALLV 356
+T+ +++ AC G + +G +H +I + S+ V A+L MY KC L A +
Sbjct: 330 NEVTLITVVNACAGASAIKEGRWIHDCVIGYQLERSSSMVATALLDMYGKCGSLEVAARI 389
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC--AKM 414
F EL + D VSW SIIAA Q+ RLF M ++P +TF V+ AC A +
Sbjct: 390 FGEL-EQPDVVSWTSIIAATAQNGDGSSAARLFCAMQLEGVRPVDVTFVSVVAACSHAGL 448
Query: 415 ASL--EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWS 471
L E VT+L + G+ + ++D+ + G L A + + M P W
Sbjct: 449 VDLGKEFVTRLR-KDHREGIELTLEHCGCIVDLLARAGRLEEAECVIDSMPFKPTPAVWM 507
Query: 472 SLILG 476
+ + G
Sbjct: 508 AFLAG 512
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 12/215 (5%)
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
V W ++I +H + F+ M + + PD IT+ V+GA + LE ++H
Sbjct: 2 VIWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLGA---IQDLEQGRRIHVR 58
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
I +TG D+ V N LM +Y C SL A ++F M++ DVVSW+S+I A+ G A
Sbjct: 59 IQETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPAA 118
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCV 544
+ LF RM+ G PN +TL+ +L C +EG +H +P C+ +
Sbjct: 119 MGLFRRMQLQGTRPNRITLLELLAWCDD---PDEGAAIHERAFASGLRSDVPV---CNAI 172
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+++ A+AG A + +M + V W +++A+
Sbjct: 173 LNMYAKAGRFETASELFERMPVR-NAVSWTAMMAA 206
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 78/136 (57%), Gaps = 1/136 (0%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQ-PDVVLQNHILNMYGKCGSLED 88
+R T +++AC+ +++ GR +HD ++ + + ++ +L+MYGKCGSLE
Sbjct: 326 GVRANEVTLITVVNACAGASAIKEGRWIHDCVIGYQLERSSSMVATALLDMYGKCGSLEV 385
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A F ++ Q +VVSWT++IA +QN + A +L+ M GV P TF S++ ACS
Sbjct: 386 AARIFGELEQPDVVSWTSIIAATAQNGDGSSAARLFCAMQLEGVRPVDVTFVSVVAACSH 445
Query: 149 LGSVCLGRQLHAHVIK 164
G V LG++ + K
Sbjct: 446 AGLVDLGKEFVTRLRK 461
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 23/122 (18%)
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY- 525
VV W+++I GYA+ G A++ F M V P+ +T V VL A +E+G ++
Sbjct: 1 VVIWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLGAIQD---LEQGRRIHV 57
Query: 526 RIMENEY--------GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
RI E Y ++ CS + D A V EA D D+V W S++
Sbjct: 58 RIQETGYDTDLVVANALMKMYAACSSLAD----ATRVFEAMDH-------RDVVSWTSII 106
Query: 578 AS 579
A+
Sbjct: 107 AA 108
>gi|255553021|ref|XP_002517553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543185|gb|EEF44717.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 168/561 (29%), Positives = 281/561 (50%), Gaps = 46/561 (8%)
Query: 2 SNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
+N ++ LC + A+ + S I + T+ LI C + R G V +
Sbjct: 69 TNSHLLQLCLEGKLEHAIKHLN-SMQELKILVEDETFIALIRLCENKRGYTEGDYVFKAV 127
Query: 62 LLSKCQP-DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
L S P V L N +L+MY + L +A F +M +RN+ SW ++ G ++ ++A
Sbjct: 128 LNSLVNPLSVRLGNALLSMYVRFSDLNNAWNVFGRMGERNLFSWNVLVGGYAKAGFFDEA 187
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ LY +ML G+ P +TF ++++C G G+++H HVI+ + + A NALI M
Sbjct: 188 LCLYHRMLWVGIKPDIYTFPCVLRSCGGANDFIRGKEIHCHVIRFGFETDVSAVNALITM 247
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K + AR VF + ++D SW +MI+ + + G +E L F +ML + P+
Sbjct: 248 YVKCGCVGSARTVFDKMLQRDRISWNAMISGYFENGECVEGLNLFLQMLEL-SVDPDLMT 306
Query: 241 FGSVFSACS----------------------------------------NFARILFNEID 260
SV SAC A +F+E +
Sbjct: 307 MTSVISACELLGDDRLGREIHGYVVRTGYGNDVSVHSLLIQMYASLGYWKEAEKVFSETE 366
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D+ SW A+I+G + ++A+ + M ++PD +T+ +L AC L GM+
Sbjct: 367 CRDVVSWTAMISGYEGNLMHDKALETYKNMELAGIVPDEITIACVLSACASLGQLDLGMR 426
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H +MG S V V N+++ MY+KC + AL VF + ++ + +SW SII +N
Sbjct: 427 LHELANRMGLMSFVIVANSLIDMYSKCKCIDKALEVFHCI-QDKNVISWTSIILGLRINN 485
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
++ E F +M +KP+ IT V+ ACA++ +L ++H + KT + ++ F+ N
Sbjct: 486 RSFEALSFFRKM-KRNLKPNSITLISVLSACARIGALMCGKEIHAHALKTAMVYEGFLPN 544
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
++D+Y++CG LG A FN + DV +W+ L+ GYA+ G G A++LF +M V+P
Sbjct: 545 AILDMYVRCGKLGLALNQFNLYKE-DVAAWNILMRGYAEQGQGAMAVELFHKMIESKVNP 603
Query: 501 NLVTLVGVLTACSHVGLVEEG 521
+ VT + +L ACS G+VEE
Sbjct: 604 DDVTYIALLCACSRSGMVEEA 624
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 139/508 (27%), Positives = 246/508 (48%), Gaps = 65/508 (12%)
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS-EHGSHLIAQNALI 178
AIK M + ++ TF ++I+ C G + V+ S + + NAL+
Sbjct: 85 AIKHLNSMQELKILVEDETFIALIRLCENKRGYTEGDYVFKAVLNSLVNPLSVRLGNALL 144
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
+MY +F + +A NVF + +++ SW ++ ++K G+ EALC ++ ML G +P+
Sbjct: 145 SMYVRFSDLNNAWNVFGRMGERNLFSWNVLVGGYAKAGFFDEALCLYHRMLWVGI-KPDI 203
Query: 239 FIFGSVFSAC---SNF-------------------------------------ARILFNE 258
+ F V +C ++F AR +F++
Sbjct: 204 YTFPCVLRSCGGANDFIRGKEIHCHVIRFGFETDVSAVNALITMYVKCGCVGSARTVFDK 263
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC--IGRLTLY 316
+ D SWNA+I+G + E ++LF +M + + PD +T+ S++ AC +G L
Sbjct: 264 MLQRDRISWNAMISGYFENGECVEGLNLFLQMLELSVDPDLMTMTSVISACELLGDDRL- 322
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
G ++H Y+++ G+ ++V V + ++ MYA A VF E + D VSW ++I+
Sbjct: 323 -GREIHGYVVRTGYGNDVSVHSLLIQMYASLGYWKEAEKVFSET-ECRDVVSWTAMISGY 380
Query: 377 ---LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
L H++A E ++ M + I PD IT V+ ACA + L++ +LH + GL
Sbjct: 381 EGNLMHDKALETYK---NMELAGIVPDEITIACVLSACASLGQLDLGMRLHELANRMGLM 437
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
V V N L+D+Y KC + A ++F+ +++ +V+SW+S+ILG EAL F +M
Sbjct: 438 SFVIVANSLIDMYSKCKCIDKALEVFHCIQDKNVISWTSIILGLRINNRSFEALSFFRKM 497
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLV----EEGLHLYRIMENEYGIIPTREHCSCVVDLLA 549
+ + PN +TL+ VL+AC+ +G + E H + G +P + ++D+
Sbjct: 498 KR-NLKPNSITLISVLSACARIGALMCGKEIHAHALKTAMVYEGFLP-----NAILDMYV 551
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLL 577
R G + A + N D+ W L+
Sbjct: 552 RCGKLGLALNQFNLY--KEDVAAWNILM 577
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 158/303 (52%), Gaps = 16/303 (5%)
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS-----NVPVC 337
A+ + M++ ++L + T +L+ C + +G Y+ K +S +V +
Sbjct: 85 AIKHLNSMQELKILVEDETFIALIRLCENKRGYTEG----DYVFKAVLNSLVNPLSVRLG 140
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
NA+L+MY + S L NA VF +G+ + SWN ++ + +E L+ RML I
Sbjct: 141 NALLSMYVRFSDLNNAWNVFGRMGER-NLFSWNVLVGGYAKAGFFDEALCLYHRMLWVGI 199
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
KPD TF V+ +C ++HC++ + G DV +N L+ +Y+KCG +GSAR
Sbjct: 200 KPDIYTFPCVLRSCGGANDFIRGKEIHCHVIRFGFETDVSAVNALITMYVKCGCVGSART 259
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
+F+ M D +SW+++I GY + G E L LF +M L V P+L+T+ V++AC +G
Sbjct: 260 VFDKMLQRDRISWNAMISGYFENGECVEGLNLFLQMLELSVDPDLMTMTSVISACELLGD 319
Query: 518 VEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
G +H Y ++ YG + S ++ + A G EAE ++ C D+V W +
Sbjct: 320 DRLGREIHGY-VVRTGYGNDVSVH--SLLIQMYASLGYWKEAEKVFSETEC-RDVVSWTA 375
Query: 576 LLA 578
+++
Sbjct: 376 MIS 378
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 173/607 (28%), Positives = 285/607 (46%), Gaps = 96/607 (15%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC------------- 83
T + +CSSL +L G+++H + S ++ ++N +++ Y KC
Sbjct: 54 TLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTC 113
Query: 84 ------------------GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
GSL++AR F+KMP + VS+T M+ G +QN +AI ++
Sbjct: 114 SVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFK 173
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M +GV+P + T S+I A S +G + R LHA K + I L+ MY
Sbjct: 174 DMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCS 233
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ +AR +F I ++V +W M+ +SK
Sbjct: 234 SLGNARVLFDEIPERNVVTWNVMLNGYSK------------------------------- 262
Query: 246 SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
S + AR LF I + D+ SW +I G EA+ ++ M + P+ + + L
Sbjct: 263 SGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDL 322
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
+ AC + + +G Q H I++ GFD + I+ YA C + A L F ELG
Sbjct: 323 ISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQF-ELGSKDH 381
Query: 366 SVSWNSIIAACLQH---NQAEELF----------------------------RLFSRMLA 394
SWN++I+ +++ QA +LF +LF M+A
Sbjct: 382 VSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVA 441
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
++P+ IT V A A + +L H YI + + + L+D+Y KCGS+
Sbjct: 442 GGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITI 501
Query: 455 ARKLFNFMEN--PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
A +LF +++ V W+++I G A G + +LKLF++++ + + PN +T +GVL+AC
Sbjct: 502 ALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSAC 561
Query: 513 SHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
H GLV+ G ++ M+N Y I P +H C++DLL RAG + EA + I +M AD+V+
Sbjct: 562 CHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVI 621
Query: 573 WKSLLAS 579
W +LLA+
Sbjct: 622 WGTLLAA 628
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 200/467 (42%), Gaps = 94/467 (20%)
Query: 45 CSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSW 104
CSSL + R + D I + +VV N +LN Y K G ++ AR F+++P ++VVSW
Sbjct: 232 CSSLGN---ARVLFDEI----PERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSW 284
Query: 105 TAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK 164
+I G Q + +A+++Y ML++GV P + +I AC +V G+Q H +++
Sbjct: 285 GTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVR 344
Query: 165 S-----------------------------EHGS--HLIAQNALIAMYTKFDRILDARNV 193
+ E GS H+ + NALI+ + + I AR +
Sbjct: 345 TGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQL 404
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR 253
F + +DV SW SMI+ +S+ AL F+EM+ G QPNE SVFSA +
Sbjct: 405 FDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVA-GGVQPNEITMVSVFSAIATLGT 463
Query: 254 I----------------------------------------LFNEIDS--PDLASWNALI 271
+ LF EI ++ WNA+I
Sbjct: 464 LMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAII 523
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GF 330
G+A H +AN ++ LFS+++ + P+ +T +L AC + G + + +
Sbjct: 524 CGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNI 583
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AE 383
+ N+ ++ + + L A + +++ AD V W +++AAC H AE
Sbjct: 584 EPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEIGERAAE 643
Query: 384 ELFRL-----FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
L +L R+L S I D ++D M S M C
Sbjct: 644 NLAKLDISHGAGRVLLSNIYADAGRWDDAFLVRRAMQSQRMKKSPGC 690
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 173/441 (39%), Gaps = 116/441 (26%)
Query: 232 GAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
G+ +P +FIFGS+ P+L +A + + H + + F+ +
Sbjct: 3 GSPKP-KFIFGSLI----------------PNLKWVSAAPSQLPPHP-IDHLRAFFNGNK 44
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
D + LT+ S L +C L L QG Q+HS + K G SN+ V N++++ Y KC ++
Sbjct: 45 DTQHSDYELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLIS 104
Query: 352 NALLVFK------------------------------ELGKNADSVSWNSIIAACLQHNQ 381
NA +F E VS+ +++ Q+N
Sbjct: 105 NARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNC 164
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
E +F M + + P+ +T V+ A + + + LH K GL V
Sbjct: 165 WLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATN 224
Query: 442 LMDIYIKCGSLGSARKLF-----------NFMEN--------------------PDVVSW 470
L+ +Y C SLG+AR LF N M N DVVSW
Sbjct: 225 LVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSW 284
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--------- 521
++I GY Q EAL+++ M GV PN V +V +++AC V EG
Sbjct: 285 GTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVR 344
Query: 522 -------------LHLY--------RIMENEYGIIPTREHCS---CVVDLLARAGCVHEA 557
+H Y ++ E G +++H S ++ R G + +A
Sbjct: 345 TGFDCYDFIQATIIHFYAACGEINLAFLQFELG---SKDHVSSWNALISGFVRNGMIEQA 401
Query: 558 EDFINQMACDADIVVWKSLLA 578
++M + D+ W S+++
Sbjct: 402 RQLFDEMP-ERDVFSWSSMIS 421
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 9 LCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHIL-LSK 65
+C ++ A V+ +RI+P+ T+ G++SAC + G K + L
Sbjct: 523 ICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYN 582
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-NVVSWTAMIAGC 111
+P++ ++++ G+ G L++A KMP + +VV W ++A C
Sbjct: 583 IEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAAC 629
>gi|302787579|ref|XP_002975559.1| hypothetical protein SELMODRAFT_103498 [Selaginella moellendorffii]
gi|300156560|gb|EFJ23188.1| hypothetical protein SELMODRAFT_103498 [Selaginella moellendorffii]
Length = 547
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 163/539 (30%), Positives = 268/539 (49%), Gaps = 69/539 (12%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+ YA + AC+ L++L+LGR+VH I S + ++ L NH++NMY KCGSL +AR FDK
Sbjct: 25 ANYAQALHACTKLKALELGRQVHFEIHRSGFEENLQLGNHVINMYAKCGSLAEARAFFDK 84
Query: 96 M--PQRNVVSWTAMIAGCSQN-YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
+ +RNV +WTA+++ +Q + + A+ L+ +M GV P TF +++AC +
Sbjct: 85 LSPERRNVFTWTAVMSAYAQTGHCKETALHLFHRMQLEGVRPNLITFAVVLEACDSSRFL 144
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
R LH +++ + L+ Y + DAR F G+ K + SW +MI A+
Sbjct: 145 DDARLLHKLAMENGFDGDSVVGTILVRTYVLCKSLDDARKTFDGLKLKSLVSWTAMIQAY 204
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
++ G + EA + M G QP+ + + C D P
Sbjct: 205 AEKGLDKEAFHLYRGMGQEG-LQPDRVSYLLLLGTC-----------DRP---------- 242
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
E L G +HS L A GF+
Sbjct: 243 ---------------------EKLEVGKRIHSQLAAG-------------------GFER 262
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNA-DSVSWNSIIAACLQHNQAEELFRLFSR 391
+ V A++TMY +C L + VF + ++ D + WN+++ A Q+ +E F LF +
Sbjct: 263 DTAVQIALVTMYGRCGDLEASTSVFSTIERSCDDEICWNAMLGAYGQNGHPDEAFALFRK 322
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
+ +KP +F ++G C SL LH + ++GL + + L+ Y KCG
Sbjct: 323 FMLLGLKPSRPSFLTILGLC---ESLHTARTLHENVVESGLEQEFTIQTALISCYGKCGG 379
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
L A K+F+ ME+ DVVSW+ ++ +A++G G EAL LF +M+ G PN ++ +L+A
Sbjct: 380 LDDASKIFDGMEDHDVVSWTGIVETHARYGRGGEALLLFYKMQQDGSRPNNISFTCILSA 439
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
CSH GLV EG L+ + ++G++P+ + C+VDLL RAG + AE ++++A D ++
Sbjct: 440 CSHAGLVREGCQLFESLVRDHGLVPSELNFGCLVDLLGRAGRLDLAEGCLSRVALDRNL 498
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 150/336 (44%), Gaps = 42/336 (12%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP+ T+A ++ AC S R L R +H + + D V+ ++ Y C SL+DAR
Sbjct: 124 VRPNLITFAVVLEACDSSRFLDDARLLHKLAMENGFDGDSVVGTILVRTYVLCKSLDDAR 183
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD + +++VSWTAMI ++ + +A LY M Q G+ P + ++ ++ C
Sbjct: 184 KTFDGLKLKSLVSWTAMIQAYAEKGLDKEAFHLYRGMGQEGLQPDRVSYLLLLGTCDRPE 243
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR--KDVTSWGSM 208
+ +G+++H+ + Q AL+ MY + + + +VFS I R D W +M
Sbjct: 244 KLEVGKRIHSQLAAGGFERDTAVQIALVTMYGRCGDLEASTSVFSTIERSCDDEICWNAM 303
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--ARIL----------- 255
+ A+ + G+ EA F + + G +P+ F ++ C + AR L
Sbjct: 304 LGAYGQNGHPDEAFALFRKFMLLG-LKPSRPSFLTILGLCESLHTARTLHENVVESGLEQ 362
Query: 256 ------------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
F+ ++ D+ SW ++ A + EA+ LF +M+
Sbjct: 363 EFTIQTALISCYGKCGGLDDASKIFDGMEDHDVVSWTGIVETHARYGRGGEALLLFYKMQ 422
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
P+ ++ +L AC + +G Q+ +++
Sbjct: 423 QDGSRPNNISFTCILSACSHAGLVREGCQLFESLVR 458
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
+ ++ + ++ + + + AC K+ +LE+ Q+H I ++G ++ + N
Sbjct: 4 KESDVLEFLDSLHKGKLSRNEANYAQALHACTKLKALELGRQVHFEIHRSGFEENLQLGN 63
Query: 441 GLMDIYIKCGSLGSARKLFNFM--ENPDVVSWSSLILGYAQFG-CGDEALKLFTRMRSLG 497
++++Y KCGSL AR F+ + E +V +W++++ YAQ G C + AL LF RM+ G
Sbjct: 64 HVINMYAKCGSLAEARAFFDKLSPERRNVFTWTAVMSAYAQTGHCKETALHLFHRMQLEG 123
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLYRI-MENEY------GIIPTREHCSC 543
V PNL+T VL AC +++ L+++ MEN + G I R + C
Sbjct: 124 VRPNLITFAVVLEACDSSRFLDDARLLHKLAMENGFDGDSVVGTILVRTYVLC 176
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 34 RPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
RPS + ++ C SL + R +H++++ S + + +Q +++ YGKCG L+DA F
Sbjct: 332 RPS-FLTILGLCESLHT---ARTLHENVVESGLEQEFTIQTALISCYGKCGGLDDASKIF 387
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
D M +VVSWT ++ ++ + +A+ L+ +M Q G P +F I+ ACS G V
Sbjct: 388 DGMEDHDVVSWTGIVETHARYGRGGEALLLFYKMQQDGSRPNNISFTCILSACSHAGLVR 447
Query: 154 LGRQLHAHVIKSEHG 168
G QL +++ +HG
Sbjct: 448 EGCQLFESLVR-DHG 461
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 162/534 (30%), Positives = 254/534 (47%), Gaps = 109/534 (20%)
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
R HA ++KS N L++ Y + R+ DAR VF I ++ S+ ++++A+++
Sbjct: 36 ARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYAR 95
Query: 215 LGYELEAL-----------CHFNEML----HHG------------AYQPNEFI-----FG 242
LG EA C +N ++ HG A ++F+ F
Sbjct: 96 LGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFA 155
Query: 243 SVFSACS----------------------------------------NFARILFNEIDSP 262
S SAC+ AR +F+ +
Sbjct: 156 SALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPER 215
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
++ SWN+LI + EA+ LF EM PD +T+ S++ AC G +G QVH
Sbjct: 216 NVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVH 275
Query: 323 SYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA----------------- 364
++++K ++ + NA++ MYAKC A +F + +
Sbjct: 276 AHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANV 335
Query: 365 -------------DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+ ++WN +IAA Q+ + EE RLF ++ I P H T+ +V+ AC
Sbjct: 336 EDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNAC 395
Query: 412 AKMASLEMVTQLHCYITKTGLAFD------VFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
+A L++ Q H ++ K G FD VFV N L+D+Y+K GS+ K+F M
Sbjct: 396 GNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR 455
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
D VSW+++I+GYAQ G +AL LF RM +P+ VT++GVL+AC H GLV+EG +
Sbjct: 456 DNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYF 515
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M ++GI P+R+H +C+VDLL RAG + EAE+ IN M + D V+W SLL +
Sbjct: 516 HSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGA 569
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 138/541 (25%), Positives = 221/541 (40%), Gaps = 115/541 (21%)
Query: 47 SLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTA 106
S +L R H IL S + L N +++ Y + G L DAR FD++P RN S+ A
Sbjct: 29 SAPNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNA 88
Query: 107 MIAG----------------------CSQNY-----------QENDAIKLYIQMLQSGVM 133
+++ CS N DA++ M +
Sbjct: 89 LLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFV 148
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
++F S + AC+ G Q+H V +S H + ++AL+ MY K +R DAR V
Sbjct: 149 LNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRV 208
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-- 251
F + ++V SW S+I + + G EAL F EM+ G + P+E SV SAC+
Sbjct: 209 FDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAG-FSPDEVTLSSVMSACAGLAA 267
Query: 252 ---------------------------------------ARILFNEIDSPDLASWNALIA 272
AR +F+ + S + S +++
Sbjct: 268 DREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILT 327
Query: 273 GVASHSNANEAMSLFSEMRDRELL-------------------------------PDGLT 301
G A +N +A +FS+M ++ ++ P T
Sbjct: 328 GYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYT 387
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGF------DSNVPVCNAILTMYAKCSVLCNALL 355
++L AC L G Q H +++K GF +S+V V N+++ MY K + +
Sbjct: 388 YGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAK 447
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF+ + D+VSWN++I Q+ +A++ LF RML S PD +T V+ AC
Sbjct: 448 VFERMAAR-DNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSG 506
Query: 416 SL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSL 473
+ E H G+ ++D+ + G L A +L N M PD V W+SL
Sbjct: 507 LVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASL 566
Query: 474 I 474
+
Sbjct: 567 L 567
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 192/426 (45%), Gaps = 80/426 (18%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++A +SAC++ + + G +VH + S DV +++ +++MY KC EDAR FD M
Sbjct: 153 SFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAM 212
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+RNVVSW ++I QN +A+ L+++M+ +G P + T S++ AC+GL + GR
Sbjct: 213 PERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGR 272
Query: 157 QLHAHVIKSEH-GSHLIAQNALIAMYTKFDR----------------------------- 186
Q+HAH++K + ++ NAL+ MY K R
Sbjct: 273 QVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKS 332
Query: 187 --ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ DA+ VFS + K+V +W +IAA+++ G E EA+ F + L + P + +G+V
Sbjct: 333 ANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQ-LKRDSIWPTHYTYGNV 391
Query: 245 FSACSNFARI----------------------------------------------LFNE 258
+AC N A + +F
Sbjct: 392 LNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFER 451
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ + D SWNA+I G A + A +A+ LF M PD +T+ +L AC + +G
Sbjct: 452 MAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEG 511
Query: 319 MQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
+ HS G + ++ + + L A + ++ DSV W S++ AC
Sbjct: 512 RRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACR 571
Query: 378 QHNQAE 383
H E
Sbjct: 572 LHKNVE 577
>gi|125591533|gb|EAZ31883.1| hypothetical protein OsJ_16048 [Oryza sativa Japonica Group]
Length = 674
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 172/569 (30%), Positives = 284/569 (49%), Gaps = 57/569 (10%)
Query: 64 SKCQPDV-VLQNHILNMYGKCGSLEDARMG-----FDKMPQRNVVSWTAMIAGCSQNYQE 117
++ PD VL+N +LN+Y +AR+ FD MP+RNVVSW + + +
Sbjct: 5 ARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRP 64
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS--EHGSHLIAQN 175
+A++L+++ML+ G P +F +I A QL+ ++K E+ + L +
Sbjct: 65 QEALELFVRMLEDGFRPTPVSFVNIFPAAVA-DDPSWPFQLYGLLVKYGVEYINDLFVVS 123
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH----- 230
+ I M+++F + AR VF A+K+ W +MI + + G EA+ F+++L
Sbjct: 124 SAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSREVP 183
Query: 231 ------------------------------HGAYQPNEFIFGS----VFSACSNF--ARI 254
G ++ I G+ ++S C N A
Sbjct: 184 LDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFD 243
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
LF+ + D+ +WN ++ + E + L EM+ D +T+ ++L A
Sbjct: 244 LFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGD 303
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA--DSVSWNSI 372
L G Q H Y+I+ G + + + ++ MYAK + A VF KNA D V+WN++
Sbjct: 304 LQIGKQAHGYLIRHGIEGE-GLESYLIDMYAKSGRVEMAQRVFDSF-KNAKRDEVTWNAM 361
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS-LEMVTQLHCYITKTG 431
IA Q Q E+ +F ML + ++P +T V+ AC + + Q+HC+ +
Sbjct: 362 IAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRC 421
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
L +VFV L+D+Y KCG + +A +F M V+++++I G Q G G +AL LF
Sbjct: 422 LDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFN 481
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
M+ G+ P+ VT + ++AC++ GLV+EGL LYR M++ +GI T +H CV DLLA+A
Sbjct: 482 SMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDS-FGISATPQHHCCVADLLAKA 540
Query: 552 GCVHEAEDFINQMACDADIV-VWKSLLAS 579
G V EA +FI + + + V +W SLLAS
Sbjct: 541 GRVEEAYEFIEGLGEEGNFVAIWGSLLAS 569
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 202/438 (46%), Gaps = 52/438 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + ++EA+ + + + + T+ ++A S + + LG+++H +++
Sbjct: 154 NTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLI 213
Query: 63 --LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ + P V+L N ++ MY +CG+++ A FD++P++++V+W M+ QN + +
Sbjct: 214 KGMHRTLP-VILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEG 272
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA-QNALIA 179
+ L +M +SG T +++ A S G + +G+Q H ++I+ HG ++ LI
Sbjct: 273 LLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIR--HGIEGEGLESYLID 330
Query: 180 MYTKFDRILDARNVFSGI--ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
MY K R+ A+ VF A++D +W +MIA +++ G +A+ F ML G +P
Sbjct: 331 MYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAG-LEPT 389
Query: 238 EFIFGSVFSACS-----------------------------------------NFARILF 256
SV AC A +F
Sbjct: 390 SVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVF 449
Query: 257 NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
+ ++ +I+G+ H +A++LF+ M+++ L PD +T S + AC +
Sbjct: 450 GGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVD 509
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS-WNSIIAA 375
+G+ ++ + G + + + AK + A + LG+ + V+ W S++A+
Sbjct: 510 EGLALYRSMDSFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLAS 569
Query: 376 CLQHNQAEELFRLFSRML 393
C + +EL +L ++ L
Sbjct: 570 CKAQGK-QELAKLVTKKL 586
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 165/591 (27%), Positives = 297/591 (50%), Gaps = 45/591 (7%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ I T+ ++ AC +L +LG ++H + V + N ++ MYGKCG L AR
Sbjct: 141 VAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGAR 200
Query: 91 MGFDK--MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
+ FD M + + VSW ++I+ +A+ L+ +M + GV +TF + ++
Sbjct: 201 VLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVED 260
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
V LG +H V+KS H + + NALIAMY K R+ DA VF + +D SW ++
Sbjct: 261 PSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTL 320
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL----------FNE 258
++ + +AL +F +M + G +P++ ++ +A +L N
Sbjct: 321 LSGLVQNELYSDALNYFRDMQNSGQ-KPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNG 379
Query: 259 IDS------------------------------PDLASWNALIAGVASHSNANEAMSLFS 288
+DS DL SW +IAG A + EA++LF
Sbjct: 380 LDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFR 439
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+++ + + D + + S+L AC G + ++H Y+ K +++ + NAI+ +Y +
Sbjct: 440 KVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVG 498
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ A F+ + ++ D VSW S+I C+ + E LF + + I+PD I +
Sbjct: 499 HIDYARRAFESI-RSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISAL 557
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
A A ++SL+ ++H ++ + G + + + L+D+Y CG++ ++RK+F+ ++ D++
Sbjct: 558 SATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLI 617
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
W+S+I GCG++A+ LF +M V P+ +T + +L ACSH GL+ EG + IM
Sbjct: 618 LWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIM 677
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ Y + P EH +C+VDLL+R+ + EA F+ M +W +LL +
Sbjct: 678 KYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGA 728
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 166/580 (28%), Positives = 284/580 (48%), Gaps = 51/580 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+ C + ++L G+++H LL K L ++ MYGKCGSL DA FD+M +R
Sbjct: 52 LLDLCVAAKALPQGQQLH--ALLLKSHLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERT 109
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+ SW A++ + + +AI+LY M GV TF S++KAC LG LG ++H
Sbjct: 110 IFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI--ARKDVTSWGSMIAAFSKLGYE 218
+K +G + NALIAMY K + AR +F GI ++D SW S+I+A G
Sbjct: 170 VAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNC 229
Query: 219 LEALCHFNEMLH-----------------------------HGA----------YQPNEF 239
LEAL F M HGA Y N
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANAL 289
Query: 240 IFGSVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
I ++++ C A +F + D SWN L++G+ + ++A++ F +M++ P
Sbjct: 290 I--AMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKP 347
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D ++V +L+ A L +G +VH+Y I+ G DSN+ + N ++ MYAKC + F
Sbjct: 348 DQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAF 407
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
E D +SW +IIA Q+ E LF ++ + D + V+ AC+ + S
Sbjct: 408 -ECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSR 466
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
+ ++H Y+ K LA D+ + N ++++Y + G + AR+ F + + D+VSW+S+I
Sbjct: 467 NFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCC 525
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
G EAL+LF ++ + P+ + ++ L+A +++ +++G ++ + + G
Sbjct: 526 VHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRK-GFFLE 584
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
S +VD+ A G V + + + D+++W S++
Sbjct: 585 GPIASSLVDMYACCGTVENSRKMFHSVK-QRDLILWTSMI 623
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
EAL + +S TNI+ +SA ++L SL+ G+++H ++ + + + +
Sbjct: 533 EALELF-YSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSL 591
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
++MY CG++E++R F + QR+++ WT+MI + N AI L+ +M V+P
Sbjct: 592 VDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDH 651
Query: 137 FTFGSIIKACSGLGSVCLGRQL 158
TF +++ ACS G + G++
Sbjct: 652 ITFLALLYACSHSGLMVEGKRF 673
>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
Length = 641
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 160/527 (30%), Positives = 254/527 (48%), Gaps = 44/527 (8%)
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M +R++ W ++ S+ Q + + + M + P FT +KAC L V G
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 156 RQLHAHVIKS-EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
+H V K GS L ++LI MY K R+++A +F + + D+ +W SM++ F K
Sbjct: 61 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA--RI------------------ 254
G +A+ F M+ P+ ++ SAC+ + R+
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 180
Query: 255 --------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
LF I D+ SW+ +IA + A EA+ +F++M D
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDG 240
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
P+ TV +L AC L QG + H I+ G ++ V V A++ MY KC A
Sbjct: 241 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 300
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML-ASQIKPDHITFNDVMGACAK 413
VF + + D VSW ++I+ + A FS ML + +PD I V+G+C++
Sbjct: 301 AVFSRIPRK-DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSE 359
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ LE H Y+ K G + F+ L+++Y +CGSLG+A K+FN + D V W+SL
Sbjct: 360 LGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSL 419
Query: 474 ILGYAQFGCGDEALKLFTRM-RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
I GY G G +AL+ F M +S V PN VT + +L+ACSH GL+ EGL ++++M N+Y
Sbjct: 420 ITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDY 479
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ P EH + +VDLL R G + A + +M + +LL +
Sbjct: 480 RLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGA 526
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 218/456 (47%), Gaps = 51/456 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLIS--ACSSLRSLQLGRKVHDH 60
N + SL ++ + E L Y FS + +P + ++ AC LR + G +H
Sbjct: 10 NTLLKSLSREKQWEEVL--YHFSHMFRDEE-KPDNFTLPVALKACGELREVNYGEMIHGF 66
Query: 61 ILLS-KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
+ D+ + + ++ MY KCG + +A FD++ + ++V+W++M++G +N
Sbjct: 67 VKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQ 126
Query: 120 AIKLYIQM-LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
A++ + +M + S V P + T +++ AC+ L + LGR +H VI+ + L N+L+
Sbjct: 127 AVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLL 186
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
Y K +A N+F IA KDV SW ++IA + + G EAL FN+M+ G +PN
Sbjct: 187 NCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT-EPNV 245
Query: 239 FIFGSVFSACS----------------------------------------NFARILFNE 258
V AC+ A +F+
Sbjct: 246 ATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSR 305
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGRLTLYQ 317
I D+ SW ALI+G + A+ ++ FS M + PD + + +L +C L Q
Sbjct: 306 IPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQ 365
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
HSY+IK GFDSN + +++ +Y++C L NA VF + D+V W S+I
Sbjct: 366 AKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK-DTVVWTSLITGYG 424
Query: 378 QHNQAEELFRLFSRML-ASQIKPDHITFNDVMGACA 412
H + + F+ M+ +S++KP+ +TF ++ AC+
Sbjct: 425 IHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS 460
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 155/305 (50%), Gaps = 17/305 (5%)
Query: 17 EALVAY-DFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
EAL+ + D + T + +T ++ AC++ L+ GRK H+ + + +V +
Sbjct: 228 EALLVFNDMMDDGTEPNV--ATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTA 285
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY-IQMLQSGVMP 134
+++MY KC S E+A F ++P+++VVSW A+I+G + N + +I+ + I +L++ P
Sbjct: 286 LVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRP 345
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
++ +CS LG + + H++VIK S+ +L+ +Y++ + +A VF
Sbjct: 346 DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF 405
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA-- 252
+GIA KD W S+I + G +AL FN M+ +PNE F S+ SACS+
Sbjct: 406 NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLI 465
Query: 253 -------RILFNEID-SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
+++ N+ +P+L + L+ + + + A+ + M P + +
Sbjct: 466 HEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM---PFSPTPQILGT 522
Query: 305 LLCAC 309
LL AC
Sbjct: 523 LLGAC 527
>gi|414867301|tpg|DAA45858.1| TPA: hypothetical protein ZEAMMB73_727333 [Zea mays]
Length = 805
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 163/567 (28%), Positives = 280/567 (49%), Gaps = 50/567 (8%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+ +C LR+L LG+ +H + D + + ++ +Y K ++D++ F+++ +++
Sbjct: 151 LKSCIELRNLLLGKGMHADSVKLGLSRDKFVGSSLVGLYSKLARMDDSQKAFEEILDKDI 210
Query: 102 VSWTAMIAGCSQNYQEN--DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
VS+T+MI G S+N +A K+ M S + + T S+++ LG++ G+ +H
Sbjct: 211 VSYTSMITGYSENMDSTSWNAFKIVSDMSWSNLEVNRVTLVSLLQVAGNLGAIREGKSVH 270
Query: 160 AHVIKSEHG-SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
+ I+ + G S + + +L+ MY + A V A + V SW +M+A + G
Sbjct: 271 CYSIRRDIGISDEVLETSLVHMYMQCGACQLASAVLKNSA-QSVASWNAMLAGLVRTGQS 329
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------------- 251
A+ + ML+ P+ + +V SAC+
Sbjct: 330 GNAIHYLYIMLYEHKVVPDSVTYANVISACAELCNSGYAASVHAYIIRRSIPLDVVLATA 389
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
++ LFN++ D S+NA+I G + NEA++L EM + P+
Sbjct: 390 LIKVYLKCTRITISKRLFNQLVVKDTVSYNAMIYGYLQNGMVNEAIALLKEMVTECVAPN 449
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+T+ SLL A +G +H + I+ GF SNV + N I+ MY+ C + +A +VF
Sbjct: 450 FVTILSLLAAIADHKDFARGRWIHGFSIRHGFCSNVDIANQIIRMYSGCGKIASARIVFA 509
Query: 359 ELGKNADSVSWNSIIAACL---QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+N + +SW +++ CL Q ELF+L M KPD I + A ++
Sbjct: 510 SF-ENKNLISWTTMMMGCLFCGHGGQTVELFQLL--MQQHDNKPDSIAVMTAIQAVSEFG 566
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
L+ V Q+HC++ + L D MN L+ Y KCG L + LF +E+ D+ SW+S+I
Sbjct: 567 HLKGVKQVHCFVYRALLEKDTKTMNSLITAYAKCGRLDLSVSLFLSLEHRDLDSWNSMIS 626
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
Y G + L++F M ++P+ +T VL+ACSH GL++EGLH+++ M + Y +
Sbjct: 627 AYGMHGFYTKVLEMFKLMEEGNINPDGLTFSSVLSACSHAGLIKEGLHIFQSMTSMYSVR 686
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFIN 562
P EH C VDL++RAG + E FI
Sbjct: 687 PQEEHYGCFVDLMSRAGHLEEGYKFIK 713
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 217/479 (45%), Gaps = 73/479 (15%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+A L C+ +RSL +K+H +L DV+L + IL Y G L R+ F
Sbjct: 49 FALLFQNCTDVRSL---KKLHARVLTLGLGRDVILGSEILICYASLGVLCKTRLCFQGFL 105
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLY--IQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
++ W +++ + +AI LY +++ Q + TFG +K+C L ++ LG
Sbjct: 106 NNDLAEWNSVMVDIFRAGYPEEAILLYRGLKLRQIDLDEKTVTFG--LKSCIELRNLLLG 163
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ +HA +K ++L+ +Y+K R+ D++ F I KD+ S+ SMI +S
Sbjct: 164 KGMHADSVKLGLSRDKFVGSSLVGLYSKLARMDDSQKAFEEILDKDIVSYTSMITGYS-- 221
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVA 275
++ D SWNA
Sbjct: 222 --------------------------------------------ENMDSTSWNAF----- 232
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD-SNV 334
+ S+M L + +T+ SLL + +G VH Y I+ S+
Sbjct: 233 ---------KIVSDMSWSNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYSIRRDIGISDE 283
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSV-SWNSIIAACLQHNQA-EELFRLFSRM 392
+ +++ MY +C A V K +A SV SWN+++A ++ Q+ + L+ +
Sbjct: 284 VLETSLVHMYMQCGACQLASAVLKN---SAQSVASWNAMLAGLVRTGQSGNAIHYLYIML 340
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
++ PD +T+ +V+ ACA++ + +H YI + + DV + L+ +Y+KC +
Sbjct: 341 YEHKVVPDSVTYANVISACAELCNSGYAASVHAYIIRRSIPLDVVLATALIKVYLKCTRI 400
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+++LFN + D VS++++I GY Q G +EA+ L M + V+PN VT++ +L A
Sbjct: 401 TISKRLFNQLVVKDTVSYNAMIYGYLQNGMVNEAIALLKEMVTECVAPNFVTILSLLAA 459
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 196/426 (46%), Gaps = 44/426 (10%)
Query: 29 TNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQ-PDVVLQNHILNMYGKCGSLE 87
+N+ + T L+ +L +++ G+ VH + + D VL+ +++MY +CG+ +
Sbjct: 241 SNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYSIRRDIGISDEVLETSLVHMYMQCGACQ 300
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK-LYIQMLQSGVMPGQFTFGSIIKAC 146
A Q +V SW AM+AG + Q +AI LYI + + V+P T+ ++I AC
Sbjct: 301 LASAVLKNSAQ-SVASWNAMLAGLVRTGQSGNAIHYLYIMLYEHKVVPDSVTYANVISAC 359
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
+ L + +HA++I+ ++ ALI +Y K RI ++ +F+ + KD S+
Sbjct: 360 AELCNSGYAASVHAYIIRRSIPLDVVLATALIKVYLKCTRITISKRLFNQLVVKDTVSYN 419
Query: 207 SMIAAFSKLGYELEALCHFNEML-------------------HHGAYQPNEFIFG----- 242
+MI + + G EA+ EM+ H + +I G
Sbjct: 420 AMIYGYLQNGMVNEAIALLKEMVTECVAPNFVTILSLLAAIADHKDFARGRWIHGFSIRH 479
Query: 243 -------------SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
++S C ARI+F ++ +L SW ++ G + + + LF
Sbjct: 480 GFCSNVDIANQIIRMYSGCGKIASARIVFASFENKNLISWTTMMMGCLFCGHGGQTVELF 539
Query: 288 S-EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
M+ + PD + V + + A L QVH ++ + + + N+++T YAK
Sbjct: 540 QLLMQQHDNKPDSIAVMTAIQAVSEFGHLKGVKQVHCFVYRALLEKDTKTMNSLITAYAK 599
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
C L ++ +F L ++ D SWNS+I+A H ++ +F M I PD +TF+
Sbjct: 600 CGRLDLSVSLFLSL-EHRDLDSWNSMISAYGMHGFYTKVLEMFKLMEEGNINPDGLTFSS 658
Query: 407 VMGACA 412
V+ AC+
Sbjct: 659 VLSACS 664
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 143/332 (43%), Gaps = 40/332 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TYA +ISAC+ L + VH +I+ DVVL ++ +Y KC + ++ F+++
Sbjct: 351 TYANVISACAELCNSGYAASVHAYIIRRSIPLDVVLATALIKVYLKCTRITISKRLFNQL 410
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++ VS+ AMI G QN N+AI L +M+ V P T S++ A + GR
Sbjct: 411 VVKDTVSYNAMIYGYLQNGMVNEAIALLKEMVTECVAPNFVTILSLLAAIADHKDFARGR 470
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H I+ S++ N +I MY+ +I AR VF+ K++ SW +M+ G
Sbjct: 471 WIHGFSIRHGFCSNVDIANQIIRMYSGCGKIASARIVFASFENKNLISWTTMMMGCLFCG 530
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
+ + + F ++ +P+ + A S F +
Sbjct: 531 HGGQTVELFQLLMQQHDNKPDSIAVMTAIQAVSEFGHLKGVKQVHCFVYRALLEKDTKTM 590
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
LF ++ DL SWN++I+ H + + +F M + +
Sbjct: 591 NSLITAYAKCGRLDLSVSLFLSLEHRDLDSWNSMISAYGMHGFYTKVLEMFKLMEEGNIN 650
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
PDGLT S+L AC + +G+ + + M
Sbjct: 651 PDGLTFSSVLSACSHAGLIKEGLHIFQSMTSM 682
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 5/215 (2%)
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
++H+ ++ +G +V + + IL YA VLC L F+ N D WNS++ +
Sbjct: 64 KLHARVLTLGLGRDVILGSEILICYASLGVLCKTRLCFQGFLNN-DLAEWNSVMVDIFRA 122
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
EE L+ + QI D T + +C ++ +L + +H K GL+ D FV
Sbjct: 123 GYPEEAILLYRGLKLRQIDLDEKTVTFGLKSCIELRNLLLGKGMHADSVKLGLSRDKFVG 182
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF--GCGDEALKLFTRMRSLG 497
+ L+ +Y K + ++K F + + D+VS++S+I GY++ A K+ + M
Sbjct: 183 SSLVGLYSKLARMDDSQKAFEEILDKDIVSYTSMITGYSENMDSTSWNAFKIVSDMSWSN 242
Query: 498 VSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMEN 530
+ N VTLV +L ++G + EG +H Y I +
Sbjct: 243 LEVNRVTLVSLLQVAGNLGAIREGKSVHCYSIRRD 277
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 131/268 (48%), Gaps = 6/268 (2%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
R+ F + DLA WN+++ + EA+ L+ ++ R++ D TV L +CI
Sbjct: 97 TRLCFQGFLNNDLAEWNSVMVDIFRAGYPEEAILLYRGLKLRQIDLDEKTVTFGLKSCIE 156
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
L G +H+ +K+G + V ++++ +Y+K + + ++ F+E+ + D VS+ S
Sbjct: 157 LRNLLLGKGMHADSVKLGLSRDKFVGSSLVGLYSKLARMDDSQKAFEEI-LDKDIVSYTS 215
Query: 372 IIAACLQH--NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
+I ++ + + F++ S M S ++ + +T ++ + ++ +HCY +
Sbjct: 216 MITGYSENMDSTSWNAFKIVSDMSWSNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYSIR 275
Query: 430 TGLAF-DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
+ D + L+ +Y++CG+ A + V SW++++ G + G A+
Sbjct: 276 RDIGISDEVLETSLVHMYMQCGACQLASAVLK-NSAQSVASWNAMLAGLVRTGQSGNAIH 334
Query: 489 -LFTRMRSLGVSPNLVTLVGVLTACSHV 515
L+ + V P+ VT V++AC+ +
Sbjct: 335 YLYIMLYEHKVVPDSVTYANVISACAEL 362
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 94/233 (40%), Gaps = 36/233 (15%)
Query: 34 RPSTYAGL--ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+P + A + I A S L+ ++VH + + + D N ++ Y KCG L+ +
Sbjct: 549 KPDSIAVMTAIQAVSEFGHLKGVKQVHCFVYRALLEKDTKTMNSLITAYAKCGRLDLSVS 608
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
F + R++ SW +MI+ + ++++ M + + P TF S++ ACS
Sbjct: 609 LFLSLEHRDLDSWNSMISAYGMHGFYTKVLEMFKLMEEGNINPDGLTFSSVLSACS---- 664
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
HA +IK G H+ ++ +MY+ R +G +
Sbjct: 665 -------HAGLIK--EGLHIF--QSMTSMYS---------------VRPQEEHYGCFVDL 698
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDL 264
S+ G+ E + + + ++ SAC + + ++ S +L
Sbjct: 699 MSRAGHLEEGY----KFIKLSTLNDKSSVLCALLSACRTYGNTMLGQVISNEL 747
>gi|357114751|ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 695
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 164/556 (29%), Positives = 287/556 (51%), Gaps = 50/556 (8%)
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
P+VV L+ K GSL DA FD+MP++N+V+WT+ ++G ++N + A+ + M
Sbjct: 25 PEVVHDCKRLDRLMKSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADM 84
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
+ SGV P F F + + AC+ ++ G Q+H+ +++ ++L+ +Y++ +
Sbjct: 85 VASGVAPNDFAFNAALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDL 144
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLG-YELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
A+ VF + DV + S+++AF + G +EL A+ ++ML G +PNE S+
Sbjct: 145 GAAKGVFDRMESPDVVGYTSLVSAFCRSGEFEL-AVDTLHQMLRQGV-EPNEHTMASILG 202
Query: 247 ACSNF---------------------------------------ARILFNEIDSPDLASW 267
+C F A+ +FN + ++ +W
Sbjct: 203 SCCPFVLGEQVHAYMIKAMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTW 262
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELL-PDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
+++ +A+ +F +M ++ P+ L AC G + L G Q+HS I
Sbjct: 263 CSMMQLHIRDGRPEDALQVFDDMISEGVVEPNEFAFSIALGAC-GSIAL--GRQLHSSAI 319
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
K S++ V NA+L+MY + + V K++ +N D VSW + I+A Q+ +E+
Sbjct: 320 KRNLTSDLRVSNALLSMYGRICHVQELEAVLKDI-ENPDIVSWTTAISANFQNGFSEKAI 378
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
L S + + + P+ F+ + +CA +A L+ Q HC K G + N L+++Y
Sbjct: 379 ALLSMLHSRGLMPNDYAFSSALSSCADLALLDQGRQFHCLALKLGCDLKICTGNALINLY 438
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL-GVSPNLVTL 505
KCG + A+ F+ M++ DV SW+SLI GYAQ G AL++F MRS+ G P+ +
Sbjct: 439 SKCGQIAPAKLAFDVMDHRDVTSWNSLIHGYAQHGDASMALQVFGEMRSIRGTEPDESSF 498
Query: 506 VGVLTACSHVGLVEEGLHLYRIM--ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
+GVL AC+H G+V EG+ L+R + +++G P+ H +CVVD++ R+G +A + +
Sbjct: 499 LGVLAACNHAGMVNEGVALFRAIASHSQHGATPSPSHYACVVDMMGRSGRFDDALRLVEE 558
Query: 564 MACDADIVVWKSLLAS 579
M ++WK+LLAS
Sbjct: 559 MPFRPGALIWKTLLAS 574
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 193/401 (48%), Gaps = 44/401 (10%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
L+ G +VH + + D + + ++ +Y +CG L A+ FD+M +VV +T++++
Sbjct: 109 LRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDRMESPDVVGYTSLVSA 168
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE--HG 168
++ + A+ QML+ GV P + T SI+ +C LG Q+HA++IK+ H
Sbjct: 169 FCRSGEFELAVDTLHQMLRQGVEPNEHTMASILGSCC---PFVLGEQVHAYMIKAMGLHS 225
Query: 169 SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
+ A +ALI Y++ A+ VF+ + K+V +W SM+ + G +AL F++M
Sbjct: 226 QSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHIRDGRPEDALQVFDDM 285
Query: 229 LHHGAYQPNEFIFGSVFSAC-----------------------------SNFARI----- 254
+ G +PNEF F AC S + RI
Sbjct: 286 ISEGVVEPNEFAFSIALGACGSIALGRQLHSSAIKRNLTSDLRVSNALLSMYGRICHVQE 345
Query: 255 ---LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
+ +I++PD+ SW I+ + + +A++L S + R L+P+ S L +C
Sbjct: 346 LEAVLKDIENPDIVSWTTAISANFQNGFSEKAIALLSMLHSRGLMPNDYAFSSALSSCAD 405
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
L QG Q H +K+G D + NA++ +Y+KC + A L F ++ + D SWNS
Sbjct: 406 LALLDQGRQFHCLALKLGCDLKICTGNALINLYSKCGQIAPAKLAF-DVMDHRDVTSWNS 464
Query: 372 IIAACLQHNQAEELFRLFSRMLASQ-IKPDHITFNDVMGAC 411
+I QH A ++F M + + +PD +F V+ AC
Sbjct: 465 LIHGYAQHGDASMALQVFGEMRSIRGTEPDESSFLGVLAAC 505
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 191/427 (44%), Gaps = 59/427 (13%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHIL- 62
VS+ C+ + +A D + P+ T A ++ +C LG +VH +++
Sbjct: 166 VSAFCRSGEFE---LAVDTLHQMLRQGVEPNEHTMASILGSCCPF---VLGEQVHAYMIK 219
Query: 63 -LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ + + +++ Y + + A+ F+ + +NVV+W +M+ ++ + DA+
Sbjct: 220 AMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHIRDGRPEDAL 279
Query: 122 KLYIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+++ M+ GV+ P +F F + AC GS+ LGRQLH+ IK S L NAL++M
Sbjct: 280 QVFDDMISEGVVEPNEFAFSIALGAC---GSIALGRQLHSSAIKRNLTSDLRVSNALLSM 336
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y + + + V I D+ SW + I+A + G+ +A+ + MLH PN++
Sbjct: 337 YGRICHVQELEAVLKDIENPDIVSWTTAISANFQNGFSEKAIALLS-MLHSRGLMPNDYA 395
Query: 241 FGSVFSACSNFA----------------------------------------RILFNEID 260
F S S+C++ A ++ F+ +D
Sbjct: 396 FSSALSSCADLALLDQGRQFHCLALKLGCDLKICTGNALINLYSKCGQIAPAKLAFDVMD 455
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRD-RELLPDGLTVHSLLCACIGRLTLYQGM 319
D+ SWN+LI G A H +A+ A+ +F EMR R PD + +L AC + +G+
Sbjct: 456 HRDVTSWNSLIHGYAQHGDASMALQVFGEMRSIRGTEPDESSFLGVLAACNHAGMVNEGV 515
Query: 320 QVHSYIIKMGFDSNVPVCN---AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+ I P + ++ M + +AL + +E+ ++ W +++A+C
Sbjct: 516 ALFRAIASHSQHGATPSPSHYACVVDMMGRSGRFDDALRLVEEMPFRPGALIWKTLLASC 575
Query: 377 LQHNQAE 383
H E
Sbjct: 576 RLHGNLE 582
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 251/490 (51%), Gaps = 53/490 (10%)
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR- 199
+ +++C+ ++ G++LH H++K+ +A +LI MY+K I + VF+
Sbjct: 34 ATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFPTHH 93
Query: 200 -KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-------- 250
K+V ++ ++IA F AL +N+M H G P++F F V AC +
Sbjct: 94 NKNVFAYNALIAGFLANALPQRALALYNQMRHLGI-APDKFTFPCVIRACGDDDDGFVVT 152
Query: 251 --------------------------------FARILFNEIDSPDLASWNALIAGVASHS 278
A +F E+ D+ WNA++ G A
Sbjct: 153 KIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIG 212
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
EA+ +F M ++P TV +L G VH ++ KMG++S V V N
Sbjct: 213 RFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSN 272
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML-ASQI 397
A++ MY KC + +AL VF E+ D SWNSI++ + RLF RM+ +S++
Sbjct: 273 ALIDMYGKCKCVGDALSVF-EMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRV 331
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF--------DVFVMNGLMDIYIKC 449
+PD +T V+ AC +A+L ++H Y+ GLA DV + N LMD+Y KC
Sbjct: 332 QPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKC 391
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
G++ AR +F M DV SW+ +I GY G G EAL +F+RM + PN ++ VG+L
Sbjct: 392 GNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLL 451
Query: 510 TACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
+ACSH G+V+EGL ME++YG+ P+ EH +CV+D+L RAG + EA D + M AD
Sbjct: 452 SACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKAD 511
Query: 570 IVVWKSLLAS 579
V W+SLLA+
Sbjct: 512 PVGWRSLLAA 521
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 217/487 (44%), Gaps = 57/487 (11%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP---Q 98
+ +C+ +L G+++H H+L + + ++NMY KC SL D + P
Sbjct: 36 LQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKC-SLIDHSLRVFNFPTHHN 94
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+NV ++ A+IAG N A+ LY QM G+ P +FTF +I+AC + ++
Sbjct: 95 KNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKI 154
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H + K + +AL+ Y KF + +A VF + +DV W +M+ F+++G
Sbjct: 155 HGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGRF 214
Query: 219 LEALCHFNEMLHHGAYQPNEFIFG--SVFSACSNF------------------------- 251
EAL F M +G + G S+FS +F
Sbjct: 215 EEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNAL 274
Query: 252 ------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR-DRELLPD 298
A +F +D D+ SWN++++ + + LF M + PD
Sbjct: 275 IDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPD 334
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMG---------FDSNVPVCNAILTMYAKCSV 349
+TV ++L AC L G ++H Y++ G FD +V + NA++ MYAKC
Sbjct: 335 LVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFD-DVLLNNALMDMYAKCGN 393
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ +A +VF + + D SWN +I H E +FSRM +Q+ P+ I+F ++
Sbjct: 394 MRDARMVFVNM-REKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLS 452
Query: 410 ACAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDV 467
AC+ + E + L +K G++ + ++D+ + G L A L M D
Sbjct: 453 ACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADP 512
Query: 468 VSWSSLI 474
V W SL+
Sbjct: 513 VGWRSLL 519
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 194/448 (43%), Gaps = 52/448 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ L AL Y+ + I T+ +I AC + K+H +
Sbjct: 101 NALIAGFLANALPQRALALYN-QMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKIHGLMF 159
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ DV + + ++N Y K + +A F+++P R+VV W AM+ G +Q + +A+
Sbjct: 160 KVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGRFEEALG 219
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ +M +GV+P ++T ++ S +G GR +H V K + S ++ NALI MY
Sbjct: 220 VFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNALIDMYG 279
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + DA +VF + D+ SW S+++ + G L F+ M+ QP+
Sbjct: 280 KCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPDLVTVT 339
Query: 243 SVFSACSNF------------------------------------------------ARI 254
+V AC++ AR+
Sbjct: 340 TVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNMRDARM 399
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+F + D+ASWN +I G H EA+ +FS M +++P+ ++ LL AC
Sbjct: 400 VFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSACSHAGM 459
Query: 315 LYQGMQVHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
+ +G+ S + K G ++ ++ M + L A + + AD V W S++
Sbjct: 460 VKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPVGWRSLL 519
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDH 401
AAC HN + S+++ +++PDH
Sbjct: 520 AACRLHNDTDLAEVAASKVI--ELEPDH 545
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 243/486 (50%), Gaps = 46/486 (9%)
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG 196
F S++KAC + LG+++H V+K + NAL+ MY + + AR VF
Sbjct: 95 FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154
Query: 197 IARKDVTSWGSMIAAFSK---LGYELEALCHFNEML------------------------ 229
+ +DV SW +MI + S+ LE + N M
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 214
Query: 230 --------------HHGAYQPNEFIFGSVFSACSNF--ARILFNEIDSPDLASWNALIAG 273
H G P +++ C + AR LFN + + SW A+IAG
Sbjct: 215 KAMHAYVIRNSNNEHMGV--PTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAG 272
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
+ E LF M++ + P+ +T+ SL+ C L G Q+H+YI++ GF +
Sbjct: 273 CIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVS 332
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
+ + A++ MY KCS + NA +F +N D + W ++++A Q N ++ F LF +M
Sbjct: 333 LALATALVDMYGKCSDIRNARALFDST-QNRDVMIWTAMLSAYAQANCIDQAFNLFDQMR 391
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
S ++P +T ++ CA +L++ +H YI K + D + L+D+Y KCG +
Sbjct: 392 TSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDIN 451
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
+A +LF + D+ W+++I G+A G G+EAL +F M GV PN +T +G+L ACS
Sbjct: 452 AAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACS 511
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
H GLV EG L+ M + +G++P EH C+VDLL RAG + EA + I M + +VW
Sbjct: 512 HAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVW 571
Query: 574 KSLLAS 579
+L+A+
Sbjct: 572 GALVAA 577
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 232/480 (48%), Gaps = 50/480 (10%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++ AC + QLG+++H +L DV + N ++ MYG+C +E AR+ FDKM +R+
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERD 159
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
VVSW+ MI S+N + + A++L +M V P + S++ + ++ +G+ +HA
Sbjct: 160 VVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 219
Query: 161 HVIKSEHGSHL--IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA------- 211
+VI++ + H+ AL+ MY K + AR +F+G+ +K V SW +MIA
Sbjct: 220 YVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRL 279
Query: 212 ------FSKLGYE-----------LEALCHFNEMLHHGAYQPNEFIFGSVFSA------- 247
F ++ E L C F L G Q + +I + FS
Sbjct: 280 EEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGK-QLHAYILRNGFSVSLALATA 338
Query: 248 -------CSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
CS+ AR LF+ + D+ W A+++ A + ++A +LF +MR + P
Sbjct: 339 LVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPT 398
Query: 299 GLTVHSL--LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
+T+ SL LCA G L L G VHSYI K + + + A++ MYAKC + A +
Sbjct: 399 KVTIVSLLSLCAVAGALDL--GKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRL 456
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F E + D WN+II H EE +F+ M +KP+ ITF ++ AC+
Sbjct: 457 FIE-AISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGL 515
Query: 417 LEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
+ +L + T GL + ++D+ + G L A ++ M P+ + W +L+
Sbjct: 516 VTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALV 575
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 214/448 (47%), Gaps = 51/448 (11%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILL 63
+ SL + ++ AL + + +++RPS A +++ + ++++G+ +H +++
Sbjct: 167 IRSLSRNKEFDMAL---ELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIR 223
Query: 64 SKCQP--DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ V +L+MY KCG L AR F+ + Q+ VVSWTAMIAGC ++ + +
Sbjct: 224 NSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGT 283
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
KL+I+M + + P + T S+I C G++ LG+QLHA+++++ L AL+ MY
Sbjct: 284 KLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMY 343
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K I +AR +F +DV W +M++A+++ +A F++M G +P +
Sbjct: 344 GKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGV-RPTKVTI 402
Query: 242 GSVFSACS----------------------------------------NFARILFNEIDS 261
S+ S C+ N A LF E S
Sbjct: 403 VSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAIS 462
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
D+ WNA+I G A H EA+ +F+EM + + P+ +T LL AC + +G ++
Sbjct: 463 RDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKL 522
Query: 322 HSYII-KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
++ G + ++ + + +L A + K + +++ W +++AAC H
Sbjct: 523 FEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHK 582
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVM 408
+L L + L +I+P++ +N +M
Sbjct: 583 NP-QLGELAATQLL-EIEPENCGYNVLM 608
>gi|255558480|ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540484|gb|EEF42051.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 681
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 165/537 (30%), Positives = 264/537 (49%), Gaps = 64/537 (11%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N +++ + K G L+ A+ F++MP+RN V+W +MI G ++N +A+ L+ ++ + +
Sbjct: 108 NVVISGFAKAGELDVAKKLFNEMPRRNGVAWNSMIHGYARNGFAREAVGLFKELNSNPLE 167
Query: 134 PG---QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
F S+I AC+ LG++ G+Q+HA ++ + + ++LI +Y K + A
Sbjct: 168 KSCGDTFVLASVIGACADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTA 227
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
V + D S ++I ++ G +A+ +F SN
Sbjct: 228 NYVLKMMDEVDDFSLSALIMGYANCGRMSDAV--------------------RIFRTKSN 267
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
P WN+LI+G ++ +A +L +EM++ + D T+ +L AC
Sbjct: 268 -----------PCFVVWNSLISGYVNNHEEMKAFALVNEMKNNRVQVDSSTITVILSACS 316
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL---------- 360
Q+H Y+ K+G +V V +A + Y+KC +A +F EL
Sbjct: 317 STGNAQYAKQMHGYVCKVGLIDSVIVASAFIDAYSKCRNPNDACKLFSELKAYDTVLLNS 376
Query: 361 --------GKNADS------------VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
G+ D+ +SWNSII Q+ E +F +M ++ D
Sbjct: 377 MITAYCNCGRIRDAKNIFETMPSKSLISWNSIIVGLAQNAYPLEALDVFGKMNKLDLRMD 436
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
+ V+ ACA ++SLE+ Q+ TGL D V L+D Y KCG + + RKLF+
Sbjct: 437 RFSLASVISACACISSLELGEQVFARAIITGLESDQAVSTSLVDFYCKCGFIENGRKLFD 496
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
M D VSW+S+++GYA G G E L LF M+ G+ P +T GVL+AC H GLVEE
Sbjct: 497 SMIKTDEVSWNSMLMGYATNGYGLETLTLFNEMKQAGLRPTDITFTGVLSACDHCGLVEE 556
Query: 521 GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
G + IM+ +Y I P EH SC+VDL ARAGC+ EA + + M +AD +W S+L
Sbjct: 557 GRKWFNIMKYDYHIDPGIEHYSCMVDLFARAGCLKEALNLVEHMPFEADCSMWSSVL 613
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 190/463 (41%), Gaps = 111/463 (23%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A +I AC+ L +++ G++VH IL+ + D VL + ++N+Y KCG L+ A M +
Sbjct: 177 ASVIGACADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTANYVLKMMDE 236
Query: 99 RN-------------------------------VVSWTAMIAGCSQNYQENDAIKLYIQM 127
+ V W ++I+G N++E A L +M
Sbjct: 237 VDDFSLSALIMGYANCGRMSDAVRIFRTKSNPCFVVWNSLISGYVNNHEEMKAFALVNEM 296
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK---- 183
+ V T I+ ACS G+ +Q+H +V K +I +A I Y+K
Sbjct: 297 KNNRVQVDSSTITVILSACSSTGNAQYAKQMHGYVCKVGLIDSVIVASAFIDAYSKCRNP 356
Query: 184 ------------FD---------------RILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+D RI DA+N+F + K + SW S+I ++
Sbjct: 357 NDACKLFSELKAYDTVLLNSMITAYCNCGRIRDAKNIFETMPSKSLISWNSIIVGLAQNA 416
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------------- 249
Y LEAL F +M + + + F SV SAC+
Sbjct: 417 YPLEALDVFGKM-NKLDLRMDRFSLASVISACACISSLELGEQVFARAIITGLESDQAVS 475
Query: 250 ----NF---------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+F R LF+ + D SWN+++ G A++ E ++LF+EM+ L
Sbjct: 476 TSLVDFYCKCGFIENGRKLFDSMIKTDEVSWNSMLMGYATNGYGLETLTLFNEMKQAGLR 535
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF--DSNVPVCNAILTMYAKCSVLCNAL 354
P +T +L AC + +G + + I+K + D + + ++ ++A+ L AL
Sbjct: 536 PTDITFTGVLSACDHCGLVEEGRKWFN-IMKYDYHIDPGIEHYSCMVDLFARAGCLKEAL 594
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
+ + + AD W+S++ C+ H + + +A QI
Sbjct: 595 NLVEHMPFEADCSMWSSVLRGCVAHGDKD-----LGKKVAQQI 632
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 157/348 (45%), Gaps = 47/348 (13%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI-----------------LLSKCQP-- 68
N +++ ST ++SACSS + Q +++H ++ SKC+
Sbjct: 298 NNRVQVDSSTITVILSACSSTGNAQYAKQMHGYVCKVGLIDSVIVASAFIDAYSKCRNPN 357
Query: 69 ------------DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQ 116
D VL N ++ Y CG + DA+ F+ MP ++++SW ++I G +QN
Sbjct: 358 DACKLFSELKAYDTVLLNSMITAYCNCGRIRDAKNIFETMPSKSLISWNSIIVGLAQNAY 417
Query: 117 ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA 176
+A+ ++ +M + + +F+ S+I AC+ + S+ LG Q+ A I + S +
Sbjct: 418 PLEALDVFGKMNKLDLRMDRFSLASVISACACISSLELGEQVFARAIITGLESDQAVSTS 477
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
L+ Y K I + R +F + + D SW SM+ ++ GY LE L FNEM G +P
Sbjct: 478 LVDFYCKCGFIENGRKLFDSMIKTDEVSWNSMLMGYATNGYGLETLTLFNEMKQAG-LRP 536
Query: 237 NEFIFGSVFSACSN-----FARILFN------EIDSPDLASWNALIAGVASHSNANEAMS 285
+ F V SAC + R FN ID P + ++ ++ A EA++
Sbjct: 537 TDITFTGVLSACDHCGLVEEGRKWFNIMKYDYHID-PGIEHYSCMVDLFARAGCLKEALN 595
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
L M D S+L C+ G +V II++ +S+
Sbjct: 596 LVEHM---PFEADCSMWSSVLRGCVAHGDKDLGKKVAQQIIQLNPESS 640
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 81/147 (55%), Gaps = 2/147 (1%)
Query: 12 QNLYN-EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
QN Y EAL + N ++R+ + A +ISAC+ + SL+LG +V +++ + D
Sbjct: 414 QNAYPLEALDVFG-KMNKLDLRMDRFSLASVISACACISSLELGEQVFARAIITGLESDQ 472
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ +++ Y KCG +E+ R FD M + + VSW +M+ G + N + + L+ +M Q+
Sbjct: 473 AVSTSLVDFYCKCGFIENGRKLFDSMIKTDEVSWNSMLMGYATNGYGLETLTLFNEMKQA 532
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQ 157
G+ P TF ++ AC G V GR+
Sbjct: 533 GLRPTDITFTGVLSACDHCGLVEEGRK 559
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 178/617 (28%), Positives = 281/617 (45%), Gaps = 99/617 (16%)
Query: 30 NIRIRPSTYA---GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
N R+ + Y L+SA S GR++H +L + +QN ++NMY K GS+
Sbjct: 261 NARLHQNHYECELALVSALKYCSSSSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSI 320
Query: 87 EDA-------------------------------RMGFDKMPQRNVVSWTAMIAGCSQNY 115
+DA R FD MP + VS+T MI G QN
Sbjct: 321 KDAQLLFDACPTLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNE 380
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+A++++ M GV+P T ++I ACS G + R +HA IK ++
Sbjct: 381 CFREALEVFKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVST 440
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
L+ Y + +AR +F + ++ SW M+ ++K G
Sbjct: 441 NLMRAYCLCSGVGEARRLFDRMPEVNLVSWNVMLNGYAKAGL------------------ 482
Query: 236 PNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+ AR LF + D+ SW +I G + +EA+ ++ M L
Sbjct: 483 -------------VDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSGL 529
Query: 296 LPDGLTVHSLLCACIGRL-TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ + V +L+ AC GRL + G Q+H ++K GFD + I+ YA C ++ A
Sbjct: 530 ALNEILVVNLVSAC-GRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLAC 588
Query: 355 LVFKELGKN------------------------------ADSVSWNSIIAACLQHNQAEE 384
L F+ K+ D SW+++I+ Q +Q+
Sbjct: 589 LQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRI 648
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
LF +M+AS IKP+ +T V A A + +L+ H YI + + + L+D
Sbjct: 649 ALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRAALID 708
Query: 445 IYIKCGSLGSARKLFNFMENP--DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+Y KCGS+ SA + FN + + V W+++I G A G L +F+ M+ + PN
Sbjct: 709 MYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNP 768
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
+T +GVL+AC H GLVE G ++RIM++ Y + P +H C+VDLL RAG + EAE+ I
Sbjct: 769 ITFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEEMIR 828
Query: 563 QMACDADIVVWKSLLAS 579
M ADIV+W +LLA+
Sbjct: 829 SMPMKADIVIWGTLLAA 845
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 175/386 (45%), Gaps = 77/386 (19%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
++V N +LN Y K G ++ AR F+++P ++V+SW MI G + ++A+ +Y ML
Sbjct: 466 NLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAML 525
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS----------------------- 165
+SG+ + +++ AC L ++ G QLH V+K
Sbjct: 526 RSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMD 585
Query: 166 ------EHGS--HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
E G+ HL + NAL++ + K + AR +F + +DV SW +MI+ +++
Sbjct: 586 LACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQ 645
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------------------- 249
AL F++M+ G +PNE SVFSA +
Sbjct: 646 SRIALELFHKMVASG-IKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRA 704
Query: 250 ------------NFARILFNEIDSP--DLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
N A FN+I ++ WNA+I G+ASH +A+ + +FS+M+ +
Sbjct: 705 ALIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNI 764
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF--DSNVPVCNAILTMYAKCSVLCNA 353
P+ +T +L AC + G ++ I+K + + ++ ++ + + +L A
Sbjct: 765 KPNPITFIGVLSACCHAGLVEPGRRIFR-IMKSAYNVEPDIKHYGCMVDLLGRAGLLEEA 823
Query: 354 LLVFKELGKNADSVSWNSIIAACLQH 379
+ + + AD V W +++AAC H
Sbjct: 824 EEMIRSMPMKADIVIWGTLLAACRTH 849
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 164/579 (28%), Positives = 290/579 (50%), Gaps = 46/579 (7%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+ C+S + L ++ I+ + + + Q +++++ K GS +A F+ + +
Sbjct: 53 LLENCTSKKELY---QILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKL 109
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
V + M+ G ++N DA+ +++M+ V + +++ C + GR++H
Sbjct: 110 DVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHG 169
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+I + S+L A++++Y K +I +A +F + KD+ SW +++A +++ G+
Sbjct: 170 LIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKR 229
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------------------ 250
AL +M G +P+ S+ A ++
Sbjct: 230 ALQLVLQMQEAGQ-KPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALL 288
Query: 251 ----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
AR++F + S + SWN +I G A + + EA + F +M D +P +
Sbjct: 289 DMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRV 348
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
T+ +L AC L +G VH + K+ DSNV V N++++MY+KC + A +F L
Sbjct: 349 TMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL 408
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
K +V+WN++I Q+ +E LF M + IK D T V+ A A +
Sbjct: 409 EKT--NVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQA 466
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
+H + + +VFV L+D+Y KCG++ +ARKLF+ M+ V++W+++I GY
Sbjct: 467 KWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTH 526
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
G G E L LF M+ V PN +T + V++ACSH G VEEGL L++ M+ +Y + PT +H
Sbjct: 527 GVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDH 586
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
S +VDLL RAG + +A +FI +M I V ++L +
Sbjct: 587 YSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGA 625
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 203/428 (47%), Gaps = 43/428 (10%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+R+ YA L+ C L+ GR++H I+ + + ++ + ++++Y KC +++A
Sbjct: 141 VRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAY 200
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F++M +++VSWT ++AG +QN A++L +QM ++G P T SI+ A + +
Sbjct: 201 KMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMK 260
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ +GR +H + +S S + NAL+ MY K AR VF G+ K V SW +MI
Sbjct: 261 ALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMID 320
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------- 254
++ G EA F +ML G P V AC+N +
Sbjct: 321 GCAQNGESEEAFATFLKMLDEGEV-PTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLD 379
Query: 255 ------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+FN ++ ++ +WNA+I G A + EA++LF M
Sbjct: 380 SNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNGCVKEALNLFCMM 438
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ + + D T+ ++ A Q +H ++ D+NV V A++ MYAKC +
Sbjct: 439 QSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAI 498
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
A +F ++ + ++WN++I H +E LF+ M +KP+ ITF V+ A
Sbjct: 499 KTARKLF-DMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISA 557
Query: 411 CAKMASLE 418
C+ +E
Sbjct: 558 CSHSGFVE 565
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 189/404 (46%), Gaps = 58/404 (14%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T ++ A + +++L++GR +H + S + V + N +L+MY KCGS AR+ F M
Sbjct: 248 TLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGM 307
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ VVSW MI GC+QN + +A +++ML G +P + T ++ AC+ LG + G
Sbjct: 308 RSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGW 367
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H + K + S++ N+LI+MY+K R+ A ++F+ + + +VT W +MI +++ G
Sbjct: 368 FVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNVT-WNAMILGYAQNG 426
Query: 217 YELEALCHFNEMLHHG-------------------AYQPNEFIFGSVFSACSN------- 250
EAL F M G + ++I G AC +
Sbjct: 427 CVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVST 486
Query: 251 -------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
AR LF+ + + +WNA+I G +H E + LF+EM+ + P
Sbjct: 487 ALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKP 546
Query: 298 DGLTVHSLLCACIGR------LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ +T S++ AC L L++ MQ Y+ + + +A++ + + L
Sbjct: 547 NDITFLSVISACSHSGFVEEGLLLFKSMQEDYYL-----EPTMDHYSAMVDLLGRAGQLD 601
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRL 388
+A +E+ +++ AC H A++LF+L
Sbjct: 602 DAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKL 645
>gi|413918391|gb|AFW58323.1| hypothetical protein ZEAMMB73_367038 [Zea mays]
Length = 711
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 161/552 (29%), Positives = 279/552 (50%), Gaps = 41/552 (7%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
N+ IR + T A +++ C+ L+ +++H I Q +V+L ++++YGKC SL
Sbjct: 141 NSLGIRPKDVTLASVLACCAECLDLRGAQQLHGLIAKRDFQSNVILGTALVDVYGKCLSL 200
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
D R FD + Q N VSW +I + A+ ++ M+++GV P +T + AC
Sbjct: 201 TDVRRAFDDILQPNDVSWNIIIRRYRLAGMGDMALHMFFMMVRAGVRPLVYTVAHAMLAC 260
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
++ G+ +H+ V++ + H+ A+++++ MY K I A+ +F+ +KDV
Sbjct: 261 RDNCALKEGKCIHSFVLRRGYDHHIHARSSVVDMYAKCGDIDAAQRLFNLAPKKDVVMST 320
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLAS 266
S+++ + G +A +++F+ ++ +L S
Sbjct: 321 SVVSGLAACGRIADA-------------------------------KMVFDGMEQHNLVS 349
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WNA++ G + A+ LF +MR D +T+ S+L AC G L L +G ++H+ +
Sbjct: 350 WNAMLTGYVKSMDLTGALDLFQQMRHETKELDVVTLASVLNACTGLLDLGKGEELHALAL 409
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNA--LLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
K G S NA++ +Y+KC L A LL+F E+G D +WNSII+ +H+ +E+
Sbjct: 410 KCGLFSCPFFRNALVRLYSKCGCLRTAKRLLLF-EMGSERDRYAWNSIISGYERHSMSED 468
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
R + S+ KP TF+ + ACA + L+ Q+H Y+ + D + + L+D
Sbjct: 469 ALHAL-REMQSEAKPSQSTFSSALAACANIFLLKHGKQIHAYMIRNRYDIDDILRSALVD 527
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y KC + ++F + DV+ W+S+I A GD L L MR GV P+ VT
Sbjct: 528 MYSKCRLFDYSTRIFELGSSDDVILWNSMIFACAYHSKGDYGLGLLDEMRKQGVRPDSVT 587
Query: 505 LVGVLTAC---SHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
+G L +C HVGL G + +M +EY I+P EH C+++LL + G + E EDF+
Sbjct: 588 FLGALVSCICEGHVGL---GRSYFTLMIDEYSIVPRIEHYECMIELLGKHGYMVELEDFV 644
Query: 562 NQMACDADIVVW 573
+ M + +W
Sbjct: 645 DHMPFEPTTAMW 656
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 119/243 (48%), Gaps = 7/243 (2%)
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
N + A C L +A +F + + D SWN+II+A + E F LF+ M + I
Sbjct: 87 NRAIECLAACGSLADAREMFDAMPRR-DGGSWNAIISASSRAGHPAEAFSLFADMNSLGI 145
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
+P +T V+ CA+ L QLH I K +V + L+D+Y KC SL R+
Sbjct: 146 RPKDVTLASVLACCAECLDLRGAQQLHGLIAKRDFQSNVILGTALVDVYGKCLSLTDVRR 205
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
F+ + P+ VSW+ +I Y G GD AL +F M GV P + T+ + AC
Sbjct: 206 AFDDILQPNDVSWNIIIRRYRLAGMGDMALHMFFMMVRAGVRPLVYTVAHAMLACRDNCA 265
Query: 518 VEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
++EG +H + + I R S VVD+ A+ G + A+ N +A D+V+ S
Sbjct: 266 LKEGKCIHSFVLRRGYDHHIHAR---SSVVDMYAKCGDIDAAQRLFN-LAPKKDVVMSTS 321
Query: 576 LLA 578
+++
Sbjct: 322 VVS 324
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 112/249 (44%), Gaps = 36/249 (14%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + ++ +AL A + + + ST++ ++AC+++ L+ G+++H +++
Sbjct: 454 NSIISGYERHSMSEDALHA--LREMQSEAKPSQSTFSSALAACANIFLLKHGKQIHAYMI 511
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ D +L++ +++MY KC + + F+ +V+ W +MI C+ + + + +
Sbjct: 512 RNRYDIDDILRSALVDMYSKCRLFDYSTRIFELGSSDDVILWNSMIFACAYHSKGDYGLG 571
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L +M + GV P TF + +C G V LGR +
Sbjct: 572 LLDEMRKQGVRPDSVTFLGALVSCICEGHVGLGR-------------------------S 606
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
F ++D +S + R + + MI K GY +E + + H ++P ++
Sbjct: 607 YFTLMIDE---YSIVPR--IEHYECMIELLGKHGYMVE----LEDFVDHMPFEPTTAMWL 657
Query: 243 SVFSACSNF 251
+F C +
Sbjct: 658 RIFDCCREY 666
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
F+ N ++ CGSL AR++F+ M D SW+++I ++ G EA LF M S
Sbjct: 83 TFLFNRAIECLAACGSLADAREMFDAMPRRDGGSWNAIISASSRAGHPAEAFSLFADMNS 142
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
LG+ P VTL VL C+ E L L R + +G+I R+ S V+
Sbjct: 143 LGIRPKDVTLASVLACCA------ECLDL-RGAQQLHGLIAKRDFQSNVI 185
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/544 (30%), Positives = 258/544 (47%), Gaps = 72/544 (13%)
Query: 106 AMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS 165
++I G S +AI LY++ML GV P +TF ++ C+ + + C G Q+H V+K
Sbjct: 101 SLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKM 160
Query: 166 EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHF 225
+ QN LI Y + + VF G++ ++V SW S+I +++ EA+ F
Sbjct: 161 GLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLF 220
Query: 226 NEMLHHGAYQPNEFIFGSVFSACSNF---------------------------------- 251
EM+ G +P+ V SAC+
Sbjct: 221 FEMVEAG-IRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMK 279
Query: 252 ------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
A+ LF+E +L +N +++ A A EA+++ EM + PD +T+ S
Sbjct: 280 CGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSA 339
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG---- 361
+ A + L+ G H Y+I+ G + + N I+ MY KC A VF +
Sbjct: 340 ISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTV 399
Query: 362 -----------KNAD---------------SVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
+N D +V WN++I+ +Q + E+ LF M
Sbjct: 400 VSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGE 459
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA 455
IK D +T + AC + + E+ +H YI K G+ D+ + L+D++ +CG SA
Sbjct: 460 GIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSA 519
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
++FN M DV +W++ I A G G+ A LF +M GV P++V V VLTACSH
Sbjct: 520 MQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHG 579
Query: 516 GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
G VE+GLH++ +ME ++GI P EH C+VDLL RAG + EA D I M + + VVW S
Sbjct: 580 GQVEQGLHIFSLME-DHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGS 638
Query: 576 LLAS 579
LLA+
Sbjct: 639 LLAA 642
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/512 (23%), Positives = 232/512 (45%), Gaps = 78/512 (15%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++S C+ + + G +VH ++ + DV +QN +++ Y +CG ++ F+ M
Sbjct: 133 TFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGM 192
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+RNVVSWT++I G ++ + +A+ L+ +M+++G+ P T +I AC+ L + +G
Sbjct: 193 SERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGE 252
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++ A++ + + + NAL+ MY K I A+ +F +++ + ++++ +++ G
Sbjct: 253 RVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQG 312
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEI-------------DS-- 261
EAL +EML G +P+ S SA + + + ++ DS
Sbjct: 313 LAREALAILDEMLQQGP-RPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIG 371
Query: 262 ------------PDLA-------------SWNAL-------------------------- 270
P++A SWN+L
Sbjct: 372 NVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAV 431
Query: 271 -----IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC--IGRLTLYQGMQVHS 323
I+G+ S +A+ LF EM+ + D +T+ + AC +G L + VH+
Sbjct: 432 FWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAK--WVHT 489
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
YI K G ++ + A++ M+A+C +A+ VF ++ + D +W + I E
Sbjct: 490 YIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTER-DVSAWTAAIGTMAMEGNGE 548
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
LF++ML +KPD + F V+ AC+ +E + + G++ + ++
Sbjct: 549 GATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMV 608
Query: 444 DIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
D+ + G L A L M P+ V W SL+
Sbjct: 609 DLLGRAGLLREAFDLIKSMPMEPNDVVWGSLL 640
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 150/271 (55%), Gaps = 6/271 (2%)
Query: 250 NFARILFN----EIDSPD-LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
++AR F ++ S D L N+LI G +S EA+ L+ M + P+ T
Sbjct: 77 DYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPF 136
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
+L C +G+QVH ++KMG + +V + N ++ YA+C + + VF+ + +
Sbjct: 137 VLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSER- 195
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
+ VSW S+I + ++ +E LF M+ + I+P +T V+ ACAK+ L+M ++
Sbjct: 196 NVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVC 255
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
YI + GL + ++N L+D+Y+KCG++ +A++LF+ + ++V +++++ YA+ G
Sbjct: 256 AYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAR 315
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
EAL + M G P+ VT++ ++A + +
Sbjct: 316 EALAILDEMLQQGPRPDRVTMLSAISASAQL 346
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 194/459 (42%), Gaps = 103/459 (22%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IRPS T +ISAC+ LR L +G +V +I + + V+ N +++MY KCG+++ A+
Sbjct: 228 IRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAK 287
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+ RN+V + +++ ++ +A+ + +MLQ G P + T S I A + L
Sbjct: 288 RLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLV 347
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ G+ H +VI++ N +I MY K + A VF ++ K V SW S+ A
Sbjct: 348 DLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTA 407
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNAL 270
F + G V SA +FN+I + WN +
Sbjct: 408 GFIR--------------------------NGDVESAWE-----VFNQIPERNAVFWNTM 436
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC--IGRLTLYQGMQVHSYIIKM 328
I+G+ S +A+ LF EM+ + D +T+ + AC +G L + VH+YI K
Sbjct: 437 ISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAK--WVHTYIEKN 494
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKEL---------------------------- 360
G ++ + A++ M+A+C +A+ VF ++
Sbjct: 495 GIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLF 554
Query: 361 ------GKNADSVSWNSIIAACLQHNQAEELFRLFSRM----LASQIK------------ 398
G D V + ++ AC Q E+ +FS M ++ QI+
Sbjct: 555 NQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRA 614
Query: 399 ----------------PDHITFNDVMGACAKMASLEMVT 421
P+ + + ++ AC ++EM T
Sbjct: 615 GLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMAT 653
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 137/273 (50%), Gaps = 9/273 (3%)
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS------VLCNALLVFKELGKNADSV 367
TL Q Q+H I K G D ++ A+ + A +FKE ++ D++
Sbjct: 37 TLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDAL 96
Query: 368 -SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
NS+I E L+ RML + P+H TF V+ C K+A+ Q+H
Sbjct: 97 FMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGS 156
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
+ K GL DVF+ N L+ Y +CG + K+F M +VVSW+SLI GYA+ EA
Sbjct: 157 VVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEA 216
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
+ LF M G+ P+ VT+V V++AC+ + ++ G + + E G+ + + +VD
Sbjct: 217 VSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYI-GELGLKLNKVMVNALVD 275
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + G + A+ ++ D ++V++ ++L++
Sbjct: 276 MYMKCGAIDAAKRLFDE-CVDRNLVLYNTILSN 307
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 122/282 (43%), Gaps = 45/282 (15%)
Query: 1 FSNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDH 60
F N +S L +++L+ +A+ + Q I+ T G+ SAC L + +L + VH +
Sbjct: 432 FWNTMISGLVQKSLFEDAIELFREMQGE-GIKADRVTMMGIASACGYLGAPELAKWVHTY 490
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
I + D+ L +++M+ +CG + A F+KM +R+V +WTA I + A
Sbjct: 491 IEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGA 550
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
L+ QML GV P F ++ ACS G V G LH + +HG
Sbjct: 551 TGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQG--LHIFSLMEDHG------------ 596
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
+ +G M+ + G EA +++ +PN+ +
Sbjct: 597 -----------------ISPQIEHYGCMVDLLGRAGLLREAF----DLIKSMPMEPNDVV 635
Query: 241 FGSVFSAC--------SNFARILFNEIDSPDLASWNALIAGV 274
+GS+ +AC + +A NE+ +P A + L++ +
Sbjct: 636 WGSLLAACRVHKNVEMATYAAERINEL-APQRAGVHVLLSNI 676
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 182/618 (29%), Positives = 308/618 (49%), Gaps = 58/618 (9%)
Query: 17 EALVAYDF----SQNNTNIRIRPS--TYAGLIS-ACSSLR-SLQLGRKVHDHILLSKCQP 68
+A+ AYD + +P+ T+ LI+ ACSS+ L + ++ + S
Sbjct: 256 DAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQ 315
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D+ + + +++ + + G +DA+ F++M RNVVS ++ G + Q A K++ +M
Sbjct: 316 DLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM- 374
Query: 129 QSGVMPGQFTFGSIIKACSGLGSV----CLGRQLHAHVIKSEHGSHLIA-QNALIAMYTK 183
+ V ++ ++ A S + GR++HAHVI++ + +A N L+ MY K
Sbjct: 375 KDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAK 434
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
I DA +VF + KD SW S+I+ + +A F+ M G+ P+ F S
Sbjct: 435 SGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGS-MPSNFTLIS 493
Query: 244 VFSACSNFARILFNE----------------------------------------IDSPD 263
S+C++ I+ E + D
Sbjct: 494 TLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYD 553
Query: 264 LASWNALIAGVA-SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQV 321
SWN++I ++ S ++ ++A+ F +M +T ++L A + L+L++ Q+
Sbjct: 554 QVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSA-VSSLSLHEVSHQI 612
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H+ ++K + + NA+L+ Y KC + +F + + D VSWNS+I+ + +
Sbjct: 613 HALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNEL 672
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+ L M+ + D TF ++ ACA +A+LE ++H + L DV V +
Sbjct: 673 LHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSA 732
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+D+Y KCG + A + F M +V SW+S+I GYA+ G G++ALKLFTRM G P+
Sbjct: 733 LVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPD 792
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
VT VGVL+ACSHVG VEEG ++ M Y + P EH SC+VDLL RAG + E DFI
Sbjct: 793 HVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFI 852
Query: 562 NQMACDADIVVWKSLLAS 579
N M ++++W+++L +
Sbjct: 853 NSMPMKPNVLIWRTVLGA 870
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 168/609 (27%), Positives = 295/609 (48%), Gaps = 59/609 (9%)
Query: 25 SQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCG 84
S NT + T+ LI+ + R++H + ++ L N ++N+Y + G
Sbjct: 61 SHCNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIG 120
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
L A+ FD+M RN+V+W +I+G +QN + ++A + M+++G +P + FGS ++
Sbjct: 121 DLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALR 180
Query: 145 AC--SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK-FDRILDARNVFSGIARKD 201
AC SG LG Q+H + K+ +GS ++ N LI+MY D DAR+VF GI ++
Sbjct: 181 ACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRN 240
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHG---AYQPNEFIFGS-VFSACSN------- 250
SW S+I+ +S+ G + A F+ M G +++PNE+ FGS + +ACS+
Sbjct: 241 SISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCV 300
Query: 251 --------------------------FARI--------LFNEIDSPDLASWNALIAGVAS 276
FAR +F ++ ++ S N L+ G+
Sbjct: 301 LEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVK 360
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-----GMQVHSYIIKMGF- 330
A +F EM+D L+ + +L + ++ + G +VH+++I+ G
Sbjct: 361 QKQGEAAAKVFHEMKD--LVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLN 418
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
D+ V + N ++ MYAK + +A VF EL DSVSWNS+I+ Q+ +E+ F
Sbjct: 419 DNKVAIGNGLVNMYAKSGAIADACSVF-ELMVEKDSVSWNSLISGLDQNECSEDAAESFH 477
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
RM + P + T + +CA + + + Q+HC K GL DV V N L+ +Y + G
Sbjct: 478 RMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETG 537
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCG-DEALKLFTRMRSLGVSPNLVTLVGVL 509
K+F+ M D VSW+S+I + +A+K F +M G + VT + +L
Sbjct: 538 CFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINIL 597
Query: 510 TACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
+A S + L E ++ ++ +Y + + ++ + G ++E E +M+ D
Sbjct: 598 SAVSSLSLHEVSHQIHALVL-KYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRD 656
Query: 570 IVVWKSLLA 578
V W S+++
Sbjct: 657 EVSWNSMIS 665
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 122/500 (24%), Positives = 229/500 (45%), Gaps = 67/500 (13%)
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
TF S+I G R+LH IK +L N LI +Y + + A+ +F +
Sbjct: 73 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 132
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--------- 248
+ +++ +W +I+ +++ G EA F +M+ G + PN + FGS AC
Sbjct: 133 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAG-FIPNHYAFGSALRACQESGPSGCK 191
Query: 249 ----------------------------------SNFARILFNEIDSPDLASWNALIAGV 274
+N AR +F+ I + SWN++I+
Sbjct: 192 LGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVY 251
Query: 275 ASHSNANEAMSLFSEMRDREL----LPDGLTVHSLLCACIGRLTLYQGM----QVHSYII 326
+ +A A LFS M+ L P+ T SL+ + G+ Q+ + +
Sbjct: 252 SRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDF--GLCVLEQMLARVE 309
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
K GF ++ V +A+++ +A+ + +A +F+++G + VS N ++ ++ Q E
Sbjct: 310 KSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVR-NVVSMNGLMVGLVKQKQGEAAA 368
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLE----MVTQLHCYITKTGLAFD-VFVMNG 441
++F M + + ++ ++ A ++ + LE ++H ++ +TGL + V + NG
Sbjct: 369 KVFHEM-KDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNG 427
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+++Y K G++ A +F M D VSW+SLI G Q C ++A + F RMR G P+
Sbjct: 428 LVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPS 487
Query: 502 LVTLVGVLTACSHVG--LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
TL+ L++C+ +G ++ E +H + + G+ + ++ L A GC E
Sbjct: 488 NFTLISTLSSCASLGWIMLGEQIHCDGL---KLGLDTDVSVSNALLALYAETGCFTECLK 544
Query: 560 FINQMACDADIVVWKSLLAS 579
+ M + D V W S++ +
Sbjct: 545 VFSLMP-EYDQVSWNSVIGA 563
>gi|15234184|ref|NP_193657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|2828297|emb|CAA16711.1| putative protein [Arabidopsis thaliana]
gi|7268717|emb|CAB78924.1| putative protein [Arabidopsis thaliana]
gi|332658761|gb|AEE84161.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 932
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 175/601 (29%), Positives = 301/601 (50%), Gaps = 37/601 (6%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
C N + + Y S + T++ +ISACSS+ L LG +H ++ S P+
Sbjct: 264 CLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPE 323
Query: 70 --VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
V + N I++MY KCG E A F+++ R+V+S A++ G + N +A + QM
Sbjct: 324 AHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQM 383
Query: 128 LQ-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH-LIAQNALIAMYTKFD 185
+ P T SI C L GR +H + ++ E S L N++I MY K
Sbjct: 384 QSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCG 443
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
A +F +D+ SW SMI+AFS+ G+ +A F E++ Y ++F +V
Sbjct: 444 LTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE--YSCSKFSLSTVL 501
Query: 246 ---SACSNFARILFNEI----------------------DSPDLASWNALIAGVASHSNA 280
++C + ++F + ++ DL SWN++I+G AS +
Sbjct: 502 AILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHH 561
Query: 281 NEAMSLFSEM-RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
E++ F M R+ ++ D +T+ + A + QG H IK + + + N
Sbjct: 562 LESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNT 621
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
++TMY +C + +A+ VF L + + SWN +I+A Q+ E+F+LF + +++P
Sbjct: 622 LITMYGRCKDIESAVKVFG-LISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEP 677
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
+ ITF ++ A ++ S Q HC++ + G + FV L+D+Y CG L + K+F
Sbjct: 678 NEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVF 737
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNLVTLVGVLTACSHVGLV 518
+ +W+S+I + G G++A++LF + S + PN + + +L+ACSH G +
Sbjct: 738 RNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFI 797
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+EGL Y+ ME ++G+ P EH +VD+L RAG + EA +FI + VW +LL+
Sbjct: 798 DEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLS 857
Query: 579 S 579
+
Sbjct: 858 A 858
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 135/511 (26%), Positives = 221/511 (43%), Gaps = 78/511 (15%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D L N ++N+Y K +L A F M R++VSW ++ C N +++ + M
Sbjct: 222 DSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMT 281
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG--SHLIAQNALIAMYTKFDR 186
SG TF +I ACS + + LG LH VIKS + +H+ N++I+MY+K
Sbjct: 282 GSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGD 341
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
A VF + +DV S +++ F+ G EA N+M QP+ S+ S
Sbjct: 342 TEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITS 401
Query: 247 ACSNF-----------------------------------------ARILFNEIDSPDLA 265
C + A +LF DL
Sbjct: 402 ICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLV 461
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDG--LTVHSLLCACIGRLTLYQGMQVHS 323
SWN++I+ + + ++A +LF E+ TV ++L +C +L G VH
Sbjct: 462 SWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHC 521
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
++ K+G L +A L + + + D SWNS+I+ C
Sbjct: 522 WLQKLG-------------------DLTSAFLRLETMSETRDLTSWNSVISGCASSGHHL 562
Query: 384 ELFRLFSRM-LASQIKPDHITFNDVMGACAKMASLEMVTQLHCY---ITKTGLAFDVFVM 439
E R F M +I+ D IT ++G + +L +V Q C+ K+ D +
Sbjct: 563 ESLRAFQAMSREGKIRHDLIT---LLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQ 619
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
N L+ +Y +C + SA K+F + +P++ SW+ +I +Q G E +LF R+L +
Sbjct: 620 NTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLF---RNLKLE 676
Query: 500 PNLVTLVGVLTACSHVGLVEEGL----HLYR 526
PN +T VG+L+A + +G G+ HL R
Sbjct: 677 PNEITFVGLLSASTQLGSTSYGMQAHCHLIR 707
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 137/518 (26%), Positives = 235/518 (45%), Gaps = 75/518 (14%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
R VH L D+ + +L YG+ G L + FD++ +++V+ W +MI +QN
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ---LHAHVIKSEHGSHL 171
+ A+ L+I+M+ G +F +++ A S L S+ L R+ LH I++
Sbjct: 167 GRYIAAVGLFIEMIHKG---NEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDS 223
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH 231
NAL+ +Y K + + A VF+ + +D+ SW +++ G+ ++L +F M
Sbjct: 224 SLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGS 283
Query: 232 GAYQPNEFIFGSVFSACSNF---------------------------------------- 251
G + + F V SACS+
Sbjct: 284 GQ-EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDT 342
Query: 252 --ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD-RELLPDGLTVHSLLCA 308
A +F E+ D+ S NA++ G A++ EA + ++M+ ++ PD TV S+
Sbjct: 343 EAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSI 402
Query: 309 CIGRLTL-YQGMQVHSYIIKMGFDSN-VPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
C G L+ +G VH Y ++M S + V N+++ MY KC + A L+FK + D
Sbjct: 403 C-GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTT-THRDL 460
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLA--SQIKPDHITFNDVMGACAKMASLEMVTQLH 424
VSWNS+I+A Q+ + LF +++ S K T ++ +C SL +H
Sbjct: 461 VSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVH 520
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
C++ K G F+ +L E D+ SW+S+I G A G
Sbjct: 521 CWLQKLGDLTSAFL------------------RLETMSETRDLTSWNSVISGCASSGHHL 562
Query: 485 EALKLFTRMRSLG-VSPNLVTLVGVLTACSHVGLVEEG 521
E+L+ F M G + +L+TL+G ++A ++GLV +G
Sbjct: 563 ESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQG 600
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 201/456 (44%), Gaps = 68/456 (14%)
Query: 2 SNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
SN ++ ++ EA + Q+ I+ +T + S C L + GR VH +
Sbjct: 360 SNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYT 419
Query: 62 LLSKCQPDVV-LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ + Q + + N +++MYGKCG A + F R++VSW +MI+ SQN + A
Sbjct: 420 VRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKA 479
Query: 121 IKLYIQMLQSGVMPGQFTFGS---IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
L+ +++ S +F+ + I+ +C S+ G+ +H + K L
Sbjct: 480 KNLFKEVV-SEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQK---------LGDL 529
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
+ + + + + + R D+TSW S+I+ + G+ LE+L F M G + +
Sbjct: 530 TSAFLRLETMSETR---------DLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHD 580
Query: 238 EFIFGSVFSACSNFARIL----------------------------------------FN 257
SA N +L F
Sbjct: 581 LITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFG 640
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
I P+L SWN +I+ ++ + E LF R+ +L P+ +T LL A +
Sbjct: 641 LISDPNLCSWNCVISALSQNKAGREVFQLF---RNLKLEPNEITFVGLLSASTQLGSTSY 697
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
GMQ H ++I+ GF +N V A++ MY+ C +L + VF+ G N+ S +WNS+I+A
Sbjct: 698 GMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSIS-AWNSVISAHG 756
Query: 378 QHNQAEELFRLFSRMLA-SQIKPDHITFNDVMGACA 412
H E+ LF + + S+++P+ +F ++ AC+
Sbjct: 757 FHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACS 792
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 3/248 (1%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + E+L A+ IR T G ISA +L + GR H +
Sbjct: 549 NSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAI 608
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S + D LQN ++ MYG+C +E A F + N+ SW +I+ SQN + +
Sbjct: 609 KSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQ 668
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ + + P + TF ++ A + LGS G Q H H+I+ ++ AL+ MY+
Sbjct: 669 LFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYS 725
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
+ VF +++W S+I+A G +A+ F E+ + +PN+ F
Sbjct: 726 SCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFI 785
Query: 243 SVFSACSN 250
S+ SACS+
Sbjct: 786 SLLSACSH 793
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 138/298 (46%), Gaps = 10/298 (3%)
Query: 286 LFSEMRDRE---LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
LF E+ +RE + + + +L + + R VH + +K G ++ + +LT
Sbjct: 71 LFDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLT 130
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
Y + L ++ +F EL K D + WNS+I A Q+ + LF M+ + D
Sbjct: 131 FYGRTGELVSSSCLFDEL-KEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDST 189
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
T A + + + LHC +TGL D + N LM++Y K +L SA +F M
Sbjct: 190 TLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHM 249
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
E+ D+VSW++++ G ++L+ F M G + VT V++ACS + + G
Sbjct: 250 EHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGE 309
Query: 523 HLYRIMENEYGIIPTREHCSC---VVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
L+ ++ G P H S ++ + ++ G AE ++ C D++ ++L
Sbjct: 310 SLHGLVIKS-GYSP-EAHVSVGNSIISMYSKCGDTEAAETVFEELVC-RDVISSNAIL 364
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 185/440 (42%), Gaps = 81/440 (18%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
+NL+ E + Y S + ST ++++C S SL G+ VH
Sbjct: 480 KNLFKEVVSEYSCS------KFSLSTVLAILTSCDSSDSLIFGKSVH-----------CW 522
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQ-RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
LQ K G L A + + M + R++ SW ++I+GC+ + ++++ + M +
Sbjct: 523 LQ--------KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSRE 574
Query: 131 G-VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD 189
G + T I A LG V GR H IKS QN LI MY + I
Sbjct: 575 GKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIES 634
Query: 190 ARNVFSGIARKDVTSWGSMIAAFSK--------------------------------LG- 216
A VF I+ ++ SW +I+A S+ LG
Sbjct: 635 AVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGS 694
Query: 217 --YELEALCHFNEMLHHGAYQPNEFIFGSV---FSACS--NFARILFNEIDSPDLASWNA 269
Y ++A CH ++ G +Q N F+ ++ +S+C +F +++WN+
Sbjct: 695 TSYGMQAHCH---LIRRG-FQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNS 750
Query: 270 LIAGVASHSNANEAMSLFSEMR-DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
+I+ H +AM LF E+ + E+ P+ + SLL AC + +G+ SY +M
Sbjct: 751 VISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGL---SYYKQM 807
Query: 329 GFDSNV-PVCNA---ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
V PV I+ M + L A +G+ + W ++++AC H +
Sbjct: 808 EEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDT-K 866
Query: 385 LFRLFSRMLASQIKPDHITF 404
L + + +L +++PD+ ++
Sbjct: 867 LGKEVAEVLF-EMEPDNASY 885
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 160/542 (29%), Positives = 271/542 (50%), Gaps = 40/542 (7%)
Query: 65 KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
+ +P+V+ N + + + G + DA F MP+R+ ++ AM+AG Y N + L
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAG----YSANGRLPLA 88
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA----------HVIKSEHGSH---- 170
+ ++ P +++ +++ A + S+ R L +V+ S H +H
Sbjct: 89 ASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVS 148
Query: 171 -------------LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
++ N ++A Y + R+ +AR +F+ D SW ++++ + + G
Sbjct: 149 LARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGK 208
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASH 277
EA F+ M N + G AR LF+ D+ +W A+++G A +
Sbjct: 209 MSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQN 268
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
EA +F M +R + ++ ++++ A I R + + + + M NV
Sbjct: 269 GMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKE----LFNMMPCRNVASW 320
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
N +LT YA+ +L A VF + + D+VSW +++AA Q +EE +LF M
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFDTMPQK-DAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGE 379
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
+ F V+ CA +A+LE QLH + + G FV N L+ +Y KCG++ AR
Sbjct: 380 WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARN 439
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
F ME DVVSW+++I GYA+ G G EAL++F MR+ P+ +TLVGVL ACSH GL
Sbjct: 440 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 499
Query: 518 VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
VE+G+ + M +++G+ EH +C++DLL RAG + EA D + M + D +W +LL
Sbjct: 500 VEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL 559
Query: 578 AS 579
+
Sbjct: 560 GA 561
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 161/396 (40%), Gaps = 89/396 (22%)
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
S+ + D + N +++ Y + G + +AR FD+MP R+VVSW M++G ++ +A +L
Sbjct: 187 SRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRL 246
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ + + FT+ +++ + G + R+ V + + ++ NA++A Y +
Sbjct: 247 F----DAAPVRDVFTWTAVVSGYAQNGMLEEARR----VFDAMPERNAVSWNAMVAAYIQ 298
Query: 184 FDRILD--------------------------------ARNVFSGIARKDVTSWGSMIAA 211
R++D A+ VF + +KD SW +M+AA
Sbjct: 299 -RRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAA 357
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
+S+ G E L F EM G + N F V S C++
Sbjct: 358 YSQGGCSEETLQLFIEMGRCGEWV-NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGV 416
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
AR F E++ D+ SWN +IAG A H EA+ +F MR
Sbjct: 417 GCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMR 476
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV----CNAILTMYAKC 347
PD +T+ +L AC + +G+ SY M D V ++ + +
Sbjct: 477 TTSTKPDDITLVGVLAACSHSGLVEKGI---SYFYSMHHDFGVTAKPEHYTCMIDLLGRA 533
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A + K++ DS W +++ A H E
Sbjct: 534 GRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPE 569
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 14/184 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S +A ++S C+ + +L+ G ++H ++ + + N +L MY KCG++EDAR F++
Sbjct: 384 SAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEE 443
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M +R+VVSW MIAG +++ +A++++ M + P T ++ ACS G V G
Sbjct: 444 MEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKG 503
Query: 156 ----RQLHAH---VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGS 207
+H K EH +I + + R+ +A ++ + D T WG+
Sbjct: 504 ISYFYSMHHDFGVTAKPEH------YTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGA 557
Query: 208 MIAA 211
++ A
Sbjct: 558 LLGA 561
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 163/553 (29%), Positives = 273/553 (49%), Gaps = 49/553 (8%)
Query: 74 NHILNMYGKCGS--LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
N +L Y + L AR FD++P+R+ VSW A++A + + +A +L M G
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
+ F GS +++ + +G QL + +KS +++ A +AL+ +Y K R+ DAR
Sbjct: 89 LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV------- 244
VF G+ ++ SW ++IA +++ G AL F EM G P+E F S+
Sbjct: 149 QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREG-LAPDEATFASLLTAVEGP 207
Query: 245 ------------------------------FSACSNF--ARILFNEI-DSPDLASWNALI 271
+S C + +R +F+ I D DL SWNA++
Sbjct: 208 SCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAML 267
Query: 272 AGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGR-LTLYQGMQVHSYIIKMG 329
+ +EAM F M ++ + PD + S++ +C +QG +H +IK
Sbjct: 268 GAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSA 327
Query: 330 FDSNVPVCNAILTMYAKCSVLC---NALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+ PVCNA++ MY + + C +A F L D+VSWNS++ QH + +
Sbjct: 328 LEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLK-DTVSWNSMLTGYSQHGLSADAL 386
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
+ F M + ++ D F+ + + +++A L++ Q+H + +G A + FV + L+ +Y
Sbjct: 387 KFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMY 446
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
K G + ARK F + V W+++I GYAQ G + LF M + +T V
Sbjct: 447 SKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFV 506
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
G++T+CSH GLV+EG + ME +YG+ EH +C VDL RAG + +A+ I+ M
Sbjct: 507 GLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPF 566
Query: 567 DADIVVWKSLLAS 579
+ D +VW +LL +
Sbjct: 567 EPDAMVWMTLLGA 579
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 95/187 (50%), Gaps = 4/187 (2%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
+ N+R ++ + + S L LQLG+++H ++ S + + + ++ MY K G ++
Sbjct: 394 SENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIID 453
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
DAR F++ + + V W AMI G +Q+ Q + L+ +MLQ TF +I +CS
Sbjct: 454 DARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCS 513
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNAL--IAMYTKFDRILDARNVFSGIA-RKDVTS 204
G V G ++ + +++++G L ++ + +Y + ++ A+ + + D
Sbjct: 514 HAGLVDEGSEI-LNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMV 572
Query: 205 WGSMIAA 211
W +++ A
Sbjct: 573 WMTLLGA 579
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 163/553 (29%), Positives = 273/553 (49%), Gaps = 49/553 (8%)
Query: 74 NHILNMYGKCGS--LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
N +L Y + L AR FD++P+R+ VSW A++A + + +A +L M G
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
+ F GS +++ + +G QL + +KS +++ A +AL+ +Y K R+ DAR
Sbjct: 89 LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV------- 244
VF G+ ++ SW ++IA +++ G AL F EM G P+E F S+
Sbjct: 149 QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREG-LAPDEATFASLLTAVEGP 207
Query: 245 ------------------------------FSACSNF--ARILFNEI-DSPDLASWNALI 271
+S C + +R +F+ I D DL SWNA++
Sbjct: 208 SCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAML 267
Query: 272 AGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGR-LTLYQGMQVHSYIIKMG 329
+ +EAM F M ++ + PD + S++ +C +QG +H +IK
Sbjct: 268 GAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSA 327
Query: 330 FDSNVPVCNAILTMYAKCSVLC---NALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+ PVCNA++ MY + + C +A F L D+VSWNS++ QH + +
Sbjct: 328 LEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLK-DTVSWNSMLTGYSQHGLSADAL 386
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
+ F M + ++ D F+ + + +++A L++ Q+H + +G A + FV + L+ +Y
Sbjct: 387 KFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMY 446
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
K G + ARK F + V W+++I GYAQ G + LF M + +T V
Sbjct: 447 SKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFV 506
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
G++T+CSH GLV+EG + ME +YG+ EH +C VDL RAG + +A+ I+ M
Sbjct: 507 GLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPF 566
Query: 567 DADIVVWKSLLAS 579
+ D +VW +LL +
Sbjct: 567 EPDAMVWMTLLGA 579
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 95/187 (50%), Gaps = 4/187 (2%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
+ N+R ++ + + S L LQLG+++H ++ S + + + ++ MY K G ++
Sbjct: 394 SENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIID 453
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
DAR F++ + + V W AMI G +Q+ Q + L+ +MLQ TF +I +CS
Sbjct: 454 DARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCS 513
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNAL--IAMYTKFDRILDARNVFSGIA-RKDVTS 204
G V G ++ + +++++G L ++ + +Y + ++ A+ + + D
Sbjct: 514 HAGLVDEGSEI-LNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMV 572
Query: 205 WGSMIAA 211
W +++ A
Sbjct: 573 WMTLLGA 579
>gi|302795666|ref|XP_002979596.1| hypothetical protein SELMODRAFT_51482 [Selaginella moellendorffii]
gi|300152844|gb|EFJ19485.1| hypothetical protein SELMODRAFT_51482 [Selaginella moellendorffii]
Length = 571
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 255/518 (49%), Gaps = 47/518 (9%)
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
VV WTAMI G +++ + AI+ + +M ++ V+P + T+ +++ A L GR++H
Sbjct: 1 VVIWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLGAIQDLEQ---GRRIHV 57
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+ ++ + + L+ NAL+ MY + DA VF + +DV SW S+IAA ++ G
Sbjct: 58 RIQETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPA 117
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------------------ 250
A+ F M G +PN + + C +
Sbjct: 118 AMGLFRRMQLQGT-RPNRITLLELLAWCDDPGEGAAIHERAFASGLRSDVPVCNAILNMH 176
Query: 251 -------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
A LF + + SW A++A + ++A+ LF +M D + PD +
Sbjct: 177 AKAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSIAFI 236
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
+++ AC T +H II+ G DS+ V NAI+ YA+C L A F E+ +
Sbjct: 237 TVINACSSAAT---ARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFVEIKER 293
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
D VSW ++I+A + + + +LF ML ++ + +T V+ ACA ++++ +
Sbjct: 294 RDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGASAIKEGRWV 353
Query: 424 H-CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGC 482
H C I V L+D+Y KCGSL A ++F +E PDVVSW+S+I AQ G
Sbjct: 354 HDCVIGYQLERSSSMVATALLDMYGKCGSLEVAARIFGELEQPDVVSWTSIIAATAQNGD 413
Query: 483 GDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY--GIIPTREH 540
G A +LF M+ GV P VT V V+ ACSH G+V+ G + ++ GI T EH
Sbjct: 414 GSSAARLFCAMQLEGVRPVDVTFVSVVAACSHAGMVDLGKEFVTRLRKDHREGIELTLEH 473
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
C C+VDLLARAG + EAE I+ M VW + LA
Sbjct: 474 CGCIVDLLARAGRLEEAECVIDSMPFKPTPAVWMAFLA 511
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 220/485 (45%), Gaps = 55/485 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY ++ A ++ L+ GR++H I + D+V+ N ++ MY C SL DA F+ M
Sbjct: 38 TYVAVLGA---IQDLEQGRRIHVRIQETGYDTDLVVANALMKMYAACSSLADATRVFEAM 94
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+VVSWT++IA ++ A+ L+ +M G P + T ++ C G G
Sbjct: 95 DHRDVVSWTSIIAANARAGDFPAAMGLFRRMQLQGTRPNRITLLELLAWCDDPGE---GA 151
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H S S + NA++ M+ K R A +F + ++ SW +M+AA + G
Sbjct: 152 AIHERAFASGLRSDVPVCNAILNMHAKAGRFETASELFERMPVRNAVSWTAMMAAMVRAG 211
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR-------ILFNEIDSPDLASWNA 269
+AL F +M G +P+ F +V +ACS+ A I+ DS D A NA
Sbjct: 212 RHDDALRLFRDMEDDG-VEPDSIAFITVINACSSAATARWIHGCIIRGGCDS-DTAVSNA 269
Query: 270 LIAGVASHSNANEAMSLFSEMRD---------------------------RELLPDG--- 299
+I A + EA F E+++ RE+L +G
Sbjct: 270 IIRAYARCGSLKEAYRTFVEIKERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRA 329
Query: 300 --LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD-SNVPVCNAILTMYAKCSVLCNALLV 356
+T+ +++ AC G + +G VH +I + S+ V A+L MY KC L A +
Sbjct: 330 NEVTLITVVNACAGASAIKEGRWVHDCVIGYQLERSSSMVATALLDMYGKCGSLEVAARI 389
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC--AKM 414
F EL + D VSW SIIAA Q+ RLF M ++P +TF V+ AC A M
Sbjct: 390 FGEL-EQPDVVSWTSIIAATAQNGDGSSAARLFCAMQLEGVRPVDVTFVSVVAACSHAGM 448
Query: 415 ASL--EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWS 471
L E VT+L + G+ + ++D+ + G L A + + M P W
Sbjct: 449 VDLGKEFVTRLR-KDHREGIELTLEHCGCIVDLLARAGRLEEAECVIDSMPFKPTPAVWM 507
Query: 472 SLILG 476
+ + G
Sbjct: 508 AFLAG 512
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 12/215 (5%)
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
V W ++I +H + F+ M + + PD IT+ V+GA + LE ++H
Sbjct: 2 VIWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLGA---IQDLEQGRRIHVR 58
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
I +TG D+ V N LM +Y C SL A ++F M++ DVVSW+S+I A+ G A
Sbjct: 59 IQETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPAA 118
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCV 544
+ LF RM+ G PN +TL+ +L C G EG +H +P C+ +
Sbjct: 119 MGLFRRMQLQGTRPNRITLLELLAWCDDPG---EGAAIHERAFASGLRSDVPV---CNAI 172
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+++ A+AG A + +M + V W +++A+
Sbjct: 173 LNMHAKAGRFETASELFERMPVR-NAVSWTAMMAA 206
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 78/136 (57%), Gaps = 1/136 (0%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQ-PDVVLQNHILNMYGKCGSLED 88
+R T +++AC+ +++ GR VHD ++ + + ++ +L+MYGKCGSLE
Sbjct: 326 GVRANEVTLITVVNACAGASAIKEGRWVHDCVIGYQLERSSSMVATALLDMYGKCGSLEV 385
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A F ++ Q +VVSWT++IA +QN + A +L+ M GV P TF S++ ACS
Sbjct: 386 AARIFGELEQPDVVSWTSIIAATAQNGDGSSAARLFCAMQLEGVRPVDVTFVSVVAACSH 445
Query: 149 LGSVCLGRQLHAHVIK 164
G V LG++ + K
Sbjct: 446 AGMVDLGKEFVTRLRK 461
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 23/122 (18%)
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY- 525
VV W+++I GYA+ G A++ F M V P+ +T V VL A +E+G ++
Sbjct: 1 VVIWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLGAIQD---LEQGRRIHV 57
Query: 526 RIMENEY--------GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
RI E Y ++ CS + D A V EA D D+V W S++
Sbjct: 58 RIQETGYDTDLVVANALMKMYAACSSLAD----ATRVFEAMDH-------RDVVSWTSII 106
Query: 578 AS 579
A+
Sbjct: 107 AA 108
>gi|242035425|ref|XP_002465107.1| hypothetical protein SORBIDRAFT_01g032140 [Sorghum bicolor]
gi|241918961|gb|EER92105.1| hypothetical protein SORBIDRAFT_01g032140 [Sorghum bicolor]
Length = 805
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 158/565 (27%), Positives = 278/565 (49%), Gaps = 46/565 (8%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+ +C+ LR+L LG+ +H L D + + ++ +Y K + D++ F+++ +++
Sbjct: 151 LKSCTELRNLLLGKGMHADSLKLGLNRDKFVGSSLVGLYSKLARMGDSQKAFEEILDKDI 210
Query: 102 VSWTAMIAGCSQNYQEN--DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
VS+T+MI G S+N +A ++ M QS + + T S+++ LG++ G+ +H
Sbjct: 211 VSYTSMITGYSENMDSTSWNAFEIASDMSQSNLEVNRVTLVSLLQVAGNLGAIREGKSVH 270
Query: 160 AHVIKSEHG-SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
+ + G S + +L+ MY + A + + V SW +M+A + G
Sbjct: 271 CYSTRRGIGVSDEVLGTSLVHMYMQCGAYQLASASLKNLV-QSVASWNAMLAGLVRTGQS 329
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------------- 251
A+ HF+ MLH P+ + ++ SAC+
Sbjct: 330 GNAIHHFSVMLHEHKVVPDSVTYANLISACAELCNSGYAASVHAYLIRRSIPLDVVLATA 389
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
++ LF+++ DL S+N +I G + NEA++L EM + P+
Sbjct: 390 LIEVYMKCTRIMSSKHLFDQLVVKDLVSYNTMIYGYLQNGMVNEAIALLKEMVAECVAPN 449
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+T+ SLL A +G +H + I+ GF SNV + N I+ MY+ C + +A +F
Sbjct: 450 FVTILSLLAAIADHKDFVRGRWIHGFSIRHGFFSNVDIANQIIRMYSGCGKITSARTIFA 509
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ-IKPDHITFNDVMGACAKMASL 417
L K + +SW ++ CL E LF ++ KPD +T + A +++ L
Sbjct: 510 SLEKK-NLISWTVMMMGCLFCGHGGETVELFQLLMQQHGNKPDSVTVMTAIQAVSELGHL 568
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
+ V Q+HC++ + L D +N L+ Y KCG L + LF +E+ D+ SW+S+I Y
Sbjct: 569 KGVKQIHCFVYRALLEKDTKTINSLITAYAKCGRLDLSVGLFLSLEHRDLDSWNSMISAY 628
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
G + L++F M ++P+ +T VL+ACSH GL++EGLH+++ M + Y ++P
Sbjct: 629 GMHGFYTKVLEMFKLMEEGNINPDGLTFSSVLSACSHAGLIKEGLHIFQSMTSIYSVLPQ 688
Query: 538 REHCSCVVDLLARAGCVHEAEDFIN 562
EH C+VDLL+RAG + E I
Sbjct: 689 EEHYGCIVDLLSRAGHLEEGYKLIK 713
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 219/478 (45%), Gaps = 71/478 (14%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
++ L C+ +RSL +K+H +L DV+L + IL Y G L R+ F
Sbjct: 49 FSLLFQNCTDVRSL---KKLHARVLTLGLGRDVILGSEILICYASLGVLCKTRLCFHGFL 105
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLY--IQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
++ W ++I + +AI LY +++ Q G+ TFG +K+C+ L ++ LG
Sbjct: 106 NDDLAQWNSVIVDIFRAGYPEEAILLYRGLKLRQIGLDEKTVTFG--LKSCTELRNLLLG 163
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ +HA +K ++L+ +Y+K R+ D++ F I KD+ S+ SMI +S
Sbjct: 164 KGMHADSLKLGLNRDKFVGSSLVGLYSKLARMGDSQKAFEEILDKDIVSYTSMITGYS-- 221
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVA 275
++ D SWNA
Sbjct: 222 --------------------------------------------ENMDSTSWNAF----- 232
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD-SNV 334
+ S+M L + +T+ SLL + +G VH Y + G S+
Sbjct: 233 ---------EIASDMSQSNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYSTRRGIGVSDE 283
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML- 393
+ +++ MY +C A K L ++ SWN+++A ++ Q+ FS ML
Sbjct: 284 VLGTSLVHMYMQCGAYQLASASLKNLVQSV--ASWNAMLAGLVRTGQSGNAIHHFSVMLH 341
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
++ PD +T+ +++ ACA++ + +H Y+ + + DV + L+++Y+KC +
Sbjct: 342 EHKVVPDSVTYANLISACAELCNSGYAASVHAYLIRRSIPLDVVLATALIEVYMKCTRIM 401
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
S++ LF+ + D+VS++++I GY Q G +EA+ L M + V+PN VT++ +L A
Sbjct: 402 SSKHLFDQLVVKDLVSYNTMIYGYLQNGMVNEAIALLKEMVAECVAPNFVTILSLLAA 459
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 206/441 (46%), Gaps = 48/441 (10%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQ-PDVVLQ 73
+N +A D SQ +N+ + T L+ +L +++ G+ VH + D VL
Sbjct: 229 WNAFEIASDMSQ--SNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYSTRRGIGVSDEVLG 286
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSGV 132
+++MY +CG+ + A + Q +V SW AM+AG + Q +AI + ML + V
Sbjct: 287 TSLVHMYMQCGAYQLASASLKNLVQ-SVASWNAMLAGLVRTGQSGNAIHHFSVMLHEHKV 345
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
+P T+ ++I AC+ L + +HA++I+ ++ ALI +Y K RI+ +++
Sbjct: 346 VPDSVTYANLISACAELCNSGYAASVHAYLIRRSIPLDVVLATALIEVYMKCTRIMSSKH 405
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML-------------------HHGA 233
+F + KD+ S+ +MI + + G EA+ EM+ H
Sbjct: 406 LFDQLVVKDLVSYNTMIYGYLQNGMVNEAIALLKEMVAECVAPNFVTILSLLAAIADHKD 465
Query: 234 YQPNEFIFG------------------SVFSACSNF--ARILFNEIDSPDLASWNALIAG 273
+ +I G ++S C AR +F ++ +L SW ++ G
Sbjct: 466 FVRGRWIHGFSIRHGFFSNVDIANQIIRMYSGCGKITSARTIFASLEKKNLISWTVMMMG 525
Query: 274 VASHSNANEAMSLFS-EMRDRELLPDGLTVHSLLCACIGRLTLYQGM-QVHSYIIKMGFD 331
+ E + LF M+ PD +TV + + A + L +G+ Q+H ++ + +
Sbjct: 526 CLFCGHGGETVELFQLLMQQHGNKPDSVTVMTAIQA-VSELGHLKGVKQIHCFVYRALLE 584
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
+ N+++T YAKC L ++ +F L ++ D SWNS+I+A H ++ +F
Sbjct: 585 KDTKTINSLITAYAKCGRLDLSVGLFLSL-EHRDLDSWNSMISAYGMHGFYTKVLEMFKL 643
Query: 392 MLASQIKPDHITFNDVMGACA 412
M I PD +TF+ V+ AC+
Sbjct: 644 MEEGNINPDGLTFSSVLSACS 664
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 148/326 (45%), Gaps = 42/326 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TYA LISAC+ L + VH +++ DVVL ++ +Y KC + ++ FD++
Sbjct: 351 TYANLISACAELCNSGYAASVHAYLIRRSIPLDVVLATALIEVYMKCTRIMSSKHLFDQL 410
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+++VS+ MI G QN N+AI L +M+ V P T S++ A + GR
Sbjct: 411 VVKDLVSYNTMIYGYLQNGMVNEAIALLKEMVAECVAPNFVTILSLLAAIADHKDFVRGR 470
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM-------- 208
+H I+ S++ N +I MY+ +I AR +F+ + +K++ SW M
Sbjct: 471 WIHGFSIRHGFFSNVDIANQIIRMYSGCGKITSARTIFASLEKKNLISWTVMMMGCLFCG 530
Query: 209 ----------------------------IAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
I A S+LG+ L+ + + ++ + +
Sbjct: 531 HGGETVELFQLLMQQHGNKPDSVTVMTAIQAVSELGH-LKGVKQIHCFVYRALLEKDTKT 589
Query: 241 FGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
S+ +A + R+ LF ++ DL SWN++I+ H + + +F M + +
Sbjct: 590 INSLITAYAKCGRLDLSVGLFLSLEHRDLDSWNSMISAYGMHGFYTKVLEMFKLMEEGNI 649
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQV 321
PDGLT S+L AC + +G+ +
Sbjct: 650 NPDGLTFSSVLSACSHAGLIKEGLHI 675
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 5/210 (2%)
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
++H+ ++ +G +V + + IL YA VLC L F N D WNS+I +
Sbjct: 64 KLHARVLTLGLGRDVILGSEILICYASLGVLCKTRLCFHGF-LNDDLAQWNSVIVDIFRA 122
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
EE L+ + QI D T + +C ++ +L + +H K GL D FV
Sbjct: 123 GYPEEAILLYRGLKLRQIGLDEKTVTFGLKSCTELRNLLLGKGMHADSLKLGLNRDKFVG 182
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF--GCGDEALKLFTRMRSLG 497
+ L+ +Y K +G ++K F + + D+VS++S+I GY++ A ++ + M
Sbjct: 183 SSLVGLYSKLARMGDSQKAFEEILDKDIVSYTSMITGYSENMDSTSWNAFEIASDMSQSN 242
Query: 498 VSPNLVTLVGVLTACSHVGLVEEG--LHLY 525
+ N VTLV +L ++G + EG +H Y
Sbjct: 243 LEVNRVTLVSLLQVAGNLGAIREGKSVHCY 272
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 139/270 (51%), Gaps = 10/270 (3%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
R+ F+ + DLA WN++I + EA+ L+ ++ R++ D TV L +C
Sbjct: 97 TRLCFHGFLNDDLAQWNSVIVDIFRAGYPEEAILLYRGLKLRQIGLDEKTVTFGLKSCTE 156
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
L G +H+ +K+G + + V ++++ +Y+K + + ++ F+E+ + D VS+ S
Sbjct: 157 LRNLLLGKGMHADSLKLGLNRDKFVGSSLVGLYSKLARMGDSQKAFEEI-LDKDIVSYTS 215
Query: 372 IIAACLQH--NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
+I ++ + + F + S M S ++ + +T ++ + ++ +HCY T+
Sbjct: 216 MITGYSENMDSTSWNAFEIASDMSQSNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYSTR 275
Query: 430 TGLAF-DVFVMNGLMDIYIKCGS--LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
G+ D + L+ +Y++CG+ L SA L N +++ V SW++++ G + G A
Sbjct: 276 RGIGVSDEVLGTSLVHMYMQCGAYQLASA-SLKNLVQS--VASWNAMLAGLVRTGQSGNA 332
Query: 487 LKLFTRM-RSLGVSPNLVTLVGVLTACSHV 515
+ F+ M V P+ VT +++AC+ +
Sbjct: 333 IHHFSVMLHEHKVVPDSVTYANLISACAEL 362
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/462 (32%), Positives = 237/462 (51%), Gaps = 41/462 (8%)
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G +H +++K G+ NALI+ Y K +RI DA VF + ++D+ SW S+I +
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 215 LGYELEALCHFNEMLHHG---------AYQPN------EFIFGSV--------------- 244
G +A+ F M G + P FI G V
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122
Query: 245 -------FSACSNFARI--LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+S CS++ +F ++ ++ SW A+I + ++ LF EM +
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD + S L A G +L G VH Y I+ G + +PV NA++ MY KC + A
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARF 242
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F + K D++SWN++I + N A E F LF+ ML Q++P+ +T ++ A A ++
Sbjct: 243 IFDHVTKK-DTISWNTLIGGYSRSNLANEAFTLFNEMLL-QLRPNAVTMACILPAAASLS 300
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
SLE ++H Y + G D FV N L+D+Y+KCG+L AR+LF+ + N +++SW+ +I
Sbjct: 301 SLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIA 360
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
GY G G +A+ LF +M+ G+ P+ + +L ACSH GL +EG + M NE+ I
Sbjct: 361 GYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIE 420
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
P +H +C+VDLL G + EA +FI M + D +W SLL
Sbjct: 421 PKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLL 462
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 213/476 (44%), Gaps = 67/476 (14%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ 113
G VH +++ + N +++ Y K +EDA M FD+MPQR+++SW ++I GC+
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 114 NYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA 173
N + A++L+++M G T S++ AC +G +H + +++ S
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122
Query: 174 QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA 233
NAL+ MY+ +F + +K+V SW +MI ++++ G+ + F EM G
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182
Query: 234 YQPNEFIFGSVFSACS----------------------------------------NFAR 253
+P+ F S A + AR
Sbjct: 183 -RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEAR 241
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
+F+ + D SWN LI G + + ANEA +LF+EM +L P+ +T+ +L A
Sbjct: 242 FIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPAAASLS 300
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
+L +G ++H+Y ++ G+ + V NA++ MY KC L A +F L N + +SW +I
Sbjct: 301 SLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDML-TNKNLISWTIMI 359
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
A H + + LF +M S I+PD +F+ ++ AC+ H + G
Sbjct: 360 AGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACS-----------HSGLRDEGWR 408
Query: 434 FDVFVMNG------------LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILG 476
F + N ++D+ G+L A + M PD W SL+ G
Sbjct: 409 FFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRG 464
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 168/329 (51%), Gaps = 8/329 (2%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
A ++F+E+ D+ SWN++I G AS+ ++A+ LF M D T+ S++ AC+
Sbjct: 38 ALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQ 97
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+ G VH Y ++ G S + NA+L MY+ CS + +F+ + + + VSW +
Sbjct: 98 SHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNM-EQKNVVSWTA 156
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+I + + +++ LF M I+PD + A A SL+ +H Y + G
Sbjct: 157 MITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNG 216
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
+ + V N LM++Y+KCG + AR +F+ + D +SW++LI GY++ +EA LF
Sbjct: 217 IEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFN 276
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLA 549
M L + PN VT+ +L A + + +E G +H Y + G + + +VD+
Sbjct: 277 EM-LLQLRPNAVTMACILPAAASLSSLERGREMHAYAVRR---GYLEDNFVANALVDMYV 332
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ G + A + M + +++ W ++A
Sbjct: 333 KCGALLLARRLFD-MLTNKNLISWTIMIA 360
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 136/314 (43%), Gaps = 42/314 (13%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T ++ AC +G VH + + + + L N +L+MY C F
Sbjct: 86 TTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRN 145
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M Q+NVVSWTAMI ++ + L+ +M G+ P F S + A +G S+ G
Sbjct: 146 MEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHG 205
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ +H + I++ L NAL+ MY K + +AR +F + +KD SW ++I +S+
Sbjct: 206 KSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRS 265
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----------------------NF- 251
EA FNEML +PN + A + NF
Sbjct: 266 NLANEAFTLFNEMLLQ--LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFV 323
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR LF+ + + +L SW +IAG H +A++LF +M+ +
Sbjct: 324 ANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGI 383
Query: 296 LPDGLTVHSLLCAC 309
PD + ++L AC
Sbjct: 384 QPDAGSFSAILYAC 397
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 150/311 (48%), Gaps = 21/311 (6%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IRP +A + A + SL+ G+ VH + + + + + + N ++ MY KCG +E+AR
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEAR 241
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD + +++ +SW +I G S++ N+A L+ +ML + P T I+ A + L
Sbjct: 242 FIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLS 300
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
S+ GR++HA+ ++ + NAL+ MY K +L AR +F + K++ SW MIA
Sbjct: 301 SLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIA 360
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNEID- 260
+ G +A+ F +M G QP+ F ++ ACS+ F + NE
Sbjct: 361 GYGMHGRGRDAIALFEQMKGSGI-QPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRI 419
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
P L + ++ + N EA M + PD SLL C +++ ++
Sbjct: 420 EPKLKHYACMVDLLCHTGNLKEAYEFIETM---PIEPDSSIWVSLLRGC----RIHRNVK 472
Query: 321 VHSYIIKMGFD 331
+ + +M F+
Sbjct: 473 LAEKVAEMVFE 483
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 85/150 (56%), Gaps = 6/150 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N + + NL NEA + N +++RP+ T A ++ A +SL SL+ GR++H +
Sbjct: 256 NTLIGGYSRSNLANEAFTLF----NEMLLQLRPNAVTMACILPAAASLSSLERGREMHAY 311
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ D + N +++MY KCG+L AR FD + +N++SWT MIAG + + DA
Sbjct: 312 AVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDA 371
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
I L+ QM SG+ P +F +I+ ACS G
Sbjct: 372 IALFEQMKGSGIQPDAGSFSAILYACSHSG 401
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 247/459 (53%), Gaps = 42/459 (9%)
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
+Q+L P + +++K C ++ G+Q+HAH IK+ L N L+ MY K
Sbjct: 108 VQLLYRIEKPYASIYLTLLKFCLKQRALKEGKQVHAH-IKTSGSIGLYISNRLLDMYAKC 166
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
++DA VF + +D+ SW MI+ + K G
Sbjct: 167 GSLVDAEKVFDEMVHRDLCSWNIMISGYVKGG---------------------------- 198
Query: 245 FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL-LPDGLT 301
NF AR LF+++ + D SW A+I+G H+ EA+ L+ M+ + + T
Sbjct: 199 -----NFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCT 253
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
+ S L A +L+ G ++H +I++MG DS+ V ++L MY KC + A +F ++
Sbjct: 254 ISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKM- 312
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
+ D VSW ++I L++ + EE F LF ++ S I P+ TF V+ ACA +A+ ++
Sbjct: 313 EERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGK 372
Query: 422 QLHCYITKTGLAFDVF--VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
Q+H Y+ + G FD F + L+ +Y KCG + +A+ +F + PD+ SW+SL++GYAQ
Sbjct: 373 QIHAYMVRVG--FDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQ 430
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTRE 539
G D+AL F + G P+ + +GVL+AC+H GLV++GL + ++ ++G+ T +
Sbjct: 431 HGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTID 490
Query: 540 HCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
H +C++DLLARAG EAE IN+M D +W +LL
Sbjct: 491 HYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLG 529
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 168/314 (53%), Gaps = 14/314 (4%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + N EAL Y Q + + T + ++A +++ SL +G+K+H HI+
Sbjct: 222 ISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMG 281
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
D V+ +L+MYGKCGS+E+AR FDKM +R+VVSWT MI +N + + L+
Sbjct: 282 LDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFR 341
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
++ S +MP FTF ++ AC+ L + LG+Q+HA++++ S A +AL+ MY+K
Sbjct: 342 HLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCG 401
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I +A++VF + + D+ SW S++ +++ G +AL HF E+L +P+ F V
Sbjct: 402 DIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKAL-HFFELLLKSGTKPDGIAFIGVL 460
Query: 246 SACSNFARI-----LFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
SAC++ + F+ I + + + +I +A EA S+ +EM +
Sbjct: 461 SACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEM---PI 517
Query: 296 LPDGLTVHSLLCAC 309
PD +LL C
Sbjct: 518 KPDKYIWAALLGGC 531
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/521 (24%), Positives = 219/521 (42%), Gaps = 98/521 (18%)
Query: 5 YVSSLCKQNLYNEALVAYDFSQNNTNIRI---------RP--STYAGLISACSSLRSLQL 53
Y++ LC L+ EA+ D + +R +P S Y L+ C R+L+
Sbjct: 81 YINRLCDSKLFKEAI---DILCGQSRLREAVQLLYRIEKPYASIYLTLLKFCLKQRALKE 137
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL--------------------------- 86
G++VH HI S + + N +L+MY KCGSL
Sbjct: 138 GKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVK 196
Query: 87 ----EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV-MPGQFTFGS 141
E AR FDKMP R+ SWTA+I+GC Q+ + +A++LY M + + T S
Sbjct: 197 GGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISS 256
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
+ A + + S+ +G+++H H+++ S + +L+ MY K I +AR +F + +D
Sbjct: 257 ALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERD 316
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA--------- 252
V SW +MI + K G E F +++ PN+F F V +AC++ A
Sbjct: 317 VVSWTTMIHTYLKNGRREEGFALFRHLMNSNI-MPNDFTFAGVLNACADLAAEDLGKQIH 375
Query: 253 ----RILFNEIDS---------------------------PDLASWNALIAGVASHSNAN 281
R+ F+ S PDL SW +L+ G A H +
Sbjct: 376 AYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHD 435
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAI 340
+A+ F + PDG+ +L AC + +G++ HS K G + I
Sbjct: 436 KALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACI 495
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+ + A+ A + E+ D W +++ C H E R + +I+P+
Sbjct: 496 IDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLF--EIEPE 553
Query: 401 ----HITFNDVM---GACAKMASLEMVTQLHCYITKTGLAF 434
++T ++ G A+ A++ + K G+++
Sbjct: 554 NPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSW 594
>gi|302793011|ref|XP_002978271.1| hypothetical protein SELMODRAFT_465 [Selaginella moellendorffii]
gi|300154292|gb|EFJ20928.1| hypothetical protein SELMODRAFT_465 [Selaginella moellendorffii]
Length = 680
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 182/626 (29%), Positives = 305/626 (48%), Gaps = 65/626 (10%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILL 63
+S+ ++ NEAL+ + S +RPS T+ L+ ACS SL G+K+H +
Sbjct: 34 ISAYVRRGWINEALLLFKKSLLEG---VRPSEGTFIALLHACSRPASLDQGKKLHRLLEE 90
Query: 64 SKCQPDVV--LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ Q + L ++ MYGKCGSL++A +K+ R+V WT MIA S + + A
Sbjct: 91 AGFQESIAPSLATSLIKMYGKCGSLDEAWKVMEKIESRDVELWTVMIASLSHFGKLDRAF 150
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSV-CLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+L +M G P + TF ++++AC +G LH + + S + +L+ M
Sbjct: 151 ELLKRMDLEGDRPSKMTFMAVLRACKDHPEARQVGGVLHGLIRERGLESDVGVGTSLVNM 210
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y ++ A+ VFS I +DV+SW ++AA+S+ + +AL + EM+ G +P+
Sbjct: 211 YARWGDAQQAQEVFSQIEARDVSSWNCLLAAYSRCSRQEQALVLYREMMLEGV-KPDRLT 269
Query: 241 FGSVFSACSNF------ARI----------------------------------LFNEID 260
+V C++ +RI +F +
Sbjct: 270 LNTVIDVCASLKDLEQGSRIHQQIASSGFASDLMLDTALITFYGRCGKLEAALEIFEALP 329
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL--LCACIGRLTLYQG 318
+ D +WN +IA + HS+ AM F M+ + P +T+ ++ LC +G L
Sbjct: 330 ARDNVTWNTMIASLNDHSSPEAAMGFFQRMQQEGMAPSRVTLLTVLGLCGSVGEAKL--- 386
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
VHS + + GF+ + V N ++T Y +C L AL +F+ L + +S SWN+++ A
Sbjct: 387 --VHSCVRESGFEQDSEVKNTLITAYGRCGGLPQALEIFEALPRKIES-SWNAMMGAYAA 443
Query: 379 HNQAEELFRLFSRM--LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
+ LF RM L I+P T + +C +A ++V I ++ + D
Sbjct: 444 QGKPRAALELFHRMVKLEQMIQPSVSTIILALNSCRSLADGKLVIS---SIPESLVEEDG 500
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFM-ENPDVVSWSSLILGYAQFGCGDEALKLFTRM-R 494
FV ++D+ +CGSL A + F+ + +N D V W++++ +A+ G AL LF M
Sbjct: 501 FVQAAMVDMLARCGSLDDASEFFHKLGKNKDTVLWTTMVAAFARHGHSARALGLFEAMLL 560
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI-IPTREHCSCVVDLLARAGC 553
G SP+ VTLV VL+ACSH GL+ GL ++ +++G+ + E CV+DLL RAG
Sbjct: 561 DGGGSPDEVTLVSVLSACSHAGLLHRGLQIFASTASDFGVQWRSLELYGCVIDLLGRAGQ 620
Query: 554 VHEAEDFINQMACDADIVVWKSLLAS 579
+ EAE + V+W +LL +
Sbjct: 621 LQEAEMLVASSDFSGSSVLWITLLGA 646
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 159/554 (28%), Positives = 269/554 (48%), Gaps = 63/554 (11%)
Query: 76 ILNMYGKCGSLEDARMGFDKMP-QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
+L MY +CGS+E AR FD M +RN WT MI+ + N+A+ L+ + L GV P
Sbjct: 1 LLGMYVRCGSVESARKLFDSMAVERNGECWTVMISAYVRRGWINEALLLFKKSLLEGVRP 60
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN---ALIAMYTKFDRILDAR 191
+ TF +++ ACS S+ G++LH +++ IA + +LI MY K + +A
Sbjct: 61 SEGTFIALLHACSRPASLDQGKKLH-RLLEEAGFQESIAPSLATSLIKMYGKCGSLDEAW 119
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF 251
V I +DV W MIA+ S G A M G +P++ F +V AC +
Sbjct: 120 KVMEKIESRDVELWTVMIASLSHFGKLDRAFELLKRMDLEGD-RPSKMTFMAVLRACKDH 178
Query: 252 -----------------------------------------ARILFNEIDSPDLASWNAL 270
A+ +F++I++ D++SWN L
Sbjct: 179 PEARQVGGVLHGLIRERGLESDVGVGTSLVNMYARWGDAQQAQEVFSQIEARDVSSWNCL 238
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
+A + S +A+ L+ EM + PD LT+++++ C L QG ++H I GF
Sbjct: 239 LAAYSRCSRQEQALVLYREMMLEGVKPDRLTLNTVIDVCASLKDLEQGSRIHQQIASSGF 298
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
S++ + A++T Y +C L AL +F+ L D+V+WN++IA+ H+ E F
Sbjct: 299 ASDLMLDTALITFYGRCGKLEAALEIFEALPAR-DNVTWNTMIASLNDHSSPEAAMGFFQ 357
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
RM + P +T V+G C + ++V H + ++G D V N L+ Y +CG
Sbjct: 358 RMQQEGMAPSRVTLLTVLGLCGSVGEAKLV---HSCVRESGFEQDSEVKNTLITAYGRCG 414
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG--VSPNLVTLVGV 508
L A ++F + SW++++ YA G AL+LF RM L + P++ T++
Sbjct: 415 GLPQALEIFEALPRKIESSWNAMMGAYAAQGKPRAALELFHRMVKLEQMIQPSVSTIILA 474
Query: 509 LTACSHVGLVEEGLHLYRIMEN---EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
L +C L + L + I E+ E G + + +VD+LAR G + +A +F +++
Sbjct: 475 LNSCRS--LADGKLVISSIPESLVEEDGFVQ-----AAMVDMLARCGSLDDASEFFHKLG 527
Query: 566 CDADIVVWKSLLAS 579
+ D V+W +++A+
Sbjct: 528 KNKDTVLWTTMVAA 541
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 163/553 (29%), Positives = 273/553 (49%), Gaps = 49/553 (8%)
Query: 74 NHILNMYGKCGS--LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
N +L Y + L AR FD++P+R+ VSW A++A + + +A +L M G
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASGAHPEAWRLLRAMHAQG 88
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
+ F GS +++ + +G QL + +KS +++ A +AL+ +Y K R+ DAR
Sbjct: 89 LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV------- 244
VF G+ ++ SW ++IA +++ G AL F EM G P+E F S+
Sbjct: 149 QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLV-PDEATFASLLTAVEGP 207
Query: 245 ------------------------------FSACSNF--ARILFNEI-DSPDLASWNALI 271
+S C + +R +F+ I D DL SWNA++
Sbjct: 208 SCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAML 267
Query: 272 AGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGR-LTLYQGMQVHSYIIKMG 329
+ +EAM F M ++ + PD + S++ +C +QG +H +IK
Sbjct: 268 GAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSA 327
Query: 330 FDSNVPVCNAILTMYAKCSVLC---NALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+ PVCNA++ MY + + C +A F L D+VSWNS++ QH + +
Sbjct: 328 LEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLK-DTVSWNSMLTGYSQHGLSADAL 386
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
+ F M + ++ D F+ + + +++A L++ Q+H + +G A + FV + L+ +Y
Sbjct: 387 KFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMY 446
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
K G + ARK F + V W+++I GYAQ G + LF M + +T V
Sbjct: 447 SKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFV 506
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
G++T+CSH GLV+EG + ME +YG+ EH +C VDL RAG + +A+ I+ M
Sbjct: 507 GLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPF 566
Query: 567 DADIVVWKSLLAS 579
+ D +VW +LL +
Sbjct: 567 EPDAMVWMTLLGA 579
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 95/187 (50%), Gaps = 4/187 (2%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
+ N+R ++ + + S L LQLG+++H ++ S + + + ++ MY K G ++
Sbjct: 394 SENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIID 453
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
DAR F++ + + V W AMI G +Q+ Q + L+ +MLQ TF +I +CS
Sbjct: 454 DARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCS 513
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNAL--IAMYTKFDRILDARNVFSGIA-RKDVTS 204
G V G ++ + +++++G L ++ + +Y + ++ A+ + + D
Sbjct: 514 HAGLVDEGSEI-LNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMV 572
Query: 205 WGSMIAA 211
W +++ A
Sbjct: 573 WMTLLGA 579
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 178/625 (28%), Positives = 303/625 (48%), Gaps = 69/625 (11%)
Query: 21 AYDFSQNNTNIRIRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
A+ Q ++P+ + A L+ S + L R++H + + D ++ +
Sbjct: 105 AFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWIT 164
Query: 79 MYGKCGSLEDARMGFDK--MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM-PG 135
MY +CG LEDA+ FD+ + +++ W ++IA + + ++L+ +M+ GV+ P
Sbjct: 165 MYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPT 224
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDARNVF 194
+ T+ S++ AC G G +H +IK+ ++L N+L+ Y K + A +F
Sbjct: 225 ELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEATNL--WNSLVTFYGKCGNLQHASQLF 282
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH-HGAYQPNEFIFGSVFSACSNF-- 251
I+RKDV SW +MIAA + G AL F ML QPN F S+ SA S
Sbjct: 283 ERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSA 342
Query: 252 --------------------------------------ARILFNEIDSPDLASWNALIAG 273
AR +F + D+ SWN+++AG
Sbjct: 343 LRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAG 402
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI----GRLTLYQGMQVHSYIIKMG 329
+ +F M + PD ++ + A G + +G ++H YI++
Sbjct: 403 YEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRI 462
Query: 330 FDSNVP--VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
V V NAIL MYAK + + +A +FK + KN DS SWN+++ ++ + E++
Sbjct: 463 TPGGVSLSVSNAILKMYAKFNRIADAEKIFKGM-KNRDSYSWNAMMDGYSRNAKFEDVLM 521
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD-------VFVMN 440
+F +L DH++ + ++ +C ++ SL++ Q H + K D + + N
Sbjct: 522 IFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINN 581
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+ +Y KCGS+ A ++F ME DV SW+++I G A G EAL+LF RM++ G+ P
Sbjct: 582 ALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKP 641
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
N VT + +L AC+H GLV+EG + + M N+YG+ P+ EH +C++DL R+G A+
Sbjct: 642 NQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSL 701
Query: 561 IN------QMACDADIVVWKSLLAS 579
+ + D + +WK LL +
Sbjct: 702 VEFGITLFKPYHDDILNLWKVLLGA 726
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 141/548 (25%), Positives = 254/548 (46%), Gaps = 57/548 (10%)
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
L+ A+ FD P R+V+SW+A+IA S+ A L+ +M+ G+ P F+ S++K
Sbjct: 71 LKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKV 130
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF--SGIARKDVT 203
G + L RQLH I++ G + A I MY++ + DA+ VF + + D+
Sbjct: 131 SCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDIL 190
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------- 250
W S+IAA+ G +E L F +M+ G P E + SV +AC +
Sbjct: 191 LWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGR 250
Query: 251 --------------------------FARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
A LF I D+ SWNA+IA A+
Sbjct: 251 IIKAGLEATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENAL 310
Query: 285 SLFSEMRDRE--LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
LF M E + P+ +T SLL A G L G ++H++I ++ + + + N+++T
Sbjct: 311 GLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLIT 370
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
Y+KC + A +F+ L D +SWNS++A Q+ Q F +F RM+ S I+PD
Sbjct: 371 FYSKCREVGKAREIFERLLLR-DIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSH 429
Query: 403 TFNDVMGACAKMAS----LEMVTQLHCYITK--TGLAFDVFVMNGLMDIYIKCGSLGSAR 456
+ + A ++ +S ++H YI + T + V N ++ +Y K + A
Sbjct: 430 SLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAE 489
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
K+F M+N D SW++++ GY++ ++ L +F + G + V+L +LT+C +
Sbjct: 490 KIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLV 549
Query: 517 LVEEGLHLYRIMENEYG--IIPTREHC----SCVVDLLARAGCVHEAEDFINQMACDADI 570
++ G + ++ + P ++ + ++ + ++ G + +A +M D+
Sbjct: 550 SLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKME-RKDV 608
Query: 571 VVWKSLLA 578
W +++
Sbjct: 609 FSWTAMIT 616
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 186/373 (49%), Gaps = 33/373 (8%)
Query: 227 EMLHHGAYQPNEFIFGSVFSACSNF------------ARILFNEIDSPDLASWNALIAGV 274
E +HG ++FIF SACS F A+ LF+ + D+ SW+ALIA
Sbjct: 41 EFQNHGF--SSQFIFRC--SACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAY 96
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+ N +A LF +M L P+G ++ SLL + Q+H + I+ GF +
Sbjct: 97 SRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDS 156
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNA-DSVSWNSIIAACLQHNQAEELFRLFSRML 393
+ A +TMY++C VL +A VF E A D + WNSIIAA + H E+ RLF +M+
Sbjct: 157 GIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMV 216
Query: 394 A-SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
+ + P +T+ V+ AC + +H I K GL + N L+ Y KCG+L
Sbjct: 217 SVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLE-ATNLWNSLVTFYGKCGNL 275
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL--GVSPNLVTLVGVLT 510
A +LF + DVVSW+++I Q G G+ AL LF RM + V PN VT + +L+
Sbjct: 276 QHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLS 335
Query: 511 ACSHVGLVEEG----LHLYRI-MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
A S + + G H++R+ +E + I + ++ ++ V +A + ++
Sbjct: 336 AVSGLSALRCGREIHAHIFRLSLEVDTSITNS------LITFYSKCREVGKAREIFERLL 389
Query: 566 CDADIVVWKSLLA 578
DI+ W S+LA
Sbjct: 390 L-RDIISWNSMLA 401
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 219/486 (45%), Gaps = 71/486 (14%)
Query: 156 RQLHAHVIKSE-----HG--SHLI----AQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
R LH+H+ + HG S I A + + ++ +R+ A+ +F +DV S
Sbjct: 29 RFLHSHLRNKQLEFQNHGFSSQFIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVIS 88
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV-------------------- 244
W ++IAA+S+ G +A F +M+ G QPN F S+
Sbjct: 89 WSALIAAYSRCGNFAQAFGLFQKMMGEG-LQPNGFSLASLLKVSCSTGEIGLCRQLHGWS 147
Query: 245 ------------------FSACSNF--ARILFNEID--SPDLASWNALIAGVASHSNANE 282
+S C A+ +F+E + D+ WN++IA H E
Sbjct: 148 IRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVE 207
Query: 283 AMSLFSEMRDRELL-PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
+ LF +M ++ P LT S++ AC G VH IIK G ++ + N+++
Sbjct: 208 VLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEA-TNLWNSLV 266
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ--IKP 399
T Y KC L +A +F+ + + D VSWN++IAA Q + E LF RML + ++P
Sbjct: 267 TFYGKCGNLQHASQLFERISRK-DVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQP 325
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
+ +TF ++ A + +++L ++H +I + L D + N L+ Y KC +G AR++F
Sbjct: 326 NRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIF 385
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ D++SW+S++ GY Q +F RM G+ P+ +L + A S
Sbjct: 386 ERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASR---DS 442
Query: 520 EGLHLYRIMENEYGIIPTR--------EHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
GL +R + +G I R + ++ + A+ + +AE M + D
Sbjct: 443 SGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMK-NRDSY 501
Query: 572 VWKSLL 577
W +++
Sbjct: 502 SWNAMM 507
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 112/221 (50%), Gaps = 8/221 (3%)
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
N D +SW+++IAA + + F LF +M+ ++P+ + ++ + + Q
Sbjct: 83 NRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQ 142
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN--FMENPDVVSWSSLILGYAQF 480
LH + +TG D + + +Y +CG L A+++F+ + D++ W+S+I Y
Sbjct: 143 LHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFH 202
Query: 481 GCGDEALKLFTRMRSLG-VSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTR 538
GC E L+LF +M S+G V+P +T V+ AC G + G ++ RI++ G+ T
Sbjct: 203 GCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKA--GLEATN 260
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
S +V + G + A +++ D+V W +++A+
Sbjct: 261 LWNS-LVTFYGKCGNLQHASQLFERIS-RKDVVSWNAMIAA 299
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN---LVTLVGV 508
L A++LF+ N DV+SWS+LI Y++ G +A LF +M G+ PN L +L+ V
Sbjct: 71 LKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKV 130
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
+ +GL + LH + I +G+ + + + +R G + +A+ ++ + A
Sbjct: 131 SCSTGEIGLCRQ-LHGWSI-RTGFGLDSGIR--AAWITMYSRCGVLEDAQRVFDETSLLA 186
Query: 569 -DIVVWKSLLAS 579
DI++W S++A+
Sbjct: 187 LDILLWNSIIAA 198
>gi|357483095|ref|XP_003611834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513169|gb|AES94792.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 985
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 175/586 (29%), Positives = 292/586 (49%), Gaps = 50/586 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLS---KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
L+ C SLQ R++H +L + L N+I++MY +CGSLEDA FDKMP
Sbjct: 285 LLKKCRITTSLQEARQLHALLLTTTNASGSKSAFLYNNIISMYSRCGSLEDAHQVFDKMP 344
Query: 98 QRNVVSWTAMIAGCSQNYQEN--DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
QR VS+ A++A S+ +++ A LY QM G+ P T S+++A S G + +G
Sbjct: 345 QRTHVSYNALLAAYSRVSEQHCVYAFNLYTQMENMGLRPSNMTITSLLQAASLHGDLLIG 404
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
LHA +K + + Q +L+ MY+ + A +VF + +D +W S+I + K
Sbjct: 405 LLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLILGYLKN 464
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
+ + F EM+ G + P + F + SACS
Sbjct: 465 DKIEKGVYLFIEMMWVG-FTPTVYTFCMILSACSRLKDYFSGRLIHARVIVGNVSPDLHL 523
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
A ++F+ ++ DL SWN++I+G + + +AM+LF +++
Sbjct: 524 QNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCF 583
Query: 296 -LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
PD T ++ A G +H +IK GF +V V + +++MY K AL
Sbjct: 584 PKPDDYTYAGIISATGAFPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAAL 643
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
VF + D++ W +I + R FS M + D + V+ CA +
Sbjct: 644 RVFCSI-PGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYL 702
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
A L +HCY K G ++ V L+D+Y K G+L +A +F+ + +PD+ W+S++
Sbjct: 703 AILRQGEIIHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSML 762
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
G++ G D+ALKLF + G+ P+ VT + +L+ACSH LVE+G L+ M + G+
Sbjct: 763 GGFSHHGMVDDALKLFEEIIKQGLVPDQVTFLSLLSACSHSRLVEQGKLLWNYM-SSIGL 821
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMA-CDADIVVWKSLLAS 579
+P +H SC+V LL+RA + EAE+ IN+ + ++ +W++LL++
Sbjct: 822 VPGPKHYSCMVTLLSRAALLEEAEEIINKSPYVEDNVELWRTLLSA 867
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 197/463 (42%), Gaps = 61/463 (13%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
A++ N+ +RPS T L+ A S L +G +H L D+ +Q +LN
Sbjct: 369 AFNLYTQMENMGLRPSNMTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLN 428
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MY C L A F M +R+ V+W ++I G +N + + L+I+M+ G P +T
Sbjct: 429 MYSSCMDLSSAESVFCDMNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTPTVYT 488
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
F I+ ACS L GR +HA VI L QNAL+ MY A +FS +
Sbjct: 489 FCMILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRME 548
Query: 199 RKDVTSWGSMIAAFSK---------LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
+ D+ SW SMI+ + + L +L+ALC +P+++ + + SA
Sbjct: 549 KWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCF---------PKPDDYTYAGIISATG 599
Query: 250 NF----------------------------------------ARILFNEIDSPDLASWNA 269
F A +F I D W
Sbjct: 600 AFPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIPGKDAILWTE 659
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
+I G + ++ A+ FSEM D + +L C L QG +H Y K+G
Sbjct: 660 MITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQGEIIHCYAYKLG 719
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
+D + V +++ MYAK L A LVF ++ + D WNS++ H ++ +LF
Sbjct: 720 YDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVS-HPDLKCWNSMLGGFSHHGMVDDALKLF 778
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
++ + PD +TF ++ AC+ +E L Y++ GL
Sbjct: 779 EEIIKQGLVPDQVTFLSLLSACSHSRLVEQGKLLWNYMSSIGL 821
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 161/527 (30%), Positives = 270/527 (51%), Gaps = 47/527 (8%)
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS----GVMPGQFTFGSIIKACSGLGSVCL 154
RN VSW +MI S N ++ L +M++ MP T +++ C+ + L
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+ +H +K L+ NAL+ MY+K I +A+ +F K+V SW +M+ FS
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 215 LGYELEALCHFNEML--------------------HHGAYQPN-----------EFIFGS 243
G +ML H ++ P+ EF++
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180
Query: 244 V--------FSACSN--FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
+ ++ C + +A+ +F+ I S + SWNALI G A ++ ++ +M+
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 240
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
LLPD TV SLL AC +L G +VH +II+ + ++ V ++L++Y C LC
Sbjct: 241 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 300
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
+F + ++ VSWN++I LQ+ + +F +M+ I+ I+ V GAC+
Sbjct: 301 QALFDAM-EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSL 359
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ SL + + H Y K L D F+ L+D+Y K GS+ + K+FN ++ SW+++
Sbjct: 360 LPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAM 419
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I+GY G EA+KLF M+ G +P+ +T +GVLTAC+H GL+ EGL M++ +G
Sbjct: 420 IMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFG 479
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFI-NQMACDADIVVWKSLLAS 579
+ P +H +CV+D+L RAG + +A + +M+ +AD+ +WKSLL+S
Sbjct: 480 LKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS 526
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 208/484 (42%), Gaps = 47/484 (9%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T ++ C+ R + LG+ VH + + ++VL N +++MY KCG + +A+M F
Sbjct: 43 ATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKM 102
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG--VMPGQFTFGSIIKACSGLGSVC 153
+NVVSW M+ G S + + QML G V + T + + C +
Sbjct: 103 NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLP 162
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
++LH + +K E + + NA +A Y K + A+ VF GI K V SW ++I +
Sbjct: 163 SLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHA 222
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------- 254
+ +L +M G P+ F S+ SACS +
Sbjct: 223 QSNDPRLSLDAHLQMKISGLL-PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 281
Query: 255 ---------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
LF+ ++ L SWN +I G + + A+ +F +M
Sbjct: 282 FVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLY 341
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ G+++ + AC +L G + H+Y +K + + + +++ MYAK + +
Sbjct: 342 GIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQS 401
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
VF L K + SWN++I H A+E +LF M + PD +TF V+ AC
Sbjct: 402 SKVFNGL-KEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNH 460
Query: 414 MASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF--NFMENPDVVSW 470
+ E + L + GL ++ ++D+ + G L A ++ E DV W
Sbjct: 461 SGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIW 520
Query: 471 SSLI 474
SL+
Sbjct: 521 KSLL 524
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 188/414 (45%), Gaps = 49/414 (11%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
+++H + L + + ++ N + Y KCGSL A+ F + + V SW A+I G +Q+
Sbjct: 165 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 224
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
++ ++QM SG++P FT S++ ACS L S+ LG+++H +I++ L
Sbjct: 225 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 284
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG-- 232
+++++Y + + +F + K + SW ++I + + G+ AL F +M+ +G
Sbjct: 285 LSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 344
Query: 233 --------------------------AYQPNEFIFGSVFSACS-----------NFARIL 255
AY + F ACS + +
Sbjct: 345 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 404
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
FN + ASWNA+I G H A EA+ LF EM+ PD LT +L AC +
Sbjct: 405 FNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLI 464
Query: 316 YQGMQVHSYIIKM----GFDSNVPVCNAILTMYAKCSVLCNAL-LVFKELGKNADSVSWN 370
++G++ Y+ +M G N+ ++ M + L AL +V +E+ + AD W
Sbjct: 465 HEGLR---YLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWK 521
Query: 371 SIIAACLQHNQAEELFRLFSRM--LASQIKPDHITFNDVMGACAKMASLEMVTQ 422
S++++C H E ++ +++ L + +++ +++ K + V Q
Sbjct: 522 SLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQ 575
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 152/307 (49%), Gaps = 23/307 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T L+SACS L+SL+LG++VH I+ + + D+ + +L++Y CG L + FD M
Sbjct: 248 TVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM 307
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+++VSW +I G QN + A+ ++ QM+ G+ + + ACS L S+ LGR
Sbjct: 308 EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGR 367
Query: 157 QLHAHVIKSEHGSHLIAQNALIA-----MYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ HA+ +K HL+ +A IA MY K I + VF+G+ K SW +MI
Sbjct: 368 EAHAYALK-----HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 422
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS----- 261
+ G EA+ F EM G + P++ F V +AC++ I +++ S
Sbjct: 423 YGIHGLAKEAIKLFEEMQRTG-HNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLK 481
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
P+L + +I + ++A+ + +E E D SLL +C L G +V
Sbjct: 482 PNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE--ADVGIWKSLLSSCRIHQNLEMGEKV 539
Query: 322 HSYIIKM 328
+ + ++
Sbjct: 540 AAKLFEL 546
>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Cucumis sativus]
Length = 746
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 167/545 (30%), Positives = 269/545 (49%), Gaps = 49/545 (8%)
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
KCG A FDKM + N+V++ ++I+G Q + + L+ + + G+ ++
Sbjct: 13 KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
+ ACS G++ G+ +H ++ GS ++ N+LI MY+K ++ AR +F + D
Sbjct: 73 ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-NF--------- 251
SW S+IA + + G + E L + +H N + GS ACS NF
Sbjct: 133 GVSWNSLIAGYVQNG-KYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTM 191
Query: 252 --------------------------------ARILFNEIDSPDLASWNALIAGVASHSN 279
A +F+++ ++ +NA++AG+
Sbjct: 192 LHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQET 251
Query: 280 -----ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
A +A++LF EM+ + P T SLL ACI QVH+ + K G S+
Sbjct: 252 IEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDE 311
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
+ + ++ +Y+ + +ALL F + N V ++I LQ+ + E LF +L
Sbjct: 312 YIGSILIDLYSVLGSMMDALLCFNSI-HNLTIVPMTAMIFGYLQNGEFESALSLFYELLT 370
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
+ KPD F+ +M +CA M L Q+ + TK G++ N + +Y K G L +
Sbjct: 371 YEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYA 430
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
A F MENPD+VSWS++I AQ G EAL+ F M+S G+ PN +GVL ACSH
Sbjct: 431 ANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSH 490
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
GLVEEGL + ME +Y + +HC CVVDLL RAG + +AE I ++ + + V+W+
Sbjct: 491 RGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWR 550
Query: 575 SLLAS 579
+LL++
Sbjct: 551 ALLSA 555
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 213/465 (45%), Gaps = 54/465 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + + ++ ++ +D ++ +++ AG ++ACS +L G+ +H IL
Sbjct: 36 NSLISGYVQMSNLDKVMILFDKARR-LGLKLDKYNCAGALTACSQSGNLSAGKMIHGLIL 94
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ VVL N +++MY KCG ++ AR+ FD + + VSW ++IAG QN + + +
Sbjct: 95 VYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLT 154
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVC--LGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ +M Q+G+ +T GS +KACS + C G LH H IK ++ AL+ M
Sbjct: 155 ILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDM 214
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAF-------SKLGYELEALCHFNEMLHHGA 233
Y K + DA +F + K+V + +M+A K Y +AL F EM G
Sbjct: 215 YAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAY--KALNLFFEMKSCGI 272
Query: 234 YQPNEFIFGSVFSAC-----SNFAR----------------------------------- 253
+P+ F + S+ AC FA+
Sbjct: 273 -KPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDAL 331
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
+ FN I + + A+I G + A+SLF E+ E PD +++ +C
Sbjct: 332 LCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMG 391
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
L G Q+ + K+G N+ + MYAK L A L F+++ +N D VSW+++I
Sbjct: 392 MLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQM-ENPDIVSWSTMI 450
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ QH A E R F M + I+P+H F V+ AC+ +E
Sbjct: 451 CSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVE 495
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 195/445 (43%), Gaps = 52/445 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRS--LQLGRKVHDH 60
N ++ + Y E L N + T + ACSS + G +HDH
Sbjct: 137 NSLIAGYVQNGKYEELLTILQKMHQN-GLAFNTYTLGSALKACSSNFNGCKMFGTMLHDH 195
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND- 119
+ DVV+ +L+MY K GSL+DA FD+M +NVV + AM+AG Q D
Sbjct: 196 AIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDK 255
Query: 120 ----AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
A+ L+ +M G+ P FT+ S++KAC + +Q+HA + K+ S +
Sbjct: 256 CAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGS 315
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
LI +Y+ ++DA F+ I + +MI + + G AL F E+L + +
Sbjct: 316 ILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEE-K 374
Query: 236 PNEFIFGSVFSACSNF----------------------------------------ARIL 255
P+EFIF ++ S+C+N A +
Sbjct: 375 PDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLT 434
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F ++++PD+ SW+ +I A H +A EA+ F M+ + P+ +L AC R +
Sbjct: 435 FQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLV 494
Query: 316 YQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
+G++ + K +V C ++ + + L +A + LG + V W ++++
Sbjct: 495 EEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLS 554
Query: 375 ACLQHNQAEELFRLFSRMLASQIKP 399
AC H R+ +++ +++P
Sbjct: 555 ACRIHKDTVTAQRVAQKVI--ELEP 577
>gi|28564593|dbj|BAC57760.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50509708|dbj|BAD31746.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 703
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/480 (31%), Positives = 258/480 (53%), Gaps = 32/480 (6%)
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
+ + +I+ C ++ A+ Y +M ++GV+P FT+ S+++AC+ + LGR +H H
Sbjct: 139 LPYNVLISSCLRHGLPLQALAAYQEMGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMH 198
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
+ +L QNAL++MY K + AR VF G+ ++DV SW SMI++++ +G EA
Sbjct: 199 AAGAGMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEA 258
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNAN 281
+ F M G E++S +WN + G +
Sbjct: 259 MELFRRMRDEG------------------------TEVNS---VTWNTIAGGYIQMRDYR 291
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCAC--IGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
A+ L EM D +T+ L AC +G L L G ++H ++M D V NA
Sbjct: 292 AAVGLIREMVRGGAEVDYVTLVIGLNACSRVGWLRL--GKEIHGLAVRMCCDQVESVSNA 349
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
++TMYA+C + A ++F+ L + V+WN+++++ + AEE +F M+ +KP
Sbjct: 350 LITMYARCKDMECARMLFRML-ECPGVVTWNTMLSSFALSDCAEEASSIFREMICRGVKP 408
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
+++T + CA++A+L+ +LH +I K G + N L+D+Y K G L A+ +F
Sbjct: 409 NYVTVVTYLALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVF 468
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ M++ D++S++S+I GY G G AL+LF +M G+ P+ + +V VL+ACSH GLV
Sbjct: 469 DTMDDCDMISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVL 528
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EG L+ M YGI P EH SC++DL ARAG + +AE+ ++ +W +L+ +
Sbjct: 529 EGEELFNKMVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGA 588
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 188/459 (40%), Gaps = 82/459 (17%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N +SS + L +AL AY N + P TY ++ AC+ R L LGR VH H
Sbjct: 142 NVLISSCLRHGLPLQALAAYQEMGKNG---VLPDVFTYPSVLRACAEARELVLGRAVHMH 198
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ ++ QN +++MY KCG L AR FD M QR+VVSW +MI+ + Q +A
Sbjct: 199 AAGAGMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEA 258
Query: 121 IKLYIQMLQSGVMPGQFTFGSI-----------------------------------IKA 145
++L+ +M G T+ +I + A
Sbjct: 259 MELFRRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDYVTLVIGLNA 318
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
CS +G + LG+++H ++ NALI MY + + AR +F + V +W
Sbjct: 319 CSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRMLECPGVVTW 378
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------- 254
+M+++F+ EA F EM+ G +PN + + C+ A +
Sbjct: 379 NTMLSSFALSDCAEEASSIFREMICRGV-KPNYVTVVTYLALCARVANLQHGQELHGHIV 437
Query: 255 -----------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMS 285
+F+ +D D+ S+ ++IAG A+
Sbjct: 438 KHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTVALR 497
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMY 344
LF +M D + PD + + ++L AC + +G ++ + +I G + + ++ +Y
Sbjct: 498 LFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIKPQMEHYSCMIDLY 557
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
A+ +L A + S W +++ AC E
Sbjct: 558 ARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIE 596
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 10/224 (4%)
Query: 287 FSEMRDRELLPDGLTVHSLLCACIG-----RLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
FS +R R L P T H LL R L G+Q+H+ + +G + + +L
Sbjct: 57 FSRLR-RHLPPAAGTSHLLLRPVAALLHHHRSHLRLGVQLHALSLSLGLSRHPILLPRLL 115
Query: 342 TMY-AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
++Y + S+L +A V + + + +N +I++CL+H + + M + + PD
Sbjct: 116 SVYTSHPSLLPSAASVAAD---STLPLPYNVLISSCLRHGLPLQALAAYQEMGKNGVLPD 172
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T+ V+ ACA+ L + +H + G+ ++F N LM +Y KCG L SARK+F+
Sbjct: 173 VFTYPSVLRACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYAKCGDLASARKVFD 232
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
M DVVSW+S+I YA G EA++LF RMR G N VT
Sbjct: 233 GMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEVNSVT 276
>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
Length = 2090
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 164/531 (30%), Positives = 263/531 (49%), Gaps = 42/531 (7%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N +L+ Y K G+L+ A FD M R+ VSW MI G + + + Q
Sbjct: 74 NSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFE 133
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P T I AC LG++ G ++H ++I+S QN+L++MY D + A +
Sbjct: 134 PNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYADND-MERAEEL 192
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR 253
F + +DV SW MI + + G AL F EM + + + + SV AC+N
Sbjct: 193 FDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGD 252
Query: 254 I----------------------------------------LFNEIDSPDLASWNALIAG 273
I FNE+ + SWN++I+G
Sbjct: 253 ISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISG 312
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
+ +EA+SLF M D +T+ +LL +C + +Q +HS +I+ G++ N
Sbjct: 313 LVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELN 372
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
V N+++ Y+KC ++ A +F L K D+VSW+++IA + +E LF M
Sbjct: 373 EFVINSLIDAYSKCDLIELAWKLFDRL-KTKDTVSWSAMIAGFNHCGKPDEAIALFQEMN 431
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLG 453
+Q KP+ +T ++ A + A L+ H + GLA +V V ++D+Y KCG +G
Sbjct: 432 QAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIG 491
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
+RK F+ + ++VSW ++I G +AL L + M+ G+ PN+VT + VL+ACS
Sbjct: 492 LSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACS 551
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
H GLVEEGL + M ++G+ P EH SC+VD+L+RAG ++ A + I +M
Sbjct: 552 HGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKM 602
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 218/479 (45%), Gaps = 65/479 (13%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
ST I AC SL +++ G K+H +I+ S +QN +L+MY +E A FD+
Sbjct: 137 STLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDE 195
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP-GQFTFGSIIKACSGLGSVCL 154
M +R+V+SW+ MI G Q + A++L+++M + + T S++KAC+ G + +
Sbjct: 196 MCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISM 255
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
GR +H VI L N++I MY+K D A F+ + ++ SW S+I+ +
Sbjct: 256 GRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVR 315
Query: 215 LGYELEALCHFNEMLHHG----------------------------------AYQPNEFI 240
EAL F M G Y+ NEF+
Sbjct: 316 TEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFV 375
Query: 241 FGSVFSACSN-----FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
S+ A S A LF+ + + D SW+A+IAG +EA++LF EM +
Sbjct: 376 INSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQE 435
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+G+T+ SLL A L + H I+ G + V V AIL MYAKC + +
Sbjct: 436 KPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRK 495
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
F ++ + + VSW ++IAAC + A + L S M +KP+ +T V+ AC+
Sbjct: 496 AFDQIPEK-NIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACS--- 551
Query: 416 SLEMVTQLHCYITKTGLAF------DVFVMNGL------MDIYIKCGSLGSARKLFNFM 462
H + + GL+F D V GL +D+ + G L SA L M
Sbjct: 552 --------HGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKM 602
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 182/393 (46%), Gaps = 44/393 (11%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
+N +I + T ++ AC++ + +GR VH ++ D+ + N I++MY KC
Sbjct: 229 SNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDH 288
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
E A F++MP RN VSW ++I+G + + ++A+ L+ M ++G + T +++++C
Sbjct: 289 ESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSC 348
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
+ +H+ VI+ + + N+LI Y+K D I A +F + KD SW
Sbjct: 349 KYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWS 408
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS----------------- 249
+MIA F+ G EA+ F EM + +PN S+ A S
Sbjct: 409 AMIAGFNHCGKPDEAIALFQEM-NQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIR 467
Query: 250 -----------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
+R F++I ++ SW A+IA + A +A++L
Sbjct: 468 RGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALAL 527
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYA 345
SEM+ L P+ +T S+L AC + +G+ +++ G + + + ++ M +
Sbjct: 528 LSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLS 587
Query: 346 KCSVLCNAL-LVFKELGKNADSVS-WNSIIAAC 376
+ L +A+ L+ K + D W ++++AC
Sbjct: 588 RAGKLNSAMNLIEKMPERMRDGAGLWGALLSAC 620
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 155/321 (48%), Gaps = 28/321 (8%)
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------ARI 254
EA +++M GA + + S+ ACS+ A
Sbjct: 32 EACSRYHQMKKAGAQLTDPTLVHSILKACSSLPGFDSLTSTGNSVLDFYMKTGALDSALF 91
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+F+ + S D SWN +I G S +++ + F + R P+ T+ + AC
Sbjct: 92 VFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGA 151
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
+ +G+++H YII+ GF V N++L+MYA + + A +F E+ + D +SW+ +I
Sbjct: 152 MEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCER-DVISWSVMIG 209
Query: 375 ACLQHNQAEELFRLFSRMLA-SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
+Q +A+ +LF M + + I+ D IT V+ ACA + M +H + GL
Sbjct: 210 GYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLD 269
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
+D+FV N ++D+Y KC SA K FN M + VSW+S+I G + EAL LF M
Sbjct: 270 YDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSM 329
Query: 494 RSLGVSPNLVTLVGVLTACSH 514
G + VTLV +L +C +
Sbjct: 330 GKAGFRADEVTLVNLLQSCKY 350
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 150/318 (47%), Gaps = 15/318 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S L + ++EAL + +S R T L+ +C + +H ++
Sbjct: 307 NSIISGLVRTEKHSEALSLF-YSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVI 365
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + + N +++ Y KC +E A FD++ ++ VSW+AMIAG + + ++AI
Sbjct: 366 RWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIA 425
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ +M Q+ P T S+++A S + + H I+ + + A++ MY
Sbjct: 426 LFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYA 485
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I +R F I K++ SWG+MIAA G +AL +EM HG +PN
Sbjct: 486 KCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHG-LKPNVVTTL 544
Query: 243 SVFSACSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
SV SACS+ F ++ + P L ++ ++ ++ N AM+L +M +
Sbjct: 545 SVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPE 604
Query: 293 RELLPDGLTVH-SLLCAC 309
R + DG + +LL AC
Sbjct: 605 R--MRDGAGLWGALLSAC 620
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 107/218 (49%), Gaps = 29/218 (13%)
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
K++ + W AC +++Q ++ A D + ++ AC+ + +
Sbjct: 20 KDSTNRKWWDSWEACSRYHQMKK---------AGAQLTDPTLVHSILKACSSLPGFDS-- 68
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
+T TG N ++D Y+K G+L SA +F+ M + D VSW+ +I G+ G
Sbjct: 69 -----LTSTG--------NSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRG 115
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREH 540
D+ L F + R + PN+ TLV + AC +G +EEGL ++ I+ + + IP+ ++
Sbjct: 116 ASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQN 175
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++ + A + AE+ ++M C+ D++ W ++
Sbjct: 176 --SLLSMYADND-MERAEELFDEM-CERDVISWSVMIG 209
>gi|297816220|ref|XP_002875993.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321831|gb|EFH52252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 731
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 173/558 (31%), Positives = 283/558 (50%), Gaps = 52/558 (9%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVS-WTAMIAGCSQNYQENDAIKLYI 125
+PDV +L+ K G +E A FDKMP+R+ V+ W AMI GC ++ +I+L+
Sbjct: 114 EPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAVWNAMITGCKESGYHGTSIELFR 173
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + GV +F F +++ C GS+ G+Q+H+ VIK+ NALI MY
Sbjct: 174 EMHKLGVRHDKFGFATVLSMCY-YGSLDFGKQVHSLVIKAGFFVASSVVNALITMYFNCQ 232
Query: 186 RILDARNVF--SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
++DAR VF + +A +D ++ +I + E E+L F +M+ G +P + F S
Sbjct: 233 VVVDARLVFEEADVAVRDQVTFNVVIDGLAGFKRE-ESLLVFRQMVEAG-LRPTDLTFVS 290
Query: 244 VFSACS-------------------------------------NFARILFNEIDSPDLAS 266
V S+CS A +F ++ DL +
Sbjct: 291 VMSSCSCETMGHQVHGLSIKTGYEEYTLVSNSTMTMYSSFEDFGAAHKVFESLEEKDLIT 350
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WN +I+G + A+ L+ M + PD T SLL + L L V + +I
Sbjct: 351 WNTMISGYNQANLGQSALLLYKRMHGIGVKPDEFTFGSLLASS---LDLDALEMVQACVI 407
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
K G S + + NA+++ Y+K + A L+F+ K + +SWN+II+ + + E
Sbjct: 408 KFGLSSKIEISNALISAYSKHGKITKADLIFESSPKK-NLISWNAIISGFYHNGFSFEGL 466
Query: 387 RLFSRMLASQ--IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
FS +L ++ I PD T + ++ C ++SL + Q H Y + G + + N ++
Sbjct: 467 ERFSCLLEAEVLIIPDAYTLSILLSICVDISSLMLGEQTHAYALRHGQFKETLIGNAFIN 526
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNLV 503
+Y +CG+L + +F+ M + D VSW+SLI YA+ G G+ A+ + M+ G V P+
Sbjct: 527 MYSQCGTLQKSLAVFHQMSDKDTVSWNSLISAYARHGKGESAVLTYKTMQDEGKVDPDAA 586
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF--I 561
TL VL+AC H GLV+EGL ++ M +G+IP +H SC+VDLL RAG + EAE I
Sbjct: 587 TLSAVLSACGHAGLVKEGLEIFNSMVEFHGLIPNVDHFSCLVDLLGRAGHLDEAESLVKI 646
Query: 562 NQMACDADIVVWKSLLAS 579
++ + + VW +L ++
Sbjct: 647 SEKTIGSRVDVWWALFSA 664
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 218/474 (45%), Gaps = 44/474 (9%)
Query: 108 IAGCSQNYQENDAIKLYIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE 166
+ +++ + +A+KL+ + + + P Q++ I A L G Q+H + I+S
Sbjct: 22 LTALTRSGENRNALKLFADVHRCITLRPDQYSVSLAITAAGHLRDTIFGGQVHCYAIRSG 81
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
H N L+++Y + + + F I DV SW ++++A KLG A F+
Sbjct: 82 LLCHSHVSNTLLSLYARLGNLASLKRKFEEIIEPDVYSWTTLLSASFKLGDIEYAFEVFD 141
Query: 227 EMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
+M P + D+A WNA+I G ++ L
Sbjct: 142 KM-------P-----------------------ERDDVAVWNAMITGCKESGYHGTSIEL 171
Query: 287 FSEMRDRELLPDGLTVHSLLCAC-IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
F EM + D ++L C G L G QVHS +IK GF V NA++TMY
Sbjct: 172 FREMHKLGVRHDKFGFATVLSMCYYGSLDF--GKQVHSLVIKAGFFVASSVVNALITMYF 229
Query: 346 KCSVLCNALLVFKELGKNA-DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
C V+ +A LVF+E D V++N +I + E L +F +M+ + ++P +TF
Sbjct: 230 NCQVVVDARLVFEEADVAVRDQVTFNVVIDGLAGFKREESLL-VFRQMVEAGLRPTDLTF 288
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
VM +C + M Q+H KTG V N M +Y G+A K+F +E
Sbjct: 289 VSVMSSC---SCETMGHQVHGLSIKTGYEEYTLVSNSTMTMYSSFEDFGAAHKVFESLEE 345
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
D+++W+++I GY Q G AL L+ RM +GV P+ T G L A S L + L +
Sbjct: 346 KDLITWNTMISGYNQANLGQSALLLYKRMHGIGVKPDEFTF-GSLLASS---LDLDALEM 401
Query: 525 YRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++G+ E + ++ ++ G + +A D I + + +++ W ++++
Sbjct: 402 VQACVIKFGLSSKIEISNALISAYSKHGKITKA-DLIFESSPKKNLISWNAIIS 454
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 129/295 (43%), Gaps = 52/295 (17%)
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGRL--TLYQ 317
S L + N + + A+ LF+++ R L PD +V SL G L T++
Sbjct: 12 STTLLNLNRRLTALTRSGENRNALKLFADVHRCITLRPDQYSV-SLAITAAGHLRDTIFG 70
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN------------------------- 352
G QVH Y I+ G + V N +L++YA+ L +
Sbjct: 71 G-QVHCYAIRSGLLCHSHVSNTLLSLYARLGNLASLKRKFEEIIEPDVYSWTTLLSASFK 129
Query: 353 ------ALLVFKELGKNADSVSWNSIIAACLQ---HNQAEELFRLFSRMLASQIKPDHIT 403
A VF ++ + D WN++I C + H + ELFR ++ ++ D
Sbjct: 130 LGDIEYAFEVFDKMPERDDVAVWNAMITGCKESGYHGTSIELFREMHKL---GVRHDKFG 186
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
F V+ C SL+ Q+H + K G V+N L+ +Y C + AR +F E
Sbjct: 187 FATVLSMC-YYGSLDFGKQVHSLVIKAGFFVASSVVNALITMYFNCQVVVDARLVF---E 242
Query: 464 NPDV-----VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
DV V+++ +I G A F +E+L +F +M G+ P +T V V+++CS
Sbjct: 243 EADVAVRDQVTFNVVIDGLAGFK-REESLLVFRQMVEAGLRPTDLTFVSVMSSCS 296
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 171/581 (29%), Positives = 274/581 (47%), Gaps = 50/581 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQ--NHILNMYGKCGSLEDARMGFDKMPQ 98
L+ AC +LRSL R +H +LL ++ +L+ Y G L AR D P+
Sbjct: 27 LLPACGTLRSL---RALHGRLLLLTSGLLRGIRARTKLLSCYAALGDLASARGVLDGTPR 83
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ--FTFGSIIKACSGLGSVCLGR 156
+ ++ M+ DA+ L+ M + Q +KAC GR
Sbjct: 84 PDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAAQADVVLSLALKACVRSADFRYGR 143
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+LH V+K+ G+ N+L+ MY K + +AR VF + ++V SW SM++ + G
Sbjct: 144 RLHCDVVKAG-GADGFVMNSLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGSIQNG 202
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
E L FNEM + P+E+ SV +AC+
Sbjct: 203 IAEEGLVLFNEMRQDNVH-PSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFIS 261
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR +F+E++ D+ W A+I G + +A+ LF + ++
Sbjct: 262 ASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIV 321
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P+ +T+ +++ A L G VH+ +K+G + V NA++ MYAKC L A +
Sbjct: 322 PNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSI 381
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + D V+WNS++A ++ A E LF+RM I PD I+ + + AC +A
Sbjct: 382 FGRILIK-DVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLAD 440
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L + H Y K +++V L+++Y KC L SA+++FN M + + V+WS++I G
Sbjct: 441 LHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGG 500
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y G ++ LF M + PN V +L+ACSH G+V G + M + I P
Sbjct: 501 YGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITP 560
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ +H +C+VD++ARAG + EA +FI M A I VW S L
Sbjct: 561 SMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFL 601
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 196/424 (46%), Gaps = 53/424 (12%)
Query: 6 VSSLCKQNLYNEALVAY-DFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHIL 62
+S + + E LV + + Q+N + PS Y +++AC+ L L GR +H ++
Sbjct: 195 LSGSIQNGIAEEGLVLFNEMRQDN----VHPSEYTMVSVLAACAMLGGLHQGRWIHGSVI 250
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + +L+MY KC +EDAR FD++ ++V WTAMI G +QN + DA++
Sbjct: 251 KYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQ 310
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L++ ++P T ++I A + L + LGR +HA +K + +NAL+ MY
Sbjct: 311 LFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYA 370
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM-------------- 228
K + +A ++F I KDV +W SM+A +S+ G E+L FN M
Sbjct: 371 KCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVN 430
Query: 229 ----------LHHG----------AYQPNEFI---FGSVFSACSNF--ARILFNEIDSPD 263
LH G A+ N ++ +++S C++ A+ +FN++ +
Sbjct: 431 ALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRN 490
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+W+A+I G ++ ++ LF+EM + P+ + S+L AC + G +
Sbjct: 491 SVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKE--- 547
Query: 324 YIIKMGFDSNVPVCNA----ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
Y M N+ ++ + A+ L AL + + A W S + C H
Sbjct: 548 YFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLH 607
Query: 380 NQAE 383
++ E
Sbjct: 608 SRLE 611
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 161/533 (30%), Positives = 253/533 (47%), Gaps = 109/533 (20%)
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R H V+KS N L++ Y + R+ +AR VF GI ++ S+ ++++A+++L
Sbjct: 37 RAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARL 96
Query: 216 GYELEAL-----------CHFNEML----HHG------------AYQPNEFI-----FGS 243
G EA C +N ++ HG A ++F+ F S
Sbjct: 97 GRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFAS 156
Query: 244 VFSACSNF----------------------------------------ARILFNEIDSPD 263
SAC+ AR +F+ + +
Sbjct: 157 ALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERN 216
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+ SWN+LI + EA+ LF EM PD +T+ S++ AC G +G QVH+
Sbjct: 217 VVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHA 276
Query: 324 YIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA------------------ 364
+++K ++ + NA++ MYAKC A +F + +
Sbjct: 277 HMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVE 336
Query: 365 ------------DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
+ ++WN +IAA Q+ + EE RLF ++ I P H T+ +V+ AC
Sbjct: 337 DAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACG 396
Query: 413 KMASLEMVTQLHCYITKTGLAFD------VFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
+A L++ Q H ++ K G FD VFV N L+D+Y+K GS+ K+F M D
Sbjct: 397 NIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARD 456
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
VSW+++I+GYAQ G +AL LF RM +P+ VT++GVL+AC H GLV+EG +
Sbjct: 457 NVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFH 516
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M ++GI P+R+H +C+VDLL RAG + EAE+ I M + D V+W SLL +
Sbjct: 517 FMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGA 569
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 198/444 (44%), Gaps = 82/444 (18%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++A +SAC++ + L+ G +VH + S DV + +++MY KC DAR FD M
Sbjct: 153 SFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAM 212
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+RNVVSW ++I QN +A+ L+++M+ +G P + T S++ AC+GL + GR
Sbjct: 213 PERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGR 272
Query: 157 QLHAHVIKSEH-GSHLIAQNALIAMYTKFDR----------------------------- 186
Q+HAH++K + ++ NAL+ MY K R
Sbjct: 273 QVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKS 332
Query: 187 --ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ DA+ VFS + K+V +W +IAA+++ G E EA+ F + L + P + +G+V
Sbjct: 333 ANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQ-LKRDSIWPTHYTYGNV 391
Query: 245 FSACSNFARI----------------------------------------------LFNE 258
+AC N A + +F
Sbjct: 392 LNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFER 451
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ + D SWNA+I G A + A +A+ LF M PD +T+ +L AC + +G
Sbjct: 452 MAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEG 511
Query: 319 MQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
+ H G + ++ + + L A + K++ DSV W S++ AC
Sbjct: 512 RRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACR 571
Query: 378 QHNQAEELFRLFSRMLASQIKPDH 401
H E R R+ ++ P++
Sbjct: 572 LHKNVELGERTAGRLF--ELDPEN 593
>gi|302143464|emb|CBI22025.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 145/441 (32%), Positives = 237/441 (53%), Gaps = 32/441 (7%)
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
F ++++C S+ LG+QLH+ +I S S N L+ +Y+K ++ A +F +
Sbjct: 55 FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE 258
RK++ S +I +G ++ +++ AR +F+E
Sbjct: 115 RKNIMSCNILI---------------------NGYFRSGDWVT----------ARKMFDE 143
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ ++A+WNA++AG+ E + LFS M + LPD + S+L C G L G
Sbjct: 144 MPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAG 203
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
QVH Y+ K GF+ N+ V +++ MY KC L + + + + + V+WN++IA Q
Sbjct: 204 RQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAM-PSQNVVAWNTLIAGRAQ 262
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+ EE+ ++ M + +PD ITF V+ +C+++A+L Q+H + K G + V V
Sbjct: 263 NGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSV 322
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
++ L+ +Y +CG L + K+F EN DVV WSS+I Y G G EA+ LF +M +
Sbjct: 323 ISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKL 382
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAE 558
N VT + +L ACSH GL E+G+ + +M +YG+ P EH +C+VDLL R G V EAE
Sbjct: 383 EANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAE 442
Query: 559 DFINQMACDADIVVWKSLLAS 579
I M AD++ WK+LL++
Sbjct: 443 ALIRSMPVKADVITWKTLLSA 463
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 213/458 (46%), Gaps = 80/458 (17%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
NL ++ + F + +++I PS ++ L+ +C S SL LG+++H I+ S C D +
Sbjct: 30 NLCSKGHLKQAFDRFSSHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFI 89
Query: 73 QNHILNMYGKCGSLEDA-------------------------------RMGFDKMPQRNV 101
NH+LN+Y KCG L+ A R FD+MP+RNV
Sbjct: 90 SNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNV 149
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
+W AM+AG Q + + L+ +M + G +P +F GS+++ C+GL ++ GRQ+H +
Sbjct: 150 ATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGY 209
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
V K +L+ ++L MY K + + + + ++V +W ++IA ++ GY E
Sbjct: 210 VRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEV 269
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------------------------- 254
L +N M+ ++P++ F SV S+CS A +
Sbjct: 270 LDQYN-MMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLIS 328
Query: 255 -------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
+F E ++ D+ W+++IA H EA+ LF++M +L + +T
Sbjct: 329 MYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVT 388
Query: 302 VHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
SLL AC +G++ ++ K G + ++ + + + A + + +
Sbjct: 389 FLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSM 448
Query: 361 GKNADSVSWNSIIAACLQHNQ-------AEELFRLFSR 391
AD ++W ++++AC H + +EE+FRL R
Sbjct: 449 PVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPR 486
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 40/228 (17%)
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
L + F R +S I + F+ ++ +C SL + QLH I +G + D F+ N L++
Sbjct: 37 LKQAFDR-FSSHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLN 95
Query: 445 IYIKCGSLG-------------------------------SARKLFNFMENPDVVSWSSL 473
+Y KCG L +ARK+F+ M +V +W+++
Sbjct: 96 LYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAM 155
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN--- 530
+ G QF +E L LF+RM LG P+ L VL C+ + + G ++ +
Sbjct: 156 VAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGF 215
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
E+ ++ S + + + G + E E I M ++V W +L+A
Sbjct: 216 EFNLVVV----SSLAHMYMKCGSLGEGERLIRAMP-SQNVVAWNTLIA 258
>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1005
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 164/584 (28%), Positives = 294/584 (50%), Gaps = 44/584 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++ L+ AC LR ++ G ++H ++ + N +++MY K L A+ FD
Sbjct: 164 SFPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDAS 223
Query: 97 PQR-NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
++ + V W ++++ S + + + ++L+ +M +G +T S + AC G LG
Sbjct: 224 QEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLG 283
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+++HA V+KS H + NALIAMY + ++L+A + + DV +W S+I + +
Sbjct: 284 KEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQN 343
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL-------------------- 255
EAL F +M+ G ++P+E SV +A + +L
Sbjct: 344 LMYKEALQFFCDMIAAG-HKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLV 402
Query: 256 --------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
F + DL SW +IAG A + EA+ LF ++ + +
Sbjct: 403 GNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRM 462
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
D + + S+L AC ++ ++H +I++ G V + N ++ +Y KC + A
Sbjct: 463 EIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGLIDTV-IQNELVDVYGKCRNMGYASR 521
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF+ + K D VSW S+I++ + E LF RM + + D + ++ A A ++
Sbjct: 522 VFESI-KGKDVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLS 580
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+L+ ++H Y+ + G + + ++D+Y CG L SA+ +F+ +E ++ ++S+I
Sbjct: 581 ALKKGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMIN 640
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
Y GCG +++LF +MR VSP+ ++ + +L ACSH GL++EG +IME EY +
Sbjct: 641 AYGMHGCGKASVELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRRFLKIMELEYKLE 700
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P EH C+VD+L RA CV EA +F+ M + VW +LLA+
Sbjct: 701 PWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTTEVWCALLAA 744
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/478 (29%), Positives = 239/478 (50%), Gaps = 55/478 (11%)
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
++L + GK +L ++ FD+M R +W A+I N + A+ +Y M GV
Sbjct: 102 YLLELCGKSRALSQEKV-FDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPL 160
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
++F ++KAC L + G +LH ++K S NAL++MY K D + A+ +F
Sbjct: 161 DLYSFPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLF 220
Query: 195 SGIARK-DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA- 252
K D W S+++++S G LE L F EM G N + S +AC F+
Sbjct: 221 DASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGP-ASNSYTIVSALTACEGFSY 279
Query: 253 ----------------------------------------RILFNEIDSPDLASWNALIA 272
RIL +++ D+ +WN+LI
Sbjct: 280 AKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRIL-RLMNNADVVTWNSLIK 338
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT-LYQGMQVHSYIIKMGFD 331
G + EA+ F +M PD +++ S++ A GRL+ L GM++H+Y+IK G+D
Sbjct: 339 GYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAAS-GRLSNLLAGMELHAYVIKHGWD 397
Query: 332 SNVPVCNAILTMYAKCSVLC---NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
SN+ V N ++ MY+KC++ C A L+ E D +SW +IIA ++ E +L
Sbjct: 398 SNLLVGNTLIDMYSKCNLTCYMGRAFLMMHE----KDLISWTTIIAGYALNDCHVEALQL 453
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
F + +++ D + ++ AC+ + S+ +V ++HC+I + GL D + N L+D+Y K
Sbjct: 454 FRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGL-IDTVIQNELVDVYGK 512
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
C ++G A ++F ++ DVVSW+S+I A G +EA++LF RM G+ + V L+
Sbjct: 513 CRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSVALL 570
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 140/271 (51%)
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+F+E+ +WNALI S+ A+ ++ MR + D + LL AC
Sbjct: 118 VFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKLRD 177
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
+ G ++H ++K+GF+S + NA+++MYAK L A +F + D+V WNSI++
Sbjct: 178 IRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSILS 237
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
+ ++ E +LF M + + T + AC + ++ ++H + K+ +F
Sbjct: 238 SYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSF 297
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
+V+V N L+ +Y +CG + A ++ M N DVV+W+SLI GY Q EAL+ F M
Sbjct: 298 EVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMI 357
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
+ G P+ V+L V+ A + + G+ L+
Sbjct: 358 AAGHKPDEVSLTSVIAASGRLSNLLAGMELH 388
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 196/439 (44%), Gaps = 57/439 (12%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
+I+A L +L G ++H +++ ++++ N +++MY KC F M +++
Sbjct: 371 VIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKD 430
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
++SWT +IAG + N +A++L+ + + + + GSI++ACS L S+ + +++H
Sbjct: 431 LISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHC 490
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
H+++ +I QN L+ +Y K + A VF I KDV SW SMI++ + G E E
Sbjct: 491 HILRKGLIDTVI-QNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENE 549
Query: 221 ALCHFNEMLH-----------------------------HGAYQPNEF-IFGSV------ 244
A+ F M HG F + GS+
Sbjct: 550 AVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVVD 609
Query: 245 -FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
++ C + A+ +F+ I+ L + ++I H ++ LF++MR + PD ++
Sbjct: 610 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHIS 669
Query: 302 VHSLLCACIGRLTLYQG---MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+LL AC L +G +++ K+ VC ++ M + + + A K
Sbjct: 670 FLALLYACSHAGLLDEGRRFLKIMELEYKLEPWPEHYVC--LVDMLGRANCVVEAFEFVK 727
Query: 359 ELGKNADSVSWNSIIAACLQHNQ-------AEELFRLFSR-----MLASQIKPDHITFND 406
+ + W +++AAC H++ A+ L L + +L S + + +ND
Sbjct: 728 MMKTEPTTEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWND 787
Query: 407 VMGACAKMASLEMVTQLHC 425
V AKM + M C
Sbjct: 788 VEKVRAKMKASGMEKHPGC 806
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
S K+F+ M + +W++LI Y G AL ++ MR GV +L + +L AC
Sbjct: 114 SQEKVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACG 173
Query: 514 HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
+ + G L+ M + G T + +V + A+ + A+ + D V+W
Sbjct: 174 KLRDIRSGTELH-CMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLW 232
Query: 574 KSLLAS 579
S+L+S
Sbjct: 233 NSILSS 238
>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 172/595 (28%), Positives = 275/595 (46%), Gaps = 88/595 (14%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGR----KVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
R+RP SL+SL L ++HD + + PD L N ++ + G
Sbjct: 37 RVRPKR-------GPSLKSLVLSHAAAGRMHDALAAVRSSPDAFLHNVVIRGFADAG--- 86
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
+P+ + ++ AM+A +G P +FTF ++K C+
Sbjct: 87 --------LPEAALAAYRAMLA--------------------AGARPDRFTFPVVVKCCA 118
Query: 148 GLGSVCLGRQLHAHVIK-SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
LG++ GR H+ I+ GS + N+L+A Y K + DA VF G+ +D+ +W
Sbjct: 119 RLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWN 178
Query: 207 SMIAAFSKLGYELEALCHFNEM------------------------------------LH 230
SM+ + G AL F EM +
Sbjct: 179 SMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIR 238
Query: 231 HGAYQPNEFIFGS----VFSACSNFARI--LFNEIDSPDLASWNALIAGVASHSNANEAM 284
HG Q + G+ ++ C A +F + S + +WN +I G A + EA
Sbjct: 239 HGLEQ--DVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAF 296
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
F +M+ + +T +LL AC + G VH Y+ + F +V + A+L MY
Sbjct: 297 DCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMY 356
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
+K + ++ +F ++ N VSWN++IAA + E LF +L + PD+ T
Sbjct: 357 SKVGKVKSSETIFGQM-TNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTM 415
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
+ V+ A + L Q+H YI + + V N +M +Y +CG + S+RK+F+ M
Sbjct: 416 SAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAG 475
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
DV+SW+++I+GYA G G AL++F+ M+S G+ PN T V VLTACS G+ +EG
Sbjct: 476 KDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQ 535
Query: 525 YRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ +M+ +YGIIP EH C+ DLL RAG + E FI + +W SLL +
Sbjct: 536 FNLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTA 590
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 108/214 (50%), Gaps = 9/214 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N+ +++ + +YNEA+ + N + T + ++ A L L+ R++H +I+
Sbjct: 381 NNMIAAYMYKEMYNEAITLF-LELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIV 439
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ ++ N +++MY +CG + +R FDKM ++V+SW +I G + + Q A++
Sbjct: 440 RLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALE 499
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ +M +G+ P + TF S++ ACS G G + ++++ ++G +I Q T
Sbjct: 500 MFSEMKSNGLQPNESTFVSVLTACSVSGMADEG-WIQFNLMQRDYG--IIPQIEHYGCMT 556
Query: 183 K-FDRILDARNVFSGIARKDVTS----WGSMIAA 211
R D R V I +T WGS++ A
Sbjct: 557 DLLGRAGDLREVLKFIESIPITPTFRIWGSLLTA 590
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 181/618 (29%), Positives = 291/618 (47%), Gaps = 51/618 (8%)
Query: 5 YVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLS 64
YV LC Y EA++ + + T L+ AC + L+LG+++H + L +
Sbjct: 136 YVGCLC----YKEAVLLF-VEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRN 190
Query: 65 KC-QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
D + ++ Y + ++ R+ F M RN+VSW A+I G A+KL
Sbjct: 191 GLFDMDAYVGTALVGFYMRFDAVLSHRV-FSLMLVRNIVSWNAIITGFLNVGDCAKALKL 249
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
Y ML G+ T +I+AC+ G + LG QLH IK + L NAL+ MY+
Sbjct: 250 YSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSD 309
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM--------------- 228
+ + +F+ + D W SMI+++ G+ EA+ F +M
Sbjct: 310 NGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIM 369
Query: 229 ------LHHG-------------------AYQPNEFIFGSVFSACSNFARILFNEIDSPD 263
L+ G AY N + V A+ +F ++ D
Sbjct: 370 LSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLD 429
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+ SWN +I+ A +A LF M + E+ + T+ SLL C L G +H
Sbjct: 430 VISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHG 489
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ IK G + N + ++ MY C A +F + D VSWNS+I++ ++++ A
Sbjct: 490 FAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQR-DLVSWNSLISSYIKNDNAG 548
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFDVFVMNG 441
+ LF+ M+ S+++P+ +T +++ +C ++A L + LH Y T+ L D + N
Sbjct: 549 KALLLFNHMI-SELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANA 607
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
+ +Y +CG L A K+F ++ +VSW+++I GY G G +A F +M G PN
Sbjct: 608 FITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPN 667
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
V+ VL+ACSH GL GL L+ M ++GI P H C+VDLL R G EA FI
Sbjct: 668 NVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFI 727
Query: 562 NQMACDADIVVWKSLLAS 579
N M + D +W++LL+S
Sbjct: 728 NSMPIEPDASIWRALLSS 745
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 157/610 (25%), Positives = 290/610 (47%), Gaps = 51/610 (8%)
Query: 14 LYNEALVAYDFSQ-NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
L N+ + ++Q + I +T ++ AC L ++ G ++H I DV +
Sbjct: 38 LKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIRGLDLINDVRV 97
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
+++ Y KCG + +A F +MP+R++VSW A+I+G +A+ L+++M ++G+
Sbjct: 98 GTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGL 157
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDAR 191
P T +++ AC + + LG+++H + +++ AL+ Y +FD +L R
Sbjct: 158 TPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLSHR 217
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM----------------------- 228
VFS + +++ SW ++I F +G +AL ++ M
Sbjct: 218 -VFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYG 276
Query: 229 -------LHHGAYQPN----EFIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIA 272
LH A + N FI ++ + S+ + LFN + + D A WN++I+
Sbjct: 277 CLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMIS 336
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC--IGRLTLYQGMQVHSYIIKMGF 330
EA++LF +MR + D T+ +L C + +++ G +H++ +K G
Sbjct: 337 SYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIW-GRGLHAHAMKSGI 395
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+ + + NA+L+MY K + + A VF+++ + D +SWN++I+A Q + F LF
Sbjct: 396 ELDAYLGNALLSMYVKHNQITAAQYVFEKM-RGLDVISWNTMISAFAQSMFRAKAFELFL 454
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
M S+IK + T ++ C + L +H + K GL + + L ++YI CG
Sbjct: 455 MMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCG 514
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+A +F D+VSW+SLI Y + +AL LF M S + PN VT++ +LT
Sbjct: 515 DERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMIS-ELEPNSVTIINILT 573
Query: 511 ACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
+C+ + + G LH Y E + + + + AR G + AE + +
Sbjct: 574 SCTQLAHLPLGQCLHAY-TTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRS 632
Query: 569 DIVVWKSLLA 578
IV W +++
Sbjct: 633 -IVSWNAMIT 641
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 202/451 (44%), Gaps = 45/451 (9%)
Query: 104 WTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI 163
W ++I ++ ++ + Y QM G+ P T ++KAC L ++ G ++H+ +
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87
Query: 164 KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS---------- 213
+ + + AL+ Y K + +A VF + +D+ SW ++I+ +
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147
Query: 214 ------------------------------KLGYELEALCHFNEMLHHGAYQPNEFI-FG 242
+LG E+ C N + AY + F
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207
Query: 243 SVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
F A + +F+ + ++ SWNA+I G + + +A+ L+S M + D +T+
Sbjct: 208 MRFDAV--LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTM 265
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
++ AC L GMQ+H IK +++ + NA+L MY+ L ++ +F +
Sbjct: 266 LVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAV-P 324
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
+D+ WNS+I++ + E LF +M +IK D T ++ C + + +
Sbjct: 325 TSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGR 384
Query: 423 -LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
LH + K+G+ D ++ N L+ +Y+K + +A+ +F M DV+SW+++I +AQ
Sbjct: 385 GLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSM 444
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
+A +LF M + N T+V +L C
Sbjct: 445 FRAKAFELFLMMCESEIKFNSYTIVSLLAFC 475
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/479 (21%), Positives = 200/479 (41%), Gaps = 56/479 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQL-GRKVHDHI 61
N +SS + EA+ + I+ T A ++S C+ L + GR +H H
Sbjct: 332 NSMISSYIGFGFHAEAIALF-IKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHA 390
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ S + D L N +L+MY K + A+ F+KM +V+SW MI+ +Q+ A
Sbjct: 391 MKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAF 450
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+L++ M +S + +T S++ C + GR +H IK+ + +L MY
Sbjct: 451 ELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMY 510
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
A N+F+ ++D+ SW S+I+++ K +AL FN M+ +PN
Sbjct: 511 INCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISE--LEPNSVTI 568
Query: 242 GSVFSACSNFARI------------------------------------------LFNEI 259
++ ++C+ A + +F +
Sbjct: 569 INILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTL 628
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
+ + SWNA+I G H +A F++M D P+ ++ S+L AC G+
Sbjct: 629 QTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGL 688
Query: 320 QV-HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
Q+ HS + G + ++ + + A+ + D+ W +++++C
Sbjct: 689 QLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQI 748
Query: 379 HNQAEELFRLFSRMLASQIKPDH----ITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
+ + L +F +++ +++P + I +++ A + V Q+ ++ + GL
Sbjct: 749 KSNNKLLETIFGKLV--ELEPSNPGNFILLSNIYAAAGLWSE---VVQIRKWLRERGLG 802
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 169/318 (53%), Gaps = 13/318 (4%)
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL-TLYQGMQVHSYI 325
WN++I N + +S +++M + PD T+ +L AC GRL + G+++HS I
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKAC-GRLNAIGNGVRIHSCI 86
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA---ACLQHNQA 382
+ ++V V A++ Y KC ++ A VF E+ + D VSWN++I+ CL + +A
Sbjct: 87 RGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPER-DLVSWNALISGYVGCLCYKEA 145
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL-AFDVFVMNG 441
LF M + + P+ T ++ AC +M L + ++H Y + GL D +V
Sbjct: 146 ---VLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTA 202
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+ Y++ ++ S R +F+ M ++VSW+++I G+ G +ALKL++ M G+ +
Sbjct: 203 LVGFYMRFDAVLSHR-VFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFD 261
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
VT++ V+ AC+ G + G+ L++ + ++ +I + ++++ + G + +
Sbjct: 262 AVTMLVVIQACAEYGCLRLGMQLHQ-LAIKFNLINDLFILNALLNMYSDNGSLESSWALF 320
Query: 562 NQMACDADIVVWKSLLAS 579
N + +D +W S+++S
Sbjct: 321 NAVPT-SDAALWNSMISS 337
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 78/150 (52%)
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
S WNSII + + +++M + I PD T V+ AC ++ ++ ++H
Sbjct: 25 SKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHS 84
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
I L DV V L+D Y KCG + A K+F M D+VSW++LI GY C E
Sbjct: 85 CIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKE 144
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
A+ LF M+ G++PN T+V +L AC +
Sbjct: 145 AVLLFVEMKKAGLTPNSRTVVALLLACGEM 174
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 181/618 (29%), Positives = 291/618 (47%), Gaps = 51/618 (8%)
Query: 5 YVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLS 64
YV LC Y EA++ + + T L+ AC + L+LG+++H + L +
Sbjct: 136 YVGCLC----YKEAVLLF-VEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRN 190
Query: 65 KC-QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
D + ++ Y + ++ R+ F M RN+VSW A+I G A+KL
Sbjct: 191 GLFDMDAYVGTALVGFYMRFDAVLSHRV-FSLMLVRNIVSWNAIITGFLNVGDCAKALKL 249
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
Y ML G+ T +I+AC+ G + LG QLH IK + L NAL+ MY+
Sbjct: 250 YSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSD 309
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM--------------- 228
+ + +F+ + D W SMI+++ G+ EA+ F +M
Sbjct: 310 NGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIM 369
Query: 229 ------LHHG-------------------AYQPNEFIFGSVFSACSNFARILFNEIDSPD 263
L+ G AY N + V A+ +F ++ D
Sbjct: 370 LSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLD 429
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+ SWN +I+ A +A LF M + E+ + T+ SLL C L G +H
Sbjct: 430 VISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHG 489
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ IK G + N + ++ MY C A +F + D VSWNS+I++ ++++ A
Sbjct: 490 FAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQR-DLVSWNSLISSYIKNDNAG 548
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFDVFVMNG 441
+ LF+ M+ S+++P+ +T +++ +C ++A L + LH Y T+ L D + N
Sbjct: 549 KALLLFNHMI-SELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANA 607
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
+ +Y +CG L A K+F ++ +VSW+++I GY G G +A F +M G PN
Sbjct: 608 FITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPN 667
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
V+ VL+ACSH GL GL L+ M ++GI P H C+VDLL R G EA FI
Sbjct: 668 NVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFI 727
Query: 562 NQMACDADIVVWKSLLAS 579
N M + D +W++LL+S
Sbjct: 728 NSMPIEPDASIWRALLSS 745
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 157/610 (25%), Positives = 290/610 (47%), Gaps = 51/610 (8%)
Query: 14 LYNEALVAYDFSQ-NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
L N+ + ++Q + I +T ++ AC L ++ G ++H I DV +
Sbjct: 38 LKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIRGLDLINDVRV 97
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
+++ Y KCG + +A F +MP+R++VSW A+I+G +A+ L+++M ++G+
Sbjct: 98 GTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGL 157
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDAR 191
P T +++ AC + + LG+++H + +++ AL+ Y +FD +L R
Sbjct: 158 TPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLSHR 217
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM----------------------- 228
VFS + +++ SW ++I F +G +AL ++ M
Sbjct: 218 -VFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYG 276
Query: 229 -------LHHGAYQPN----EFIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIA 272
LH A + N FI ++ + S+ + LFN + + D A WN++I+
Sbjct: 277 CLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMIS 336
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC--IGRLTLYQGMQVHSYIIKMGF 330
EA++LF +MR + D T+ +L C + +++ G +H++ +K G
Sbjct: 337 SYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIW-GRGLHAHAMKSGI 395
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+ + + NA+L+MY K + + A VF+++ + D +SWN++I+A Q + F LF
Sbjct: 396 ELDAYLGNALLSMYVKHNQITAAQYVFEKM-RGLDVISWNTMISAFAQSMFRAKAFELFL 454
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
M S+IK + T ++ C + L +H + K GL + + L ++YI CG
Sbjct: 455 MMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCG 514
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+A +F D+VSW+SLI Y + +AL LF M S + PN VT++ +LT
Sbjct: 515 DERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMIS-ELEPNSVTIINILT 573
Query: 511 ACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
+C+ + + G LH Y E + + + + AR G + AE + +
Sbjct: 574 SCTQLAHLPLGQCLHAYTT-RREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRS 632
Query: 569 DIVVWKSLLA 578
IV W +++
Sbjct: 633 -IVSWNAMIT 641
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 186/424 (43%), Gaps = 68/424 (16%)
Query: 104 WTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI 163
W ++I ++ ++ + Y QM G+ P T ++KAC L ++ G ++H+
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHS--- 84
Query: 164 KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALC 223
F R LD N DV +++ + K G EA
Sbjct: 85 --------------------FIRGLDLIN--------DVRVGTALVDFYCKCGLVAEA-- 114
Query: 224 HFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEA 283
+F E+ DL SWNALI+G EA
Sbjct: 115 -----------------------------SKVFVEMPERDLVSWNALISGYVGCLCYKEA 145
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILT 342
+ LF EM+ L P+ TV +LL AC L L G ++H Y ++ G FD + V A++
Sbjct: 146 VLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVG 205
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
Y + + + + L +N VSWN+II L + +L+S ML IK D +
Sbjct: 206 FYMRFDAVLSHRVFSLMLVRNI--VSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAV 263
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
T V+ ACA+ L + QLH K L D+F++N L+++Y GSL S+ LFN +
Sbjct: 264 TMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAV 323
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV---GLVE 519
D W+S+I Y FG EA+ LF +MR + ++ T+ +L+ C+ + +
Sbjct: 324 PTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWG 383
Query: 520 EGLH 523
GLH
Sbjct: 384 RGLH 387
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 170/318 (53%), Gaps = 13/318 (4%)
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL-TLYQGMQVHSYI 325
WN++I N + +S +++M + PD T+ +L AC GRL + G+++HS+I
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKAC-GRLNAIGNGVRIHSFI 86
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA---ACLQHNQA 382
+ ++V V A++ Y KC ++ A VF E+ + D VSWN++I+ CL + +A
Sbjct: 87 RGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPER-DLVSWNALISGYVGCLCYKEA 145
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL-AFDVFVMNG 441
LF M + + P+ T ++ AC +M L + ++H Y + GL D +V
Sbjct: 146 ---VLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTA 202
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+ Y++ ++ S R +F+ M ++VSW+++I G+ G +ALKL++ M G+ +
Sbjct: 203 LVGFYMRFDAVLSHR-VFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFD 261
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
VT++ V+ AC+ G + G+ L++ + ++ +I + ++++ + G + +
Sbjct: 262 AVTMLVVIQACAEYGCLRLGMQLHQ-LAIKFNLINDLFILNALLNMYSDNGSLESSWALF 320
Query: 562 NQMACDADIVVWKSLLAS 579
N + +D +W S+++S
Sbjct: 321 NAVPT-SDAALWNSMISS 337
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/479 (21%), Positives = 200/479 (41%), Gaps = 56/479 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQL-GRKVHDHI 61
N +SS + EA+ + I+ T A ++S C+ L + GR +H H
Sbjct: 332 NSMISSYIGFGFHAEAIALF-IKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHA 390
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ S + D L N +L+MY K + A+ F+KM +V+SW MI+ +Q+ A
Sbjct: 391 MKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAF 450
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+L++ M +S + +T S++ C + GR +H IK+ + +L MY
Sbjct: 451 ELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMY 510
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
A N+F+ ++D+ SW S+I+++ K +AL FN M+ +PN
Sbjct: 511 INCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISE--LEPNSVTI 568
Query: 242 GSVFSACSNFARI------------------------------------------LFNEI 259
++ ++C+ A + +F +
Sbjct: 569 INILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTL 628
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
+ + SWNA+I G H +A F++M D P+ ++ S+L AC G+
Sbjct: 629 QTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGL 688
Query: 320 QV-HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
Q+ HS + G + ++ + + A+ + D+ W +++++C
Sbjct: 689 QLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQI 748
Query: 379 HNQAEELFRLFSRMLASQIKP----DHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
+ + L +F +++ +++P + I +++ A + V Q+ ++ + GL
Sbjct: 749 KSNNKLLETIFGKLV--ELEPSNPGNFILLSNIYAAAGLWSE---VVQIRKWLRERGLG 802
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 79/150 (52%)
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
S WNSII + + +++M + I PD T V+ AC ++ ++ ++H
Sbjct: 25 SKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHS 84
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
+I L DV V L+D Y KCG + A K+F M D+VSW++LI GY C E
Sbjct: 85 FIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKE 144
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
A+ LF M+ G++PN T+V +L AC +
Sbjct: 145 AVLLFVEMKKAGLTPNSRTVVALLLACGEM 174
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 168/553 (30%), Positives = 278/553 (50%), Gaps = 49/553 (8%)
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML- 128
+ + ++N+Y G + +R FD++PQ++V +W +MI+ N ++AI + Q+L
Sbjct: 151 IFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLL 210
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
S + P +TF ++KAC G++ GR++H K ++ +LI MY++F
Sbjct: 211 VSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTG 267
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM-------------------- 228
AR++F + +D+ SW +MI+ + G +AL +EM
Sbjct: 268 IARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCP 327
Query: 229 ---------------LHHGAYQPNEFIFGSVFSACSNF-----ARILFNEIDSPDLASWN 268
+ HG + + F+ ++ + + F AR F ++ D+ SWN
Sbjct: 328 QLGDISTAMLIHLYVIKHG-LEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWN 386
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
++IA + + A F +M+ PD LT+ SL VH +I++
Sbjct: 387 SIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRR 446
Query: 329 GF-DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
G+ +V + NA++ MYAK +L +A VF E+ D +SWN++I Q+ A E
Sbjct: 447 GWLMEDVVIGNAVVDMYAKLGLLDSAHKVF-EIIPVKDVISWNTLITGYAQNGLASEAIE 505
Query: 388 LFSRMLA-SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
++ M +I P+ T+ ++ A A + +L+ ++H + KT L DVFV L+D+Y
Sbjct: 506 VYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVY 565
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KCG L A LF + V+W+++I + G ++ LKLF M GV P+ VT V
Sbjct: 566 GKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFV 625
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
+L+ACSH G VEEG +R+M+ EYGI P+ +H C+VDLL RAG + A DFI M
Sbjct: 626 SLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPL 684
Query: 567 DADIVVWKSLLAS 579
D +W +LL +
Sbjct: 685 QPDASIWGALLGA 697
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 143/488 (29%), Positives = 227/488 (46%), Gaps = 50/488 (10%)
Query: 32 RIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
IRP T+ ++ AC +L GRK+H Q +V + +++MY + G A
Sbjct: 213 EIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIA 269
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD MP R++ SW AMI+G QN A+ + +M G+ T SI+ C L
Sbjct: 270 RSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQL 329
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G + +H +VIK L NALI MY KF + DAR F + DV SW S+I
Sbjct: 330 GDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSII 389
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA------CSN------------- 250
AA+ + + A F +M +G +QP+ S+ S C N
Sbjct: 390 AAYEQNDDPVTAHGFFVKMQLNG-FQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGW 448
Query: 251 --------------FARI--------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
+A++ +F I D+ SWN LI G A + A+EA+ ++
Sbjct: 449 LMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYK 508
Query: 289 EMRD-RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
M + +E++P+ T S+L A L QGM++H +IK +V V ++ +Y KC
Sbjct: 509 MMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKC 568
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
L +A+ +F ++ + + SV+WN+II+ H AE+ +LF ML +KPDH+TF +
Sbjct: 569 GRLVDAMSLFYQVPQES-SVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSL 627
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPD 466
+ AC+ +E + + G+ + ++D+ + G L A M PD
Sbjct: 628 LSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPD 687
Query: 467 VVSWSSLI 474
W +L+
Sbjct: 688 ASIWGALL 695
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 227/465 (48%), Gaps = 52/465 (11%)
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
LHA ++ + + L+ +Y + +R F I +KDV +W SMI+A+ G+
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 197
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSAC----------------------------- 248
EA+ F ++L +P+ + F V AC
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLI 257
Query: 249 --------SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
+ AR LF+++ D+ SWNA+I+G+ + NA +A+ + EMR + + +
Sbjct: 258 HMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFV 317
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
TV S+L C + M +H Y+IK G + ++ V NA++ MYAK L +A F+++
Sbjct: 318 TVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM 377
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
D VSWNSIIAA Q++ F +M + +PD +T + A+ +
Sbjct: 378 FI-TDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNS 436
Query: 421 TQLHCYITKTG-LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
+H +I + G L DV + N ++D+Y K G L SA K+F + DV+SW++LI GYAQ
Sbjct: 437 RSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQ 496
Query: 480 FGCGDEALKLFTRMRSLG-VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
G EA++++ M + PN T V +L A +HVG +++G+ ++ +I T
Sbjct: 497 NGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHG------RVIKTN 550
Query: 539 EH-----CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
H +C++D+ + G + +A Q+ ++ V W ++++
Sbjct: 551 LHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESS-VTWNAIIS 594
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 163/394 (41%), Gaps = 41/394 (10%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I++ T ++ C L + +H +++ + D+ + N ++NMY K G+LEDAR
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F +M +VVSW ++IA QN A +++M +G P T S+ +
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSR 431
Query: 151 SVCLGRQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
R +H +++ ++ NA++ MY K + A VF I KDV SW ++I
Sbjct: 432 DCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLI 491
Query: 210 AAFSKLGYELEALCHFNEM--------------------LHHGAYQPNEFIFG------- 242
+++ G EA+ + M H GA Q I G
Sbjct: 492 TGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNL 551
Query: 243 -----------SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
V+ C A LF ++ +WNA+I+ H +A + + LF E
Sbjct: 552 HLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGE 611
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M D + PD +T SLL AC + +G + + G ++ ++ + +
Sbjct: 612 MLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGY 671
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A K++ D+ W +++ AC H E
Sbjct: 672 LEMAYDFIKDMPLQPDASIWGALLGACRIHGNIE 705
>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Glycine max]
Length = 805
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 187/693 (26%), Positives = 309/693 (44%), Gaps = 118/693 (17%)
Query: 1 FSNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDH 60
FS + SSLCK EA+ + ++ N+ + P+ Y L+ C R+L L ++H
Sbjct: 18 FSLTHFSSLCKHGRIREAVNSLT-QMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHAD 76
Query: 61 ILLSKCQPDVVLQNHILN----MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQ 116
++ K P L + +++ +Y KCG+ E A F P NV SW A+I ++
Sbjct: 77 VI--KRGPTFALNDFVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGF 134
Query: 117 ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI-AQN 175
+A+ YI+M Q G+ P F +++KAC L V G+ +HA V+K+ +
Sbjct: 135 CEEALFGYIKMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVAT 194
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
+L+ MY K + DA VF ++ ++ +W SM+ +++ G EA+ F EM G +
Sbjct: 195 SLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGV-E 253
Query: 236 PNEFIFGSVFSACSNF----------------------------------------ARIL 255
F+AC+N A ++
Sbjct: 254 VTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVV 313
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F + D+ +WN ++AG A +A+ + MR+ L D +T+ +LL L
Sbjct: 314 FRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDL 373
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS-----------------VLCNALLVF- 357
GM+ H+Y +K F+ +V V + I+ MYAKC VL N +L
Sbjct: 374 VLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAAC 433
Query: 358 KELGKNADS----------------VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
E G + ++ VSWNS+I ++ Q E +F+ M +S + P+
Sbjct: 434 AEQGLSGEALKLFFQMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSSGVMPNL 493
Query: 402 ITFNDVMGA-----------------------------------CAKMASLEMVTQLHCY 426
IT+ +M C MA L+ +H Y
Sbjct: 494 ITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRAIHGY 553
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
+ + L+ + ++ +MD+Y KCGSL A+ +F ++ ++++I YA G EA
Sbjct: 554 VMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYASHGQAREA 613
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
L LF +M G+ P+ +TL VL+ACSH GL++EG+ +++ M +E + P+ EH C+V
Sbjct: 614 LVLFKQMEKEGIVPDHITLTSVLSACSHGGLMKEGIKVFKYMVSELQMKPSEEHYGCLVK 673
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
LLA G + EA I M D + SLL +
Sbjct: 674 LLANDGQLDEALRTILTMPSHPDAHILGSLLTA 706
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 137/516 (26%), Positives = 237/516 (45%), Gaps = 52/516 (10%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN N+ + + + +G +AC++ ++ GR+ H ++ + D V
Sbjct: 233 QNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNV 292
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
L + I+N Y K G +E+A + F M ++VV+W ++AG +Q A+++ M + G
Sbjct: 293 LGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEG 352
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
+ T +++ + + LG + HA+ +K++ ++ + +I MY K R+ AR
Sbjct: 353 LRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCAR 412
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM----LHHGAYQPNEFIFGSVFSA 247
VFS + +KD+ W +M+AA ++ G EAL F +M + N IFG +
Sbjct: 413 RVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLESVPPNVVSWNSLIFGFFKNG 472
Query: 248 CSNFARILFNEIDS----PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
AR +F E+ S P+L +W +++G+ + + AM +F EM+D + P+ +++
Sbjct: 473 QVAEARNMFAEMCSSGVMPNLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSIT 532
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
S L C L G +H Y+++ ++ + +I+ MYAKC L A VFK +
Sbjct: 533 SALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFK-MCST 591
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
+ +N++I+A H QA E LF +M I PDHIT V+ AC+
Sbjct: 592 KELYVYNAMISAYASHGQAREALVLFKQMEKEGIVPDHITLTSVLSACS----------- 640
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN-----PDVVSWSSLILGYA 478
H + K G+ K+F +M + P + L+ A
Sbjct: 641 HGGLMKEGI------------------------KVFKYMVSELQMKPSEEHYGCLVKLLA 676
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
G DEAL+ M S P+ L +LTAC
Sbjct: 677 NDGQLDEALRTILTMPS---HPDAHILGSLLTACGQ 709
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 171/572 (29%), Positives = 277/572 (48%), Gaps = 48/572 (8%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGS--LEDARMGFDKMPQ--RNVVSWTAMIA 109
G +H L S + N ++N Y L A FD +P R+V SW +++
Sbjct: 31 GEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSLLN 90
Query: 110 GCSQNYQENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG 168
S ++ DA+ + ML S V+P +F + A + S G HA K
Sbjct: 91 PLS-GHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSA 149
Query: 169 -SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
S++ +L+ MY K + DAR VF G+ +++ SW +M+A ++ EA F
Sbjct: 150 VSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRL 209
Query: 228 MLHHGAYQPNEFIFGSVFSACS---------------------NFARI------------ 254
ML + +EF+ +V SA S +F +
Sbjct: 210 MLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAG 269
Query: 255 -------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC 307
+F + +W+A+I G A + A+ A+S+FS+M P T +L
Sbjct: 270 CMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLN 329
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
A L G Q H ++K+GF+ + V +A++ MYAKC + +A F +L D V
Sbjct: 330 ASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQL-YEVDIV 388
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
W ++++ +Q+ + EE L++RM I P T + ACA +A+LE QLH I
Sbjct: 389 LWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQI 448
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K GL V + L +Y KCG+L +F + + DV++W+S+I G++Q GCG+ AL
Sbjct: 449 VKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGAL 508
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
LF M+ G P+ +T + +L ACSH+GLV+ G + +M +YG+ P +H +C+VD+
Sbjct: 509 DLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDI 568
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
L+RAG + EA+DFI + D +W+ +L +
Sbjct: 569 LSRAGMLKEAKDFIESITIDHGTCLWRIVLGA 600
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 129/218 (59%), Gaps = 1/218 (0%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ G+++A S L +L +G++ H ++ + + +++ +++MY KCG + DA+ GFD++
Sbjct: 323 TFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQL 382
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ ++V WTAM++G QN + +A+ LY +M + G++P + T S ++AC+G+ ++ G+
Sbjct: 383 YEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGK 442
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
QLH ++K G +AL MY+K + D +VF I +DV +W S+I+ FS+ G
Sbjct: 443 QLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNG 502
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
AL F EM G P+ F ++ ACS+ +
Sbjct: 503 CGNGALDLFEEMKMEGTI-PDNITFINILCACSHMGLV 539
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 173/376 (46%), Gaps = 40/376 (10%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++SA S L +G ++H I+ V ++N ++ MY K G + A F+ +RN
Sbjct: 226 VLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERN 285
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
++W+AMI G +QN + + A+ ++ QM +G P +FTF ++ A S LG++ +G+Q H
Sbjct: 286 SITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHG 345
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
++K + ++AL+ MY K I DA+ F + D+ W +M++ + G E
Sbjct: 346 LMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEE 405
Query: 221 ALCHFNEMLHHG-------------------AYQPNEFI------------------FGS 243
AL + M G A +P + + +
Sbjct: 406 ALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALST 465
Query: 244 VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
++S C N +F I D+ +WN++I+G + + N A+ LF EM+ +PD +T
Sbjct: 466 MYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNIT 525
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
++LCAC + +G + S + K G + ++ + ++ +L A + +
Sbjct: 526 FINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESI 585
Query: 361 GKNADSVSWNSIIAAC 376
+ + W ++ AC
Sbjct: 586 TIDHGTCLWRIVLGAC 601
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 1/159 (0%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VS + + EAL Y + I ST A + AC+ + +L+ G+++H I+
Sbjct: 394 VSGHVQNGEHEEALTLYA-RMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYG 452
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ + + MY KCG+LED F ++P R+V++W ++I+G SQN N A+ L+
Sbjct: 453 LGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFE 512
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK 164
+M G +P TF +I+ ACS +G V G + + + K
Sbjct: 513 EMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTK 551
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 160/481 (33%), Positives = 242/481 (50%), Gaps = 50/481 (10%)
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
S++K C+ S+ +Q+H +I + + N L+ + +A +FS I
Sbjct: 36 SLLKQCTSTKSL---QQIHTQMIINA----IHKPNFLLHRFIDLKDFNNASLLFSQIPYP 88
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------- 251
+ ++ MI + + F + +PN F + VF AC+N
Sbjct: 89 NEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCA 148
Query: 252 -------------------------------ARILFNEIDSPDLASWNALIAGVASHSNA 280
AR +F+EI DL SWN++I+G + A
Sbjct: 149 HSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYA 208
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
+A+ LF EMRD PD +T+ S+L AC L G + ++++ D N V +A+
Sbjct: 209 GDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSAL 268
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+ MY KC L +A VF + K D V+WN++I Q+ ++E LFS M S + PD
Sbjct: 269 IGMYGKCGDLSSARRVFDRMVKK-DVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPD 327
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
IT V+ ACA + +L+ L Y ++ GL D++V L+D+Y KCGSL A ++F
Sbjct: 328 KITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFE 387
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG--VSPNLVTLVGVLTACSHVGLV 518
M + VSW+++I A G E+L LF RM G V PN ++ +GVL+AC H GLV
Sbjct: 388 DMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLV 447
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+EG L+ +M + +G++P EH SC+VDLLARAG VHEA DFI +M D VV +LL
Sbjct: 448 DEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLG 507
Query: 579 S 579
+
Sbjct: 508 A 508
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 207/447 (46%), Gaps = 51/447 (11%)
Query: 1 FSNDYVSSLCKQNL---YNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGR 55
+ N+Y ++ + L + + + +F + IRP+ TY + AC++L L G+
Sbjct: 87 YPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQ 146
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
H +L S D +++ ++ MY +CG L AR FD++ ++++VSW +MI+G S+
Sbjct: 147 CAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMG 206
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
DA+ L+ +M +G P + T SI+ AC LG + LG + V+++E + +
Sbjct: 207 YAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGS 266
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
ALI MY K + AR VF + +KDV +W +MI +++ G EA+ F+ M G
Sbjct: 267 ALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGV-N 325
Query: 236 PNEFIFGSVFSACS-----NFARIL----------------------------------- 255
P++ V SAC+ +F + L
Sbjct: 326 PDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRV 385
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR--ELLPDGLTVHSLLCACIGRL 313
F ++ + SWNA+I+ +A H E++SLF M + P+ ++ +L AC+
Sbjct: 386 FEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAG 445
Query: 314 TLYQGMQVHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
+ +G Q+ + G + + ++ + A+ + A +++ + D V ++
Sbjct: 446 LVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGAL 505
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKP 399
+ AC + + R+ +L +++P
Sbjct: 506 LGACQKRRNVDVSERVMHMLL--EMEP 530
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 184/620 (29%), Positives = 302/620 (48%), Gaps = 97/620 (15%)
Query: 47 SLRSLQLGR--KVHDHI--LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVV 102
+LR QLGR ++ + + L + ++V N +++ Y K G + +AR FD MPQRN+V
Sbjct: 19 NLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLV 78
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
SW +MIAG N DA +L+ +M + + +++ +I + +G + R+L ++
Sbjct: 79 SWNSMIAGYLHNELVEDAARLFDRMFKRDI----YSWTLMITCYTRIGELEKARELF-NL 133
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK-----LGY 217
+ + + + +NALIA Y K +A+ +F + K+V SW S+++ ++K LG
Sbjct: 134 LPDKQDT--VCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGL 191
Query: 218 EL-EALCHFN--------------------EMLHHGAYQPNEFIFGSVFSACSNFARI-- 254
+ EA+ N M PN + ++ S +++ R+
Sbjct: 192 QFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTE 251
Query: 255 ---LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE------LLPDGLTVHSL 305
LFNE+ + +L SWNA+I + ++A LF EM +++ ++ + V L
Sbjct: 252 ARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKL 311
Query: 306 LCAC-IGRLTLYQGMQVHSYIIKMGFDSNV---------------PVC-NAILTMYAKCS 348
L A I L Y+ + + +I S VC N+++T YA C
Sbjct: 312 LQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCG 371
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI----------- 397
AL +F+E+ D VSWN++IAA Q Q ++ +F+ M +
Sbjct: 372 RTDEALRLFQEM-VCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYV 430
Query: 398 --------------------KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
KPD T + A A +A+L + QLH KTG D+F
Sbjct: 431 QNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLF 490
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
V N ++ +Y K G + A +F ++N DVVSW+SLI GYA GCG EA++LF M G
Sbjct: 491 VKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRG 550
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
+ P+ VT G+L+AC+H G V++GL+L++ M Y I P EH +CV++LL R G + EA
Sbjct: 551 IIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEA 610
Query: 558 EDFINQMACDADIVVWKSLL 577
+ + M + +W +LL
Sbjct: 611 VEIVQGMKTVSSAKIWGALL 630
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 122/530 (23%), Positives = 211/530 (39%), Gaps = 128/530 (24%)
Query: 166 EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHF 225
E GS++ QN I+ + RI +A VF + +++ ++ SMI+A++K G A F
Sbjct: 10 EKGSYVFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELF 69
Query: 226 NEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASW------------------ 267
+ M N I G + + A LF+ + D+ SW
Sbjct: 70 DLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARE 129
Query: 268 --------------NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
NALIAG A EA LF EM L+ + ++ +S+L
Sbjct: 130 LFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEM----LVKNVVSWNSILSGYTKNG 185
Query: 314 TLYQGMQ----------------VHSYIIKMGFDS------NVPVCNAI-----LTMYAK 346
+ G+Q V Y+ DS +P N + L+ +A
Sbjct: 186 KMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAH 245
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
+ A +F E+ + VSWN++I A ++ NQ ++ ++LF M + D +++
Sbjct: 246 YGRMTEARNLFNEM-PTKNLVSWNAMIGAYVRENQIDDAYKLFMEM----PEKDSVSWTA 300
Query: 407 VMGACAKMASL-----------------------------------EMVTQL-------- 423
++ ++ L E+ +Q+
Sbjct: 301 MINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCW 360
Query: 424 --------HCYITKTGLAF-------DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
HC T L D+ N ++ Y + G + A ++FN M+ +VV
Sbjct: 361 NSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVV 420
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
SW+SLI GY Q G EAL F M+ G P+ T+V L A +++ + G+ L+ +
Sbjct: 421 SWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLT 480
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ G + ++ + A++G V EAE+ ++ + D+V W SL+A
Sbjct: 481 I-KTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIK-NKDVVSWNSLIA 528
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 195/485 (40%), Gaps = 129/485 (26%)
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
P+VV +L+ + G + +AR F++MP +N+VSW AMI + Q +DA KL+++M
Sbjct: 231 PNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEM 290
Query: 128 LQ------SGVMPGQFTFGSIIKACSGLG------------------------------- 150
+ + ++ G G +++A L
Sbjct: 291 PEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFS 350
Query: 151 ------SVCLGRQL--HAHVIKSEHGSHL---------IAQNALIAMYTKFDRILDARNV 193
SVC + +AH +++ L ++ N +IA Y + ++ A +
Sbjct: 351 QISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEM 410
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE--------------- 238
F+ + ++V SW S+I + + G EAL F M G +P++
Sbjct: 411 FNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGE-KPDQTTIVCCLRASANLAA 469
Query: 239 --------------------FIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAG 273
F+ ++ + + R+ +F EI + D+ SWN+LIAG
Sbjct: 470 LNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAG 529
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC------IGRLTLYQGMQVHSYIIK 327
A + EA+ LF M R ++PD +T LL AC L L++ M +Y IK
Sbjct: 530 YALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSM-TETYSIK 588
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC-LQHN------ 380
S C ++ + + L A+ + + + + + W +++ AC + HN
Sbjct: 589 P--QSEHYAC--VINLLGRVGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKY 644
Query: 381 QAEEL----------FRLFSRMLASQIKPDHITFNDVMGACAKMAS------LEMVTQLH 424
AE L + L S M A + D + V+ K +E+ QLH
Sbjct: 645 SAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEKQPGCSWIEIDNQLH 704
Query: 425 CYITK 429
C+++K
Sbjct: 705 CFLSK 709
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + LY EAL + + + +T + A ++L +L +G ++H +
Sbjct: 423 NSLITGYVQNGLYFEALNCFILMKQQGE-KPDQTTIVCCLRASANLAALNVGVQLHHLTI 481
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D+ ++N IL MY K G + +A F ++ ++VVSW ++IAG + N +A++
Sbjct: 482 KTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNGCGKEAVE 541
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL-----HAHVIK--SEHGSHLIAQN 175
L+ M G++P + TF ++ AC+ G V G L + IK SEH +
Sbjct: 542 LFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYA------ 595
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTS---WGSMIAA 211
+I + + R+ +A + G+ K V+S WG+++ A
Sbjct: 596 CVINLLGRVGRLEEAVEIVQGM--KTVSSAKIWGALLWA 632
>gi|147864471|emb|CAN82639.1| hypothetical protein VITISV_028820 [Vitis vinifera]
Length = 871
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 154/488 (31%), Positives = 254/488 (52%), Gaps = 46/488 (9%)
Query: 107 MIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG-LGSVCLGRQLHAHVIKS 165
+I+G ++ D + L+ +M GV P QFT ++K+CS + +G+ +H ++++
Sbjct: 68 LISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRN 127
Query: 166 EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHF 225
+ N+++ Y K A +F +A KD SW M++++ ++G +++
Sbjct: 128 GVDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVD-- 185
Query: 226 NEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
LF ++ D ASWN +I G+ + A+
Sbjct: 186 -----------------------------LFRQLPGKDAASWNTMIDGLMRNGCERVALE 216
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
L +M + LT L L G Q+H+ ++K+G + V N+++ MY
Sbjct: 217 LLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYC 276
Query: 346 KCSVLCNALLVFKELGKNA--------------DSVSWNSIIAACLQHNQAEELFRLFSR 391
KC + A ++FK L + + +SVSW+S+++ +Q+ E+ + FS
Sbjct: 277 KCGEMEKASVIFKHLPRESSMMNSEESCDDAVVESVSWSSMVSGYVQNGGFEDALKTFSS 336
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M+ SQ++ D T V+ ACA LE+ Q+H YI K G DVF+ + ++D+Y+KCGS
Sbjct: 337 MICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGS 396
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
L A +FN ++ +VV W+S+I G A G G EA++LF M + G++PN V+ VGVLTA
Sbjct: 397 LNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTA 456
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
CSH GL+EEG +R+M YGI P EH +C+VDL RAG ++E ++FI+ A
Sbjct: 457 CSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSS 516
Query: 572 VWKSLLAS 579
VW+S L+S
Sbjct: 517 VWRSFLSS 524
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 121/229 (52%), Gaps = 16/229 (6%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T++ + SSL L LG+++H +L D ++N +++MY KCG +E A + F +
Sbjct: 232 TFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHL 291
Query: 97 PQRNV---------------VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
P+ + VSW++M++G QN DA+K + M+ S V +FT S
Sbjct: 292 PRESSMMNSEESCDDAVVESVSWSSMVSGYVQNGGFEDALKTFSSMICSQVEVDKFTLTS 351
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
++ AC+ G + LGRQ+H ++ K HG + +++I MY K + DA +F+ ++
Sbjct: 352 VVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRN 411
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
V W SMI+ + G EA+ F M++ G PNE F V +ACS+
Sbjct: 412 VVLWTSMISGCALHGQGREAVRLFELMINEG-ITPNEVSFVGVLTACSH 459
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 85/145 (58%), Gaps = 1/145 (0%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VS + + +AL + S + + + T ++SAC+S L+LGR+VH +I
Sbjct: 318 VSGYVQNGGFEDALKTFS-SMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIG 376
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
DV L + I++MY KCGSL DA + F++ RNVV WT+MI+GC+ + Q +A++L+
Sbjct: 377 HGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFE 436
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLG 150
M+ G+ P + +F ++ ACS G
Sbjct: 437 LMINEGITPNEVSFVGVLTACSHAG 461
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 170/435 (39%), Gaps = 89/435 (20%)
Query: 37 TYAGLISACSS-LRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC------------ 83
T + ++ +CSS + ++G+ +H IL + D VL N IL+ Y KC
Sbjct: 99 TLSIVLKSCSSNVNDSRIGKGIHGWILRNGVDLDAVLNNSILDYYVKCRCFGYAEKLFGL 158
Query: 84 -------------------GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
G ++ + F ++P ++ SW MI G +N E A++L
Sbjct: 159 MAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELL 218
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
+M+ +G + TF + S L + LG+Q+H V+K +N+LI MY K
Sbjct: 219 YKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKC 278
Query: 185 DRILDARNVFSGIARK---------------DVTSWGSMIAAFSKLGYELEALCHFNEML 229
+ A +F + R+ + SW SM++ + + G +AL F+ M+
Sbjct: 279 GEMEKASVIFKHLPRESSMMNSEESCDDAVVESVSWSSMVSGYVQNGGFEDALKTFSSMI 338
Query: 230 HHGAYQPNEFIFGSVFSACS---------------------------------------- 249
+ ++F SV SAC+
Sbjct: 339 -CSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSL 397
Query: 250 NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
N A ++FN+ ++ W ++I+G A H EA+ LF M + + P+ ++ +L AC
Sbjct: 398 NDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTAC 457
Query: 310 IGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS 368
L +G + + ++ G ++ +Y + L + S
Sbjct: 458 SHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSV 517
Query: 369 WNSIIAACLQHNQAE 383
W S +++C H E
Sbjct: 518 WRSFLSSCRVHKNIE 532
>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 694
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 169/556 (30%), Positives = 261/556 (46%), Gaps = 58/556 (10%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N +L Y G L AR FD++P + SW +++A DA +L M G+
Sbjct: 30 NQLLTAYSATG-LAAARRVFDEIPHPDAASWNSLLAAHVAAGAHRDAWRLLRAMHARGLA 88
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
F GS +++ + LG QL + ++ ++ +AL+ +Y K R+ DAR V
Sbjct: 89 ASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDARRV 148
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG----------- 242
F G+ +++ SW ++IA ++ EA+ F EM G+ P+ F
Sbjct: 149 FDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSV-PDGTTFAVLLATIAGPRW 207
Query: 243 ---------------------------SVFSACSNFA--RILFNEIDSPDLASWNALIAG 273
+ +S C A R +F+ I+S DL SWN+++
Sbjct: 208 YSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIFDGIESRDLISWNSMLGA 267
Query: 274 VASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGR-LTLYQGMQVHSYIIKMGFD 331
A H +EAM F M R+ + PD + S + C QG +HS +IK G +
Sbjct: 268 YAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQQGRSIHSLVIKFGLE 327
Query: 332 SNVPVCNAILTMYAKCS--------VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
PVCNA++ MY + + C + LVFK D+VSWNS++ H +
Sbjct: 328 GVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFK------DAVSWNSMLTGYSHHGLSS 381
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
+ + F M A I+ D + + +C+ +A L + Q+H + ++G A + FV + L+
Sbjct: 382 DALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLI 441
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
+Y KCG LG ARK F + V W+S++ GYAQ G LF M L V + V
Sbjct: 442 FMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYAQHGQAQTVTDLFNEMLDLEVPLDHV 501
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
T V ++TA SH GLV+EG + ME Y I EH +C VDL RAG + +A++ I
Sbjct: 502 TFVALITAYSHGGLVDEGSEILNTMETRYKIPMRMEHYACGVDLYGRAGQLDKAKELIES 561
Query: 564 MACDADIVVWKSLLAS 579
M D +VW +LL +
Sbjct: 562 MPFQPDAIVWMTLLGA 577
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 177/397 (44%), Gaps = 53/397 (13%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T+A L++ + R L R++H I+ +V N + Y +C +L D+R FD
Sbjct: 193 TTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIFDG 252
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLG-SVC 153
+ R+++SW +M+ + + +++A++ +++M+ +SG+ P ++F S I CS G
Sbjct: 253 IESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQ 312
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR---ILDARNVFSGIARKDVTSWGSMIA 210
GR +H+ VIK NA+IAMYT+F + DA N FS + KD SW SM+
Sbjct: 313 QGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFKDAVSWNSMLT 372
Query: 211 AFSKLGYELEALCHF----------------------------------NEMLHHGAYQP 236
+S G +AL F + ++ +
Sbjct: 373 GYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFAS 432
Query: 237 NEFIFGSV---FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
N+F+ S+ +S C AR F E D WN+++ G A H A LF+EM
Sbjct: 433 NDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYAQHGQAQTVTDLFNEML 492
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQV-----HSYIIKMGFDSNVPVCNAILTMYAK 346
D E+ D +T +L+ A + +G ++ Y I M + C + +Y +
Sbjct: 493 DLEVPLDHVTFVALITAYSHGGLVDEGSEILNTMETRYKIPMRMEHYA--CG--VDLYGR 548
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A + + + D++ W +++ AC H E
Sbjct: 549 AGQLDKAKELIESMPFQPDAIVWMTLLGACRIHGNME 585
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
NIR + + +CS L L+LGR+VH ++ S + + + ++ MY KCG L DA
Sbjct: 394 NIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLIFMYSKCGVLGDA 453
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R F++ + + V W +M+ G +Q+ Q L+ +ML V TF ++I A S
Sbjct: 454 RKSFEEADKSSSVPWNSMMFGYAQHGQAQTVTDLFNEMLDLEVPLDHVTFVALITAYSHG 513
Query: 150 GSVCLGRQL 158
G V G ++
Sbjct: 514 GLVDEGSEI 522
>gi|297605857|ref|NP_001057684.2| Os06g0493800 [Oryza sativa Japonica Group]
gi|255677066|dbj|BAF19598.2| Os06g0493800 [Oryza sativa Japonica Group]
Length = 721
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 173/570 (30%), Positives = 275/570 (48%), Gaps = 48/570 (8%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
R VH + C L N++L Y G L DAR FD+MP+RNVVSW+ +IA S+
Sbjct: 22 RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRL 81
Query: 115 YQENDAIKLYIQMLQSGVM--PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
DA+ L+ ML+ G P FT +++ C+ G Q+HA +K
Sbjct: 82 GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF---SKLGYELEALCHFNEML 229
L+ MY K R+ + F ++ V SW SMIA GY A+ F +ML
Sbjct: 142 VAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKML 201
Query: 230 HHGAYQPNE--------FIFGSVFSACSNFARILFN---EIDSP---------------- 262
+ N F + + L E+D
Sbjct: 202 VLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMD 261
Query: 263 -----------DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL--CAC 309
D S +L+ A + EA+ +F +M + D + SLL C+
Sbjct: 262 EITRLACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSS 321
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSW 369
+G+L + + ++H Y +K F + + NAI+T+Y KC + ++ +VF L +N D++SW
Sbjct: 322 LGQLRVVK--EIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTL-ENKDTISW 378
Query: 370 NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
+++ +Q++ ++E F M+ ++ V+ AC+ +SL Q+H + K
Sbjct: 379 TALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVK 438
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
G+ D V N L+ +Y KCG + A K+FN M N ++SW++LI ++Q G A++L
Sbjct: 439 LGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQL 498
Query: 490 FTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLA 549
F M+ V P+ T VG+L++CS +GLV EG ++ M+ +Y + P EH +C+VDL A
Sbjct: 499 FDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFA 558
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLLAS 579
RAG +A FI+ M C D +VW++LLAS
Sbjct: 559 RAGRFSDAMKFIDAMPCQPDQLVWEALLAS 588
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 141/526 (26%), Positives = 236/526 (44%), Gaps = 61/526 (11%)
Query: 32 RIRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
R RP+++ A L++ C+ + G +VH + D + +++MY KCG + +
Sbjct: 100 RDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSS 159
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQE----NDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
F PQR+V+SWT+MIA C N+ + + AI L+ +ML V P TF I+K
Sbjct: 160 WRAFVLTPQRSVLSWTSMIA-CLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKV 218
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
+ G+Q+H ++K AL+AMY + +D + R D S
Sbjct: 219 FDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGG-MDEITRLACRIRHDAFSR 277
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------- 249
S++ A+++ G +EA+ F +ML G ++ S+ CS
Sbjct: 278 TSLLTAYARNGCNMEAVRVFRDMLM-GHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYAL 336
Query: 250 -NFAR-----------------------ILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
NF R I+FN +++ D SW AL+ + + EA+
Sbjct: 337 KNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALF 396
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
F EM + L + S+L AC +L G Q+HS ++K+G D + V NA++TMYA
Sbjct: 397 FFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYA 456
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
KC V+ AL +F + +N +SWN++I + QH +LF M + PD TF
Sbjct: 457 KCGVVQVALKIFNSM-RNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFV 515
Query: 406 DVMGACAKMASL----EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
++ +C++M + E Q+ TK L + ++D++ + G A K +
Sbjct: 516 GLLSSCSRMGLVAEGCEYFKQMK---TKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDA 572
Query: 462 ME-NPDVVSWSSLILG---YAQFGCGDEALKLFTRMRSLGVSPNLV 503
M PD + W +L+ + G A K ++ SP ++
Sbjct: 573 MPCQPDQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYII 618
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 169/354 (47%), Gaps = 20/354 (5%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
I S L+ CSSL L++ +++H + L + + D +L N I+ +YGKCG + + +
Sbjct: 307 IDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIV 366
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F+ + ++ +SWTA++ QN +A+ + +M++ G+ F S+++ACS S+
Sbjct: 367 FNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSL 426
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G Q+H+ V+K +NAL+ MY K + A +F+ + + + SW ++I +F
Sbjct: 427 SCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSF 486
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS-----P 262
S+ G E+ A+ F +M+ P+++ F + S+CS + F ++ + P
Sbjct: 487 SQHGNEVAAIQLF-DMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEP 545
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+ + ++ A ++AM M PD L +LL +C L G
Sbjct: 546 KMEHYTCMVDLFARAGRFSDAMKFIDAM---PCQPDQLVWEALLASCRVHGNLDLGRMAA 602
Query: 323 SYIIKMGFDSNVPV-----CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
I+++ + P +A + M+ + LL F++L K+ S +S
Sbjct: 603 KKILEIKPEDPSPYIILSSIHASIDMWDE-KARNRTLLDFQQLRKDVGSSQLDS 655
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 145/441 (32%), Positives = 237/441 (53%), Gaps = 32/441 (7%)
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
F ++++C S+ LG+QLH+ +I S S N L+ +Y+K ++ A +F +
Sbjct: 55 FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE 258
RK++ S +I +G ++ +++ AR +F+E
Sbjct: 115 RKNIMSCNILI---------------------NGYFRSGDWVT----------ARKMFDE 143
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ ++A+WNA++AG+ E + LFS M + LPD + S+L C G L G
Sbjct: 144 MPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAG 203
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
QVH Y+ K GF+ N+ V +++ MY KC L + + + + + V+WN++IA Q
Sbjct: 204 RQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAM-PSQNVVAWNTLIAGRAQ 262
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+ EE+ ++ M + +PD ITF V+ +C+++A+L Q+H + K G + V V
Sbjct: 263 NGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSV 322
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
++ L+ +Y +CG L + K+F EN DVV WSS+I Y G G EA+ LF +M +
Sbjct: 323 ISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKL 382
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAE 558
N VT + +L ACSH GL E+G+ + +M +YG+ P EH +C+VDLL R G V EAE
Sbjct: 383 EANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAE 442
Query: 559 DFINQMACDADIVVWKSLLAS 579
I M AD++ WK+LL++
Sbjct: 443 ALIRSMPVKADVITWKTLLSA 463
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 221/479 (46%), Gaps = 85/479 (17%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
NL ++ + F + +++I PS ++ L+ +C S SL LG+++H I+ S C D +
Sbjct: 30 NLCSKGHLKQAFDRFSSHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFI 89
Query: 73 QNHILNMYGKCGSLEDA-------------------------------RMGFDKMPQRNV 101
NH+LN+Y KCG L+ A R FD+MP+RNV
Sbjct: 90 SNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNV 149
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
+W AM+AG Q + + L+ +M + G +P +F GS+++ C+GL ++ GRQ+H +
Sbjct: 150 ATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGY 209
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
V K +L+ ++L MY K + + + + ++V +W ++IA ++ GY E
Sbjct: 210 VRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEV 269
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------------------------- 254
L +N M+ ++P++ F SV S+CS A +
Sbjct: 270 LDQYN-MMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLIS 328
Query: 255 -------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
+F E ++ D+ W+++IA H EA+ LF++M +L + +T
Sbjct: 329 MYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVT 388
Query: 302 VHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
SLL AC +G++ ++ K G + ++ + + + A + + +
Sbjct: 389 FLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSM 448
Query: 361 GKNADSVSWNSIIAACLQHNQ-------AEELFRLFSR-----MLASQIKPDHITFNDV 407
AD ++W ++++AC H + +EE+FRL R +L S I ++DV
Sbjct: 449 PVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDV 507
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 40/228 (17%)
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
L + F R +S I + F+ ++ +C SL + QLH I +G + D F+ N L++
Sbjct: 37 LKQAFDR-FSSHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLN 95
Query: 445 IYIKCGSLG-------------------------------SARKLFNFMENPDVVSWSSL 473
+Y KCG L +ARK+F+ M +V +W+++
Sbjct: 96 LYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAM 155
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN--- 530
+ G QF +E L LF+RM LG P+ L VL C+ + + G ++ +
Sbjct: 156 VAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGF 215
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
E+ ++ S + + + G + E E I M ++V W +L+A
Sbjct: 216 EFNLVVV----SSLAHMYMKCGSLGEGERLIRAMP-SQNVVAWNTLIA 258
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 162/552 (29%), Positives = 272/552 (49%), Gaps = 45/552 (8%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+ TY+ ++ C+ L+S G+KVH I + D L +++ Y CG L++ R
Sbjct: 96 ELETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRR 155
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV--MPGQFTFGSIIKACSGL 149
FD M ++NV W M++ ++ ++I L+ M++ G+ + F K C
Sbjct: 156 VFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCD-R 214
Query: 150 GSVCLGRQLHAHVIK--SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
+ + +V +E G + Q + + I+ +V G A S G
Sbjct: 215 DVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATII---SVLVGCANSGTLSLGK 271
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--ARILFNEIDSPDLA 265
+ + + + E +F+ L ++S C + A +F ++ ++
Sbjct: 272 AVHSLA-IKSSFERRINFSNTLL------------DMYSKCGDLDGALRVFEKMGERNVV 318
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW ++IAG ++ A+ L +M + D + + S+L AC +L G VH YI
Sbjct: 319 SWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 378
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
+SN+ VCNA++ MYAKC + A VF + D +SWN++I
Sbjct: 379 KANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVK-DIISWNTMIG----------- 426
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
++KPD T V+ ACA +++LE ++H YI + G + D V N L+D+
Sbjct: 427 ----------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDL 476
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y+KCG LG AR LF+ + + D+VSW+ +I GY G G+EA+ F MR G+ P+ V+
Sbjct: 477 YVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 536
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
+ +L ACSH GL+E+G + IM+N++ I P EH +C+VDLL+R G + +A +FI +
Sbjct: 537 ISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLP 596
Query: 566 CDADIVVWKSLL 577
D +W +LL
Sbjct: 597 IAPDATIWGALL 608
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 220/445 (49%), Gaps = 43/445 (9%)
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
T+ S+++ C+GL S G+++H+ + + G L++ Y + + R VF +
Sbjct: 101 TYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG--AYQPNEFIFGSVFSACSNFARIL 255
+K+V W M++ ++K+G E++C F M+ G +P S F L
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPE-----SAFE--------L 207
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F+++ D+ SWN++I+G S+ + ++ +M + D T+ S+L C TL
Sbjct: 208 FDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTL 267
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
G VHS IK F+ + N +L MY+KC L AL VF+++G+ + VSW S+IA
Sbjct: 268 SLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER-NVVSWTSMIAG 326
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
+ +++ +L +M +K D + ++ ACA+ SL+ +H YI + +
Sbjct: 327 YTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESN 386
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
+FV N LMD+Y KCGS+ +A +F+ M D++SW+++I G+
Sbjct: 387 LFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI--------GE----------- 427
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
+ P+ T+ VL AC+ + +E G +H Y I+ N Y R + +VDL + G
Sbjct: 428 --LKPDSRTMACVLPACASLSALERGKEIHGY-ILRNGYS--SDRHVANALVDLYVKCGV 482
Query: 554 VHEAEDFINQMACDADIVVWKSLLA 578
+ A + M D+V W ++A
Sbjct: 483 LGLAR-LLFDMIPSKDLVSWTVMIA 506
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 209/425 (49%), Gaps = 28/425 (6%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I + +T ++ C++ +L LG+ VH + S + + N +L+MY KCG L+ A
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F+KM +RNVVSWT+MIAG +++ + + AIKL QM + GV SI+ AC+ G
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSG 366
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
S+ G+ +H ++ + S+L NAL+ MY K + A +VFS + KD+ SW +MI
Sbjct: 367 SLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG 426
Query: 211 AFSKLGY----------ELEALCHFNEMLHHG-----AYQPNEFIFGS---VFSACS--N 250
L AL E+ HG Y + + + ++ C
Sbjct: 427 ELKPDSRTMACVLPACASLSALERGKEI--HGYILRNGYSSDRHVANALVDLYVKCGVLG 484
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
AR+LF+ I S DL SW +IAG H NEA++ F+EMRD + PD ++ S+L AC
Sbjct: 485 LARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 544
Query: 311 GRLTLYQGMQVHSYIIKMGF--DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS 368
L QG + YI+K F + + ++ + ++ L A + L D+
Sbjct: 545 HSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATI 603
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC-AKMASLEMVTQLHCYI 427
W +++ C ++ E ++ R+ +++P++ + ++ A+ E V +L I
Sbjct: 604 WGALLCGCRNYHDIELAEKVAERVF--ELEPENSGYYVLLANIYAEAEKWEEVKRLREKI 661
Query: 428 TKTGL 432
K GL
Sbjct: 662 GKQGL 666
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 169/393 (43%), Gaps = 61/393 (15%)
Query: 240 IFGSVFSACSNFARILFNEIDSPD--LASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
IF +FS+C RI + D + +NA I + AM L + EL
Sbjct: 41 IFSPIFSSCIPI-RISATPTRTIDHQVTDYNAKILHFCQLGDLENAMELICMCKKSEL-- 97
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYI------------------------IKMG---F 330
+ T S+L C G + G +VHS I +K G F
Sbjct: 98 ETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVF 157
Query: 331 DS----NVPVCNAILTMYAKCSVLCNALLVFKEL------GKNADS-------------V 367
D+ NV + N +++ YAK ++ +FK + GK +S +
Sbjct: 158 DTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVI 217
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
SWNS+I+ + + E ++ +M+ I D T V+ CA +L + +H
Sbjct: 218 SWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLA 277
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K+ + N L+D+Y KCG L A ++F M +VVSW+S+I GY + G D A+
Sbjct: 278 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAI 337
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVV 545
KL +M GV ++V + +L AC+ G ++ G +H Y N + C+ ++
Sbjct: 338 KLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFV---CNALM 394
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
D+ A+ G + A + M DI+ W +++
Sbjct: 395 DMYAKCGSMEAANSVFSTMVV-KDIISWNTMIG 426
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 166/565 (29%), Positives = 275/565 (48%), Gaps = 42/565 (7%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ 113
G ++H L DV N ++ Y CG DAR FD+MP+R+VVSW ++++
Sbjct: 138 GLELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLV 197
Query: 114 NYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA 173
N +DA + + M++SG + S++ AC G +HA +K + +
Sbjct: 198 NGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNL 257
Query: 174 QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG- 232
NAL+ MY KF + + VF G+ ++ SW S I F G+ + L F +M H
Sbjct: 258 ANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNV 317
Query: 233 ---------------------------------AYQPNEFIFGSVFSACSNF-----ARI 254
A + F+ S+ + F A
Sbjct: 318 MPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKAST 377
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+F ++ ++ SWNA+IA + + EA L ++M+ P+ +T+ ++L AC +
Sbjct: 378 IFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMAS 437
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
L G Q+H++ I+ G ++ + NA++ MY+KC L A +F+ K D VS+N++I
Sbjct: 438 LKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERSEK--DDVSYNTLIL 495
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
Q E LF +M + I D ++F + AC ++ + ++HC + + L+
Sbjct: 496 GYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSG 555
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
F+ N L+D+Y K G L +A K+FN + DV SW+++ILGY G D A +LF M+
Sbjct: 556 HPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMK 615
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCV 554
G+ + V+ + VL ACSH GLV++G + M + I P + H +C+VDLL RAG +
Sbjct: 616 GDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQL 674
Query: 555 HEAEDFINQMACDADIVVWKSLLAS 579
+ + I M A+ VW +LL +
Sbjct: 675 SKCAEIIRDMPFPANSDVWGALLGA 699
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 188/419 (44%), Gaps = 58/419 (13%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T + L+ A L S LGR+VH + + D+ + N +++MY K GSLE A F++M
Sbjct: 323 TLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQM 382
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
RNVVSW AMIA QN E +A +L M +SG P T +++ AC+ + S+ +G+
Sbjct: 383 KDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGK 442
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+HA I+ L NALI MY+K ++ ARN+F + KD S+ ++I +S+
Sbjct: 443 QIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQSP 501
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+ E+L F +M G + F SAC+N
Sbjct: 502 WCFESLLLFKQMRSVG-IDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLS 560
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A +FN+I D+ASWN +I G H + A LF M+ L
Sbjct: 561 NSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLD 620
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
D ++ ++L AC + +G + S ++ + ++ + + L +
Sbjct: 621 YDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEI 680
Query: 357 FKELGKNADSVSWNSIIAACLQHNQ-------AEELFRLFSRMLASQIKPDHITFNDVM 408
+++ A+S W +++ AC H AE LF ++KP+H + +M
Sbjct: 681 IRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLF---------ELKPEHSGYYTLM 730
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 156/320 (48%), Gaps = 15/320 (4%)
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ--GMQVHSY 324
WN+L ++S S +EA+ +++ M + PD T L A + + G+++H+
Sbjct: 85 WNSLSRALSSASLPSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHAS 144
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
++ G ++V N ++ YA C C+A VF E+ + D VSWNS+++A L + +
Sbjct: 145 ALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPER-DVVSWNSLVSAFLVNGMFHD 203
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
R M+ S + + V+ AC + +H K GL V + N L+D
Sbjct: 204 ARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVD 263
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y K G + ++ ++F+ M + VSW+S I + G + L++F +M V P +T
Sbjct: 264 MYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSIT 323
Query: 505 LVGVLTACSHVGLVEEG--LHLY---RIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
L +L A +G + G +H Y R M+ + + + +VD+ A+ G + +A
Sbjct: 324 LSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFV------ANSLVDMYAKFGSLEKAST 377
Query: 560 FINQMACDADIVVWKSLLAS 579
QM D ++V W +++A+
Sbjct: 378 IFEQMK-DRNVVSWNAMIAN 396
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 5/247 (2%)
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS-WNSIIAACLQHNQAEELFRLFS 390
+++P+ A+L YA S L +A LV + S WNS+ A + E R+++
Sbjct: 47 TSLPLAGALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRALSSASLPSEALRVYN 106
Query: 391 RMLASQIKPDHITF--NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
ML S ++PD TF A A ++ + +LH + G DVF N L+ Y
Sbjct: 107 LMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLADVFTGNTLVAFYAA 166
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
CG AR++F+ M DVVSW+SL+ + G +A + M G N+ +LV V
Sbjct: 167 CGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSV 226
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDA 568
+ AC + GL ++ + + G+ + +VD+ + G V + + M +
Sbjct: 227 VPACGTEQEEKFGLSIH-ALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGM-LEQ 284
Query: 569 DIVVWKS 575
+ V W S
Sbjct: 285 NEVSWNS 291
>gi|15233292|ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22150, chloroplastic; Flags: Precursor
gi|11994734|dbj|BAB03063.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|110739449|dbj|BAF01634.1| hypothetical protein [Arabidopsis thaliana]
gi|332643073|gb|AEE76594.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 820
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 165/618 (26%), Positives = 302/618 (48%), Gaps = 52/618 (8%)
Query: 13 NLYNEALVAYDFSQNNTNI-RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
NL +EAL+ Y + TY+ + AC+ ++L+ G+ VH H++ V
Sbjct: 84 NLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRV 143
Query: 72 LQNHILNMYGKCGSLED------ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ N ++NMY C + D R FD M ++NVV+W +I+ + + +A + +
Sbjct: 144 VHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFG 203
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK--SEHGSHLIAQNALIAMYTK 183
M++ V P +F ++ A S S+ + ++K E+ L ++ I+MY +
Sbjct: 204 IMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAE 263
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
I +R VF +++ W +MI + + +E++ F E + +E +
Sbjct: 264 LGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLL 323
Query: 244 VFSACS-----------------NFARI-----------------------LFNEIDSPD 263
SA S NF + +F + D
Sbjct: 324 AASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERD 383
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+ SWN +I+ + +E + L EM+ + D +TV +LL A G Q H+
Sbjct: 384 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHA 443
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQHNQA 382
++I+ G + + ++ MY+K ++ + +F+ G D +WNS+I+ Q+
Sbjct: 444 FLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHT 502
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
E+ F +F +ML I+P+ +T ++ AC+++ S+++ QLH + + L +VFV + L
Sbjct: 503 EKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASAL 562
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y K G++ A +F+ + + V+++++ILGY Q G G+ A+ LF M+ G+ P+
Sbjct: 563 VDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDA 622
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
+T V VL+ACS+ GL++EGL ++ M Y I P+ EH C+ D+L R G V+EA +F+
Sbjct: 623 ITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVK 682
Query: 563 QMACDADIV-VWKSLLAS 579
+ + +I +W SLL S
Sbjct: 683 GLGEEGNIAELWGSLLGS 700
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/539 (25%), Positives = 252/539 (46%), Gaps = 69/539 (12%)
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG--QFTFGS 141
G+ + AR FD +P+ V W +I G N ++A+ Y +M ++ +T+ S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT---------KFDRILDARN 192
+KAC+ ++ G+ +H H+I+ S + N+L+ MY ++D + R
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVV---RK 169
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--- 249
VF + RK+V +W ++I+ + K G EA F M+ +P+ F +VF A S
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRM-EVKPSPVSFVNVFPAVSISR 228
Query: 250 ---------------------------------------NFARILFNEIDSPDLASWNAL 270
+R +F+ ++ WN +
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 271 IAGVASHSNANEAMSLFSE-MRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKM 328
I + E++ LF E + +E++ D +T + L + + L + G Q H ++ K
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVT-YLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
+ + + N+++ MY++C + + VF + + D VSWN++I+A +Q+ +E L
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSM-RERDVVSWNTMISAFVQNGLDDEGLML 406
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG-LMDIYI 447
M K D+IT ++ A + + + E+ Q H ++ + G+ F+ MN L+D+Y
Sbjct: 407 VYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE--GMNSYLIDMYS 464
Query: 448 KCGSLGSARKLFN---FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
K G + ++KLF + E D +W+S+I GY Q G ++ +F +M + PN VT
Sbjct: 465 KSGLIRISQKLFEGSGYAER-DQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVT 523
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
+ +L ACS +G V+ G L+ +Y + S +VD+ ++AG + AED +Q
Sbjct: 524 VASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFSQ 581
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 166/339 (48%), Gaps = 12/339 (3%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP--DGLTVHSLLCA 308
AR LF+ I P WN +I G ++ +EA+ +S M+ D T S L A
Sbjct: 57 LARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKA 116
Query: 309 CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC--SVLCNALLVFKELGKN--- 363
C L G VH ++I+ +S+ V N+++ MY C + C V +++ N
Sbjct: 117 CAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRR 176
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
+ V+WN++I+ ++ + E R F M+ ++KP ++F +V A + S++
Sbjct: 177 KNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVF 236
Query: 424 HCYITKTGLAF--DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
+ + K G + D+FV++ + +Y + G + S+R++F+ ++ W+++I Y Q
Sbjct: 237 YGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQND 296
Query: 482 CGDEALKLFTR-MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
C E+++LF + S + + VT + +A S + VE G + + + +P
Sbjct: 297 CLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIV 356
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
S +V + +R G VH++ M + D+V W +++++
Sbjct: 357 NSLMV-MYSRCGSVHKSFGVFLSMR-ERDVVSWNTMISA 393
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
NIR T A ++ ACS + S+ LG+++H + +V + + +++MY K G+++ A
Sbjct: 516 NIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYA 575
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F + +RN V++T MI G Q+ AI L++ M +SG+ P TF +++ ACS
Sbjct: 576 EDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYS 635
Query: 150 GSVCLG-------RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
G + G R+++ SEH + M + R+ +A G+ +
Sbjct: 636 GLIDEGLKIFEEMREVYNIQPSSEHYC------CITDMLGRVGRVNEAYEFVKGLGEEGN 689
Query: 203 TS--WGSMIAAFSKLGYELEALCHFNEML 229
+ WGS++ + KL ELE +E L
Sbjct: 690 IAELWGSLLGS-CKLHGELELAETVSERL 717
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 163/557 (29%), Positives = 278/557 (49%), Gaps = 51/557 (9%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
+ + +S+ S R +H H + N++L +Y K +L+ A FD++ +N
Sbjct: 38 FLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKN 97
Query: 101 VVSWTAMIAGCSQNYQENDAI-KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
+WT +I+G ++ ++ + L+ +M G P Q+T S++K CS ++ G+ +H
Sbjct: 98 TQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIH 157
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
A ++++ G ++ +N+++ +Y K A + F + KDV SW MI A+ + G
Sbjct: 158 AWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVE 217
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSN 279
++L F PN+ D+ SWN +I G+
Sbjct: 218 KSLEMFRNF-------PNK------------------------DVVSWNTIIDGLIQCGY 246
Query: 280 ANEAMSLFSEM--RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
A+ M E P ++ +L + + + + G Q+H ++ G +S+ +
Sbjct: 247 ERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEV--GRQLHGRVLTFGLNSDGYIR 304
Query: 338 NAILTMYAKCSVLCNALLVFKELGKN---------------ADSVSWNSIIAACLQHNQA 382
++++ MY KC + A + K++ N A VSW+S+++ + + +
Sbjct: 305 SSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKY 364
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
E+ + F M+ I D T ++ ACA LE Q+H YI K GL D +V + L
Sbjct: 365 EDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSL 424
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y K GSL A +F ++ P+VV W+S+I G A G G EA+ LF M +LG+ PN
Sbjct: 425 IDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNE 484
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
VT VGVL ACSHVGL+EEG +R+M++ Y I P EH + +V+L RAG + EA++FI
Sbjct: 485 VTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIF 544
Query: 563 QMACDADIVVWKSLLAS 579
+ + VW+S L+S
Sbjct: 545 ENSISHFTSVWRSFLSS 561
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 118/236 (50%), Gaps = 17/236 (7%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS-------LE 87
P T++ + SSL +++GR++H +L D +++ ++ MYGKCG L+
Sbjct: 266 PVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILK 325
Query: 88 DARMGFD---------KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
D + F K P+ +VSW++M++G N + D +K + M+ ++ T
Sbjct: 326 DVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRT 385
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
+II AC+ G + G+Q+HA++ K ++LI MY+K + DA +F I
Sbjct: 386 VATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIK 445
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
+V W SMI+ + G EA+ F ML+ G PNE F V +ACS+ I
Sbjct: 446 EPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGII-PNEVTFVGVLNACSHVGLI 500
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 103/177 (58%), Gaps = 2/177 (1%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T A +ISAC++ L+ G+++H +I + D + + +++MY K GSL+DA M F+++
Sbjct: 385 TVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQI 444
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ NVV WT+MI+GC+ + Q +AI L+ ML G++P + TF ++ ACS +G + G
Sbjct: 445 KEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGC 504
Query: 157 QLHAHVIKSEHGSHLIAQ-NALIAMYTKFDRILDARN-VFSGIARKDVTSWGSMIAA 211
+ + + H + + +++ +Y + +++A+N +F + W S +++
Sbjct: 505 RYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSS 561
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 165/436 (37%), Gaps = 97/436 (22%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T + ++ CS ++Q G+ +H IL + DVVL+N IL++Y KC E A F+ M
Sbjct: 136 TLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELM 195
Query: 97 -------------------------------PQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
P ++VVSW +I G Q E A++
Sbjct: 196 IEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLY 255
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M+ G TF + S L V +GRQLH V+ S +++L+ MY K
Sbjct: 256 CMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCG 315
Query: 186 RILDARNVFSGI----------------ARKDVTSWGSMIAAFSKLGYELEALCHFNEM- 228
R+ A + + + + SW SM++ + G + + F M
Sbjct: 316 RMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMV 375
Query: 229 --------------------------------------LHHGAYQPNEFIFGSVFSACSN 250
L AY + I S +
Sbjct: 376 CELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLD 435
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC- 309
A ++F +I P++ W ++I+G A H EA+SLF M + ++P+ +T +L AC
Sbjct: 436 DALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACS 495
Query: 310 ----IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL-LVFKELGKNA 364
I Y M +Y I + V +++ +Y + L A +F+ +
Sbjct: 496 HVGLIEEGCRYFRMMKDTYHI----NPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHF 551
Query: 365 DSVSWNSIIAACLQHN 380
SV W S +++C H
Sbjct: 552 TSV-WRSFLSSCRLHK 566
>gi|296084954|emb|CBI28363.3| unnamed protein product [Vitis vinifera]
Length = 930
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 161/555 (29%), Positives = 277/555 (49%), Gaps = 37/555 (6%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I P +A ++ AC++L G + H +I+ + L+N +++ Y KCG LE R
Sbjct: 218 IEPDAFAFSMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMR 277
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F M ++N+VSW I G N+ +A++++ +++ F+ SI+KA SGLG
Sbjct: 278 RVFSHMSEKNLVSWNTFINGYVHNFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLG 337
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ G+++H +++++ ++ ++L+ MY +D +++ +
Sbjct: 338 HLDHGKEIHGYILRAGIETNRYVVSSLLDMYIG---CIDHESLYPRVE-----------V 383
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFNEIDSPDLA 265
L Y L G Y +EFI S+ CS A+ +F ++ PD A
Sbjct: 384 PLKLLNY-----------LEGGGY--DEFIMTSLLKWCSLESSLETAKRVFTRVEQPDTA 430
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
W+ALI+G + + EA+ LF +M+ + + T S++ AC+ L +G ++H I
Sbjct: 431 PWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVILACLALENLRKGKELHCKI 490
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
++ G++SN V N ++ +Y++ AL + + + +SWN +I ACL E +
Sbjct: 491 LRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIPDS--EISWNFLIRACLGAEDYEII 548
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
+L R+ S D ++ D+ +C+ L + TQ H Y+TK GL + N L+ +
Sbjct: 549 HKLLWRIQVSHGNLDPVSACDIFASCSSPVLLNVGTQAHAYMTKRGLISHPTISNSLIQM 608
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y CG A + FN M D SW+S++ + G EAL L ++MR + T
Sbjct: 609 YSACGKFDEAVQAFNLMPEKDTCSWTSILSARVEHGHPSEALNLISQMRWKNKPADQSTF 668
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
VL AC+ +GLV+E L+ M+ YGI P EH SC+V++L RAG E DFIN +
Sbjct: 669 RSVLNACAQMGLVDEAFRLFFSMKEVYGIEPLEEHYSCMVEVLGRAGMFEEVLDFINGVP 728
Query: 566 C-DADIVVWKSLLAS 579
++W++LL+S
Sbjct: 729 TFKLGPLIWRTLLSS 743
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 159/641 (24%), Positives = 281/641 (43%), Gaps = 105/641 (16%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI----------LNMYGKCG 84
P+T L + +L S L + +HI +K +P + QN I L MY G
Sbjct: 8 PTTPFLLPPSLHNLHSQTLLQLQSNHIAQTKLKP--IPQNEIHARTRLFNLYLRMYVNAG 65
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSG---VMPGQFTFG 140
++++AR FD+MP+R++VSWT +++G +++ ++ + ++ ML SG + P F F
Sbjct: 66 AMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLLRPDSFVFA 125
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
+++AC + + GR +H V+K +NAL++MY + DA VF GI +
Sbjct: 126 VVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVFGGIDKP 185
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA-------- 252
D+ W S+++ + K G E E L F +M+ G +P+ F F V AC+N
Sbjct: 186 DLVGWSSILSGYVKNGLEEEGLRIFCDMV-SGGIEPDAFAFSMVLGACTNLECWDFGTQA 244
Query: 253 --------------------------------RILFNEIDSPDLASWNALIAGVASHSNA 280
R +F+ + +L SWN I G + +
Sbjct: 245 HCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVHNFHY 304
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
EA+ +F + + D ++ S+L A G L G ++H YI++ G ++N V +++
Sbjct: 305 LEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNRYVVSSL 364
Query: 341 LTMYAKC----------------------------------------SVLCNALLVFKEL 360
L MY C S L A VF +
Sbjct: 365 LDMYIGCIDHESLYPRVEVPLKLLNYLEGGGYDEFIMTSLLKWCSLESSLETAKRVFTRV 424
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
+ D+ W+++I+ + E +LF +M IK + TF V+ AC + +L
Sbjct: 425 -EQPDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVILACLALENLRKG 483
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
+LHC I ++G + V+N L+++Y + A KL + + + + +SW+ LI A
Sbjct: 484 KELHCKILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIPDSE-ISWNFLI--RACL 540
Query: 481 GCGDEAL--KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
G D + KL R++ + + V+ + +CS L+ G + M + G+I
Sbjct: 541 GAEDYEIIHKLLWRIQVSHGNLDPVSACDIFASCSSPVLLNVGTQAHAYM-TKRGLISHP 599
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ ++ + + G EA N M + D W S+L++
Sbjct: 600 TISNSLIQMYSACGKFDEAVQAFNLMP-EKDTCSWTSILSA 639
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 116/242 (47%), Gaps = 7/242 (2%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
+ EAL + Q + I+ T+ +I AC +L +L+ G+++H IL S + + + N
Sbjct: 445 FAEALKLFRKMQFD-GIKANEFTFTSVILACLALENLRKGKELHCKILRSGYESNFSVVN 503
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGC--SQNYQENDAIKLYIQMLQSGV 132
++N+Y + + A +P + SW +I C +++Y+ + IQ+ +
Sbjct: 504 TLINLYSELWQHKQALKLCSMIPDSEI-SWNFLIRACLGAEDYEIIHKLLWRIQVSHGNL 562
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
P + I +CS + +G Q HA++ K SH N+LI MY+ + +A
Sbjct: 563 DP--VSACDIFASCSSPVLLNVGTQAHAYMTKRGLISHPTISNSLIQMYSACGKFDEAVQ 620
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA 252
F+ + KD SW S+++A + G+ EAL ++M ++ F SV +AC+
Sbjct: 621 AFNLMPEKDTCSWTSILSARVEHGHPSEALNLISQMRWKNK-PADQSTFRSVLNACAQMG 679
Query: 253 RI 254
+
Sbjct: 680 LV 681
>gi|222622248|gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japonica Group]
Length = 518
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 227/405 (56%), Gaps = 7/405 (1%)
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MYTK + +A VF + + SW +I F + G +A+ ++ ++PNE
Sbjct: 1 MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAV-EVLSLMQEAGFEPNEV 59
Query: 240 IFGSVFSAC-----SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+ ++ ++C + AR +F++I P + +WN L++G + + LF M+ +
Sbjct: 60 TYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQN 119
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ PD T+ +L +C L G QVHS ++ +++ V + ++ MY+KC + A
Sbjct: 120 VQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIAR 179
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F ++ + D V WNSII+ H+ +E F F +M + I P ++ ++ +C+++
Sbjct: 180 SIFNKMTER-DVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRL 238
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+S+ Q+H + K G +V+V + L+D+Y KCG++ AR F+ M ++V+W+ +I
Sbjct: 239 SSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMI 298
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
GYAQ G GD+A++LF M + P+ VT + VLT CSH GLV++ + + MEN YGI
Sbjct: 299 HGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGI 358
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
IP EH +C++D L RAG E E I++M C D ++W+ LLA+
Sbjct: 359 IPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAA 403
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 174/347 (50%), Gaps = 23/347 (6%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MY KC +++A F+ +P +VSW +I G Q A+++ M ++G P + T
Sbjct: 1 MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVT 60
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
+ +++ +C V R + + + + N L++ Y + ++ D +F +
Sbjct: 61 YSNLLASCIKARDVHSARAMFDKISRPS----VTTWNTLLSGYCQEEQHQDTIELFRRMQ 116
Query: 199 RKDV----TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ---PNEFIFGS----VFSA 247
++V T+ ++++ SKLG + F +H + + N+ S ++S
Sbjct: 117 HQNVQPDRTTLAVILSSCSKLG-----ILDFGRQVHSASVRFLLHNDMFVASGLVDMYSK 171
Query: 248 CSN--FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
C AR +FN++ D+ WN++I+G+ HS EA F +MR+ ++P + S+
Sbjct: 172 CGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASM 231
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
+ +C ++ G Q+H+ ++K G+D NV V +A++ MYAKC + +A L F + +
Sbjct: 232 INSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMK-N 290
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
V+WN +I Q+ ++ LF ML ++ KPD +TF V+ C+
Sbjct: 291 IVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCS 337
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 164/318 (51%), Gaps = 15/318 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S C++ + + + + Q+ N++ +T A ++S+CS L L GR+VH +
Sbjct: 93 NTLLSGYCQEEQHQDTIELFRRMQHQ-NVQPDRTTLAVILSSCSKLGILDFGRQVHSASV 151
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
D+ + + +++MY KCG + AR F+KM +R+VV W ++I+G + + +A
Sbjct: 152 RFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFD 211
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ QM ++G+MP + ++ S+I +CS L S+ GRQ+HA V+K + ++ +ALI MY
Sbjct: 212 FFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYA 271
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + DAR F + K++ +W MI +++ G +A+ F ML +P+ F
Sbjct: 272 KCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYML-TTEQKPDAVTFI 330
Query: 243 SVFSACS-----NFARILFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEMRD 292
+V + CS + A FN +++ P + LI + E +L +M
Sbjct: 331 AVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPC 390
Query: 293 RELLPDGLTVHSLLCACI 310
++ D + LL AC+
Sbjct: 391 KD---DPIIWEVLLAACV 405
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 168/382 (43%), Gaps = 73/382 (19%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
+P+ V +++L K + AR FDK+ + +V +W +++G Q Q D I+L+ +
Sbjct: 55 EPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRR 114
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M V P + T I+ +CS LG + GRQ+H+ ++ + + + L+ MY+K +
Sbjct: 115 MQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQ 174
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
I AR++F+ + +DV W S+I+ + EA F +M +G P E + S+ +
Sbjct: 175 IGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENG-IMPTESSYASMIN 233
Query: 247 ACSNF----------------------------------------ARILFNEIDSPDLAS 266
+CS AR+ F+ + ++ +
Sbjct: 234 SCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVA 293
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WN +I G A + ++A+ LF M E PD +T ++L C HS ++
Sbjct: 294 WNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGC-----------SHSGLV 342
Query: 327 K--MGFDSNVPVCNAILTMYAKCSVLCNAL-----------LVFKELGKNADSVSWNSII 373
M F +++ I+ + + L +AL L+ K K+ D + W ++
Sbjct: 343 DKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKD-DPIIWEVLL 401
Query: 374 AACLQHNQ-------AEELFRL 388
AAC+ H+ AE LFR+
Sbjct: 402 AACVVHHNAELGKCAAEHLFRI 423
>gi|125597302|gb|EAZ37082.1| hypothetical protein OsJ_21424 [Oryza sativa Japonica Group]
Length = 671
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 173/570 (30%), Positives = 275/570 (48%), Gaps = 48/570 (8%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
R VH + C L N++L Y G L DAR FD+MP+RNVVSW+ +IA S+
Sbjct: 22 RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRL 81
Query: 115 YQENDAIKLYIQMLQSGVM--PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
DA+ L+ ML+ G P FT +++ C+ G Q+HA +K
Sbjct: 82 GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF---SKLGYELEALCHFNEML 229
L+ MY K R+ + F ++ V SW SMIA GY A+ F +ML
Sbjct: 142 VAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKML 201
Query: 230 HHGAYQPNE--------FIFGSVFSACSNFARILFN---EIDSP---------------- 262
+ N F + + L E+D
Sbjct: 202 VLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMD 261
Query: 263 -----------DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL--CAC 309
D S +L+ A + EA+ +F +M + D + SLL C+
Sbjct: 262 EITRLACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSS 321
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSW 369
+G+L + + ++H Y +K F + + NAI+T+Y KC + ++ +VF L +N D++SW
Sbjct: 322 LGQLRVVK--EIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTL-ENKDTISW 378
Query: 370 NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
+++ +Q++ ++E F M+ ++ V+ AC+ +SL Q+H + K
Sbjct: 379 TALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVK 438
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
G+ D V N L+ +Y KCG + A K+FN M N ++SW++LI ++Q G A++L
Sbjct: 439 LGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQL 498
Query: 490 FTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLA 549
F M+ V P+ T VG+L++CS +GLV EG ++ M+ +Y + P EH +C+VDL A
Sbjct: 499 FDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFA 558
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLLAS 579
RAG +A FI+ M C D +VW++LLAS
Sbjct: 559 RAGRFSDAMKFIDAMPCQPDQLVWEALLAS 588
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 141/526 (26%), Positives = 236/526 (44%), Gaps = 61/526 (11%)
Query: 32 RIRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
R RP+++ A L++ C+ + G +VH + D + +++MY KCG + +
Sbjct: 100 RDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSS 159
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQE----NDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
F PQR+V+SWT+MIA C N+ + + AI L+ +ML V P TF I+K
Sbjct: 160 WRAFVLTPQRSVLSWTSMIA-CLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKV 218
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
+ G+Q+H ++K AL+AMY + +D + R D S
Sbjct: 219 FDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGG-MDEITRLACRIRHDAFSR 277
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------- 249
S++ A+++ G +EA+ F +ML G ++ S+ CS
Sbjct: 278 TSLLTAYARNGCNMEAVRVFRDMLM-GHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYAL 336
Query: 250 -NFAR-----------------------ILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
NF R I+FN +++ D SW AL+ + + EA+
Sbjct: 337 KNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALF 396
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
F EM + L + S+L AC +L G Q+HS ++K+G D + V NA++TMYA
Sbjct: 397 FFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYA 456
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
KC V+ AL +F + +N +SWN++I + QH +LF M + PD TF
Sbjct: 457 KCGVVQVALKIFNSM-RNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFV 515
Query: 406 DVMGACAKMASL----EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
++ +C++M + E Q+ TK L + ++D++ + G A K +
Sbjct: 516 GLLSSCSRMGLVAEGCEYFKQMK---TKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDA 572
Query: 462 ME-NPDVVSWSSLILG---YAQFGCGDEALKLFTRMRSLGVSPNLV 503
M PD + W +L+ + G A K ++ SP ++
Sbjct: 573 MPCQPDQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYII 618
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 169/354 (47%), Gaps = 20/354 (5%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
I S L+ CSSL L++ +++H + L + + D +L N I+ +YGKCG + + +
Sbjct: 307 IDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIV 366
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F+ + ++ +SWTA++ QN +A+ + +M++ G+ F S+++ACS S+
Sbjct: 367 FNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSL 426
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G Q+H+ V+K +NAL+ MY K + A +F+ + + + SW ++I +F
Sbjct: 427 SCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSF 486
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS-----P 262
S+ G E+ A+ F +M+ P+++ F + S+CS + F ++ + P
Sbjct: 487 SQHGNEVAAIQLF-DMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEP 545
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+ + ++ A ++AM M PD L +LL +C L G
Sbjct: 546 KMEHYTCMVDLFARAGRFSDAMKFIDAM---PCQPDQLVWEALLASCRVHGNLDLGRMAA 602
Query: 323 SYIIKMGFDSNVPV-----CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
I+++ + P +A + M+ + LL F++L K+ S +S
Sbjct: 603 KKILEIKPEDPSPYIILSSIHASIDMWDE-KARNRTLLDFQQLRKDVGSSQLDS 655
>gi|255572205|ref|XP_002527042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533604|gb|EEF35342.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 520
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 148/500 (29%), Positives = 259/500 (51%), Gaps = 46/500 (9%)
Query: 108 IAGCSQNYQENDAIKLYIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE 166
+A ++N +A++L+ ++LQ + P FT+ S++KAC GLG GR +H H+IKS
Sbjct: 1 MAAYTKNCMYTEALELFDRLLQYPYLQPDSFTYPSVLKACGGLGRYDYGRMIHTHLIKSG 60
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
++ ++L++++ K + A +F + +DV W ++I+ + + G +AL F
Sbjct: 61 FVFDIVVASSLVSLHAKCNLFGYAIQLFDEMPERDVACWNTVISCYYQDGKAEKALEMFG 120
Query: 227 EMLHHGAYQPNEFIFGSVFSACS------------------------------------- 249
+M G ++PN +V S+C+
Sbjct: 121 KMRDSG-FEPNSVTLTTVISSCARLLDLERGKEIHREVMQNGMVLDGFVGSALVDMYGKF 179
Query: 250 ---NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
+ A+ +F ++ L +WN+LIAG +S +++ E + LF M P T+ S+L
Sbjct: 180 GCLDLAKDIFEQMPKKTLVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVTTLSSIL 239
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
AC L G +H Y ++ ++ V + ++ +Y KC + +A +F L K A+
Sbjct: 240 LACSRAAHLQHGRFIHGYAVRNRVQLDIFVSSGLIELYFKCGKVQSAENIFYMLPK-ANV 298
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
V WN +I+ + + ++ M + +KPD +TF+ ++ AC+++A+LE ++H
Sbjct: 299 VLWNVMISGYVTIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQLAALEKGKEIHNC 358
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
ITK L + VM L+D+Y KCG++ A +FN + D++SW+S+I Y G EA
Sbjct: 359 ITKNDLETNEIVMGALLDMYAKCGAVDEALSVFNKLPERDLLSWTSIISAYGSHGQALEA 418
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
L+LF ++ SP+ VT + VL+ACSH GLV++G + + M YGI P EH SC++D
Sbjct: 419 LRLFEELQQSKASPDAVTFLAVLSACSHAGLVDKGYYYFNQMITNYGIKPGLEHYSCLID 478
Query: 547 LLARAGCVHEAEDFINQMAC 566
LL R + E +N++ C
Sbjct: 479 LLGR---IQEQSQELNEIPC 495
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 214/447 (47%), Gaps = 42/447 (9%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+++ K +Y EAL +D ++ TY ++ AC L GR +H H++ S
Sbjct: 1 MAAYTKNCMYTEALELFDRLLQYPYLQPDSFTYPSVLKACGGLGRYDYGRMIHTHLIKSG 60
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
D+V+ + +++++ KC A FD+MP+R+V W +I+ Q+ + A++++
Sbjct: 61 FVFDIVVASSLVSLHAKCNLFGYAIQLFDEMPERDVACWNTVISCYYQDGKAEKALEMFG 120
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M SG P T ++I +C+ L + G+++H V+++ +AL+ MY KF
Sbjct: 121 KMRDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVMQNGMVLDGFVGSALVDMYGKFG 180
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A+++F + +K + +W S+IA +S E + F M G +P S+
Sbjct: 181 CLDLAKDIFEQMPKKTLVAWNSLIAGYSSAADSKECIELFWRMNMEGT-KPTVTTLSSIL 239
Query: 246 SACSNFARI----------------------------------------LFNEIDSPDLA 265
ACS A + +F + ++
Sbjct: 240 LACSRAAHLQHGRFIHGYAVRNRVQLDIFVSSGLIELYFKCGKVQSAENIFYMLPKANVV 299
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
WN +I+G + + +A+ ++ EM+ + PD +T S+L AC L +G ++H+ I
Sbjct: 300 LWNVMISGYVTIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQLAALEKGKEIHNCI 359
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
K ++N V A+L MYAKC + AL VF +L + D +SW SII+A H QA E
Sbjct: 360 TKNDLETNEIVMGALLDMYAKCGAVDEALSVFNKLPER-DLLSWTSIISAYGSHGQALEA 418
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACA 412
RLF + S+ PD +TF V+ AC+
Sbjct: 419 LRLFEELQQSKASPDAVTFLAVLSACS 445
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 203/413 (49%), Gaps = 47/413 (11%)
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------- 254
+AA++K EAL F+ +L + QP+ F + SV AC R
Sbjct: 1 MAAYTKNCMYTEALELFDRLLQYPYLQPDSFTYPSVLKACGGLGRYDYGRMIHTHLIKSG 60
Query: 255 --------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
LF+E+ D+A WN +I+ A +A+ +F
Sbjct: 61 FVFDIVVASSLVSLHAKCNLFGYAIQLFDEMPERDVACWNTVISCYYQDGKAEKALEMFG 120
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+MRD P+ +T+ +++ +C L L +G ++H +++ G + V +A++ MY K
Sbjct: 121 KMRDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVMQNGMVLDGFVGSALVDMYGKFG 180
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
L A +F+++ K V+WNS+IA ++E LF RM KP T + ++
Sbjct: 181 CLDLAKDIFEQMPKKT-LVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVTTLSSIL 239
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
AC++ A L+ +H Y + + D+FV +GL+++Y KCG + SA +F + +VV
Sbjct: 240 LACSRAAHLQHGRFIHGYAVRNRVQLDIFVSSGLIELYFKCGKVQSAENIFYMLPKANVV 299
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR-I 527
W+ +I GY G +AL ++ M+ V P+ VT +L+ACS + +E+G ++ I
Sbjct: 300 LWNVMISGYVTIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQLAALEKGKEIHNCI 359
Query: 528 MENEYGIIPTREHC-SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+N+ + T E ++D+ A+ G V EA N++ + D++ W S++++
Sbjct: 360 TKND---LETNEIVMGALLDMYAKCGAVDEALSVFNKLP-ERDLLSWTSIISA 408
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 164/340 (48%), Gaps = 46/340 (13%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T +IS+C+ L L+ G+++H ++ + D + + +++MYGK G L+ A+ F++M
Sbjct: 133 TLTTVISSCARLLDLERGKEIHREVMQNGMVLDGFVGSALVDMYGKFGCLDLAKDIFEQM 192
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P++ +V+W ++IAG S + I+L+ +M G P T SI+ ACS + GR
Sbjct: 193 PKKTLVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVTTLSSILLACSRAAHLQHGR 252
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H + +++ + + LI +Y K ++ A N+F + + +V W MI+ + +G
Sbjct: 253 FIHGYAVRNRVQLDIFVSSGLIELYFKCGKVQSAENIFYMLPKANVVLWNVMISGYVTIG 312
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
++AL ++EM + +P+ F S+ SACS A +
Sbjct: 313 DYVKALDMYDEM-KIASVKPDAVTFSSILSACSQLAALEKGKEIHNCITKNDLETNEIVM 371
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+FN++ DL SW ++I+ SH A EA+ LF E++ +
Sbjct: 372 GALLDMYAKCGAVDEALSVFNKLPERDLLSWTSIISAYGSHGQALEALRLFEELQQSKAS 431
Query: 297 PDGLTVHSLLCAC-----IGRLTLYQGMQVHSYIIKMGFD 331
PD +T ++L AC + + Y + +Y IK G +
Sbjct: 432 PDAVTFLAVLSACSHAGLVDKGYYYFNQMITNYGIKPGLE 471
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 134/255 (52%), Gaps = 11/255 (4%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
N + +T + ++ ACS LQ GR +H + + ++ Q D+ + + ++ +Y KCG +
Sbjct: 224 NMEGTKPTVTTLSSILLACSRAAHLQHGRFIHGYAVRNRVQLDIFVSSGLIELYFKCGKV 283
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
+ A F +P+ NVV W MI+G A+ +Y +M + V P TF SI+ AC
Sbjct: 284 QSAENIFYMLPKANVVLWNVMISGYVTIGDYVKALDMYDEMKIASVKPDAVTFSSILSAC 343
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
S L ++ G+++H + K++ ++ I AL+ MY K + +A +VF+ + +D+ SW
Sbjct: 344 SQLAALEKGKEIHNCITKNDLETNEIVMGALLDMYAKCGAVDEALSVFNKLPERDLLSWT 403
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARILF 256
S+I+A+ G LEAL F E+ A P+ F +V SACS+ F +++
Sbjct: 404 SIISAYGSHGQALEALRLFEELQQSKA-SPDAVTFLAVLSACSHAGLVDKGYYYFNQMIT 462
Query: 257 NEIDSPDLASWNALI 271
N P L ++ LI
Sbjct: 463 NYGIKPGLEHYSCLI 477
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 94/152 (61%), Gaps = 11/152 (7%)
Query: 4 DYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILL 63
DYV +L ++Y+E +A +++ T++ ++SACS L +L+ G+++H+ I
Sbjct: 313 DYVKAL---DMYDEMKIA--------SVKPDAVTFSSILSACSQLAALEKGKEIHNCITK 361
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
+ + + ++ +L+MY KCG++++A F+K+P+R+++SWT++I+ + Q +A++L
Sbjct: 362 NDLETNEIVMGALLDMYAKCGAVDEALSVFNKLPERDLLSWTSIISAYGSHGQALEALRL 421
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ ++ QS P TF +++ ACS G V G
Sbjct: 422 FEELQQSKASPDAVTFLAVLSACSHAGLVDKG 453
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 177/631 (28%), Positives = 316/631 (50%), Gaps = 59/631 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDF----SQNNTNIRIRPS--TYAGLISACSSLRS--LQLG 54
N +S C++ +A+ A+ + T + RP+ T+ L++ SL L L
Sbjct: 213 NSIISVYCRRG---DAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLL 269
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
++ I S D+ + + +++ + + G ++ A+M F++M RN V+ ++ G ++
Sbjct: 270 EQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQ 329
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR----QLHAHVIKSEH-GS 169
+Q +A K++ +M + V ++ ++ A + ++ G+ ++HA++I++
Sbjct: 330 HQGEEAAKIFKEM-KDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDV 388
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
++ NAL+ +Y K + I +AR++F + KD SW S+I+ EA+ F+ M
Sbjct: 389 WILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMR 448
Query: 230 HHGAYQPNEFIFGSVFSACSNFARI---------------------------LFNEID-- 260
+G P++F S S+C++ I L+ E D
Sbjct: 449 RNGMV-PSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCM 507
Query: 261 -----------SPDLASWNALIAGVA-SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCA 308
D SWN+ I +A S ++ +A+ F EM P+ +T ++L A
Sbjct: 508 EEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSA 567
Query: 309 CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS 368
L G Q+H+ I+K + + N +L Y KC + + ++F + + D VS
Sbjct: 568 VSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVS 627
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
WN++I+ + + + L M+ + D T V+ ACA +A+LE ++H
Sbjct: 628 WNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAI 687
Query: 429 KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
+ L +V V + L+D+Y KCG + A + F M ++ SW+S+I GYA+ G G +ALK
Sbjct: 688 RACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALK 747
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLL 548
LFT+M+ G P+ VT VGVL+ACSHVGLV+EG ++ M Y + P EH SC+VDLL
Sbjct: 748 LFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLL 807
Query: 549 ARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
RAG V + E+FI M + + ++W+++L +
Sbjct: 808 GRAGDVKKLEEFIKTMPMNPNALIWRTILGA 838
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/514 (27%), Positives = 251/514 (48%), Gaps = 58/514 (11%)
Query: 50 SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIA 109
+++ ++H I + DV N ++N++ + G+L A+ FD+MPQ+N+VSW+ +++
Sbjct: 54 TVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVS 113
Query: 110 GCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS--VCLGRQLHAHVIKSEH 167
G +QN ++A L+ ++ +G++P + GS ++AC LG + LG ++H + KS +
Sbjct: 114 GYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPY 173
Query: 168 GSHLIAQNALIAMYTKFD-RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
S ++ N L++MY+ I DAR VF I K SW S+I+ + + G + A F+
Sbjct: 174 ASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFS 233
Query: 227 EMLHHGAY---QPNEFIFGSVFS-ACS--------------------------------- 249
M +PNE+ F S+ + ACS
Sbjct: 234 SMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVS 293
Query: 250 --------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
+ A+++F ++D + + N L+ G+A EA +F EM+D L+ +
Sbjct: 294 GFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKD--LVEINAS 351
Query: 302 VHSLLCACIGRLT-----LYQGMQVHSYIIKMGF-DSNVPVCNAILTMYAKCSVLCNALL 355
+++L + + +G +VH+Y+I+ D + + NA++ +YAKC+ + NA
Sbjct: 352 SYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARS 411
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F +L + D+VSWNSII+ + + EE F M + + P + + +CA +
Sbjct: 412 IF-QLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLG 470
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+ + Q+H K GL DV V N L+ +Y + + +K+F M D VSW+S I
Sbjct: 471 WIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIG 530
Query: 476 GYAQFGCGD-EALKLFTRMRSLGVSPNLVTLVGV 508
A +A+K F M G PN VT + +
Sbjct: 531 ALATSEASVLQAIKYFLEMMQAGWKPNRVTFINI 564
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 167/608 (27%), Positives = 287/608 (47%), Gaps = 75/608 (12%)
Query: 35 PSTYA--GLISACSSL--RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC-GSLEDA 89
P+ YA + AC L L+LG ++H I S D+VL N +++MY C S++DA
Sbjct: 138 PNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDA 197
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV----MPGQFTFGSIIK- 144
R F+++ + SW ++I+ + A KL+ M + P ++TF S++
Sbjct: 198 RRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTV 257
Query: 145 ACSGLG-SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS-------- 195
ACS + + L Q+ A + KS L +AL++ + ++ I A+ +F
Sbjct: 258 ACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAV 317
Query: 196 -------GIARK-------------------DVTSWGSMIAAFSKL---------GYELE 220
G+AR+ + +S+ +++AF++ G E+
Sbjct: 318 TMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVH 377
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACS--NFARILFNEIDSPDLASWNALIAGVASHS 278
A N ++ N + ++++ C+ + AR +F + S D SWN++I+G+ +
Sbjct: 378 AYLIRNALVDVWILIGNALV--NLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNE 435
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
EA++ F MR ++P +V S L +C + G Q+H IK G D +V V N
Sbjct: 436 RFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSN 495
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL--FRLFSRMLASQ 396
A+LT+YA+ + VF L D VSWNS I A L ++A L + F M+ +
Sbjct: 496 ALLTLYAETDCMEEYQKVFF-LMPEYDQVSWNSFIGA-LATSEASVLQAIKYFLEMMQAG 553
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
KP+ +TF +++ A + ++ LE+ Q+H I K +A D + N L+ Y KC +
Sbjct: 554 WKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCE 613
Query: 457 KLFNFM-ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
+F+ M E D VSW+++I GY G +A+ L M G + TL VL+AC+ V
Sbjct: 614 IIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASV 673
Query: 516 GLVEEGLHLY-----RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
+E G+ ++ +E E + S +VD+ A+ G + A F M +I
Sbjct: 674 ATLERGMEVHACAIRACLEAEVVV------GSALVDMYAKCGKIDYASRFFELMPV-RNI 726
Query: 571 VVWKSLLA 578
W S+++
Sbjct: 727 YSWNSMIS 734
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/469 (23%), Positives = 217/469 (46%), Gaps = 61/469 (13%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDH 60
N +S L + EA+ + + N + PS ++ +S+C+SL + LG+++H
Sbjct: 425 NSIISGLDHNERFEEAVACFHTMRRNGMV---PSKFSVISTLSSCASLGWIMLGQQIHGE 481
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN-D 119
+ DV + N +L +Y + +E+ + F MP+ + VSW + I + +
Sbjct: 482 GIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQ 541
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
AIK +++M+Q+G P + TF +I+ A S L + LGRQ+HA ++K +N L+A
Sbjct: 542 AIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLA 601
Query: 180 MYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
Y K +++ D +FS ++ R+D SW +MI+ + G +A+ M+ G + ++
Sbjct: 602 FYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQ-RLDD 660
Query: 239 FIFGSVFSACS----------------------------------------NFARILFNE 258
F +V SAC+ ++A F
Sbjct: 661 FTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFEL 720
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ ++ SWN++I+G A H + +A+ LF++M+ LPD +T +L AC + +G
Sbjct: 721 MPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEG 780
Query: 319 MQVHSYIIKMG----FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
+ + MG + + ++ + + + K + N +++ W +I+
Sbjct: 781 FE---HFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILG 837
Query: 375 ACLQHN-QAEELFRLFSRMLASQIKP----DHITFNDVMGACAKMASLE 418
AC + N + EL R ++ML +++P +++ +++ A K +E
Sbjct: 838 ACCRANSRNTELGRRAAKMLI-ELEPLNAVNYVLLSNMHAAGGKWEDVE 885
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 129/268 (48%), Gaps = 27/268 (10%)
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
T+ Q+H I K G S+V CN ++ ++ + L +A +F E+ + + VSW+ ++
Sbjct: 54 TVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQK-NLVSWSCLV 112
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS--LEMVTQLHCYITKTG 431
+ Q+ +E LF ++++ + P+H + AC ++ L++ ++H I+K+
Sbjct: 113 SGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSP 172
Query: 432 LAFDVFVMNGLMDIYIKC-GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
A D+ + N LM +Y C S+ AR++F ++ SW+S+I Y + G A KLF
Sbjct: 173 YASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLF 232
Query: 491 TRMR----SLGVSPNLVTLVGVLT-ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
+ M+ L PN T ++T ACS LV+ GL L M + E S V
Sbjct: 233 SSMQREATELNCRPNEYTFCSLVTVACS---LVDCGLTLLEQM------LARIEKSSFVK 283
Query: 546 DL---------LARAGCVHEAEDFINQM 564
DL AR G + A+ QM
Sbjct: 284 DLYVGSALVSGFARYGLIDSAKMIFEQM 311
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 15/159 (9%)
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
P ++ +N +C ++E QLH I KTGL DVF N L++I+++ G+L SA+KL
Sbjct: 41 PLNLDYNRYRDSC----TVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKL 96
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG-- 516
F+ M ++VSWS L+ GYAQ G DEA LF + S G+ PN + L AC +G
Sbjct: 97 FDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPN 156
Query: 517 LVEEGLHLYRIM-ENEYG--------IIPTREHCSCVVD 546
+++ G+ ++ ++ ++ Y ++ HCS +D
Sbjct: 157 MLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASID 195
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 155/485 (31%), Positives = 247/485 (50%), Gaps = 48/485 (9%)
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF-SGIAR 199
+ +++C+ ++ G+QLH+ +I + +LI MY+K ++ +A VF
Sbjct: 16 AFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHE 75
Query: 200 KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------- 251
++V ++ ++I+ F G + + +M G P+++ F V C
Sbjct: 76 RNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGV-MPDKYTFPCVVRTCCEVMEVKKIHG 134
Query: 252 -----------------------------ARILFNEIDSPDLASWNALIAGVASHSNANE 282
A+ +F E+ D+ WNA+I G A +E
Sbjct: 135 CLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDE 194
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
A+ +F M + + P T+ +L R L G VH ++KMG+DS V V NA++
Sbjct: 195 ALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALID 254
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
MY KC + +AL++F E+ D SWNSII+ Q + RLF +ML S I PD +
Sbjct: 255 MYGKCKHIGDALIIF-EMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLV 313
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFD--------VFVMNGLMDIYIKCGSLGS 454
T V+ AC+ +A+L ++H Y+ GL D + V N +MD+Y KCGS+ +
Sbjct: 314 TITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNN 373
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
A K+F+ M DV SW+ +I+GY G EAL +F++M PN VTLVGVL+AC+H
Sbjct: 374 ALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNH 433
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
G V G ME+ +G+IPT EH +CV+D+L RAG + +A + + +M A+ VVW+
Sbjct: 434 AGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWR 493
Query: 575 SLLAS 579
+LL +
Sbjct: 494 ALLGA 498
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 198/420 (47%), Gaps = 54/420 (12%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF-DKMPQR 99
+ +C+ ++L G+++H ++ P ++NMY KCG + +A + F D +R
Sbjct: 17 FLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHER 76
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
NV ++ A+I+G N + + Y +M GVMP ++TF +++ C + V +++H
Sbjct: 77 NVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KKIH 133
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
++K + +AL+ Y K + DA+ VF ++ +DV W +MI ++K+G
Sbjct: 134 GCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLD 193
Query: 220 EALCHFNEMLHHGAYQPNEF-------IFGS----------------------------- 243
EAL F M H P+ F +F S
Sbjct: 194 EALEVFRRM-HVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNAL 252
Query: 244 --VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
++ C + A I+F I+ D+ SWN++I+ + + + LF +M +LPD
Sbjct: 253 IDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDL 312
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS--------NVPVCNAILTMYAKCSVLC 351
+T+ ++L AC L G ++H Y+I G N+ V NA++ MYAKC +
Sbjct: 313 VTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMN 372
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
NAL +F + K D SWN +I H A E +FS+M ++ KP+ +T V+ AC
Sbjct: 373 NALKIFDSMSKK-DVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSAC 431
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 190/420 (45%), Gaps = 67/420 (15%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ C + + +K+H +L + DV + + ++N Y K GS+EDA+ F ++
Sbjct: 115 TFPCVVRTCCEVMEV---KKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGEL 171
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+VV W AMI G ++ ++A++++ +M GV P +FT I+ + G + G+
Sbjct: 172 SIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGK 231
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H V+K + S + NALI MY K I DA +F I KD+ SW S+I+ + G
Sbjct: 232 TVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCG 291
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL--------------------- 255
L F++ML G P+ +V ACS+ A ++
Sbjct: 292 DHDGTLRLFDKMLGSGIL-PDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENG 350
Query: 256 ---------------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
F+ + D+ASWN +I G H A EA+ +FS
Sbjct: 351 AVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFS 410
Query: 289 EMRDRELLPDGLTVHSLLCACI-------GRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
+M + E P+ +T+ +L AC GRL L Q G + ++
Sbjct: 411 QMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMEST------FGVIPTIEHYTCVI 464
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
M + L +A + +++ A+ V W +++ AC H A EL + +R + Q++P+H
Sbjct: 465 DMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNA-ELAEIAARQVL-QLEPEH 522
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 170/572 (29%), Positives = 278/572 (48%), Gaps = 48/572 (8%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGS--LEDARMGFDKMPQ--RNVVSWTAMIA 109
G +H L S + N ++N Y L A FD +P R+V SW +++
Sbjct: 31 GEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSLLN 90
Query: 110 GCSQNYQENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG 168
S+ ++ DA+ + ML S V+P +F + A + S G HA K
Sbjct: 91 PLSR-HRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSA 149
Query: 169 -SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
S++ +L+ MY K + DAR +F G+ +++ SW +M+A ++ EA F
Sbjct: 150 VSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRL 209
Query: 228 MLHHGAYQPNEFIFGSVFSACS---------------------NFARI------------ 254
ML + +EF+ +V SA S +F +
Sbjct: 210 MLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAG 269
Query: 255 -------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC 307
+F + +W+A+I G A + A+ A+S+FS+M P T +L
Sbjct: 270 CMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLN 329
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
A L G Q H ++K+GF+ + V +A++ MYAKC + +A F +L D V
Sbjct: 330 ASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQL-YEVDIV 388
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
W ++++ +Q+ + EE L++RM I P T + ACA +A+LE QLH I
Sbjct: 389 LWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQI 448
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K GL V + L +Y KCG+L +F + + DV++W+S+I G++Q GCG+ AL
Sbjct: 449 VKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGAL 508
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
LF M+ G P+ +T + +L ACSH+GLV+ G + +M +YG+ P +H +C+VD+
Sbjct: 509 DLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDI 568
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
L+RAG + EA+DFI + D +W+ +L +
Sbjct: 569 LSRAGMLKEAKDFIESITIDHGTCLWRIVLGA 600
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 129/218 (59%), Gaps = 1/218 (0%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ G+++A S L +L +G++ H ++ + + +++ +++MY KCG + DA+ GFD++
Sbjct: 323 TFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQL 382
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ ++V WTAM++G QN + +A+ LY +M + G++P + T S ++AC+G+ ++ G+
Sbjct: 383 YEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGK 442
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
QLH ++K G +AL MY+K + D +VF I +DV +W S+I+ FS+ G
Sbjct: 443 QLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNG 502
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
AL F EM G P+ F ++ ACS+ +
Sbjct: 503 CGNGALDLFEEMKMEGTI-PDNITFINILCACSHMGLV 539
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 186/419 (44%), Gaps = 52/419 (12%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++SA S L +G ++H I+ V ++N ++ MY K G + A F+ +RN
Sbjct: 226 VLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERN 285
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
++W+AMI G +QN + + A+ ++ QM +G P +FTF ++ A S LG++ +G+Q H
Sbjct: 286 SITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHG 345
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
++K + ++AL+ MY K I DA+ F + D+ W +M++ + G E
Sbjct: 346 LMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEE 405
Query: 221 ALCHFNEMLHHG-------------------AYQPNEFI------------------FGS 243
AL + M G A +P + + +
Sbjct: 406 ALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALST 465
Query: 244 VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
++S C N +F I D+ +WN++I+G + + N A+ LF EM+ +PD +T
Sbjct: 466 MYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNIT 525
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
++LCAC + +G + S + K G + ++ + ++ +L A + +
Sbjct: 526 FINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESI 585
Query: 361 GKNADSVSWNSIIAACLQHNQ-------AEELFRLFSR-----MLASQIKPDHITFNDV 407
+ + W ++ AC E L L +R +L S I +NDV
Sbjct: 586 TIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTRDSSAYILLSNIYASQRKWNDV 644
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 1/159 (0%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VS + + EAL Y + I ST A + AC+ + +L+ G+++H I+
Sbjct: 394 VSGHVQNGEHEEALTLYA-RMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYG 452
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ + + MY KCG+LED F ++P R+V++W ++I+G SQN N A+ L+
Sbjct: 453 LGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFE 512
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK 164
+M G +P TF +I+ ACS +G V G + + + K
Sbjct: 513 EMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTK 551
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 172/550 (31%), Positives = 272/550 (49%), Gaps = 42/550 (7%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
DV N ++ Y G DAR FD+MP R++VSW ++++ N DA + + M+
Sbjct: 146 DVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMM 205
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
+SG+ + S++ AC G +H V+KS S + NAL+ MY KF +
Sbjct: 206 RSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLE 265
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG---------------- 232
+ VF+G+ K+ SW S + F+ G+ + L F M H
Sbjct: 266 SSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALV 325
Query: 233 ------------------AYQPNEFIFGSVFSACSNF-----ARILFNEIDSPDLASWNA 269
A + + FI S+ + F A +F I+ ++ SWNA
Sbjct: 326 DLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNA 385
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
+IA +A + EA SL EM+ P+ T+ +LL AC ++ G Q+H++ I
Sbjct: 386 MIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRS 445
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
S++ V NA++ +YAKC L A +F K D VS+N++I Q E LF
Sbjct: 446 LMSDLFVSNALIDVYAKCGQLSVAQDIFDRSEK--DDVSYNTLIVGYSQSQCCFESLHLF 503
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
+M ++ I+ D ++F + ACA +++ + ++H + + L F+ N L+D+Y K
Sbjct: 504 QQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKG 563
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
G L +A K+FN + DV SW+++ILGY G D A +LF M+ GV + V+ + VL
Sbjct: 564 GMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVL 623
Query: 510 TACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
+ACSH GLV+ G + M + I P + H +C+VDLL RAG + E+ + I M A+
Sbjct: 624 SACSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESVEIITNMPFPAN 682
Query: 570 IVVWKSLLAS 579
VW +LL S
Sbjct: 683 SDVWGALLGS 692
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 147/575 (25%), Positives = 265/575 (46%), Gaps = 60/575 (10%)
Query: 55 RKVHDHILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR--NVVSWTAMIAGC 111
R+ H L+S + L +L Y + AR+ P R + W ++
Sbjct: 22 RRAHAASLVSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRAL 81
Query: 112 SQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV-----CLGRQLHAHVIKSE 166
+ ++A+++Y M++SGV P TF + A + G +LHA ++
Sbjct: 82 ASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALR-- 139
Query: 167 HG---SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALC 223
G + + A N L+ Y R DAR VF + +D+ SW S+++A G +A
Sbjct: 140 RGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKR 199
Query: 224 HFNEMLHHG---------------AYQPNE--------FIFGSVFSACSNFARIL----- 255
M+ G + +E + S + N L
Sbjct: 200 AVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYG 259
Query: 256 -----------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
FN + + SWN+ + A + + +F M + E+ P +T+ S
Sbjct: 260 KFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSS 319
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL-GKN 363
LL A + + G +VH Y I+ +S++ + N+++ MYAK L A +F+ + G+N
Sbjct: 320 LLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRN 379
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
VSWN++IA Q+ E F L M + P+ T +++ AC+++AS++M Q+
Sbjct: 380 V--VSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQI 437
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H + L D+FV N L+D+Y KCG L A+ +F+ E D VS+++LI+GY+Q C
Sbjct: 438 HAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSEKDD-VSYNTLIVGYSQSQCC 496
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH-CS 542
E+L LF +MRS G+ + V+ +G L+AC+++ ++G ++ ++ ++ T +
Sbjct: 497 FESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRR--LLNTHPFLAN 554
Query: 543 CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
++DL + G + A N++ D+ W +++
Sbjct: 555 SLLDLYTKGGMLATASKIFNRI-TRKDVASWNTMI 588
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/515 (24%), Positives = 224/515 (43%), Gaps = 49/515 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS+L + +A A + I + ++ ++ AC + R G VH +L
Sbjct: 182 NSLVSALLTNGMLEDAKRAV-VGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVL 240
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S V L N +++MYGK G LE + F+ M ++N VSW + + + D ++
Sbjct: 241 KSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLE 300
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ M + V PG T S++ A LG LG+++H + I+ S + N+L+ MY
Sbjct: 301 MFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYA 360
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
KF + A +F I ++V SW +MIA ++ G E EA EM +G PN F
Sbjct: 361 KFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGEC-PNSFTLV 419
Query: 243 SVFSACSNFARI----------------------------------------LFNEIDSP 262
++ ACS A + +F+ +
Sbjct: 420 NLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSEKD 479
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ S+N LI G + E++ LF +MR + D ++ L AC QG ++H
Sbjct: 480 DV-SYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIH 538
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+++ +++ + N++L +Y K +L A +F + + D SWN++I H Q
Sbjct: 539 GVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRK-DVASWNTMILGYGMHGQI 597
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
+ F LF M + DH+++ V+ AC+ ++ + + + +
Sbjct: 598 DVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMIAQNIKPQQMHYACM 657
Query: 443 MDIYIKCGSLGSARKLFN---FMENPDVVSWSSLI 474
+D+ + G L + ++ F N DV W +L+
Sbjct: 658 VDLLGRAGQLSESVEIITNMPFPANSDV--WGALL 690
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 186/405 (45%), Gaps = 44/405 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T + L+ A L LG++VH + + + D+ + N +++MY K G LE A F+ +
Sbjct: 316 TLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENI 375
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
RNVVSW AMIA +QN E +A L I+M ++G P FT +++ ACS + SV +G+
Sbjct: 376 EGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGK 435
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+HA I S L NALI +Y K ++ A+++F + KD S+ ++I +S+
Sbjct: 436 QIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDR-SEKDDVSYNTLIVGYSQSQ 494
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
E+L F +M G + + F SAC+N
Sbjct: 495 CCFESLHLFQQMRSAG-IEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLA 553
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A +FN I D+ASWN +I G H + A LF M+D +
Sbjct: 554 NSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVD 613
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
D ++ ++L AC + +G + S +I ++ + + L ++ +
Sbjct: 614 YDHVSYIAVLSACSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESVEI 673
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+ A+S W +++ +C H EL RL + L ++KP+H
Sbjct: 674 ITNMPFPANSDVWGALLGSCRIHGDI-ELARLAAEHLF-ELKPEH 716
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 156/324 (48%), Gaps = 19/324 (5%)
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY-----QGMQV 321
WN+L +AS +EA+ +++ M + PD T L A + +G ++
Sbjct: 74 WNSLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAEL 133
Query: 322 HSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
H+ ++ G ++V N ++T YA +A VF E+ D VSWNS+++A L +
Sbjct: 134 HAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPAR-DIVSWNSLVSALLTNG 192
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
E+ R M+ S I + + V+ AC +H + K+GL V + N
Sbjct: 193 MLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGN 252
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+D+Y K G L S+ ++FN M+ + VSW+S + +A G ++ L++F M V+P
Sbjct: 253 ALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTP 312
Query: 501 NLVTLVGVLTACS-----HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
VTL +L A H+G G + R ME++ I + ++D+ A+ GC+
Sbjct: 313 GSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFI------ANSLMDMYAKFGCLE 366
Query: 556 EAEDFINQMACDADIVVWKSLLAS 579
+A + ++V W +++A+
Sbjct: 367 KASAIFENIE-GRNVVSWNAMIAN 389
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 19/266 (7%)
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS-WNSIIAACLQHNQAE 383
++ +++P+ A+L YA + +A L+ + S WNS+ A
Sbjct: 29 LVSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRALASAGLPS 88
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV-----TQLHCYITKTGLAF-DVF 437
E R+++ M+ S ++PD TF + A A E +LH + GL DVF
Sbjct: 89 EALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRRGLLLADVF 148
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
N L+ Y G AR++F+ M D+VSW+SL+ G ++A + M G
Sbjct: 149 AGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMMRSG 208
Query: 498 VSPNLVTLVGVLTACSH-----VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAG 552
+ N+ +LV V+ AC GL GL L + G+ + +VD+ + G
Sbjct: 209 IPVNVASLVSVVPACGTERDEGFGLSVHGLVL------KSGLDSVVNLGNALVDMYGKFG 262
Query: 553 CVHEAEDFINQMACDADIVVWKSLLA 578
+ + N M + + V W S L
Sbjct: 263 DLESSMRVFNGMQ-EKNEVSWNSALG 287
>gi|302782902|ref|XP_002973224.1| hypothetical protein SELMODRAFT_98955 [Selaginella moellendorffii]
gi|300158977|gb|EFJ25598.1| hypothetical protein SELMODRAFT_98955 [Selaginella moellendorffii]
Length = 546
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 158/489 (32%), Positives = 246/489 (50%), Gaps = 46/489 (9%)
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G+ P TF I+ ACS LG V GR++HA ++ + + A++ MY+K +++ DA
Sbjct: 5 GIRPNSVTFLWILGACSNLGDVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDA 64
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-- 248
+ VF + RKDV SW ++I AFS+LG AL F EM G +PNE F ++ +AC
Sbjct: 65 KKVFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLDGV-KPNESTFVNILAACTY 123
Query: 249 ---------------------------------SNF-----ARILFNEIDSPDLASWNAL 270
S F A+ F+ + SWNA+
Sbjct: 124 MDALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAI 183
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
+ H + ++A+SL+ EM PD T LL AC L +G ++H+ +MG
Sbjct: 184 VRAYIQHGHISQAISLYKEMDVHGAEPDTFTHVCLLGACSSLGALEEGERIHA---RMGD 240
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+ +AI+ MYAKC + +A+ F ++ +++ V WN++IA +Q +E L+
Sbjct: 241 KPDGLAGSAIVAMYAKCGGIEHAMTAFTKM-SSSNVVVWNALIAGYVQGEHWQEALDLYH 299
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
M ++ D TF+ V+GAC+ L +H I GL V + NGL++++ KCG
Sbjct: 300 AMNLEGLEADIYTFSSVLGACSGAKDLSEGRAVHARIVSGGLEVVVPLQNGLVNMFAKCG 359
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
SL A ++F M + + VSW+S++ + Q G G A +LF M G P+ T +L
Sbjct: 360 SLTLALEMFRGMASRNTVSWNSMVTAFCQHGEGGGAFELFKEMLLEGAEPHEQTFTSILN 419
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
CSH GL+++G + M +E+GI P EH CV+DLL R G + AE + A +
Sbjct: 420 FCSHSGLLQDGFGYFFDMVDEFGIAPVDEHYRCVIDLLGRTGHIAAAEKMVEH-AFPGSV 478
Query: 571 VVWKSLLAS 579
+ W SLLA+
Sbjct: 479 IAWTSLLAA 487
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 151/550 (27%), Positives = 256/550 (46%), Gaps = 67/550 (12%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IRP+ T+ ++ ACS+L ++ GRK+H ++ D V+ IL MY KC L DA+
Sbjct: 6 IRPNSVTFLWILGACSNLGDVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAK 65
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD + +++VVSWTA+I SQ + A++L+ +M GV P + TF +I+ AC+ +
Sbjct: 66 KVFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYMD 125
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ G +L+ I +G+ + + + MY++F +++A+ F + K SW +++
Sbjct: 126 ALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVR 185
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------- 251
A+ + G+ +A+ + EM HGA +P+ F + ACS+
Sbjct: 186 AYIQHGHISQAISLYKEMDVHGA-EPDTFTHVCLLGACSSLGALEEGERIHARMGDKPDG 244
Query: 252 ------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
A F ++ S ++ WNALIAG + EA+ L+ M
Sbjct: 245 LAGSAIVAMYAKCGGIEHAMTAFTKMSSSNVVVWNALIAGYVQGEHWQEALDLYHAMNLE 304
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
L D T S+L AC G L +G VH+ I+ G + VP+ N ++ M+AKC L A
Sbjct: 305 GLEADIYTFSSVLGACSGAKDLSEGRAVHARIVSGGLEVVVPLQNGLVNMFAKCGSLTLA 364
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
L +F+ + ++VSWNS++ A QH + F LF ML +P TF ++ C+
Sbjct: 365 LEMFRGMASR-NTVSWNSMVTAFCQHGEGGGAFELFKEMLLEGAEPHEQTFTSILNFCSH 423
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGL----------MDIYIKCGSLGSARKLFNFME 463
L+ G FD+ G+ +D+ + G + +A K+
Sbjct: 424 SGLLQ---------DGFGYFFDMVDEFGIAPVDEHYRCVIDLLGRTGHIAAAEKMVEHAF 474
Query: 464 NPDVVSWSSLILG---YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
V++W+SL+ Y A + R+R +P LV + C+ G +
Sbjct: 475 PGSVIAWTSLLAACRTYRNVEIAARATEELMRVRPENPAP----LVQLANLCAEAGRWDA 530
Query: 521 GLHLYRIMEN 530
+ R+ME
Sbjct: 531 VERVKRMMEE 540
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 178/416 (42%), Gaps = 54/416 (12%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
++ ST+ +++AC+ + +L+ G K++ + DV + + + MY + G+L +A
Sbjct: 106 GVKPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEA 165
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
+ FD + +++ SW A++ Q+ + AI LY +M G P FT ++ ACS L
Sbjct: 166 KAAFDHLREKSTGSWNAIVRAYIQHGHISQAISLYKEMDVHGAEPDTFTHVCLLGACSSL 225
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G++ G ++HA + G +A +A++AMY K I A F+ ++ +V W ++I
Sbjct: 226 GALEEGERIHARMGDKPDG---LAGSAIVAMYAKCGGIEHAMTAFTKMSSSNVVVWNALI 282
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARI----- 254
A + + + EAL ++ M G + + + F SV ACS ARI
Sbjct: 283 AGYVQGEHWQEALDLYHAMNLEG-LEADIYTFSSVLGACSGAKDLSEGRAVHARIVSGGL 341
Query: 255 -------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
+F + S + SWN+++ H A LF E
Sbjct: 342 EVVVPLQNGLVNMFAKCGSLTLALEMFRGMASRNTVSWNSMVTAFCQHGEGGGAFELFKE 401
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV-PV---CNAILTMYA 345
M P T S+L C L G Y M + + PV ++ +
Sbjct: 402 MLLEGAEPHEQTFTSILNFCSHSGLLQDGF---GYFFDMVDEFGIAPVDEHYRCVIDLLG 458
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+ + A + E ++W S++AAC + E R ++ +++P++
Sbjct: 459 RTGHIAAAEKMV-EHAFPGSVIAWTSLLAACRTYRNVEIAARATEELM--RVRPEN 511
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + + EAL Y + N + T++ ++ ACS + L GR VH I+
Sbjct: 279 NALIAGYVQGEHWQEALDLY-HAMNLEGLEADIYTFSSVLGACSGAKDLSEGRAVHARIV 337
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ V LQN ++NM+ KCGSL A F M RN VSW +M+ Q+ + A +
Sbjct: 338 SGGLEVVVPLQNGLVNMFAKCGSLTLALEMFRGMASRNTVSWNSMVTAFCQHGEGGGAFE 397
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLG 150
L+ +ML G P + TF SI+ CS G
Sbjct: 398 LFKEMLLEGAEPHEQTFTSILNFCSHSG 425
>gi|302763041|ref|XP_002964942.1| hypothetical protein SELMODRAFT_20633 [Selaginella moellendorffii]
gi|300167175|gb|EFJ33780.1| hypothetical protein SELMODRAFT_20633 [Selaginella moellendorffii]
Length = 604
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 163/569 (28%), Positives = 275/569 (48%), Gaps = 93/569 (16%)
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
++++SW +M+ SQ+ + ++L+ +M V P T+ SI+ ACS + + LG+++
Sbjct: 2 KDLISWNSMVVAYSQHGHGEEMLELFRKM---DVEPDSITYASILGACSAMELLELGKEV 58
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI--------------------- 197
HA V +S S ALI MY+K + AR VF GI
Sbjct: 59 HARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGRA 118
Query: 198 ----------------------------ARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
+K VT+W +MI+++++ G ++L F++M
Sbjct: 119 REALGLFERMKAESVRIDKASRSNFDRMEKKSVTAWNAMISSYAQHGQASKSLLLFHQMS 178
Query: 230 HHGAYQPNEFIFGSVFSACSNF-------------------------------------A 252
G +P+ F SV ACS+ A
Sbjct: 179 LEGV-KPDARTFVSVIGACSSLQALEKGRAVEEQATSMGIEEGRTALLSLYAKCGNLEAA 237
Query: 253 RILFNEID-SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
R +F+++ ++ SWN++IA A EA+ L+ M++ + PD +T L AC
Sbjct: 238 RDIFDKLKYRKNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTS 297
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+G+++HS I + ++V + AI+ MYAKC L A+ F+++ + ++V+W++
Sbjct: 298 YGGSAKGVEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKM-RRKNAVTWSA 356
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT- 430
++ A +QH E L+ RM++ +P IT + AC+++ +L+ +H I T
Sbjct: 357 MVGAFIQHGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATE 416
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
L +F+ N L+++Y KCG L A +F+ ++ D SW+++I+G+A G DE L L
Sbjct: 417 TLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLH 476
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
M GV P+ VT VL ACSH GL++ G + ME E+G+ EH C+VDLL+R
Sbjct: 477 GEMVQDGVDPDYVTFACVLLACSHAGLLDRGRSHFLSMEMEFGVAHDTEHYLCMVDLLSR 536
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
AG V AE+ ++ M + + W +LL S
Sbjct: 537 AGRVESAEELVHSMPYEPPAMGWTTLLGS 565
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 164/543 (30%), Positives = 266/543 (48%), Gaps = 53/543 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY +IS S RKV + + D++ N +L+ Y K G+L AR F++M
Sbjct: 93 TYNAMISGYLSNNKFDCARKVFEKM----PDRDLISWNVMLSGYVKNGNLSAARALFNQM 148
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+++VVSW AM++G +QN +A K++ QML + + ++ ++ A G + R
Sbjct: 149 PEKDVVSWNAMLSGFAQNGFVEEARKIFDQML----VKNEISWNGLLSAYVQNGRIEDAR 204
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+L S+ +++ N L+ Y + R+ DAR++F + +D SW MI +++ G
Sbjct: 205 RL----FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNG 260
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVAS 276
EA F E+ + + G V + + A +F E+ + SWNA+IAG
Sbjct: 261 LLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQ 320
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
+A LF +M R N
Sbjct: 321 SQQIEKARELFDQMPSR---------------------------------------NTSS 341
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
N ++T YA+C + A ++F E+ + D +SW ++I+ Q Q+EE LF +M
Sbjct: 342 WNTMVTGYAQCGNIDQAKILFDEMPQR-DCISWAAMISGYAQSGQSEEALHLFIKMKRDG 400
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
+ + +CA++A+LE+ QLH + K G N L+ +Y KCGS+ A
Sbjct: 401 GILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAF 460
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
+F + D+VSW+++I GYA+ G G EAL LF M+ + + P+ VTLVGVL+ACSH G
Sbjct: 461 DVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSHTG 519
Query: 517 LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
LV++G+ + M YGI +H +C++DLL RAG + EA + + M D W +L
Sbjct: 520 LVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGAL 579
Query: 577 LAS 579
L +
Sbjct: 580 LGA 582
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 202/448 (45%), Gaps = 71/448 (15%)
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
L+++N S I D+ W I+A+ + G AL FN M N I G + +
Sbjct: 46 LESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNN 105
Query: 248 CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE------------- 294
+ AR +F ++ DL SWN +++G + N + A +LF++M +++
Sbjct: 106 KFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQ 165
Query: 295 --------------LLPDGLTVHSLLCACI--GRLT----LYQGMQ----------VHSY 324
L+ + ++ + LL A + GR+ L+ + Y
Sbjct: 166 NGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGY 225
Query: 325 IIKMGFD------SNVPV-----CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
+ K D +PV N ++T YA+ +L A +F+EL D +W +++
Sbjct: 226 VRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIR-DVFAWTAMV 284
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
+ +Q+ +E R+F M + + +++N ++ + +E +L + +
Sbjct: 285 SGFVQNGMLDEATRIFEEM----PEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTS 340
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
N ++ Y +CG++ A+ LF+ M D +SW+++I GYAQ G +EAL LF +M
Sbjct: 341 ----SWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKM 396
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEY--GIIPTREHCSCVVDLLAR 550
+ G N L L++C+ + +E G L+ R+++ + G I + ++ + +
Sbjct: 397 KRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAG----NALLAMYGK 452
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLA 578
G + EA D + + DIV W +++A
Sbjct: 453 CGSIEEAFDVFEDI-TEKDIVSWNTMIA 479
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 98/182 (53%), Gaps = 11/182 (6%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S A +S+C+ + +L+LG+++H ++ + Q + N +L MYGKCGS+E+A F+
Sbjct: 406 SALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFED 465
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ ++++VSW MIAG +++ +A+ L+ M + + P T ++ ACS G V G
Sbjct: 466 ITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKG 524
Query: 156 RQLHAHVIKSEHGSHLIAQNA-----LIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMI 209
+ S + ++ I NA +I + + R+ +A N+ + D +WG+++
Sbjct: 525 MEY----FNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALL 580
Query: 210 AA 211
A
Sbjct: 581 GA 582
>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
Length = 697
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 154/536 (28%), Positives = 256/536 (47%), Gaps = 43/536 (8%)
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS--GVMPGQFTFGS 141
G L AR FDKMP+R++ SWTA++ G + +A+ L+ M GV +
Sbjct: 42 GKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLSV 101
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
+KAC ++ G LHA+ K+ S + +AL+ MY + +I + VF+ + ++
Sbjct: 102 ALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFRN 161
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------- 254
+W + I G E L +F++M + F F AC++ ++
Sbjct: 162 SVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIH 221
Query: 255 ---------------------------------LFNEIDSPDLASWNALIAGVASHSNAN 281
LF + D+ W +LI
Sbjct: 222 THVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQEE 281
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
+A++ F MR+ ++ P+ T S AC L G Q+H + +G ++ V N+++
Sbjct: 282 KAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSMM 341
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
MY+ C+ L +A ++F+ + + D +SW++II Q EE F+ FS M + +P
Sbjct: 342 KMYSTCAKLDSASVLFQGM-RCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQPTD 400
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
++ MA LE Q+H GL + + + L+++Y KCGS+ A K+F
Sbjct: 401 FALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIEASKVFEE 460
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
+ D+VS +++I GYA+ G +EA+ LF + L P+ VT + VLTACSH G ++ G
Sbjct: 461 KDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACSHSGQLDLG 520
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ +M+ Y + P +EH C+VDLL RAG +++AE IN+M D VVW +LL
Sbjct: 521 FQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLL 576
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/537 (26%), Positives = 243/537 (45%), Gaps = 47/537 (8%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+ AC ++ G +H + + V + + +L+MY + G ++ + F +MP RN
Sbjct: 103 LKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFRNS 162
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
V+WTA I G + ++ + QM + + F F +KAC+ L V GR++H
Sbjct: 163 VTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIHT 222
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
HVI + L N+L MYT+ + D +F ++ +DV W S+I A+ ++G E +
Sbjct: 223 HVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQEEK 282
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE---------------------- 258
A+ F ++ + PNE F S F+AC++ +R+++ E
Sbjct: 283 AVNTF-LLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSMM 341
Query: 259 --------IDSP----------DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
+DS D+ SW+ +I G + + E FS MR P
Sbjct: 342 KMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQPTDF 401
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
+ SLL L QG QVH+ + +G + N + +A++ MY+KC + A VF+E
Sbjct: 402 ALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIEASKVFEEK 461
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
+ D VS ++I +H + EE LF + L +PD +TF V+ AC+ L++
Sbjct: 462 DRT-DIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACSHSGQLDLG 520
Query: 421 TQLHCYITKTGLAFDVFVMNGLM-DIYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYA 478
Q + + G M D+ + G L A K+ N M D V W++L+
Sbjct: 521 FQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLLRACK 580
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
+ G + + R+ L + + TLV + S G +E ++ + M+++ G+I
Sbjct: 581 EKGDVERGRRAAQRILELDPT-SFTTLVTLANIHSSTGNWKEAANVRKDMKSK-GVI 635
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 195/445 (43%), Gaps = 54/445 (12%)
Query: 5 YVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLIS--ACSSLRSLQLGRKVHDHIL 62
+++ L L+ E L FSQ + ++ T+A I+ AC+ LR ++ GR++H H++
Sbjct: 168 FITGLVHAGLHYEGLRY--FSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIHTHVI 225
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + + N + MY +CG ++D F+ M +R+VV WT++I + QE A+
Sbjct: 226 VKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQEEKAVN 285
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ M S V P + TF S AC+ L + G QLH +V G L N+++ MY+
Sbjct: 286 TFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSMMKMYS 345
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
++ A +F G+ +D+ SW ++I +S+ + E +F+ M G QP +F
Sbjct: 346 TCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGP-QPTDFALA 404
Query: 243 SV--------------------------------------FSACSNF--ARILFNEIDSP 262
S+ +S C + A +F E D
Sbjct: 405 SLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIEASKVFEEKDRT 464
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ S A+I G A H EA+ LF + PD +T S+L AC L G Q
Sbjct: 465 DIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACSHSGQLDLGFQ-- 522
Query: 323 SYIIKMGFDSNVPVCNA----ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
Y M + N+ ++ + + L +A + E+ D V W +++ AC +
Sbjct: 523 -YFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLLRACKE 581
Query: 379 HNQAEELFRLFSRMLASQIKPDHIT 403
E R R+L ++ P T
Sbjct: 582 KGDVERGRRAAQRIL--ELDPTSFT 604
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 168/586 (28%), Positives = 277/586 (47%), Gaps = 49/586 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
LI A L + G+++H H+L D+ ++N +L MY KCG+ +A F++M +R+
Sbjct: 45 LIKAFGGLYDVNKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERD 104
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQS--GVMPGQFTFGSIIKACSGLGSVCLGRQL 158
VSW MI+G Q+ ++ ++ +M++ G + + + +C+ + + G ++
Sbjct: 105 SVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEI 164
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI-----ARKDVTSWGSMIAAFS 213
H ++K S +ALI MY K I +A NVF I +++ W MI +
Sbjct: 165 HGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYV 224
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------- 254
AL F EML G P+ V CS +
Sbjct: 225 SNECLSLALELFVEMLELGI-SPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDV 283
Query: 255 ---------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
+F + +L W +++ A + NEA+ FSE
Sbjct: 284 RVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLD 343
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
PD + + + L AC +GM +H + IKMGFDS+V V A++ Y KC + A
Sbjct: 344 CGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYA 403
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
VF L D VSWN++I+ Q+ A+E + F M + QIKP+ +T ++ C
Sbjct: 404 QQVFYGLSTR-DLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTH 462
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
++ + + ++HCY+ + + V N L+ Y KCG + S+R +F + + V+W+S+
Sbjct: 463 LSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSI 522
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
+LG+ G DE F +M+ + P+ T +L++CSH G V+ G + M +Y
Sbjct: 523 LLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYN 582
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ P E +C+VDLL RAG +++A D I M C D +W SLLAS
Sbjct: 583 LEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLAS 628
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 222/459 (48%), Gaps = 48/459 (10%)
Query: 107 MIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTF-GSIIKACSGLGSVCLGRQLHAHVIKS 165
MI C+++ DAI++Y+ ++ G +F F +IKA GL V G+Q+H H++K
Sbjct: 9 MIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLLKF 68
Query: 166 EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHF 225
+ +N+L+ MY K +A ++F + +D SW +MI+ F + G +++L F
Sbjct: 69 GFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMF 128
Query: 226 NEM--------------------------LHHG----------AYQPNEFIF-------- 241
M L HG +EF+
Sbjct: 129 RRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYM 188
Query: 242 --GSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
G + +A + F RI NE+ ++A WN +I G S+ + A+ LF EM + + PD
Sbjct: 189 KCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDS 248
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
TV +L C L L G Q+H I+ +G D +V V A++ MY KC +L +FK
Sbjct: 249 STVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKR 308
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
+N + V W S++ C Q+ E FS + PD + + AC+ ++
Sbjct: 309 -SQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPR 367
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
+H + K G DVFV L+D Y KCG + A+++F + D+VSW++LI G+AQ
Sbjct: 368 GMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQ 427
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
C DEALK F M+S + PN VT+ +L+ C+H+ ++
Sbjct: 428 NKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVM 466
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 246/521 (47%), Gaps = 52/521 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYD--FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDH 60
N +S C+ Y ++LV + + + R + A L S+C+S++ L G ++H
Sbjct: 109 NTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAAL-SSCASIKCLTHGLEIHGF 167
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ-----RNVVSWTAMIAGCSQNY 115
++ D L + ++ MY KCG +++A F+++ RN+ W MI G N
Sbjct: 168 LVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNE 227
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+ A++L+++ML+ G+ P T ++ CS L + +G+Q+H ++ +
Sbjct: 228 CLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGT 287
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
AL+ MY K + +F ++ WGS++ ++ GY EAL F+E + +
Sbjct: 288 ALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGF- 346
Query: 236 PNEFIFGSVFSACS----------------------------------------NFARIL 255
P+ I + ACS +A+ +
Sbjct: 347 PDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQV 406
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F + + DL SWNALI+G A + A+EA+ F +M+ +++ P+ +T+ +L C +
Sbjct: 407 FYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVM 466
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
+VH Y+++ F++N V N++++ YAKC + ++ VF++L + V+WNSI+
Sbjct: 467 ILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVR-NEVTWNSILLG 525
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ-LHCYITKTGLAF 434
H + +E+F F +M + IKPDH TF ++ +C+ ++ + + + L
Sbjct: 526 FGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEP 585
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
V ++D+ + G+L A L M +PD W SL+
Sbjct: 586 RVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLL 626
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/456 (21%), Positives = 185/456 (40%), Gaps = 54/456 (11%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
ST ++ CS L L +G+++H IL DV + ++ MY KCG E + F +
Sbjct: 249 STVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKR 308
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
N+V W +++ C+QN N+A++ + + + P + ++ACS L G
Sbjct: 309 SQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRG 368
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+H IK S + AL+ Y K + A+ VF G++ +D+ SW ++I+ F++
Sbjct: 369 MAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQN 428
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA----------------------- 252
EAL F +M +PN + S C++ +
Sbjct: 429 KCADEALKAFRDM-QSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALV 487
Query: 253 -----------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
R +F ++ + +WN+++ G H +E + F +M++ +
Sbjct: 488 NNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANI 547
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
PD T SLL +C + G + +S + + V ++ + + L A
Sbjct: 548 KPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAY 607
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRLFS-----RMLASQIKPDHI 402
+ + + D W S++A+C H A +F L + R+L + + D
Sbjct: 608 DLIMSMPCSPDDRIWGSLLASCKNHGNTKLAEVVANHIFELDASSVGYRVLLANLYEDSG 667
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
N+V + + + Q C + + +FV
Sbjct: 668 NLNEVFRVRTDIKQMGLKKQPGCSWIEVDNSIHIFV 703
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 140/311 (45%), Gaps = 16/311 (5%)
Query: 10 CKQNLY-NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQP 68
C QN Y NEAL + + P + ACS L G +H +
Sbjct: 324 CAQNGYPNEALEFFSEFMLDCGFP-DPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDS 382
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
DV + +++ YGKCG +E A+ F + R++VSW A+I+G +QN ++A+K + M
Sbjct: 383 DVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQ 442
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
+ P T I+ C+ L + L +++H ++++ ++ + N+LI+ Y K I
Sbjct: 443 SKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIH 502
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
+R VF + ++ +W S++ F G E F +M +P+ F S+ S+C
Sbjct: 503 SSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKM-KEANIKPDHGTFTSLLSSC 561
Query: 249 SNFARI-----LFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
S+ ++ FN + P + + ++ + N N+A L M PD
Sbjct: 562 SHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSM---PCSPD 618
Query: 299 GLTVHSLLCAC 309
SLL +C
Sbjct: 619 DRIWGSLLASC 629
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 96/198 (48%), Gaps = 4/198 (2%)
Query: 370 NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND-VMGACAKMASLEMVTQLHCYIT 428
N +I C + E+ R++ + + F ++ A + + Q+H ++
Sbjct: 7 NRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLL 66
Query: 429 KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
K G D+FV N L+ +Y KCG+ G+A +F ME D VSW+++I G+ Q G ++L
Sbjct: 67 KFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLV 126
Query: 489 LFTRM--RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
+F RM G N V + L++C+ + + GL ++ + + G+ S +++
Sbjct: 127 MFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKK-GVDSDEFLVSALIE 185
Query: 547 LLARAGCVHEAEDFINQM 564
+ + G + AE+ ++
Sbjct: 186 MYMKCGDIKNAENVFERI 203
>gi|242043708|ref|XP_002459725.1| hypothetical protein SORBIDRAFT_02g009440 [Sorghum bicolor]
gi|241923102|gb|EER96246.1| hypothetical protein SORBIDRAFT_02g009440 [Sorghum bicolor]
Length = 691
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 150/463 (32%), Positives = 248/463 (53%), Gaps = 33/463 (7%)
Query: 104 WTAMIAGCSQNYQENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
+ +I+ C + A+ Y +M+ + V P FT+ +++AC+ ++ LGR +H
Sbjct: 126 YNVLISACLSHGLPRHALAAYQEMIDKDAVPPDAFTYPKVLRACAETANLALGRAVHVRA 185
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL 222
+ HL QNAL++MY K ++ AR VF G+ +DV SW SMI+ ++ G EA+
Sbjct: 186 ADAGMDGHLFCQNALVSMYAKCGDVVAARGVFEGMEHRDVVSWNSMISGYAASGQWREAV 245
Query: 223 CHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANE 282
F M GA E++S +WN + G +
Sbjct: 246 ELFRRMQAEGA------------------------EVNS---VTWNTIAGGYIQMHDYRA 278
Query: 283 AMSLFSEMRDRELLPDGLT--VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
A+ L +M D +T + S C+ G L L G ++H ++M V NA+
Sbjct: 279 AVGLIRDMVRGGASIDFVTLVIGSNACSRAGWLRL--GKEIHGLAVRMQCHEIDSVINAV 336
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+TMYA+C+ + +AL++F+ + + V+WN++IA + AE R+F M+ S ++P+
Sbjct: 337 ITMYARCNDMEHALMLFRMM-RCPGLVAWNTMIAGFALSDDAEAASRIFREMVCSDVQPN 395
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
++T + CA++A+L+ +LH +I K G + N L+D+Y K G L A+ +F+
Sbjct: 396 YVTVVTYLALCARVANLQHGRELHTHIIKQGFKGYRLLWNSLIDMYSKSGRLSVAQNVFD 455
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
M++ D++S++S+I G+ G G +L+ F RM G+ P+ + +V VL+ACSH GLV+E
Sbjct: 456 TMDDHDMISFTSMIAGFGMQGKGIVSLRFFKRMIDSGIMPDAIIMVTVLSACSHSGLVDE 515
Query: 521 GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
G L+ M YGI P EH SC+VDL ARAG + +AE+ +NQ
Sbjct: 516 GEELFDKMVKSYGIKPQMEHYSCMVDLYARAGLLEKAEELLNQ 558
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 111/208 (53%), Gaps = 1/208 (0%)
Query: 43 SACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVV 102
+ACS L+LG+++H + +C + N ++ MY +C +E A M F M +V
Sbjct: 303 NACSRAGWLRLGKEIHGLAVRMQCHEIDSVINAVITMYARCNDMEHALMLFRMMRCPGLV 362
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
+W MIAG + + A +++ +M+ S V P T + + C+ + ++ GR+LH H+
Sbjct: 363 AWNTMIAGFALSDDAEAASRIFREMVCSDVQPNYVTVVTYLALCARVANLQHGRELHTHI 422
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL 222
IK + + N+LI MY+K R+ A+NVF + D+ S+ SMIA F G + +L
Sbjct: 423 IKQGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDHDMISFTSMIAGFGMQGKGIVSL 482
Query: 223 CHFNEMLHHGAYQPNEFIFGSVFSACSN 250
F M+ G P+ I +V SACS+
Sbjct: 483 RFFKRMIDSG-IMPDAIIMVTVLSACSH 509
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 185/454 (40%), Gaps = 77/454 (16%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S+ L AL AY + + TY ++ AC+ +L LGR VH
Sbjct: 127 NVLISACLSHGLPRHALAAYQEMIDKDAVPPDAFTYPKVLRACAETANLALGRAVHVRAA 186
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + QN +++MY KCG + AR F+ M R+VVSW +MI+G + + Q +A++
Sbjct: 187 DAGMDGHLFCQNALVSMYAKCGDVVAARGVFEGMEHRDVVSWNSMISGYAASGQWREAVE 246
Query: 123 LYIQMLQSGVMPGQFTFGSII-----------------------------------KACS 147
L+ +M G T+ +I ACS
Sbjct: 247 LFRRMQAEGAEVNSVTWNTIAGGYIQMHDYRAAVGLIRDMVRGGASIDFVTLVIGSNACS 306
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
G + LG+++H ++ + NA+I MY + + + A +F + + +W +
Sbjct: 307 RAGWLRLGKEIHGLAVRMQCHEIDSVINAVITMYARCNDMEHALMLFRMMRCPGLVAWNT 366
Query: 208 MIAAF---------SKLGYELE---------------ALCHFNEMLHHG----------A 233
MIA F S++ E+ ALC L HG
Sbjct: 367 MIAGFALSDDAEAASRIFREMVCSDVQPNYVTVVTYLALCARVANLQHGRELHTHIIKQG 426
Query: 234 YQPNEFIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
++ ++ S+ S R+ +F+ +D D+ S+ ++IAG ++ F
Sbjct: 427 FKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDHDMISFTSMIAGFGMQGKGIVSLRFFK 486
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKC 347
M D ++PD + + ++L AC + +G ++ ++K G + + ++ +YA+
Sbjct: 487 RMIDSGIMPDAIIMVTVLSACSHSGLVDEGEELFDKMVKSYGIKPQMEHYSCMVDLYARA 546
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
+L A + + S +++ AC H Q
Sbjct: 547 GLLEKAEELLNQTPFPPTSTMVAALVGAC--HEQ 578
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 165/584 (28%), Positives = 269/584 (46%), Gaps = 111/584 (19%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
+ TY+ ++ C+ +SL G+KVH I + D VL ++++Y CG L++ R
Sbjct: 97 LETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRV 156
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FD M ++NV W M++ ++ ++I L+ M++ G+ G+
Sbjct: 157 FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI-EGK---------------- 199
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
+ E S L FD++ D +DV SW SMI+ +
Sbjct: 200 -----------RPESASEL------------FDKLCD----------RDVISWNSMISGY 226
Query: 213 SKLGYELEALCHFNEMLHHG-----------------------AYQPNEFIFGSVFSACS 249
G L + +M++ G + S F
Sbjct: 227 VSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRI 286
Query: 250 NFARIL----------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
NF+ L F ++ ++ SW ++IAG ++ A+ L +M
Sbjct: 287 NFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKE 346
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ D + S+L AC +L G VH YI +SN+ VCNA++ MY KC + A
Sbjct: 347 GVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGA 406
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
VF + D +SWN++I ++KPD T ++ ACA
Sbjct: 407 NSVFSTMVVK-DIISWNTMIG---------------------ELKPDSRTMACILPACAS 444
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+++LE ++H YI + G + D V N L+D+Y+KCG LG AR LF+ + + D+VSW+ +
Sbjct: 445 LSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVM 504
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I GY G G+EA+ F MR G+ P+ V+ + +L ACSH GL+E+G + IM+N++
Sbjct: 505 ISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFN 564
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
I P EH +C+VDLL+R G + +A +FI + D +W +LL
Sbjct: 565 IEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALL 608
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 210/425 (49%), Gaps = 28/425 (6%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I + +T ++ C++ +L LG+ VH + S + + N +L+MY KCG L+ A
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGAL 306
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F+KM +RNVVSWT+MIAG +++ + + AI+L QM + GV SI+ AC+ G
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSG 366
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
S+ G+ +H ++ + S+L NAL+ MYTK + A +VFS + KD+ SW +MI
Sbjct: 367 SLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIG 426
Query: 211 AFSKLGY----------ELEALCHFNEMLHHG-----AYQPNEFIFGS---VFSACS--N 250
L AL E+ HG Y + + + ++ C
Sbjct: 427 ELKPDSRTMACILPACASLSALERGKEI--HGYILRNGYSSDRHVANALVDLYVKCGVLG 484
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
AR+LF+ I S DL SW +I+G H NEA++ F+EMRD + PD ++ S+L AC
Sbjct: 485 LARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 544
Query: 311 GRLTLYQGMQVHSYIIKMGF--DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS 368
L QG + YI+K F + + ++ + ++ L A + L D+
Sbjct: 545 HSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATI 603
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC-AKMASLEMVTQLHCYI 427
W +++ C ++ E ++ R+ +++P++ + ++ A+ E V ++ I
Sbjct: 604 WGALLCGCRIYHDIELAEKVAERVF--ELEPENTGYYVLLANIYAEAEKWEEVKRMREKI 661
Query: 428 TKTGL 432
K GL
Sbjct: 662 GKKGL 666
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 167/392 (42%), Gaps = 61/392 (15%)
Query: 241 FGSVFSACSNFARILFNEIDSPD--LASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
F +FS+C RI + D + +NA I N AM L + EL +
Sbjct: 42 FSPIFSSCLPI-RISATPTRTIDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSEL--E 98
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYI------------------------IKMG---FD 331
T S+L C G +L G +VHS I +K G FD
Sbjct: 99 TKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFD 158
Query: 332 S----NVPVCNAILTMYAKCSVLCNALLVFKEL------GKNADS-------------VS 368
+ NV + N +++ YAK ++ +FK + GK +S +S
Sbjct: 159 TMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVIS 218
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
WNS+I+ + + E ++ +M+ I D T V+ CA +L + +H
Sbjct: 219 WNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAI 278
Query: 429 KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
K+ + N L+D+Y KCG L A ++F M +VVSW+S+I GY + G D A++
Sbjct: 279 KSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIR 338
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVD 546
L +M GV ++V +L AC+ G ++ G +H Y N + C+ ++D
Sbjct: 339 LLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFV---CNALMD 395
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ + G + A + M DI+ W +++
Sbjct: 396 MYTKCGSMDGANSVFSTMVV-KDIISWNTMIG 426
>gi|6735376|emb|CAB68197.1| putative protein [Arabidopsis thaliana]
Length = 810
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 179/615 (29%), Positives = 297/615 (48%), Gaps = 82/615 (13%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHIL-LSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
ST +GL+S C+SL ++ G ++H L D + +L +YG+ LE A F+
Sbjct: 185 STVSGLLS-CASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFE 242
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
MP +++ +W M++ + + + ++++ G + +F ++K S + + +
Sbjct: 243 DMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDI 302
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
+QLH K + N+LI+ Y K A +F D+ SW ++I A +K
Sbjct: 303 SKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAK 362
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSV------------------------------ 244
L+AL F M HG + PN+ + SV
Sbjct: 363 SENPLKALKLFVSMPEHG-FSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIV 421
Query: 245 --------FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
++ C N +R+ F+ I ++ WNAL++G A + + +SLF +M
Sbjct: 422 LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMG 480
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
P T + L +C + + Q+HS I++MG++ N V ++++ YAK ++ +AL
Sbjct: 481 FRPTEYTFSTALKSC----CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDAL 536
Query: 355 L-------------------VFKELGK------------NADSVSWNSIIAACLQHNQAE 383
L ++ G+ D+VSWN IAAC + + E
Sbjct: 537 LLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHE 596
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA-FDVFVMNGL 442
E+ LF ML S I+PD TF ++ C+K+ L + + +H ITKT + D FV N L
Sbjct: 597 EVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVL 656
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y KCGS+ S K+F ++++W++LI G G EAL+ F SLG P+
Sbjct: 657 IDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDR 716
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
V+ + +LTAC H G+V+EG+ L++ M+ +YG+ P +H C VDLLAR G + EAE I
Sbjct: 717 VSFISILTACRHGGMVKEGMGLFQKMK-DYGVEPEMDHYRCAVDLLARNGYLKEAEHLIR 775
Query: 563 QMACDADIVVWKSLL 577
+M AD VW++ L
Sbjct: 776 EMPFPADAPVWRTFL 790
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 147/657 (22%), Positives = 274/657 (41%), Gaps = 100/657 (15%)
Query: 9 LCKQNLYNEA---------LVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHD 59
+ +NL+NE +V++ S + ++ L++ C S + +H
Sbjct: 46 MVNENLFNETVKILKPLEDMVSFCMSLSCGDLANHNDRVVSLLNVCRKAPSFARTKALH- 104
Query: 60 HILLSKC----QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
+ ++ C QP V + N+I+++Y K G + A FD+MP+RN VS+ +I G S+
Sbjct: 105 ALSITLCSVLLQP-VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYG 163
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG---SHLI 172
+ A ++ +M G +P Q T ++ +C+ L V G QLH +K +G +
Sbjct: 164 DVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASL-DVRAGTQLHGLSLK--YGLFMADAF 219
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
L+ +Y + D + A VF + K + +W M++ G+ E + F E++ G
Sbjct: 220 VGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMG 279
Query: 233 AYQPNEFIFG-------------------------------------SVFSACSN--FAR 253
A G S + C N A
Sbjct: 280 ASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAE 339
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
+F + S D+ SWNA+I A N +A+ LF M + P+ T S+L
Sbjct: 340 RMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQ 399
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
L G Q+H +IK G ++ + + NA++ YAKC L ++ L F + ++ + V WN+++
Sbjct: 400 LLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYI-RDKNIVCWNALL 458
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
+ + LF +ML +P TF+ + +C + + QLH I + G
Sbjct: 459 SG-YANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYE 513
Query: 434 FDVFVMNGLM--------------------------------DIYIKCGSLGSARKLFNF 461
+ +V++ LM IY + G + KL +
Sbjct: 514 DNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLIST 573
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
+E PD VSW+ I ++ +E ++LF M + P+ T V +L+ CS + + G
Sbjct: 574 LEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLG 633
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++ ++ C+ ++D+ + G + + + +++ W +L++
Sbjct: 634 SSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETR-EKNLITWTALIS 689
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 175/416 (42%), Gaps = 85/416 (20%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY ++ S ++ L GR++H ++ + C+ +VL N +++ Y KCG+LED+R+ FD +
Sbjct: 387 TYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYI 446
Query: 97 PQRNVVSWTAMIAGCSQNYQENDA---IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
+N+V W A+++G Y D + L++QMLQ G P ++TF + +K+C V
Sbjct: 447 RDKNIVCWNALLSG----YANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC----VT 498
Query: 154 LGRQLHAHVIK--------------------------------SEHGSHLIAQNALIAMY 181
+QLH+ +++ + + ++ N + +Y
Sbjct: 499 ELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIY 558
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
++ + ++ + S + + D SW IAA S+ Y E + F ML +P+++ F
Sbjct: 559 SRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNI-RPDKYTF 617
Query: 242 GSVFSACSNFARI-----------------------------------------LFNEID 260
S+ S CS + +F E
Sbjct: 618 VSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETR 677
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+L +W ALI+ + H EA+ F E PD ++ S+L AC + +GM
Sbjct: 678 EKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMG 737
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+ + G + + + + A+ L A + +E+ AD+ W + + C
Sbjct: 738 LFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 793
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 1/150 (0%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQ-P 68
C ++ Y+E ++ +NIR T+ ++S CS L L LG +H I +
Sbjct: 589 CSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCA 648
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D + N +++MYGKCGS+ F++ ++N+++WTA+I+ + +A++ + + L
Sbjct: 649 DTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETL 708
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
G P + +F SI+ AC G V G L
Sbjct: 709 SLGFKPDRVSFISILTACRHGGMVKEGMGL 738
>gi|297798028|ref|XP_002866898.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312734|gb|EFH43157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 742
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 169/552 (30%), Positives = 277/552 (50%), Gaps = 23/552 (4%)
Query: 41 LISACSSLRSLQLGRKVHDHILL-SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR 99
++SAC+ L +G VH +L + + + + Y KCG L+DA + FD+MP+R
Sbjct: 136 VVSACAELLWFDVGSFVHGFVLKHGGFERNTAVGASFVYFYSKCGFLQDACLVFDEMPER 195
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV---MPGQFTFGSIIKACSGLGSVCLGR 156
+VV+WTA+I+G QN + A+ +M G P T +ACS LG++ GR
Sbjct: 196 DVVAWTAIISGHVQNRESERALGYLCKMHTVGSDVDKPNPRTLECGFQACSNLGALKEGR 255
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
LH +K+ S + Q+++ ++Y+K +A F + +D+ SW S+IA+ + G
Sbjct: 256 CLHGFAVKNGLASSNVVQSSIFSLYSKSGNPAEAYLSFRELGDQDMFSWTSIIASLVRSG 315
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNEIDSPDLASW 267
E+ F EM + G QP+ + + S F + S D
Sbjct: 316 NVEESFDMFWEMQNKGM-QPDGIVISCLISELGKKMLVPEGKAFHGFVIRHCFSLDSTVC 374
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
N+L++ + A LF ++ + + + G + L G +H Y++K
Sbjct: 375 NSLLSMYCKFEFLSVAEKLFCKISEE----GNTEAWNTMLKGYGAVLL--GKSLHCYVVK 428
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
D + V N+++ +Y K L A +F E N V+WN++IA+ + Q ++
Sbjct: 429 TSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNI--VTWNAMIASYVYCEQPDKAIA 486
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
LF RM++ KP IT ++ ACA SLE +H YI +T ++ + L+D+Y
Sbjct: 487 LFDRMVSENFKPSSITLVTLLMACANTGSLERGQMIHRYIIETEHEMNLSLSTALIDMYA 546
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
KCG L +R+LF+ D V W+ +I GY G + A+ LF +M V P T +
Sbjct: 547 KCGHLEKSRELFDAASQKDAVCWNVMISGYGMHGHVESAIALFDQMEESDVKPTGPTFLA 606
Query: 508 VLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
+L+AC+H GLVE G +L+ M ++Y + P +H SC+VDLL+R+G + EAE + M
Sbjct: 607 LLSACTHAGLVEHGKNLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLQEAETTVMSMPFS 665
Query: 568 ADIVVWKSLLAS 579
D V+W +LL+S
Sbjct: 666 PDGVIWGTLLSS 677
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/502 (19%), Positives = 198/502 (39%), Gaps = 116/502 (23%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+ P T ACS+L +L+ GR +H + + V+Q+ I ++Y K G+ +A +
Sbjct: 232 KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSNVVQSSIFSLYSKSGNPAEAYL 291
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG-------------------- 131
F ++ +++ SWT++IA ++ ++ ++ +M G
Sbjct: 292 SFRELGDQDMFSWTSIIASLVRSGNVEESFDMFWEMQNKGMQPDGIVISCLISELGKKML 351
Query: 132 VMPGQFTFGSIIKAC--------------------------------------------S 147
V G+ G +I+ C
Sbjct: 352 VPEGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFEFLSVAEKLFCKISEEGNTEAWNTMLK 411
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
G G+V LG+ LH +V+K+ + N+LI +Y K + A +F A ++ +W +
Sbjct: 412 GYGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNIVTWNA 470
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------- 251
MIA++ +A+ F+ M+ ++P+ ++ AC+N
Sbjct: 471 MIASYVYCEQPDKAIALFDRMVSEN-FKPSSITLVTLLMACANTGSLERGQMIHRYIIET 529
Query: 252 ------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
+R LF+ D WN +I+G H + A++LF
Sbjct: 530 EHEMNLSLSTALIDMYAKCGHLEKSRELFDAASQKDAVCWNVMISGYGMHGHVESAIALF 589
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQG----MQVHSYIIKMGFDSNVPVCNAILTM 343
+M + ++ P G T +LL AC + G +++H Y +K N+ + ++ +
Sbjct: 590 DQMEESDVKPTGPTFLALLSACTHAGLVEHGKNLFLKMHQYDVK----PNLKHYSCLVDL 645
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD--H 401
++ L A + + D V W +++++C+ H + E R+ R +AS + D +
Sbjct: 646 LSRSGNLQEAETTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMADRAVASDPQNDGYY 705
Query: 402 ITFNDVMGACAKMASLEMVTQL 423
I ++ A K E ++
Sbjct: 706 IMLANMYSAAGKWEQAERAREM 727
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 106/203 (52%), Gaps = 4/203 (1%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
C+Q ++A+ +D + N + T L+ AC++ SL+ G+ +H +I+ ++ + +
Sbjct: 478 CEQP--DKAIALFD-RMVSENFKPSSITLVTLLMACANTGSLERGQMIHRYIIETEHEMN 534
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
+ L +++MY KCG LE +R FD Q++ V W MI+G + AI L+ QM +
Sbjct: 535 LSLSTALIDMYAKCGHLEKSRELFDAASQKDAVCWNVMISGYGMHGHVESAIALFDQMEE 594
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD 189
S V P TF +++ AC+ G V G+ L + + + +L + L+ + ++ + +
Sbjct: 595 SDVKPTGPTFLALLSACTHAGLVEHGKNLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLQE 654
Query: 190 AR-NVFSGIARKDVTSWGSMIAA 211
A V S D WG+++++
Sbjct: 655 AETTVMSMPFSPDGVIWGTLLSS 677
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 5/170 (2%)
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
C + SLE + + + I G + ++FV + L+ Y G + ++F+ + DV W
Sbjct: 39 CDQSLSLESLRKHNALIITGGNSENIFVASKLISSYASYGKPNLSSRVFDLVTRRDVFLW 98
Query: 471 SSLILGYAQFGCGDEA--LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
+S+I A F GD A L F M G SP+ T V++AC+ + + G ++ +
Sbjct: 99 NSII--KAHFSNGDYARSLGFFFSMLLSGQSPDHFTAPMVVSACAELLWFDVGSFVHGFV 156
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G + V ++ G + +A ++M + D+V W ++++
Sbjct: 157 LKHGGFERNTAVGASFVYFYSKCGFLQDACLVFDEMP-ERDVVAWTAIIS 205
>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 692
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 167/590 (28%), Positives = 287/590 (48%), Gaps = 48/590 (8%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLS-KCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
+++A L+ S +L R++H +L+ + VL +++ Y + G A D
Sbjct: 40 ASHASLLLRLRSCPTLAEARRLHAALLVGGHHRRGAVLAAQLVHAYARLGEAGRALSVLD 99
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGSVC 153
MP RN +W A I G + Q +A++ Y M++ G V FT+ +IKAC+ LG V
Sbjct: 100 GMPMRNSFAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVE 159
Query: 154 LGR----QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
GR + A V++ + Q AL+ M+ K + +AR+VF + +D+ +W +MI
Sbjct: 160 QGRMVRENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMI 219
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------- 250
G L+A+ F+ M G + + I +V AC
Sbjct: 220 GGAVHAGDWLDAMSLFSRMRSEG-FLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGV 278
Query: 251 ---------------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
A +F I D+ SW+ LIAG + + + +++LF+E
Sbjct: 279 GDDTCVSNALVDMYCKCGCLGMADRVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTE 338
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M L P+ T+ S+L + G ++H + ++ GFD + + +A + Y++
Sbjct: 339 MVTAGLKPNSNTMASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGS 398
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ A +V EL D V WNS++A + + F + +PDH+T V+
Sbjct: 399 IREAEIVL-ELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLP 457
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
C + L +LH Y+ + ++ V N L+D+Y KC L +++F + + D +
Sbjct: 458 VCNHHSRLIQGKELHAYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEIFQLVTDRDTAT 517
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
+++LI + + G DEA+ LF M+ G++P+ VT V +L++CSH GL+E+GLH Y IM
Sbjct: 518 YNTLISSFGKHGHEDEAIMLFDLMKRDGIAPDKVTFVALLSSCSHAGLIEKGLHFYDIML 577
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+Y I P +EH SCVVDL +R+G + +A F++ + +A+I V LL +
Sbjct: 578 QDYNISPGKEHYSCVVDLYSRSGKLDDAWKFVSSLQDEAEIDVLGCLLGA 627
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/521 (25%), Positives = 233/521 (44%), Gaps = 51/521 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI- 61
N + L + EAL Y + ++ TY +I AC++L ++ GR V +++
Sbjct: 110 NAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRMVRENVE 169
Query: 62 ---LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
+ P V +Q +++M+ KCG L +AR F+ M +R++ +WTAMI G
Sbjct: 170 ADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDWL 229
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
DA+ L+ +M G + ++I AC + G LH ++ G NAL+
Sbjct: 230 DAMSLFSRMRSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNALV 289
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
MY K + A VF I KDV SW ++IA +S+ G + ++ F EM+ G +PN
Sbjct: 290 DMYCKCGCLGMADRVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAG-LKPNS 348
Query: 239 FIFGSVFSACSNF----------------------------------------ARILFNE 258
S+ + S A I+
Sbjct: 349 NTMASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLEL 408
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ DL WN+++AG A + N + A+ F ++ PD +TV S+L C L QG
Sbjct: 409 MPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQG 468
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
++H+Y+++ S V NA++ MY KC L +F +L + D+ ++N++I++ +
Sbjct: 469 KELHAYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEIF-QLVTDRDTATYNTLISSFGK 527
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY---ITKTGLAFD 435
H +E LF M I PD +TF ++ +C+ +E LH Y + ++
Sbjct: 528 HGHEDEAIMLFDLMKRDGIAPDKVTFVALLSSCSHAGLIE--KGLHFYDIMLQDYNISPG 585
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
+ ++D+Y + G L A K + +++ + +LG
Sbjct: 586 KEHYSCVVDLYSRSGKLDDAWKFVSSLQDEAEIDVLGCLLG 626
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 154/331 (46%), Gaps = 26/331 (7%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVL 72
NL+ E + A +NT I PS S ++ + G+++H L + L
Sbjct: 334 NLFTEMVTAGLKPNSNTMASILPSL--------SEMKLFRHGKEIHGFSLRNGFDQSKFL 385
Query: 73 QNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV 132
+ ++ Y + GS+ +A + + MP+R++V W +M+AG + N + A+ + + + G
Sbjct: 386 GSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGF 445
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
P T S++ C+ + G++LHA+V++ S NALI MY K + +
Sbjct: 446 RPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKE 505
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--- 249
+F + +D ++ ++I++F K G+E EA+ F+ M G P++ F ++ S+CS
Sbjct: 506 IFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDG-IAPDKVTFVALLSSCSHAG 564
Query: 250 ------NFARILFNEID-SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
+F I+ + + SP ++ ++ + ++A S ++D +
Sbjct: 565 LIEKGLHFYDIMLQDYNISPGKEHYSCVVDLYSRSGKLDDAWKFVSSLQDEAEI------ 618
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
+L +G ++ M + + K F+ N
Sbjct: 619 -DVLGCLLGACRVHNRMDIAELVAKRIFEQN 648
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/469 (31%), Positives = 248/469 (52%), Gaps = 46/469 (9%)
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK-DVTSWGSMIAAFS 213
G+++H++++ + + ++ +LI MY+K +++ A ++FS + +V ++ ++I+ F
Sbjct: 56 GKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFI 115
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------- 251
G+ E + +M + G P++F F AC +
Sbjct: 116 TNGFPEEGFEFYQKMRNEGVI-PDKFTFPCAIKACLDVLEIKKIHGLLFKFGLELDVFIG 174
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A++ F E+ D+ WNA++ G A + F M D ++
Sbjct: 175 SALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVV 234
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P TV +L L G +H + +KMG+DS V V N+++ MY KC + +AL +
Sbjct: 235 PSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEI 294
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F E+ + D SWNSI++ Q + RL RML + I+PD +T V+ AC+ +A+
Sbjct: 295 F-EMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAA 353
Query: 417 LEMVTQLHCYITKTGLAFD------VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
L ++H Y+ +GL D V + N ++D+Y KCGS+ A +F M N DV SW
Sbjct: 354 LMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASW 413
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
+ +I+GY G G+EAL++F+RM + + P+ VT VGVL+ACSH G V +G + M++
Sbjct: 414 NIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKS 473
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+Y + PT EH +CV+D+L RAG + EA + M +A+ VVW++LLA+
Sbjct: 474 KYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAA 522
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/521 (24%), Positives = 230/521 (44%), Gaps = 71/521 (13%)
Query: 14 LYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSL------RSLQLGRKVHDHILLSKCQ 67
L ++ + ++FS +T I+ Y L + +SL ++L G+++H ++L++
Sbjct: 11 LIKKSPLFFNFSSISTAIQSFQQPY-NLTTCIASLQASAHHKNLSKGKEIHSYMLINGFL 69
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGF-DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
+ ++NMY KC + A F D + NV ++ A+I+G N + + Y +
Sbjct: 70 NSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQK 129
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M GV+P +FTF IKAC + + +++H + K + +AL+ Y KF
Sbjct: 130 MRNEGVIPDKFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGL 186
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+ A+ F + +DV W +M+ ++++G + E + ++ + P+ F V S
Sbjct: 187 MEHAQVAFEELPIRDVVLWNAMVNGYAQIG-QFEMVLETFRRMNDESVVPSRFTVTGVLS 245
Query: 247 ACS-----NFARI-----------------------------------LFNEIDSPDLAS 266
+ N RI +F + D+ S
Sbjct: 246 VFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFS 305
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WN++++ + + + L M + PD +TV ++L AC L G ++H Y+I
Sbjct: 306 WNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMI 365
Query: 327 KMGFDS------NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
G +V + NA++ MYAKC + +A LVF+ + N D SWN +I H
Sbjct: 366 VSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERM-SNKDVASWNIMIMGYGMHG 424
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM- 439
E +FSRM Q+KPD +TF V+ AC+ V+Q ++ + +DV
Sbjct: 425 YGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAG---FVSQGRNFLVQMKSKYDVAPTI 481
Query: 440 ---NGLMDIYIKCGSLGSARKLFNFME---NPDVVSWSSLI 474
++D+ + G L A +L M NP V W +L+
Sbjct: 482 EHYTCVIDMLGRAGQLDEAYELALTMPIEANP--VVWRALL 520
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 199/449 (44%), Gaps = 65/449 (14%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
++F Q N + P T+ I AC L L++ +K+H + + DV + + ++N
Sbjct: 123 GFEFYQKMRNEGVIPDKFTFPCAIKAC--LDVLEI-KKIHGLLFKFGLELDVFIGSALVN 179
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
Y K G +E A++ F+++P R+VV W AM+ G +Q Q ++ + +M V+P +FT
Sbjct: 180 CYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFT 239
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
++ + +G + GR +H +K + S + N+LI MY K I DA +F +
Sbjct: 240 VTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR 299
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------- 251
KD+ SW S+++ + G L + ML G QP+ +V ACS+
Sbjct: 300 EKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGI-QPDLVTVTTVLPACSHLAALMHGR 358
Query: 252 ---------------------------------------ARILFNEIDSPDLASWNALIA 272
A ++F + + D+ASWN +I
Sbjct: 359 EIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIM 418
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G H NEA+ +FS M + +L PD +T +L AC + QG +++++M
Sbjct: 419 GYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQG---RNFLVQMKSKY 475
Query: 333 NVPVC----NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
+V ++ M + L A + + A+ V W +++AAC H A +
Sbjct: 476 DVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHA--VLAE 533
Query: 389 FSRMLASQIKPDH----ITFNDVMGACAK 413
+ +++P+H + ++V GA +
Sbjct: 534 VAAQRVFELEPEHCGSYVLMSNVYGAVGR 562
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 148/283 (52%), Gaps = 18/283 (6%)
Query: 306 LCACIGRL-------TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
L CI L L +G ++HSY++ GF ++ +++ MY+KC+ + AL +F
Sbjct: 37 LTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFS 96
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ + ++N+II+ + + EE F + +M + PD TF + AC + ++
Sbjct: 97 DPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIK 156
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
++H + K GL DVF+ + L++ Y+K G + A+ F + DVV W++++ GYA
Sbjct: 157 ---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYA 213
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRI-MENEYGII 535
Q G + L+ F RM V P+ T+ GVL+ + +G + G +H + + M + G+
Sbjct: 214 QIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVA 273
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ + ++D+ + C+ +A + I +M + DI W S+++
Sbjct: 274 VS----NSLIDMYGKCKCIEDALE-IFEMMREKDIFSWNSIVS 311
>gi|15229605|ref|NP_190543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183390|sp|Q9M2Y4.1|PP276_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49740
gi|6723419|emb|CAB66912.1| putative protein [Arabidopsis thaliana]
gi|332645063|gb|AEE78584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 737
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 173/559 (30%), Positives = 283/559 (50%), Gaps = 54/559 (9%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVS-WTAMIAGCSQNYQENDAIKLYI 125
+PDV +L+ K G +E A FDKMP+R+ V+ W AMI GC ++ +++L+
Sbjct: 120 EPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFR 179
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + GV +F F +I+ C GS+ G+Q+H+ VIK+ NALI MY
Sbjct: 180 EMHKLGVRHDKFGFATILSMCD-YGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQ 238
Query: 186 RILDARNVF--SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
++DA VF + +A +D ++ +I + + E+L F +ML + +P + F S
Sbjct: 239 VVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRD-ESLLVFRKML-EASLRPTDLTFVS 296
Query: 244 VFSACS-------------------------------------NFARILFNEIDSPDLAS 266
V +CS A +F ++ DL +
Sbjct: 297 VMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVT 356
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WN +I+ AMS++ M + PD T SLL + L V + II
Sbjct: 357 WNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE---MVQACII 413
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVF-KELGKNADSVSWNSIIAACLQHNQAEEL 385
K G S + + NA+++ Y+K + A L+F + L KN +SWN+II+ + E
Sbjct: 414 KFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNL--ISWNAIISGFYHNGFPFEG 471
Query: 386 FRLFSRMLASQIK--PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
FS +L S+++ PD T + ++ C +SL + +Q H Y+ + G + + N L+
Sbjct: 472 LERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALI 531
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNL 502
++Y +CG++ ++ ++FN M DVVSW+SLI Y++ G G+ A+ + M+ G V P+
Sbjct: 532 NMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDA 591
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF-- 560
T VL+ACSH GLVEEGL ++ M +G+I +H SC+VDLL RAG + EAE
Sbjct: 592 ATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVK 651
Query: 561 INQMACDADIVVWKSLLAS 579
I++ + + VW +L ++
Sbjct: 652 ISEKTIGSRVDVWWALFSA 670
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 220/474 (46%), Gaps = 44/474 (9%)
Query: 108 IAGCSQNYQENDAIKLYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE 166
+ G +++ + +A+KL+ + + + + P Q++ I L G Q+H + I+S
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
H N L+++Y + + + F I DV SW ++++A KLG A F+
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 227 EMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
+M P + D+A WNA+I G ++ L
Sbjct: 148 KM-------P-----------------------ERDDVAIWNAMITGCKESGYHETSVEL 177
Query: 287 FSEMRDRELLPDGLTVHSLLCAC-IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
F EM + D ++L C G L G QVHS +IK GF V NA++TMY
Sbjct: 178 FREMHKLGVRHDKFGFATILSMCDYGSLDF--GKQVHSLVIKAGFFIASSVVNALITMYF 235
Query: 346 KCSVLCNALLVFKELGKNA-DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
C V+ +A LVF+E D V++N +I + E L +F +ML + ++P +TF
Sbjct: 236 NCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDESLL-VFRKMLEASLRPTDLTF 294
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
VMG+C+ A M Q+H KTG V N M +Y G+A K+F +E
Sbjct: 295 VSVMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEE 351
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
D+V+W+++I Y Q G A+ ++ RM +GV P+ T G L A S L + L +
Sbjct: 352 KDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTF-GSLLATS---LDLDVLEM 407
Query: 525 YRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++G+ E + ++ ++ G + +A D + + + +++ W ++++
Sbjct: 408 VQACIIKFGLSSKIEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAIIS 460
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 188/419 (44%), Gaps = 62/419 (14%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP+ T+ ++ +CS +G +VH + + + ++ N + MY A
Sbjct: 287 LRPTDLTFVSVMGSCSCA---AMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAH 343
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F+ + ++++V+W MI+ +Q A+ +Y +M GV P +FTFGS++ L
Sbjct: 344 KVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLD 403
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ + A +IK S + NALI+ Y+K +I A +F RK++ SW ++I+
Sbjct: 404 VL---EMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIIS 460
Query: 211 AFSKLGYELEALCHFN-------------------------------------EMLHHGA 233
F G+ E L F+ +L HG
Sbjct: 461 GFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQ 520
Query: 234 YQPNEFIFG----SVFSACSNFARIL--FNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
++ E + G +++S C L FN++ D+ SWN+LI+ + H A++ +
Sbjct: 521 FK--ETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTY 578
Query: 288 SEMRDR-ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYA 345
M+D +++PD T ++L AC + +G+++ + +++ G NV + ++ +
Sbjct: 579 KTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLG 638
Query: 346 KCSVLCNALLVF----KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+ L A + K +G D W ++ +AC H +L ++ +++L + K D
Sbjct: 639 RAGHLDEAESLVKISEKTIGSRVD--VWWALFSACAAHGDL-KLGKMVAKLLMEKEKDD 694
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 129/252 (51%), Gaps = 10/252 (3%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N +SS + L A+ Y + I ++P T+ L++ L L++ V
Sbjct: 358 NTMISSYNQAKLGKSAMSVY---KRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQAC 411
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
I+ + + N +++ Y K G +E A + F++ ++N++SW A+I+G N +
Sbjct: 412 IIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEG 471
Query: 121 IKLYIQMLQSGV--MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
++ + +L+S V +P +T +++ C S+ LG Q HA+V++ + NALI
Sbjct: 472 LERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALI 531
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
MY++ I ++ VF+ ++ KDV SW S+I+A+S+ G A+ + M G P+
Sbjct: 532 NMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDA 591
Query: 239 FIFGSVFSACSN 250
F +V SACS+
Sbjct: 592 ATFSAVLSACSH 603
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 161/492 (32%), Positives = 244/492 (49%), Gaps = 72/492 (14%)
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
D + NV ++ A+I+G N + + Y +M GVMP +FTF IKAC
Sbjct: 97 DPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKAC------- 149
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
L IK HG + KF LD VF G A ++ +
Sbjct: 150 ----LDVLEIKKIHG-----------LLFKFGLELD---VFIGSA---------LVNCYL 182
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAG 273
K G ++ H A++ F E+ D+ WNA++ G
Sbjct: 183 KFG-----------LMEH--------------------AQVAFEELPIRDVVLWNAMVNG 211
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
A + F M D ++P TV L L G +H + +KMG+DS
Sbjct: 212 YAQIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSG 271
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
V V N+++ MY KC + +AL +F E+ + D SWNSI++ Q + RL RML
Sbjct: 272 VAVSNSLIDMYGKCKCIEDALEIF-EMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRML 330
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD------VFVMNGLMDIYI 447
+ I+PD +T V+ AC+ +A+L ++H Y+ +GL D V + N ++D+Y
Sbjct: 331 GAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYA 390
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
KCGS+ A +F M N DV SW+ +I+GY G G+EAL++F+RM + + P+ VT VG
Sbjct: 391 KCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVG 450
Query: 508 VLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
VL+ACSH G V +G + M+++Y + PT EH +CV+D+L RAG + EA + M +
Sbjct: 451 VLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIE 510
Query: 568 ADIVVWKSLLAS 579
A+ VVW++LLA+
Sbjct: 511 ANPVVWRALLAA 522
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 198/449 (44%), Gaps = 65/449 (14%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
++F Q N + P T+ I AC L L++ +K+H + + DV + + ++N
Sbjct: 123 GFEFYQKMRNEGVMPDKFTFPCAIKAC--LDVLEI-KKIHGLLFKFGLELDVFIGSALVN 179
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
Y K G +E A++ F+++P R+VV W AM+ G +Q Q ++ + +M V+P +FT
Sbjct: 180 CYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFT 239
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
+ + +G + GR +H +K + S + N+LI MY K I DA +F +
Sbjct: 240 VTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR 299
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------- 251
KD+ SW S+++ + G L + ML G QP+ +V ACS+
Sbjct: 300 EKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAG-IQPDLVTVTTVLPACSHLAALMHGR 358
Query: 252 ---------------------------------------ARILFNEIDSPDLASWNALIA 272
A ++F + + D+ASWN +I
Sbjct: 359 EIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIM 418
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G H NEA+ +FS M + +L PD +T +L AC + QG +++++M
Sbjct: 419 GYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQG---RNFLVQMKSKY 475
Query: 333 NVPVC----NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
+V ++ M + L A + + A+ V W +++AAC H A +
Sbjct: 476 DVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHA--VLAE 533
Query: 389 FSRMLASQIKPDH----ITFNDVMGACAK 413
+ +++P+H + ++V GA +
Sbjct: 534 VAAQRVFELEPEHCGSYVLMSNVYGAVGR 562
>gi|255586231|ref|XP_002533770.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526307|gb|EEF28615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 617
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 159/511 (31%), Positives = 270/511 (52%), Gaps = 27/511 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNI--RIRPS--TYAGLISACSSLRSLQLGRKVH 58
N+ +S+L + L +AL Y N I + P+ T A ++SAC +L +++ GRK H
Sbjct: 107 NNLISALVRGRLEQQALDVY-----NEMIWEGLMPTHFTLASILSACGTLLNMESGRKCH 161
Query: 59 DHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
I+ +V + N +L++Y KCG + DA F++M + N V++TAM++G +Q +
Sbjct: 162 TLIVKIGLDNNVYVSNALLSVYSKCGLVRDAVRLFEEMQEPNEVTYTAMMSGFTQTDRVV 221
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG-----------SVCLGRQLHAHVIKSEH 167
+A++++ M + G+ + S++ C+ G LG+ H IK
Sbjct: 222 EALEMFRLMCRQGICIDSVSLSSVLGVCTKGGCGESDQSDGSLRNALGKLAHGLAIKLGF 281
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
S L N+L+ MY K + A VF+ + V SW MIA + + +A+ +
Sbjct: 282 ESDLHLCNSLLDMYAKDGDMDSAEEVFANLPEMSVVSWNVMIAGYGQKCKSGKAIEYLQR 341
Query: 228 MLHHGAYQPNEFIFGSVFSACS-----NFARILFNEIDSPDLASWNALIAGVASHSNANE 282
M G ++P+E + ++ +AC R +F+ + P ++SWN +++G N NE
Sbjct: 342 MQSCG-FEPDEVTYINMLTACVRSGDIEIGRQIFDCMACPGVSSWNGMLSGYFQIENHNE 400
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
A+ LF EM+ + + PD T+ +L +C G L G QVH+ K F ++ V + ++
Sbjct: 401 AIKLFREMQFQNVKPDRTTLAIILSSCAGMELLEAGKQVHAISQKAAFHEDIYVASGLIG 460
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
MY+KC + A +FK++ K D+V WNS+IA ++ E F +M S + P
Sbjct: 461 MYSKCGKMDIADCIFKKISKQ-DTVCWNSMIAGLSLNSLDNEALAFFQQMRQSGMSPTQF 519
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
++ ++ CAK++SL Q+H I K G DV+V + L+D+Y KCG +G AR+ F+ M
Sbjct: 520 SYATILSCCAKLSSLIHGKQIHAQIAKEGFVNDVYVGSALVDMYCKCGEVGEARQFFDIM 579
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
+ + V+W+ +I GYAQ G G EA+ L+ M
Sbjct: 580 SSKNTVTWNEMIHGYAQNGHGHEAVCLYRDM 610
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/558 (24%), Positives = 232/558 (41%), Gaps = 96/558 (17%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N IL Y K G+L++A F +MP+RN+VSW +I+ + E A+ +Y +M+ G+M
Sbjct: 76 NAILTEYCKAGNLQNAHRLFSEMPERNIVSWNNLISALVRGRLEQQALDVYNEMIWEGLM 135
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK---------- 183
P FT SI+ AC L ++ GR+ H ++K +++ NAL+++Y+K
Sbjct: 136 PTHFTLASILSACGTLLNMESGRKCHTLIVKIGLDNNVYVSNALLSVYSKCGLVRDAVRL 195
Query: 184 ---------------------FDRILDARNVFSGIARKDV-------------------- 202
DR+++A +F + R+ +
Sbjct: 196 FEEMQEPNEVTYTAMMSGFTQTDRVVEALEMFRLMCRQGICIDSVSLSSVLGVCTKGGCG 255
Query: 203 ---TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEI 259
S GS+ A KL + L F LH N + + A +F +
Sbjct: 256 ESDQSDGSLRNALGKLAHGLAIKLGFESDLH----LCNSLLDMYAKDGDMDSAEEVFANL 311
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
+ SWN +IAG + +A+ M+ PD +T ++L AC+ + G
Sbjct: 312 PEMSVVSWNVMIAGYGQKCKSGKAIEYLQRMQSCGFEPDEVTYINMLTACVRSGDIEIGR 371
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
Q+ FD C + SWN +++ Q
Sbjct: 372 QI--------FD--CMACPGV--------------------------SSWNGMLSGYFQI 395
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
E +LF M +KPD T ++ +CA M LE Q+H K D++V
Sbjct: 396 ENHNEAIKLFREMQFQNVKPDRTTLAIILSSCAGMELLEAGKQVHAISQKAAFHEDIYVA 455
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
+GL+ +Y KCG + A +F + D V W+S+I G + +EAL F +MR G+S
Sbjct: 456 SGLIGMYSKCGKMDIADCIFKKISKQDTVCWNSMIAGLSLNSLDNEALAFFQQMRQSGMS 515
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
P + +L+ C+ + + G ++ + E G + S +VD+ + G V EA
Sbjct: 516 PTQFSYATILSCCAKLSSLIHGKQIHAQIAKE-GFVNDVYVGSALVDMYCKCGEVGEARQ 574
Query: 560 FINQMACDADIVVWKSLL 577
F + M+ + V W ++
Sbjct: 575 FFDIMS-SKNTVTWNEMI 591
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 193/401 (48%), Gaps = 43/401 (10%)
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
+++++C + G+ LHA + + + N LI Y K + A N+F +
Sbjct: 9 LANLLQSCIDKKAHLSGKLLHARIFRIGLSTDTFLLNRLIEFYFKCKNMGYAHNLFHQMP 68
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE 258
K++ SW +++ + K G L+ A LF+E
Sbjct: 69 HKNIYSWNAILTEYCKAG-NLQN------------------------------AHRLFSE 97
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ ++ SWN LI+ + +A+ +++EM L+P T+ S+L AC L + G
Sbjct: 98 MPERNIVSWNNLISALVRGRLEQQALDVYNEMIWEGLMPTHFTLASILSACGTLLNMESG 157
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
+ H+ I+K+G D+NV V NA+L++Y+KC ++ +A+ +F+E+ + + V++ ++++ Q
Sbjct: 158 RKCHTLIVKIGLDNNVYVSNALLSVYSKCGLVRDAVRLFEEM-QEPNEVTYTAMMSGFTQ 216
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE-----------MVTQLHCYI 427
++ E +F M I D ++ + V+G C K E + H
Sbjct: 217 TDRVVEALEMFRLMCRQGICIDSVSLSSVLGVCTKGGCGESDQSDGSLRNALGKLAHGLA 276
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K G D+ + N L+D+Y K G + SA ++F + VVSW+ +I GY Q +A+
Sbjct: 277 IKLGFESDLHLCNSLLDMYAKDGDMDSAEEVFANLPEMSVVSWNVMIAGYGQKCKSGKAI 336
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
+ RM+S G P+ VT + +LTAC G +E G ++ M
Sbjct: 337 EYLQRMQSCGFEPDEVTYINMLTACVRSGDIEIGRQIFDCM 377
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 125/216 (57%), Gaps = 1/216 (0%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
+NEA+ + Q N++ +T A ++S+C+ + L+ G++VH + D+ + +
Sbjct: 398 HNEAIKLFREMQFQ-NVKPDRTTLAIILSSCAGMELLEAGKQVHAISQKAAFHEDIYVAS 456
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
++ MY KCG ++ A F K+ +++ V W +MIAG S N +N+A+ + QM QSG+ P
Sbjct: 457 GLIGMYSKCGKMDIADCIFKKISKQDTVCWNSMIAGLSLNSLDNEALAFFQQMRQSGMSP 516
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
QF++ +I+ C+ L S+ G+Q+HA + K + + +AL+ MY K + +AR F
Sbjct: 517 TQFSYATILSCCAKLSSLIHGKQIHAQIAKEGFVNDVYVGSALVDMYCKCGEVGEARQFF 576
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
++ K+ +W MI +++ G+ EA+C + +M+
Sbjct: 577 DIMSSKNTVTWNEMIHGYAQNGHGHEAVCLYRDMIE 612
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 129/256 (50%), Gaps = 12/256 (4%)
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N+ NAILT Y K L NA +F E+ + + VSWN++I+A ++ ++ +++ M
Sbjct: 71 NIYSWNAILTEYCKAGNLQNAHRLFSEMPER-NIVSWNNLISALVRGRLEQQALDVYNEM 129
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
+ + P H T ++ AC + ++E + H I K GL +V+V N L+ +Y KCG +
Sbjct: 130 IWEGLMPTHFTLASILSACGTLLNMESGRKCHTLIVKIGLDNNVYVSNALLSVYSKCGLV 189
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
A +LF M+ P+ V++++++ G+ Q EAL++F M G+ + V+L VL C
Sbjct: 190 RDAVRLFEEMQEPNEVTYTAMMSGFTQTDRVVEALEMFRLMCRQGICIDSVSLSSVLGVC 249
Query: 513 SHVGLVEEGL----------HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
+ G E L + + G C+ ++D+ A+ G + AE+
Sbjct: 250 TKGGCGESDQSDGSLRNALGKLAHGLAIKLGFESDLHLCNSLLDMYAKDGDMDSAEEVFA 309
Query: 563 QMACDADIVVWKSLLA 578
+ + +V W ++A
Sbjct: 310 NLP-EMSVVSWNVMIA 324
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 73/132 (55%), Gaps = 5/132 (3%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N ++ L +L NEAL F Q + P+ +YA ++S C+ L SL G+++H
Sbjct: 487 NSMIAGLSLNSLDNEALA---FFQQMRQSGMSPTQFSYATILSCCAKLSSLIHGKQIHAQ 543
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
I DV + + +++MY KCG + +AR FD M +N V+W MI G +QN ++A
Sbjct: 544 IAKEGFVNDVYVGSALVDMYCKCGEVGEARQFFDIMSSKNTVTWNEMIHGYAQNGHGHEA 603
Query: 121 IKLYIQMLQSGV 132
+ LY M++S +
Sbjct: 604 VCLYRDMIESAI 615
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 65/115 (56%), Gaps = 5/115 (4%)
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGC 482
LH I + GL+ D F++N L++ Y KC ++G A LF+ M + ++ SW++++ Y + G
Sbjct: 28 LHARIFRIGLSTDTFLLNRLIEFYFKCKNMGYAHNLFHQMPHKNIYSWNAILTEYCKAGN 87
Query: 483 GDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
A +LF+ M N+V+ +++A L ++ L +Y M E G++PT
Sbjct: 88 LQNAHRLFSEMP----ERNIVSWNNLISALVRGRLEQQALDVYNEMIWE-GLMPT 137
>gi|30694836|ref|NP_191418.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525906|sp|Q0WN01.2|PP286_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g58590
gi|332646281|gb|AEE79802.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 179/615 (29%), Positives = 297/615 (48%), Gaps = 82/615 (13%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHIL-LSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
ST +GL+S C+SL ++ G ++H L D + +L +YG+ LE A F+
Sbjct: 116 STVSGLLS-CASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFE 173
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
MP +++ +W M++ + + + ++++ G + +F ++K S + + +
Sbjct: 174 DMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDI 233
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
+QLH K + N+LI+ Y K A +F D+ SW ++I A +K
Sbjct: 234 SKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAK 293
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSV------------------------------ 244
L+AL F M HG + PN+ + SV
Sbjct: 294 SENPLKALKLFVSMPEHG-FSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIV 352
Query: 245 --------FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
++ C N +R+ F+ I ++ WNAL++G A + + +SLF +M
Sbjct: 353 LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMG 411
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
P T + L +C + + Q+HS I++MG++ N V ++++ YAK ++ +AL
Sbjct: 412 FRPTEYTFSTALKSC----CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDAL 467
Query: 355 L-------------------VFKELGK------------NADSVSWNSIIAACLQHNQAE 383
L ++ G+ D+VSWN IAAC + + E
Sbjct: 468 LLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHE 527
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA-FDVFVMNGL 442
E+ LF ML S I+PD TF ++ C+K+ L + + +H ITKT + D FV N L
Sbjct: 528 EVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVL 587
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y KCGS+ S K+F ++++W++LI G G EAL+ F SLG P+
Sbjct: 588 IDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDR 647
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
V+ + +LTAC H G+V+EG+ L++ M+ +YG+ P +H C VDLLAR G + EAE I
Sbjct: 648 VSFISILTACRHGGMVKEGMGLFQKMK-DYGVEPEMDHYRCAVDLLARNGYLKEAEHLIR 706
Query: 563 QMACDADIVVWKSLL 577
+M AD VW++ L
Sbjct: 707 EMPFPADAPVWRTFL 721
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 136/586 (23%), Positives = 247/586 (42%), Gaps = 86/586 (14%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
QP V + N+I+++Y K G + A FD+MP+RN VS+ +I G S+ + A ++ +
Sbjct: 47 QP-VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSE 105
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG---SHLIAQNALIAMYTK 183
M G +P Q T ++ +C+ L V G QLH +K +G + L+ +Y +
Sbjct: 106 MRYFGYLPNQSTVSGLL-SCASL-DVRAGTQLHGLSLK--YGLFMADAFVGTCLLCLYGR 161
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG- 242
D + A VF + K + +W M++ G+ E + F E++ GA G
Sbjct: 162 LDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGV 221
Query: 243 ------------------------------------SVFSACSN--FARILFNEIDSPDL 264
S + C N A +F + S D+
Sbjct: 222 LKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDI 281
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
SWNA+I A N +A+ LF M + P+ T S+L L G Q+H
Sbjct: 282 VSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGM 341
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
+IK G ++ + + NA++ YAKC L ++ L F + ++ + V WN++++ +
Sbjct: 342 LIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYI-RDKNIVCWNALLSG-YANKDGPI 399
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM- 443
LF +ML +P TF+ + +C + + QLH I + G + +V++ LM
Sbjct: 400 CLSLFLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMR 455
Query: 444 -------------------------------DIYIKCGSLGSARKLFNFMENPDVVSWSS 472
IY + G + KL + +E PD VSW+
Sbjct: 456 SYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNI 515
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
I ++ +E ++LF M + P+ T V +L+ CS + + G ++ ++
Sbjct: 516 AIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTD 575
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
C+ ++D+ + G + + + +++ W +L++
Sbjct: 576 FSCADTFVCNVLIDMYGKCGSIRSVMKVFEETR-EKNLITWTALIS 620
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 175/416 (42%), Gaps = 85/416 (20%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY ++ S ++ L GR++H ++ + C+ +VL N +++ Y KCG+LED+R+ FD +
Sbjct: 318 TYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYI 377
Query: 97 PQRNVVSWTAMIAGCSQNYQENDA---IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
+N+V W A+++G Y D + L++QMLQ G P ++TF + +K+C V
Sbjct: 378 RDKNIVCWNALLSG----YANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC----VT 429
Query: 154 LGRQLHAHVIK--------------------------------SEHGSHLIAQNALIAMY 181
+QLH+ +++ + + ++ N + +Y
Sbjct: 430 ELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIY 489
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
++ + ++ + S + + D SW IAA S+ Y E + F ML +P+++ F
Sbjct: 490 SRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNI-RPDKYTF 548
Query: 242 GSVFSACSNFARI-----------------------------------------LFNEID 260
S+ S CS + +F E
Sbjct: 549 VSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETR 608
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+L +W ALI+ + H EA+ F E PD ++ S+L AC + +GM
Sbjct: 609 EKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMG 668
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+ + G + + + + A+ L A + +E+ AD+ W + + C
Sbjct: 669 LFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 1/150 (0%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQ-P 68
C ++ Y+E ++ +NIR T+ ++S CS L L LG +H I +
Sbjct: 520 CSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCA 579
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D + N +++MYGKCGS+ F++ ++N+++WTA+I+ + +A++ + + L
Sbjct: 580 DTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETL 639
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
G P + +F SI+ AC G V G L
Sbjct: 640 SLGFKPDRVSFISILTACRHGGMVKEGMGL 669
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 407 VMGACAKMASLEMVTQLHCY-ITKTGLAFD-VFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
++ C K S LH IT + V+V N ++ +Y K G + A K+F+ M
Sbjct: 18 LLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPE 77
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS---HVGLVEEG 521
+ VS++++I GY+++G D+A +F+ MR G PN T+ G+L+ S G G
Sbjct: 78 RNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQLHG 137
Query: 522 LHLYRIMENEYGIIPTREHC-SCVVDLLARAGCVHEAEDFINQM 564
L L +YG+ +C++ L R + AE M
Sbjct: 138 LSL------KYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDM 175
>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
Length = 794
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 178/612 (29%), Positives = 284/612 (46%), Gaps = 80/612 (13%)
Query: 44 ACSSLRSLQLGRKVHD----HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR 99
+ ++LRSL R +H H LL P V N +L Y +CG L A FD MP R
Sbjct: 66 SAAALRSLTAVRSIHGAALRHDLLDGPTPAV--SNALLTAYARCGDLTAALALFDAMPSR 123
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS-VCLGRQL 158
+ V++ ++IA + A+ ML G FT S++ ACS L + LGR+
Sbjct: 124 DAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHLAEDLRLGREA 183
Query: 159 HAHVIKSE--HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV-----TSWGSMIAA 211
HA +K+ G A NAL++MY + + DA+ +F + DV +W +M++
Sbjct: 184 HAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGVVTWNTMVSL 243
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
+ G EA+ +M+ G +P+ F S ACS
Sbjct: 244 LVQSGRCGEAIEVLYDMVARG-VRPDGVTFASALPACSQLEMLSLGREMHAYVLKDADLA 302
Query: 252 ---------------------ARILFNEIDSPD--LASWNALIAGVASHSNANEAMSLFS 288
AR++F+ + + + L WNA+I G A +A+ LF+
Sbjct: 303 ANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQAGLDEDALELFA 362
Query: 289 EMR-DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
M + ++P T+ +L +C T VH Y++K G N V NA++ +YA+
Sbjct: 363 RMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQNALMDLYARL 422
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML-------------- 393
+ A +F + + D VSWN++I C+ + F+L M
Sbjct: 423 GDMDAARWIFATI-EPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDAATEDGI 481
Query: 394 ----ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
+ P++IT ++ CA +A+ ++H Y + L DV V + L+D+Y KC
Sbjct: 482 AGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGSALVDMYAKC 541
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM-RSLGVSPNLVTLVGV 508
G L +R +F+ + +V++W+ LI+ Y G GDEA+ LF RM S PN VT +
Sbjct: 542 GCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASDEAKPNEVTFIAA 601
Query: 509 LTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM-ACD 567
L ACSH G+V+ GL ++R M+ +G+ PT + +C VD+L RAG + EA I+ M +
Sbjct: 602 LAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGRAGRLDEAYRIISSMEPGE 661
Query: 568 ADIVVWKSLLAS 579
+ W S L +
Sbjct: 662 QQVSAWSSFLGA 673
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 143/548 (26%), Positives = 250/548 (45%), Gaps = 81/548 (14%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLIS---ACSSL-RSLQLGRKVH 58
N +++LC L+ L A D + + + P T L+S ACS L L+LGR+ H
Sbjct: 129 NSLIAALC---LFRRWLPALD-ALRDMLLEGHPLTSFTLVSVLLACSHLAEDLRLGREAH 184
Query: 59 DHILLSKC--QPDVVLQNHILNMYGKCGSLEDAR-----MGFDKMPQRNVVSWTAMIAGC 111
L + + N +L+MY + G ++DA+ +G +P VV+W M++
Sbjct: 185 AFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGVVTWNTMVSLL 244
Query: 112 SQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK-SEHGSH 170
Q+ + +AI++ M+ GV P TF S + ACS L + LGR++HA+V+K ++ ++
Sbjct: 245 VQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMHAYVLKDADLAAN 304
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGI--ARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
+AL+ MY +R+ AR VF + + + W +MI +++ G + +AL F M
Sbjct: 305 SFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQAGLDEDALELFARM 364
Query: 229 LHHGAYQPNEFIFGSVFSACS--------------------------------------- 249
P+E V +C+
Sbjct: 365 ETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQNALMDLYARLGD 424
Query: 250 -NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR----------------- 291
+ AR +F I+ D+ SWN LI G + +A L EM+
Sbjct: 425 MDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDAATEDGIAGA 484
Query: 292 -DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ ++P+ +T+ +LL C +G ++H Y ++ DS+V V +A++ MYAKC L
Sbjct: 485 DEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGSALVDMYAKCGCL 544
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS-QIKPDHITFNDVMG 409
+ VF L + + ++WN +I A H +E LF RM+AS + KP+ +TF +
Sbjct: 545 ALSRAVFDRLPRR-NVITWNVLIMAYGMHGLGDEAIALFDRMVASDEAKPNEVTFIAALA 603
Query: 410 ACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD-- 466
AC+ ++ ++ + + G+ + +DI + G L A ++ + ME +
Sbjct: 604 ACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGRAGRLDEAYRIISSMEPGEQQ 663
Query: 467 VVSWSSLI 474
V +WSS +
Sbjct: 664 VSAWSSFL 671
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T L+ C+ L + G+++H + + DV + + +++MY KCG L +R FD++
Sbjct: 495 TLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRL 554
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGSVCLG 155
P+RNV++W +I + ++AI L+ +M+ S P + TF + + ACS G V G
Sbjct: 555 PRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRG 614
Query: 156 RQLHAHVIKSEHGSHLIA--QNALIAMYTKFDRILDARNVFSGI--ARKDVTSWGSMIAA 211
++ +K HG + + + R+ +A + S + + V++W S + A
Sbjct: 615 LEMF-RSMKRNHGVEPTPDLHACAVDILGRAGRLDEAYRIISSMEPGEQQVSAWSSFLGA 673
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 14/190 (7%)
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGL--AFDVFVMNGLMDIYIKCGSLGSARK 457
D + A + SL V +H + L V N L+ Y +CG L +A
Sbjct: 56 DRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALA 115
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
LF+ M + D V+++SLI F AL M G TLV VL ACSH+
Sbjct: 116 LFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHLA- 174
Query: 518 VEEGLHLYR-----IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD----A 568
E L L R ++N + R + ++ + AR G V +A+ +
Sbjct: 175 --EDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGG 232
Query: 569 DIVVWKSLLA 578
+V W ++++
Sbjct: 233 GVVTWNTMVS 242
>gi|147817099|emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
Length = 2076
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 165/558 (29%), Positives = 279/558 (50%), Gaps = 19/558 (3%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T A ++ CS+ L + VH + + DV + ++N+Y KCG + DAR+ FD M
Sbjct: 192 TLAPVLKLCSNSXCLWAAKGVHGYAIKIGLVWDVFVFGTLMNIYSKCGRMXDARLLFDGM 251
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG---SVC 153
+R+VV W M+ G Q E +A +L+ + +SG+ P +F+ I+ +
Sbjct: 252 RERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLXPDEFSVQLILNGVFEVNXDEGKW 311
Query: 154 LGRQLHAHVIK---SEHGSHLIAQNALIAMYTKFDRILDARNVFSGI----ARKDVTSWG 206
Q+ A+ K S+ + N ++ Y A F + D +
Sbjct: 312 HADQVQAYXXKLSLSDDNXDVFCWNKKLSEYLWAGDNWGAIECFVNMNGLNVXYDXVTLL 371
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR-----ILFNEIDS 261
++AA + G + H + + + + F+ ++ S + +LF D
Sbjct: 372 EVLAAVAD-GLNISRQIHVHAL--KTSNIADSFVATALIDVYSRSGKMEEAELLFQNKDD 428
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
DLA WNA++ G ++ N+A+ LFS + D +T+ + AC + L ZG Q+
Sbjct: 429 LDLACWNAMMFGYIISNDGNKALGLFSLINRSGEKSDQITLATAAKACGCLVLLDZGKQI 488
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H+++IK GF S++ V + IL MY KC + NA +VF + D V+W S+I+ C+ +
Sbjct: 489 HAHVIKAGFXSDLYVNSGILDMYIKCGDMVNAGIVFNYISA-PDDVAWTSMISGCVDNGN 547
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
++ R++ +M S + PD TF ++ A + + +LE QLH + K D FV
Sbjct: 548 EDQALRIYHQMRQSGVMPDEYTFATLIKASSYVTALEQGRQLHANVIKLDCVSDPFVGTS 607
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+D+Y KCG++ +LF M ++V W+++++G AQ G +EA+ LF M+S G+ P+
Sbjct: 608 LVDMYAKCGNIEDXYRLFKKMNVRNIVLWNAMLVGIAQHGNAEEAVNLFKSMKSHGIEPD 667
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
V+ +G+L+ACS GL E + M N+ GI P EH SC+VD L AG V E + I
Sbjct: 668 RVSFIGILSACSLAGLTSEAYEYFHSMPNDCGIEPEIEHYSCLVDALGXAGLVQEXDKVI 727
Query: 562 NQMACDADIVVWKSLLAS 579
M A + ++LL +
Sbjct: 728 ETMPFKASASMNRALLGA 745
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 148/557 (26%), Positives = 270/557 (48%), Gaps = 26/557 (4%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+ S +L LG+ H I++S D L N++L +Y KCGSL A FD P+R+
Sbjct: 90 LLRTAISTHNLLLGKCTHARIVVSGTAGDHFLTNNLLTLYSKCGSLSFACQVFDTTPERD 149
Query: 101 VVSWTAMIAGCSQNYQEND-----AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+V+W A++ + + ND + L+ + +S + T ++K CS +
Sbjct: 150 LVTWNAILGAYASSVDSNDGNAQEGLHLFRLLRESLGSTTRMTLAPVLKLCSNSXCLWAA 209
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ +H + IK + L+ +Y+K R+ DAR +F G+ +DV W M+ + +L
Sbjct: 210 KGVHGYAIKIGLVWDVFVFGTLMNIYSKCGRMXDARLLFDGMRERDVVLWNMMLKGYVQL 269
Query: 216 GYELEALCHFNEMLHHGAYQPNEF----IFGSVFSACSNFARILFNEI-----------D 260
G E EA F+E H P+EF I VF + + +++ D
Sbjct: 270 GLEKEAFQLFSE-FHRSGLXPDEFSVQLILNGVFEVNXDEGKWHADQVQAYXXKLSLSDD 328
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ D+ WN ++ + A+ F M + D +T+ +L A L + + Q
Sbjct: 329 NXDVFCWNKKLSEYLWAGDNWGAIECFVNMNGLNVXYDXVTLLEVLAAVADGLNISR--Q 386
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H + +K ++ V A++ +Y++ + A L+F+ + D WN+++ + N
Sbjct: 387 IHVHALKTSNIADSFVATALIDVYSRSGKMEEAELLFQN-KDDLDLACWNAMMFGYIISN 445
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
+ LFS + S K D IT AC + L+ Q+H ++ K G D++V +
Sbjct: 446 DGNKALGLFSLINRSGEKSDQITLATAAKACGCLVLLDZGKQIHAHVIKAGFXSDLYVNS 505
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
G++D+YIKCG + +A +FN++ PD V+W+S+I G G D+AL+++ +MR GV P
Sbjct: 506 GILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHQMRQSGVMP 565
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ T ++ A S+V +E+G L+ + + + + +VD+ A+ G + +
Sbjct: 566 DEYTFATLIKASSYVTALEQGRQLHANV-IKLDCVSDPFVGTSLVDMYAKCGNIEDXYRL 624
Query: 561 INQMACDADIVVWKSLL 577
+M +IV+W ++L
Sbjct: 625 FKKMNV-RNIVLWNAML 640
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 188/443 (42%), Gaps = 52/443 (11%)
Query: 1 FSNDYVSSLCKQNLYNEALVAYD--------FSQNNTNIRIRPSTYAGLISACSSLRSLQ 52
S+D C +E L A D + N N+ T +++A + L
Sbjct: 325 LSDDNXDVFCWNKKLSEYLWAGDNWGAIECFVNMNGLNVXYDXVTLLEVLAAVAD--GLN 382
Query: 53 LGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCS 112
+ R++H H L + D + ++++Y + G +E+A + F ++ W AM+ G
Sbjct: 383 ISRQIHVHALKTSNIADSFVATALIDVYSRSGKMEEAELLFQNKDDLDLACWNAMMFGYI 442
Query: 113 QNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
+ N A+ L+ + +SG Q T + KAC L + G+Q+HAHVIK+ S L
Sbjct: 443 ISNDGNKALGLFSLINRSGEKSDQITLATAAKACGCLVLLDZGKQIHAHVIKAGFXSDLY 502
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
+ ++ MY K +++A VF+ I+ D +W SMI+ G E +AL +++M G
Sbjct: 503 VNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHQMRQSG 562
Query: 233 AYQPNEFIFGSVFSACSNFARI-------------------------------------- 254
P+E+ F ++ A S +
Sbjct: 563 V-MPDEYTFATLIKASSYVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDX 621
Query: 255 --LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC-IG 311
LF +++ ++ WNA++ G+A H NA EA++LF M+ + PD ++ +L AC +
Sbjct: 622 YRLFKKMNVRNIVLWNAMLVGIAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSLA 681
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
LT HS G + + + ++ ++ V + + A + +
Sbjct: 682 GLTSEAYEYFHSMPNDCGIEPEIEHYSCLVDALGXAGLVQEXDKVIETMPFKASASMNRA 741
Query: 372 IIAACLQHNQAEELFRLFSRMLA 394
++ AC E R+ +R+ A
Sbjct: 742 LLGACRIQGDVEIGKRVAARLFA 764
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 107/228 (46%), Gaps = 12/228 (5%)
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
SLL I L G H+ I+ G + + N +LT+Y+KC L A VF +
Sbjct: 89 SLLRTAISTHNLLLGKCTHARIVVSGTAGDHFLTNNLLTLYSKCGSLSFACQVF-DTTPE 147
Query: 364 ADSVSWNSIIAACL-----QHNQAEE---LFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
D V+WN+I+ A A+E LFRL L S + +T V+ C+
Sbjct: 148 RDLVTWNAILGAYASSVDSNDGNAQEGLHLFRLLRESLGSTTR---MTLAPVLKLCSNSX 204
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
L +H Y K GL +DVFV LM+IY KCG + AR LF+ M DVV W+ ++
Sbjct: 205 CLWAAKGVHGYAIKIGLVWDVFVFGTLMNIYSKCGRMXDARLLFDGMRERDVVLWNMMLK 264
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
GY Q G EA +LF+ G+ P+ ++ +L V E H
Sbjct: 265 GYVQLGLEKEAFQLFSEFHRSGLXPDEFSVQLILNGVFEVNXDEGKWH 312
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 192/492 (39%), Gaps = 94/492 (19%)
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKS-EHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR 199
S+++ ++ LG+ HA ++ S G H + N L+ +Y+K + A VF
Sbjct: 89 SLLRTAISTHNLLLGKCTHARIVVSGTAGDHFLTNN-LLTLYSKCGSLSFACQVFDTTPE 147
Query: 200 KDVTSWGSMIAAF-----SKLGYELEALCHFNEMLH------------------------ 230
+D+ +W +++ A+ S G E L H +L
Sbjct: 148 RDLVTWNAILGAYASSVDSNDGNAQEGL-HLFRLLRESLGSTTRMTLAPVLKLCSNSXCL 206
Query: 231 ------HG-----AYQPNEFIFGS---VFSACSNF--ARILFNEIDSPDLASWNALIAGV 274
HG + F+FG+ ++S C AR+LF+ + D+ WN ++ G
Sbjct: 207 WAAKGVHGYAIKIGLVWDVFVFGTLMNIYSKCGRMXDARLLFDGMRERDVVLWNMMLKGY 266
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI------GRLTLYQGMQVHSYIIKM 328
EA LFSE L PD +V +L G+ + QV +Y K+
Sbjct: 267 VQLGLEKEAFQLFSEFHRSGLXPDEFSVQLILNGVFEVNXDEGK---WHADQVQAYXXKL 323
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
+ N D WN ++ L
Sbjct: 324 SLSDD-----------------------------NXDVFCWNKKLSEYLWAGDNWGAIEC 354
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
F M + D +T +V+ A A L + Q+H + KT D FV L+D+Y +
Sbjct: 355 FVNMNGLNVXYDXVTLLEVLAAVAD--GLNISRQIHVHALKTSNIADSFVATALIDVYSR 412
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
G + A LF ++ D+ W++++ GY G++AL LF+ + G + +TL
Sbjct: 413 SGKMEEAELLFQNKDDLDLACWNAMMFGYIISNDGNKALGLFSLINRSGEKSDQITLATA 472
Query: 509 LTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
AC + L++ZG +H + I + G S ++D+ + G + A N ++
Sbjct: 473 AKACGCLVLLDZGKQIHAHVI---KAGFXSDLYVNSGILDMYIKCGDMVNAGIVFNYISA 529
Query: 567 DADIVVWKSLLA 578
D V W S+++
Sbjct: 530 PDD-VAWTSMIS 540
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 164/542 (30%), Positives = 269/542 (49%), Gaps = 69/542 (12%)
Query: 41 LISACSSLRSLQLGRKVHDHILL---SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
L+ C++ L++G +H H+++ S D N ++N+Y KC AR FD MP
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGSVCLGR 156
+RNVVSW AM+ G + + + +KL+ M SG P +F + K+CS G + G+
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q H +K SH +N L+ MY+ +A V + D++ + S ++ + + G
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVAS 276
E L ++L A + +F+ WN L
Sbjct: 217 AFKEGL----DVLRKTANE--DFV--------------------------WNNL------ 238
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
++ LFS +RD L +QVHS +++ GF++ V
Sbjct: 239 --TYLSSLRLFSNLRDLNL----------------------ALQVHSRMVRFGFNAEVEA 274
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWN-SIIAACLQHNQAEELFRLFSRMLAS 395
C A++ MY KC + A VF + +A ++ N +I+ A Q EE LFS+M
Sbjct: 275 CGALINMYGKCGKVLYAQRVFDD--THAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTK 332
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA 455
++ P+ TF ++ + A+++ L+ LH + K+G V V N L+++Y K GS+ A
Sbjct: 333 EVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDA 392
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
RK F+ M D+V+W+++I G + G G EAL+ F RM G PN +T +GVL ACSH+
Sbjct: 393 RKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHI 452
Query: 516 GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
G VE+GLH + + ++ + P +H +C+V LL++AG +AEDF+ + D+V W++
Sbjct: 453 GFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRT 512
Query: 576 LL 577
LL
Sbjct: 513 LL 514
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 194/436 (44%), Gaps = 41/436 (9%)
Query: 23 DFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGK 82
DF NN TY + S+LR L L +VH ++ +V ++NMYGK
Sbjct: 232 DFVWNNL-------TYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGK 284
Query: 83 CGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI 142
CG + A+ FD +N+ T ++ Q+ +A+ L+ +M V P ++TF +
Sbjct: 285 CGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAIL 344
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
+ + + L + G LH V+KS + +H++ NAL+ MY K I DAR FSG+ +D+
Sbjct: 345 LNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDI 404
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFN 257
+W +MI+ S G EAL F+ M+ G PN F V ACS+ + FN
Sbjct: 405 VTWNTMISGCSHHGLGREALEAFDRMIFTGEI-PNRITFIGVLQACSHIGFVEQGLHYFN 463
Query: 258 EIDS-----PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
++ PD+ + ++ ++ +A MR + D + +LL AC R
Sbjct: 464 QLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDF---MRTAPIEWDVVAWRTLLNACYVR 520
Query: 313 LTLYQGMQVHSYII-KMGFDSNVPVCNAILTM-------YAKCSVLCNALLVFKELGKNA 364
G +V Y I K DS V V + + AK L N V KE G
Sbjct: 521 RNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPG--- 577
Query: 365 DSVSW----NSIIAACLQHNQAEELFRLFSRM--LASQIKPDHITFNDVMGACAKMASLE 418
VSW N + NQ E+ +++++ + S+IKP + DV GA + +
Sbjct: 578 --VSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYS-PDVAGAFHDVDEEQ 634
Query: 419 MVTQLHCYITKTGLAF 434
L + K +A+
Sbjct: 635 REDNLSYHSEKLAVAY 650
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 167/353 (47%), Gaps = 16/353 (4%)
Query: 233 AYQPNEFIFGSVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
AYQ N I +++ C AR LF+ + ++ SW A++ G + E + LF M
Sbjct: 69 AYQINSLI--NLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSM 126
Query: 291 R-DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
E P+ + +C + +G Q H +K G S+ V N ++ MY+ CS
Sbjct: 127 FFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSG 186
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
A+ V +L D ++S ++ L+ +E + + +++T+ +
Sbjct: 187 NGEAIRVLDDL-PYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLR 245
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
+ + L + Q+H + + G +V L+++Y KCG + A+++F+ ++
Sbjct: 246 LFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFL 305
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR-IM 528
++++ Y Q +EAL LF++M + V PN T +L + + + L+++G L+ ++
Sbjct: 306 NTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVL 365
Query: 529 ENEYGIIPTREHC---SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++ Y R H + +V++ A++G + +A + M DIV W ++++
Sbjct: 366 KSGY-----RNHVMVGNALVNMYAKSGSIEDARKAFSGMTF-RDIVTWNTMIS 412
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 387 RLFSRMLASQIKPDHI-TFNDVMGACAKMASLEMVTQLHCYI---TKTGLAFDVFVMNGL 442
+L S + S+ P I N+++ CA + L + +H ++ ++ A D + +N L
Sbjct: 16 KLASLVPKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSL 75
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS-PN 501
+++Y+KC ARKLF+ M +VVSW +++ GY G E LKLF M G S PN
Sbjct: 76 INLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPN 135
Query: 502 LVTLVGVLTACSHVGLVEEGLHLY 525
V +CS+ G +EEG +
Sbjct: 136 EFVATVVFKSCSNSGRIEEGKQFH 159
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 115/281 (40%), Gaps = 16/281 (5%)
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP---VCNAILTMYAKCSVLCNALLVFK 358
++ LL C L G +H+++I S N+++ +Y KC A +F
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLF- 92
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS-QIKPDHITFNDVMGACAKMASL 417
+L + VSW +++ E+ +LF M S + +P+ V +C+ +
Sbjct: 93 DLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRI 152
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
E Q H K GL FV N L+ +Y C G A ++ + + D+ +SS + GY
Sbjct: 153 EEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
+ G E L + + + N +T + L S++ + L ++ M +G
Sbjct: 213 LECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMV-RFGFNAE 271
Query: 538 REHCSCVVDLLARAGCV----------HEAEDFINQMACDA 568
E C ++++ + G V H F+N DA
Sbjct: 272 VEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDA 312
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 160/557 (28%), Positives = 266/557 (47%), Gaps = 50/557 (8%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
DV++ ++N YGKCG L+ A FD + R+ W AMI+ + Q ++A++L+ QM
Sbjct: 173 DVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMR 232
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
GV P + T + + AC ++HA + + + Q AL+ MY KF ++
Sbjct: 233 LGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGKVD 292
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
DA +F I +DV SW +M+ A + G+ +A F EML G P+ + ++ +AC
Sbjct: 293 DAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGEL-PSRITYVAILNAC 351
Query: 249 --------SNFAR---------------------------------------ILFNEIDS 261
+F + +L + D
Sbjct: 352 FLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQ 411
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
P + WN +++ + EA ++F M + D +++ ++ AC +L +G +
Sbjct: 412 PSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWI 471
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
HS + + PV NA++TMYA+ L +A +F + + +SW +++ Q
Sbjct: 472 HSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAM-TTRNVISWTAMVGVHSQLGL 530
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
E R+F +L + P+ +TF V+ AC +AS+ + +++TG +V V NG
Sbjct: 531 NREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANG 590
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+ KCGSL F M + VSW++ I AQ G G ++LF M+ G+
Sbjct: 591 LLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTG 650
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
VTL+GVL++CSH GLV +G + M +YG EH SCV+DLL+RAG + AE+F+
Sbjct: 651 SVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFV 710
Query: 562 NQMA-CDADIVVWKSLL 577
++ D + W +LL
Sbjct: 711 KRLPFGDQSVFPWITLL 727
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 167/596 (28%), Positives = 274/596 (45%), Gaps = 63/596 (10%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
ST+A LI C+ L L GR++H IL + + L +L MY KCGS E+AR F
Sbjct: 41 STFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQG 100
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ ++VV+WT++I +++ +A L+ +M GVMP T+ +++ AC G
Sbjct: 101 IQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGAC--------G 152
Query: 156 RQLHAHVIKSEH---GS---HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
I++ GS +I A++ Y K + A VF GI +D W +MI
Sbjct: 153 HPWEVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMI 212
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------FARIL-- 255
+ EAL F +M G PN+ + +AC + FAR L
Sbjct: 213 SLLVAHEQGDEALELFRQM-RLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAG 271
Query: 256 --------------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
F I D+ SWNA++ A + ++A F E
Sbjct: 272 DADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFRE 331
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK--MGFDS-NVPVCNAILTMYAK 346
M LP +T ++L AC L G V + ++ G +S +V + AI+ MY++
Sbjct: 332 MLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSR 391
Query: 347 CSVLCNALLVFKELGKNADSVS---WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
C +A L ++ D S WN++++ +++ Q EE F +F ML + D ++
Sbjct: 392 CKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVS 451
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
V AC ASLE +H +T++ L V N L+ +Y + GSL AR++F+ M
Sbjct: 452 LMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMT 511
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
+V+SW++++ ++Q G EAL++F + GV+PN VT VL AC ++ +
Sbjct: 512 TRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAA-K 570
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
L + +E G E + ++ L + G + E +F MA + V W + +A+
Sbjct: 571 LVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVK-NQVSWNTAIAA 625
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 7/283 (2%)
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
D T +L+ C L QG ++H I++ G + + +L MY KC A VF
Sbjct: 39 DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVF 98
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+ + ++ V+W S+I + +E F LF M + P+ +T+ V+GAC +
Sbjct: 99 QGI-QDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEV 157
Query: 418 EMVTQLHCYITKTG-LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
+ + + G L DV V +M+ Y KCG L SA +F+ + D W+++I
Sbjct: 158 DTI---RARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISL 214
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
GDEAL+LF +MR GV+PN T V L AC H E L ++ G
Sbjct: 215 LVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDAD 274
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
T + +V++ + G V +AE+ ++ + D+V W ++L +
Sbjct: 275 TVVQ-TALVNMYGKFGKVDDAEEIFERIQ-ERDVVSWNAMLTA 315
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 110/210 (52%), Gaps = 1/210 (0%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
+ +AC S SL+ G+ +H + S+ +QN ++ MY + GSLEDAR FD M RN
Sbjct: 455 VFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRN 514
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
V+SWTAM+ SQ +A++++ +L GV P + TF +++ AC L S+ + + A
Sbjct: 515 VISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQA 574
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+ ++ ++ N L+ K + + N F +A K+ SW + IAA ++ G +
Sbjct: 575 CLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVR 634
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
+ F M G + + G V S+CS+
Sbjct: 635 GVELFQTMQLEGIDTGSVTLIG-VLSSCSH 663
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 142/373 (38%), Gaps = 80/373 (21%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
QP +++ N +L++Y +N Q +A ++
Sbjct: 411 QPSIMMWNTVLSLY-------------------------------VENEQFEEAFTIFRL 439
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
ML GV + ++ AC S+ G+ +H+ + +SE QNAL+ MY +
Sbjct: 440 MLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGS 499
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+ DAR +F + ++V SW +M+ S+LG EAL F +L G PNE F +V +
Sbjct: 500 LEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGV-APNEVTFTAVLN 558
Query: 247 ACSNFARI----------------------------------------LFNEIDSPDLAS 266
AC N A I F + + S
Sbjct: 559 ACGNLASIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVS 618
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WN IA A H N + LF M+ + +T+ +L +C + QG +SY +
Sbjct: 619 WNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQG---YSYFL 675
Query: 327 KMGFDSNVPV----CNAILTMYAKCSVLCNALLVFKELGKNADSV-SWNSIIAACLQHNQ 381
M D P + ++ + ++ L +A K L SV W +++ C H
Sbjct: 676 NMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGD 735
Query: 382 AEELFRLFSRMLA 394
E R R+L
Sbjct: 736 LERGGRATQRILG 748
>gi|413938252|gb|AFW72803.1| hypothetical protein ZEAMMB73_565260 [Zea mays]
Length = 709
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 172/576 (29%), Positives = 285/576 (49%), Gaps = 31/576 (5%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKC----QPDVVLQNHILNMYGKCGSLED 88
I P++ L+ + R L +H +L S Q + N +L+ Y +CG L
Sbjct: 21 ITPTSSVALLRGAAERRDTALTSALHAALLKSGALRSRQAPLAAANSLLHAYLQCGLLSR 80
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG----------VMPGQFT 138
A D+MP+R+ ++ +I+ + DA++ ++ ML G V P +FT
Sbjct: 81 ALRLLDEMPRRDAATYAPLISAHCRLGAPLDALRAFLDMLAWGCSDEEGVDDVVRPNEFT 140
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
++++AC L R +H +++ +L+ MY K + AR + G+
Sbjct: 141 AAAVVQACGLARDERLARMVHGYLVAGGFCDDPFVLGSLVNMYAKVGDVASARRLLLGLP 200
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-ARILFN 257
+DV SW ++++ EAL F ML G PN SV AC+ A LF
Sbjct: 201 CRDVVSWTAIVSGCVLNAMLEEALGVFLMMLEDGVL-PNNVTMLSVIQACALMGASELFG 259
Query: 258 EIDS--------PDLASWNALIAGVASHSNANEAMSLFSE--MRDRELLPDGLTVHSLLC 307
+ + D + N+LI A + EA+ LF ++ + + + ++L
Sbjct: 260 PVHALVVLLELEHDASVVNSLIMMYAKNGFVEEAIRLFKGFYLKTGSVCSNEDVLAAVLY 319
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
C ++ G +H++ IKMG ++ V N+++ MYA+ + ALLVF+ + + D V
Sbjct: 320 GCTISGSVKNGEGLHAHTIKMGAFPSISVENSLMGMYARFEQIDAALLVFEGM-EVKDIV 378
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQ---IKPDHITFNDVMGACAKMASLEMVTQLH 424
SWN+II+ + ++ E +FS + A+ + PD +T ++ AC+ L LH
Sbjct: 379 SWNTIISCLAKTDRVNEAMDIFSVLHAAAGGGLAPDFVTVLSMLQACSNAGLLHQGQMLH 438
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
Y+ K+G +DV + N L+ +Y K G + A +F M+ D+VSW+S+I Y G G
Sbjct: 439 GYVMKSGFVYDVSICNALISMYAKLGRIDFAEMIFERMDIKDLVSWNSMINAYGMHGDGH 498
Query: 485 EALKLFTRMRSLGV-SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
AL++F +++ G +PN +T V V++ACSH GLV EG + M ++GI P+ +H +C
Sbjct: 499 SALRVFHQLKDAGTPAPNAITFVSVISACSHSGLVSEGHKCFESMGRDHGIEPSMDHYAC 558
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
VVDLL R+G EAE FI M D +W LLA+
Sbjct: 559 VVDLLGRSGRFAEAEQFIRDMPVRPDSTIWGPLLAA 594
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 149/493 (30%), Positives = 247/493 (50%), Gaps = 41/493 (8%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP+ T A ++ AC R +L R VH +++ D + ++NMY K G + AR
Sbjct: 134 VRPNEFTAAAVVQACGLARDERLARMVHGYLVAGGFCDDPFVLGSLVNMYAKVGDVASAR 193
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+P R+VVSWTA+++GC N +A+ +++ ML+ GV+P T S+I+AC+ +G
Sbjct: 194 RLLLGLPCRDVVSWTAIVSGCVLNAMLEEALGVFLMMLEDGVLPNNVTMLSVIQACALMG 253
Query: 151 SVCLGRQLHAHVI--KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI--------ARK 200
+ L +HA V+ + EH + ++ N+LI MY K + +A +F G + +
Sbjct: 254 ASELFGPVHALVVLLELEHDASVV--NSLIMMYAKNGFVEEAIRLFKGFYLKTGSVCSNE 311
Query: 201 DVTS---WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--- 254
DV + +G I+ K G L A H +M GA+ P+ + S+ + F +I
Sbjct: 312 DVLAAVLYGCTISGSVKNGEGLHA--HTIKM---GAF-PSISVENSLMGMYARFEQIDAA 365
Query: 255 --LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE---LLPDGLTVHSLLCAC 309
+F ++ D+ SWN +I+ +A NEAM +FS + L PD +TV S+L AC
Sbjct: 366 LLVFEGMEVKDIVSWNTIISCLAKTDRVNEAMDIFSVLHAAAGGGLAPDFVTVLSMLQAC 425
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSW 369
L+QG +H Y++K GF +V +CNA+++MYAK + A ++F+ + D VSW
Sbjct: 426 SNAGLLHQGQMLHGYVMKSGFVYDVSICNALISMYAKLGRIDFAEMIFERMDIK-DLVSW 484
Query: 370 NSIIAACLQHNQAEELFRLFSRML-ASQIKPDHITFNDVMGACAKMASLEMVTQLH-CYI 427
NS+I A H R+F ++ A P+ ITF V+ AC+ +V++ H C+
Sbjct: 485 NSMINAYGMHGDGHSALRVFHQLKDAGTPAPNAITFVSVISACSHSG---LVSEGHKCFE 541
Query: 428 T---KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYAQFGCG 483
+ G+ + ++D+ + G A + M PD W L+ G
Sbjct: 542 SMGRDHGIEPSMDHYACVVDLLGRSGRFAEAEQFIRDMPVRPDSTIWGPLLAACQLHGNV 601
Query: 484 DEALKLFTRMRSL 496
D A K + +L
Sbjct: 602 DLAEKAAKELSAL 614
>gi|242037017|ref|XP_002465903.1| hypothetical protein SORBIDRAFT_01g047870 [Sorghum bicolor]
gi|241919757|gb|EER92901.1| hypothetical protein SORBIDRAFT_01g047870 [Sorghum bicolor]
Length = 656
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 160/530 (30%), Positives = 258/530 (48%), Gaps = 50/530 (9%)
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
S +P ++ +H+ G +++A F + + MI G + DA+
Sbjct: 53 SGSRPKSLILSHV-----AAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAA 107
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
Y ML +G P +FTF ++K C+ G++ GR HA VIK G+ + N+L+A+Y K
Sbjct: 108 YRAMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAK 167
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM--------------- 228
+ DA VF G+ +D+ SW +M+ + G AL F EM
Sbjct: 168 LGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIA 227
Query: 229 ---------------------LHHGAYQPNEFIFGS----VFSACSN--FARILFNEIDS 261
+ HG Q + G+ ++ C N FA +F ++
Sbjct: 228 ALAACCLESALALGREIHGYAIRHGLEQ--DVKVGTSLVDMYCKCGNVFFAENVFAKMPL 285
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
+ +WN +I G A + +A F +MR + +T +LL AC + G V
Sbjct: 286 RTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSV 345
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H+Y+++ F +V + A+L MY K + ++ +F ++ + VSWN++IAA +
Sbjct: 346 HAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQI-TDKTLVSWNNMIAAYMYMEM 404
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+E LF +L + PD+ T V+ A + S+ Q+H YI K G +MN
Sbjct: 405 YQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNA 464
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
+M +Y +CG++ ++R++F+ M DV+SW+++I+GYA G G AL++F M+ G+ PN
Sbjct: 465 VMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPN 524
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
T V VLTACS GL EG + M+ EYG+IP EH C+ DLL RA
Sbjct: 525 ESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRA 574
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 202/452 (44%), Gaps = 46/452 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + +L +AL AY + + R T+ ++ C+ +L GR H ++
Sbjct: 89 NVMIRGFADADLPLDALAAYR-AMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVI 147
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
DV N ++ +Y K G + DA FD MP R++VSW M+ G N A+
Sbjct: 148 KLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALA 207
Query: 123 LYIQMLQSGVMPGQFTFGSI--IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ +M + G + G I + AC ++ LGR++H + I+ + +L+ M
Sbjct: 208 CFREM-NDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDM 266
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K + A NVF+ + + V +W MI ++ ++A F +M G +Q
Sbjct: 267 YCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDG-FQVEVVT 325
Query: 241 FGSVFSACSN-----FAR-----------------------------------ILFNEID 260
++ +AC+ F R +F +I
Sbjct: 326 AINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQIT 385
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
L SWN +IA EA++LF E+ ++ L PD T+ +++ A + ++ Q Q
Sbjct: 386 DKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQ 445
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+HSYI+K+G+ + + NA++ MYA+C + + +F ++ D +SWN+II H
Sbjct: 446 MHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKM-PGKDVISWNTIIIGYAIHG 504
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
Q + +F M S ++P+ TF V+ AC+
Sbjct: 505 QGKIALEMFDEMKCSGMEPNESTFVSVLTACS 536
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 160/348 (45%), Gaps = 8/348 (2%)
Query: 235 QPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+P I V + + A F + P N +I G A +A++ + M D
Sbjct: 56 RPKSLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAG 115
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
PD T +L C L +G H+ +IK+G ++V N+++ +YAK ++ +A
Sbjct: 116 ARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAE 175
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM-LASQIKPDHITFNDVMGACAK 413
VF + D VSWN+++ + + F M A Q+ D + + AC
Sbjct: 176 RVFDGMPAR-DIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCL 234
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
++L + ++H Y + GL DV V L+D+Y KCG++ A +F M VV+W+ +
Sbjct: 235 ESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCM 294
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV--GLVEEGLHLYRIMENE 531
I GYA +A F +MR G +VT + +LTAC+ L +H Y + +
Sbjct: 295 IGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRH- 353
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+P + ++++ + G V +E Q+ D +V W +++A+
Sbjct: 354 --FLPHVVLETALLEMYGKVGKVESSEKIFGQIT-DKTLVSWNNMIAA 398
>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 638
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 160/527 (30%), Positives = 250/527 (47%), Gaps = 44/527 (8%)
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M +R + W ++ S++ + + QM + P FT +KAC L V G
Sbjct: 1 MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60
Query: 156 RQLHAHVIKS-EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
+H + K+ GS L ++LI MY K R+ +A +F+ + + D+ +W SM++ F K
Sbjct: 61 EMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEK 120
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------- 251
G +A+ F M P+ ++ SAC+
Sbjct: 121 NGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLS 180
Query: 252 -----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
A LF + D+ SW+ +IA + A EA+ +F+EM D
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDG 240
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
P+ TV +L AC L QG + H I+ G ++ V V A++ MY KC A
Sbjct: 241 TEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 300
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM-LASQIKPDHITFNDVMGACAK 413
VF + K D VSW ++I+ + A FS M L + +PD I V+G+C++
Sbjct: 301 AVFSRIPKK-DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSE 359
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ L+ H Y+ K G + F+ L+++Y +CGSLG+A K+FN + D V W+SL
Sbjct: 360 LGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSL 419
Query: 474 ILGYAQFGCGDEALKLFTRM-RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
I GY G G +AL+ F M RS V PN VT + +L+ACSH GL+ EGL ++ +M N+Y
Sbjct: 420 ITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDY 479
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ P EH + +VDLL R G + A + +M + +LL +
Sbjct: 480 RLAPNLEHYAVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGA 526
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 225/475 (47%), Gaps = 50/475 (10%)
Query: 42 ISACSSLRSLQLGRKVHDHILLS-KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
+ AC LR ++ G +H + + D+ + + ++ MY KCG + +A F+++ + +
Sbjct: 48 LKACGELREVKYGEMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPD 107
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
+V+W++M++G +N A++ + +M S V P + T +++ AC+ L + LGR +H
Sbjct: 108 IVTWSSMVSGFEKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVH 167
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
V++ + L N+L+ Y K +A N+F +A KDV SW ++IA + + G
Sbjct: 168 GFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAA 227
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------------ 249
EAL FNEM+ G +PN V AC+
Sbjct: 228 EALRVFNEMIDDGT-EPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTAL 286
Query: 250 ----------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPD 298
A +F+ I D+ SW ALI+G + A+ ++ FS M + PD
Sbjct: 287 VDMYMKCFSPEEAYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 346
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+ + +L +C L Q HSY+IK GFDSN + +++ +Y++C L NA VF
Sbjct: 347 AILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN 406
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML-ASQIKPDHITFNDVMGACAKMASL 417
E+ D+V W S+I H + + F+ M+ +S++KP+ +TF ++ AC+ +
Sbjct: 407 EIALK-DTVVWTSLITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLI 465
Query: 418 -EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSA---RKLFNFMENPDVV 468
E + + LA ++ L+D+ + G L +A K F P ++
Sbjct: 466 HEGLRIFELMVNDYRLAPNLEHYAVLVDLLGRVGELDTAIEITKRMPFSPTPQIL 520
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 178/390 (45%), Gaps = 44/390 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T L+SAC+ L + +LGR VH ++ D+ L N +LN Y K + ++A F M
Sbjct: 146 TLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMM 205
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+++V+SW+ +IA QN +A++++ +M+ G P T +++AC+ + GR
Sbjct: 206 AEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVATVLCVLQACAAANDLEQGR 265
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF---- 212
+ H I+ + + AL+ MY K +A VFS I +KDV SW ++I+ F
Sbjct: 266 KTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPKKDVVSWVALISGFTLNG 325
Query: 213 --------------------------------SKLGYELEALCHFNEMLHHGAYQPNEFI 240
S+LG+ +A C + ++ +G + N FI
Sbjct: 326 MAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKYG-FDSNPFI 384
Query: 241 FGS---VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRE 294
S ++S C + A +FNEI D W +LI G H +A+ F+ M R E
Sbjct: 385 GASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSE 444
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNA 353
+ P+ +T S+L AC +++G+++ ++ N+ ++ + + L A
Sbjct: 445 VKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHYAVLVDLLGRVGELDTA 504
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ + K + + +++ AC H E
Sbjct: 505 IEITKRMPFSPTPQILGTLLGACRIHQNGE 534
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 169/579 (29%), Positives = 281/579 (48%), Gaps = 85/579 (14%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+TYA ++ +C S LG+++H H + S + +L MY + S E+A FD
Sbjct: 52 TTYASILDSCGSP---ILGKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHVFDT 108
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ--FTFGSIIKACSGLGSVC 153
MP RN+ SWTA++ + +A L+ Q+L GV F F ++K C GL +V
Sbjct: 109 MPLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCAVE 168
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
LGRQ+H +K + M + F+ +FS +RK S+ +MIA +
Sbjct: 169 LGRQMHGMALKHDGD-----------MKSAFE-------MFSRFSRKSAASYNAMIAGYW 210
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAG 273
+ G +A F+ M G + D SWN++I+G
Sbjct: 211 ENGNLFKAKELFDRMEQEGVQK---------------------------DRISWNSMISG 243
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
S +EA SLF ++ + PD T+ S+L C ++ +G + HS I G SN
Sbjct: 244 YVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSN 303
Query: 334 VPVCNAILTMYAKCSVLCNALLVF---------------------------KEL------ 360
V A++ MY+KC + A + F +EL
Sbjct: 304 SIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRR 363
Query: 361 -GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
G + +WN IIA +++ Q + +LF+ M + ++PD T ++ AC+++A+++
Sbjct: 364 DGFEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQR 423
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
Q+H Y + G DV + L+D+Y KCG + +++N + NP++VS ++++ YA
Sbjct: 424 GKQVHAYSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAM 483
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTRE 539
G G+E + LF RM + V P+ VT + VL++C H G +E G +M Y ++P+ +
Sbjct: 484 HGHGEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIGHECLALMV-AYNVMPSLK 542
Query: 540 HCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
H +C+VDLL+RAG ++EA + I + +AD V W +LL
Sbjct: 543 HYTCMVDLLSRAGQLYEAYELIKNLPTEADAVTWNALLG 581
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/445 (21%), Positives = 189/445 (42%), Gaps = 93/445 (20%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQ-------------NHIL 77
+R+ + ++ C L +++LGR++H L + N ++
Sbjct: 147 VRLDFFVFPVVLKICCGLCAVELGRQMHGMALKHDGDMKSAFEMFSRFSRKSAASYNAMI 206
Query: 78 NMYGKCGSLEDARMGFDKMPQRNV----VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
Y + G+L A+ FD+M Q V +SW +MI+G ++A L+ +L+ G+
Sbjct: 207 AGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIE 266
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P FT GS++ C+ + S+ G++ H+ I S+ I AL+ MY+K I+ A+
Sbjct: 267 PDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMA 326
Query: 194 FSGIARKDVTSWGSMIAAFSKL----------------GYEL------------------ 219
F G++ +D+ +W ++I+ +++ G+E
Sbjct: 327 FDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGIIAGYVENKQY 386
Query: 220 -EALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------------ 254
A+ F EM +P+ + G + +ACS A I
Sbjct: 387 DSAMQLFTEM-QIANLRPDIYTVGIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAA 445
Query: 255 ----------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
++N I +P+L S NA++ A H + E ++LF M ++ PD
Sbjct: 446 LVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIALFRRMLASKVRPD 505
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+T ++L +C+ +L G + + ++ ++ ++ + ++ L A + K
Sbjct: 506 HVTFLAVLSSCVHAGSLEIGHECLALMVAYNVMPSLKHYTCMVDLLSRAGQLYEAYELIK 565
Query: 359 ELGKNADSVSWNSIIAACLQHNQAE 383
L AD+V+WN+++ C HN+ +
Sbjct: 566 NLPTEADAVTWNALLGGCFIHNEVD 590
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 161/552 (29%), Positives = 271/552 (49%), Gaps = 45/552 (8%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+ TY ++ C+ L+S G+KVH I + D L +++ Y CG L++ R
Sbjct: 96 ELETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRR 155
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV--MPGQFTFGSIIKACSGL 149
FD M ++NV W M++ ++ ++I L+ M++ G+ + F K C
Sbjct: 156 VFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCD-R 214
Query: 150 GSVCLGRQLHAHVIK--SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
+ + +V +E G + Q + + I+ +V G A S G
Sbjct: 215 DVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATII---SVLVGCANSGTLSLGK 271
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--ARILFNEIDSPDLA 265
+ + + + E +F+ L ++S C + A +F ++ ++
Sbjct: 272 AVHSLA-IKSSFERRINFSNTLL------------DMYSKCGDLDGALRVFEKMGERNVV 318
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SW ++IAG ++ A+ L +M + D + + S+L AC +L G VH YI
Sbjct: 319 SWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 378
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
+SN+ VCNA++ MYAKC + A VF + D +SWN++I
Sbjct: 379 KANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVK-DIISWNTMIG----------- 426
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
++KPD T V+ ACA +++LE ++H YI + G + D V N L+D+
Sbjct: 427 ----------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDL 476
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y+KCG LG AR LF+ + + D+VSW+ +I GY G G+EA+ F MR G+ P+ V+
Sbjct: 477 YVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 536
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
+ +L ACSH GL+E+G + IM+N++ I P EH +C+VDLL+R G + +A +F+ +
Sbjct: 537 ISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLP 596
Query: 566 CDADIVVWKSLL 577
D +W +LL
Sbjct: 597 IAPDATIWGALL 608
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 221/445 (49%), Gaps = 43/445 (9%)
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
T+GS+++ C+GL S G+++H+ + + G L++ Y + + R VF +
Sbjct: 101 TYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTM 160
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG--AYQPNEFIFGSVFSACSNFARIL 255
+K+V W M++ ++K+G E++C F M+ G +P S F L
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPE-----SAFE--------L 207
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F+++ D+ SWN++I+G S+ + ++ +M + D T+ S+L C TL
Sbjct: 208 FDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTL 267
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
G VHS IK F+ + N +L MY+KC L AL VF+++G+ + VSW S+IA
Sbjct: 268 SLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER-NVVSWTSMIAG 326
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
+ +++ +L +M +K D + ++ ACA+ SL+ +H YI + +
Sbjct: 327 YTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESN 386
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
+FV N LMD+Y KCGS+ +A +F+ M D++SW+++I G+
Sbjct: 387 LFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI--------GE----------- 427
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
+ P+ T+ VL AC+ + +E G +H Y I+ N Y R + +VDL + G
Sbjct: 428 --LKPDSRTMACVLPACASLSALERGKEIHGY-ILRNGYS--SDRHVANALVDLYVKCGV 482
Query: 554 VHEAEDFINQMACDADIVVWKSLLA 578
+ A + M D+V W ++A
Sbjct: 483 LGLAR-LLFDMIPSKDLVSWTVMIA 506
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 209/425 (49%), Gaps = 28/425 (6%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I + +T ++ C++ +L LG+ VH + S + + N +L+MY KCG L+ A
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F+KM +RNVVSWT+MIAG +++ + + AIKL QM + GV SI+ AC+ G
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSG 366
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
S+ G+ +H ++ + S+L NAL+ MY K + A +VFS + KD+ SW +MI
Sbjct: 367 SLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG 426
Query: 211 AFSKLGY----------ELEALCHFNEMLHHG-----AYQPNEFIFGS---VFSACS--N 250
L AL E+ HG Y + + + ++ C
Sbjct: 427 ELKPDSRTMACVLPACASLSALERGKEI--HGYILRNGYSSDRHVANALVDLYVKCGVLG 484
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
AR+LF+ I S DL SW +IAG H NEA++ F+EMRD + PD ++ S+L AC
Sbjct: 485 LARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 544
Query: 311 GRLTLYQGMQVHSYIIKMGF--DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS 368
L QG + YI+K F + + ++ + ++ L A + L D+
Sbjct: 545 HSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATI 603
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC-AKMASLEMVTQLHCYI 427
W +++ C ++ E ++ R+ +++P++ + ++ A+ E V +L I
Sbjct: 604 WGALLCGCRNYHDIELAEKVAERVF--ELEPENTGYYVLLANIYAEAEKWEEVKRLREKI 661
Query: 428 TKTGL 432
K GL
Sbjct: 662 GKQGL 666
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 169/393 (43%), Gaps = 61/393 (15%)
Query: 240 IFGSVFSACSNFARILFNEIDSPD--LASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
IF +FS+C RI + D + +NA I + AM L + EL
Sbjct: 41 IFSPIFSSCIPI-RISATPTRTIDHQVTDYNAKILHFCQLGDLENAMELICMCQKSEL-- 97
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYI------------------------IKMG---F 330
+ T S+L C G + G +VHS I +K G F
Sbjct: 98 ETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVF 157
Query: 331 DS----NVPVCNAILTMYAKCSVLCNALLVFKEL------GKNADS-------------V 367
D+ NV + N +++ YAK ++ +FK + GK +S +
Sbjct: 158 DTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVI 217
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
SWNS+I+ + + E ++ +M+ I D T V+ CA +L + +H
Sbjct: 218 SWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLA 277
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K+ + N L+D+Y KCG L A ++F M +VVSW+S+I GY + G D A+
Sbjct: 278 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAI 337
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVV 545
KL +M GV ++V + +L AC+ G ++ G +H Y N + C+ ++
Sbjct: 338 KLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFV---CNALM 394
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
D+ A+ G + A + M DI+ W +++
Sbjct: 395 DMYAKCGSMEAANSVFSTMVV-KDIISWNTMIG 426
>gi|413918395|gb|AFW58327.1| hypothetical protein ZEAMMB73_709604 [Zea mays]
Length = 906
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/625 (27%), Positives = 308/625 (49%), Gaps = 89/625 (14%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS---LEDARMGF 93
T A ++ AC+ R LQ GR VH +++ + + D + N +++MY KCG + DA F
Sbjct: 177 TVAVIVPACAKWRHLQTGRSVHCYVVKTGLESDTLCGNALVSMYAKCGGSRVMVDAHRAF 236
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG-SV 152
+ ++VVSW ++IAG +N +A+ L+ QM+ G +P T SI+ CS
Sbjct: 237 SSIRCKDVVSWNSVIAGYIENQLFGEALALFSQMISQGYLPNYSTVASILPVCSFTEFGR 296
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+++H+ V++ + NAL+ Y+K + D ++F+ + +D+ SW ++IA +
Sbjct: 297 HHGKEVHSFVVRHGMEIDVSVSNALMTHYSKVLEMKDVESIFTSMDVRDIVSWNTIIAGY 356
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN--------------FARIL--- 255
GY AL F +L G P+ F S+ +AC+ F R +
Sbjct: 357 VMNGYHHRALGLFQGLLSTG-IAPDSVSFISLLTACAQVGDVKTGMEVHGYIFQRPVLQE 415
Query: 256 -----------------------FNEIDSPDLASWNALIAGVA-SHSNANEAMSLFSEM- 290
F +I + D SWNA+++ A S + + L SEM
Sbjct: 416 TSLMNALVTFYSHCDRFDDAFRAFTDILNKDSISWNAILSACATSEQHIEKFFVLMSEMC 475
Query: 291 -RDRELLPDGLTVHSLLCACIGRLTLYQGMQV----HSYIIKMGFDSNVPVCNAILTMYA 345
+ D +TV +++ ++ + G+++ H + +++G+ V NAIL Y
Sbjct: 476 RGVNQCQWDSVTVLNVI-----HMSTFCGIKMVREAHGWSLRVGYTGETSVANAILDAYV 530
Query: 346 KCSVLCNALLVFK-ELGKN-----------------------------ADSVSWNSIIAA 375
KC +A ++F+ G+N D SWN +I
Sbjct: 531 KCGYSHDASILFRNHAGRNIVTDNIMISCYLKSNCIEDAEVIFNHMAEKDLTSWNLMIQL 590
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
Q++ + F LF+ + + +KPD ++ +++ AC + S+++V Q H Y+ + L D
Sbjct: 591 YAQNDMDGQAFSLFNHLQSEGLKPDIVSIANILEACIHLCSVQLVRQCHAYMLRASLE-D 649
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
+ + L+D Y KCG++ +A +F D+V+++++I YA G +EA++LF++M
Sbjct: 650 IHLEGALVDAYSKCGNITNAYNIFQISPKKDLVTFTAMIGCYAMHGMAEEAVELFSKMLK 709
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
L + P+ V L +L+ACSH GLV+ G+ +++ + + ++PT EH +C+VDLLAR+G +
Sbjct: 710 LDIRPDHVVLTTLLSACSHAGLVDAGIKIFKSIREIHRVVPTAEHYACMVDLLARSGHIQ 769
Query: 556 EAEDFINQMACDA-DIVVWKSLLAS 579
+A F M A + W SLL +
Sbjct: 770 DAYMFALDMPPHAVNANAWSSLLGA 794
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 152/525 (28%), Positives = 243/525 (46%), Gaps = 84/525 (16%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV--- 132
+++ YG+ GSL DA + FD+M + + V W +I CS+ DA L+ ML GV
Sbjct: 112 VMDAYGRFGSLADALLLFDEMARPDAVCWNILITACSRRGLFEDAFILFRSMLSCGVGQG 171
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK--FDRIL-D 189
MP T I+ AC+ + GR +H +V+K+ S + NAL++MY K R++ D
Sbjct: 172 MPTAVTVAVIVPACAKWRHLQTGRSVHCYVVKTGLESDTLCGNALVSMYAKCGGSRVMVD 231
Query: 190 ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
A FS I KDV SW S+IA + + EAL F++M+ G Y PN S+ CS
Sbjct: 232 AHRAFSSIRCKDVVSWNSVIAGYIENQLFGEALALFSQMISQG-YLPNYSTVASILPVCS 290
Query: 250 ---------------------------------NFARIL--------FNEIDSPDLASWN 268
+++++L F +D D+ SWN
Sbjct: 291 FTEFGRHHGKEVHSFVVRHGMEIDVSVSNALMTHYSKVLEMKDVESIFTSMDVRDIVSWN 350
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
+IAG + + A+ LF + + PD ++ SLL AC + GM+VH YI +
Sbjct: 351 TIIAGYVMNGYHHRALGLFQGLLSTGIAPDSVSFISLLTACAQVGDVKTGMEVHGYIFQR 410
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-AEELFR 387
+ NA++T Y+ C +A F ++ N DS+SWN+I++AC Q E+ F
Sbjct: 411 PVLQETSLMNALVTFYSHCDRFDDAFRAFTDI-LNKDSISWNAILSACATSEQHIEKFFV 469
Query: 388 LFSRML--ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
L S M +Q + D +T +V+ + ++MV + H + + G + V N ++D
Sbjct: 470 LMSEMCRGVNQCQWDSVTVLNVIHM-STFCGIKMVREAHGWSLRVGYTGETSVANAILDA 528
Query: 446 YIKCG-------------------------------SLGSARKLFNFMENPDVVSWSSLI 474
Y+KCG + A +FN M D+ SW+ +I
Sbjct: 529 YVKCGYSHDASILFRNHAGRNIVTDNIMISCYLKSNCIEDAEVIFNHMAEKDLTSWNLMI 588
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
YAQ +A LF ++S G+ P++V++ +L AC H+ V+
Sbjct: 589 QLYAQNDMDGQAFSLFNHLQSEGLKPDIVSIANILEACIHLCSVQ 633
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 147/281 (52%), Gaps = 8/281 (2%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD---RELLPDGLTVHSLLCA 308
A +LF+E+ PD WN LI + +A LF M + +P +TV ++ A
Sbjct: 125 ALLLFDEMARPDAVCWNILITACSRRGLFEDAFILFRSMLSCGVGQGMPTAVTVAVIVPA 184
Query: 309 CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS---VLCNALLVFKELGKNAD 365
C L G VH Y++K G +S+ NA+++MYAKC V+ +A F + + D
Sbjct: 185 CAKWRHLQTGRSVHCYVVKTGLESDTLCGNALVSMYAKCGGSRVMVDAHRAFSSI-RCKD 243
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA-SLEMVTQLH 424
VSWNS+IA +++ E LFS+M++ P++ T ++ C+ ++H
Sbjct: 244 VVSWNSVIAGYIENQLFGEALALFSQMISQGYLPNYSTVASILPVCSFTEFGRHHGKEVH 303
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
++ + G+ DV V N LM Y K + +F M+ D+VSW+++I GY G
Sbjct: 304 SFVVRHGMEIDVSVSNALMTHYSKVLEMKDVESIFTSMDVRDIVSWNTIIAGYVMNGYHH 363
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
AL LF + S G++P+ V+ + +LTAC+ VG V+ G+ ++
Sbjct: 364 RALGLFQGLLSTGIAPDSVSFISLLTACAQVGDVKTGMEVH 404
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/484 (23%), Positives = 210/484 (43%), Gaps = 78/484 (16%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRI-RPSTYAGLISACSSLR-SLQLGRKVHDH 60
N ++ + L+ EAL FSQ + + ST A ++ CS G++VH
Sbjct: 248 NSVIAGYIENQLFGEALAL--FSQMISQGYLPNYSTVASILPVCSFTEFGRHHGKEVHSF 305
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
++ + DV + N ++ Y K ++D F M R++VSW +IAG N + A
Sbjct: 306 VVRHGMEIDVSVSNALMTHYSKVLEMKDVESIFTSMDVRDIVSWNTIIAGYVMNGYHHRA 365
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ L+ +L +G+ P +F S++ AC+ +G V G ++H ++ + NAL+
Sbjct: 366 LGLFQGLLSTGIAPDSVSFISLLTACAQVGDVKTGMEVHGYIFQRPVLQETSLMNALVTF 425
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL-------------CHFNE 227
Y+ DR DA F+ I KD SW ++++A + +E C ++
Sbjct: 426 YSHCDRFDDAFRAFTDILNKDSISWNAILSACATSEQHIEKFFVLMSEMCRGVNQCQWDS 485
Query: 228 -----MLH-------------HG-----AYQPNEFIFGSVFSA-----CSNFARILFNEI 259
++H HG Y + ++ A S+ A ILF
Sbjct: 486 VTVLNVIHMSTFCGIKMVREAHGWSLRVGYTGETSVANAILDAYVKCGYSHDASILFRNH 545
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL----------------------- 296
++ + N +I+ + +A +F+ M +++L
Sbjct: 546 AGRNIVTDNIMISCYLKSNCIEDAEVIFNHMAEKDLTSWNLMIQLYAQNDMDGQAFSLFN 605
Query: 297 --------PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
PD +++ ++L ACI ++ Q H+Y+++ + ++ + A++ Y+KC
Sbjct: 606 HLQSEGLKPDIVSIANILEACIHLCSVQLVRQCHAYMLRASLE-DIHLEGALVDAYSKCG 664
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ NA +F ++ D V++ ++I H AEE LFS+ML I+PDH+ ++
Sbjct: 665 NITNAYNIF-QISPKKDLVTFTAMIGCYAMHGMAEEAVELFSKMLKLDIRPDHVVLTTLL 723
Query: 409 GACA 412
AC+
Sbjct: 724 SACS 727
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/476 (20%), Positives = 198/476 (41%), Gaps = 85/476 (17%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
+T I ++ L++AC+ + ++ G +VH +I + L N ++ Y C +
Sbjct: 374 STGIAPDSVSFISLLTACAQVGDVKTGMEVHGYIFQRPVLQETSLMNALVTFYSHCDRFD 433
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC- 146
DA F + ++ +SW A+++ C+ + Q + + + + GV Q+ +++
Sbjct: 434 DAFRAFTDILNKDSISWNAILSACATSEQHIEKFFVLMSEMCRGVNQCQWDSVTVLNVIH 493
Query: 147 -SGLGSVCLGRQLH------------------------------AHVIKSEH-GSHLIAQ 174
S + + R+ H A ++ H G +++
Sbjct: 494 MSTFCGIKMVREAHGWSLRVGYTGETSVANAILDAYVKCGYSHDASILFRNHAGRNIVTD 553
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
N +I+ Y K + I DA +F+ +A KD+TSW MI +++ + +A FN + G
Sbjct: 554 NIMISCYLKSNCIEDAEVIFNHMAEKDLTSWNLMIQLYAQNDMDGQAFSLFNHLQSEG-L 612
Query: 235 QPNEFIFGSVFSACSNFARI---------------------------------------L 255
+P+ ++ AC + + +
Sbjct: 613 KPDIVSIANILEACIHLCSVQLVRQCHAYMLRASLEDIHLEGALVDAYSKCGNITNAYNI 672
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F DL ++ A+I A H A EA+ LFS+M ++ PD + + +LL AC +
Sbjct: 673 FQISPKKDLVTFTAMIGCYAMHGMAEEAVELFSKMLKLDIRPDHVVLTTLLSACSHAGLV 732
Query: 316 YQGMQVHSYIIKMGFDSNVPVCN---AILTMYAKCSVLCNALLVFKELGKNA-DSVSWNS 371
G+++ I ++ VP ++ + A+ + +A + ++ +A ++ +W+S
Sbjct: 733 DAGIKIFKSIREI--HRVVPTAEHYACMVDLLARSGHIQDAYMFALDMPPHAVNANAWSS 790
Query: 372 IIAACLQHNQAE----ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
++ AC H + E RLFS M I +++ +++ A K +E V +L
Sbjct: 791 LLGACKVHGKVEIGQLAAGRLFS-MEGGDIG-NYVIMSNIYAADEKWDGVENVRKL 844
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 423 LHCYITKTG-LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
LH K G +A V +MD Y + GSL A LF+ M PD V W+ LI ++ G
Sbjct: 92 LHGLAVKAGRVASSATVAKAVMDAYGRFGSLADALLLFDEMARPDAVCWNILITACSRRG 151
Query: 482 CGDEALKLFTRMRSLGVS---PNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIP 536
++A LF M S GV P VT+ ++ AC+ ++ G +H Y + + G+
Sbjct: 152 LFEDAFILFRSMLSCGVGQGMPTAVTVAVIVPACAKWRHLQTGRSVHCYVV---KTGLES 208
Query: 537 TREHCSCVVDLLARAG---CVHEAEDFINQMACDADIVVWKSLLA 578
+ +V + A+ G + +A + + C D+V W S++A
Sbjct: 209 DTLCGNALVSMYAKCGGSRVMVDAHRAFSSIRCK-DVVSWNSVIA 252
>gi|449464466|ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
[Cucumis sativus]
Length = 1830
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 163/563 (28%), Positives = 268/563 (47%), Gaps = 69/563 (12%)
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
K H +++ +++ ++ +YG G + ARM FD+MP + +W MI N
Sbjct: 1138 KFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIRWYFLND 1197
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
D I Y +M S F I+KACS L + GR++H ++K G
Sbjct: 1198 LFVDVIPFYNRMRMSFRECDNIIFSIILKACSELREIVEGRKVHCQIVKV-GGPDSFVMT 1256
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
LI MY K ++ + VF I K+V SW SMIA + + E L FN M +
Sbjct: 1257 GLIDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRM-RDALVE 1315
Query: 236 PNEFIFGSVFSACSNF----------------------------------------ARIL 255
N F GS+ +A + AR++
Sbjct: 1316 SNPFTLGSIINAFTKLRALHQGKWVHGYAIKNIAELSSFLATTFLDMYVKCGQTRDARMI 1375
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
++E+ + DL SW +I G N+ + LF++ +LLP+
Sbjct: 1376 YDELPTIDLVSWTVMIVGYTQARQPNDGLRLFADEIRSDLLPNSAL-------------- 1421
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
+QV F V NA++ MYAKC + +A +F + + D ++WNS+I+
Sbjct: 1422 ---LQV--------FFQRVRFLNALIDMYAKCHTISDAYAIFHGVLEK-DVITWNSMISG 1469
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL-AF 434
Q+ A + RLF++M + + PD IT + A A + ++++ + LH Y K GL +
Sbjct: 1470 YAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSS 1529
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
++++ L++ Y KCG SAR +F+ M ++++WS++I GY G G +L +F+ M
Sbjct: 1530 NLYIGTALLNFYAKCGDARSARMVFDSMGVKNIITWSAMIGGYGVQGDGSGSLSIFSNML 1589
Query: 495 SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCV 554
+ PN V VL+ACS+ G+VEEG ++ M +Y +P+ +H +C+VDLLAR+G +
Sbjct: 1590 KEDLKPNEVIFTTVLSACSYSGMVEEGGRYFKSMIQDYNFVPSMKHYACMVDLLARSGKL 1649
Query: 555 HEAEDFINQMACDADIVVWKSLL 577
EA DFI +M D+ ++ + L
Sbjct: 1650 DEALDFIKKMPVQRDVSLYGAFL 1672
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 202/397 (50%), Gaps = 19/397 (4%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
++ ++ ACS LR + GRKVH I+ PD + +++MYGKCG +E + F+++
Sbjct: 1221 FSIILKACSELREIVEGRKVHCQIV-KVGGPDSFVMTGLIDMYGKCGQVECSSAVFEEIM 1279
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+NVVSWT+MIAG QN + + L+ +M + V FT GSII A + L ++ G+
Sbjct: 1280 DKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALVESNPFTLGSIINAFTKLRALHQGKW 1339
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H + IK+ + MY K + DAR ++ + D+ SW MI +++
Sbjct: 1340 VHGYAIKNIAELSSFLATTFLDMYVKCGQTRDARMIYDELPTIDLVSWTVMIVGYTQARQ 1399
Query: 218 ELEALCHF----------NEMLHHGAYQPNEFIFG--SVFSACSNF--ARILFNEIDSPD 263
+ L F N L +Q F+ +++ C A +F+ + D
Sbjct: 1400 PNDGLRLFADEIRSDLLPNSALLQVFFQRVRFLNALIDMYAKCHTISDAYAIFHGVLEKD 1459
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+ +WN++I+G A + +A +A+ LF++MR L PD +T+ S L A + G +H+
Sbjct: 1460 VITWNSMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHA 1519
Query: 324 YIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQHNQ 381
Y +K G F SN+ + A+L YAKC +A +VF +G KN ++W+++I
Sbjct: 1520 YSVKGGLFSSNLYIGTALLNFYAKCGDARSARMVFDSMGVKNI--ITWSAMIGGYGVQGD 1577
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+FS ML +KP+ + F V+ AC+ +E
Sbjct: 1578 GSGSLSIFSNMLKEDLKPNEVIFTTVLSACSYSGMVE 1614
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 182/417 (43%), Gaps = 77/417 (18%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
++ + N E LV ++ + + P T +I+A + LR+L G+ VH + + +
Sbjct: 1290 IAGYVQNNCAEEGLVLFN-RMRDALVESNPFTLGSIINAFTKLRALHQGKWVHGYAIKNI 1348
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ L L+MY KCG DARM +D++P ++VSWT MI G +Q Q ND ++L+
Sbjct: 1349 AELSSFLATTFLDMYVKCGQTRDARMIYDELPTIDLVSWTVMIVGYTQARQPNDGLRLFA 1408
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
++S ++P S L V R + NALI MY K
Sbjct: 1409 DEIRSDLLPN-----------SALLQVFFQR--------------VRFLNALIDMYAKCH 1443
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG------------- 232
I DA +F G+ KDV +W SMI+ +++ G +AL FN+M +
Sbjct: 1444 TISDAYAIFHGVLEKDVITWNSMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLS 1503
Query: 233 ---------------AYQPNEFIFGS---VFSACSNF---------ARILFNEIDSPDLA 265
AY +F S + +A NF AR++F+ + ++
Sbjct: 1504 ASATLGAIQVGSSLHAYSVKGGLFSSNLYIGTALLNFYAKCGDARSARMVFDSMGVKNII 1563
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM--QVHS 323
+W+A+I G + + ++S+FS M +L P+ + ++L AC Y GM +
Sbjct: 1564 TWSAMIGGYGVQGDGSGSLSIFSNMLKEDLKPNEVIFTTVLSACS-----YSGMVEEGGR 1618
Query: 324 YIIKMGFDSN-VPVCN---AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
Y M D N VP ++ + A+ L AL K++ D + + + C
Sbjct: 1619 YFKSMIQDYNFVPSMKHYACMVDLLARSGKLDEALDFIKKMPVQRDVSLYGAFLHGC 1675
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 130/263 (49%), Gaps = 12/263 (4%)
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
++ H +I G N+ ++ +Y + +A +VF ++ N D +W +I
Sbjct: 1137 IKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQM-PNPDFYAWKVMIRWYFL 1195
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
++ ++ ++RM S + D+I F+ ++ AC+++ + ++HC I K G D FV
Sbjct: 1196 NDLFVDVIPFYNRMRMSFRECDNIIFSIILKACSELREIVEGRKVHCQIVKVG-GPDSFV 1254
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
M GL+D+Y KCG + + +F + + +VVSW+S+I GY Q C +E L LF RMR V
Sbjct: 1255 MTGLIDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALV 1314
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCS----CVVDLLARAGCV 554
N TL ++ A + + + +G ++ Y I E S +D+ + G
Sbjct: 1315 ESNPFTLGSIINAFTKLRALHQGKWVH-----GYAIKNIAELSSFLATTFLDMYVKCGQT 1369
Query: 555 HEAEDFINQMACDADIVVWKSLL 577
+A +++ D+V W ++
Sbjct: 1370 RDARMIYDELPT-IDLVSWTVMI 1391
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 5/164 (3%)
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+++ + + H + GL ++ L+ +Y G + SAR +F+ M NPD +W +I
Sbjct: 1132 NIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIR 1191
Query: 476 GYAQFGCGDEALKLFTRMR-SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
Y + + + RMR S N++ + +L ACS + + EG ++ + G
Sbjct: 1192 WYFLNDLFVDVIPFYNRMRMSFRECDNIIFSI-ILKACSELREIVEGRKVHCQIVKVGG- 1249
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
P + ++D+ + G V E + + D ++V W S++A
Sbjct: 1250 -PDSFVMTGLIDMYGKCGQV-ECSSAVFEEIMDKNVVSWTSMIA 1291
>gi|302793458|ref|XP_002978494.1| hypothetical protein SELMODRAFT_108969 [Selaginella moellendorffii]
gi|300153843|gb|EFJ20480.1| hypothetical protein SELMODRAFT_108969 [Selaginella moellendorffii]
Length = 644
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/590 (29%), Positives = 299/590 (50%), Gaps = 30/590 (5%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S+ + + EAL + + + ++ T + +++ACS L R +H I+ +
Sbjct: 31 ISAYAQNGHFREALQLFQ-AMDLEGMQPNSFTLSSVVAACSGLEDPLQARAIHSRIVGAG 89
Query: 66 CQPDVVLQNHILNMYGKC-GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
D + ++ M+ +C G DA+ FD M R+VVSW A+I+G + +++ A++L
Sbjct: 90 FGSDEFVATAMVAMFSRCDGCWIDAKAVFDGMASRSVVSWNAVISGAIRGGEKDQALRLL 149
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
+M G P QF+ +I+ ACS SV R+ HA + S + L QN+L+ Y K
Sbjct: 150 WRMDNEGTKPDQFSLTTILSACS---SVRECREFHARIQASGFQAMLAVQNSLMDCYGKC 206
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY------QPNE 238
+ DA+ VF + +DV SW +IA++ EA+ + E++ A QPN
Sbjct: 207 GSLRDAKMVFDEMVERDVISWTCLIASYVHNDESREAIAIY-ELMEESARRSLSSLQPNV 265
Query: 239 FIFGSVFSACS-----NFARILFNEIDSPDLASWNALIAGVASHSNANEA--MSLFSEMR 291
F +V ACS R L++ I+ +A+WN +IA +A ++ A + LF EM
Sbjct: 266 CTFTAVAEACSIVGALEQGRALYSRIN---VAAWNFVIASIAQADSSAAADVLELFGEMA 322
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
DG+T + L C + +G +HS+ G D V A++ MY++ L
Sbjct: 323 LEGTKADGVTFAAALGVCTNHVD--RGKSLHSFARDAGLDRENAVGAALIAMYSRSGRLD 380
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM-LASQIKPDHITFNDVMGA 410
A F+++ + V+W+S++ Q + +L+ M L S++ PD TF+ ++G
Sbjct: 381 EAWTAFEKI-REKSVVAWSSLMTGYAQQGKNWRALQLYEEMILESEVLPDKFTFSTILGV 439
Query: 411 CAKMASLEMVTQLHCYITK-TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
CA++ + E ++H + G D + L+D++ KCG++ +A+ +F+ M +V +
Sbjct: 440 CAELGAAEEGRRVHSQMLACLGFERDAVLGTSLIDMFAKCGNIDAAKLVFDGMLERNVQT 499
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W++L+ G A+ G G++A+ RM G + T+ +L C+H GL++ G +R+
Sbjct: 500 WTTLVAGLARHGRGEQAVWWLRRMSMEGFCADQATVTTILHGCNHGGLIDAGRCCFRLAG 559
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EYGI + EH CVVDLL RAG + +AE M D W+ LL +
Sbjct: 560 GEYGIQASCEHYDCVVDLLGRAGRLKDAESLAAAM---DDQAPWRILLGA 606
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 245/514 (47%), Gaps = 23/514 (4%)
Query: 79 MYGKCGSLEDARMGFDKMPQR-NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQF 137
MYGKC S+ +AR FD + R NV SW+ +I+ +QN +A++L+ M G+ P F
Sbjct: 1 MYGKCRSVVEARQVFDALGWRKNVFSWSIIISAYAQNGHFREALQLFQAMDLEGMQPNSF 60
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR-ILDARNVFSG 196
T S++ ACSGL R +H+ ++ + GS A++AM+++ D +DA+ VF G
Sbjct: 61 TLSSVVAACSGLEDPLQARAIHSRIVGAGFGSDEFVATAMVAMFSRCDGCWIDAKAVFDG 120
Query: 197 IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----- 251
+A + V SW ++I+ + G + +AL M + G +P++F ++ SACS+
Sbjct: 121 MASRSVVSWNAVISGAIRGGEKDQALRLLWRMDNEGT-KPDQFSLTTILSACSSVRECRE 179
Query: 252 --ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
ARI + + LA N+L+ + +A +F EM +R+++ + S +
Sbjct: 180 FHARIQASGFQAM-LAVQNSLMDCYGKCGSLRDAKMVFDEMVERDVISWTCLIASYVHND 238
Query: 310 IGR--LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
R + +Y+ M+ + NV A+ CS++ AL + L +
Sbjct: 239 ESREAIAIYELMEESARRSLSSLQPNVCTFTAVAE---ACSIV-GALEQGRALYSRINVA 294
Query: 368 SWNSII--AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
+WN +I A + A ++ LF M K D +TF +G C ++ LH
Sbjct: 295 AWNFVIASIAQADSSAAADVLELFGEMALEGTKADGVTFAAALGVCTN--HVDRGKSLHS 352
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
+ GL + V L+ +Y + G L A F + VV+WSSL+ GYAQ G
Sbjct: 353 FARDAGLDRENAVGAALIAMYSRSGRLDEAWTAFEKIREKSVVAWSSLMTGYAQQGKNWR 412
Query: 486 ALKLFTRM-RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV 544
AL+L+ M V P+ T +L C+ +G EEG ++ M G + +
Sbjct: 413 ALQLYEEMILESEVLPDKFTFSTILGVCAELGAAEEGRRVHSQMLACLGFERDAVLGTSL 472
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+D+ A+ G + A+ + M + ++ W +L+A
Sbjct: 473 IDMFAKCGNIDAAKLVFDGM-LERNVQTWTTLVA 505
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 163/543 (30%), Positives = 265/543 (48%), Gaps = 53/543 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY +IS S RKV + + D++ N +L+ Y K G+L AR F++M
Sbjct: 93 TYNAMISGYLSNNKFDCARKVFEKM----PDRDLISWNVMLSGYVKNGNLSAARALFNQM 148
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+++VVSW AM++G +QN +A K++ QML + + ++ ++ A G + R
Sbjct: 149 PEKDVVSWNAMLSGFAQNGFVEEARKIFDQML----VKNEISWNGLLSAYVQNGRIEDAR 204
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+L S+ +++ N L+ Y + R+ DAR++F + +D SW MI +++ G
Sbjct: 205 RL----FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNG 260
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVAS 276
EA F E+ + + G V + + A +F E+ + SWNA+IAG
Sbjct: 261 LLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQ 320
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
+A LF +M R N
Sbjct: 321 SQQIEKARELFDQMPSR---------------------------------------NTSS 341
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
N ++T YA+C + A ++F E+ + D +SW ++I+ Q Q+EE LF +M
Sbjct: 342 WNTMVTGYAQCGNIDQAKILFDEMPQR-DCISWAAMISGYAQSGQSEEALHLFIKMKRDG 400
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
+ + +CA++A+LE+ QLH + K G N L+ +Y KCGS+ A
Sbjct: 401 GILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAF 460
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
+F + D+VSW+++I GYA+ G G EAL LF M+ + + P+ VTLVGVL+ACSH G
Sbjct: 461 DVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSHTG 519
Query: 517 LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
V++G+ + M YGI +H +C++DLL RAG + EA + + M D W +L
Sbjct: 520 FVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGAL 579
Query: 577 LAS 579
L +
Sbjct: 580 LGA 582
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 202/448 (45%), Gaps = 71/448 (15%)
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
L+++N S I D+ W I+A+ + G AL FN M N I G + +
Sbjct: 46 LESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNN 105
Query: 248 CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE------------- 294
+ AR +F ++ DL SWN +++G + N + A +LF++M +++
Sbjct: 106 KFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQ 165
Query: 295 --------------LLPDGLTVHSLLCACI--GRLT----LYQGMQ----------VHSY 324
L+ + ++ + LL A + GR+ L+ + Y
Sbjct: 166 NGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGY 225
Query: 325 IIKMGFD------SNVPV-----CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
+ K D +PV N ++T YA+ +L A +F+EL D +W +++
Sbjct: 226 VRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIR-DVFAWTAMV 284
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
+ +Q+ +E R+F M + + +++N ++ + +E +L + +
Sbjct: 285 SGFVQNGMLDEATRIFEEM----PEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTS 340
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
N ++ Y +CG++ A+ LF+ M D +SW+++I GYAQ G +EAL LF +M
Sbjct: 341 ----SWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKM 396
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEY--GIIPTREHCSCVVDLLAR 550
+ G N L L++C+ + +E G L+ R+++ + G I + ++ + +
Sbjct: 397 KRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAG----NALLAMYGK 452
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLA 578
G + EA D + + DIV W +++A
Sbjct: 453 CGSIEEAFDVFEDI-TEKDIVSWNTMIA 479
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 98/182 (53%), Gaps = 11/182 (6%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S A +S+C+ + +L+LG+++H ++ + Q + N +L MYGKCGS+E+A F+
Sbjct: 406 SALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFED 465
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ ++++VSW MIAG +++ +A+ L+ M + + P T ++ ACS G V G
Sbjct: 466 ITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKG 524
Query: 156 RQLHAHVIKSEHGSHLIAQNA-----LIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMI 209
+ S + ++ I NA +I + + R+ +A N+ + D +WG+++
Sbjct: 525 MEY----FNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALL 580
Query: 210 AA 211
A
Sbjct: 581 GA 582
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 151/482 (31%), Positives = 244/482 (50%), Gaps = 36/482 (7%)
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
N+ W +I S ++ L+ QML SG+ P TF S+ K+C+ + +QLH
Sbjct: 91 NIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLH 150
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
AH +K H +LI MY++ + AR VF +D S+ ++I + G
Sbjct: 151 AHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEG--- 207
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSN 279
H ++ AR LF+EI + D+ SWNA+IAG
Sbjct: 208 ----HVDD------------------------ARRLFDEIPAKDVVSWNAMIAGYVQSGR 239
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
EA++ F+ M++ ++ P+ T+ S+L AC +L G + S++ GF N+ + NA
Sbjct: 240 FEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNA 299
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
++ MY+KC + A +F + ++ D + WN++I + EE LF ML + P
Sbjct: 300 LVDMYSKCGEIGTARKLFDGM-EDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTP 358
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITK----TGLAFDVFVMNGLMDIYIKCGSLGSA 455
+ +TF V+ ACA + +L++ +H YI K TG +V + ++ +Y KCG + A
Sbjct: 359 NDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVA 418
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
++F M + + SW+++I G A G + AL LF M + G P+ +T VGVL+AC+
Sbjct: 419 EQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQA 478
Query: 516 GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
G VE G + M +YGI P +H C++DLLAR+G EA+ + M + D +W S
Sbjct: 479 GFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGS 538
Query: 576 LL 577
LL
Sbjct: 539 LL 540
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 179/364 (49%), Gaps = 36/364 (9%)
Query: 250 NFARILFNEI--DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC 307
++A LF+ I P++ WN LI + ++ LFS+M L P+ T SL
Sbjct: 76 SYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFK 135
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF-KELGKNA-- 364
+C ++ Q+H++ +K+ + V +++ MY++ L +A LVF K ++A
Sbjct: 136 SCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVS 195
Query: 365 ---------------------------DSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
D VSWN++IA +Q + EE F+RM + +
Sbjct: 196 FTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADV 255
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
P+ T V+ AC + SLE+ + ++ G ++ ++N L+D+Y KCG +G+ARK
Sbjct: 256 SPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARK 315
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
LF+ ME+ DV+ W+++I GY +EAL LF M V+PN VT + VL AC+ +G
Sbjct: 316 LFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGA 375
Query: 518 VEEGLHLYRIMENEY---GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
++ G ++ ++ G + + ++ + A+ GCV AE M + + W
Sbjct: 376 LDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRS-LASWN 434
Query: 575 SLLA 578
++++
Sbjct: 435 AMIS 438
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 179/410 (43%), Gaps = 57/410 (13%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ + P + LI S + L+ R V D L D V ++ Y G ++DAR
Sbjct: 158 LHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLR----DAVSFTALITGYVSEGHVDDAR 213
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD++P ++VVSW AMIAG Q+ + +A+ + +M ++ V P Q T S++ AC L
Sbjct: 214 RLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLR 273
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
S+ LG+ + + V G +L NAL+ MY+K I AR +F G+ KDV W +MI
Sbjct: 274 SLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIG 333
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------- 251
+ L EAL F ML PN+ F +V AC++
Sbjct: 334 GYCHLSLYEEALVLFEVMLRENV-TPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKG 392
Query: 252 -------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
A +F + S LASWNA+I+G+A + +A A+ L
Sbjct: 393 TGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGL 452
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYA 345
F EM + PD +T +L AC + G + S + K G + ++ + A
Sbjct: 453 FEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLA 512
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRL 388
+ A ++ + D W S++ AC H Q AE LF L
Sbjct: 513 RSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFEL 562
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 113/260 (43%), Gaps = 39/260 (15%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + C +LY EALV ++ N+ T+ ++ AC+SL +L LG+ VH +I
Sbjct: 329 NTMIGGYCHLSLYEEALVLFEVMLRE-NVTPNDVTFLAVLPACASLGALDLGKWVHAYID 387
Query: 63 L----SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
+ +V L I+ MY KCG +E A F M R++ SW AMI+G + N
Sbjct: 388 KNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAE 447
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
A+ L+ +M+ G P TF ++ AC+ G V LG
Sbjct: 448 RALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGH---------------------- 485
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
R + N GI+ K + +G MI ++ G EA M +P+
Sbjct: 486 -------RYFSSMNKDYGISPK-LQHYGCMIDLLARSGKFDEAKVLMGNM----EMEPDG 533
Query: 239 FIFGSVFSACSNFARILFNE 258
I+GS+ +AC ++ F E
Sbjct: 534 AIWGSLLNACRIHGQVEFGE 553
>gi|302762016|ref|XP_002964430.1| hypothetical protein SELMODRAFT_61701 [Selaginella moellendorffii]
gi|300168159|gb|EFJ34763.1| hypothetical protein SELMODRAFT_61701 [Selaginella moellendorffii]
Length = 603
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 161/573 (28%), Positives = 289/573 (50%), Gaps = 54/573 (9%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ 113
G+ H H L + + L N ++ MY +CG + +A+ FD + +NV +WT ++ G +
Sbjct: 2 GKWGHAHALSHGHRSNRYLGNCLMIMYNRCGYVHEAQKIFDDIVWKNVFTWTVLMKGYAD 61
Query: 114 NYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA 173
+ ++ L+ +ML G ++TF + L + GR +H + S + A
Sbjct: 62 FGEFERSVALFREMLARGEPANEYTFSCALTCLGALRMLEQGRVVHGIAREMSFSSRITA 121
Query: 174 QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG--YELEALCHFNEMLHH 231
NALI+MY K I DA+NVF + ++V +W ++IAA+++ G E+E L E+
Sbjct: 122 GNALISMYGKCGSIPDAKNVFDSMQERNVVTWNALIAAYAQNGLYREIEWLLPAMEV--- 178
Query: 232 GAYQPNEFIFGSVFSACSNF---------------------------------------A 252
+PN+ F + A +F A
Sbjct: 179 DGVRPNKISFMGISLAVPSFRDAFVSARQVHKRMFDLGLDLVGYTALVKMYGRCGQVEDA 238
Query: 253 RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
++F I D+ +W A++ A + ++ A + +M+ +P+ +T+ ++ AC
Sbjct: 239 EVVFEGIPWKDVVAWTAMVTSFAQNGFSDRAFEYYRKMQLEGRVPNKITLLGIVDACD-- 296
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
+ ++ ++ + + + F S+ V NA+L+ + + + +A FK +GK + VSWN++
Sbjct: 297 -SAHRCREIRTRMERAPFQSDTSVKNALLSRFGRLGSIDDARDAFKSIGKR-NLVSWNAM 354
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
I A +QH + EE+ + ++ K D I+F V+ CA + L + H ++ + GL
Sbjct: 355 IFALVQHQKFEEVLDAYRQLQLDGEKADRISFIGVLDGCAMLEDLVEGKKAHRHVLEKGL 414
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV--VSWSSLILGYAQFGCGDEALKLF 490
+ D + N L+++Y +C S+ AR++F +E D+ VSWSS+I YA+ G DEAL+L
Sbjct: 415 SKDRMIRNALVNMYGRCSSVEKARQVFEKIEEKDITQVSWSSMISAYARRGLPDEALELL 474
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
M LG+ P+ VT + +L+ CS+ GLV+E + +E+++G+ P EH +VD+L R
Sbjct: 475 GSMIQLGLDPDGVTFISLLSGCSYGGLVDEACQCFYSLEHDHGLKPGVEHQRIMVDVLGR 534
Query: 551 AGCVHEAEDFINQMACDADIV----VWKSLLAS 579
AG + EAE + + +I W SLL+S
Sbjct: 535 AGWLDEAEKMAGMASDEKNIEGGTGAWTSLLSS 567
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 112/215 (52%), Gaps = 6/215 (2%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T G++ AC S R++ + + Q D ++N +L+ +G+ GS++DAR F +
Sbjct: 287 TLLGIVDACDSAHRC---REIRTRMERAPFQSDTSVKNALLSRFGRLGSIDDARDAFKSI 343
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+RN+VSW AMI Q+ + + + Y Q+ G + +F ++ C+ L + G+
Sbjct: 344 GKRNLVSWNAMIFALVQHQKFEEVLDAYRQLQLDGEKADRISFIGVLDGCAMLEDLVEGK 403
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT--SWGSMIAAFSK 214
+ H HV++ + +NAL+ MY + + AR VF I KD+T SW SMI+A+++
Sbjct: 404 KAHRHVLEKGLSKDRMIRNALVNMYGRCSSVEKARQVFEKIEEKDITQVSWSSMISAYAR 463
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
G EAL M+ G P+ F S+ S CS
Sbjct: 464 RGLPDEALELLGSMIQLG-LDPDGVTFISLLSGCS 497
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 6/264 (2%)
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL-GKNADSVSWNSIIAA 375
+G H++ + G SN + N ++ MY +C + A +F ++ KN +W ++
Sbjct: 1 RGKWGHAHALSHGHRSNRYLGNCLMIMYNRCGYVHEAQKIFDDIVWKNV--FTWTVLMKG 58
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
+ E LF MLA + TF+ + + LE +H + +
Sbjct: 59 YADFGEFERSVALFREMLARGEPANEYTFSCALTCLGALRMLEQGRVVHGIAREMSFSSR 118
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
+ N L+ +Y KCGS+ A+ +F+ M+ +VV+W++LI YAQ G E L M
Sbjct: 119 ITAGNALISMYGKCGSIPDAKNVFDSMQERNVVTWNALIAAYAQNGLYREIEWLLPAMEV 178
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
GV PN ++ +G+ A + + ++ + + + + +V + R G V
Sbjct: 179 DGVRPNKISFMGISLAVP--SFRDAFVSARQVHKRMFDLGLDLVGYTALVKMYGRCGQVE 236
Query: 556 EAEDFINQMACDADIVVWKSLLAS 579
+AE + D+V W +++ S
Sbjct: 237 DAEVVFEGIPW-KDVVAWTAMVTS 259
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/469 (31%), Positives = 248/469 (52%), Gaps = 46/469 (9%)
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK-DVTSWGSMIAAFS 213
G+++H++++ + + ++ +LI MY+K +++ A ++FS + +V ++ ++I+ F
Sbjct: 56 GKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFI 115
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------- 251
G+ E + +M + G P++F F AC +
Sbjct: 116 TNGFPEEGFEFYQKMRNEGVI-PDKFTFPCAIKACLDVLEIKKIHGLLFKFGLELDVFIG 174
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A++ F E+ D+ WNA++ G A + F M D ++
Sbjct: 175 SALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVV 234
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P TV +L L G +H + +KMG+DS V V N+++ MY KC + +AL +
Sbjct: 235 PSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEI 294
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F E+ + D SWNSI++ Q + RL RML + I+PD +T V+ AC+ +A+
Sbjct: 295 F-EMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAA 353
Query: 417 LEMVTQLHCYITKTGLAFD------VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
L ++H Y+ +GL D V + N ++D+Y KCGS+ A +F M N DV SW
Sbjct: 354 LMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASW 413
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
+ +I+GY G G+EAL++F+RM + + P+ VT VGVL+ACSH G V +G + M++
Sbjct: 414 NIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKS 473
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+Y + PT EH +CV+D+L RAG + EA + M +A+ VVW++LLA+
Sbjct: 474 KYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAA 522
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/521 (24%), Positives = 230/521 (44%), Gaps = 71/521 (13%)
Query: 14 LYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSL------RSLQLGRKVHDHILLSKCQ 67
L ++ + ++FS +T I+ Y L + +SL ++L G+++H ++L++
Sbjct: 11 LIKKSPLFFNFSSISTAIQSFQQPY-NLTTCIASLQASAHHKNLSKGKEIHSYMLINGFL 69
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGF-DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
+ ++NMY KC + A F D + NV ++ A+I+G N + + Y +
Sbjct: 70 NSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQK 129
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M GV+P +FTF IKAC + + +++H + K + +AL+ Y KF
Sbjct: 130 MRNEGVIPDKFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGL 186
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+ A+ F + +DV W +M+ ++++G + E + ++ + P+ F V S
Sbjct: 187 MEHAQVAFEELPIRDVVLWNAMVNGYAQIG-QFEMVLETFRRMNDESVVPSRFTVTGVLS 245
Query: 247 ACS-----NFARI-----------------------------------LFNEIDSPDLAS 266
+ N RI +F + D+ S
Sbjct: 246 VFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFS 305
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WN++++ + + + L M + PD +TV ++L AC L G ++H Y+I
Sbjct: 306 WNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMI 365
Query: 327 KMGFDS------NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
G +V + NA++ MYAKC + +A LVF+ + N D SWN +I H
Sbjct: 366 VSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERM-SNKDVASWNIMIMGYGMHG 424
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM- 439
E +FSRM Q+KPD +TF V+ AC+ V+Q ++ + +DV
Sbjct: 425 YGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAG---FVSQGRNFLVQMKSKYDVAPTI 481
Query: 440 ---NGLMDIYIKCGSLGSARKLFNFME---NPDVVSWSSLI 474
++D+ + G L A +L M NP V W +L+
Sbjct: 482 EHYTCVIDMLGRAGQLDEAYELALTMPIEANP--VVWRALL 520
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 199/449 (44%), Gaps = 65/449 (14%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
++F Q N + P T+ I AC L L++ +K+H + + DV + + ++N
Sbjct: 123 GFEFYQKMRNEGVIPDKFTFPCAIKAC--LDVLEI-KKIHGLLFKFGLELDVFIGSALVN 179
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
Y K G +E A++ F+++P R+VV W AM+ G +Q Q ++ + +M V+P +FT
Sbjct: 180 CYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFT 239
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
++ + +G + GR +H +K + S + N+LI MY K I DA +F +
Sbjct: 240 VTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR 299
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------- 251
KD+ SW S+++ + G L + ML G QP+ +V ACS+
Sbjct: 300 EKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGI-QPDLVTVTTVLPACSHLAALMHGR 358
Query: 252 ---------------------------------------ARILFNEIDSPDLASWNALIA 272
A ++F + + D+ASWN +I
Sbjct: 359 EIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIM 418
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G H NEA+ +FS M + +L PD +T +L AC + QG +++++M
Sbjct: 419 GYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQG---RNFLVQMKSKY 475
Query: 333 NVPVC----NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
+V ++ M + L A + + A+ V W +++AAC H A +
Sbjct: 476 DVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHA--VLAE 533
Query: 389 FSRMLASQIKPDH----ITFNDVMGACAK 413
+ +++P+H + ++V GA +
Sbjct: 534 VAAQRVFELEPEHCGSYVLMSNVYGAVGR 562
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 148/283 (52%), Gaps = 18/283 (6%)
Query: 306 LCACIGRL-------TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
L CI L L +G ++HSY++ GF ++ +++ MY+KC+ + AL +F
Sbjct: 37 LTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFS 96
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ + ++N+II+ + + EE F + +M + PD TF + AC + ++
Sbjct: 97 DPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIK 156
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
++H + K GL DVF+ + L++ Y+K G + A+ F + DVV W++++ GYA
Sbjct: 157 ---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYA 213
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRI-MENEYGII 535
Q G + L+ F RM V P+ T+ GVL+ + +G + G +H + + M + G+
Sbjct: 214 QIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVA 273
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ + ++D+ + C+ +A + I +M + DI W S+++
Sbjct: 274 VS----NSLIDMYGKCKCIEDALE-IFEMMREKDIFSWNSIVS 311
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 183/620 (29%), Positives = 301/620 (48%), Gaps = 97/620 (15%)
Query: 47 SLRSLQLGR--KVHDHI--LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVV 102
+LR QLGR ++ + + L + ++V N +++ Y K G + +AR FD MPQRN+V
Sbjct: 19 NLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLV 78
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
SW +MIAG N DA +L+ +M + + +++ +I + +G + R+L ++
Sbjct: 79 SWNSMIAGYLHNELVEDAARLFDRMFKRDI----YSWTLMITCYTRIGELEKARELF-NL 133
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK-----LGY 217
+ + + + +NALIA Y K +A+ +F + K+V SW S+++ ++K LG
Sbjct: 134 LPDKQDT--VCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGL 191
Query: 218 EL-EALCHFN--------------------EMLHHGAYQPNEFIFGSVFSACSNFARI-- 254
+ EA+ N M PN + ++ S +++ R+
Sbjct: 192 QFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTE 251
Query: 255 ---LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE------LLPDGLTVHSL 305
LFNE+ + +L SWNA+I + ++A LF EM +++ ++ + V L
Sbjct: 252 ARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKL 311
Query: 306 LCAC-IGRLTLYQGMQVHSYIIKMGFDSNV---------------PVC-NAILTMYAKCS 348
L A I L Y+ + + +I S VC N+++T YA C
Sbjct: 312 LQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCG 371
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI----------- 397
AL +F+E+ D VSWN++IAA Q Q ++ +F+ M +
Sbjct: 372 RTDEALRLFQEM-VCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYV 430
Query: 398 --------------------KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
KPD T + A A +A+L + QLH KTG D+F
Sbjct: 431 QNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLF 490
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
V N ++ +Y K G + A +F ++ DVVSW+SLI GYA GCG EA++LF M G
Sbjct: 491 VKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRG 550
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
+ P+ VT G+L+AC+H G V++GL+L++ M Y I P EH +CV++LL R G + EA
Sbjct: 551 IIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEA 610
Query: 558 EDFINQMACDADIVVWKSLL 577
+ + M + +W +LL
Sbjct: 611 VEIVQGMKTVSSAKIWGALL 630
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 122/530 (23%), Positives = 210/530 (39%), Gaps = 128/530 (24%)
Query: 166 EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHF 225
E GS++ QN I+ + RI +A VF + +++ ++ SMI+A++K G A F
Sbjct: 10 EKGSYVFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELF 69
Query: 226 NEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASW------------------ 267
+ M N I G + + A LF+ + D+ SW
Sbjct: 70 DLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARE 129
Query: 268 --------------NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
NALIAG A EA LF EM L+ + ++ +S+L
Sbjct: 130 LFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEM----LVKNVVSWNSILSGYTKNG 185
Query: 314 TLYQGMQ----------------VHSYIIKMGFDS------NVPVCNAI-----LTMYAK 346
+ G+Q V Y+ DS +P N + L+ +A
Sbjct: 186 KMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAH 245
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
+ A +F E+ + VSWN++I A ++ NQ ++ ++LF M + D +++
Sbjct: 246 YGRMTEARNLFNEM-PTKNLVSWNAMIGAYVRENQIDDAYKLFMEM----PEKDSVSWTA 300
Query: 407 VMGACAKMASL-----------------------------------EMVTQL-------- 423
++ ++ L E+ +Q+
Sbjct: 301 MINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCW 360
Query: 424 --------HCYITKTGLAF-------DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
HC T L D+ N ++ Y + G + A ++FN M+ +VV
Sbjct: 361 NSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVV 420
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
SW+SLI GY Q G EAL F M+ G P+ T+V L A +++ + G+ L+ +
Sbjct: 421 SWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLT 480
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ G + ++ + A++G V EAE+ ++ D+V W SL+A
Sbjct: 481 I-KTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXK-DVVSWNSLIA 528
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 194/485 (40%), Gaps = 129/485 (26%)
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
P+VV +L+ + G + +AR F++MP +N+VSW AMI + Q +DA KL+++M
Sbjct: 231 PNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEM 290
Query: 128 LQ------SGVMPGQFTFGSIIKACSGLG------------------------------- 150
+ + ++ G G +++A L
Sbjct: 291 PEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFS 350
Query: 151 ------SVCLGRQL--HAHVIKSEHGSHL---------IAQNALIAMYTKFDRILDARNV 193
SVC + +AH +++ L ++ N +IA Y + ++ A +
Sbjct: 351 QISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEM 410
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE--------------- 238
F+ + ++V SW S+I + + G EAL F M G +P++
Sbjct: 411 FNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGE-KPDQTTIVCCLRASANLAA 469
Query: 239 --------------------FIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAG 273
F+ ++ + + R+ +F EI D+ SWN+LIAG
Sbjct: 470 LNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAG 529
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC------IGRLTLYQGMQVHSYIIK 327
A + EA+ LF M R ++PD +T LL AC L L++ M +Y IK
Sbjct: 530 YALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSM-TETYSIK 588
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC-LQHN------ 380
S C ++ + + L A+ + + + + + W +++ AC + HN
Sbjct: 589 P--QSEHYAC--VINLLGRVGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKY 644
Query: 381 QAEEL----------FRLFSRMLASQIKPDHITFNDVMGACAKMAS------LEMVTQLH 424
AE L + L S M A + D + V+ K +E+ QLH
Sbjct: 645 SAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEKQPGCSWIEIDNQLH 704
Query: 425 CYITK 429
C+++K
Sbjct: 705 CFLSK 709
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + LY EAL + + + +T + A ++L +L +G ++H +
Sbjct: 423 NSLITGYVQNGLYFEALNCFILMKQQGE-KPDQTTIVCCLRASANLAALNVGVQLHHLTI 481
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D+ ++N IL MY K G + +A F ++ ++VVSW ++IAG + N +A++
Sbjct: 482 KTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVE 541
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL-----HAHVIK--SEHGSHLIAQN 175
L+ M G++P + TF ++ AC+ G V G L + IK SEH +
Sbjct: 542 LFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYA------ 595
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTS---WGSMIAA 211
+I + + R+ +A + G+ K V+S WG+++ A
Sbjct: 596 CVINLLGRVGRLEEAVEIVQGM--KTVSSAKIWGALLWA 632
>gi|225436291|ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 906
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 160/565 (28%), Positives = 287/565 (50%), Gaps = 22/565 (3%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I P +A ++ AC++L G + H +I+ + L+N +++ Y KCG LE R
Sbjct: 159 IEPDAFAFSMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMR 218
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F M ++N+VSW I G N+ +A++++ +++ F+ SI+KA SGLG
Sbjct: 219 RVFSHMSEKNLVSWNTFINGYVHNFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLG 278
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMY-------TKFDRI---LDARNVFSGIARK 200
+ G+++H +++++ ++ ++L+ MY + + R+ L N G
Sbjct: 279 HLDHGKEIHGYILRAGIETNRYVVSSLLDMYIGCIDHESLYPRVEVPLKLLNYLEGGGYD 338
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV---FSACSNF--ARIL 255
+ + + + L LE+ F+ ++ + + ++ S+ +S C + A+ +
Sbjct: 339 EFIM--TSLLKWCSLESSLESGKMFHSLIIKLDLKSDSYVLSSLIDMYSKCGIWEAAKRV 396
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
F ++ PD A W+ALI+G + + EA+ LF +M+ + + T S++ AC+ L
Sbjct: 397 FTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVILACLALENL 456
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
+G ++H I++ G++SN V N ++ +Y++ AL + + + +SWN +I A
Sbjct: 457 RKGKELHCKILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIPDS--EISWNFLIRA 514
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
CL E + +L R+ S D ++ D+ +C+ L + TQ H Y+TK GL
Sbjct: 515 CLGAEDYEIIHKLLWRIQVSHGNLDPVSACDIFASCSSPVLLNVGTQAHAYMTKRGLISH 574
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
+ N L+ +Y CG A + FN M D SW+S++ + G EAL L ++MR
Sbjct: 575 PTISNSLIQMYSACGKFDEAVQAFNLMPEKDTCSWTSILSARVEHGHPSEALNLISQMRW 634
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
+ T VL AC+ +GLV+E L+ M+ YGI P EH SC+V++L RAG
Sbjct: 635 KNKPADQSTFRSVLNACAQMGLVDEAFRLFFSMKEVYGIEPLEEHYSCMVEVLGRAGMFE 694
Query: 556 EAEDFINQMAC-DADIVVWKSLLAS 579
E DFIN + ++W++LL+S
Sbjct: 695 EVLDFINGVPTFKLGPLIWRTLLSS 719
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 234/499 (46%), Gaps = 73/499 (14%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSG---VMP 134
MY G++++AR FD+MP+R++VSWT +++G +++ ++ + ++ ML SG + P
Sbjct: 1 MYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLLRP 60
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
F F +++AC + + GR +H V+K +NAL++MY + DA VF
Sbjct: 61 DSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVF 120
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA-- 252
GI + D+ W S+++ + K G E E L F +M+ G +P+ F F V AC+N
Sbjct: 121 GGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMV-SGGIEPDAFAFSMVLGACTNLECW 179
Query: 253 --------------------------------------RILFNEIDSPDLASWNALIAGV 274
R +F+ + +L SWN I G
Sbjct: 180 DFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGY 239
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+ + EA+ +F + + D ++ S+L A G L G ++H YI++ G ++N
Sbjct: 240 VHNFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNR 299
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V +++L MY C + S+ + + E +L + +
Sbjct: 300 YVVSSLLDMYIGC-------------------IDHESL------YPRVEVPLKLLNYLEG 334
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
D ++ C+ +SLE H I K L D +V++ L+D+Y KCG +
Sbjct: 335 GGY--DEFIMTSLLKWCSLESSLESGKMFHSLIIKLDLKSDSYVLSSLIDMYSKCGIWEA 392
Query: 455 ARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH 514
A+++F +E PD WS+LI G++ GC EALKLF +M+ G+ N T V+ AC
Sbjct: 393 AKRVFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVILACLA 452
Query: 515 VGLVEEGLHLY-RIMENEY 532
+ + +G L+ +I+ + Y
Sbjct: 453 LENLRKGKELHCKILRSGY 471
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 148/570 (25%), Positives = 269/570 (47%), Gaps = 35/570 (6%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP ++ A ++ AC + L GR VH ++ D ++N +++MYG CG+LEDA
Sbjct: 58 LRPDSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAA 117
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ F + + ++V W+++++G +N E + ++++ M+ G+ P F F ++ AC+ L
Sbjct: 118 VVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLE 177
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
G Q H ++IK S L +N+L+ Y K + R VFS ++ K++ SW + I
Sbjct: 178 CWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFIN 237
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNAL 270
+ + LEAL F ++L Q ++F S+ A S +D L
Sbjct: 238 GYVHNFHYLEALRIF-QILMEEVSQCDDFSLLSILKAVSGLGH-----LDHGKEIHGYIL 291
Query: 271 IAGVASHSN-ANEAMSLFSEMRDRE-LLP-----------------DGLTVHSLLCACIG 311
AG+ ++ + + ++ D E L P D + SLL C
Sbjct: 292 RAGIETNRYVVSSLLDMYIGCIDHESLYPRVEVPLKLLNYLEGGGYDEFIMTSLLKWCSL 351
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+L G HS IIK+ S+ V ++++ MY+KC + A VF + + D+ W++
Sbjct: 352 ESSLESGKMFHSLIIKLDLKSDSYVLSSLIDMYSKCGIWEAAKRVFTRV-EQPDTAPWSA 410
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+I+ + E +LF +M IK + TF V+ AC + +L +LHC I ++G
Sbjct: 411 LISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVILACLALENLRKGKELHCKILRSG 470
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL--KL 489
+ V+N L+++Y + A KL + + + + +SW+ LI A G D + KL
Sbjct: 471 YESNFSVVNTLINLYSELWQHKQALKLCSMIPDSE-ISWNFLI--RACLGAEDYEIIHKL 527
Query: 490 FTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLA 549
R++ + + V+ + +CS L+ G + M + G+I + ++ + +
Sbjct: 528 LWRIQVSHGNLDPVSACDIFASCSSPVLLNVGTQAHAYM-TKRGLISHPTISNSLIQMYS 586
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G EA N M + D W S+L++
Sbjct: 587 ACGKFDEAVQAFNLMP-EKDTCSWTSILSA 615
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 162/313 (51%), Gaps = 13/313 (4%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM----RDRELLPDGLTVHSLLC 307
AR LF+E+ L SW +++G A H A+E + +F +M L PD +L
Sbjct: 11 ARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLLRPDSFVFAVVLR 70
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
AC L G VH ++K + V NA+++MY C L +A +VF + K D V
Sbjct: 71 ACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVFGGIDK-PDLV 129
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
W+SI++ +++ EE R+F M++ I+PD F+ V+GAC + + TQ HCYI
Sbjct: 130 GWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLECWDFGTQAHCYI 189
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K G +++ N LMD Y KCG L R++F+ M ++VSW++ I GY EAL
Sbjct: 190 IKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVHNFHYLEAL 249
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVV 545
++F + + +L+ +L A S +G ++ G +H Y + GI R S ++
Sbjct: 250 RIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYIL---RAGIETNRYVVSSLL 306
Query: 546 DLLARAGCV-HEA 557
D+ GC+ HE+
Sbjct: 307 DMY--IGCIDHES 317
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 116/242 (47%), Gaps = 7/242 (2%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
+ EAL + Q + I+ T+ +I AC +L +L+ G+++H IL S + + + N
Sbjct: 421 FAEALKLFRKMQFD-GIKANEFTFTSVILACLALENLRKGKELHCKILRSGYESNFSVVN 479
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGC--SQNYQENDAIKLYIQMLQSGV 132
++N+Y + + A +P +SW +I C +++Y+ + IQ+ +
Sbjct: 480 TLINLYSELWQHKQALKLCSMIPDSE-ISWNFLIRACLGAEDYEIIHKLLWRIQVSHGNL 538
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
P + I +CS + +G Q HA++ K SH N+LI MY+ + +A
Sbjct: 539 DP--VSACDIFASCSSPVLLNVGTQAHAYMTKRGLISHPTISNSLIQMYSACGKFDEAVQ 596
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA 252
F+ + KD SW S+++A + G+ EAL ++M ++ F SV +AC+
Sbjct: 597 AFNLMPEKDTCSWTSILSARVEHGHPSEALNLISQMRWKNK-PADQSTFRSVLNACAQMG 655
Query: 253 RI 254
+
Sbjct: 656 LV 657
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM--RSLG--VSP 500
+Y+ G++ ARKLF+ M +VSW+ ++ GYA+ G E L +F M S G + P
Sbjct: 1 MYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLLRP 60
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ VL AC V + G ++ ++ + ++ + + +V + G + +A
Sbjct: 61 DSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVE-NALVSMYGSCGALEDAAVV 119
Query: 561 INQMACDADIVVWKSLLA 578
+ D+V W S+L+
Sbjct: 120 FGGID-KPDLVGWSSILS 136
>gi|224087027|ref|XP_002308034.1| predicted protein [Populus trichocarpa]
gi|222854010|gb|EEE91557.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/473 (31%), Positives = 251/473 (53%), Gaps = 39/473 (8%)
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
I++ACS +G V LG Q+H VIKS ++ +LI+MY++ +A VF+G+ KD
Sbjct: 16 ILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEAEKVFNGVGCKD 75
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------ 249
+ MI + K GYE A+ F ++ G PN++ F ++ S C+
Sbjct: 76 LRCLNCMILEYGKAGYEKRAIGVFIYLISVG-LDPNDYTFTNIISTCNVEEGKQLHGLAV 134
Query: 250 ------------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
A +F+ ++ +L SW ALI+G + +A+
Sbjct: 135 KYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTALISGYTRNGYGEKAVD 194
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
F E+R + D + ++L C L G Q+H +IK+G+ ++ + A++ +YA
Sbjct: 195 GFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLGYPCDINIGTALIDLYA 254
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF-SRMLASQIKPDHITF 404
KC +A VF L + + S+N+I+ ++++ EE +F S++ + IKPD ++F
Sbjct: 255 KCKNFQSARTVFNGLSPRS-TASFNAILVGFIENDSNEEDPMVFLSQLRLAGIKPDSVSF 313
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
+ ++ A ASL LH Y KTG A + V N L+ +Y KCG + A + FN M
Sbjct: 314 SRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAKCGIVEDAYQAFNSMSA 373
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
D +SW+++I Y+ G G++AL L+ M G +P+ +T++ +L AC++ GL E+GLHL
Sbjct: 374 NDCISWNAIISAYSLHGQGEKALLLYQEMEEKGFTPDEITILVILQACTYSGLSEDGLHL 433
Query: 525 YRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ ME++YGI P EH +C+VDLL RAG + +A D IN+ ++W++L+
Sbjct: 434 FNTMESKYGIQPLLEHYACMVDLLGRAGYLSQAMDIINRSPFSESTLLWRTLV 486
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 201/412 (48%), Gaps = 45/412 (10%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++ ACS + + LG ++H ++ S + +V + +++MY + G+ ++A F+ + ++
Sbjct: 16 ILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEAEKVFNGVGCKD 75
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+ MI + E AI ++I ++ G+ P +TF +II C+ V G+QLH
Sbjct: 76 LRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIISTCN----VEEGKQLHG 131
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
+K NA+I MY K + +A +FS + +K++ SW ++I+ +++ GY +
Sbjct: 132 LAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTALISGYTRNGYGEK 191
Query: 221 ALCHFNEMLHHGAY---------------------------------QPNEFIFGS---- 243
A+ F E+ G P + G+
Sbjct: 192 AVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLGYPCDINIGTALID 251
Query: 244 VFSACSNF--ARILFNEIDSPDLASWNALIAG-VASHSNANEAMSLFSEMRDRELLPDGL 300
+++ C NF AR +FN + AS+NA++ G + + SN + M S++R + PD +
Sbjct: 252 LYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVFLSQLRLAGIKPDSV 311
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
+ LL R +L +G +H+Y IK GF ++ V NA++TMYAKC ++ +A F +
Sbjct: 312 SFSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAKCGIVEDAYQAFNSM 371
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
N D +SWN+II+A H Q E+ L+ M PD IT ++ AC
Sbjct: 372 SAN-DCISWNAIISAYSLHGQGEKALLLYQEMEEKGFTPDEITILVILQACT 422
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 139/313 (44%), Gaps = 44/313 (14%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +IS C+ ++ G+++H + + N ++ MYGK G +E+A F M
Sbjct: 113 TFTNIISTCN----VEEGKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVM 168
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++N++SWTA+I+G ++N A+ ++++ GV +I+ CS ++ LG
Sbjct: 169 NKKNLISWTALISGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGT 228
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H VIK + + ALI +Y K AR VF+G++ + S+ +++ F +
Sbjct: 229 QIHGLVIKLGYPCDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIEND 288
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL--------------------- 255
E F L +P+ F + S +N A ++
Sbjct: 289 SNEEDPMVFLSQLRLAGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVS 348
Query: 256 -------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
FN + + D SWNA+I+ + H +A+ L+ EM ++
Sbjct: 349 NALITMYAKCGIVEDAYQAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQEMEEKGFT 408
Query: 297 PDGLTVHSLLCAC 309
PD +T+ +L AC
Sbjct: 409 PDEITILVILQAC 421
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 115/239 (48%), Gaps = 2/239 (0%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
+N Y E V + A ++ CS ++L LG ++H ++ D+
Sbjct: 185 RNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLGYPCDIN 244
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN-YQENDAIKLYIQMLQS 130
+ ++++Y KC + + AR F+ + R+ S+ A++ G +N E D + Q+ +
Sbjct: 245 IGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVFLSQLRLA 304
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G+ P +F ++ + S+ GR LHA+ IK+ H+ NALI MY K + DA
Sbjct: 305 GIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAKCGIVEDA 364
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
F+ ++ D SW ++I+A+S G +AL + EM G + P+E + AC+
Sbjct: 365 YQAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQEMEEKG-FTPDEITILVILQACT 422
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 90/172 (52%), Gaps = 6/172 (3%)
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
++ AC+ + + + Q+H ++ K+G +VFV L+ +Y + G+ A K+FN + D
Sbjct: 16 ILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEAEKVFNGVGCKD 75
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
+ + +IL Y + G A+ +F + S+G+ PN T +++ C+ VEEG L+
Sbjct: 76 LRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIISTCN----VEEGKQLHG 131
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +YG++ + V+ + + G V EA + M +++ W +L++
Sbjct: 132 LAV-KYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMN-KKNLISWTALIS 181
>gi|357112521|ref|XP_003558057.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 656
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 153/480 (31%), Positives = 243/480 (50%), Gaps = 37/480 (7%)
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P +T + AC+ V GRQ+HAH + G +L +NALI MY+ + DAR V
Sbjct: 101 PDSYTHPILAAACASRKDVIEGRQVHAHAVSHGFGDNLYLRNALIFMYSACGCLWDARRV 160
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI--FGSVFSACSNF 251
F D SW +++AA+ G +A+ F +M A + + FG +
Sbjct: 161 FDAGPVWDAVSWNTILAAYVHAGDVDQAVEVFAQMPKRNATAVSSMVSLFGR--RGMVDE 218
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR +F+ + D+ +W A+I+ + EA+ +FS MR D + S++ AC
Sbjct: 219 ARRVFDAAECRDIFTWTAMISCFERNDMFAEALHVFSCMRRERWHVDEPLMVSVVSACAQ 278
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC-----------SVLC--------- 351
+ G H +I+ G S V V NA++ MY+ C S C
Sbjct: 279 SEVIQNGQMCHGLVIRAGLCSQVNVQNALIHMYSSCLDVFAARRLFDSGECLDQYSWNSM 338
Query: 352 -----------NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+A+ +F + N D+VSW+++I+ C+Q+NQ+ + +F M A I+PD
Sbjct: 339 IAGYLKNGHVKDAMALFSAM-PNKDNVSWSTVISGCVQNNQSSDALTVFDNMQAQGIRPD 397
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
+T V+ AC +++LE +H YI + + + L+++Y+KCG L +A + FN
Sbjct: 398 EVTIVSVISACTNLSALEKGKSVHEYIKQNQYYVSLVLGTSLINMYMKCGCLEAALEAFN 457
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR-SLGVSPNLVTLVGVLTACSHVGLVE 519
ME W+++I+G A G ++L +F+ M S +PN +T GVL+AC H GLV+
Sbjct: 458 IMEEKGTPCWNAVIVGLAMNGLVMKSLDMFSEMEASDTATPNEITFTGVLSACRHAGLVD 517
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EG H +++M++ Y I+P H C+VDLL RAG V EAED I M D+ W +LL +
Sbjct: 518 EGRHFFKLMQHRYQIVPNIRHYGCMVDLLGRAGYVKEAEDMIQSMPMSPDVPAWGALLGA 577
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 111/512 (21%), Positives = 205/512 (40%), Gaps = 115/512 (22%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L +AC+S + + GR+VH H + ++ L+N ++ MY CG L DAR FD
Sbjct: 105 THPILAAACASRKDVIEGRQVHAHAVSHGFGDNLYLRNALIFMYSACGCLWDARRVFDAG 164
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P + VSW ++A + A++++ QM +
Sbjct: 165 PVWDAVSWNTILAAYVHAGDVDQAVEVFAQMPKRNA------------------------ 200
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
A +++++++ + + +AR VF +D+ +W +MI+ F +
Sbjct: 201 ---------------TAVSSMVSLFGRRGMVDEARRVFDAAECRDIFTWTAMISCFERND 245
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-------------------------- 250
EAL H + + +E + SV SAC+
Sbjct: 246 MFAEAL-HVFSCMRRERWHVDEPLMVSVVSACAQSEVIQNGQMCHGLVIRAGLCSQVNVQ 304
Query: 251 --------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE-- 294
AR LF+ + D SWN++IAG + + +AM+LFS M +++
Sbjct: 305 NALIHMYSSCLDVFAARRLFDSGECLDQYSWNSMIAGYLKNGHVKDAMALFSAMPNKDNV 364
Query: 295 -----------------------------LLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
+ PD +T+ S++ AC L +G VH YI
Sbjct: 365 SWSTVISGCVQNNQSSDALTVFDNMQAQGIRPDEVTIVSVISACTNLSALEKGKSVHEYI 424
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
+ + ++ + +++ MY KC L AL F + + + WN++I + +
Sbjct: 425 KQNQYYVSLVLGTSLINMYMKCGCLEAALEAFNIMEEKG-TPCWNAVIVGLAMNGLVMKS 483
Query: 386 FRLFSRMLASQI-KPDHITFNDVMGACAKMASLEMVTQLHCYIT-KTGLAFDVFVMNGLM 443
+FS M AS P+ ITF V+ AC ++ + + + ++ ++
Sbjct: 484 LDMFSEMEASDTATPNEITFTGVLSACRHAGLVDEGRHFFKLMQHRYQIVPNIRHYGCMV 543
Query: 444 DIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
D+ + G + A + M +PDV +W +L+
Sbjct: 544 DLLGRAGYVKEAEDMIQSMPMSPDVPAWGALL 575
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 108/222 (48%), Gaps = 13/222 (5%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + N ++AL +D Q IR T +ISAC++L +L+ G+ VH++I ++
Sbjct: 370 ISGCVQNNQSSDALTVFDNMQAQ-GIRPDEVTIVSVISACTNLSALEKGKSVHEYIKQNQ 428
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+VL ++NMY KCG LE A F+ M ++ W A+I G + N ++ ++
Sbjct: 429 YYVSLVLGTSLINMYMKCGCLEAALEAFNIMEEKGTPCWNAVIVGLAMNGLVMKSLDMFS 488
Query: 126 QMLQSGV-MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN-----ALIA 179
+M S P + TF ++ AC G V GR H K + I N ++
Sbjct: 489 EMEASDTATPNEITFTGVLSACRHAGLVDEGR----HFFKLMQHRYQIVPNIRHYGCMVD 544
Query: 180 MYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLG-YEL 219
+ + + +A ++ + DV +WG+++ A K G YE+
Sbjct: 545 LLGRAGYVKEAEDMIQSMPMSPDVPAWGALLGACWKHGEYEV 586
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 190/632 (30%), Positives = 312/632 (49%), Gaps = 61/632 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYD-FSQNNTNIR---IRPS--TYAGLISACSSL--RSLQLG 54
N +S C++ +A+ A+D FS + ++P+ T+ LISA SL L L
Sbjct: 247 NSMISVYCQRG---DAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLL 303
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
++ + S D+ + + +++ + K GS+ A+ F KM RNVVS +I G +
Sbjct: 304 EQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQ 363
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR----QLHAHVIKSEHGSH 170
+ +A++L+++M S V ++ I+ A + G+ ++HA +I+S +
Sbjct: 364 KRGEEAVELFMEMKDS-VELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNA 422
Query: 171 LIA-QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
IA N LI MY K I DA VF + KD +W SMI + LEA+ F EM
Sbjct: 423 QIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMR 482
Query: 230 HHGAYQPNEFIFGSVFSACSNFARI----------------------------------- 254
Y P+ F S S+C++ I
Sbjct: 483 RTELY-PSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYV 541
Query: 255 -----LFNEIDSPDLASWNALIAGVA-SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCA 308
F+ + D SWN+LI +A S + EA+ F M P+ +T ++L A
Sbjct: 542 KECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAA 601
Query: 309 CIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
+ L+L++ G Q+H+ ++K ++ + NA+L Y KC + +F + D V
Sbjct: 602 -VSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEV 660
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
SWNS+I+ + + + + M+ + D TF V+ ACA +A+LE ++H
Sbjct: 661 SWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCS 720
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
+ L D+ + + L+D+Y KCG + A + F M ++ SW+S+I GYA+ G G ++L
Sbjct: 721 VRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSL 780
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
LF +M+ G P+ VT VGVL+ACSH GLV EG + M YG+ P EH SC+VDL
Sbjct: 781 DLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDL 840
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
L R G +++ EDF+NQM ++++W+++L +
Sbjct: 841 LGRVGELNKMEDFLNQMPVKPNVLIWRTVLGA 872
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 168/565 (29%), Positives = 281/565 (49%), Gaps = 59/565 (10%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D+ L N ++N+Y + G L R FD+MP RN+VSW+ +I+G ++N N+A +L+ +M+
Sbjct: 107 DLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMV 166
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCL--GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
G MP + FGS+I+AC G L G Q+H + K+++ + + A N LI+MY
Sbjct: 167 SDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALG 226
Query: 187 ILD-ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH---GAYQPNEFIFG 242
++D AR F I +++ S SMI+ + + G + A F+ M +PNE+ FG
Sbjct: 227 MVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFG 286
Query: 243 SVFSA-CS-----------------------------------------NFARILFNEID 260
S+ SA CS +A+ +F ++
Sbjct: 287 SLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMS 346
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDR-ELLPDGLTVHSLLCACIGRLTL---- 315
++ S N LI G+ EA+ LF EM+D EL P+ + +L A L
Sbjct: 347 YRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMI--ILTAFPEFHVLENGK 404
Query: 316 YQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
+G +VH+++I+ G ++ + + N ++ MYAKC + +A +VF+ L N DSV+WNS+I
Sbjct: 405 RKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFR-LMDNKDSVTWNSMIT 463
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
Q+ Q E + F M +++ P + T + +CA + + + QLHC K GL
Sbjct: 464 GLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDL 523
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD-EALKLFTRM 493
DV V N L+ +Y +CG + +K F+ M + D VSW+SLI A EA++ F M
Sbjct: 524 DVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVM 583
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
G PN VT + +L A S + L E G ++ ++ + + ++ + G
Sbjct: 584 MRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKR-NVAADTAIENALLACYGKCGD 642
Query: 554 VHEAEDFINQMACDADIVVWKSLLA 578
+ E+ ++M+ D V W S+++
Sbjct: 643 MGYCENIFSRMSDRQDEVSWNSMIS 667
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 166/605 (27%), Positives = 273/605 (45%), Gaps = 69/605 (11%)
Query: 35 PSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQ--PDVVLQNHILNMYGKC-GSLEDA 89
P+ YA +I AC L + H L+SK Q DV N +++MYG G ++ A
Sbjct: 172 PNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYA 231
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM----LQSGVMPGQFTFGSIIKA 145
R FD + RN+VS +MI+ Q A ++ M + G+ P ++TFGS+I A
Sbjct: 232 RRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISA 291
Query: 146 CSGLGS--VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
L + + L QL V KS L +AL++ + K I A+N+F ++ ++V
Sbjct: 292 TCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVV 351
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF-----------------GS--- 243
S +I + EA+ F EM PN ++ GS
Sbjct: 352 SLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVH 411
Query: 244 ---------------------VFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNA 280
+++ C N A ++F +D+ D +WN++I G+ +
Sbjct: 412 AFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQF 471
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
EA+ F EMR EL P T+ S L +C + G Q+H +K+G D +V V NA+
Sbjct: 472 LEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNAL 531
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE-ELFRLFSRMLASQIKP 399
L +Y +C + F L + D VSWNS+I A + E F M+ + P
Sbjct: 532 LALYGECGYVKECQKAF-SLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDP 590
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
+ +TF ++ A + ++ E+ Q+H + K +A D + N L+ Y KCG +G +F
Sbjct: 591 NRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIF 650
Query: 460 NFM-ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
+ M + D VSW+S+I GY +A+ + M G + T VL+AC+ V +
Sbjct: 651 SRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATL 710
Query: 519 EEGLHLY-----RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
E G+ ++ +E++ I S +VD+ A+ G + A F M ++ W
Sbjct: 711 ERGMEVHGCSVRACLESDIVI------GSALVDMYAKCGRIDYASRFFEMMPA-RNLYSW 763
Query: 574 KSLLA 578
S+++
Sbjct: 764 NSMIS 768
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 221/480 (46%), Gaps = 63/480 (13%)
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+LH + K+ + L N LI +Y + + R VF + +++ SW +I+ +++
Sbjct: 93 EELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRN 152
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------------- 249
EA F +M+ G + PN + FGSV AC
Sbjct: 153 RMPNEACELFRKMVSDG-FMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDV 211
Query: 250 -----------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
++AR F+ I +L S N++I+ +A A +FS M+
Sbjct: 212 TASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQ- 270
Query: 293 RELLPDGL-----TVHSLLCAC--IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
+E++ DGL T SL+ A + L Q+ + + K GF ++ V +A+++ +A
Sbjct: 271 KEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFA 330
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS-QIKPDHITF 404
K + A +F+++ + VS N +I ++ + EE LF M S ++ P+ ++
Sbjct: 331 KAGSIGYAKNIFQKMSYR-NVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPN--SY 387
Query: 405 NDVMGACAKMASLE----MVTQLHCYITKTGLA-FDVFVMNGLMDIYIKCGSLGSARKLF 459
++ A + LE +++H ++ ++GL + + NGL+++Y KCG++ A +F
Sbjct: 388 MIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVF 447
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
M+N D V+W+S+I G Q EA+K F MR + P+ T++ L++C+ +G +
Sbjct: 448 RLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWIS 507
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G L+ + G+ + ++ L G V E + + M D D V W SL+ +
Sbjct: 508 VGEQLH-CEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLM-LDYDHVSWNSLIGA 565
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 156/489 (31%), Positives = 254/489 (51%), Gaps = 49/489 (10%)
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA--QNALIAMYTKFDRILDARNV 193
Q GS++++ LGR +HAH+I++ H + L + N L+ MY+K D + A++V
Sbjct: 6 QNLLGSLLESAVSTHCSILGRTIHAHIIRT-HVTPLPSFLSNHLVNMYSKLDLLNSAQHV 64
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR 253
S + V +W S+I+ L AL HF M QPN+F F VF A S F +
Sbjct: 65 LSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNV-QPNDFTFPCVFKA-SAFVQ 122
Query: 254 I-----------------------------------------LFNEIDSPDLASWNALIA 272
I +F+E+ +LA+WNA I+
Sbjct: 123 IPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYIS 182
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
+ +A+ F E P+ +T + L AC+ + L G Q+H++I++ G+
Sbjct: 183 NAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKE 242
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
+V V N ++ Y KC + +A +VF +G + VSW S++AA +Q+++ E +F +
Sbjct: 243 DVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQA 302
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
+++P + V+ ACA++ LE+ +H K + ++FV + L+D+Y KCGS+
Sbjct: 303 -RKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSI 361
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR--SLGVSPNLVTLVGVLT 510
+A ++F+ + ++V+W+++I GYA G D AL+LF M S G+ P+ VTL+ +L+
Sbjct: 362 ENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILS 421
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
CS VG VE G+ ++ M YGI P EH +CVVDLL R+G V A +FI MA I
Sbjct: 422 VCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTI 481
Query: 571 VVWKSLLAS 579
VW +LL +
Sbjct: 482 SVWGALLGA 490
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 196/439 (44%), Gaps = 50/439 (11%)
Query: 31 IRIRPSTYAG-LISACSSLRSLQLGRKVHDHILLSKCQP-DVVLQNHILNMYGKCGSLED 88
+ I P G L+ + S LGR +H HI+ + P L NH++NMY K L
Sbjct: 1 MNIHPQNLLGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNS 60
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A+ R VV+WT++I+GC N + A+ + M + V P FTF + KA +
Sbjct: 61 AQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAF 120
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+ G+Q+H +K + + MY K DA N+F + ++++ +W +
Sbjct: 121 VQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAY 180
Query: 209 IAAFSKLGYELEALCHFNEML-HHGAYQPNEFIFGSVFSACSNFARI------------- 254
I+ + L+A+ F E L HG +PN F + +AC + R+
Sbjct: 181 ISNAVQDRRSLDAIVAFKEFLCVHG--EPNSITFCAFLNACVDMVRLNLGRQLHAFIVRC 238
Query: 255 ---------------------------LFNEI-DSPDLASWNALIAGVASHSNANEAMSL 286
+FN I + ++ SW +++A + + A +
Sbjct: 239 GYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMV 298
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
F + R +E+ P + S+L AC L G VH+ +K + N+ V +A++ MY K
Sbjct: 299 FLQAR-KEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGK 357
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM-LASQ-IKPDHITF 404
C + NA VF EL + + V+WN++I + RLF M L S I+P ++T
Sbjct: 358 CGSIENAEQVFSELPER-NLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTL 416
Query: 405 NDVMGACAKMASLEMVTQL 423
++ C+++ ++E Q+
Sbjct: 417 ISILSVCSRVGAVERGIQI 435
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 180/416 (43%), Gaps = 58/416 (13%)
Query: 29 TNIR---IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
TN+R ++P+ T+ + A + ++ G+++H L DV + +MY K
Sbjct: 97 TNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKT 156
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G DA FD+MPQRN+ +W A I+ Q+ + DAI + + L P TF + +
Sbjct: 157 GFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFL 216
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDV 202
AC + + LGRQLHA +++ + + N LI Y K I+ A VF+ I RK+V
Sbjct: 217 NACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNV 276
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------- 251
SW SM+AA + E A F + +P +F+ SV SAC+
Sbjct: 277 VSWCSMLAALVQNHEEERACMVF--LQARKEVEPTDFMISSVLSACAELGGLELGRSVHA 334
Query: 252 -----------------------------ARILFNEIDSPDLASWNALIAGVASHSNANE 282
A +F+E+ +L +WNA+I G A + +
Sbjct: 335 LAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDM 394
Query: 283 AMSLFSEMR--DRELLPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNA 339
A+ LF EM + P +T+ S+L C + +G+Q+ S + G +
Sbjct: 395 ALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFAC 454
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRL 388
++ + + ++ A + + W +++ AC H + AE+LF L
Sbjct: 455 VVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFEL 510
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 136/256 (53%), Gaps = 8/256 (3%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N Y+S+ + +A+VA+ + + P+ T+ ++AC + L LGR++H
Sbjct: 178 NAYISNAVQDRRSLDAIVAF---KEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAF 234
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-NVVSWTAMIAGCSQNYQEND 119
I+ + DV + N +++ YGKCG + A M F+++ R NVVSW +M+A QN++E
Sbjct: 235 IVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEER 294
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
A +++Q + V P F S++ AC+ LG + LGR +HA +K+ ++ +AL+
Sbjct: 295 ACMVFLQARKE-VEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVD 353
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM-LHHGAYQPNE 238
MY K I +A VFS + +++ +W +MI ++ G AL F EM L +P+
Sbjct: 354 MYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSY 413
Query: 239 FIFGSVFSACSNFARI 254
S+ S CS +
Sbjct: 414 VTLISILSVCSRVGAV 429
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 165/569 (28%), Positives = 273/569 (47%), Gaps = 48/569 (8%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+ A + RS + D + K +V+ +N + + + G + DA F MP+R+
Sbjct: 79 LRAAARQRSHRRPPAPADACITGKPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRST 138
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL--- 158
++ M+AG Y N + + +S P F++ +++ A S+ R L
Sbjct: 139 STYNTMLAG----YAANGRLPQALSFFRSIPRPDSFSYNTLLHALGVSSSLADVRALFDE 194
Query: 159 -------HAHVIKSEHGSH-----------------LIAQNALIAMYTKFDRILDARNVF 194
+V+ S H +H ++ N ++A Y + RI +AR +F
Sbjct: 195 MPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELF 254
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
D SW +++A + + EA FN+M N + G AR
Sbjct: 255 DSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARR 314
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
LF+ D+ +W A+++G A + EA +F M D+ + ++ ++++ A + R
Sbjct: 315 LFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDK----NAVSWNAMMAAYVQRRM 370
Query: 315 LYQGMQVHSYIIKMGFDS----NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
+ + ++ FD+ NV N +LT YA+ +L A +F + + D+VSW
Sbjct: 371 MEEAKEL--------FDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQK-DAVSWA 421
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
+++AA Q +EE +LF M + F V+ CA +A+LE QLH + K
Sbjct: 422 AMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKA 481
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
G FV N L+ +Y KCGS+ A F ME DVVSW+++I GYA+ G G EAL++F
Sbjct: 482 GYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVF 541
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
MR P+ +TLVGVL ACSH GLVE+G+ + M ++G+ EH +C++DLL R
Sbjct: 542 DTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGR 601
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
AG + EA + + M + D +W +LL +
Sbjct: 602 AGRLDEAVNLMKDMPFEPDSTMWGALLGA 630
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 190/448 (42%), Gaps = 76/448 (16%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VS + + EA +D + + ++ +++A R ++ +++ D +
Sbjct: 331 VSGYAQNGMLEEAKRVFDAMPDKNAV-----SWNAMMAAYVQRRMMEEAKELFDAM---P 382
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
C+ +V N +L Y + G L++AR F MPQ++ VSW AM+A SQ + ++L+
Sbjct: 383 CR-NVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFK 441
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + G + F ++ C+ + ++ G QLH+ +IK+ +G NAL+AMY K
Sbjct: 442 EMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCG 501
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ +A + F + +DV SW +MIA +++ G+ EAL F+ M + +P++ V
Sbjct: 502 SMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTM-RKTSTKPDDITLVGVL 560
Query: 246 SACS-----------------NFARILFNE-----ID--------------------SPD 263
+ACS +F E ID PD
Sbjct: 561 AACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPD 620
Query: 264 LASWNALIAGVASHSNA----NEAMSLFSEMRDRELLPDGLTVHSLLC---ACIGRLTLY 316
W AL+ H N+ N A +F EL P+ ++ LL A G+
Sbjct: 621 STMWGALLGASRIHRNSELGRNAAEKIF------ELEPENAGMYVLLSNIYASSGKWRDV 674
Query: 317 QGMQ--VHSYIIKM--GFDSNVPVCNAILTMYAKCSVLCNALLVFKELG------KNADS 366
M+ +H +K GF S + V N + T SV ++ L K A
Sbjct: 675 DKMRHIMHERGVKKVPGF-SWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGY 733
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLA 394
VS ++ ++ + E + + S LA
Sbjct: 734 VSATDMVLHDVEEEEKEHMLKYHSEKLA 761
>gi|15218851|ref|NP_171853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180299|sp|Q9LR69.1|PPR8_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g03540
gi|9280645|gb|AAF86514.1|AC002560_7 F21B7.16 [Arabidopsis thaliana]
gi|91805735|gb|ABE65596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189463|gb|AEE27584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 609
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 153/505 (30%), Positives = 253/505 (50%), Gaps = 48/505 (9%)
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
Q +AI++ S + + S+++ C+ + S G Q HAHV+KS + N
Sbjct: 41 QLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGN 100
Query: 176 ALIAMYTKFDR-ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
+L+++Y K + + R VF G KD SW SM++ + ++AL F EM+ G
Sbjct: 101 SLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFG-L 159
Query: 235 QPNEFIFGSVFSACSNF----------------------------------------ARI 254
NEF S ACS AR
Sbjct: 160 DANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARR 219
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGRL 313
+F+E+ PD+ W A+++ + + EA+ LF M R + L+PDG T ++L AC
Sbjct: 220 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
L QG ++H +I G SNV V +++L MY KC + A VF + K +SVSW++++
Sbjct: 280 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK-NSVSWSALL 338
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
Q+ + E+ +F M + D F V+ ACA +A++ + ++H + G
Sbjct: 339 GGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCF 394
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
+V V + L+D+Y K G + SA ++++ M ++++W++++ AQ G G+EA+ F M
Sbjct: 395 GNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDM 454
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
G+ P+ ++ + +LTAC H G+V+EG + + +M YGI P EH SC++DLL RAG
Sbjct: 455 VKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGL 514
Query: 554 VHEAEDFINQMACDADIVVWKSLLA 578
EAE+ + + C D +W LL
Sbjct: 515 FEEAENLLERAECRNDASLWGVLLG 539
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 136/513 (26%), Positives = 240/513 (46%), Gaps = 54/513 (10%)
Query: 9 LCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQP 68
LCK EA+ + S +++ I P YA L+ C+ + S G + H H++ S +
Sbjct: 36 LCKLGQLTEAIRILN-STHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLET 94
Query: 69 DVVLQNHILNMYGKCG-SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
D + N +L++Y K G + + R FD ++ +SWT+M++G + A++++++M
Sbjct: 95 DRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEM 154
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG---SHLIAQNALIAMYTKF 184
+ G+ +FT S +KACS LG V LGR H VI HG +H I+ + L +Y
Sbjct: 155 VSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVIT--HGFEWNHFIS-STLAYLYGVN 211
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+DAR VF + DV W ++++AFSK EAL F M P+ FG+V
Sbjct: 212 REPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTV 271
Query: 245 FSACSNF----------------------------------------ARILFNEIDSPDL 264
+AC N AR +FN + +
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNS 331
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
SW+AL+ G + +A+ +F EM +++L G ++L AC G + G ++H
Sbjct: 332 VSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFG----TVLKACAGLAAVRLGKEIHGQ 387
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
++ G NV V +A++ +Y K + +A V+ ++ + ++WN++++A Q+ + EE
Sbjct: 388 YVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSALAQNGRGEE 446
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLM 443
F+ M+ IKPD+I+F ++ AC ++ + K+ G+ + ++
Sbjct: 447 AVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMI 506
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
D+ + G A L E + S ++LG
Sbjct: 507 DLLGRAGLFEEAENLLERAECRNDASLWGVLLG 539
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 151/245 (61%), Gaps = 5/245 (2%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S+ K +LY EAL + + ST+ +++AC +LR L+ G+++H ++ +
Sbjct: 236 LSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNG 295
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+VV+++ +L+MYGKCGS+ +AR F+ M ++N VSW+A++ G QN + AI+++
Sbjct: 296 IGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFR 355
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + + + FG+++KAC+GL +V LG+++H ++ ++I ++ALI +Y K
Sbjct: 356 EMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSG 411
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I A V+S ++ +++ +W +M++A ++ G EA+ FN+M+ G +P+ F ++
Sbjct: 412 CIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG-IKPDYISFIAIL 470
Query: 246 SACSN 250
+AC +
Sbjct: 471 TACGH 475
>gi|297839569|ref|XP_002887666.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333507|gb|EFH63925.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 675
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 163/535 (30%), Positives = 274/535 (51%), Gaps = 67/535 (12%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N +++ + K G L AR FD MP+++VV+ +++ G N +A++L+ ++ S
Sbjct: 108 NVVISGFAKAGELSVARRLFDAMPEKDVVTLNSLLHGYILNGYSEEALRLFKELKFSA-- 165
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
T +++KAC+ L ++ G+Q+HA ++ ++L+ +Y K + A +
Sbjct: 166 -DAITLTTVLKACAELEALKRGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYM 224
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR 253
I D S ++I+ ++ G NE +R
Sbjct: 225 LEQIGEPDDHSLSTLISGYANCG-------RVNE------------------------SR 253
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
LF+ + + WN++I+G +++ EA+ LF+EMR+ E D T+ +++ ACIG
Sbjct: 254 RLFDRKSNRCVILWNSMISGYIANNMKFEALVLFNEMRN-ETWEDSRTLAAVINACIGLG 312
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC-----------------SVLCNALL- 355
L G Q+H + K G ++ V + +L MY+KC ++L N+++
Sbjct: 313 FLETGKQMHCHACKFGLVDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIK 372
Query: 356 -------------VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
VF+ + +N +SWNS+ Q+ E FS+M + D +
Sbjct: 373 VYFSCGRIDDAKRVFERI-ENKSLISWNSMTNGFSQNGCPVETLEYFSQMHKLDLPTDEV 431
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
+ + V+ ACA ++SL + Q+ T GL D V + L+D+Y KCGS+ + R++F+ M
Sbjct: 432 SLSSVISACASISSLGLGEQVFARATIVGLDSDQIVSSSLIDLYCKCGSVENGRRVFDTM 491
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGL 522
D V W+S+I GYA G G EA+ LF +M G+ P +T + VLTAC++ GLVEEG
Sbjct: 492 VKSDEVPWNSMISGYATNGHGFEAIDLFKKMSIAGIRPTQITFMVVLTACNYCGLVEEGR 551
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
L+ M+ ++G +P +EH SC+VDLLARAG V EA D + +M DAD +W S+L
Sbjct: 552 LLFEAMKLDHGFVPDKEHFSCMVDLLARAGYVEEAIDLVEEMPFDADASMWSSVL 606
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 193/452 (42%), Gaps = 117/452 (25%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE--------- 87
T ++ AC+ L +L+ G+++H IL+ + D + + ++N+Y KCG L
Sbjct: 169 TLTTVLKACAELEALKRGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQI 228
Query: 88 ----------------------DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
++R FD+ R V+ W +MI+G N + +A+ L+
Sbjct: 229 GEPDDHSLSTLISGYANCGRVNESRRLFDRKSNRCVILWNSMISGYIANNMKFEALVLFN 288
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK-----------------SEHG 168
+M ++ T ++I AC GLG + G+Q+H H K S+ G
Sbjct: 289 EM-RNETWEDSRTLAAVINACIGLGFLETGKQMHCHACKFGLVDDIVVASTLLDMYSKCG 347
Query: 169 SHL--------------IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
S + I N++I +Y RI DA+ VF I K + SW SM FS+
Sbjct: 348 SPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQ 407
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARILFNEIDSPDL 264
G +E L +F++M H +E SV SAC++ FAR +DS +
Sbjct: 408 NGCPVETLEYFSQM-HKLDLPTDEVSLSSVISACASISSLGLGEQVFARATIVGLDSDQI 466
Query: 265 AS------------------------------WNALIAGVASHSNANEAMSLFSEMRDRE 294
S WN++I+G A++ + EA+ LF +M
Sbjct: 467 VSSSLIDLYCKCGSVENGRRVFDTMVKSDEVPWNSMISGYATNGHGFEAIDLFKKMSIAG 526
Query: 295 LLPDGLTVHSLLCAC-------IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
+ P +T +L AC GRL L++ M+ + GF + + ++ + A+
Sbjct: 527 IRPTQITFMVVLTACNYCGLVEEGRL-LFEAMK-----LDHGFVPDKEHFSCMVDLLARA 580
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+ A+ + +E+ +AD+ W+S++ C+ +
Sbjct: 581 GYVEEAIDLVEEMPFDADASMWSSVLRGCVAN 612
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 182/412 (44%), Gaps = 52/412 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S N+ EALV ++ +N T R T A +I+AC L L+ G+++H H
Sbjct: 268 NSMISGYIANNMKFEALVLFNEMRNETWEDSR--TLAAVINACIGLGFLETGKQMHCHAC 325
Query: 63 LSKCQPDVVLQNHILNMYGKCGS-------------------------------LEDARM 91
D+V+ + +L+MY KCGS ++DA+
Sbjct: 326 KFGLVDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKR 385
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
F+++ ++++SW +M G SQN + ++ + QM + + + + S+I AC+ + S
Sbjct: 386 VFERIENKSLISWNSMTNGFSQNGCPVETLEYFSQMHKLDLPTDEVSLSSVISACASISS 445
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ LG Q+ A S I ++LI +Y K + + R VF + + D W SMI+
Sbjct: 446 LGLGEQVFARATIVGLDSDQIVSSSLIDLYCKCGSVENGRRVFDTMVKSDEVPWNSMISG 505
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFNEID-----S 261
++ G+ EA+ F +M G +P + F V +AC+ R+LF +
Sbjct: 506 YATNGHGFEAIDLFKKMSIAG-IRPTQITFMVVLTACNYCGLVEEGRLLFEAMKLDHGFV 564
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
PD ++ ++ +A EA+ L EM D S+L C+ G +V
Sbjct: 565 PDKEHFSCMVDLLARAGYVEEAIDLVEEM---PFDADASMWSSVLRGCVANGYKAMGKKV 621
Query: 322 HSYIIKMGFDSNVPVC--NAILTMYA--KCSVLCNALLVFKELGKNADSVSW 369
II++ +++V +AI + S L L+ + KN S SW
Sbjct: 622 AEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVSKNPGS-SW 672
>gi|356537365|ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Glycine max]
Length = 722
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 164/536 (30%), Positives = 269/536 (50%), Gaps = 48/536 (8%)
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
PD +L+ K S+E A FD +P+ ++ W A+I GC++ + A L+ M
Sbjct: 110 PDAYSWTTLLSACAKLDSVEHALKVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDM 169
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
+ GV ++TF +++ CS L GR +H+ VIKS N+LI MY K +
Sbjct: 170 NKMGVKADKYTFATMLSLCS-LELFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCV 228
Query: 188 LDARNVFSGIAR---KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+DA VF +D S+ +MI F+ + +A F +M G + P E F SV
Sbjct: 229 VDACEVFEEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDM-QKGCFDPTEVTFVSV 287
Query: 245 FSACSN--------------------------------FARIL-----FNEIDSPDLASW 267
S+CS+ F ++ F ++ D+ SW
Sbjct: 288 MSSCSSLRAGCQAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSW 347
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
N +++ + EAM + +MR + PD T SLL A +L +HS + K
Sbjct: 348 NIMVSMFLQENLEEEAMLSYLKMRREGIEPDEFTYGSLLAATD---SLQVVEMIHSLLCK 404
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
G + V NA+++ Y + + A +F + + +SWNSII+ L + +
Sbjct: 405 SGL-VKIEVLNALVSAYCRHGKIKRAFQIFSGVPYKS-LISWNSIISGFLMNGHPLQGLE 462
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
FS +L++Q+KP+ + + V+ C+ M+++ Q+H YI + G + +V + N L+ +Y
Sbjct: 463 QFSALLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYA 522
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR-SLGVSPNLVTLV 506
KCGSL A ++F+ M D ++W+++I YAQ G G+EA+ F M+ S G+ P+ T
Sbjct: 523 KCGSLDKALRVFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFT 582
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
VL+ACSH GLV++G+ ++ M YG +P+ +H SC+VDLL R+G + EAE I
Sbjct: 583 SVLSACSHAGLVDDGIRIFDTMVKVYGFVPSVDHFSCIVDLLGRSGYLDEAERVIK 638
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 188/416 (45%), Gaps = 39/416 (9%)
Query: 107 MIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE 166
M+A +++ Q ++KL++ S P + + I A + G QLHA +++
Sbjct: 17 MLAALARSNQHTQSLKLFVHA-HSSFTPDHYILSTAITAAANARRAAFGAQLHALAVRTG 75
Query: 167 HGSHLIAQNALIAMYTKFDRIL-DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHF 225
G+H N+L+++Y K R L + F I D SW ++++A +KL AL
Sbjct: 76 LGAHSHVANSLLSLYAKAHRDLASVKLTFQEIDCPDAYSWTTLLSACAKLDSVEHAL--- 132
Query: 226 NEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
+F+ I +A WNA+I G A N + A
Sbjct: 133 ----------------------------KVFDGIPKGHIAVWNAVITGCAEKGNRDFAFG 164
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
LF +M + D T ++L C L Y G VHS +IK GF V N+++TMY
Sbjct: 165 LFRDMNKMGVKADKYTFATMLSLCSLELFDY-GRHVHSVVIKSGFLGWTSVVNSLITMYF 223
Query: 346 KCSVLCNALLVFKEL--GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
KC + +A VF+E G + D VS+N++I ++E+ F +F M P +T
Sbjct: 224 KCGCVVDACEVFEEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVT 283
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
F VM +C +SL Q K G V V N +M +Y G + + +F ME
Sbjct: 284 FVSVMSSC---SSLRAGCQAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGME 340
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
DVVSW+ ++ + Q +EA+ + +MR G+ P+ T +L A + +VE
Sbjct: 341 ERDVVSWNIMVSMFLQENLEEEAMLSYLKMRREGIEPDEFTYGSLLAATDSLQVVE 396
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 128/249 (51%), Gaps = 7/249 (2%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS ++NL EA+++Y I TY L++A SL+ +++ H L
Sbjct: 348 NIMVSMFLQENLEEEAMLSY-LKMRREGIEPDEFTYGSLLAATDSLQVVEM-----IHSL 401
Query: 63 LSKCQ-PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
L K + + N +++ Y + G ++ A F +P ++++SW ++I+G N +
Sbjct: 402 LCKSGLVKIEVLNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQGL 461
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+ + +L + V P ++ ++ CS + ++ G+Q+H ++++ S + NAL+ MY
Sbjct: 462 EQFSALLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMY 521
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K + A VF + +D +W ++I+A+++ G EA+C F M +P++ F
Sbjct: 522 AKCGSLDKALRVFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATF 581
Query: 242 GSVFSACSN 250
SV SACS+
Sbjct: 582 TSVLSACSH 590
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 172/576 (29%), Positives = 291/576 (50%), Gaps = 57/576 (9%)
Query: 50 SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIA 109
+LQ + +H +++S +V + ++N+Y G++ AR FD + R+V +W MI+
Sbjct: 66 NLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMIS 125
Query: 110 GCSQNYQENDAIKLY-IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG 168
G + ++ I+ + + ML SG+ P TF S++KAC +V G ++H +K
Sbjct: 126 GYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACR---NVTDGNKIHCLALKFGFM 182
Query: 169 SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
+ +LI +Y ++ +++AR +F + +D+ SW +MI+ + + G EAL
Sbjct: 183 WDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEAL-----T 237
Query: 229 LHHGAYQPNEFIFGSVFSACS---NFAR-------------------------------- 253
L G + S+ SAC+ +F R
Sbjct: 238 LSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGS 297
Query: 254 -----ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL--L 306
+F+ + DL SWN++I + A+ LF EMR + PD LT+ SL +
Sbjct: 298 LKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASI 357
Query: 307 CACIGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
+ +G + + +Q + ++ G F ++ + NA++ MYAK ++ +A VF L N D
Sbjct: 358 LSQLGEIRACRSVQ--GFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL-PNKD 414
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRML--ASQIKPDHITFNDVMGACAKMASLEMVTQL 423
+SWN+II+ Q+ A E +++ M +I + T+ V+ AC++ +L +L
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKL 474
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H + K GL DVFV L D+Y KCG L A LF + + V W++LI + G G
Sbjct: 475 HGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHG 534
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
++A+ LF M GV P+ +T V +L+ACSH GLV+EG + +M+ +YGI P+ +H C
Sbjct: 535 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGC 594
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+VDL RAG + A +FI M D +W +LL++
Sbjct: 595 MVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSA 630
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 229/479 (47%), Gaps = 52/479 (10%)
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
++ + C+ L S + LHA ++ S ++ L+ +Y + AR F I +
Sbjct: 59 TLFRYCTNLQS---AKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNR 115
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------- 251
DV +W MI+ + + GY E + F+ + QP+ F SV AC N
Sbjct: 116 DVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTDGNKIHCL 175
Query: 252 ----------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEA 283
ARILF+E+ + D+ SWNA+I+G NA EA
Sbjct: 176 ALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEA 235
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
++L +R D +TV SLL AC +G+ +HSY IK G +S + V N ++ +
Sbjct: 236 LTLSDGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
YA+ L + VF + D +SWNSII A + Q LF M S+I+PD +T
Sbjct: 292 YAEFGSLKDCQKVFDRMYVR-DLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLT 350
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAF-DVFVMNGLMDIYIKCGSLGSARKLFNFM 462
+ +++ + + + + G D+ + N ++ +Y K G + SAR +FN++
Sbjct: 351 LISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 410
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG--VSPNLVTLVGVLTACSHVGLVEE 520
N DV+SW+++I GYAQ G EA++++ M G +S N T V VL ACS G + +
Sbjct: 411 PNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQ 470
Query: 521 GLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G+ L+ R+++N G+ + + D+ + G + +A Q+ + V W +L+A
Sbjct: 471 GMKLHGRLLKN--GLYLDVFVGTSLADMYGKCGRLDDALSLFYQIP-RVNSVPWNTLIA 526
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 203/475 (42%), Gaps = 53/475 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS-TYAGLISACSSLRSLQLGRKVHDHI 61
N +S C+ EAL D +R S T L+SAC+ G +H +
Sbjct: 220 NAMISGYCQSGNAKEALTLSD------GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYS 273
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ + ++ + N ++++Y + GSL+D + FD+M R+++SW ++I N Q AI
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI-KSEHGSHLIAQNALIAM 180
L+ +M S + P T S+ S LG + R + + K + NA++ M
Sbjct: 334 LLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA-YQPNEF 239
Y K + AR VF+ + KDV SW ++I+ +++ G+ EA+ +N M G N+
Sbjct: 394 YAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQG 453
Query: 240 IFGSVFSACSNFARI----------------------------------------LFNEI 259
+ SV ACS + LF +I
Sbjct: 454 TWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQI 513
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
+ WN LIA H + +A+ LF EM D + PD +T +LL AC + +G
Sbjct: 514 PRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGE 573
Query: 320 QVHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
+ G ++ ++ +Y + L AL K + D+ W ++++AC
Sbjct: 574 WCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRV 633
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGAC-AKMASLEMVTQLHCYITKTGL 432
H +L ++ S L +++P+H+ ++ ++ A E V ++ + GL
Sbjct: 634 HGNV-DLGKIASEHLF-EVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGL 686
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 108/278 (38%), Gaps = 73/278 (26%)
Query: 3 NDYVSSLCKQNLYNEALVAYDF-SQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
N +S + +EA+ Y+ + I T+ ++ ACS +L+ G K+H +
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRL 478
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLED-------------------------------AR 90
L + DV + + +MYGKCG L+D A
Sbjct: 479 LKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAV 538
Query: 91 MGFDKMPQRNV----VSWTAMIAGCSQN-------------------------------- 114
M F +M V +++ +++ CS +
Sbjct: 539 MLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDL 598
Query: 115 YQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV--IKSEH-GSH 170
Y +++ + ++S + P +G+++ AC G+V LG+ H+ ++ EH G H
Sbjct: 599 YGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYH 658
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
++ N + A K++ + + R++ SG + W SM
Sbjct: 659 VLLSN-MYASAGKWEGVDEIRSITSGKGLRKTPGWSSM 695
>gi|296084001|emb|CBI24389.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 164/571 (28%), Positives = 270/571 (47%), Gaps = 107/571 (18%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQE--NDAIKLYIQMLQSGVM 133
+L Y + G + AR F+KMPQR S+ AMI +++ +A KL+ +M +
Sbjct: 68 MLTAYYENGHIAKARKMFEKMPQRTTASYNAMITAYTRSNPMMIGEASKLFAEMRERN-- 125
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
++ ++I + G V +L+ + NALI+ Y K R+ +A +
Sbjct: 126 --SISYAAMITGLARAGMVDNAEELYLETPVEWRDP--VCSNALISGYLKVGRLEEATRI 181
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR 253
F G+ +DV SW SM+ + K G + H AR
Sbjct: 182 FEGMGERDVISWSSMVDGYCKKG----KIGH---------------------------AR 210
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL---PDGLTVHSLLCACI 310
LF + ++ +W A+I G LF MR + P LTV C+
Sbjct: 211 ELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEF 270
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
G +G+Q+H + +MGF+ +V + NAI+ MY + S + A +F + + D VSWN
Sbjct: 271 GEYK--EGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRK-DVVSWN 327
Query: 371 SIIAACLQHNQAE----------------------------------ELFRL-------- 388
++IA +Q+++ E ELFR+
Sbjct: 328 ALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIA 387
Query: 389 --------------------FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
F ML ++P+ +T + V+ A A +A+L Q+H +
Sbjct: 388 WTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVV 447
Query: 429 KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
K G+ FD+ + N L+ +Y KCG++ ++F + +P++VS++S+I G+AQ G G+EAL+
Sbjct: 448 KMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALE 507
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLL 548
LF +M + G PN +T +GVL+AC+HVGL+E+G + ++ M++ Y I P H +C+VDLL
Sbjct: 508 LFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLL 567
Query: 549 ARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
RAG + +A D I M C+ VW +LL +
Sbjct: 568 GRAGFLDDAIDLIRSMPCEPHSGVWGALLGA 598
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 194/375 (51%), Gaps = 13/375 (3%)
Query: 51 LQLGR-KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIA 109
L++GR + I + DV+ + +++ Y K G + AR F++MP+RNVV+WTAMI
Sbjct: 170 LKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMID 229
Query: 110 GCSQNYQENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG 168
G + L+++M + G V T + +ACS G G Q+H V +
Sbjct: 230 GHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFE 289
Query: 169 SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
+ NA+I MY +F +++AR +F + RKDV SW ++IA GY +
Sbjct: 290 FDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIA-----GYVQNDEVEEGYV 344
Query: 229 LHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEA 283
L Q + + ++ + SN ++ LF + D +W A+I+G + EA
Sbjct: 345 LFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEA 404
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
+ F EM + + P+ LT+ S+L A G TL QG+Q+H+ ++KMG + ++ + N++++M
Sbjct: 405 IYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSM 464
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
Y KC + + +F + + + VS+NS+I Q+ EE LF +ML KP+ IT
Sbjct: 465 YTKCGNVADGHQIFTSI-NSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEIT 523
Query: 404 FNDVMGACAKMASLE 418
F V+ AC + LE
Sbjct: 524 FLGVLSACTHVGLLE 538
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 203/484 (41%), Gaps = 107/484 (22%)
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ------- 129
+ +G+ G L++A F +MP +N +SWTAM+ +N A K++ +M Q
Sbjct: 38 ITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTASYN 97
Query: 130 ---------SGVMPGQ-------------FTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
+ +M G+ ++ ++I + G V +L+
Sbjct: 98 AMITAYTRSNPMMIGEASKLFAEMRERNSISYAAMITGLARAGMVDNAEELYLETPVEWR 157
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
+ NALI+ Y K R+ +A +F G+ +DV SW SM+ + K G + H
Sbjct: 158 DP--VCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKG----KIGH--- 208
Query: 228 MLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
AR LF + ++ +W A+I G LF
Sbjct: 209 ------------------------ARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLF 244
Query: 288 SEMRDRELL---PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
MR + P LTV C+ G +G+Q+H + +MGF+ +V + NAI+ MY
Sbjct: 245 LRMRKEGFVKVNPTTLTVMFEACSEFGEYK--EGIQMHGLVSRMGFEFDVFLGNAIIIMY 302
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
+ S + A +F + + D VSWN++IA +Q+++ EE + LF + +Q K
Sbjct: 303 CRFSFVVEARKIFDMMNRK-DVVSWNALIAGYVQNDEVEEGYVLFEK---TQQK------ 352
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
DV ++ + G +G + +LF M
Sbjct: 353 ------------------------------DVISWTTMITGFSNKGKMGKSIELFRMMPK 382
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
D ++W+++I G+ G +EA+ F M V PN +TL VL+A + + + +GL +
Sbjct: 383 QDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQI 442
Query: 525 YRIM 528
+ ++
Sbjct: 443 HTLV 446
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 164/381 (43%), Gaps = 84/381 (22%)
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
+A ++FS + K+ SW +M+ A+ + G+ +
Sbjct: 49 EAESIFSRMPHKNAISWTAMLTAYYENGHIAK---------------------------- 80
Query: 249 SNFARILFNEIDSPDLASWNALIAGVASHSNA---NEAMSLFSEMRDRELLPDGLTVHSL 305
AR +F ++ AS+NA+I + SN EA LF+EMR+R + + L
Sbjct: 81 ---ARKMFEKMPQRTTASYNAMITAY-TRSNPMMIGEASKLFAEMRERNSISYAAMITGL 136
Query: 306 LCACIGRLTLYQGM--QVHSYIIKMGFDSNVPVC-NAILTMYAKCSVLCNALLVFKELGK 362
A GM ++ + PVC NA+++ Y K L A +F+ +G+
Sbjct: 137 ARA---------GMVDNAEELYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGE 187
Query: 363 NADSVSWNSIIAACLQHNQ---AEELFR----------------------------LFSR 391
D +SW+S++ + + A ELF LF R
Sbjct: 188 R-DVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLR 246
Query: 392 MLASQ-IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
M +K + T + AC++ + Q+H +++ G FDVF+ N ++ +Y +
Sbjct: 247 MRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFS 306
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ ARK+F+ M DVVSW++LI GY Q +E LF + + ++++ ++T
Sbjct: 307 FVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQ----QKDVISWTTMIT 362
Query: 511 ACSHVGLVEEGLHLYRIMENE 531
S+ G + + + L+R+M +
Sbjct: 363 GFSNKGKMGKSIELFRMMPKQ 383
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 120/282 (42%), Gaps = 63/282 (22%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+++ P+T + ACS + G ++H + + DV L N I+ MY + + +AR
Sbjct: 253 VKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEAR 312
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV------------------ 132
FD M +++VVSW A+IAG QN + + L+ + Q V
Sbjct: 313 KIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGK 372
Query: 133 -------MPGQ--FTFGSIIKACSGLGS-------------------------------- 151
MP Q + ++I G G
Sbjct: 373 SIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAG 432
Query: 152 -VCLGRQLHAHVIKSEHGSH--LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
L + L H + + G L QN+L++MYTK + D +F+ I ++ S+ SM
Sbjct: 433 LATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSM 492
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
I F++ G+ EAL F++ML+ G +PNE F V SAC++
Sbjct: 493 ITGFAQNGFGEEALELFHKMLNEGQ-KPNEITFLGVLSACTH 533
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 71/120 (59%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+R P T + ++SA + L +L G ++H ++ + D+ +QN +++MY KCG++ D
Sbjct: 416 VRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGH 475
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F + N+VS+ +MI G +QN +A++L+ +ML G P + TF ++ AC+ +G
Sbjct: 476 QIFTSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVG 535
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 163/553 (29%), Positives = 279/553 (50%), Gaps = 64/553 (11%)
Query: 50 SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIA 109
++ R++ D + S + V N +++ Y K G + +A+ FD+MP +N++SW +M+A
Sbjct: 83 EVEKARELFDSLPCS-YRKGVACWNAMISGYVKKGRVNEAKRLFDEMPVKNLISWNSMLA 141
Query: 110 GCSQNYQENDAIKLYIQM---------------LQSGVMPGQFTFGSIIKACSGLGSVCL 154
G +QN + ++ + +M +Q G + + F + + + V +
Sbjct: 142 GYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGDLDSAWKFFQETQKPNVVSWVTM 201
Query: 155 --GRQLHAHVIKSEH------GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
G + ++++S ++++ NA+I+ Y + I +A +F + +D SW
Sbjct: 202 LSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQRCEIDEASRLFEEMPERDSVSWT 261
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLAS 266
+MI + ++G EA NEM + I G + + AR F+EI + D+
Sbjct: 262 TMINGYVRIGKLDEARELLNEMPYRNIGAQTAMISGYIQCNKVDEARRFFDEIGTWDVVC 321
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WNA+IAG A H NEA+ L M +++++
Sbjct: 322 WNAMIAGYAHHGRINEALCLSKRMVNKDMV------------------------------ 351
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
N +++ YA+ + A+ +F+E+G+ D VSWNS+IA + + Q +
Sbjct: 352 ---------TWNTMISCYAQVGQMDRAVKIFEEMGER-DLVSWNSLIAGFMLNGQNLDAL 401
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
+ F+ M KPD ++F + +CA +A+L++ QLH + K G + V N L+ +Y
Sbjct: 402 KSFALMGHEGKKPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMY 461
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KCG + A +FN + + DV+SW+SLI GYA G G EALKLF M S G++P+ VT +
Sbjct: 462 AKCGRILEAGLVFNGICHADVISWNSLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFI 521
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
G+L+AC+H G+V+ GL L++ M Y I P EH +C+VDLL R G + EA + + M
Sbjct: 522 GILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEIVRGMKV 581
Query: 567 DADIVVWKSLLAS 579
A VW +LL +
Sbjct: 582 KATAGVWGALLGA 594
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 132/537 (24%), Positives = 239/537 (44%), Gaps = 74/537 (13%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
+ + V N ++++Y K G + AR FDKMP+RN+VSW M++G N + ++A KL++
Sbjct: 3 EKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFV- 61
Query: 127 MLQSGVMPGQ--FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
+MP + F++ +I + G V R+L + + + NA+I+ Y K
Sbjct: 62 -----IMPRRDLFSWTLMITCYTRNGEVEKARELF-DSLPCSYRKGVACWNAMISGYVKK 115
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
R+ +A+ +F + K++ SW SM+A +++ L FNEM N + G +
Sbjct: 116 GRVNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFI 175
Query: 245 FSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
+ A F E P++ SW +++G A + N E+ LF +M R ++ + +
Sbjct: 176 QVGDLDSAWKFFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISA 235
Query: 305 LLCAC------------IGRLTLYQGMQVHSYIIKMGFDS-----------NVPVCNAIL 341
+ C R ++ ++ Y+ D N+ A++
Sbjct: 236 YVQRCEIDEASRLFEEMPERDSVSWTTMINGYVRIGKLDEARELLNEMPYRNIGAQTAMI 295
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+ Y +C+ + A F E+G D V WN++IA H + E L RM + D
Sbjct: 296 SGYIQCNKVDEARRFFDEIG-TWDVVCWNAMIAGYAHHGRINEALCLSKRM----VNKDM 350
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
+T+N T + C Y + G + A K+F
Sbjct: 351 VTWN---------------TMISC--------------------YAQVGQMDRAVKIFEE 375
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
M D+VSW+SLI G+ G +ALK F M G P+ ++ L++C+ + ++ G
Sbjct: 376 MGERDLVSWNSLIAGFMLNGQNLDALKSFALMGHEGKKPDQLSFACGLSSCATIAALQVG 435
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
L++++ + G + + ++ + A+ G + EA N + C AD++ W SL+
Sbjct: 436 NQLHQVVV-KGGYLNYLVVNNALITMYAKCGRILEAGLVFNGI-CHADVISWNSLIG 490
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
++A +S+C+++ +LQ+G ++H ++ +V+ N ++ MY KCG + +A + F+ +
Sbjct: 418 SFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYAKCGRILEAGLVFNGI 477
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+V+SW ++I G + N +A+KL+ +M G+ P + TF I+ AC+ G V G
Sbjct: 478 CHADVISWNSLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFIGILSACNHAGMVDHGL 537
Query: 157 QLHAHVIKSEHGSHLIAQNA-LIAMYTKFDRILDARNVFSGIARKDVTS-WGSMIAA 211
+L + K L A ++ + + R+ +A + G+ K WG+++ A
Sbjct: 538 KLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEIVRGMKVKATAGVWGALLGA 594
>gi|359479080|ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial [Vitis vinifera]
Length = 744
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 164/571 (28%), Positives = 270/571 (47%), Gaps = 107/571 (18%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQE--NDAIKLYIQMLQSGVM 133
+L Y + G + AR F+KMPQR S+ AMI +++ +A KL+ +M +
Sbjct: 147 MLTAYYENGHIAKARKMFEKMPQRTTASYNAMITAYTRSNPMMIGEASKLFAEMRERN-- 204
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
++ ++I + G V +L+ + NALI+ Y K R+ +A +
Sbjct: 205 --SISYAAMITGLARAGMVDNAEELYLET--PVEWRDPVCSNALISGYLKVGRLEEATRI 260
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR 253
F G+ +DV SW SM+ + K G + H AR
Sbjct: 261 FEGMGERDVISWSSMVDGYCKKG----KIGH---------------------------AR 289
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL---PDGLTVHSLLCACI 310
LF + ++ +W A+I G LF MR + P LTV C+
Sbjct: 290 ELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEF 349
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
G +G+Q+H + +MGF+ +V + NAI+ MY + S + A +F + + D VSWN
Sbjct: 350 GEYK--EGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRK-DVVSWN 406
Query: 371 SIIAACLQHNQAE----------------------------------ELFRL-------- 388
++IA +Q+++ E ELFR+
Sbjct: 407 ALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIA 466
Query: 389 --------------------FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
F ML ++P+ +T + V+ A A +A+L Q+H +
Sbjct: 467 WTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVV 526
Query: 429 KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
K G+ FD+ + N L+ +Y KCG++ ++F + +P++VS++S+I G+AQ G G+EAL+
Sbjct: 527 KMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALE 586
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLL 548
LF +M + G PN +T +GVL+AC+HVGL+E+G + ++ M++ Y I P H +C+VDLL
Sbjct: 587 LFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLL 646
Query: 549 ARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
RAG + +A D I M C+ VW +LL +
Sbjct: 647 GRAGFLDDAIDLIRSMPCEPHSGVWGALLGA 677
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 194/375 (51%), Gaps = 13/375 (3%)
Query: 51 LQLGR-KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIA 109
L++GR + I + DV+ + +++ Y K G + AR F++MP+RNVV+WTAMI
Sbjct: 249 LKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMID 308
Query: 110 GCSQNYQENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG 168
G + L+++M + G V T + +ACS G G Q+H V +
Sbjct: 309 GHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFE 368
Query: 169 SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
+ NA+I MY +F +++AR +F + RKDV SW ++IA GY +
Sbjct: 369 FDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIA-----GYVQNDEVEEGYV 423
Query: 229 LHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEA 283
L Q + + ++ + SN ++ LF + D +W A+I+G + EA
Sbjct: 424 LFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEA 483
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
+ F EM + + P+ LT+ S+L A G TL QG+Q+H+ ++KMG + ++ + N++++M
Sbjct: 484 IYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSM 543
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
Y KC + + +F + + + VS+NS+I Q+ EE LF +ML KP+ IT
Sbjct: 544 YTKCGNVADGHQIFTSI-NSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEIT 602
Query: 404 FNDVMGACAKMASLE 418
F V+ AC + LE
Sbjct: 603 FLGVLSACTHVGLLE 617
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 203/484 (41%), Gaps = 107/484 (22%)
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ------- 129
+ +G+ G L++A F +MP +N +SWTAM+ +N A K++ +M Q
Sbjct: 117 ITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTASYN 176
Query: 130 ---------SGVMPGQ-------------FTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
+ +M G+ ++ ++I + G V +L+
Sbjct: 177 AMITAYTRSNPMMIGEASKLFAEMRERNSISYAAMITGLARAGMVDNAEELYLET--PVE 234
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
+ NALI+ Y K R+ +A +F G+ +DV SW SM+ + K G + H
Sbjct: 235 WRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKG----KIGH--- 287
Query: 228 MLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
AR LF + ++ +W A+I G LF
Sbjct: 288 ------------------------ARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLF 323
Query: 288 SEMRDRELL---PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
MR + P LTV C+ G +G+Q+H + +MGF+ +V + NAI+ MY
Sbjct: 324 LRMRKEGFVKVNPTTLTVMFEACSEFGEYK--EGIQMHGLVSRMGFEFDVFLGNAIIIMY 381
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
+ S + A +F + + D VSWN++IA +Q+++ EE + LF + +Q K
Sbjct: 382 CRFSFVVEARKIFDMMNRK-DVVSWNALIAGYVQNDEVEEGYVLFEK---TQQK------ 431
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
DV ++ + G +G + +LF M
Sbjct: 432 ------------------------------DVISWTTMITGFSNKGKMGKSIELFRMMPK 461
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
D ++W+++I G+ G +EA+ F M V PN +TL VL+A + + + +GL +
Sbjct: 462 QDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQI 521
Query: 525 YRIM 528
+ ++
Sbjct: 522 HTLV 525
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 164/381 (43%), Gaps = 84/381 (22%)
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
+A ++FS + K+ SW +M+ A+ + G+ +
Sbjct: 128 EAESIFSRMPHKNAISWTAMLTAYYENGHIAK---------------------------- 159
Query: 249 SNFARILFNEIDSPDLASWNALIAGVASHSNA---NEAMSLFSEMRDRELLPDGLTVHSL 305
AR +F ++ AS+NA+I + SN EA LF+EMR+R + + L
Sbjct: 160 ---ARKMFEKMPQRTTASYNAMITAY-TRSNPMMIGEASKLFAEMRERNSISYAAMITGL 215
Query: 306 LCACIGRLTLYQGM--QVHSYIIKMGFDSNVPVC-NAILTMYAKCSVLCNALLVFKELGK 362
A GM ++ + PVC NA+++ Y K L A +F+ +G+
Sbjct: 216 ARA---------GMVDNAEELYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGE 266
Query: 363 NADSVSWNSIIAACLQHNQ---AEELFR----------------------------LFSR 391
D +SW+S++ + + A ELF LF R
Sbjct: 267 R-DVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLR 325
Query: 392 MLASQ-IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
M +K + T + AC++ + Q+H +++ G FDVF+ N ++ +Y +
Sbjct: 326 MRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFS 385
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ ARK+F+ M DVVSW++LI GY Q +E LF + + ++++ ++T
Sbjct: 386 FVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQ----QKDVISWTTMIT 441
Query: 511 ACSHVGLVEEGLHLYRIMENE 531
S+ G + + + L+R+M +
Sbjct: 442 GFSNKGKMGKSIELFRMMPKQ 462
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 120/282 (42%), Gaps = 63/282 (22%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+++ P+T + ACS + G ++H + + DV L N I+ MY + + +AR
Sbjct: 332 VKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEAR 391
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV------------------ 132
FD M +++VVSW A+IAG QN + + L+ + Q V
Sbjct: 392 KIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGK 451
Query: 133 -------MPGQ--FTFGSIIKACSGLGS-------------------------------- 151
MP Q + ++I G G
Sbjct: 452 SIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAG 511
Query: 152 -VCLGRQLHAHVIKSEHGSH--LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
L + L H + + G L QN+L++MYTK + D +F+ I ++ S+ SM
Sbjct: 512 LATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSM 571
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
I F++ G+ EAL F++ML+ G +PNE F V SAC++
Sbjct: 572 ITGFAQNGFGEEALELFHKMLNEGQ-KPNEITFLGVLSACTH 612
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 71/120 (59%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+R P T + ++SA + L +L G ++H ++ + D+ +QN +++MY KCG++ D
Sbjct: 495 VRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGH 554
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F + N+VS+ +MI G +QN +A++L+ +ML G P + TF ++ AC+ +G
Sbjct: 555 QIFTSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVG 614
>gi|359474850|ref|XP_002277741.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
gi|297744624|emb|CBI37886.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 164/553 (29%), Positives = 279/553 (50%), Gaps = 46/553 (8%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D + + +L+ Y K G + +A F+++P+R+VVSW+ MI G ++N +++L+ QM
Sbjct: 25 DPINYSKLLSCYLKSGDIINAGKLFEEIPKRDVVSWSIMIHGYNRNGFRRKSMELFSQMR 84
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
S ++P FT ++ + +GLG LG+ +H ++K S AL+ Y K ++
Sbjct: 85 ISSLVPTSFTMVGVLVSIAGLGDPVLGQCVHGLILKYGLDSDFRVVTALLNAYAKCGNVV 144
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
D+ VF + + S ++++ F EA+ FN+ G PN ++ AC
Sbjct: 145 DSYRVFEQLENPGLVSCSAIVSGFVYNELFEEAVVLFNQFRKLGMV-PNAATVLTLIRAC 203
Query: 249 S----------------------------------------NFARILFNEIDSPDLASWN 268
+ A +F ++ D+ SW
Sbjct: 204 VALESRRLCESIHGMVVKLSLVLDVAVNNSVLDMYSSMLDLDAATRVFEGMECRDVISWT 263
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
+I + A++A+ LF +MR+ + D + V +L+ AC L +G ++H+ I
Sbjct: 264 TMINLLVCLEYASDALMLFRQMRNTGICNDVVVVMNLISACAILGDLKRGREIHTQAIVC 323
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKEL-GKNADSVSWNSIIAACLQHNQAEELFR 387
GF S +P+ N+I+ MY+KC L ++ VF + GK+ VSW ++I C+Q+ E +
Sbjct: 324 GFGSELPLTNSIIAMYSKCGDLDSSRTVFDQTTGKSL--VSWTAMILGCVQNGYPREALK 381
Query: 388 LFSRMLASQ-IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
L +M + D I V+ A ++A LE+ QLHCY ++G V N L+ Y
Sbjct: 382 LLIKMRGEESFYLDSIMLIGVLSASGELALLELCQQLHCYAFESGFPRYRLVQNSLISAY 441
Query: 447 IKCGSLGSARKLFNFMEN-PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
KCG + A +F M D+VSW++++ GY G G+ A+ L+ MR +P+ T
Sbjct: 442 SKCGDVEPAYNVFGQMGYIRDIVSWNAILNGYGINGHGEIAVALYHEMRKGRENPDAATY 501
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
+ VL+ACSH GLV++GL ++ M E I P+++HC C+VDLLARAGC +A +F+++
Sbjct: 502 LCVLSACSHSGLVDDGLVIFNQMVEERTIRPSQDHCGCIVDLLARAGCFSDAREFVSRYM 561
Query: 566 CDADIVVWKSLLA 578
W++LL+
Sbjct: 562 EKMGPNAWRALLS 574
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 219/465 (47%), Gaps = 52/465 (11%)
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+H + HGS I + L++ Y K I++A +F I ++DV SW MI +++ G+
Sbjct: 13 IHTSTQRYPHGSDPINYSKLLSCYLKSGDIINAGKLFEEIPKRDVVSWSIMIHGYNRNGF 72
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSV--------------------------------- 244
+++ F++M + P F V
Sbjct: 73 RRKSMELFSQM-RISSLVPTSFTMVGVLVSIAGLGDPVLGQCVHGLILKYGLDSDFRVVT 131
Query: 245 -----FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
++ C N + +F ++++P L S +A+++G + EA+ LF++ R ++P
Sbjct: 132 ALLNAYAKCGNVVDSYRVFEQLENPGLVSCSAIVSGFVYNELFEEAVVLFNQFRKLGMVP 191
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+ TV +L+ AC+ + +H ++K+ +V V N++L MY+ L A VF
Sbjct: 192 NAATVLTLIRACVALESRRLCESIHGMVVKLSLVLDVAVNNSVLDMYSSMLDLDAATRVF 251
Query: 358 KELGKNADSVSWNSII--AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+ + + D +SW ++I CL++ A + LF +M + I D + +++ ACA +
Sbjct: 252 EGM-ECRDVISWTTMINLLVCLEY--ASDALMLFRQMRNTGICNDVVVVMNLISACAILG 308
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
L+ ++H G ++ + N ++ +Y KCG L S+R +F+ +VSW+++IL
Sbjct: 309 DLKRGREIHTQAIVCGFGSELPLTNSIIAMYSKCGDLDSSRTVFDQTTGKSLVSWTAMIL 368
Query: 476 GYAQFGCGDEALKLFTRMR-SLGVSPNLVTLVGVLTACSHVGLVE--EGLHLYRIMENEY 532
G Q G EALKL +MR + + L+GVL+A + L+E + LH Y E
Sbjct: 369 GCVQNGYPREALKLLIKMRGEESFYLDSIMLIGVLSASGELALLELCQQLHCYAF---ES 425
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
G R + ++ ++ G V A + QM DIV W ++L
Sbjct: 426 GFPRYRLVQNSLISAYSKCGDVEPAYNVFGQMGYIRDIVSWNAIL 470
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 220/508 (43%), Gaps = 67/508 (13%)
Query: 24 FSQNNTNIRIRPS-TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGK 82
FSQ + + S T G++ + + L LG+ VH IL D + +LN Y K
Sbjct: 80 FSQMRISSLVPTSFTMVGVLVSIAGLGDPVLGQCVHGLILKYGLDSDFRVVTALLNAYAK 139
Query: 83 CGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI 142
CG++ D+ F+++ +VS +A+++G N +A+ L+ Q + G++P T ++
Sbjct: 140 CGNVVDSYRVFEQLENPGLVSCSAIVSGFVYNELFEEAVVLFNQFRKLGMVPNAATVLTL 199
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
I+AC L S L +H V+K + N+++ MY+ + A VF G+ +DV
Sbjct: 200 IRACVALESRRLCESIHGMVVKLSLVLDVAVNNSVLDMYSSMLDLDAATRVFEGMECRDV 259
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEM------------------------LHHGAYQPNE 238
SW +MI L Y +AL F +M L G +
Sbjct: 260 ISWTTMINLLVCLEYASDALMLFRQMRNTGICNDVVVVMNLISACAILGDLKRGREIHTQ 319
Query: 239 FI---FGS----------VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEA 283
I FGS ++S C + +R +F++ L SW A+I G + EA
Sbjct: 320 AIVCGFGSELPLTNSIIAMYSKCGDLDSSRTVFDQTTGKSLVSWTAMILGCVQNGYPREA 379
Query: 284 MSLFSEMRDRE-LLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCNAIL 341
+ L +MR E D + + +L A G L L + Q+H Y + GF V N+++
Sbjct: 380 LKLLIKMRGEESFYLDSIMLIGVLSAS-GELALLELCQQLHCYAFESGFPRYRLVQNSLI 438
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+ Y+KC + A VF ++G D VSWN+I+ + E L+ M + PD
Sbjct: 439 SAYSKCGDVEPAYNVFGQMGYIRDIVSWNAILNGYGINGHGEIAVALYHEMRKGRENPDA 498
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLA-FDVFVMNG-----------LMDIYIKC 449
T+ V+ AC+ H + GL F+ V ++D+ +
Sbjct: 499 ATYLCVLSACS-----------HSGLVDDGLVIFNQMVEERTIRPSQDHCGCIVDLLARA 547
Query: 450 GSLGSARKLFN-FMENPDVVSWSSLILG 476
G AR+ + +ME +W +L+ G
Sbjct: 548 GCFSDAREFVSRYMEKMGPNAWRALLSG 575
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 174/416 (41%), Gaps = 43/416 (10%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VS L+ EA+V ++ + +T LI AC +L S +L +H ++
Sbjct: 165 VSGFVYNELFEEAVVLFN-QFRKLGMVPNAATVLTLIRACVALESRRLCESIHGMVVKLS 223
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
DV + N +L+MY L+ A F+ M R+V+SWT MI +DA+ L+
Sbjct: 224 LVLDVAVNNSVLDMYSSMLDLDAATRVFEGMECRDVISWTTMINLLVCLEYASDALMLFR 283
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
QM +G+ ++I AC+ LG + GR++H I GS L N++IAMY+K
Sbjct: 284 QMRNTGICNDVVVVMNLISACAILGDLKRGREIHTQAIVCGFGSELPLTNSIIAMYSKCG 343
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ +R VF K + SW +MI + GY EAL +M ++ + + V
Sbjct: 344 DLDSSRTVFDQTTGKSLVSWTAMILGCVQNGYPREALKLLIKMRGEESFYLDSIMLIGVL 403
Query: 246 SACSNFA--------------------RILFNEIDSP---------------------DL 264
SA A R++ N + S D+
Sbjct: 404 SASGELALLELCQQLHCYAFESGFPRYRLVQNSLISAYSKCGDVEPAYNVFGQMGYIRDI 463
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
SWNA++ G + + A++L+ EMR PD T +L AC + G+ + +
Sbjct: 464 VSWNAILNGYGINGHGEIAVALYHEMRKGRENPDAATYLCVLSACSHSGLVDDGLVIFNQ 523
Query: 325 II-KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
++ + + C I+ + A+ +A + +W ++++ C H
Sbjct: 524 MVEERTIRPSQDHCGCIVDLLARAGCFSDAREFVSRYMEKMGPNAWRALLSGCQLH 579
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 104/200 (52%), Gaps = 1/200 (0%)
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
L + Q +H+ + S+ + +L+ Y K + NA +F+E+ K D VSW+ +
Sbjct: 5 LAILQLYSIHTSTQRYPHGSDPINYSKLLSCYLKSGDIINAGKLFEEIPKR-DVVSWSIM 63
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
I ++ + LFS+M S + P T V+ + A + + +H I K GL
Sbjct: 64 IHGYNRNGFRRKSMELFSQMRISSLVPTSFTMVGVLVSIAGLGDPVLGQCVHGLILKYGL 123
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
D V+ L++ Y KCG++ + ++F +ENP +VS S+++ G+ +EA+ LF +
Sbjct: 124 DSDFRVVTALLNAYAKCGNVVDSYRVFEQLENPGLVSCSAIVSGFVYNELFEEAVVLFNQ 183
Query: 493 MRSLGVSPNLVTLVGVLTAC 512
R LG+ PN T++ ++ AC
Sbjct: 184 FRKLGMVPNAATVLTLIRAC 203
>gi|297843162|ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 608
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 153/505 (30%), Positives = 252/505 (49%), Gaps = 48/505 (9%)
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
Q DAI++ S + + S+++ C + S G Q HAHV+KS + N
Sbjct: 40 QLTDAIRILNSTHSSEISAKSNLYASLLQTCRKVFSFIHGLQFHAHVVKSGLETDRNVGN 99
Query: 176 ALIAMYTKF-DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
+L+++Y K + + R VF G+ KD SW SM++ + ++AL F EM+ G
Sbjct: 100 SLLSLYFKLGPDMRETRRVFDGMFVKDAISWTSMMSGYVASKEHVKALEVFVEMVSFG-L 158
Query: 235 QPNEFIFGSVFSACSNF----------------------------------------ARI 254
QPN+F S AC AR
Sbjct: 159 QPNKFTLSSAVKACFELGEVRLGRCFHGVVITHGFEWNHVISSTLAYMYGVNKEPVDARR 218
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGRL 313
+F+E+ PD+ W A+++ + + EA+ LF M R + L+PDG T ++L AC
Sbjct: 219 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 278
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
L QG ++H +I G SNV V +++L MY K + A VF + + + VSW++++
Sbjct: 279 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKSGSVREARQVFNGMPRK-NIVSWSALL 337
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
Q+ + E+ +F M + D F V+ ACA +A++ + ++H + G
Sbjct: 338 GGYCQNGEHEKAIEMFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCF 393
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
+V V + L+D+Y K G + A ++++ M ++++W++++ AQ G G+EA+ F M
Sbjct: 394 GNVIVESALIDLYGKSGCIDYASRVYSKMSVRNMITWNAMLSALAQNGRGEEAVSFFNDM 453
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
G+ P+ ++ + VLTAC H GLVEEG + + +M YGI P EH SC++DLL RAG
Sbjct: 454 VKKGIKPDYISFIAVLTACGHTGLVEEGRNYFALMAKSYGIKPGTEHYSCMIDLLGRAGL 513
Query: 554 VHEAEDFINQMACDADIVVWKSLLA 578
EAE+ +++ C D +W LL
Sbjct: 514 FEEAENLLDRAECRNDASLWGVLLG 538
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 244/513 (47%), Gaps = 54/513 (10%)
Query: 9 LCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQP 68
LCK +A+ + S +++ I + + YA L+ C + S G + H H++ S +
Sbjct: 35 LCKLGQLTDAIRILN-STHSSEISAKSNLYASLLQTCRKVFSFIHGLQFHAHVVKSGLET 93
Query: 69 DVVLQNHILNMYGKCG-SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
D + N +L++Y K G + + R FD M ++ +SWT+M++G + + A++++++M
Sbjct: 94 DRNVGNSLLSLYFKLGPDMRETRRVFDGMFVKDAISWTSMMSGYVASKEHVKALEVFVEM 153
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG---SHLIAQNALIAMYTKF 184
+ G+ P +FT S +KAC LG V LGR H VI HG +H+I+ + L MY
Sbjct: 154 VSFGLQPNKFTLSSAVKACFELGEVRLGRCFHGVVIT--HGFEWNHVIS-STLAYMYGVN 210
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+DAR VF + DV W ++++AFSK EAL F M P+ FG+V
Sbjct: 211 KEPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTV 270
Query: 245 FSACSNF----------------------------------------ARILFNEIDSPDL 264
+AC N AR +FN + ++
Sbjct: 271 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKSGSVREARQVFNGMPRKNI 330
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
SW+AL+ G + +A+ +F EM +++L G ++L AC G + G ++H
Sbjct: 331 VSWSALLGGYCQNGEHEKAIEMFREMEEKDLYCFG----TVLKACAGLAAVRLGKEIHGQ 386
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
++ G NV V +A++ +Y K + A V+ ++ + ++WN++++A Q+ + EE
Sbjct: 387 YVRRGCFGNVIVESALIDLYGKSGCIDYASRVYSKMSVR-NMITWNAMLSALAQNGRGEE 445
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLM 443
F+ M+ IKPD+I+F V+ AC +E + K+ G+ + ++
Sbjct: 446 AVSFFNDMVKKGIKPDYISFIAVLTACGHTGLVEEGRNYFALMAKSYGIKPGTEHYSCMI 505
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
D+ + G A L + E + S ++LG
Sbjct: 506 DLLGRAGLFEEAENLLDRAECRNDASLWGVLLG 538
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 152/245 (62%), Gaps = 5/245 (2%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S+ K +LY EAL + + ST+ +++AC +LR L+ G+++H ++ +
Sbjct: 235 LSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNG 294
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+VV+++ +L+MYGK GS+ +AR F+ MP++N+VSW+A++ G QN + AI+++
Sbjct: 295 IGSNVVVESSLLDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFR 354
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + + + FG+++KAC+GL +V LG+++H ++ ++I ++ALI +Y K
Sbjct: 355 EMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSG 410
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I A V+S ++ +++ +W +M++A ++ G EA+ FN+M+ G +P+ F +V
Sbjct: 411 CIDYASRVYSKMSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG-IKPDYISFIAVL 469
Query: 246 SACSN 250
+AC +
Sbjct: 470 TACGH 474
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 198/409 (48%), Gaps = 52/409 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T + + AC L ++LGR H ++ + + V+ + + MYG DAR FD+M
Sbjct: 164 TLSSAVKACFELGEVRLGRCFHGVVITHGFEWNHVISSTLAYMYGVNKEPVDARRVFDEM 223
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVCLG 155
P+ +V+ WTA+++ S+N +A+ L+ M + G++P TFG+++ AC L + G
Sbjct: 224 PEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQG 283
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+++H +I + GS+++ +++L+ MY K + +AR VF+G+ RK++ SW +++ + +
Sbjct: 284 KEIHGKLITNGIGSNVVVESSLLDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYCQN 343
Query: 216 GYELEALCHFNEMLH-------------------------HGAYQPNEFIFGSVF----- 245
G +A+ F EM HG Y FG+V
Sbjct: 344 GEHEKAIEMFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQY-VRRGCFGNVIVESAL 402
Query: 246 ------SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
S C ++A +++++ ++ +WNA+++ +A + EA+S F++M + + PD
Sbjct: 403 IDLYGKSGCIDYASRVYSKMSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDY 462
Query: 300 LTVHSLLCACIGRLTL------YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
++ ++L AC G L Y + SY IK G + + ++ + + + A
Sbjct: 463 ISFIAVLTAC-GHTGLVEEGRNYFALMAKSYGIKPGTEH----YSCMIDLLGRAGLFEEA 517
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELF-RLFSRMLASQIKPDH 401
+ D+ W ++ C + A + R+ RM+ +++P +
Sbjct: 518 ENLLDRAECRNDASLWGVLLGPCAANTDASSIAERIAKRMM--ELEPKY 564
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 160/552 (28%), Positives = 273/552 (49%), Gaps = 52/552 (9%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
N+ R +Y +IS L R + D + + D+ N +L Y + L
Sbjct: 70 NSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKM----PERDLFSWNVMLTGYVRNRRLG 125
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
+A FD MP+++VVSW AM++G +QN ++A +++ +M ++ ++ A
Sbjct: 126 EAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRN----SISWNGLLAAYV 181
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
G + R+L +S+ LI+ N L+ Y K + + DAR +F + +DV SW +
Sbjct: 182 HNGRLKEARRL----FESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNT 237
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASW 267
MI+ ++++G +L A+ LFNE D+ +W
Sbjct: 238 MISGYAQVG-DLSQ------------------------------AKRLFNESPIRDVFTW 266
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
A+++G + +EA F EM + + ++ +++L + Y+ M + + +
Sbjct: 267 TAMVSGYVQNGMVDEARKYFDEM----PVKNEISYNAMLAGYV----QYKKMVIAGELFE 318
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
N+ N ++T Y + + A +F ++ D VSW +II+ Q+ EE
Sbjct: 319 AMPCRNISSWNTMITGYGQNGGIAQARKLF-DMMPQRDCVSWAAIISGYAQNGHYEEALN 377
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
+F M + TF+ + CA +A+LE+ Q+H + K G FV N L+ +Y
Sbjct: 378 MFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYF 437
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
KCGS A +F +E DVVSW+++I GYA+ G G +AL LF M+ GV P+ +T+VG
Sbjct: 438 KCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVG 497
Query: 508 VLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
VL+ACSH GL++ G + M+ +Y + PT +H +C++DLL RAG + EAE+ + M D
Sbjct: 498 VLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFD 557
Query: 568 ADIVVWKSLLAS 579
W +LL +
Sbjct: 558 PGAASWGALLGA 569
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 130/293 (44%), Gaps = 48/293 (16%)
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEID 260
D+ +W I++ + G+ AL FN M + N I G + +A + AR LF+++
Sbjct: 45 DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP 104
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
DL SWN ++ G + EA LF +L+P
Sbjct: 105 ERDLFSWNVMLTGYVRNRRLGEAHKLF------DLMP----------------------- 135
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+V NA+L+ YA+ + A VF ++ + +S+SWN ++AA + +
Sbjct: 136 ----------KKDVVSWNAMLSGYAQNGFVDEAREVFNKM-PHRNSISWNGLLAAYVHNG 184
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
+ +E RLF SQ + I++N +MG K L QL + DV N
Sbjct: 185 RLKEARRLFE----SQSNWELISWNCLMGGYVKRNMLGDARQLFDRMP----VRDVISWN 236
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
++ Y + G L A++LFN DV +W++++ GY Q G DEA K F M
Sbjct: 237 TMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEM 289
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 108/217 (49%), Gaps = 18/217 (8%)
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
K+ D V+WN I++ +++ + R+F+ M + +++N ++ + A +
Sbjct: 42 KDPDIVTWNKAISSHMRNGHCDSALRVFNSM----PRRSSVSYNAMISGYLRNAKFSLAR 97
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
L + + D+F N ++ Y++ LG A KLF+ M DVVSW++++ GYAQ G
Sbjct: 98 DLFDKMPER----DLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNG 153
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC 541
DEA ++F +M N ++ G+L A H G ++E L+ N + +I
Sbjct: 154 FVDEAREVFNKM----PHRNSISWNGLLAAYVHNGRLKEARRLFESQSN-WELIS----W 204
Query: 542 SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+C++ + + +A ++M D++ W ++++
Sbjct: 205 NCLMGGYVKRNMLGDARQLFDRMPV-RDVISWNTMIS 240
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 110/209 (52%), Gaps = 5/209 (2%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + Y EAL + + + R ST++ +S C+ + +L+LG++VH ++ +
Sbjct: 363 ISGYAQNGHYEEALNMFVEMKRDGESSNR-STFSCALSTCADIAALELGKQVHGQVVKAG 421
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ + N +L MY KCGS ++A F+ + +++VVSW MIAG +++ A+ L+
Sbjct: 422 FETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFE 481
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTK 183
M ++GV P + T ++ ACS G + G + + + + ++ +++ +I + +
Sbjct: 482 SMKKAGVKPDEITMVGVLSACSHSGLIDRGTE-YFYSMDRDYNVKPTSKHYTCMIDLLGR 540
Query: 184 FDRILDARNVFSGIA-RKDVTSWGSMIAA 211
R+ +A N+ + SWG+++ A
Sbjct: 541 AGRLEEAENLMRNMPFDPGAASWGALLGA 569
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 158/522 (30%), Positives = 250/522 (47%), Gaps = 47/522 (9%)
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
+V +W I +++ L+ +M + G P FTF + KAC+ L V +H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
AH+IKS S + A + M+ K + + A VF + +D T+W +M++ F + G+
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 220 EALCHFNEM---------------LHHGAYQP------------------------NEFI 240
+A F EM + +++ N +I
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 241 FGSVFSACSNF--ARILFNEIDSPD--LASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
S + C + A+++F ID D + SWN++ + A +A L+ M E
Sbjct: 196 --STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFK 253
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD T +L +C TL QG +HS+ I +G D ++ N ++MY+K C+A L+
Sbjct: 254 PDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLL 313
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F ++ + VSW +I+ + +E LF M+ S KPD +T ++ C K S
Sbjct: 314 F-DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGS 372
Query: 417 LEMVTQLHCYITKTGLAFD-VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
LE + G D V + N L+D+Y KCGS+ AR +F+ VV+W+++I
Sbjct: 373 LETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIA 432
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
GYA G EALKLF++M L PN +T + VL AC+H G +E+G + IM+ Y I
Sbjct: 433 GYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNIS 492
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
P +H SC+VDLL R G + EA + I M+ D +W +LL
Sbjct: 493 PGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALL 534
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 219/484 (45%), Gaps = 49/484 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ + AC+ L + VH H++ S DV + ++M+ KC S++ A F++M
Sbjct: 54 TFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERM 113
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+R+ +W AM++G Q+ + A L+ +M + + P T ++I++ S S+ L
Sbjct: 114 PERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLE 173
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD--VTSWGSMIAAFSK 214
+HA I+ + N I+ Y K + A+ VF I R D V SW SM A+S
Sbjct: 174 AMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSV 233
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------------ 250
G +A + ML ++P+ F ++ ++C N
Sbjct: 234 FGEAFDAFGLYCLMLRE-EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIE 292
Query: 251 ----------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
AR+LF+ + S SW +I+G A + +EA++LF M
Sbjct: 293 AINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSG 352
Query: 295 LLPDGLTVHSLLCAC--IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
PD +T+ SL+ C G L + + + I D NV +CNA++ MY+KC +
Sbjct: 353 EKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRD-NVMICNALIDMYSKCGSIHE 411
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A +F + V+W ++IA + E +LFS+M+ KP+HITF V+ ACA
Sbjct: 412 ARDIFDNTPEKT-VVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACA 470
Query: 413 KMASLEMVTQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF-NFMENPDVVSW 470
SLE + H ++ + + ++D+ + G L A +L N PD W
Sbjct: 471 HSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIW 530
Query: 471 SSLI 474
+L+
Sbjct: 531 GALL 534
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 140/285 (49%), Gaps = 15/285 (5%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
ST+ L ++C + +L GR +H H + D+ N ++MY K AR+ FD
Sbjct: 257 STFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDI 316
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M R VSWT MI+G ++ ++A+ L+ M++SG P T S+I C GS+ G
Sbjct: 317 MTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG 376
Query: 156 RQLHAHV-IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
+ + A I +++ NALI MY+K I +AR++F K V +W +MIA ++
Sbjct: 377 KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYAL 436
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------LFNEID--SPDL 264
G LEAL F++M+ Y+PN F +V AC++ + + ++ SP L
Sbjct: 437 NGIFLEALKLFSKMIDLD-YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGL 495
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
++ ++ + EA+ L M + PD +LL AC
Sbjct: 496 DHYSCMVDLLGRKGKLEEALELIRNMSAK---PDAGIWGALLNAC 537
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 190/453 (41%), Gaps = 65/453 (14%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N +S C+ ++A + + N I P T LI + S +SL+L +H
Sbjct: 122 NAMLSGFCQSGHTDKAFSLFREMRLN---EITPDSVTVMTLIQSASFEKSLKLLEAMHAV 178
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ--RNVVSWTAMIAGCSQNYQEN 118
+ V + N ++ YGKCG L+ A++ F+ + + R VVSW +M S +
Sbjct: 179 GIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAF 238
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
DA LY ML+ P TF ++ +C ++ GR +H+H I + A N I
Sbjct: 239 DAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFI 298
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
+MY+K + AR +F + + SW MI+ +++ G EAL F+ M+ G +P+
Sbjct: 299 SMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGE-KPDL 357
Query: 239 FIFGSVFSACSNF-----------------------------------------ARILFN 257
S+ S C F AR +F+
Sbjct: 358 VTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFD 417
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
+ +W +IAG A + EA+ LFS+M D + P+ +T ++L AC +L +
Sbjct: 418 NTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEK 477
Query: 318 GMQV-----HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
G + Y I G D + ++ + + L AL + + + D+ W ++
Sbjct: 478 GWEYFHIMKQVYNISPGLDH----YSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGAL 533
Query: 373 IAACLQHNQ-------AEELFRLFSRMLASQIK 398
+ AC H AE LF L +M A ++
Sbjct: 534 LNACKIHRNVKIAEQAAESLFNLEPQMAAPYVE 566
>gi|125543615|gb|EAY89754.1| hypothetical protein OsI_11297 [Oryza sativa Indica Group]
Length = 648
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 157/492 (31%), Positives = 247/492 (50%), Gaps = 38/492 (7%)
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ LY M P +T + AC+ ++ GRQ+H H ++ G +L NAL++M
Sbjct: 91 LPLYASM---SAAPDCYTHTILAAACATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSM 147
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y+ + DAR VF D SW +++AA+ + +A+ F M GA + +
Sbjct: 148 YSACGCLGDARKVFDAGPVWDAVSWNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMV 207
Query: 241 --FGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
FG + AR +F+ ++ D+ +W A+I+ + EA++LFS+MR D
Sbjct: 208 SLFGR--RGMVDEARKVFDGVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVD 265
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF- 357
+ ++ AC G H + G S + V NA++ MY+ + A +F
Sbjct: 266 EAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFD 325
Query: 358 --------------------------KEL---GKNADSVSWNSIIAACLQHNQAEELFRL 388
KEL + D+VSW ++I+ C+Q++Q+ E +
Sbjct: 326 SGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTI 385
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
F+ M A IKPD +T V+ AC M+SLE +H YI + V + L+D+Y+K
Sbjct: 386 FNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMK 445
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV-SPNLVTLVG 507
CG L SA ++F+ ME W+++I+G A G ++L +F+ M S +PN +T G
Sbjct: 446 CGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTG 505
Query: 508 VLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
VL+AC H GLVEEG H +++M+++Y IIP H C+VDLL RAG V EAE+ I M
Sbjct: 506 VLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMS 565
Query: 568 ADIVVWKSLLAS 579
D+ W +LL S
Sbjct: 566 PDVPAWGALLGS 577
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/512 (23%), Positives = 213/512 (41%), Gaps = 115/512 (22%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L +AC++ R+++ GR+VH H + ++ L N +++MY CG L DAR FD
Sbjct: 105 THTILAAACATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAG 164
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P + VSW ++A Q + A+ ++ +M + G
Sbjct: 165 PVWDAVSWNTILAAYVQAEDVDQAVGVFARMPERGA------------------------ 200
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
A +++++++ + + +AR VF G+ RKDV +W +MI+ F + G
Sbjct: 201 ---------------AAVSSMVSLFGRRGMVDEARKVFDGVERKDVFTWTAMISCFQRNG 245
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
EAL F++M G + +E + V +AC+
Sbjct: 246 KFAEALALFSDMRGEG-WPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQ 304
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE-- 294
AR LF+ D SWN++IAG + + +A LF+ M D++
Sbjct: 305 NALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNV 364
Query: 295 -----------------------------LLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
+ PD +T+ S++ AC +L QG +H YI
Sbjct: 365 SWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYI 424
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
+ + V + +++ MY KC L +AL VF + + + WN++I + +
Sbjct: 425 REHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERG-TPCWNAVIVGLAMNGLVMKS 483
Query: 386 FRLFSRMLASQI-KPDHITFNDVMGACAKMASLEMVTQLHCYIT-KTGLAFDVFVMNGLM 443
+FS M +S P+ ITF V+ AC +E + K + ++ ++
Sbjct: 484 LDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMV 543
Query: 444 DIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
D+ + G + A L M +PDV +W +L+
Sbjct: 544 DLLGRAGYVKEAENLIESMPMSPDVPAWGALL 575
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 12/218 (5%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + + +EAL ++ Q I+ T +ISAC+++ SL+ G+ +H++I +
Sbjct: 370 ISGCVQNDQSSEALTIFNNMQAQ-GIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQ 428
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
V+L +++MY KCG LE A FD M +R W A+I G + N ++ ++
Sbjct: 429 YTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFS 488
Query: 126 QMLQSGV-MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK-SEHGSHLIAQ----NALIA 179
+M S P + TF ++ AC G V G+ H K +H H+I ++
Sbjct: 489 EMESSSTATPNEITFTGVLSACRHAGLVEEGQ----HFFKLMQHKYHIIPNIRHYGCMVD 544
Query: 180 MYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLG 216
+ + + +A N+ + DV +WG+++ + K G
Sbjct: 545 LLGRAGYVKEAENLIESMPMSPDVPAWGALLGSCWKHG 582
>gi|297835788|ref|XP_002885776.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331616|gb|EFH62035.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 158/518 (30%), Positives = 256/518 (49%), Gaps = 35/518 (6%)
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MP+R+ V W A+I G S+N E+DA KL+I MLQ G P T +++ C G V G
Sbjct: 1 MPERDTVVWNALICGYSRNGYESDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R +H KS +NALI+ Y+K + A +F + K SW +MI A+S+
Sbjct: 61 RSVHGIAAKSGLEMDSQVKNALISFYSKCAELDSAEVLFREMKDKSTVSWNTMIGAYSQS 120
Query: 216 GYELEALCHFNEMLH----------------HGAYQP-----------NEFIFGS----V 244
G EA+ F M H +++P N+ +
Sbjct: 121 GLMEEAITVFKNMFEKSVEISPVTIINLLSAHVSHEPLHCLVVKSGMVNDISVVTSLVCA 180
Query: 245 FSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
+S C + A L+ + + ++++ A + + A+ FS+MR + D + +
Sbjct: 181 YSRCGYLDSAERLYASANQDSIVGLTSIVSSYAEKGDMDIAVVYFSKMRQLCMKIDAVAL 240
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
+L C + GM +H Y IK G V N ++TMY+K + L +F++L +
Sbjct: 241 VGILHGCKNSSHIDIGMSLHGYAIKSGLCRKTLVVNGLITMYSKFDDVETVLFLFQQL-Q 299
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRM-LASQIKPDHITFNDVMGACAKMASLEMVT 421
+SWNS+I+ C+Q +A F +F +M L+ + PD IT ++ C+++ L +
Sbjct: 300 ETPLISWNSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIASLLAGCSQLCCLNLGK 359
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
+LH Y + + FV L+D+Y KCG+ A +F ++ P +W+S+I GY+ G
Sbjct: 360 ELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSG 419
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC 541
+ AL + MR G+ P+ +T +GVL+AC+H G V+EG +R M E+GI P +H
Sbjct: 420 LQNRALSCYLEMREKGLKPDKITFLGVLSACTHGGFVDEGKIYFRAMIKEFGISPCLQHY 479
Query: 542 SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ +V LL RA EA I +M D VW +LL++
Sbjct: 480 ALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSA 517
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 179/417 (42%), Gaps = 47/417 (11%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T L+ C + GR VH S + D ++N +++ Y KC L+ A + F +
Sbjct: 42 TTLVNLLPFCGQCGFVSQGRSVHGIAAKSGLEMDSQVKNALISFYSKCAELDSAEVLFRE 101
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M ++ VSW MI SQ+ +AI ++ M + V T +++ A
Sbjct: 102 MKDKSTVSWNTMIGAYSQSGLMEEAITVFKNMFEKSVEISPVTIINLLSAHVS------H 155
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
LH V+KS + + +L+ Y++ + A +++ + + S+++++++
Sbjct: 156 EPLHCLVVKSGMVNDISVVTSLVCAYSRCGYLDSAERLYASANQDSIVGLTSIVSSYAEK 215
Query: 216 GYELEALCHFNEM--------------LHHGAYQPNEFIFG------------------- 242
G A+ +F++M + HG + G
Sbjct: 216 GDMDIAVVYFSKMRQLCMKIDAVALVGILHGCKNSSHIDIGMSLHGYAIKSGLCRKTLVV 275
Query: 243 -SVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR-DREL 295
+ + S F + LF ++ L SWN++I+G A+ A +F +M+ L
Sbjct: 276 NGLITMYSKFDDVETVLFLFQQLQETPLISWNSVISGCVQSGRASTAFEVFHQMKLSGGL 335
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
LPD +T+ SLL C L G ++H Y ++ F++ VC A++ MYAKC A
Sbjct: 336 LPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAES 395
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
VFK + K + +WNS+I+ + M +KPD ITF V+ AC
Sbjct: 396 VFKSI-KAPCTATWNSMISGYSLSGLQNRALSCYLEMREKGLKPDKITFLGVLSACT 451
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 172/422 (40%), Gaps = 48/422 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + + + L EA+ + + ++ I P T L+SA S L H ++
Sbjct: 111 NTMIGAYSQSGLMEEAITVFK-NMFEKSVEISPVTIINLLSAHVSHEPL------HCLVV 163
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S D+ + ++ Y +CG L+ A + Q ++V T++++ ++ + A+
Sbjct: 164 KSGMVNDISVVTSLVCAYSRCGYLDSAERLYASANQDSIVGLTSIVSSYAEKGDMDIAVV 223
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ +M Q + I+ C + +G LH + IKS + N LI MY+
Sbjct: 224 YFSKMRQLCMKIDAVALVGILHGCKNSSHIDIGMSLHGYAIKSGLCRKTLVVNGLITMYS 283
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
KFD + +F + + SW S+I+ + G A F++M G P+
Sbjct: 284 KFDDVETVLFLFQQLQETPLISWNSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIA 343
Query: 243 SVFSACS------------------NF----------------------ARILFNEIDSP 262
S+ + CS NF A +F I +P
Sbjct: 344 SLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAP 403
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI-GRLTLYQGMQV 321
A+WN++I+G + N A+S + EMR++ L PD +T +L AC G +
Sbjct: 404 CTATWNSMISGYSLSGLQNRALSCYLEMREKGLKPDKITFLGVLSACTHGGFVDEGKIYF 463
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
+ I + G + ++ + + + AL + ++ DS W ++++AC+ H +
Sbjct: 464 RAMIKEFGISPCLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRE 523
Query: 382 AE 383
E
Sbjct: 524 LE 525
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 146/468 (31%), Positives = 260/468 (55%), Gaps = 18/468 (3%)
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+++ +++ SG+ F ++ S LG +C R+L + + NA+I Y
Sbjct: 74 QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPD----VFMWNAIIRSY 129
Query: 182 TKFDRILDARNVF-----SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
++ + D ++ +G+ T + A L + L + H +++ +G +
Sbjct: 130 SRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIH-GQIIKYG-FGS 187
Query: 237 NEFI---FGSVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
+ F+ ++++ C + A+++F+ + + SW ++I+G A + A EA+ +FS+MR
Sbjct: 188 DVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMR 247
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ + PD + + S+L A L QG +H ++IKMG + + ++ YAKC ++
Sbjct: 248 NNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVT 307
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A F ++ K + + WN++I+ ++ AEE LF M++ IKPD +T + A
Sbjct: 308 VAKSFFDQM-KTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLAS 366
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
A++ SLE+ + Y++K+ D+FV L+D+Y KCGS+ AR++F+ + DVV WS
Sbjct: 367 AQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWS 426
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
++I+GY G G EA+ L+ M+ GV PN VT +G+LTAC+H GLV+EG L+ M+ +
Sbjct: 427 AMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMK-D 485
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ I+P EH SCVVDLL RAG + EA FI ++ + + VW +LL++
Sbjct: 486 FEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSA 533
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 143/523 (27%), Positives = 241/523 (46%), Gaps = 67/523 (12%)
Query: 1 FSNDYVSSLC-KQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHD 59
F +V LC L+ E V +D N+ S YA LI + R L ++H+
Sbjct: 27 FVLKFVKYLCFSSALHPEHFVNHDHCFNSD------SFYASLIDNSTHKRHLD---QIHN 77
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
+++S Q + L ++N G + AR FD+ +V W A+I S+N D
Sbjct: 78 RLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRD 137
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
+++Y M +GV P FTF ++KAC+ L L +H +IK GS + QN L+A
Sbjct: 138 TVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVA 197
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
+Y K I A+ VF G+ + + SW S+I+ +++ G +EAL F++M ++G +P+
Sbjct: 198 LYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGV-KPDWI 256
Query: 240 IFGSVFSACSN----------------------------------------FARILFNEI 259
S+ A ++ A+ F+++
Sbjct: 257 ALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQM 316
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS--LLCACIGRLTLYQ 317
+ ++ WNA+I+G A + +A EA++LF M R + PD +TV S L A +G L L Q
Sbjct: 317 KTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQ 376
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
M Y+ K + S++ V +++ MYAKC + A VF + + D V W+++I
Sbjct: 377 WMD--DYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVF-DRNSDKDVVMWSAMIMGYG 433
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL-HCYITKTGLAFDV 436
H Q E L+ M + + P+ +TF ++ AC ++ +L HC F++
Sbjct: 434 LHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKD-----FEI 488
Query: 437 FVMNG----LMDIYIKCGSLGSA-RKLFNFMENPDVVSWSSLI 474
N ++D+ + G LG A + P V W +L+
Sbjct: 489 VPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALL 531
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 152/328 (46%), Gaps = 35/328 (10%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
EAL + +NN ++P A ++ A + + L+ GR +H ++ + + L
Sbjct: 238 EALRMFSQMRNNG---VKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLI 294
Query: 75 HILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
+ Y KCG + A+ FD+M NV+ W AMI+G ++N +A+ L+ M+ + P
Sbjct: 295 SLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKP 354
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
T S + A + +GS+ L + + +V KS +GS + +LI MY K + AR VF
Sbjct: 355 DSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVF 414
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
+ KDV W +MI + G EA+ ++ M G + PN+ F + +AC++ +
Sbjct: 415 DRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVF-PNDVTFIGLLTACNHSGLV 473
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
E LF M+D E++P +S + +GR
Sbjct: 474 --------------------------KEGWELFHCMKDFEIVPRN-EHYSCVVDLLGRAG 506
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILT 342
Y G + ++I+K+ + V V A+L+
Sbjct: 507 -YLG-EACAFIMKIPIEPGVSVWGALLS 532
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 155/487 (31%), Positives = 242/487 (49%), Gaps = 52/487 (10%)
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF-DRILDARNVFS 195
F + S+++ C+ S G Q H+H IKS + N+L+A+Y K + +AR VF
Sbjct: 61 FFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFD 120
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---- 251
G+ KD+ SW SMI + K+ ++L F EML G +PN F +V ACS
Sbjct: 121 GLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGI-EPNGFTLSAVIKACSGLGDLR 179
Query: 252 ------------------------------------ARILFNEIDSPDLASWNALIAGVA 275
A ++F E+ PD W ++I+
Sbjct: 180 LGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFT 239
Query: 276 SHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCAC--IGRLTLYQGMQVHSYIIKMGFDS 332
+ ++A+ F M R L PDG T ++L AC +GRL QG +VH+ +I G
Sbjct: 240 RNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLK--QGKEVHAKVITSGLSG 297
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
NV V ++++ MY KC ++ + VF + + VSW +++ Q+ E + R+F
Sbjct: 298 NVFVESSLVDMYGKCRLVNQSQCVFDRMSVK-NLVSWTALLGGYCQNGDFESVIRIFRE- 355
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
K D +F V+ ACA +A++ ++HC K DV + L+D+Y KCG +
Sbjct: 356 ---GKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCI 412
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
A ++F M ++++W+S+I G+AQ G G E +LF M G+ P+ ++ VGVL AC
Sbjct: 413 DFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFAC 472
Query: 513 SHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
SH GLV++G + M Y I P EH +C++DLL RAG + EAE+ I C + +
Sbjct: 473 SHAGLVDQGKKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCRDEPSL 532
Query: 573 WKSLLAS 579
W LL +
Sbjct: 533 WTVLLGA 539
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 235/513 (45%), Gaps = 56/513 (10%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
CK EA+ + S + T + +P YA L+ C+ S G + H H + S D
Sbjct: 36 CKSGSLFEAIHVLN-SIDWTRLSNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTD 94
Query: 70 VVLQNHILNMYGKCG-SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
+ N +L +Y K G +L +AR FD + ++++SWT+MI G + + +++L+++ML
Sbjct: 95 RFVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEML 154
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
G+ P FT ++IKACSGLG + LG+ H V+ + + ALI MY + +
Sbjct: 155 GLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVD 214
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
DA VF + + D W S+I+AF++ +AL F M P+ F FG+V +AC
Sbjct: 215 DAILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTAC 274
Query: 249 SNFARI----------------------------------------LFNEIDSPDLASWN 268
N R+ +F+ + +L SW
Sbjct: 275 GNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWT 334
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
AL+ G + + + +F E + D + ++L AC G + QG +VH +K
Sbjct: 335 ALLGGYCQNGDFESVIRIFREGKK----VDTYSFGTVLRACAGLAAVRQGKEVHCQYVKR 390
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
+V +A++ +YAKC + A +F + + ++WNS+I Q+ + E+F+L
Sbjct: 391 CCWRDVVTESALVDLYAKCGCIDFAYRIFVRMSVR-NLITWNSMIYGFAQNGRGGEVFQL 449
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLE-----MVTQLHCYITKTGLAFDVFVMNGLM 443
F M+ I+PD+I+F V+ AC+ ++ Y K G+ N ++
Sbjct: 450 FDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAAMTEVYEIKPGIEH----YNCMI 505
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
D+ + G L A L D S +++LG
Sbjct: 506 DLLGRAGLLEEAENLIENANCRDEPSLWTVLLG 538
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 138/245 (56%), Gaps = 5/245 (2%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S+ + ++Y++AL + + T+ +++AC +L L+ G++VH ++ S
Sbjct: 235 ISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSG 294
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+V +++ +++MYGKC + ++ FD+M +N+VSWTA++ G Y +N + I
Sbjct: 295 LSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGG----YCQNGDFESVI 350
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
++ + G ++FG++++AC+GL +V G+++H +K ++ ++AL+ +Y K
Sbjct: 351 RIFREGKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCG 410
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I A +F ++ +++ +W SMI F++ G E F+EM+ G +P+ F V
Sbjct: 411 CIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGI-RPDYISFVGVL 469
Query: 246 SACSN 250
ACS+
Sbjct: 470 FACSH 474
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 98/182 (53%), Gaps = 2/182 (1%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
++ ++ ++ AC+ L +++ G++VH + C DVV ++ ++++Y KCG ++ A
Sbjct: 358 KVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYR 417
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
F +M RN+++W +MI G +QN + + +L+ +M++ G+ P +F ++ ACS G
Sbjct: 418 IFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGL 477
Query: 152 VCLGRQLHAHVIK-SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS-WGSMI 209
V G++ A + + E + N +I + + + +A N+ +D S W ++
Sbjct: 478 VDQGKKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCRDEPSLWTVLL 537
Query: 210 AA 211
A
Sbjct: 538 GA 539
>gi|359477774|ref|XP_002282129.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 691
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 161/537 (29%), Positives = 263/537 (48%), Gaps = 61/537 (11%)
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
+ G E+A+M FD+MPQRN V++ AMI G QN + + L+ +M + + F++ +
Sbjct: 53 RNGFTEEAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMPERDI----FSYNT 108
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
+I G + + + + +++ N++I+ Y I +A VFSG+ KD
Sbjct: 109 MIAGLMKFGDI----NGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSGMVLKD 164
Query: 202 VTSWG-------------------------------SMIAAFSKLGYELEALCHFNEMLH 230
V SW +MI+ + G +EA F +M
Sbjct: 165 VVSWNLVIAGLVGVGKVDLAEEFFKEMGTRDIASWTTMISGLASAGRIVEARGLFEDMPV 224
Query: 231 HGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
N I G + + C +LF ++ D SWN +I G+ + +AM LF EM
Sbjct: 225 RDVRAWNTMIAGYIENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRNQRIQDAMRLFVEM 284
Query: 291 -----RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
R + GL + L+ + H+++ K F V N I+ Y
Sbjct: 285 PQKCRRSWNSIVFGLIRNGLI------------KEAHAFLEKSPFSDTVSWTNLIVG-YF 331
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
+ + A+ +F EL D+ +WN II +++ EE + F +M PD TF
Sbjct: 332 ETGEVDTAVSIF-ELMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKEGGPFPDEATFT 390
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
V+ C+ + +L + Q+H +TKTG + V V N ++ +Y +CG+ SA LF+ M +
Sbjct: 391 SVLTICSDLPTLHLGRQIHAQVTKTGFNYFVAVSNAMVTLYARCGNSNSALLLFSAMRSH 450
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
D +SW+S+I G A G G EA+++F +MRS+ + PN +T VGVL+ACSH GLV++G + +
Sbjct: 451 DFISWNSIICGLAHNGNGVEAIEVFEKMRSIDIKPNHITFVGVLSACSHAGLVDQGKYYF 510
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV---VWKSLLAS 579
M+ + + PT EH +C+VDLL R G + EA F+ QM + V VW ++L +
Sbjct: 511 DFMKYKCCLEPTIEHYTCIVDLLGRFGLIDEAMSFLRQMEANGVEVPASVWGAVLGA 567
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 142/579 (24%), Positives = 236/579 (40%), Gaps = 124/579 (21%)
Query: 3 NDYVSSLCKQNLYNEALVAYD-FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
N +S + EA + +D Q NT TY +I G + D +
Sbjct: 45 NSRISDCMRNGFTEEAQMLFDEMPQRNT------VTYNAMIRGYFQNGHFGEGVSLFDEM 98
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ D+ N ++ K G + A F KMP R+VVSW +MI+G N +A+
Sbjct: 99 ----PERDIFSYNTMIAGLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEAL 154
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ-NALIAM 180
+++ M+ V+ ++ +I G+G V L + E G+ IA +I+
Sbjct: 155 RVFSGMVLKDVV----SWNLVIAGLVGVGKVDLAEEFF-----KEMGTRDIASWTTMISG 205
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG-YEL-------------------- 219
RI++AR +F + +DV +W +MIA + + G E+
Sbjct: 206 LASAGRIVEARGLFEDMPVRDVRAWNTMIAGYIENGCIEIGEVLFQKMPQRDFRSWNEMI 265
Query: 220 ----------EALCHFNEMLHHGAYQPNEFIFG----------------SVFSACSNFAR 253
+A+ F EM N +FG S FS ++
Sbjct: 266 NGLVRNQRIQDAMRLFVEMPQKCRRSWNSIVFGLIRNGLIKEAHAFLEKSPFSDTVSWTN 325
Query: 254 ILF-----NEIDSP----------DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
++ E+D+ D +WN +I G+ + + E + F +M++ PD
Sbjct: 326 LIVGYFETGEVDTAVSIFELMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKEGGPFPD 385
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
T S+L C TL+ G Q+H+ + K GF+ V V NA++T+YA+C +ALL+F
Sbjct: 386 EATFTSVLTICSDLPTLHLGRQIHAQVTKTGFNYFVAVSNAMVTLYARCGNSNSALLLFS 445
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ ++ D +SWNSII + E +F +M + IKP+HITF V+ AC+
Sbjct: 446 AM-RSHDFISWNSIICGLAHNGNGVEAIEVFEKMRSIDIKPNHITFVGVLSACSHA---- 500
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-----NPDVVSWSSL 473
GL+D + F+FM+ P + ++ +
Sbjct: 501 ----------------------GLVD---------QGKYYFDFMKYKCCLEPTIEHYTCI 529
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
+ +FG DEA+ +M + GV VL AC
Sbjct: 530 VDLLGRFGLIDEAMSFLRQMEANGVEVPASVWGAVLGAC 568
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 171/392 (43%), Gaps = 57/392 (14%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+++ +IS +S + R + + + + DV N ++ Y + G +E + F K
Sbjct: 197 ASWTTMISGLASAGRIVEARGLFEDMPVR----DVRAWNTMIAGYIENGCIEIGEVLFQK 252
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
MPQR+ SW MI G +N + DA++L+++M Q + ++ SI+ GL L
Sbjct: 253 MPQRDFRSWNEMINGLVRNQRIQDAMRLFVEMPQK----CRRSWNSIV---FGLIRNGLI 305
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
++ HA + KS S ++ LI Y + + A ++F + +D T+W +I +
Sbjct: 306 KEAHAFLEKSPF-SDTVSWTNLIVGYFETGEVDTAVSIFELMPARDATAWNVIIWGLGEN 364
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--------------------------- 248
+ E L F +M G + P+E F SV + C
Sbjct: 365 DHGEEGLKFFVKMKEGGPF-PDEATFTSVLTICSDLPTLHLGRQIHAQVTKTGFNYFVAV 423
Query: 249 -------------SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
SN A +LF+ + S D SWN++I G+A + N EA+ +F +MR ++
Sbjct: 424 SNAMVTLYARCGNSNSALLLFSAMRSHDFISWNSIICGLAHNGNGVEAIEVFEKMRSIDI 483
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
P+ +T +L AC + QG ++ K + + I+ + + ++ A+
Sbjct: 484 KPNHITFVGVLSACSHAGLVDQGKYYFDFMKYKCCLEPTIEHYTCIVDLLGRFGLIDEAM 543
Query: 355 LVFKELGKNADSVS---WNSIIAACLQHNQAE 383
+++ N V W +++ AC H +
Sbjct: 544 SFLRQMEANGVEVPASVWGAVLGACRIHKNMQ 575
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 18/274 (6%)
Query: 60 HILLSKCQ-PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
H L K D V +++ Y + G ++ A F+ MP R+ +W +I G +N
Sbjct: 309 HAFLEKSPFSDTVSWTNLIVGYFETGEVDTAVSIFELMPARDATAWNVIIWGLGENDHGE 368
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
+ +K +++M + G P + TF S++ CS L ++ LGRQ+HA V K+ + NA++
Sbjct: 369 EGLKFFVKMKEGGPFPDEATFTSVLTICSDLPTLHLGRQIHAQVTKTGFNYFVAVSNAMV 428
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
+Y + A +FS + D SW S+I + G +EA+ F +M +PN
Sbjct: 429 TLYARCGNSNSALLLFSAMRSHDFISWNSIICGLAHNGNGVEAIEVFEKM-RSIDIKPNH 487
Query: 239 FIFGSVFSACS-----NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLFS 288
F V SACS + + F+ + P + + ++ + +EAMS
Sbjct: 488 ITFVGVLSACSHAGLVDQGKYYFDFMKYKCCLEPTIEHYTCIVDLLGRFGLIDEAMSFL- 546
Query: 289 EMRDRELLPDGLTVH-SLLCACIGRLTLYQGMQV 321
R++ +G+ V S+ A +G +++ MQV
Sbjct: 547 ----RQMEANGVEVPASVWGAVLGACRIHKNMQV 576
>gi|115452665|ref|NP_001049933.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|108707812|gb|ABF95607.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548404|dbj|BAF11847.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|125586044|gb|EAZ26708.1| hypothetical protein OsJ_10614 [Oryza sativa Japonica Group]
Length = 648
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 157/492 (31%), Positives = 247/492 (50%), Gaps = 38/492 (7%)
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ LY M P +T + AC+ ++ GRQ+H H ++ G +L NAL++M
Sbjct: 91 LPLYASM---SAAPDCYTHTILAAACATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSM 147
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y+ + DAR VF D SW +++AA+ + +A+ F M GA + +
Sbjct: 148 YSACGCLGDARKVFDAGPVWDAVSWNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMV 207
Query: 241 --FGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
FG + AR +F+ ++ D+ +W A+I+ + EA++LFS+MR D
Sbjct: 208 SLFGR--RGMVDEARKVFDVVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVD 265
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF- 357
+ ++ AC G H + G S + V NA++ MY+ + A +F
Sbjct: 266 EAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFD 325
Query: 358 --------------------------KEL---GKNADSVSWNSIIAACLQHNQAEELFRL 388
KEL + D+VSW ++I+ C+Q++Q+ E +
Sbjct: 326 SGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTI 385
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
F+ M A IKPD +T V+ AC M+SLE +H YI + V + L+D+Y+K
Sbjct: 386 FNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMK 445
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV-SPNLVTLVG 507
CG L SA ++F+ ME W+++I+G A G ++L +F+ M S +PN +T G
Sbjct: 446 CGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTG 505
Query: 508 VLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
VL+AC H GLVEEG H +++M+++Y IIP H C+VDLL RAG V EAE+ I M
Sbjct: 506 VLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMS 565
Query: 568 ADIVVWKSLLAS 579
D+ W +LL S
Sbjct: 566 PDVPAWGALLGS 577
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 119/512 (23%), Positives = 212/512 (41%), Gaps = 115/512 (22%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L +AC++ R+++ GR+VH H + ++ L N +++MY CG L DAR FD
Sbjct: 105 THTILAAACATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAG 164
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P + VSW ++A Q + A+ ++ +M + G
Sbjct: 165 PVWDAVSWNTILAAYVQAEDVDQAVGVFARMPERGA------------------------ 200
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
A +++++++ + + +AR VF + RKDV +W +MI+ F + G
Sbjct: 201 ---------------AAVSSMVSLFGRRGMVDEARKVFDVVERKDVFTWTAMISCFQRNG 245
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
EAL F++M G + +E + V +AC+
Sbjct: 246 KFAEALALFSDMRGEG-WPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQ 304
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE-- 294
AR LF+ D SWN++IAG + + +A LF+ M D++
Sbjct: 305 NALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNV 364
Query: 295 -----------------------------LLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
+ PD +T+ S++ AC +L QG +H YI
Sbjct: 365 SWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYI 424
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
+ + V + +++ MY KC L +AL VF + + + WN++I + +
Sbjct: 425 REHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERG-TPCWNAVIVGLAMNGLVMKS 483
Query: 386 FRLFSRMLASQI-KPDHITFNDVMGACAKMASLEMVTQLHCYIT-KTGLAFDVFVMNGLM 443
+FS M +S P+ ITF V+ AC +E + K + ++ ++
Sbjct: 484 LDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMV 543
Query: 444 DIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
D+ + G + A L M +PDV +W +L+
Sbjct: 544 DLLGRAGYVKEAENLIESMPMSPDVPAWGALL 575
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 12/218 (5%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + + +EAL ++ Q I+ T +ISAC+++ SL+ G+ +H++I +
Sbjct: 370 ISGCVQNDQSSEALTIFNNMQAQ-GIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQ 428
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
V+L +++MY KCG LE A FD M +R W A+I G + N ++ ++
Sbjct: 429 YTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFS 488
Query: 126 QMLQSGV-MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK-SEHGSHLIAQ----NALIA 179
+M S P + TF ++ AC G V G+ H K +H H+I ++
Sbjct: 489 EMESSSTATPNEITFTGVLSACRHAGLVEEGQ----HFFKLMQHKYHIIPNIRHYGCMVD 544
Query: 180 MYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLG 216
+ + + +A N+ + DV +WG+++ + K G
Sbjct: 545 LLGRAGYVKEAENLIESMPMSPDVPAWGALLGSCWKHG 582
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 148/481 (30%), Positives = 247/481 (51%), Gaps = 47/481 (9%)
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL-IAQNALIAMYTKFDRILDARNVFSGI 197
+ S+I C+ S+ + LH H++KS GS + LI Y K I +AR +F +
Sbjct: 4 YTSLIAQCTNKKSLTTLKSLHTHILKS--GSLFSFFGHKLIDGYIKCSVITEARKLFDEM 61
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------ 251
+ + +W SMI++ G EA+ ++ ML G P+ + F ++F A S
Sbjct: 62 PNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVL-PDAYTFSAIFKAFSEMGVSREG 120
Query: 252 -----------------------------------ARILFNEIDSPDLASWNALIAGVAS 276
AR +F+ + D+ + ALI G
Sbjct: 121 QKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQ 180
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
H EA+ +F +M + P+ T+ S+L +C L G +H ++K G +S V
Sbjct: 181 HGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVAS 240
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
++LTMY+KC+++ +++ VF L A V+W S I +Q+ + E +F M+
Sbjct: 241 QTSLLTMYSKCNMVEDSIKVFNSLAY-ASHVTWTSFIVGLVQNGREEVALSMFREMMRCS 299
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
I P+H T + ++ AC+ +A LE Q+H K G+ + FV L+ +Y KCG++ AR
Sbjct: 300 ISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKAR 359
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
+F+ + D+VS +++I YAQ G G EAL+LF R++ LG+ PN+VT + +L AC++ G
Sbjct: 360 SVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAG 419
Query: 517 LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
LVEEG ++ ++ N + I TR+H +C++DLL RA EA I + + D++ W++L
Sbjct: 420 LVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEE-GKNPDVIQWRTL 478
Query: 577 L 577
L
Sbjct: 479 L 479
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 140/501 (27%), Positives = 231/501 (46%), Gaps = 51/501 (10%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y LI+ C++ +SL + +H HIL S + +++ Y KC + +AR FD+MP
Sbjct: 4 YTSLIAQCTNKKSLTTLKSLHTHILKSGSLFSF-FGHKLIDGYIKCSVITEARKLFDEMP 62
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
R++V+W +MI+ + +AI+LY ML GV+P +TF +I KA S +G G++
Sbjct: 63 NRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122
Query: 158 LH--AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
H A V+ E +A ++ MY KF ++ DAR VF + KDV + ++I +++
Sbjct: 123 AHGLAVVLGFEVSDGFVA-TGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQH 181
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------------------- 254
G + EAL F +M+ +PNE+ SV +C N +
Sbjct: 182 GLDGEALEVFEDMV-GSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVAS 240
Query: 255 -------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+FN + +W + I G+ + A+S+F EM +
Sbjct: 241 QTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSI 300
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ T+ S+L AC L G Q+H+ +K+G D N V A++ +Y KC + A
Sbjct: 301 SPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARS 360
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF L + D VS N++I A Q+ E LF R+ ++P+ +TF ++ AC
Sbjct: 361 VFDSLTE-LDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAG 419
Query: 416 SLEMVTQLHCYITKT---GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+E Q+ I L D + ++D+ + A L +NPDV+ W +
Sbjct: 420 LVEEGCQIFSLIRNNHSIELTRDHYTC--MIDLLGRAKRFEEATMLIEEGKNPDVIQWRT 477
Query: 473 LILGYAQFGCGDEALKLFTRM 493
L+ G + A K +M
Sbjct: 478 LLNACKIHGEVEMAEKFMKKM 498
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 197/425 (46%), Gaps = 54/425 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHD-HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
T++ + A S + + G+K H ++L D + I++MY K G ++DAR FD+
Sbjct: 103 TFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDR 162
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ ++VV +TA+I G +Q+ + +A++++ M+ S + P ++T S++ +C LG + G
Sbjct: 163 VLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNG 222
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ +H V+K S + +Q +L+ MY+K + + D+ VF+ +A +W S I +
Sbjct: 223 KLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQN 282
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G E AL F EM+ + PN F S+ ACS+
Sbjct: 283 GREEVALSMFREMM-RCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFV 341
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR +F+ + D+ S N +I A + +EA+ LF ++ L
Sbjct: 342 DAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGL 401
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYI-----IKMGFDSNVPVCNAILTMYAKCSVL 350
P+ +T S+L AC + +G Q+ S I I++ D ++ + +
Sbjct: 402 EPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDH----YTCMIDLLGRAKRF 457
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML--ASQIKPDHITFNDVM 408
A ++ +E GKN D + W +++ AC H + E + +ML A + HI ++
Sbjct: 458 EEATMLIEE-GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIY 516
Query: 409 GACAK 413
+ K
Sbjct: 517 ASAGK 521
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 147/311 (47%), Gaps = 20/311 (6%)
Query: 11 KQNLYNEALVAYDFSQNNTNIRIRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQP 68
+ L EAL + ++ RI+P+ Y A ++ +C +L L G+ +H ++ +
Sbjct: 180 QHGLDGEALEVF---EDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLES 236
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
V Q +L MY KC +ED+ F+ + + V+WT+ I G QN +E A+ ++ +M+
Sbjct: 237 VVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMM 296
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
+ + P FT SI+ ACS L + G Q+HA +K + ALI +Y K +
Sbjct: 297 RCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVE 356
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
AR+VF + D+ S +MI A+++ G+ EAL F E L +PN F S+ AC
Sbjct: 357 KARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELF-ERLKKLGLEPNVVTFISILLAC 415
Query: 249 SN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
+N F+ I N + +I + EA L E ++ PD
Sbjct: 416 NNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKN----PD 471
Query: 299 GLTVHSLLCAC 309
+ +LL AC
Sbjct: 472 VIQWRTLLNAC 482
>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 606
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 148/447 (33%), Positives = 227/447 (50%), Gaps = 49/447 (10%)
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
LI Y +A +F + +DV +W SMI ++ + A F ML G +P
Sbjct: 47 LIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGV-KP 105
Query: 237 NEFIFGSVFSACSNF------------------------------------------ARI 254
N F +V AC + AR+
Sbjct: 106 NAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARL 165
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM--RDRELLPDGLTVHSLLCACIGR 312
+F +I + + SW LI G +A + +F +M + EL P ++ CA IG
Sbjct: 166 VFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGS 225
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
L G QVH+ +I GF+SN+PV NAIL MY +C A +F E+ + D+++WN++
Sbjct: 226 SNL--GKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQK-DTITWNTL 282
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
IA + E L +FS+M++ P+ TF V+ ACA +A L QLH I GL
Sbjct: 283 IAGFETLDSYESLC-IFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGL 341
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
++ + N L+D+Y KCG++ + K+F+ M + ++VSW+S+++GY G G EA+ LF
Sbjct: 342 DNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNE 401
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAG 552
M G+ P+ + + VL+ACSH GLV+EGL +R+M + Y + P R+ +CVVDLL+RAG
Sbjct: 402 MVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSRAG 461
Query: 553 CVHEAEDFINQMACDADIVVWKSLLAS 579
V EA + I M D +W +LL +
Sbjct: 462 RVKEAYELIENMPFKPDESIWVALLGA 488
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/475 (28%), Positives = 221/475 (46%), Gaps = 51/475 (10%)
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
L ++ Y GS E+A FD+MP R+V++WT+MI G + + A ++ ML+ G
Sbjct: 43 LTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDG 102
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK-SEHGSHLIAQNALIAMY-TKFDRILD 189
V P FT +++KAC L ++ G+ +H IK GS + NAL+ MY T D + +
Sbjct: 103 VKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDN 162
Query: 190 ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM-LHHGAYQPNEFIFGSVFSAC 248
AR VF I K+ SW ++I ++ L F +M + G P F F SAC
Sbjct: 163 ARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSP--FSFSIAVSAC 220
Query: 249 SNF----------------------------------------ARILFNEIDSPDLASWN 268
++ A+ LF E+ D +WN
Sbjct: 221 ASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWN 280
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
LIAG + ++ E++ +FS+M P+ T S++ AC LY G Q+H II
Sbjct: 281 TLIAGFET-LDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHR 339
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
G D+N+ + NA++ MYAKC + ++ +F + ++ + VSW S++ H +E L
Sbjct: 340 GLDNNLELSNALIDMYAKCGNVADSHKIFSGM-RHTNLVSWTSMMIGYGAHGHGKEAVDL 398
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
F+ M+ S IKPD I F V+ AC+ + E + + +A D + ++D+
Sbjct: 399 FNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLS 458
Query: 448 KCGSLGSARKLFNFME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
+ G + A +L M PD W +L+ ++ +++ ++ L + PN
Sbjct: 459 RAGRVKEAYELIENMPFKPDESIWVALLGACKKY--KQPSIQKLAALKVLEMKPN 511
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 193/408 (47%), Gaps = 51/408 (12%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHD-HILLSKCQPDVVLQNHIL 77
A++ N ++P+ T + ++ AC SL++L G+ VH I + + + N ++
Sbjct: 91 AWNVFTNMLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALM 150
Query: 78 NMYGKC-GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
+MY C S+++AR+ F+ + +N VSWT +I G + ++++ QM
Sbjct: 151 DMYATCCDSMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSP 210
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG 196
F+F + AC+ +GS LG+Q+HA VI S+L NA++ MY + +A+ +F
Sbjct: 211 FSFSIAVSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGE 270
Query: 197 IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-- 254
+ +KD +W ++IA F L E+LC F++M+ G + PN F F SV +AC+N A +
Sbjct: 271 MTQKDTITWNTLIAGFETLD-SYESLCIFSQMVSEG-FSPNCFTFTSVIAACANLAILYC 328
Query: 255 --------------------------------------LFNEIDSPDLASWNALIAGVAS 276
+F+ + +L SW +++ G +
Sbjct: 329 GQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGA 388
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII---KMGFDSN 333
H + EA+ LF+EM + PD + ++L AC + +G++ + + D +
Sbjct: 389 HGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRD 448
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
+ C ++ + ++ + A + + + D W +++ AC ++ Q
Sbjct: 449 IYAC--VVDLLSRAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQ 494
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
TGL D L+ Y GS A LF+ M + DV++W+S+I GY A +
Sbjct: 41 TGLTTD------LIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNV 94
Query: 490 FTRMRSLGVSPNLVTLVGVLTAC 512
FT M GV PN T+ VL AC
Sbjct: 95 FTNMLRDGVKPNAFTVSAVLKAC 117
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 236/465 (50%), Gaps = 41/465 (8%)
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+QLHA +I + + N L+ MY+K + A +F + ++++ SW +MI+ S+
Sbjct: 24 GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ 83
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------------- 254
EA+ F M G P +F F S AC++ I
Sbjct: 84 NSKFSEAIRTFCGMRICGEV-PTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELF 142
Query: 255 --------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+F E+ D SW A+I G + EA+ F +M D E
Sbjct: 143 VGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEE 202
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ D + S L AC G VHS ++K+GF+S++ V NA+ MY+K + +A
Sbjct: 203 VTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESAS 262
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
VF + + VS+ +I ++ Q E+ +F + I+P+ TF+ ++ ACA
Sbjct: 263 NVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQ 322
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
A+LE TQLH + K D FV + L+D+Y KCG L A + F+ + +P ++W+SL+
Sbjct: 323 AALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLV 382
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
+ Q G G +A+K+F RM GV PN +T + +LT CSH GLVEEGL + M+ YG+
Sbjct: 383 SVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGV 442
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+P EH SCV+DLL RAG + EA++FIN+M + + W S L +
Sbjct: 443 VPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGA 487
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/479 (30%), Positives = 240/479 (50%), Gaps = 45/479 (9%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A +I + + L+ G+++H ++ + P L NH++NMY KCG L+ A FD MPQ
Sbjct: 9 AHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ 68
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
RN+VSWTAMI+G SQN + ++AI+ + M G +P QF F S I+AC+ LGS+ +G+Q+
Sbjct: 69 RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 128
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H +K GS L + L MY+K + DA VF + KD SW +MI +SK+G
Sbjct: 129 HCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEF 188
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFNE--------------- 258
EAL F +M+ ++ + S AC F R + +
Sbjct: 189 EEALLAFKKMIDE-EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNA 247
Query: 259 -------------------IDSP--DLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
IDS ++ S+ LI G + +S+F E+R + + P
Sbjct: 248 LTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEP 307
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+ T SL+ AC + L QG Q+H+ ++K+ FD + V + ++ MY KC +L A+ F
Sbjct: 308 NEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAF 367
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
E+G + ++WNS+++ QH ++ ++F RM+ +KP+ ITF ++ C+ +
Sbjct: 368 DEIG-DPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLV 426
Query: 418 EMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
E + KT G+ + ++D+ + G L A++ N M P+ W S +
Sbjct: 427 EEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 485
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 190/426 (44%), Gaps = 56/426 (13%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRI---RPSTYA--GLISACSSLRSLQLGRKVHDH 60
+S L + + ++EA+ + +RI P+ +A I AC+SL S+++G+++H
Sbjct: 78 ISGLSQNSKFSEAIRTF------CGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCL 131
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
L ++ + +++ +MY KCG++ DA F++MP ++ VSWTAMI G S+ + +A
Sbjct: 132 ALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEA 191
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ + +M+ V Q S + AC L + GR +H+ V+K S + NAL M
Sbjct: 192 LLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDM 251
Query: 181 YTKFDRILDARNVFSGIAR--KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
Y+K + A NVF GI ++V S+ +I + + + L F E+ G +PNE
Sbjct: 252 YSKAGDMESASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG-IEPNE 309
Query: 239 FIFGSVFSACSNFARI----------------------------------------LFNE 258
F F S+ AC+N A + F+E
Sbjct: 310 FTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDE 369
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
I P +WN+L++ H +A+ +F M DR + P+ +T SLL C + +G
Sbjct: 370 IGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEG 429
Query: 319 MQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
+ +S G + ++ + + L A + ++ W S + AC
Sbjct: 430 LDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACR 489
Query: 378 QHNQAE 383
H E
Sbjct: 490 IHGDKE 495
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 109/198 (55%), Gaps = 1/198 (0%)
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
L +G Q+H+ +I G+ + N ++ MY+KC L +AL +F + + + VSW ++I+
Sbjct: 21 LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQR-NLVSWTAMIS 79
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
Q+++ E R F M P F+ + ACA + S+EM Q+HC K G+
Sbjct: 80 GLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGS 139
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
++FV + L D+Y KCG++ A K+F M D VSW+++I GY++ G +EAL F +M
Sbjct: 140 ELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMI 199
Query: 495 SLGVSPNLVTLVGVLTAC 512
V+ + L L AC
Sbjct: 200 DEEVTIDQHVLCSTLGAC 217
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 2/171 (1%)
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
V+ AK L QLH + G F+ N L+++Y KCG L A KLF+ M +
Sbjct: 11 VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
+VSW+++I G +Q EA++ F MR G P + AC+ +G +E G ++
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMH- 129
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ ++GI S + D+ ++ G + +A +M C D V W +++
Sbjct: 130 CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPC-KDEVSWTAMI 179
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 161/554 (29%), Positives = 275/554 (49%), Gaps = 31/554 (5%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSK--CQPDVVLQNHILNMYGKCGSLEDARMGF 93
S + L+ C SL++L +H H+L+S D+ L N +L +Y K G++ A F
Sbjct: 4 SLISKLLKQCRSLKTLT---TIHAHLLISGSIASSDLTL-NKLLRLYSKFGAVSYAHKLF 59
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
D+ P+ N WTA+I G ++N Q +A +I+M + ++P FT S++KA S LG +
Sbjct: 60 DETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIVPLNFTIASVLKAVSRLGRIK 119
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
G ++ ++ + L+ +N +I ++ + + AR +F + +D SW SMI +
Sbjct: 120 DGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYG 179
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAG 273
G A F+ M I G V + AR+LF + DLASW +++
Sbjct: 180 NNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLFERMPEKDLASWKVMVSA 239
Query: 274 VASHSNANEAMSLFSEMRDRELLP--DGLTVHSLLCAC--IGRL----TLYQGMQVHSYI 325
S N A +LF EL+P D T + ++ C G + + MQ
Sbjct: 240 YMSVGNLVAARNLF------ELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQ----- 288
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
+ NV I+ Y K + A VF ++ + + V+W+++I +
Sbjct: 289 -----ERNVASWVMIIDGYIKVGDVDAARSVFDQMPEK-NLVAWSTMIGGYAKTGHPYSS 342
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
+L+ IKPD ++ AC+++ + + C L ++ V+ L+D+
Sbjct: 343 LKLYKTFKEQGIKPDETFALGIISACSQLGVPDTAESVICDFVGPSLFPNLQVVTSLIDM 402
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y KCG++ A ++F ++ D+ +S++I +A G ++A+ LF+ M+ + P+ V
Sbjct: 403 YAKCGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSEDAISLFSEMQKANIKPDGVAF 462
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
+GVLTAC+H GLV EG L+R M +EYGI P+ +H +C+VD+L RAGC+ EA I M
Sbjct: 463 LGVLTACNHGGLVGEGRRLFRQMIDEYGIQPSEKHYACMVDILGRAGCLEEAHSLICSMP 522
Query: 566 CDADIVVWKSLLAS 579
+ VW +LL++
Sbjct: 523 VAPNATVWGALLSA 536
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/537 (23%), Positives = 229/537 (42%), Gaps = 57/537 (10%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+ + N Y A A+ + NI T A ++ A S L ++ G V+ +
Sbjct: 74 IHGFTENNQYENAF-AFFIKMHRENIVPLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCG 132
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ D+V++N ++ ++ +CG + AR FD+M +R+ VSW +MI G N + + A KL+
Sbjct: 133 YEFDLVVKNVMIELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYGNNGRVDIARKLFD 192
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + V+ ++ S+I+ G + R L + + + L + +++ Y
Sbjct: 193 RMEERNVI----SWTSMIQGYVKAGDLLEARVLFERMPEKD----LASWKVMVSAYMSVG 244
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
++ ARN+F + DV +W MI+ K G A F+ M I G +
Sbjct: 245 NLVAARNLFELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVASWVMIIDGYIK 304
Query: 246 SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
+ AR +F+++ +L +W+ +I G A + ++ L+ +++ + PD +
Sbjct: 305 VGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGI 364
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
+ AC V + N+ V +++ MYAKC + A+ VF E+ D
Sbjct: 365 ISACSQLGVPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVF-EMVDQKD 423
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
++++I A H +E+ LFS M + IKPD + F V+ AC
Sbjct: 424 LHCYSTVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACN------------- 470
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN-----PDVVSWSSLILGYAQF 480
G +G R+LF M + P ++ ++ +
Sbjct: 471 ----------------------HGGLVGEGRRLFRQMIDEYGIQPSEKHYACMVDILGRA 508
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS---HVGLVE-EGLHLYRIMENEYG 533
GC +EA L S+ V+PN +L+AC +V L E L++I N G
Sbjct: 509 GCLEEAHSLIC---SMPVAPNATVWGALLSACRVHLNVQLAEAAATELFQIEPNNSG 562
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 161/541 (29%), Positives = 253/541 (46%), Gaps = 74/541 (13%)
Query: 109 AGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG 168
+ C Y+ AI ++ Q++ G +P FTF ++ AC+ ++ G Q+H ++K
Sbjct: 115 SACGLGYK---AIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFE 171
Query: 169 SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
+ +N+LI Y + I R VF ++ ++V SW S+I ++K G EA+ F EM
Sbjct: 172 RDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEM 231
Query: 229 LHHGAYQPNEFIFGSVFSACSNF------------------------------------- 251
+ G +PN V SAC+
Sbjct: 232 VEVG-IRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGA 290
Query: 252 ---ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCA 308
AR +F+E +L +N +++ A E +++ EM PD +T+ S + A
Sbjct: 291 IDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSA 350
Query: 309 CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL-------- 360
C + G H Y+++ G + VCNAI+ MY KC A VF +
Sbjct: 351 CSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSW 410
Query: 361 ----------------------GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
++D VSWN++I A +Q + +E LF M + I
Sbjct: 411 NSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGIT 470
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
D +T V AC + +L++ +H YI K + FD+ + L+D++ +CG SA ++
Sbjct: 471 ADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQV 530
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
FN M DV +W++ I A G G A++LF M G+ P+ V V +LTA SH GLV
Sbjct: 531 FNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLV 590
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
E+G H++R M++ YGI P H C+VDLL RAG + EA IN M + + V+W SLLA
Sbjct: 591 EQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLA 650
Query: 579 S 579
+
Sbjct: 651 A 651
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 215/473 (45%), Gaps = 39/473 (8%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+ K+ Y EA+ + F IR T G+ISAC+ L+ LQLG +V I +
Sbjct: 212 IGGYAKRGCYKEAVSLF-FEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELE 270
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ + ++ N +++MY KCG+++ AR FD+ +N+V + +++ + + + +
Sbjct: 271 LEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLG 330
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+ML+ G P + T S + ACS L V G+ H +V+++ NA+I MY K
Sbjct: 331 EMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCG 390
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A VF + K SW S+IA F + G ++E+
Sbjct: 391 KQEMACRVFDRMLNKTRVSWNSLIAGFVRNG-DMES------------------------ 425
Query: 246 SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
A +F+ + DL SWN +I + S EA+ LF M+ + D +T+ +
Sbjct: 426 ------AWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGV 479
Query: 306 LCAC--IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
AC +G L L + +H YI K ++ + A++ M+A+C +A+ VF ++ K
Sbjct: 480 ASACGYLGALDLAK--WIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKR 537
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
D +W + I A LF ML IKPD + F ++ A + +E +
Sbjct: 538 -DVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHI 596
Query: 424 HCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
+ G+A ++D+ + G L A L N M+ P+ V W SL+
Sbjct: 597 FRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLL 649
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG---SLGSARKLFN-FMEN 464
G+ K ++ + QLH ITK GL + L+ + G SL A+K F+E+
Sbjct: 38 GSFKKCKTMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIED 97
Query: 465 PDVVS----WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
++ +SSLI G++ G G +A+ +F ++ +G P+ T VL+AC+ + E
Sbjct: 98 NGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTE 157
Query: 521 GLHLY 525
G ++
Sbjct: 158 GFQVH 162
>gi|147771209|emb|CAN67545.1| hypothetical protein VITISV_030949 [Vitis vinifera]
Length = 598
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 163/523 (31%), Positives = 258/523 (49%), Gaps = 50/523 (9%)
Query: 104 WTAMIAGCSQNYQENDAIKLYIQM----LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
W MI + + AI + + ++ + F + S+IKAC+ L ++ GR +H
Sbjct: 4 WLTMIRRHASDANPFHAISFFKAIPRNQRENAPLDDHFVYASLIKACNRLSAIREGRSIH 63
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILD-ARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
HV++ ++ NAL+ +Y+ ++ + A +F I K + + MI+ F K
Sbjct: 64 CHVLRFGLDYNVNVLNALVYLYSSAEKSMGCACALFDKIPEKTIVTVNCMISGFVKNKRF 123
Query: 219 LEALCHFNEMLHHG---AYQPNEFIFGSVFSACSNFARI--------------------- 254
+ FN +L G +PN + S C F R
Sbjct: 124 HAGVGLFNRVLGGGFDLRVKPNYVTLVILISGCVEFGRFSIGNSLHSYCCKTSLDLKNEV 183
Query: 255 -------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
LF+E + DL SWN +IAG A +++ A SLF EMR +
Sbjct: 184 RNALIHLYAEFEYMDAAAKLFHETNVRDLVSWNTMIAGYAKNNDCRNAFSLFREMRIGNV 243
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
D +++ SL+ AC L+ G VH++I G + + A++ MY+KC +
Sbjct: 244 ECDRVSLVSLISACTNXRDLHMGKAVHAFIKVSGMEMMIHFETALINMYSKCGSIELGRK 303
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
VF EL + + SWNS+I ++ E L++ + + +IKPD +T ++ AC
Sbjct: 304 VFDELA-DENIASWNSMIYGYVECGFNIEALSLWNVIQSRKIKPDEVTMLGLISACRSSG 362
Query: 416 SLEMVTQLHCYITKTG-LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
L Q++ YI + L+ + N L+D+Y KCGS+ A +F+ M DV+SW+S+I
Sbjct: 363 DLHQGIQINSYIESSDHLSGSTVLCNALIDMYAKCGSMDRAETVFSKMPRRDVISWTSII 422
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
+GYA G G+EAL F +M + + PN VT +GVL+AC H GLV++G +LY IM Y I
Sbjct: 423 VGYAINGEGEEALLAFRKMGAEKIEPNSVTFLGVLSACDHAGLVDKGKNLYDIMCKYYHI 482
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
P EHC C+VD+ ARAG + EA F+ M + + VVW+ L+
Sbjct: 483 EPKIEHCGCMVDMHARAGMLEEAYKFVKDMPVEPNAVVWRMLI 525
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 229/490 (46%), Gaps = 58/490 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG---- 92
YA LI AC+ L +++ GR +H H+L +V + N ++ +Y S + MG
Sbjct: 42 VYASLIKACNRLSAIREGRSIHCHVLRFGLDYNVNVLNALVYLY----SSAEKSMGCACA 97
Query: 93 -FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG----VMPGQFTFGSIIKACS 147
FDK+P++ +V+ MI+G +N + + + L+ ++L G V P T +I C
Sbjct: 98 LFDKIPEKTIVTVNCMISGFVKNKRFHAGVGLFNRVLGGGFDLRVKPNYVTLVILISGCV 157
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
G +G LH++ K+ +NALI +Y +F+ + A +F +D+ SW +
Sbjct: 158 EFGRFSIGNSLHSYCCKTSLDLKNEVRNALIHLYAEFEYMDAAAKLFHETNVRDLVSWNT 217
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------------- 250
MIA ++K A F EM G + + S+ SAC+N
Sbjct: 218 MIAGYAKNNDCRNAFSLFREM-RIGNVECDRVSLVSLISACTNXRDLHMGKAVHAFIKVS 276
Query: 251 -----------------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
R +F+E+ ++ASWN++I G EA+SL+
Sbjct: 277 GMEMMIHFETALINMYSKCGSIELGRKVFDELADENIASWNSMIYGYVECGFNIEALSLW 336
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV-CNAILTMYAK 346
+ ++ R++ PD +T+ L+ AC L+QG+Q++SYI S V CNA++ MYAK
Sbjct: 337 NVIQSRKIKPDEVTMLGLISACRSSGDLHQGIQINSYIESSDHLSGSTVLCNALIDMYAK 396
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
C + A VF ++ + D +SW SII + + EE F +M A +I+P+ +TF
Sbjct: 397 CGSMDRAETVFSKMPRR-DVISWTSIIVGYAINGEGEEALLAFRKMGAEKIEPNSVTFLG 455
Query: 407 VMGACAKMASLEMVTQLHCYITK-TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-N 464
V+ AC ++ L+ + K + + ++D++ + G L A K M
Sbjct: 456 VLSACDHAGLVDKGKNLYDIMCKYYHIEPKIEHCGCMVDMHARAGMLEEAYKFVKDMPVE 515
Query: 465 PDVVSWSSLI 474
P+ V W LI
Sbjct: 516 PNAVVWRMLI 525
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 184/416 (44%), Gaps = 47/416 (11%)
Query: 30 NIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
++R++P+ T LIS C +G +H + + ++N ++++Y + ++
Sbjct: 139 DLRVKPNYVTLVILISGCVEFGRFSIGNSLHSYCCKTSLDLKNEVRNALIHLYAEFEYMD 198
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
A F + R++VSW MIAG ++N +A L+ +M V + + S+I AC+
Sbjct: 199 AAAKLFHETNVRDLVSWNTMIAGYAKNNDCRNAFSLFREMRIGNVECDRVSLVSLISACT 258
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
+ +G+ +HA + S + + ALI MY+K I R VF +A +++ SW S
Sbjct: 259 NXRDLHMGKAVHAFIKVSGMEMMIHFETALINMYSKCGSIELGRKVFDELADENIASWNS 318
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------ 249
MI + + G+ +EAL +N ++ +P+E + SAC
Sbjct: 319 MIYGYVECGFNIEALSLWN-VIQSRKIKPDEVTMLGLISACRSSGDLHQGIQINSYIESS 377
Query: 250 -----------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
+ A +F+++ D+ SW ++I G A + EA+
Sbjct: 378 DHLSGSTVLCNALIDMYAKCGSMDRAETVFSKMPRRDVISWTSIIVGYAINGEGEEALLA 437
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYA 345
F +M ++ P+ +T +L AC + +G ++ + K + + C ++ M+A
Sbjct: 438 FRKMGAEKIEPNSVTFLGVLSACDHAGLVDKGKNLYDIMCKYYHIEPKIEHCGCMVDMHA 497
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+ +L A K++ ++V W +I AC H L S ++ +K +H
Sbjct: 498 RAGMLEEAYKFVKDMPVEPNAVVWRMLINACRVHGDFNLGLNLVSGLI--DVKTEH 551
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 159/324 (49%), Gaps = 14/324 (4%)
Query: 264 LASWNALIAGVASHSNANEAMSLFSEM----RDRELLPDGLTVHSLLCACIGRLTLYQGM 319
++ W +I AS +N A+S F + R+ L D SL+ AC + +G
Sbjct: 1 MSKWLTMIRRHASDANPFHAISFFKAIPRNQRENAPLDDHFVYASLIKACNRLSAIREGR 60
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMY--AKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
+H ++++ G D NV V NA++ +Y A+ S+ C L K K V+ N +I+ +
Sbjct: 61 SIHCHVLRFGLDYNVNVLNALVYLYSSAEKSMGCACALFDKIPEKTI--VTVNCMISGFV 118
Query: 378 QHNQAEELFRLFSRMLAS----QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
++ + LF+R+L ++KP+++T ++ C + + LH Y KT L
Sbjct: 119 KNKRFHAGVGLFNRVLGGGFDLRVKPNYVTLVILISGCVEFGRFSIGNSLHSYCCKTSLD 178
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
V N L+ +Y + + +A KLF+ D+VSW+++I GYA+ A LF M
Sbjct: 179 LKNEVRNALIHLYAEFEYMDAAAKLFHETNVRDLVSWNTMIAGYAKNNDCRNAFSLFREM 238
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
R V + V+LV +++AC++ + G ++ ++ G+ + ++++ ++ G
Sbjct: 239 RIGNVECDRVSLVSLISACTNXRDLHMGKAVHAFIKVS-GMEMMIHFETALINMYSKCGS 297
Query: 554 VHEAEDFINQMACDADIVVWKSLL 577
+ +++A D +I W S++
Sbjct: 298 IELGRKVFDELA-DENIASWNSMI 320
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Query: 17 EALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSK-CQPDVVLQ 73
EAL ++ Q+ +I+P T GLISAC S L G +++ +I S VL
Sbjct: 331 EALSLWNVIQSR---KIKPDEVTMLGLISACRSSGDLHQGIQINSYIESSDHLSGSTVLC 387
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N +++MY KCGS++ A F KMP+R+V+SWT++I G + N + +A+ + +M +
Sbjct: 388 NALIDMYAKCGSMDRAETVFSKMPRRDVISWTSIIVGYAINGEGEEALLAFRKMGAEKIE 447
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
P TF ++ AC G V G+ L+ + K H
Sbjct: 448 PNSVTFLGVLSACDHAGLVDKGKNLYDIMCKYYH 481
>gi|125555425|gb|EAZ01031.1| hypothetical protein OsI_23065 [Oryza sativa Indica Group]
Length = 671
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 171/570 (30%), Positives = 273/570 (47%), Gaps = 48/570 (8%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
R VH + C L N++L Y G L DAR FD+MP+RNVVSW+ +I S+
Sbjct: 22 RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVASSRL 81
Query: 115 YQENDAIKLYIQMLQSGVM--PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
DA+ L+ ML+ G P FT +++ C+ G Q+HA +K
Sbjct: 82 GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF---SKLGYELEALCHFNEML 229
L+ MY K R+ + F ++ V SW SMIA GY A+ F +ML
Sbjct: 142 VAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKML 201
Query: 230 HHGAYQPNE--------FIFGSVFSACSNFARILFN---EIDSP---------------- 262
+ N F + + L E+D
Sbjct: 202 VLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMD 261
Query: 263 -----------DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL--CAC 309
D S +L+ A + EA+ +F +M + D + SLL C+
Sbjct: 262 EITRLACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSS 321
Query: 310 IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSW 369
+G+L + + ++H Y +K F + + NAI+T+Y KC + ++ +VF L +N D++SW
Sbjct: 322 LGQLRVVK--EIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTL-ENKDTISW 378
Query: 370 NSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK 429
+++ +Q++ ++E F M+ ++ V+ AC+ +SL Q+H + K
Sbjct: 379 TALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVK 438
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
G+ D V N L+ +Y KCG + A K+FN N ++SW++LI ++Q G A++L
Sbjct: 439 LGVDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIISWNALITSFSQHGNEVAAIQL 498
Query: 490 FTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLA 549
F M+ V P+ T VG+L++CS +GLV EG ++ M+ +Y + P EH +C+VDL A
Sbjct: 499 FDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFA 558
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLLAS 579
RAG +A FI+ M C D +VW++LLAS
Sbjct: 559 RAGRFSDAMKFIDAMPCQPDQLVWEALLAS 588
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 141/526 (26%), Positives = 235/526 (44%), Gaps = 61/526 (11%)
Query: 32 RIRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
R RP+++ A L++ C+ + G +VH + D + +++MY KCG + +
Sbjct: 100 RDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSS 159
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQE----NDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
F PQR+V+SWT+MIA C N+ + + AI L+ +ML V P TF I+K
Sbjct: 160 WRAFVLTPQRSVLSWTSMIA-CLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKV 218
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
+ G+Q+H ++K AL+AMY + +D + R D S
Sbjct: 219 FDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGG-MDEITRLACRIRHDAFSR 277
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------- 249
S++ A+++ G +EA+ F +ML G ++ S+ CS
Sbjct: 278 TSLLTAYARNGCNMEAVRVFRDMLM-GHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYAL 336
Query: 250 -NFAR-----------------------ILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
NF R I+FN +++ D SW AL+ + + EA+
Sbjct: 337 KNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALF 396
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
F EM + L + S+L AC +L G Q+HS ++K+G D + V NA++TMYA
Sbjct: 397 FFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYA 456
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
KC V+ AL +F +N +SWN++I + QH +LF M + PD TF
Sbjct: 457 KCGVVQVALKIFNST-RNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFV 515
Query: 406 DVMGACAKMASL----EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
++ +C++M + E Q+ TK L + ++D++ + G A K +
Sbjct: 516 GLLSSCSRMGLVAEGCEYFKQMK---TKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDA 572
Query: 462 ME-NPDVVSWSSLILG---YAQFGCGDEALKLFTRMRSLGVSPNLV 503
M PD + W +L+ + G A K ++ SP ++
Sbjct: 573 MPCQPDQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYII 618
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 168/354 (47%), Gaps = 20/354 (5%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
I S L+ CSSL L++ +++H + L + + D +L N I+ +YGKCG + + +
Sbjct: 307 IDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIV 366
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F+ + ++ +SWTA++ QN +A+ + +M++ G+ F S+++ACS S+
Sbjct: 367 FNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSL 426
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G Q+H+ V+K +NAL+ MY K + A +F+ + + SW ++I +F
Sbjct: 427 SCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIISWNALITSF 486
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS-----P 262
S+ G E+ A+ F +M+ P+++ F + S+CS + F ++ + P
Sbjct: 487 SQHGNEVAAIQLF-DMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEP 545
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
+ + ++ A ++AM M PD L +LL +C L G
Sbjct: 546 KMEHYTCMVDLFARAGRFSDAMKFIDAM---PCQPDQLVWEALLASCRVHGNLDLGRMAA 602
Query: 323 SYIIKMGFDSNVPV-----CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
I+++ + P +A + M+ + LL F++L K+ S +S
Sbjct: 603 KKILEIKPEDPSPYIILSSIHASIDMWDE-KARNRTLLDFQQLRKDVGSSQLDS 655
>gi|449523327|ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like, partial [Cucumis sativus]
Length = 1090
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 168/599 (28%), Positives = 297/599 (49%), Gaps = 69/599 (11%)
Query: 1 FSNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDH 60
F++D++S LC L EA+ A D S + ++ +TY L+ C + S++LGR++H
Sbjct: 47 FNDDHLSYLCSNGLLREAITAID-SISKRGSKLSTNTYINLLQTCIDVGSIELGRELHVR 105
Query: 61 I-LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
+ L+ + P V + +++MY KCG L+DAR FD M +RN+ +W+AMI S+ + +
Sbjct: 106 MGLVHRVNPFV--ETKLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRWKE 163
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
++L+ M+ GV+P F F I++AC + + +H+ VI+ ++ N+++
Sbjct: 164 VVELFFLMMGDGVLPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILT 223
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
+ K ++ AR F + +D SW MIA + + G EA + M + G ++P
Sbjct: 224 AFVKCGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQG-FKPGLV 282
Query: 240 IFGSVFSACSNFARI-----LFNEIDS----PDLASWNALIAGVASHSNANEAMSLFSEM 290
+ + ++ S L +++S PD+ +W ++I+G + S ++A+ F +M
Sbjct: 283 TYNIMIASYSQLGDCDLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQALDFFKKM 342
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ P+ +T+ S AC +L G+++H + IKMG V N+++ MY+KC L
Sbjct: 343 ILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKL 402
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
A VF + + D +WNS+I Q + + LF R+ S + P+ +T+N ++
Sbjct: 403 EAARHVFDTILEK-DVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISG 461
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP----- 465
C I+ G A LF ME
Sbjct: 462 C-----------------------------------IQNGDEDQAMDLFQIMEKDGGVKR 486
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE----- 520
+ SW+SLI GY Q G ++AL +F +M+SL SPN VT++ +L AC++V + E+
Sbjct: 487 NTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANV-MAEKKIKEI 545
Query: 521 -GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G L R +E+E + + +VD A++G + + N M+ DI+ W S++A
Sbjct: 546 HGCVLRRNLESELAV------ANSLVDTYAKSGNIKYSRTVFNGMS-SKDIITWNSIIA 597
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 153/582 (26%), Positives = 262/582 (45%), Gaps = 103/582 (17%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+ ++ AC + L+ + +H ++ + L N IL + KCG L AR F M
Sbjct: 183 FPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMD 242
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+R+ VSW MIAG Q ++A +L M G PG T+ +I + S LG L
Sbjct: 243 ERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDL--- 299
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+I + K + + G+A DV +W SMI+ FS+
Sbjct: 300 -------------------VIDLKKKMESV--------GLA-PDVYTWTSMISGFSQSSR 331
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------- 251
+AL F +M+ G +PN S SAC++
Sbjct: 332 ISQALDFFKKMILAGV-EPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGN 390
Query: 252 --------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
AR +F+ I D+ +WN++I G +A LF +R+ ++P
Sbjct: 391 SLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMP 450
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+ +T ++++ CI Q M + + K G
Sbjct: 451 NVVTWNAMISGCIQNGDEDQAMDLFQIMEKDG---------------------------- 482
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
G ++ SWNS+IA Q + + +F +M + P+ +T ++ ACA + +
Sbjct: 483 ---GVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAE 539
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
+ + ++H + + L ++ V N L+D Y K G++ +R +FN M + D+++W+S+I GY
Sbjct: 540 KKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGY 599
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
GC D A +LF +MR+LG+ PN TL ++ A G+V++G H++ + E+ I+PT
Sbjct: 600 ILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPT 659
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H +VDL R+G + +A +FI M + D+ +W SLL +
Sbjct: 660 LDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTA 701
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 197/452 (43%), Gaps = 85/452 (18%)
Query: 21 AYDFSQNNTNIRIRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
A DF + + P+T A SAC+SL+SLQ G ++H + + ++ N +++
Sbjct: 335 ALDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLID 394
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MY KCG LE AR FD + +++V +W +MI G Q A +L++++ +S VMP T
Sbjct: 395 MYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVT 454
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS--G 196
+ ++I C QN D+ +D + G
Sbjct: 455 WNAMISGC--------------------------IQNG------DEDQAMDLFQIMEKDG 482
Query: 197 IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------ 250
+++ SW S+IA + +LG + +AL F +M + PN S+ AC+N
Sbjct: 483 GVKRNTASWNSLIAGYHQLGEKNKALAIFRQM-QSLNFSPNSVTILSILPACANVMAEKK 541
Query: 251 ----------------------------------FARILFNEIDSPDLASWNALIAGVAS 276
++R +FN + S D+ +WN++IAG
Sbjct: 542 IKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYIL 601
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
H ++ A LF +MR+ + P+ T+ S++ A + +G V S I + +P
Sbjct: 602 HGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEE--HQILPT 659
Query: 337 CN---AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
+ A++ +Y + L +A+ +++ D W S++ AC H L L ++ L
Sbjct: 660 LDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTACRFHGNL-NLAVLAAKRL 718
Query: 394 ASQIKPD-HITFNDVMGACAKMASLEMVTQLH 424
+++PD H+ + ++ A A E ++
Sbjct: 719 -HELEPDNHVIYRLLVQAYALYGKFEQTLKVR 749
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
N+AL + Q+ N T ++ AC+++ + + +++H +L + ++ + N
Sbjct: 505 NKALAIFRQMQS-LNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANS 563
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
+++ Y K G+++ +R F+ M +++++W ++IAG + + A +L+ QM G+ P
Sbjct: 564 LVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPN 623
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN-----ALIAMYTKFDRILDA 190
+ T SII A G V GR HV S H I A++ +Y + R+ DA
Sbjct: 624 RGTLASIIHAYGIAGMVDKGR----HVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADA 679
Query: 191 RNVFSGIA-RKDVTSWGSMIAA 211
+ DV+ W S++ A
Sbjct: 680 IEFIEDMPIEPDVSIWTSLLTA 701
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 153/440 (34%), Positives = 227/440 (51%), Gaps = 46/440 (10%)
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY+K D AR V ++V SW S+I+ ++ G+ AL F EM G PN+F
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV-PNDF 59
Query: 240 IFG-----------------------------SVFSACSNF-----------ARILFNEI 259
F VF CS F AR LF+EI
Sbjct: 60 TFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEI 119
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
+L +WNA I+ + EA+ F E R + P+ +T + L AC L L GM
Sbjct: 120 PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 179
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQ 378
Q+H +++ GFD++V VCN ++ Y KC + ++ ++F E+G KNA VSW S++AA +Q
Sbjct: 180 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNA--VSWCSLVAAYVQ 237
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+++ E+ L+ R ++ + V+ ACA MA LE+ +H + K + +FV
Sbjct: 238 NHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFV 297
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM--RSL 496
+ L+D+Y KCG + + + F+ M ++V+ +SLI GYA G D AL LF M R
Sbjct: 298 GSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGC 357
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
G +PN +T V +L+ACS G VE G+ ++ M + YGI P EH SC+VD+L RAG V
Sbjct: 358 GPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVER 417
Query: 557 AEDFINQMACDADIVVWKSL 576
A +FI +M I VW +L
Sbjct: 418 AYEFIKKMPIQPTISVWGAL 437
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 188/439 (42%), Gaps = 46/439 (10%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MY K E AR+ P RNVVSWT++I+G +QN + A+ + +M + GV+P FT
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
F KA + L G+Q+HA +K + + MY K DAR +F I
Sbjct: 61 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------- 251
+++ +W + I+ G EA+ F E + PN F + +ACS++
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGH-PNSITFCAFLNACSDWLHLNLGM 179
Query: 252 ---------------------------------ARILFNEIDSPDLASWNALIAGVASHS 278
+ I+F E+ + + SW +L+A +
Sbjct: 180 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 239
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
+A L+ R + + S+L AC G L G +H++ +K + + V +
Sbjct: 240 EDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 299
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS--Q 396
A++ MY KC + ++ F E+ + + V+ NS+I Q + LF M
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMPEK-NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 358
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSA 455
P+++TF ++ AC++ ++E ++ + T G+ + ++D+ + G + A
Sbjct: 359 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 418
Query: 456 RKLFNFME-NPDVVSWSSL 473
+ M P + W +L
Sbjct: 419 YEFIKKMPIQPTISVWGAL 437
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 140/305 (45%), Gaps = 29/305 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ACS L LG ++H +L S DV + N +++ YGKC + + + F +M
Sbjct: 161 TFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM 220
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+N VSW +++A QN+++ A LY++ + V F S++ AC+G+ + LGR
Sbjct: 221 GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGR 280
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+HAH +K+ + +AL+ MY K I D+ F + K++ + S+I ++ G
Sbjct: 281 SIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQG 340
Query: 217 YELEALCHFNEMLHHG-AYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVA 275
AL F EM G PN F S+ SACS AG
Sbjct: 341 QVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR---------------------AGAV 379
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
+ M +F MR + G +S + +GR + + + + +I KM +
Sbjct: 380 EN-----GMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVE--RAYEFIKKMPIQPTIS 432
Query: 336 VCNAI 340
V A+
Sbjct: 433 VWGAL 437
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 195/469 (41%), Gaps = 61/469 (13%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S L + ++ ALV + F + T+ A +SLR G+++H L K
Sbjct: 30 ISGLAQNGHFSTALVEF-FEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH--ALAVK 86
Query: 66 CQP--DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
C DV + +MY K +DAR FD++P+RN+ +W A I+ + + +AI+
Sbjct: 87 CGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEA 146
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+I+ + P TF + + ACS + LG QLH V++S + + N LI Y K
Sbjct: 147 FIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGK 206
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
+I + +F+ + K+ SW S++AA+ + +E E + ++F+ S
Sbjct: 207 CKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQ-NHEDEKASVLYLRSRKDIVETSDFMISS 265
Query: 244 VFSACSNFARI----------------------------------------LFNEIDSPD 263
V SAC+ A + F+E+ +
Sbjct: 266 VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 325
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDREL--LPDGLTVHSLLCACIGRLTLYQGMQV 321
L + N+LI G A + A++LF EM R P+ +T SLL AC + GM++
Sbjct: 326 LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 385
Query: 322 -HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
S G + + I+ M + ++ A K++ W ++ AC H
Sbjct: 386 FDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 445
Query: 381 Q-------AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
+ AE LF+ L + +H+ ++ A + A V +
Sbjct: 446 KPQLGLLAAENLFK-----LDPKDSGNHVLLSNTFAAAGRWAEANTVRE 489
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 156/331 (47%), Gaps = 11/331 (3%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR++ + ++ SW +LI+G+A + + + A+ F EMR ++P+ T A
Sbjct: 11 ARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVAS 70
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
G Q+H+ +K G +V V + MY K + +A +F E+ + + +WN+
Sbjct: 71 LRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPER-NLETWNA 129
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
I+ + + E F P+ ITF + AC+ L + QLH + ++G
Sbjct: 130 FISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSG 189
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
DV V NGL+D Y KC + S+ +F M + VSW SL+ Y Q ++A L+
Sbjct: 190 FDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYL 249
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC----SCVVDL 547
R R V + + VL+AC+ + +E G ++ + + E S +VD+
Sbjct: 250 RSRKDIVETSDFMISSVLSACAGMAGLELGRSIH-----AHAVKACVERTIFVGSALVDM 304
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ GC+ ++E ++M + ++V SL+
Sbjct: 305 YGKCGCIEDSEQAFDEMP-EKNLVTRNSLIG 334
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 102/242 (42%), Gaps = 13/242 (5%)
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
MY+K +A LV + L + VSW S+I+ Q+ F M + P+
Sbjct: 1 MYSKLDHPESARLVLR-LTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDF 59
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
TF A A + Q+H K G DVFV D+Y K ARKLF+ +
Sbjct: 60 TFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEI 119
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS-----HVGL 517
++ +W++ I G EA++ F R + PN +T L ACS ++G+
Sbjct: 120 PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 179
Query: 518 VEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
GL L + + + C+ ++D + + +E +M + V W SL+
Sbjct: 180 QLHGLVLRSGFDTDVSV------CNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLV 232
Query: 578 AS 579
A+
Sbjct: 233 AA 234
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/493 (29%), Positives = 251/493 (50%), Gaps = 47/493 (9%)
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M + G++ +F S++ AC+ L ++ GR+LH H+I + + + + AL+ MY K
Sbjct: 1 MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+ DA+ VF G+ KD+ +W S+I+A+++ G A+ + M+ G +PN F
Sbjct: 61 LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGV-EPNVVTFACALG 119
Query: 247 ACSNFA----------------------------------------RILFNEIDSPDLAS 266
C++ A R +F + + ++ S
Sbjct: 120 GCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRS 179
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELL-PDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
+ A+I+ EA+ LFS M E + P+ T ++L A G L +G +VH ++
Sbjct: 180 YTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHL 239
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
GFD+NV V NA++TMY KC A VF + + +SW S+IAA QH +E
Sbjct: 240 ASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTAR-NVISWTSMIAAYAQHGNPQEA 298
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
LF RM ++P ++F+ + ACA + +L+ ++H + + LA + L+ +
Sbjct: 299 LNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLA-SPQMETSLLSM 354
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y +CGSL AR++FN M+ D S +++I + Q G +AL+++ RM G+ + +T
Sbjct: 355 YARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITF 414
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
V VL ACSH LV + ++ + ++G++P EH C+VD+L R+G + +AE+ + M
Sbjct: 415 VSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMP 474
Query: 566 CDADIVVWKSLLA 578
D V W +LL+
Sbjct: 475 YQTDAVAWMTLLS 487
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 247/483 (51%), Gaps = 47/483 (9%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L++AC+ L++L+ GR++H+H++++ + D+ L+ +L MY KCGSL+DA+ F+ M ++
Sbjct: 16 LVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKD 75
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+ +W+++I+ ++ + A+ LY +M+ GV P TF + C+ + + GR +H
Sbjct: 76 LFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQ 135
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
++ S+ + Q++L+ MY K D +++AR VF G+ ++V S+ +MI+A+ + G E
Sbjct: 136 RILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAE 195
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------------- 251
AL F+ M A +PN + F ++ A
Sbjct: 196 ALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALV 255
Query: 252 -----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
AR +F+ + + ++ SW ++IA A H N EA++LF M ++ P G+
Sbjct: 256 TMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGV 312
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
+ S L AC L +G ++H +++ S + ++L+MYA+C L +A VF +
Sbjct: 313 SFSSALNACALLGALDEGREIHHRVVEAHLASP-QMETSLLSMYARCGSLDDARRVFNRM 371
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
K D+ S N++IAA QH + ++ R++ RM I D ITF V+ AC+ + +
Sbjct: 372 -KTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADC 430
Query: 421 TQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYA 478
+ G+ V ++D+ + G LG A +L M D V+W +L+ G
Sbjct: 431 RDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCK 490
Query: 479 QFG 481
+ G
Sbjct: 491 RHG 493
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 198/407 (48%), Gaps = 48/407 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+A + C+S+ L GR +H IL SK D VLQ+ +LNMY KC + +AR F+ M
Sbjct: 113 TFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGM 172
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVCLG 155
RNV S+TAMI+ Q + +A++L+ +M + + P +TF +I+ A GLG++ G
Sbjct: 173 KARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKG 232
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R++H H+ ++++ QNAL+ MY K ++AR VF + ++V SW SMIAA+++
Sbjct: 233 RKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQH 292
Query: 216 GYELEALCHFNEM---------------------------LHHGAYQPN------EFIFG 242
G EAL F M +HH + + E
Sbjct: 293 GNPQEALNLFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQMETSLL 352
Query: 243 SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
S+++ C + AR +FN + + D S NA+IA H +A+ ++ M + DG+
Sbjct: 353 SMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGI 412
Query: 301 TVHSLLCACIGRLTLYQGMQ--VHSYIIKMGFDSNVPVCNAILTMY---AKCSVLCNALL 355
T S+L AC +L + S ++ G VP+ L M + L +A
Sbjct: 413 TFVSVLVAC-SHTSLVADCRDFFQSLVMDHGV---VPLVEHYLCMVDVLGRSGRLGDAEE 468
Query: 356 VFKELGKNADSVSWNSIIAACLQH---NQAEELFRLFSRMLASQIKP 399
+ + + D+V+W ++++ C +H N+ E R + ++ P
Sbjct: 469 LVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLP 515
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 159/291 (54%), Gaps = 4/291 (1%)
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M +R ++ D V SL+ AC L +G ++H ++I GF +++P+ A+L MYAKC
Sbjct: 1 MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L +A VF+ + + D +W+SII+A + + E L+ RM+A ++P+ +TF +G
Sbjct: 61 LDDAKRVFEGM-EIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALG 119
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
CA +A L +H I + + D + + L+++Y+KC + ARK+F M+ +V S
Sbjct: 120 GCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRS 179
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSL-GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
++++I Y Q G EAL+LF+RM + + PN T +L A +G +E+G ++R +
Sbjct: 180 YTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHL 239
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ G + +V + + G EA + M +++ W S++A+
Sbjct: 240 ASR-GFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTA-RNVISWTSMIAA 288
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 175/365 (47%), Gaps = 19/365 (5%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S+ + + EAL + I T+A ++ A L +L+ GRKVH H+
Sbjct: 184 ISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRG 243
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+VV+QN ++ MYGKCGS +AR FD M RNV+SWT+MIA +Q+ +A+ L+
Sbjct: 244 FDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFK 303
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M V P +F S + AC+ LG++ GR++H V+++ S + + +L++MY +
Sbjct: 304 RM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQM-ETSLLSMYARCG 359
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ DAR VF+ + +D S +MIAAF++ G + +AL + M G + F SV
Sbjct: 360 SLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEG-IPADGITFVSVL 418
Query: 246 SACSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
ACS+ F ++ + P + + ++ + +A L M
Sbjct: 419 VACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETM---PY 475
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
D + +LL C L +G + + ++ +P + MYA +A
Sbjct: 476 QTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYV-FLSNMYAAAKRFDDARR 534
Query: 356 VFKEL 360
V KE+
Sbjct: 535 VRKEM 539
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 173/600 (28%), Positives = 287/600 (47%), Gaps = 54/600 (9%)
Query: 32 RIRPSTYAGLISACSSLRSLQL------GRKVHDHILLSKCQPDVVLQNHILNMYGKCGS 85
R P + G +S + L+ G +H L S + N ++ Y
Sbjct: 3 RAPPLAFTGQVSHTQFIEHLRRASRPRDGEALHAWALKSGSSSHAPVSNSLITFYSSFPR 62
Query: 86 L--EDARMGFDKMPQ--RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG-VMPGQFTFG 140
L A F +P R+V SW +++ S +++ A+ + ML S ++P +F
Sbjct: 63 LFLPAAFAVFADIPAAARDVASWNSLLNPLS-HHRPLAALSHFRSMLSSSTILPSPHSFA 121
Query: 141 SIIKACSGLGSVCLGRQLHAHVIK-SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR 199
+ A + S G +HA K S++ AL+ MY K I DA+ VF +
Sbjct: 122 AAFTAAARAHSASAGAVVHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPH 181
Query: 200 KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA------------ 247
++ SW +M+A ++ EA F +ML NEF+ +V SA
Sbjct: 182 RNEVSWAAMVAGYAARKCSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQ 241
Query: 248 ----------------------------CSNFARILFNEIDSPDLASWNALIAGVASHSN 279
C + A +F + +W+A+I G + + N
Sbjct: 242 VHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGN 301
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
A A+ +FS+M P T+ +L AC TL +G Q H ++K+GF+ V V +A
Sbjct: 302 AESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSA 361
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
++ MYAKC + +A F + + D V W +++ +Q+ + E+ L++RM + P
Sbjct: 362 LVDMYAKCGCIGDAKECFNQFSE-LDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFP 420
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
+ +T ++ ACA +A+LE QLH I K G V + L +Y KCG+L +F
Sbjct: 421 NTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVF 480
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
M + DV++W+S+I G++Q G G++A+ LF M+ G +P+ VT + VL ACSH+GLV+
Sbjct: 481 RRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVD 540
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
G +R M +YG+ P +H +C+VD+L+RAG + EA+DFI + D +W+ +L +
Sbjct: 541 RGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDFIESITIDHGTCLWRIVLGA 600
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 155/492 (31%), Positives = 233/492 (47%), Gaps = 46/492 (9%)
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
M Q +++A + S+ G QLH + K GS + N LI MY K + A
Sbjct: 1 MERQKMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACE 60
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA 252
VF G+ ++V SW +++ F + G L EM PNE+ + AC
Sbjct: 61 VFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVG 120
Query: 253 -------------RILFNEID----------------------------SPDLASWNALI 271
R + E D +A+WNA++
Sbjct: 121 DTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMV 180
Query: 272 AGVASHSNANEAMSLFSEMRDRE--LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
+G A + +A+ +F EMR E PD T SLL AC G +G QVH+ + G
Sbjct: 181 SGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASG 240
Query: 330 FD--SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
F SN + A++ MY KC L A+ VF+ L + + + W +++ Q Q E
Sbjct: 241 FSTASNAILAGALVDMYVKCRRLPVAMQVFERL-ERKNVIQWTAVVVGHAQEGQVTEALE 299
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
LF R S +PD + V+G A A +E Q+HCY K DV N ++D+Y+
Sbjct: 300 LFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYL 359
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
KCG A ++F M P+VVSW++++ G + G G EA+ LF MR+ GV P+ VT +
Sbjct: 360 KCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLA 419
Query: 508 VLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
+L+ACSH GLV+E + + + + P EH +C+VDLL RAG + EA D I M +
Sbjct: 420 LLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPME 479
Query: 568 ADIVVWKSLLAS 579
+ VW++LL++
Sbjct: 480 PTVGVWQTLLSA 491
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 142/528 (26%), Positives = 234/528 (44%), Gaps = 54/528 (10%)
Query: 34 RPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
R AGL+ A + SL+ G ++H I D +L N++++MY KCG L+ A F
Sbjct: 3 RQKMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVF 62
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGLGSV 152
M RNVVSWTA++ G ++ ++L +M S P ++T + +KAC +G
Sbjct: 63 GGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDT 122
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAA 211
G +H +++ + H + ++L+ +Y+K RI DAR VF G + +W +M++
Sbjct: 123 AAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSG 182
Query: 212 FSKLGYELEALCHFNEMLHH-GAYQPNEFIFGSVFSACSNF------------------- 251
++ G+ +AL F EM H G +QP+EF F S+ ACS
Sbjct: 183 YAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFS 242
Query: 252 -----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
A +F ++ ++ W A++ G A EA+ LF
Sbjct: 243 TASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFR 302
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
PD + S++ + QG QVH Y IK ++V N+I+ MY KC
Sbjct: 303 RFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCG 362
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ A +F+E+ + + VSW +++ +H E LF M A ++PD +T+ ++
Sbjct: 363 LPDEAERMFREM-RAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALL 421
Query: 409 GACAKMASLEMVTQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPD 466
AC+ ++ + C + ++D+ + G L AR L M P
Sbjct: 422 SACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPT 481
Query: 467 VVSWSSLILG---YAQFGCGDEALKLFTRMRSLGVSP-NLVTLVGVLT 510
V W +L+ + G EA + M G +P N VTL VL
Sbjct: 482 VGVWQTLLSACRVHKDVAVGREAGDVLLAMD--GDNPVNYVTLSNVLA 527
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 167/559 (29%), Positives = 264/559 (47%), Gaps = 60/559 (10%)
Query: 74 NHILNMYGKCGS---LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
N +L Y G L AR FD++P+ + VSW +++A DA +L M
Sbjct: 30 NQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHAR 89
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G+ F GS +++ + LG QL + +KS ++ + +AL+ +Y K R+ DA
Sbjct: 90 GLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDA 149
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV------ 244
R VF G+ ++ SW ++IA +++ +A+ F EM P++ F ++
Sbjct: 150 RRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEM-QRVELVPDDATFAALLATVEG 208
Query: 245 --------------------------------FSACSNFA--RILFNEIDSPDLASWNAL 270
+S C FA R +F+ I S DL SWN++
Sbjct: 209 PSWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSM 268
Query: 271 IAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGR-LTLYQGMQVHSYIIKM 328
+ A H +EAM F M R+ + PD + S++ C QG +HS ++K+
Sbjct: 269 LGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKI 328
Query: 329 GFDSNVPVCNAILTMYAKCS--------VLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
G + VCNA++ MY + + C LVFK D+VSWNS++ H
Sbjct: 329 GLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVFK------DAVSWNSMLTGYSHHG 382
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
+ + R F M A + D + + +C+ +A L + Q+H + ++G + + FV +
Sbjct: 383 LSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHSLVIQSGFSSNDFVSS 442
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+ +Y KCG +G ARK F + V W+S++ GYAQ G LF+ M V
Sbjct: 443 SLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTVTDLFSEMLDHKVPL 502
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ VT V +LTA SH GLV+EG + ME Y I EH +C VDL RAG + +A++
Sbjct: 503 DHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYACGVDLYGRAGQLDKAKEL 562
Query: 561 INQMACDADIVVWKSLLAS 579
I M D +VW +LL +
Sbjct: 563 IESMPFQPDAMVWMTLLGA 581
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 1/156 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ L ++AL + F + N+ + + +CS L L+LGR+VH ++
Sbjct: 372 NSMLTGYSHHGLSSDALRFFRFMRAE-NVSTDEFALSAALRSCSDLAVLRLGRQVHSLVI 430
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S + + + ++ MY KCG + DAR F++ + + V W +M+ G +Q+ Q
Sbjct: 431 QSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTVTD 490
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
L+ +ML V TF +++ A S G V G ++
Sbjct: 491 LFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEI 526
>gi|357474955|ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508818|gb|AES89960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 871
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 171/571 (29%), Positives = 268/571 (46%), Gaps = 56/571 (9%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
+ +H +++S PD L +++Y G L AR F ++P S+ +I N
Sbjct: 57 KTLHASLIISGHPPDTTL----ISLYASFGFLRHARTLFHRLPSPTHHSFKLIIRWHFLN 112
Query: 115 YQENDAIKLY-IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA 173
+ + Y + G F ++K S L + L +LH +++KS +
Sbjct: 113 DVHSHVVSFYNLARTTLGSFNDLVVFSILLKTASQLRDIVLTTKLHCNILKSNAADSFVL 172
Query: 174 QNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA 233
+L+ Y+K ++ DAR VF I + V SW SMI A+ + E L FN M G
Sbjct: 173 -TSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRM-REGF 230
Query: 234 YQPNEFIFGSVFSACSNF----------------------------------------AR 253
N F GS+ +AC+ AR
Sbjct: 231 LDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDAR 290
Query: 254 ILFNEID------SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC 307
+F+E DL W A+I G A+ LF++ + +LP+ +T+ SLL
Sbjct: 291 SVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLS 350
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
AC + G +H ++K G D + + N+++ MYAKC ++ +A VF + D V
Sbjct: 351 ACAQLENIVMGKLLHVLVVKYGLD-DTSLRNSLVDMYAKCGLIPDAHYVFATT-VDKDVV 408
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
SWNS+I+ Q A E LF+RM PD +T V+ ACA + + ++ LH +
Sbjct: 409 SWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFA 468
Query: 428 TKTGL-AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEA 486
K GL + ++V L++ Y KCG SAR +F+ M + V+W+++I G G G +
Sbjct: 469 LKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGS 528
Query: 487 LKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVD 546
L LF M + PN V +L ACSH G+VEEGL ++ M E +P+ +H +C+VD
Sbjct: 529 LALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVD 588
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLL 577
LLARAG + EA DFI++M + V+ + L
Sbjct: 589 LLARAGNLQEALDFIDKMPVQPGVGVFGAFL 619
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 186/412 (45%), Gaps = 52/412 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T L++AC+ L L G+ VH +++ + + + L +LNMY KCG + DAR FD+
Sbjct: 237 TVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEF 296
Query: 97 PQR------NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
++V WTAMI G +Q A++L+ ++P T S++ AC+ L
Sbjct: 297 SVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLE 356
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
++ +G+ LH V+K + +N+L+ MY K I DA VF+ KDV SW S+I+
Sbjct: 357 NIVMGKLLHVLVVKYGLDDTSL-RNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVIS 415
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------- 249
+++ G EAL FN M ++ P+ V SAC+
Sbjct: 416 GYAQSGSAYEALDLFNRM-RMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLV 474
Query: 250 -----------NF---------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
NF AR++F+ + + +W A+I G + +++LF +
Sbjct: 475 SSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRD 534
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAKCS 348
M EL+P+ + +LL AC + +G+ + ++ K + F ++ ++ + A+
Sbjct: 535 MLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAG 594
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
L AL ++ + + + C H+ + RML ++ PD
Sbjct: 595 NLQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRRML--ELHPD 644
>gi|147859671|emb|CAN83112.1| hypothetical protein VITISV_026574 [Vitis vinifera]
Length = 833
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 162/537 (30%), Positives = 262/537 (48%), Gaps = 61/537 (11%)
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
+ G E+A+M FD+MPQRN V++ AMI G QN + + L+ +M + + F++ +
Sbjct: 207 RNGFTEEAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMPERDI----FSYNT 262
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
+I G + + + + +++ N++I+ Y I +A VFSG+ KD
Sbjct: 263 MIAGLMKFGDI----NGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSGMVLKD 318
Query: 202 VTSWG-------------------------------SMIAAFSKLGYELEALCHFNEMLH 230
V SW +MI+ + G +EA F +M
Sbjct: 319 VVSWNLVIAGLVGVGKVDLAEEFFKEMGTRDIASWTTMISGLASAGRIVEARGLFEDMPV 378
Query: 231 HGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
N I G + + C +LF ++ D SWN +I G+ + AM LF EM
Sbjct: 379 RDVRAWNTMIAGYLENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRNQRIQNAMRLFVEM 438
Query: 291 -----RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
R + GL + L+ + H+++ K F V N I+ Y
Sbjct: 439 PQKCRRSWNSIVFGLIRNGLI------------KEAHAFLEKSPFSDTVSWTNLIVG-YF 485
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
+ + A+ +F EL D+ +WN II +++ EE + F +M PD TF
Sbjct: 486 ETGEVDTAVSIF-ELMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKEGGPFPDEATFT 544
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
V+ C+ + +L + Q+H +TKTG + V V N ++ +Y +CG+ SA LF+ M +
Sbjct: 545 SVLTICSDLPTLHLGRQIHAQVTKTGFNYFVAVSNAMVTLYARCGNSNSALLLFSSMTSH 604
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
DV+SW+S+I G A G G EA+++F +MRS + PN +T VGVL+ACSH GLV++G + +
Sbjct: 605 DVISWNSIICGLAHNGNGVEAIEMFEKMRSTDIKPNRITFVGVLSACSHAGLVDQGKYYF 664
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV---VWKSLLAS 579
M+ + + PT EH +C+VDLL R G + EA F+ QM + V VW ++L +
Sbjct: 665 DFMKYKCCLEPTIEHYTCIVDLLGRFGLIDEAMSFLRQMEANGVEVPASVWGAVLGA 721
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 141/579 (24%), Positives = 232/579 (40%), Gaps = 124/579 (21%)
Query: 3 NDYVSSLCKQNLYNEALVAYD-FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
N +S + EA + +D Q NT TY +I G + D +
Sbjct: 199 NSRISDCMRNGFTEEAQMLFDEMPQRNT------VTYNAMIRGYFQNGHFGEGVSLFDEM 252
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ D+ N ++ K G + A F KMP R+VVSW +MI+G N +A+
Sbjct: 253 ----PERDIFSYNTMIAGLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEAL 308
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ-NALIAM 180
+++ M+ V+ ++ +I G+G V L + E G+ IA +I+
Sbjct: 309 RVFSGMVLKDVV----SWNLVIAGLVGVGKVDLAEEFF-----KEMGTRDIASWTTMISG 359
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAA-------------FSKLGYE--------- 218
RI++AR +F + +DV +W +MIA F K+
Sbjct: 360 LASAGRIVEARGLFEDMPVRDVRAWNTMIAGYLENGCIEIGEVLFQKMPQRDFRSWNEMI 419
Query: 219 ---------LEALCHFNEMLHHGAYQPNEFIFG----------------SVFSACSNFAR 253
A+ F EM N +FG S FS ++
Sbjct: 420 NGLVRNQRIQNAMRLFVEMPQKCRRSWNSIVFGLIRNGLIKEAHAFLEKSPFSDTVSWTN 479
Query: 254 ILFN-----EIDSP----------DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
++ E+D+ D +WN +I G+ + + E + F +M++ PD
Sbjct: 480 LIVGYFETGEVDTAVSIFELMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKEGGPFPD 539
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
T S+L C TL+ G Q+H+ + K GF+ V V NA++T+YA+C +ALL+F
Sbjct: 540 EATFTSVLTICSDLPTLHLGRQIHAQVTKTGFNYFVAVSNAMVTLYARCGNSNSALLLFS 599
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+ + D +SWNSII + E +F +M ++ IKP+ ITF V+ AC+
Sbjct: 600 SMTSH-DVISWNSIICGLAHNGNGVEAIEMFEKMRSTDIKPNRITFVGVLSACSHA---- 654
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-----NPDVVSWSSL 473
GL+D + F+FM+ P + ++ +
Sbjct: 655 ----------------------GLVD---------QGKYYFDFMKYKCCLEPTIEHYTCI 683
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
+ +FG DEA+ +M + GV VL AC
Sbjct: 684 VDLLGRFGLIDEAMSFLRQMEANGVEVPASVWGAVLGAC 722
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 130/274 (47%), Gaps = 18/274 (6%)
Query: 60 HILLSKCQ-PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
H L K D V +++ Y + G ++ A F+ MP R+ +W +I G +N
Sbjct: 463 HAFLEKSPFSDTVSWTNLIVGYFETGEVDTAVSIFELMPARDATAWNVIIWGLGENDHGE 522
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
+ +K +++M + G P + TF S++ CS L ++ LGRQ+HA V K+ + NA++
Sbjct: 523 EGLKFFVKMKEGGPFPDEATFTSVLTICSDLPTLHLGRQIHAQVTKTGFNYFVAVSNAMV 582
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
+Y + A +FS + DV SW S+I + G +EA+ F +M +PN
Sbjct: 583 TLYARCGNSNSALLLFSSMTSHDVISWNSIICGLAHNGNGVEAIEMFEKM-RSTDIKPNR 641
Query: 239 FIFGSVFSACS-----NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLFS 288
F V SACS + + F+ + P + + ++ + +EAMS
Sbjct: 642 ITFVGVLSACSHAGLVDQGKYYFDFMKYKCCLEPTIEHYTCIVDLLGRFGLIDEAMSFL- 700
Query: 289 EMRDRELLPDGLTVH-SLLCACIGRLTLYQGMQV 321
R++ +G+ V S+ A +G +++ +QV
Sbjct: 701 ----RQMEANGVEVPASVWGAVLGACRIHKNIQV 730
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 158/359 (44%), Gaps = 53/359 (14%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
DV N ++ Y + G +E + F KMPQR+ SW MI G +N + +A++L+++M
Sbjct: 380 DVRAWNTMIAGYLENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRNQRIQNAMRLFVEMP 439
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
Q + ++ SI+ GL L ++ HA + KS S ++ LI Y + +
Sbjct: 440 QK----CRRSWNSIV---FGLIRNGLIKEAHAFLEKSPF-SDTVSWTNLIVGYFETGEVD 491
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
A ++F + +D T+W +I + + E L F +M G + P+E F SV + C
Sbjct: 492 TAVSIFELMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKEGGPF-PDEATFTSVLTIC 550
Query: 249 ----------------------------------------SNFARILFNEIDSPDLASWN 268
SN A +LF+ + S D+ SWN
Sbjct: 551 SDLPTLHLGRQIHAQVTKTGFNYFVAVSNAMVTLYARCGNSNSALLLFSSMTSHDVISWN 610
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI-IK 327
++I G+A + N EA+ +F +MR ++ P+ +T +L AC + QG ++ K
Sbjct: 611 SIICGLAHNGNGVEAIEMFEKMRSTDIKPNRITFVGVLSACSHAGLVDQGKYYFDFMKYK 670
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVS---WNSIIAACLQHNQAE 383
+ + I+ + + ++ A+ +++ N V W +++ AC H +
Sbjct: 671 CCLEPTIEHYTCIVDLLGRFGLIDEAMSFLRQMEANGVEVPASVWGAVLGACRIHKNIQ 729
>gi|449516814|ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like isoform 1 [Cucumis sativus]
Length = 703
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 164/598 (27%), Positives = 276/598 (46%), Gaps = 94/598 (15%)
Query: 45 CSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD---------- 94
C+S ++ G+++H +L + + N ++NMY KCG L AR+ FD
Sbjct: 71 CASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDSVSC 130
Query: 95 ---------------------KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
KMP+R VS+T MI G +QN +AI+++ M +GV
Sbjct: 131 NIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVA 190
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P + T S++ ACS +G + R LHA VIK ++ L+ MY F + D + +
Sbjct: 191 PNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRL 250
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR 253
F+ + ++ SW M+ + K S + AR
Sbjct: 251 FNEMPVRNTVSWNVMLKGYVK-------------------------------SGLVDQAR 279
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
LF I D+ SW +I G +A+ L+S MR +L P+ + + LL AC +
Sbjct: 280 ELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSV 339
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK--------------- 358
++ +G Q HS I+K GF + I++ YA C + A L ++
Sbjct: 340 SIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIV 399
Query: 359 ---------------ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
++ D SW+++I+ Q+ + LF M+ S+++P+ IT
Sbjct: 400 GFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEIT 459
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
V A A + L H Y+ + + + ++D+Y KCGS+ +A +F ++
Sbjct: 460 MVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIK 519
Query: 464 NPD--VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
+ V W+++I G A G + +L++F+ ++ + N +T +GVL+AC H GLVE G
Sbjct: 520 DKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVG 579
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ M+ ++G+ P +H C+VDLL R G + EAE+ + M AD+V+W +LLAS
Sbjct: 580 ERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLAS 637
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 136/330 (41%), Gaps = 64/330 (19%)
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD-GLTVHSLLCACIGRLTLYQGMQ 320
P W + + + S + +S F R D L+V S L C + G Q
Sbjct: 23 PLYLKWVSTFSTIESSPRPLQNLSSFLNGRPSSSSLDCELSVVSALKYCASSSAISSGQQ 82
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H+ ++K GF+SN + N+++ MY KC +L +A L+F DSVS N +++ ++
Sbjct: 83 IHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSV-LDSVSCNIMMSGYVKLR 141
Query: 381 QAEELFRLFSR-------------------------------MLASQIKPDHITFNDVMG 409
Q E +LF++ M ++ + P+ +T VM
Sbjct: 142 QLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASVMS 201
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
AC+ + + LH + K V + L+ +Y SL ++LFN M + VS
Sbjct: 202 ACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVS 261
Query: 470 WSSLILGYAQFGCGDEALKLFTR-------------------------------MRSLGV 498
W+ ++ GY + G D+A +LF R MR +
Sbjct: 262 WNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDL 321
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
PN V +V +L+AC +EEG + ++
Sbjct: 322 HPNEVLIVDLLSACGQSVSIEEGRQFHSLI 351
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 105/241 (43%), Gaps = 34/241 (14%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC----------------- 83
L+SAC S++ GR+ H I+ + +Q I++ Y C
Sbjct: 331 LLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSH 390
Query: 84 --------------GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
G ++ AR FD MP+++V SW+ MI+G +QN + A+ L+ M+
Sbjct: 391 LTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMID 450
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD 189
S V P + T S+ A + LG + GR H +V + A+I MY K I
Sbjct: 451 SKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSIDT 510
Query: 190 ARNVFSGIARK--DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
A +VF I K V+ W ++I + G+ +L F+ L + + N F V SA
Sbjct: 511 ALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSN-LQRRSIKLNSITFLGVLSA 569
Query: 248 C 248
C
Sbjct: 570 C 570
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 154/488 (31%), Positives = 240/488 (49%), Gaps = 53/488 (10%)
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
I++ C V +++HAH++K+ L+ +Y K + AR VF + R++
Sbjct: 75 ILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRN 134
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------- 251
V SW +++ + A+ F EML GAY P + G+ SA S+
Sbjct: 135 VVSWTTLMTGYVHDSKPELAVQVFREMLEAGAY-PTNYTLGTALSASSDLHSKELGKQIH 193
Query: 252 ------------------------------ARILFNEIDSPDLASWNALIAGVASHSNAN 281
A F I ++ SW +I+ + A
Sbjct: 194 GYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAA 253
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
+ F EM + P+ T+ S L C +L G Q+HS IK+GF+SN+P+ N+I+
Sbjct: 254 TGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIM 313
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ-----------HNQAEELFRLFS 390
+Y KC + A +F E+ + V+WN++IA + H E +F
Sbjct: 314 YLYLKCGWIHEAKKLFDEM-ETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFL 372
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
++ S +KPD TF+ V+ C+ + +LE Q+H KTG DV V L+++Y KCG
Sbjct: 373 KLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCG 432
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
S+ A K F M ++SW+S+I GYAQ G +AL LF MR GV PN +T VGVL+
Sbjct: 433 SIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLS 492
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSH G+V+E L +++M+NEY I P +H +C++D+ R G + EA DFI +M + +
Sbjct: 493 ACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNE 552
Query: 571 VVWKSLLA 578
+W L+A
Sbjct: 553 FIWSILIA 560
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 153/514 (29%), Positives = 245/514 (47%), Gaps = 65/514 (12%)
Query: 23 DFSQNNTNIR----IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
DF + + IR + + Y ++ C + + +K+H HI+ + D L ++N
Sbjct: 53 DFREALSFIREGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVN 112
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
+Y KCG++E AR FD++P+RNVVSWT ++ G + + A++++ +ML++G P +T
Sbjct: 113 VYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYT 172
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
G+ + A S L S LG+Q+H + IK N+L ++Y+K + A F I
Sbjct: 173 LGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIR 232
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC---------- 248
K+V SW ++I+A+ G L F EML +PNEF S S C
Sbjct: 233 DKNVISWTTVISAWGDNGEAATGLQFFVEMLSE-CVEPNEFTLTSALSLCCVMQSLDIGT 291
Query: 249 ------------SNF------------------ARILFNEIDSPDLASWNALIAG----- 273
SN A+ LF+E+++ L +WNA+IAG
Sbjct: 292 QIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMM 351
Query: 274 ------VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
+A+H EA+S+F ++ + PD T S+L C + L QG QVH+ IK
Sbjct: 352 DFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIK 411
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
GF S+V V A++ MY KC + A F E+ +SW S+I Q+ Q ++
Sbjct: 412 TGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRT-LISWTSMITGYAQNGQPQQALL 470
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF-VMNG---LM 443
LF M + ++P+ ITF V+ AC+ MV + Y + + VM+ L+
Sbjct: 471 LFEDMRLAGVRPNKITFVGVLSACSHAG---MVDEALDYFQMMKNEYKITPVMDHYACLI 527
Query: 444 DIYIKCGSLGSARKLFNFME-NPDVVSWSSLILG 476
D++++ G L A M+ P+ WS LI G
Sbjct: 528 DMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAG 561
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 192/433 (44%), Gaps = 72/433 (16%)
Query: 35 PSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
P+ Y +SA S L S +LG+++H + + + + D + N + ++Y KCGSLE A
Sbjct: 168 PTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKA 227
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F ++ +NV+SWT +I+ N + ++ +++ML V P +FT S + C + S+
Sbjct: 228 FRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSL 287
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
+G Q+H+ IK S+L +N+++ +Y K I +A+ +F + + +W +MIA
Sbjct: 288 DIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGH 347
Query: 213 SKL---------GYE--LEALCHFNEMLHHGAYQPNEFIFG------------------- 242
+++ ++ EAL F + L+ +P+ F F
Sbjct: 348 ARMMDFAKDDLAAHQCGTEALSIFLK-LNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVH 406
Query: 243 -------------------SVFSACSNFARI--LFNEIDSPDLASWNALIAGVASHSNAN 281
++++ C + R F E+ L SW ++I G A +
Sbjct: 407 AQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQ 466
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCAC-----IGRLTLYQGMQVHSYIIKMGFDSNVPV 336
+A+ LF +MR + P+ +T +L AC + Y M + Y I PV
Sbjct: 467 QALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKI-------TPV 519
Query: 337 CN---AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
+ ++ M+ + L A KE+ + W+ +IA C + E F ++L
Sbjct: 520 MDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLL 579
Query: 394 ASQIKP-DHITFN 405
+KP D T+N
Sbjct: 580 --NLKPKDTETYN 590
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 183/389 (47%), Gaps = 39/389 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T +S C ++SL +G ++H + + ++ ++N I+ +Y KCG + +A+ FD+M
Sbjct: 273 TLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEM 332
Query: 97 PQRNVVSWTAMIAGCSQ--NYQEND---------AIKLYIQMLQSGVMPGQFTFGSIIKA 145
++V+W AMIAG ++ ++ ++D A+ +++++ +SG+ P FTF S++
Sbjct: 333 ETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSV 392
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
CS L ++ G Q+HA IK+ S ++ AL+ MY K I A F ++ + + SW
Sbjct: 393 CSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISW 452
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------NFARILF 256
SMI +++ G +AL F +M G +PN+ F V SACS ++ +++
Sbjct: 453 TSMITGYAQNGQPQQALLLFEDMRLAGV-RPNKITFVGVLSACSHAGMVDEALDYFQMMK 511
Query: 257 NEID-SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
NE +P + + LI +EA EM +L P+ L+ C + L
Sbjct: 512 NEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEM---DLEPNEFIWSILIAGCRSQGKL 568
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMY---AKCSVLCNALLVFKE--LGKNADSVSWN 370
G ++ + + N +L MY K + + KE LG+ D SW
Sbjct: 569 ELGFYAAEQLLNLK-PKDTETYNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKD-WSWI 626
Query: 371 SIIAA-------CLQHNQAEELFRLFSRM 392
SI H Q+ E++ L +
Sbjct: 627 SIKDKIYSFKRNARSHAQSGEMYELLGNL 655
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
A CL +A R +++ ++ P ++ C + ++H +I KTG
Sbjct: 49 ARCLDFREALSFIREGTKVESAFYVP-------ILQECIDKKLVSDAQKIHAHIVKTGAH 101
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
D F+M L+++Y KCG++ +ARK+F+ + +VVSW++L+ GY + A+++F M
Sbjct: 102 KDAFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREM 161
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRI 527
G P TL L+A S + E G +H Y I
Sbjct: 162 LEAGAYPTNYTLGTALSASSDLHSKELGKQIHGYSI 197
>gi|449470126|ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Cucumis sativus]
Length = 1463
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 169/599 (28%), Positives = 297/599 (49%), Gaps = 69/599 (11%)
Query: 1 FSNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDH 60
F++D++S LC L EA+ A D S + ++ +TY L+ C + S++LGR++H
Sbjct: 47 FNDDHLSYLCSNGLLREAITAID-SISKRGSKLSTNTYINLLQTCIDVGSIELGRELHVR 105
Query: 61 I-LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
+ L+ + P V + +++MY KCG L+DAR FD M +RN+ +W+AMI S+ + +
Sbjct: 106 MGLVHRVNPFV--ETKLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRWKE 163
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
++L+ M+ GV+P F F I++AC + + +H+ VI+ ++ N+++
Sbjct: 164 VVELFFLMMGDGVLPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILT 223
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
+ K ++ AR F + +D SW MIA + + G EA + M + G ++P
Sbjct: 224 AFVKCGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQG-FKPGLV 282
Query: 240 IFGSVFSACSNFARI-----LFNEIDS----PDLASWNALIAGVASHSNANEAMSLFSEM 290
+ + ++ S L +++S PD+ +W ++I+G + S ++A+ F +M
Sbjct: 283 TYNIMIASYSQLGDCDLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQALDFFKKM 342
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ P+ +T+ S AC +L G+++H + IKMG V N+++ MY+KC L
Sbjct: 343 ILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKL 402
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
A VF + D +WNS+I Q + + LF R+ S + P+ +T+N ++
Sbjct: 403 EAARHVFDTI-LEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISG 461
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP----- 465
C + NG D A LF ME
Sbjct: 462 C--------------------------IQNGDED---------QAMDLFQIMEKDGGVKR 486
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE----- 520
+ SW+SLI GY Q G ++AL +F +M+SL SPN VT++ +L AC++V + E+
Sbjct: 487 NTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANV-MAEKKIKEI 545
Query: 521 -GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G L R +E+E + + +VD A++G + + N M+ DI+ W S++A
Sbjct: 546 HGCVLRRNLESELAV------ANSLVDTYAKSGNIKYSRTVFNGMS-SKDIITWNSIIA 597
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 153/582 (26%), Positives = 262/582 (45%), Gaps = 103/582 (17%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+ ++ AC + L+ + +H ++ + L N IL + KCG L AR F M
Sbjct: 183 FPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMD 242
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+R+ VSW MIAG Q ++A +L M G PG T+ +I + S LG L
Sbjct: 243 ERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDL--- 299
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
+I + K + + G+A DV +W SMI+ FS+
Sbjct: 300 -------------------VIDLKKKMESV--------GLA-PDVYTWTSMISGFSQSSR 331
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------------- 251
+AL F +M+ G +PN S SAC++
Sbjct: 332 ISQALDFFKKMILAGV-EPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGN 390
Query: 252 --------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
AR +F+ I D+ +WN++I G +A LF +R+ ++P
Sbjct: 391 SLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMP 450
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+ +T ++++ CI Q M + + K G
Sbjct: 451 NVVTWNAMISGCIQNGDEDQAMDLFQIMEKDG---------------------------- 482
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
G ++ SWNS+IA Q + + +F +M + P+ +T ++ ACA + +
Sbjct: 483 ---GVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAE 539
Query: 418 EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
+ + ++H + + L ++ V N L+D Y K G++ +R +FN M + D+++W+S+I GY
Sbjct: 540 KKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGY 599
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
GC D A +LF +MR+LG+ PN TL ++ A G+V++G H++ + E+ I+PT
Sbjct: 600 ILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPT 659
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H +VDL R+G + +A +FI M + D+ +W SLL +
Sbjct: 660 LDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTA 701
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 197/452 (43%), Gaps = 85/452 (18%)
Query: 21 AYDFSQNNTNIRIRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
A DF + + P+T A SAC+SL+SLQ G ++H + + ++ N +++
Sbjct: 335 ALDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLID 394
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MY KCG LE AR FD + +++V +W +MI G Q A +L++++ +S VMP T
Sbjct: 395 MYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVT 454
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS--G 196
+ ++I C QN D+ +D + G
Sbjct: 455 WNAMISGC--------------------------IQNG------DEDQAMDLFQIMEKDG 482
Query: 197 IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------ 250
+++ SW S+IA + +LG + +AL F +M + PN S+ AC+N
Sbjct: 483 GVKRNTASWNSLIAGYHQLGEKNKALAIFRQM-QSLNFSPNSVTILSILPACANVMAEKK 541
Query: 251 ----------------------------------FARILFNEIDSPDLASWNALIAGVAS 276
++R +FN + S D+ +WN++IAG
Sbjct: 542 IKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYIL 601
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
H ++ A LF +MR+ + P+ T+ S++ A + +G V S I + +P
Sbjct: 602 HGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEE--HQILPT 659
Query: 337 CN---AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
+ A++ +Y + L +A+ +++ D W S++ AC H L L ++ L
Sbjct: 660 LDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTACRFHGNL-NLAVLAAKRL 718
Query: 394 ASQIKPD-HITFNDVMGACAKMASLEMVTQLH 424
+++PD H+ + ++ A A E ++
Sbjct: 719 -HELEPDNHVIYRLLVQAYALYGKFEQTLKVR 749
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
N+AL + Q+ N T ++ AC+++ + + +++H +L + ++ + N
Sbjct: 505 NKALAIFRQMQS-LNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANS 563
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
+++ Y K G+++ +R F+ M +++++W ++IAG + + A +L+ QM G+ P
Sbjct: 564 LVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPN 623
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN-----ALIAMYTKFDRILDA 190
+ T SII A G V GR HV S H I A++ +Y + R+ DA
Sbjct: 624 RGTLASIIHAYGIAGMVDKGR----HVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADA 679
Query: 191 RNVFSGIA-RKDVTSWGSMIAA 211
+ DV+ W S++ A
Sbjct: 680 IEFIEDMPIEPDVSIWTSLLTA 701
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/558 (27%), Positives = 258/558 (46%), Gaps = 61/558 (10%)
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
+ H IL S Q D + ++ Y DA + +P V S++++I ++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+ +I ++ +M G++P ++ K C+ L + G+Q+H S Q
Sbjct: 96 LFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQG 155
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
+L MY + R+ DAR VF ++ KDV + +++ +++ G E + +EM G
Sbjct: 156 SLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGI-- 213
Query: 236 PNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
P++ SWN +++G EA+ +F +M
Sbjct: 214 -------------------------EPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGF 248
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC-------- 347
PD +TV S+L + L G Q+H Y+IK G + V +A+L MY K
Sbjct: 249 CPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIK 308
Query: 348 ---------SVLCNALL-----------------VFKELGKNADSVSWNSIIAACLQHNQ 381
+ +CNA + +FKE + VSW SIIA C Q+ +
Sbjct: 309 LFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGK 368
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
E LF M + +KP+ +T ++ AC +A+L H + + L DV V +
Sbjct: 369 DIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSA 428
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+D+Y KCG + ++ +FN M ++V W+SL+ GY+ G E + +F + + P+
Sbjct: 429 LIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPD 488
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
++ +L+AC VGL +EG + +M EYGI P EH SC+V+LL RAG + EA D I
Sbjct: 489 FISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLI 548
Query: 562 NQMACDADIVVWKSLLAS 579
++ + D VW +LL S
Sbjct: 549 KEIPFEPDSCVWGALLNS 566
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/510 (22%), Positives = 206/510 (40%), Gaps = 138/510 (27%)
Query: 6 VSSLCKQNLYNEALVAYD--FSQNNTNIRIRPSTY--AGLISACSSLRSLQLGRKVHDHI 61
+ +L K L+++++ + FS + P T+ L C+ L + + G+++H
Sbjct: 88 IYALTKAKLFSQSIGVFSRMFSHG-----LIPDTHVLPNLFKVCAELSAFKAGKQIHCVA 142
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR---------------------- 99
+S D +Q + +MY +CG + DAR FD+M ++
Sbjct: 143 CVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVV 202
Query: 100 -------------NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
N+VSW +++G +++ +A+ ++ +M G P Q T S++ +
Sbjct: 203 RILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSV 262
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF------------ 194
++ +GRQ+H +VIK +A++ MY K + +F
Sbjct: 263 GDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCN 322
Query: 195 ---SGIARK--------------------DVTSWGSMIAAFSKLGYELEALCHFNEMLHH 231
+G++R +V SW S+IA ++ G ++EAL F EM
Sbjct: 323 AYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVA 382
Query: 232 GAYQPNEFIFGSVFSACSNFA--------------------------------------- 252
G +PN S+ AC N A
Sbjct: 383 GV-KPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKM 441
Query: 253 -RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
+I+FN + + +L WN+L+ G + H A E MS+F + L PD ++ SLL AC G
Sbjct: 442 SQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSAC-G 500
Query: 312 RLTL------YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
++ L Y M Y IK + + ++ + + L A + KE+ D
Sbjct: 501 QVGLTDEGWKYFNMMSEEYGIKPRLEHY----SCMVNLLGRAGKLQEAYDLIKEIPFEPD 556
Query: 366 SVSWNSIIAAC-LQHN------QAEELFRL 388
S W +++ +C LQ+N A++LF L
Sbjct: 557 SCVWGALLNSCRLQNNVDLAEIAAQKLFHL 586
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 152/354 (42%), Gaps = 54/354 (15%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N +S + + EA++ + Q ++ P T + ++ + +L +GR++H +
Sbjct: 221 NGILSGFNRSGYHKEAVIMF---QKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGY 277
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP----------------------- 97
++ D + + +L+MYGK G + FD+
Sbjct: 278 VIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKA 337
Query: 98 ------------QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
+ NVVSWT++IAGC+QN ++ +A++L+ +M +GV P + T S++ A
Sbjct: 338 LEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPA 397
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
C + ++ GR H ++ + +ALI MY K RI ++ VF+ + K++ W
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCW 457
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEID 260
S++ +S G E + F E L +P+ F S+ SAC FN +
Sbjct: 458 NSLMNGYSMHGKAKEVMSIF-ESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMS 516
Query: 261 -----SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
P L ++ ++ + EA L E+ PD +LL +C
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEI---PFEPDSCVWGALLNSC 567
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 254/517 (49%), Gaps = 46/517 (8%)
Query: 104 WTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI 163
W +I G S +++Y QM++ GV P TF ++KAC+ V GR++H V+
Sbjct: 10 WNTLIRGYSIA-GVGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68
Query: 164 KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL-EAL 222
K S + N L++ Y + DA VF + KD+ SW +MI FS G+ +AL
Sbjct: 69 KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128
Query: 223 CHFNEMLHHGAYQPNEFIFGSVF------------------------------------- 245
F M+ G +PN S
Sbjct: 129 DMFRLMIDEG-LKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDM 187
Query: 246 ---SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
S S A +F ++D+ ++ SWNA+IA A + A+ L +M+D LP+ +T
Sbjct: 188 YAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTF 247
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
++L AC + G ++H+ I MG ++ V NA+ MYAK L A VF +
Sbjct: 248 TNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDTSLR 307
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
D VS+N +I Q + E LFS M +K D+++F + ACA + +++ +
Sbjct: 308 --DEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKE 365
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGC 482
+H ++ + +FV N L+D Y KCG +G AR +F+ M N DV SW+++ILGY G
Sbjct: 366 IHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGE 425
Query: 483 GDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCS 542
D A+ LF MR V + V+ + VL+ACSH GL+E+G + ++ GI PT+ H +
Sbjct: 426 LDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKAR-GIEPTQMHYA 484
Query: 543 CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
C+VDLL RAG + EA + I + D +W +LL +
Sbjct: 485 CMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGA 521
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 223/487 (45%), Gaps = 45/487 (9%)
Query: 31 IRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
I +RP T+ ++ AC+ ++ GR+VH ++ + DV + N +L+ YG CG L D
Sbjct: 35 IGVRPDDHTFPFVLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRD 94
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQN-YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
A FD+MP++++VSW MI S N + DA+ ++ M+ G+ P T S +
Sbjct: 95 AGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLV 154
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
L GR++H I+ S + N+LI MY K +A NVF + K+V SW +
Sbjct: 155 ELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNA 214
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA--------------- 252
MIA F++ +EL A+ +M +G PN F +V AC+
Sbjct: 215 MIANFAQNRFELVAVGLVRQMQDYGEL-PNSVTFTNVLPACARMGLVRPGKEIHARSIHM 273
Query: 253 ----------------------RILFNEIDSP--DLASWNALIAGVASHSNANEAMSLFS 288
++ N D+ D S+N LI G + S+ +E++SLFS
Sbjct: 274 GCAFDLFVSNALTDMYAKSGHLKLARNVFDTSLRDEVSYNILIVGHSQTSDCSESLSLFS 333
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
EM+ L D ++ L AC + QG ++H ++++ F ++ V N++L Y KC
Sbjct: 334 EMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCG 393
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ A +F + N D SWN++I + + LF M ++ D ++F V+
Sbjct: 394 RIGLARNIFDRM-TNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVL 452
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDV 467
AC+ LE + + G+ ++D+ + G + A +L + PD
Sbjct: 453 SACSHGGLLEKGRKYFDELKARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDA 512
Query: 468 VSWSSLI 474
W +L+
Sbjct: 513 NIWGALL 519
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 181/418 (43%), Gaps = 60/418 (14%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++P+ T + + L + GR+VH + + D+ + N +++MY K G +A
Sbjct: 139 LKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEAS 198
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F K+ +NVVSW AMIA +QN E A+ L QM G +P TF +++ AC+ +G
Sbjct: 199 NVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMG 258
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
V G+++HA I L NAL MY K + ARNVF R +V S+ +I
Sbjct: 259 LVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDTSLRDEV-SYNILIV 317
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------- 251
S+ E+L F+EM G Q N G++ SAC+N
Sbjct: 318 GHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGAL-SACANLTAIKQGKEIHGFLLRKLFH 376
Query: 252 ---------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
AR +F+ + + D+ASWN +I G + A+ LF M
Sbjct: 377 IHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENM 436
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
R ++ D ++ ++L AC L +G + + G + ++ + + ++
Sbjct: 437 RKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQMHYACMVDLLGRAGLM 496
Query: 351 CNALLVFKELGKNADSVSWNSIIAAC-------LQHNQAEELFRLFSRMLASQIKPDH 401
A + K L D+ W +++ AC L AE LF ++KP+H
Sbjct: 497 EEAAELIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLF---------ELKPEH 545
>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
Length = 683
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 176/616 (28%), Positives = 280/616 (45%), Gaps = 69/616 (11%)
Query: 9 LCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQP 68
LC QNL AL A D +R+ PS C +L SL R +H LL+ Q
Sbjct: 18 LCVQNL-ARALSAGDL------LRLLPS--------CGTLPSL---RVLHAR-LLTHTQG 58
Query: 69 ----DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
+ + +L+ Y G L ARM FD P+ + S+ M+ Q + +A+ L+
Sbjct: 59 LLLGSLRARTKLLSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVALH 118
Query: 125 IQMLQSGVMP---GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
M + P F +KAC G +LH +K G+ N+L+ MY
Sbjct: 119 QDMRRRRPCPEAQDDFVLSLALKACIRSADYGYGTRLHCDAVKVG-GADGFVMNSLVDMY 177
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K + AR VF I ++V SW SM++ + G+ + L FN+M P+E+
Sbjct: 178 AKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNV-PPSEYTI 236
Query: 242 GSVFSACSNF----------------------------------------ARILFNEIDS 261
+V +ACS A+ +F+E+
Sbjct: 237 ATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSY 296
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
DL W +I G + N +A+ LF + + ++P+ +T+ ++L A L G +
Sbjct: 297 IDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSI 356
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H +K+G V NA++ MYAKC + A +F + N D V+WNS+++ ++N
Sbjct: 357 HGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSI-SNKDVVAWNSMLSGYAENNM 415
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+ LF +M PD I+ + A + L + H Y K +++V
Sbjct: 416 CNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVSTA 475
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+++Y KCG L SAR++F+ M + + V+W ++I GY G ++ LF M GV PN
Sbjct: 476 LLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPN 535
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
V +L+ CSH G+V + M + I P+ +H +C+VD+LARAG + EA +FI
Sbjct: 536 DVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFI 595
Query: 562 NQMACDADIVVWKSLL 577
+ M AD VW + L
Sbjct: 596 DNMPMQADTSVWGAFL 611
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 172/331 (51%), Gaps = 9/331 (2%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP---DGLTVHSLLCA 308
AR++F+ PD S+ ++ + EA++L +MR R P D + L A
Sbjct: 83 ARMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPEAQDDFVLSLALKA 142
Query: 309 CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL-GKNADSV 367
CI G ++H +K+G ++ V N+++ MYAK L A VF+ + G+N V
Sbjct: 143 CIRSADYGYGTRLHCDAVKVG-GADGFVMNSLVDMYAKAGDLECARKVFERIPGRNV--V 199
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
SW S+++ C+Q+ A + LF++M + P T V+ AC+ + L +H +
Sbjct: 200 SWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSV 259
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K GL + F+ L+D+Y+KCG L A+ +F+ + D+V W+++I+GY Q G +AL
Sbjct: 260 IKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDAL 319
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDL 547
+LF + + PN VT+ VL+A + + + G ++ I + G++ + +VD+
Sbjct: 320 RLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAV-KLGLVEYTVVVNALVDM 378
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLA 578
A+ V EA ++ + D+V W S+L+
Sbjct: 379 YAKCQAVSEANRIFGSIS-NKDVVAWNSMLS 408
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 190/419 (45%), Gaps = 59/419 (14%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ PS Y A +I+ACS+L L GR +H ++ + + +L+MY KCG LEDA+
Sbjct: 229 VPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQ 288
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD++ ++V WT MI G +QN DA++L++ + ++P T +++ A + L
Sbjct: 289 CVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLR 348
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ LGR +H +K + + NAL+ MY K + +A +F I+ KDV +W SM++
Sbjct: 349 DLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLS 408
Query: 211 AFSKLGYELEALCHFNEM------------LH-----------------HG-----AYQP 236
+++ +AL F +M +H HG A+
Sbjct: 409 GYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLS 468
Query: 237 NEFIFGSV---FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
N ++ ++ ++ C + AR +F+E++ + +W A+I G ++ ++ LF EM
Sbjct: 469 NIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEML 528
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM-------- 343
+ P+ + S+L C + GM + K FDS N +M
Sbjct: 529 KDGVHPNDVAFTSILSTCS-----HTGMVTAA---KRYFDSMAQHFNITPSMKHYACMVD 580
Query: 344 -YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI-KPD 400
A+ L AL + AD+ W + + C H++ + RM+ +PD
Sbjct: 581 VLARAGNLEEALEFIDNMPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMMVLHPERPD 639
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 235/465 (50%), Gaps = 41/465 (8%)
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+QLHA +I + + N L+ MY+K + A +F + ++++ SW +MI+ S+
Sbjct: 24 GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ 83
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------------- 254
EA+ F M G P +F F S AC++ I
Sbjct: 84 NSKFSEAIRTFCGMRICGEV-PTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELF 142
Query: 255 --------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+F E+ D SW A+I G + EA+ F +M D E
Sbjct: 143 VGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEE 202
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ D + S L AC G VHS ++K+GF+S++ V NA+ MY+K + +A
Sbjct: 203 VTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESAS 262
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
VF + + VS+ +I ++ Q E+ +F + I+P+ TF+ ++ ACA
Sbjct: 263 NVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQ 322
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
A+LE TQLH + K D FV + L+D+Y KCG L A + F+ + +P ++W+SL+
Sbjct: 323 AALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLV 382
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
+ Q G G +A+K F RM GV PN +T + +LT CSH GLVEEGL + M+ YG+
Sbjct: 383 SVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGV 442
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+P EH SCV+DLL RAG + EA++FIN+M + + W S L +
Sbjct: 443 VPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGA 487
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/479 (30%), Positives = 240/479 (50%), Gaps = 45/479 (9%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A +I + + L+ G+++H ++ + P L NH++NMY KCG L+ A FD MPQ
Sbjct: 9 AHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ 68
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
RN+VSWTAMI+G SQN + ++AI+ + M G +P QF F S I+AC+ LGS+ +G+Q+
Sbjct: 69 RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 128
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H +K GS L + L MY+K + DA VF + KD SW +MI +SK+G
Sbjct: 129 HCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEF 188
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFNE--------------- 258
EAL F +M+ ++ + S AC F R + +
Sbjct: 189 EEALLAFKKMIDE-EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNA 247
Query: 259 -------------------IDSP--DLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
IDS ++ S+ LI G + +S+F E+R + + P
Sbjct: 248 LTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEP 307
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+ T SL+ AC + L QG Q+H+ ++K+ FD + V + ++ MY KC +L +A+ F
Sbjct: 308 NEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAF 367
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
E+G + ++WNS+++ QH ++ + F RM+ +KP+ ITF ++ C+ +
Sbjct: 368 DEIG-DPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLV 426
Query: 418 EMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
E + KT G+ + ++D+ + G L A++ N M P+ W S +
Sbjct: 427 EEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 485
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 189/426 (44%), Gaps = 56/426 (13%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRI---RPSTYA--GLISACSSLRSLQLGRKVHDH 60
+S L + + ++EA+ + +RI P+ +A I AC+SL S+++G+++H
Sbjct: 78 ISGLSQNSKFSEAIRTF------CGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCL 131
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
L ++ + +++ +MY KCG++ DA F++MP ++ VSWTAMI G S+ + +A
Sbjct: 132 ALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEA 191
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ + +M+ V Q S + AC L + GR +H+ V+K S + NAL M
Sbjct: 192 LLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDM 251
Query: 181 YTKFDRILDARNVFSGIAR--KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
Y+K + A NVF GI ++V S+ +I + + + L F E+ G +PNE
Sbjct: 252 YSKAGDMESASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG-IEPNE 309
Query: 239 FIFGSVFSACSNFARI----------------------------------------LFNE 258
F F S+ AC+N A + F+E
Sbjct: 310 FTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDE 369
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
I P +WN+L++ H +A+ F M DR + P+ +T SLL C + +G
Sbjct: 370 IGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEG 429
Query: 319 MQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
+ +S G + ++ + + L A + ++ W S + AC
Sbjct: 430 LDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACR 489
Query: 378 QHNQAE 383
H E
Sbjct: 490 IHGDKE 495
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 109/198 (55%), Gaps = 1/198 (0%)
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
L +G Q+H+ +I G+ + N ++ MY+KC L +AL +F + + + VSW ++I+
Sbjct: 21 LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQR-NLVSWTAMIS 79
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF 434
Q+++ E R F M P F+ + ACA + S+EM Q+HC K G+
Sbjct: 80 GLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGS 139
Query: 435 DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR 494
++FV + L D+Y KCG++ A K+F M D VSW+++I GY++ G +EAL F +M
Sbjct: 140 ELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMI 199
Query: 495 SLGVSPNLVTLVGVLTAC 512
V+ + L L AC
Sbjct: 200 DEEVTIDQHVLCSTLGAC 217
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 2/171 (1%)
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
V+ AK L QLH + G F+ N L+++Y KCG L A KLF+ M +
Sbjct: 11 VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
+VSW+++I G +Q EA++ F MR G P + AC+ +G +E G ++
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMH- 129
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ ++GI S + D+ ++ G + +A +M C D V W +++
Sbjct: 130 CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPC-KDEVSWTAMI 179
>gi|449465220|ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Cucumis sativus]
Length = 874
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 164/598 (27%), Positives = 276/598 (46%), Gaps = 94/598 (15%)
Query: 45 CSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD---------- 94
C+S ++ G+++H +L + + N ++NMY KCG L AR+ FD
Sbjct: 242 CASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDSVSC 301
Query: 95 ---------------------KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
KMP+R VS+T MI G +QN +AI+++ M +GV
Sbjct: 302 NIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVA 361
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P + T S++ ACS +G + R LHA VIK ++ L+ MY F + D + +
Sbjct: 362 PNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRL 421
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR 253
F+ + ++ SW M+ + K S + AR
Sbjct: 422 FNEMPVRNTVSWNVMLKGYVK-------------------------------SGLVDQAR 450
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
LF I D+ SW +I G +A+ L+S MR +L P+ + + LL AC +
Sbjct: 451 ELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSV 510
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK--------------- 358
++ +G Q HS I+K GF + I++ YA C + A L ++
Sbjct: 511 SIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIV 570
Query: 359 ---------------ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
++ D SW+++I+ Q+ + LF M+ S+++P+ IT
Sbjct: 571 GFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEIT 630
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
V A A + L H Y+ + + + ++D+Y KCGS+ +A +F ++
Sbjct: 631 MVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIK 690
Query: 464 NPD--VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
+ V W+++I G A G + +L++F+ ++ + N +T +GVL+AC H GLVE G
Sbjct: 691 DKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVG 750
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ M+ ++G+ P +H C+VDLL R G + EAE+ + M AD+V+W +LLAS
Sbjct: 751 ERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLAS 808
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 124/291 (42%), Gaps = 63/291 (21%)
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
L+V S L C + G Q+H+ ++K GF+SN + N+++ MY KC +L +A L+F
Sbjct: 233 LSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDS 292
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSR---------------------------- 391
DSVS N +++ ++ Q E +LF++
Sbjct: 293 CSV-LDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 351
Query: 392 ---MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
M ++ + P+ +T VM AC+ + + LH + K V + L+ +Y
Sbjct: 352 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCV 411
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR---------------- 492
SL ++LFN M + VSW+ ++ GY + G D+A +LF R
Sbjct: 412 FSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGF 471
Query: 493 ---------------MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
MR + PN V +V +L+AC +EEG + ++
Sbjct: 472 VQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLI 522
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 105/241 (43%), Gaps = 34/241 (14%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC----------------- 83
L+SAC S++ GR+ H I+ + +Q I++ Y C
Sbjct: 502 LLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSH 561
Query: 84 --------------GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
G ++ AR FD MP+++V SW+ MI+G +QN + A+ L+ M+
Sbjct: 562 LTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMID 621
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD 189
S V P + T S+ A + LG + GR H +V + A+I MY K I
Sbjct: 622 SKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSIDT 681
Query: 190 ARNVFSGIARK--DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
A +VF I K V+ W ++I + G+ +L F+ L + + N F V SA
Sbjct: 682 ALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSN-LQRRSIKLNSITFLGVLSA 740
Query: 248 C 248
C
Sbjct: 741 C 741
>gi|334187761|ref|NP_197403.2| mitochondrial editing factor 18 [Arabidopsis thaliana]
gi|223635651|sp|P0C8Q8.1|PP394_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g19020, mitochondrial; Flags: Precursor
gi|332005257|gb|AED92640.1| mitochondrial editing factor 18 [Arabidopsis thaliana]
Length = 685
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 175/627 (27%), Positives = 296/627 (47%), Gaps = 107/627 (17%)
Query: 22 YDFSQNNTNIRIRPSTYAGLISA---CSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
+DFS +++ T L+SA C+S + GR++H +L S + + N +LN
Sbjct: 31 FDFSGESSD------TERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLN 84
Query: 79 MYGKCGSLEDA--------------------------RMG-----FDKMPQRNVVSWTAM 107
MY KC L DA R+ FD MP+R+ VS+T +
Sbjct: 85 MYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTL 144
Query: 108 IAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
I G +QN Q ++A++L+ +M G+M + T ++I ACS LG + R L + IK +
Sbjct: 145 IKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKL 204
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
+ L+ MY + DAR +F + +++ +W M+ +SK G +A
Sbjct: 205 EGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQA------ 258
Query: 228 MLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
LF++I D+ SW +I G + +EA+ +
Sbjct: 259 -------------------------EELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYY 293
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD---------------- 331
+EM + P + + LL A + +G+Q+H I+K GFD
Sbjct: 294 TEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVS 353
Query: 332 ---------------SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
++ NA++ + K ++ A VF + + D SWN++I+
Sbjct: 354 NDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT-HDKDIFSWNAMISGY 412
Query: 377 LQHNQAEELFRLFSRMLAS-QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
Q + LF M++S Q+KPD IT V A + + SLE + H Y+ + + +
Sbjct: 413 AQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPN 472
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMEN---PDVVSWSSLILGYAQFGCGDEALKLFTR 492
+ ++D+Y KCGS+ +A +F+ +N + W+++I G A G AL L++
Sbjct: 473 DNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSD 532
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAG 552
++SL + PN +T VGVL+AC H GLVE G + M++++GI P +H C+VDLL +AG
Sbjct: 533 LQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAG 592
Query: 553 CVHEAEDFINQMACDADIVVWKSLLAS 579
+ EA++ I +M AD+++W LL++
Sbjct: 593 RLEEAKEMIKKMPVKADVMIWGMLLSA 619
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 9 LCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSK- 65
+C + A +A D + ++ I+P+ T+ G++SAC ++LG+ + +
Sbjct: 514 ICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHG 573
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-NVVSWTAMIAG 110
+PD+ ++++ GK G LE+A+ KMP + +V+ W +++
Sbjct: 574 IEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSA 619
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/505 (30%), Positives = 265/505 (52%), Gaps = 29/505 (5%)
Query: 85 SLEDARMGFDKMPQR------NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
S+ D R +P++ NV MI S++ + +A +L+ +M + P T
Sbjct: 30 SINDYRTAKISIPRKDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMRE----PDVIT 85
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
+ ++I G + R+L V + +++ A++ Y + ++I DA +F+ +
Sbjct: 86 WTTVISGYIKCGMIEEARRLFDRV---DAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMP 142
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--ARILF 256
K+V SW +MI +++ G A+ F +M N + S+ + C AR LF
Sbjct: 143 NKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVM--SMLAQCGRIEEARRLF 200
Query: 257 NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
+ + D+ SW A+IAG++ + +EA LF M +R ++ + ++++ L L
Sbjct: 201 DRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVV----SWNAMITGYAQNLRLD 256
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+ + + + + ++P N ++T + L A +F E+ K + +SW ++I C
Sbjct: 257 EALDLFERMP----ERDLPSWNTMITGLIQNGDLRRARKLFNEMPKK-NVISWTTMITGC 311
Query: 377 LQHNQAEELFRLFSRMLASQ-IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
+Q ++EE ++FSRML++ KP+ TF V+GAC+ +A L Q+H I+KT
Sbjct: 312 VQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDS 371
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFN--FMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
FV++ L+++Y KCG LG+ARK+F+ D+VSW+ +I YA G G EA+ F M
Sbjct: 372 TFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEM 431
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
R G P+ VT VG+L+ACSH GLVEEGL + + + I+ +H +C+VDL RAG
Sbjct: 432 RKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGR 491
Query: 554 VHEAEDFINQMACDADIVVWKSLLA 578
+ EA FI ++ VW +LLA
Sbjct: 492 LKEAFGFIERLETKPSARVWGALLA 516
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 219/473 (46%), Gaps = 46/473 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +IS ++ R++ D + + +VV ++ Y + + DA F++M
Sbjct: 85 TWTTVISGYIKCGMIEEARRLFDRV---DAKKNVVTWTAMVGGYIRSNKISDAEKLFNEM 141
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P +NVVSW MI G +QN + + A+ L+ +M + V+ ++ +++ + G + R
Sbjct: 142 PNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVV----SWNTVMSMLAQCGRIEEAR 197
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+L + + + +I+ A+IA +K RI +AR +F + ++V SW +MI +++
Sbjct: 198 RLFDRMPERD----VISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNL 253
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVAS 276
EAL F M N I G + + AR LFNE+ ++ SW +I G
Sbjct: 254 RLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQ 313
Query: 277 HSNANEAMSLFSEMRDRE-LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
+ EA+ +FS M P+ T S+L AC L +G QVH I K + +
Sbjct: 314 EGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTF 373
Query: 336 VCNAILTMYAKCSVLCNALLVFKE-LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V +A++ MY+KC L A +F + + D VSWN IIAA H +E F M
Sbjct: 374 VVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRK 433
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA-FDVFVMNG-----------L 442
S KPD +T+ ++ AC+ H + + GL FD V + L
Sbjct: 434 SGFKPDDVTYVGLLSACS-----------HAGLVEEGLKYFDELVKDRSILVREDHYACL 482
Query: 443 MDIYIKCGSLGSARKLFNFME----NPDVVSWSSLILG---YAQFGCGDEALK 488
+D+ CG G ++ F F+E P W +L+ G +A G +A K
Sbjct: 483 VDL---CGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAK 532
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 8/201 (3%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
EAL + + + T+ ++ ACS+L L G++VH I + Q + + +
Sbjct: 319 EALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSAL 378
Query: 77 LNMYGKCGSLEDARMGFDK--MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
+NMY KCG L AR FD QR++VSW +IA + + +AI + +M +SG P
Sbjct: 379 INMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKP 438
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
T+ ++ ACS G V G + ++K S L+ ++ + R + F
Sbjct: 439 DDVTYVGLLSACSHAGLVEEGLKYFDELVKDR--SILVREDHYACLVDLCGRAGRLKEAF 496
Query: 195 SGIARKDVTS----WGSMIAA 211
I R + WG+++A
Sbjct: 497 GFIERLETKPSARVWGALLAG 517
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 244/463 (52%), Gaps = 33/463 (7%)
Query: 118 NDA-IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA 176
ND IK S + F ++++C LGS+ G+Q+H+ +I S N
Sbjct: 43 NDGRIKQAYDTFTSEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNH 102
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
L+ Y+K + + +FS + R++V S+ +I + +LG +LE+
Sbjct: 103 LLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLG-DLES--------------- 146
Query: 237 NEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A+ LF+E+ ++A+WNA+IAG+ +A+SLF EM L
Sbjct: 147 ---------------AQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFL 191
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD T+ S+L C G +L G +VH+ ++K GF+ + V +++ MY K L + +
Sbjct: 192 PDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKL 251
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
K + V+WN++IA Q+ EE+ ++ M + +PD ITF V+ AC+++A+
Sbjct: 252 IKSMPIRT-VVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELAT 310
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L Q+H + K G + + V++ L+ +Y + G L + K F EN DVV WSS+I
Sbjct: 311 LGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAA 370
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y G G+EAL+LF +M L + N VT + +L ACSH GL E+G + +M +Y + P
Sbjct: 371 YGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKP 430
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH +CVVDLL RAG + EAE I M D ++WK+LLA+
Sbjct: 431 RIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAA 473
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 196/454 (43%), Gaps = 78/454 (17%)
Query: 7 SSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKC 66
+SLC N+ + + + I PS ++ L+ +C L SL G++VH I+ S
Sbjct: 39 TSLC-----NDGRIKQAYDTFTSEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGG 93
Query: 67 QPDVVLQNHILNMYGKCGS-------------------------------LEDARMGFDK 95
D + NH+LN Y K G LE A+ FD+
Sbjct: 94 SKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDE 153
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M +RN+ +W AMIAG +Q A+ L+ +M G +P +FT GS+++ C+GL S+ G
Sbjct: 154 MSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAG 213
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+++HA ++K + ++L MY K + D + + + V +W ++IA ++
Sbjct: 214 QEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQN 273
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------------------- 254
G E L +N M+ ++P++ F SV SACS A +
Sbjct: 274 GCPEEVLNQYN-MMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAV 332
Query: 255 -------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
F + ++ D+ W+++IA H EA+ LF +M D ++
Sbjct: 333 VSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKM 392
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ +T SLL AC +G + ++ K + ++ + + L A
Sbjct: 393 EANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAE 452
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
+ + + D + W +++AAC H +AE R+
Sbjct: 453 GMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERI 486
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 144/302 (47%), Gaps = 14/302 (4%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T ++ C+ LRSL G++VH +L + V+ + + +MY K GSL D M
Sbjct: 196 TLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSM 255
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P R VV+W +IAG +QN + + Y M +G P + TF S++ ACS L ++ G+
Sbjct: 256 PIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQ 315
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+HA VIK+ S L ++LI+MY++ + D+ F DV W SMIAA+ G
Sbjct: 316 QIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHG 375
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARILFNEIDSPDLAS 266
EAL F++M + NE F S+ ACS+ F ++ P +
Sbjct: 376 RGEEALELFHQM-EDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEH 434
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
+ ++ + EA + +R + PDG+ +LL AC ++ II
Sbjct: 435 YTCVVDLLGRAGRLEEAEGM---IRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEII 491
Query: 327 KM 328
K+
Sbjct: 492 KL 493
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/341 (39%), Positives = 203/341 (59%), Gaps = 6/341 (1%)
Query: 243 SVFSACSN--FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
++++ C + +AR LF+E+ S D+ +W ALI G + H +A+ L EM L P+
Sbjct: 58 NLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQF 117
Query: 301 TVHSLLCAC--IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
T+ SLL A +G + QG Q+H ++ G+DSNV V AIL MYA+C L A L+F
Sbjct: 118 TLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIF- 176
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
++ + + VSWN++IA + Q ++ F LFS ML +KP H T++ V+ ACA M SLE
Sbjct: 177 DVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLE 236
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
+H + K G FV N L+D+Y K GS+ A+K+F+ + DVVSW+S++ GY+
Sbjct: 237 QGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYS 296
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
Q G G AL+ F M ++PN +T + VLTACSH GL++EG H + +M+ +Y + P
Sbjct: 297 QHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMK-KYNVEPQI 355
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
H +VDLL RAG + A FI++M VW +LL +
Sbjct: 356 SHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGA 396
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 185/385 (48%), Gaps = 43/385 (11%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+ C+ L L G+ +H +L S+ + D+V+QN +LN+Y KCG L AR FD+M R+
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS--VCLGRQL 158
VV+WTA+I G SQ+ + DA+ L +ML+ G+ P QFT S++KA SG+GS V GRQL
Sbjct: 81 VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQL 140
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H ++ + S++ A++ MY + + +A+ +F + K+ SW ++IA +++ G
Sbjct: 141 HGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQG 200
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------------- 251
+A C F+ ML +P F + SV AC++
Sbjct: 201 DKAFCLFSNMLRENV-KPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT 259
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
A+ +F+ + D+ SWN+++ G + H A+ F EM + P+
Sbjct: 260 LLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPN 319
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+T +L AC L +G + K + + ++ + + L A+
Sbjct: 320 DITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFIS 379
Query: 359 ELGKNADSVSWNSIIAACLQHNQAE 383
E+ + W +++ AC H E
Sbjct: 380 EMPIKPTAAVWGALLGACRMHKNME 404
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 170/377 (45%), Gaps = 45/377 (11%)
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
+++K C+ L + G+ +HA ++ S L+ QN L+ +Y K ++ AR +F ++ +
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------- 251
DV +W ++I +S+ +AL EML G +PN+F S+ A S
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIG-LKPNQFTLASLLKAASGVGSTDVLQGR 138
Query: 252 ---------------------------------ARILFNEIDSPDLASWNALIAGVASHS 278
A+++F+ + S + SWNALIAG A
Sbjct: 139 QLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKG 198
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
++A LFS M + P T S+LCAC +L QG VH+ +IK G V N
Sbjct: 199 QGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGN 258
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
+L MYAK + +A VF L K D VSWNS++ QH + + F ML ++I
Sbjct: 259 TLLDMYAKSGSIEDAKKVFDRLAKR-DVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIA 317
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
P+ ITF V+ AC+ L+ + K + + ++D+ + G L A +
Sbjct: 318 PNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQF 377
Query: 459 FNFME-NPDVVSWSSLI 474
+ M P W +L+
Sbjct: 378 ISEMPIKPTAAVWGALL 394
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 152/278 (54%), Gaps = 5/278 (1%)
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
H+LL C L +G +H+ ++ F ++ + N +L +YAKC L A +F E+
Sbjct: 19 HTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMS- 77
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT- 421
+ D V+W ++I QH++ ++ L ML +KP+ T ++ A + + S +++
Sbjct: 78 SRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQG 137
Query: 422 -QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
QLH + G +V+V ++D+Y +C L A+ +F+ M + + VSW++LI GYA+
Sbjct: 138 RQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARK 197
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
G GD+A LF+ M V P T VL AC+ +G +E+G ++ +M ++G
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALM-IKWGEKLVAFV 256
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++D+ A++G + +A+ +++A D+V W S+L
Sbjct: 257 GNTLLDMYAKSGSIEDAKKVFDRLA-KRDVVSWNSMLT 293
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 98/186 (52%), Gaps = 7/186 (3%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
N++ TY+ ++ AC+S+ SL+ G+ VH ++ + + N +L+MY K GS+EDA
Sbjct: 214 NVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDA 273
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
+ FD++ +R+VVSW +M+ G SQ+ A++ + +ML++ + P TF ++ ACS
Sbjct: 274 KKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHA 333
Query: 150 GSVCLGRQLHAHVIK---SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS-W 205
G + GR + K SH + L+ DR A S + K + W
Sbjct: 334 GLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDR---AIQFISEMPIKPTAAVW 390
Query: 206 GSMIAA 211
G+++ A
Sbjct: 391 GALLGA 396
>gi|147843478|emb|CAN82063.1| hypothetical protein VITISV_016431 [Vitis vinifera]
Length = 755
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 159/532 (29%), Positives = 280/532 (52%), Gaps = 7/532 (1%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
++L + VH I K D+ L N ++ Y K G + +A F + NVVS+TAMI+G
Sbjct: 90 VELIKAVHASIF--KLAEDIHLANALIVAYLKLGMVXNAXKVFVGLSCPNVVSYTAMISG 147
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSH 170
+++ +E A++++ +M SG+ +F+F +I+ C L + LG QLHA VIK ++
Sbjct: 148 FAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNY 207
Query: 171 LIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLH 230
NAL+ +Y K + +F + +D+ SW ++I++ K A F +M
Sbjct: 208 TFVSNALMGLYGKCGYLDXVLQLFDEMXHRDIASWNTVISSVVKEMMYERAFELFRDMRR 267
Query: 231 HGAYQPNEFIFGSVF-SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
++ + F ++ +A + A +F+++ + + S+NA+++G + ++A++ F
Sbjct: 268 IDGFRIDHFTLSTILVAAMEDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCR 327
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M + + T +L AC + Q+H +I+K GF SN + A+L M +C
Sbjct: 328 MVEEGVELTDFTXTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGR 387
Query: 350 LCNALLVFKE-LGKNADSVSWNSIIAACLQHNQAEELFRLFSR-MLASQIKPDHITFNDV 407
+ +A +F + + S+ W S+I ++ Q EE LF + L + D + V
Sbjct: 388 MADAQKMFSQGXFXQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDXVASTAV 447
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
+G C +A EM Q+HC+ K+G D+ V N ++ +Y KC ++ A K+FN M D+
Sbjct: 448 LGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMXDAIKVFNVMPAHDI 507
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV--GLVEEGLHLY 525
VSW+ LI G+ GDEAL ++++M G+ P+ VT V +++A H LV+ L+
Sbjct: 508 VSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLF 567
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
M+ Y I PT H + +V +L G + EAE+ IN+M + + VW++LL
Sbjct: 568 LSMKTIYHIDPTVXHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALL 619
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 156/337 (46%), Gaps = 22/337 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S C+ ++AL A+ + + T G+++AC L ++ +++H IL
Sbjct: 306 NAILSGFCQNGEGSKAL-AFFCRMVEEGVELTDFTXTGVLNACGLLMEAKISKQIHGFIL 364
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK--MPQRNVVSWTAMIAGCSQNYQENDA 120
+ ++ +L+M +CG + DA+ F + Q + WT+MI G ++N Q +A
Sbjct: 365 KFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGXFXQSGSIIWTSMICGYARNAQPEEA 424
Query: 121 IKLYIQ-MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
I L+ Q L+ ++ +++ C L +G+Q+H H +KS S L N++I
Sbjct: 425 ISLFCQSQLEGAMVVDXVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIIT 484
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY+K + DA VF+ + D+ SW +IA EAL +++M G +P+
Sbjct: 485 MYSKCSNMXDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGI-KPDTV 543
Query: 240 IFGSVFSAC----SNFA---RILFNEIDS-----PDLASWNALIAGVASHSNANEAMSLF 287
F + SA SN R LF + + P + + +L+ + EA +
Sbjct: 544 TFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVXHYTSLVGVLGYWGLLEEAEEMI 603
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
++M + P+ +LL AC R + +VHS+
Sbjct: 604 NKM---PIEPEASVWRALLDAC--RSWIIHENKVHSF 635
>gi|15223562|ref|NP_176050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173051|sp|Q9FXA9.1|PPR83_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g56570
gi|9954755|gb|AAG09106.1|AC009323_17 Hypothetical protein [Arabidopsis thaliana]
gi|332195289|gb|AEE33410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 611
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/454 (30%), Positives = 239/454 (52%), Gaps = 50/454 (11%)
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
H++A N +++ + K + +AR++F + +DV +W +MI ++ Y A F+EM+
Sbjct: 45 HILATNLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMV 103
Query: 230 HHGAYQPNEFIFGSVFSACSNF-------------------------------------- 251
G PNEF SV +C N
Sbjct: 104 KQGT-SPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVT 162
Query: 252 ---ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM--RDRELLPDGLTVHSLL 306
A ++F +I + +W LI G + + ++ +M + E+ P +T+
Sbjct: 163 MEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRA 222
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
A I +T G Q+H+ +IK GF SN+PV N+IL +Y +C L A F E+ ++ D
Sbjct: 223 SASIDSVT--TGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEM-EDKDL 279
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
++WN++I+ L+ + + E +F R + P+ TF ++ ACA +A+L QLH
Sbjct: 280 ITWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGR 338
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF-NFMENPDVVSWSSLILGYAQFGCGDE 485
I + G +V + N L+D+Y KCG++ ++++F ++ ++VSW+S+++GY G G E
Sbjct: 339 IFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAE 398
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
A++LF +M S G+ P+ + + VL+AC H GLVE+GL + +ME+EYGI P R+ +CVV
Sbjct: 399 AVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVV 458
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
DLL RAG + EA + + +M D W ++L +
Sbjct: 459 DLLGRAGKIGEAYELVERMPFKPDESTWGAILGA 492
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 225/471 (47%), Gaps = 43/471 (9%)
Query: 46 SSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWT 105
SSLR+ + + K + +L +++ Y + G +E+AR FD+MP R+VV+WT
Sbjct: 21 SSLRNAGVESSQNTEYPPYKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWT 80
Query: 106 AMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS 165
AMI G + + A + + +M++ G P +FT S++K+C + + G +H V+K
Sbjct: 81 AMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKL 140
Query: 166 EHGSHLIAQNALIAMYTKFDRILDAR-NVFSGIARKDVTSWGSMIAAFSKLGYELEALCH 224
L NA++ MY ++A +F I K+ +W ++I F+ LG + L
Sbjct: 141 GMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKM 200
Query: 225 FNEMLHHGA----------------------------------YQPNEFIFGSV---FSA 247
+ +ML A +Q N + S+ +
Sbjct: 201 YKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCR 260
Query: 248 CSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
C A+ F+E++ DL +WN LI+ + S+++EA+ +F + +P+ T SL
Sbjct: 261 CGYLSEAKHYFHEMEDKDLITWNTLISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSL 319
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
+ AC L G Q+H I + GF+ NV + NA++ MYAKC + ++ VF E+ +
Sbjct: 320 VAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRN 379
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM-VTQLH 424
VSW S++ H E LF +M++S I+PD I F V+ AC +E + +
Sbjct: 380 LVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFN 439
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++ G+ D + N ++D+ + G +G A +L M PD +W +++
Sbjct: 440 VMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 185/409 (45%), Gaps = 46/409 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCG-SLEDARMGFDK 95
T + ++ +C +++ L G VH ++ + + + N ++NMY C ++E A + F
Sbjct: 113 TLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRD 172
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ +N V+WT +I G + +K+Y QML + ++A + + SV G
Sbjct: 173 IKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTG 232
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+Q+HA VIK S+L N+++ +Y + + +A++ F + KD+ +W ++I+ +
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERS 292
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------------------- 254
EAL F G + PN + F S+ +AC+N A +
Sbjct: 293 DSS-EALLMFQRFESQG-FVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVEL 350
Query: 255 -------------------LFNEI-DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+F EI D +L SW +++ G SH EA+ LF +M
Sbjct: 351 ANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSG 410
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ PD + ++L AC + +G++ + + + G + + + N ++ + + + A
Sbjct: 411 IRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEA 470
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
+ + + D +W +I+ AC H + RL +R + ++KP +
Sbjct: 471 YELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVM-ELKPKMV 518
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 159/316 (50%), Gaps = 24/316 (7%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
N + P + A +S+ S+ G+++H ++ Q ++ + N IL++Y +CG L +A
Sbjct: 208 NAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEA 267
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
+ F +M +++++W +I+ ++ ++A+ ++ + G +P +TF S++ AC+ +
Sbjct: 268 KHYFHEMEDKDLITWNTLISELERS-DSSEALLMFQRFESQGFVPNCYTFTSLVAACANI 326
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSM 208
++ G+QLH + + ++ NALI MY K I D++ VF I R+++ SW SM
Sbjct: 327 AALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSM 386
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS-- 261
+ + GY EA+ F++M+ G +P+ +F +V SAC + + FN ++S
Sbjct: 387 MIGYGSHGYGAEAVELFDKMVSSGI-RPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEY 445
Query: 262 ---PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC--------I 310
PD +N ++ + EA L M PD T ++L AC I
Sbjct: 446 GINPDRDIYNCVVDLLGRAGKIGEAYELVERM---PFKPDESTWGAILGACKAHKHNGLI 502
Query: 311 GRLTLYQGMQVHSYII 326
RL + M++ ++
Sbjct: 503 SRLAARKVMELKPKMV 518
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 169/579 (29%), Positives = 294/579 (50%), Gaps = 54/579 (9%)
Query: 47 SLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTA 106
S ++ + +++H +L+ DVVL ++ +Y G L + F + ++N+ SW +
Sbjct: 60 SCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNS 119
Query: 107 MIAGCSQNYQENDAIKLYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS 165
M++ + + D++ ++L SGV P +TF ++KAC L G ++H V+K
Sbjct: 120 MVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKM 176
Query: 166 --EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALC 223
EH ++ A +LI +Y++F + A VF + +DV SW +MI+ F + G EAL
Sbjct: 177 GFEHDVYVAA--SLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALR 234
Query: 224 HFNEM-----------------------------------LHHGAYQPNEFIFGSVFSAC 248
+ M + HG + + F+ ++ +
Sbjct: 235 VLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHG-LESDVFVSNALINMY 293
Query: 249 SNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
S F R+ +F+ ++ DL SWN++IA + + A+ F EM + PD LTV
Sbjct: 294 SKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVV 353
Query: 304 SLLCACIGRLTLYQ-GMQVHSYIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
SL + G+L+ + G VH ++++ + ++ + NA++ MYAK + A VF++L
Sbjct: 354 SL-ASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQL- 411
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ-IKPDHITFNDVMGACAKMASLEMV 420
+ D +SWN++I Q+ A E ++ M + I P+ T+ ++ A + + +L+
Sbjct: 412 PSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQG 471
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
++H + K L DVFV L+D+Y KCG L A LF + V W+++I
Sbjct: 472 MKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIH 531
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
G G++AL+LF MR+ GV + +T V +L+ACSH GLV+E + M+ EY I P +H
Sbjct: 532 GHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKH 591
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
C+VDL RAG + +A + ++ M AD +W +LLA+
Sbjct: 592 YGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAA 630
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 235/481 (48%), Gaps = 47/481 (9%)
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
F + ++C+ + + +QLHA ++ ++ L+ +Y + + F I
Sbjct: 54 FNLVFRSCTNIN---VAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC---------- 248
RK++ SW SM++A+ + G +++ E+L +P+ + F V AC
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMH 170
Query: 249 ----------------------SNFARI-----LFNEIDSPDLASWNALIAGVASHSNAN 281
S F + +F ++ D+ SWNA+I+G + N
Sbjct: 171 CWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVA 230
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
EA+ + M+ E+ D +TV S+L C + G+ VH Y+IK G +S+V V NA++
Sbjct: 231 EALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALI 290
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
MY+K L +A VF + + D VSWNSIIAA Q++ F ML ++PD
Sbjct: 291 NMYSKFGRLQDAQRVFDGM-EVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDL 349
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITK-TGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
+T + +++ + +H ++ + L D+ + N L+++Y K GS+ AR +F
Sbjct: 350 LTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFE 409
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS-LGVSPNLVTLVGVLTACSHVGLVE 519
+ + DV+SW++LI GYAQ G EA+ + M + PN T V +L A SHVG ++
Sbjct: 410 QLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQ 469
Query: 520 EGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+G+ ++ R+++N + +C++D+ + G + +A ++ + V W ++++
Sbjct: 470 QGMKIHGRLIKN--CLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETS-VPWNAIIS 526
Query: 579 S 579
S
Sbjct: 527 S 527
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 221/452 (48%), Gaps = 47/452 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS+ ++ Y +++ + + +R T+ ++ AC SL G K+H +L
Sbjct: 118 NSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVL 174
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ DV + ++++Y + G++E A F MP R+V SW AMI+G QN +A++
Sbjct: 175 KMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALR 234
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ +M V T S++ C+ V G +H +VIK S + NALI MY+
Sbjct: 235 VLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYS 294
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI-- 240
KF R+ DA+ VF G+ +D+ SW S+IAA+ + + AL F EML G +P+
Sbjct: 295 KFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGM-RPDLLTVV 353
Query: 241 -FGSVFSACSNF--------------------------------------ARILFNEIDS 261
S+F S+ AR +F ++ S
Sbjct: 354 SLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPS 413
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRD-RELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D+ SWN LI G A + A+EA+ ++ M + R ++P+ T S+L A L QGM+
Sbjct: 414 RDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMK 473
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H +IK +V V ++ MY KC L +A+ +F E+ + SV WN+II++ H
Sbjct: 474 IHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQET-SVPWNAIISSLGIHG 532
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
E+ +LF M A +K DHITF ++ AC+
Sbjct: 533 HGEKALQLFKDMRADGVKADHITFVSLLSACS 564
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 182/428 (42%), Gaps = 53/428 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S C+ EAL D +++ T + ++ C+ + G VH +++
Sbjct: 217 NAMISGFCQNGNVAEALRVLD-RMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVI 275
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ DV + N ++NMY K G L+DA+ FD M R++VSW ++IA QN A+
Sbjct: 276 KHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALG 335
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH-GSHLIAQNALIAMY 181
+ +ML G+ P T S+ L +GR +H V++ ++ NAL+ MY
Sbjct: 336 FFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMY 395
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K I AR VF + +DV SW ++I +++ G EA+ +N M PN+ +
Sbjct: 396 AKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTW 455
Query: 242 GSVFSACSNFARI----------------------------------------LFNEIDS 261
S+ A S+ + LF EI
Sbjct: 456 VSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQ 515
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL------ 315
WNA+I+ + H + +A+ LF +MR + D +T SLL AC +
Sbjct: 516 ETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWC 575
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
+ MQ Y IK N+ ++ ++ + L A + + AD+ W +++AA
Sbjct: 576 FDTMQ-KEYRIK----PNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAA 630
Query: 376 CLQHNQAE 383
C H AE
Sbjct: 631 CRIHGNAE 638
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/344 (38%), Positives = 203/344 (59%), Gaps = 3/344 (0%)
Query: 238 EFIFGSVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+++ ++ S CS ++A +F++I +P++ +WN +I G A N A+ L+ +M +
Sbjct: 77 KYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCI 136
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD T LL A + + +G +VHS I+ GF+S V V N ++ MYA C +A
Sbjct: 137 EPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHK 196
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F EL + V+WNS+I + + E LF M ++PD T ++ ACA++
Sbjct: 197 LF-ELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELG 255
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+L + + H Y+ K GL ++ N L+D+Y KCGS+ A K+F+ ME VVSW+SLI+
Sbjct: 256 ALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIV 315
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
G A G G EAL+LF + G+ P+ +T VGVL ACSH G+V+EG ++ M+ EYGI+
Sbjct: 316 GLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIV 375
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P EH C+VDLL RAG V +A +FI M + VVW++LL +
Sbjct: 376 PKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGA 419
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 144/305 (47%), Gaps = 29/305 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY L+ A + L ++ G KVH + + + V +QN +++MY CG E A F+ M
Sbjct: 142 TYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELM 201
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+RN+V+W ++I G + N + N+A+ L+ +M GV P FT S++ AC+ LG++ LGR
Sbjct: 202 AERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGR 261
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+ H +++K +L A NAL+ +Y K I A VF + K V SW S+I + G
Sbjct: 262 RAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNG 321
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVAS 276
+ EAL F E+ G P+E F V ACS+ +
Sbjct: 322 FGKEALELFKELERKG-LMPSEITFVGVLYACSHCGMV---------------------- 358
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
+E F M++ + + + + +GR L + Q H +I M N V
Sbjct: 359 ----DEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVK--QAHEFIQNMPMQPNAVV 412
Query: 337 CNAIL 341
+L
Sbjct: 413 WRTLL 417
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 154/370 (41%), Gaps = 50/370 (13%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
I + C + A F ++ N+ +W MI G +++ A++LY QM S + P
Sbjct: 80 IFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPD 139
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
T+ ++KA + L V G ++H+ I++ S + QN L+ MY A +F
Sbjct: 140 THTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFE 199
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---- 251
+A +++ +W S+I ++ G EAL F EM G +P+ F S+ SAC+
Sbjct: 200 LMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGV-EPDGFTMVSLLSACAELGALA 258
Query: 252 ------------------------------------ARILFNEIDSPDLASWNALIAGVA 275
A +F+E++ + SW +LI G+A
Sbjct: 259 LGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLA 318
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM----GFD 331
+ EA+ LF E+ + L+P +T +L AC + +G Y +M G
Sbjct: 319 VNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGF---DYFKRMKEEYGIV 375
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
+ ++ + + ++ A + + ++V W +++ AC H +R
Sbjct: 376 PKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLA--LGEVAR 433
Query: 392 MLASQIKPDH 401
Q++P H
Sbjct: 434 AQLLQLEPKH 443
>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
Length = 1260
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 158/522 (30%), Positives = 250/522 (47%), Gaps = 47/522 (9%)
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
+V +W I +++ L+ +M + G P FTF + KAC+ L V +H
Sbjct: 622 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 681
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
AH+IKS S + A + M+ K + + A VF + +D T+W +M++ F + G+
Sbjct: 682 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 741
Query: 220 EALCHFNEM---------------LHHGAYQP------------------------NEFI 240
+A F EM + +++ N +I
Sbjct: 742 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 801
Query: 241 FGSVFSACSNF--ARILFNEIDSPD--LASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
S + C + A+++F ID D + SWN++ + A +A L+ M E
Sbjct: 802 --STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFK 859
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD T +L +C TL QG +HS+ I +G D ++ N ++MY+K C+A L+
Sbjct: 860 PDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLL 919
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F ++ + VSW +I+ + +E LF M+ S KPD +T ++ C K S
Sbjct: 920 F-DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGS 978
Query: 417 LEMVTQLHCYITKTGLAFD-VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
LE + G D V + N L+D+Y KCGS+ AR +F+ VV+W+++I
Sbjct: 979 LETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIA 1038
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
GYA G EALKLF++M L PN +T + VL AC+H G +E+G + IM+ Y I
Sbjct: 1039 GYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNIS 1098
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
P +H SC+VDLL R G + EA + I M+ D +W +LL
Sbjct: 1099 PGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALL 1140
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 219/483 (45%), Gaps = 47/483 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ + AC+ L + VH H++ S DV + ++M+ KC S++ A F++M
Sbjct: 660 TFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERM 719
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+R+ +W AM++G Q+ + A L+ +M + + P T ++I++ S S+ L
Sbjct: 720 PERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLE 779
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD--VTSWGSMIAAFSK 214
+HA I+ + N I+ Y K + A+ VF I R D V SW SM A+S
Sbjct: 780 AMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSV 839
Query: 215 LGYELEAL------------------------CHFNEML-----------HHGAYQPNEF 239
G +A C E L H G Q E
Sbjct: 840 FGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEA 899
Query: 240 I--FGSVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
I F S++S + AR+LF+ + S SW +I+G A + +EA++LF M
Sbjct: 900 INTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGE 959
Query: 296 LPDGLTVHSLLCAC--IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
PD +T+ SL+ C G L + + + I D NV +CNA++ MY+KC + A
Sbjct: 960 KPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRD-NVMICNALIDMYSKCGSIHEA 1018
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
+F + V+W ++IA + E +LFS+M+ KP+HITF V+ ACA
Sbjct: 1019 RDIFDNTPEKT-VVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAH 1077
Query: 414 MASLEMVTQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF-NFMENPDVVSWS 471
SLE + H ++ + + ++D+ + G L A +L N PD W
Sbjct: 1078 SGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWG 1137
Query: 472 SLI 474
+L+
Sbjct: 1138 ALL 1140
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 141/287 (49%), Gaps = 19/287 (6%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
ST+ L ++C + +L GR +H H + D+ N ++MY K AR+ FD
Sbjct: 863 STFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDI 922
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M R VSWT MI+G ++ ++A+ L+ M++SG P T S+I C GS+ G
Sbjct: 923 MTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG 982
Query: 156 RQLHAHV-IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
+ + A I +++ NALI MY+K I +AR++F K V +W +MIA ++
Sbjct: 983 KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYAL 1042
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------NFARILFNEIDSP 262
G LEAL F++M+ Y+PN F +V AC+ + + ++N SP
Sbjct: 1043 NGIFLEALKLFSKMIDLD-YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN--ISP 1099
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
L ++ ++ + EA+ L +R+ PD +LL AC
Sbjct: 1100 GLDHYSCMVDLLGRKGKLEEALEL---IRNMSAKPDAGIWGALLNAC 1143
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 177/417 (42%), Gaps = 60/417 (14%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T LI + S +SL+L +H + V + N ++ YGKCG L+ A++ F+ +
Sbjct: 761 TVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAI 820
Query: 97 PQ--RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+ R VVSW +M S + DA LY ML+ P TF ++ +C ++
Sbjct: 821 DRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQ 880
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
GR +H+H I + A N I+MY+K + AR +F + + SW MI+ +++
Sbjct: 881 GRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAE 940
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------- 251
G EAL F+ M+ G +P+ S+ S C F
Sbjct: 941 KGDMDEALALFHAMIKSGE-KPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNV 999
Query: 252 ------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
AR +F+ + +W +IAG A + EA+ LFS+M D
Sbjct: 1000 MICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDL 1059
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQV-----HSYIIKMGFDSNVPVCNAILTMYAKCS 348
+ P+ +T ++L AC +L +G + Y I G D + ++ + +
Sbjct: 1060 DYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDH----YSCMVDLLGRKG 1115
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRLFSRMLASQIK 398
L AL + + + D+ W +++ AC H AE LF L +M A ++
Sbjct: 1116 KLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVE 1172
>gi|255538774|ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551153|gb|EEF52639.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1218
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 166/594 (27%), Positives = 302/594 (50%), Gaps = 61/594 (10%)
Query: 2 SNDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
++ +++ LCK+ NEA+ A + + + ++ P T+ L+ +C S+ LGRKVH H
Sbjct: 42 TDSHLNYLCKKGRLNEAVSALELIAQHGS-KVSPKTFISLLQSCIDCNSVTLGRKVHAHF 100
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
L + + + L+ +++MY KCGSL DAR F +M ++N+ +W+AMI S+ ++ + +
Sbjct: 101 HLVQ-EKNPFLETKLVSMYAKCGSLSDARKLFGEMREKNLYTWSAMIGAFSREHRWKEVV 159
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+L+ M++ +P F I++AC + G +H+ IK + N+++A+Y
Sbjct: 160 ELFYMMMEENCLPDAFLLPKILQACGNSRDIKSGEMVHSLAIKCGVDGYPFVNNSILAVY 219
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP----- 236
K ++ A F + + + +W ++I+ + + G EA F+ M G +P
Sbjct: 220 AKCGKLSLASKCFEMMDKSETAAWNALISGYCQHGQIEEAQRLFDAMREEGI-EPGLVSW 278
Query: 237 NEFIFGSVFSACSNFARILFNEID----SPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
N I G + A L +++ SPD+ +W ++I+G+A + A++A+ LF++M
Sbjct: 279 NILIAGYNQLGYFDIAMELMKKMEVLGTSPDVVTWTSMISGLAQNDKASKALHLFNDMIL 338
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ P+G+T+ S + AC L +G+++H+ +K+GF +V V N+++ MY+KC L N
Sbjct: 339 ARVEPNGVTISSAVSACASLKVLNEGLEIHALAVKLGFVEDVLVGNSLIDMYSKCGKLEN 398
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A VF ++ D +WNS+I Q + LF +M S+ +P+ IT+N+++
Sbjct: 399 AWKVF-DMMPEKDVYTWNSMIGGYCQVGYCGKAHMLFMKMQKSETQPNAITWNNMIWG-- 455
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP-----DV 467
YI G A LF ME D
Sbjct: 456 ---------------------------------YIHNGDEDQAMDLFRRMEEDGKIKRDT 482
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSH---VGLVEEGLHL 524
SW+SLI GY Q G D+AL +F +M+S ++ N VT++ VL AC++ + +V+E +H
Sbjct: 483 ASWNSLISGYLQIGQKDKALSIFRQMQSFSININSVTILSVLPACANLIALKMVKE-IHG 541
Query: 525 YRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
I N ++P + ++D A++G + + ++ A D + W SL+A
Sbjct: 542 CVIRRNLDSLLPI---TNSLIDTYAKSGNIGYSRTIFDR-ALFKDFITWNSLIA 591
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 216/490 (44%), Gaps = 79/490 (16%)
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNY-----QENDAIKLYIQMLQSGVMPGQFTFGS 141
+D F P ++ V +T I NY + N+A+ + Q G TF S
Sbjct: 20 QDTLSAFSTKPTKSSVPFTKKITDSHLNYLCKKGRLNEAVSALELIAQHGSKVSPKTFIS 79
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
++++C SV LGR++HAH + + + + L++MY K + DAR +F + K+
Sbjct: 80 LLQSCIDCNSVTLGRKVHAHFHLVQEKNPFL-ETKLVSMYAKCGSLSDARKLFGEMREKN 138
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------- 250
+ +W +MI AFS+ E + F M+ P+ F+ + AC N
Sbjct: 139 LYTWSAMIGAFSREHRWKEVVELFYMMMEENCL-PDAFLLPKILQACGNSRDIKSGEMVH 197
Query: 251 -----------------------------FARILFNEIDSPDLASWNALIAGVASHSNAN 281
A F +D + A+WNALI+G H
Sbjct: 198 SLAIKCGVDGYPFVNNSILAVYAKCGKLSLASKCFEMMDKSETAAWNALISGYCQHGQIE 257
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
EA LF MR+ + P GL ++L A +L + + +
Sbjct: 258 EAQRLFDAMREEGIEP-GLVSWNILIAGYNQLGYF---------------------DIAM 295
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+ K VL G + D V+W S+I+ Q+++A + LF+ M+ ++++P+
Sbjct: 296 ELMKKMEVL----------GTSPDVVTWTSMISGLAQNDKASKALHLFNDMILARVEPNG 345
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
+T + + ACA + L ++H K G DV V N L+D+Y KCG L +A K+F+
Sbjct: 346 VTISSAVSACASLKVLNEGLEIHALAVKLGFVEDVLVGNSLIDMYSKCGKLENAWKVFDM 405
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
M DV +W+S+I GY Q G +A LF +M+ PN +T ++ H G ++
Sbjct: 406 MPEKDVYTWNSMIGGYCQVGYCGKAHMLFMKMQKSETQPNAITWNNMIWGYIHNGDEDQA 465
Query: 522 LHLYRIMENE 531
+ L+R ME +
Sbjct: 466 MDLFRRMEED 475
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 196/393 (49%), Gaps = 18/393 (4%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+ + LIS ++ +++ D + +P +V N ++ Y + G + A K
Sbjct: 241 AAWNALISGYCQHGQIEEAQRLFDAMREEGIEPGLVSWNILIAGYNQLGYFDIAMELMKK 300
Query: 96 MP----QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
M +VV+WT+MI+G +QN + + A+ L+ M+ + V P T S + AC+ L
Sbjct: 301 MEVLGTSPDVVTWTSMISGLAQNDKASKALHLFNDMILARVEPNGVTISSAVSACASLKV 360
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ G ++HA +K ++ N+LI MY+K ++ +A VF + KDV +W SMI
Sbjct: 361 LNEGLEIHALAVKLGFVEDVLVGNSLIDMYSKCGKLENAWKVFDMMPEKDVYTWNSMIGG 420
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPN-----EFIFGSVFSACSNFARILFNEIDSP---- 262
+ ++GY +A F +M QPN I+G + + + A LF ++
Sbjct: 421 YCQVGYCGKAHMLFMKM-QKSETQPNAITWNNMIWGYIHNGDEDQAMDLFRRMEEDGKIK 479
Query: 263 -DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
D ASWN+LI+G ++A+S+F +M+ + + +T+ S+L AC + L ++
Sbjct: 480 RDTASWNSLISGYLQIGQKDKALSIFRQMQSFSININSVTILSVLPACANLIALKMVKEI 539
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF-KELGKNADSVSWNSIIAACLQHN 380
H +I+ DS +P+ N+++ YAK + + +F + L K D ++WNS+IA +
Sbjct: 540 HGCVIRRNLDSLLPITNSLIDTYAKSGNIGYSRTIFDRALFK--DFITWNSLIAGYVLFG 597
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
++ L +M IKP+ TF+ G K
Sbjct: 598 CSDAALGLVDQMKKLGIKPNRSTFSLAFGDGEK 630
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 60/110 (54%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
+I I T ++ AC++L +L++ +++H ++ + + N +++ Y K G++ +
Sbjct: 512 SININSVTILSVLPACANLIALKMVKEIHGCVIRRNLDSLLPITNSLIDTYAKSGNIGYS 571
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTF 139
R FD+ ++ ++W ++IAG + A+ L QM + G+ P + TF
Sbjct: 572 RTIFDRALFKDFITWNSLIAGYVLFGCSDAALGLVDQMKKLGIKPNRSTF 621
>gi|255559826|ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539898|gb|EEF41477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 757
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 176/587 (29%), Positives = 287/587 (48%), Gaps = 47/587 (8%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+ + ++ ACS L + G+ +H ++ + + N ILN Y KCG L+ A FD
Sbjct: 66 TLFPPVLKACSYLSYID-GKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDS 124
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M R+ VSW +I GC + + +I +G P T +++AC L + G
Sbjct: 125 MRSRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEG 184
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD-ARNVFSGIARKDVTSWGSMIAAFSK 214
QLH ++I+S + QN+ + MY D +D AR +F + KDV SW +MI + +
Sbjct: 185 LQLHGYLIQSGLWASWSVQNSFLCMYADVD--MDCARILFDEMPEKDVISWSAMIGGYVQ 242
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-------------------- 254
+ L F +ML P+ I SV AC+N I
Sbjct: 243 YLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLF 302
Query: 255 --------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+F+E+ + SWN+L++G+ + +EA+ L MR
Sbjct: 303 VKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEG 362
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ D +T+ + L C Y VH I+ G +SN V N+++ YAKC+++ A
Sbjct: 363 IEADEVTLVNCLQICKYFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAW 422
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
VF + D V W+++IA + +E +F +M P+ +T +++ AC+
Sbjct: 423 EVFSRT-RRRDVVLWSTMIAGFAHCGKPDEAIAVFQKMNEGIEVPNAVTIINLLQACSVS 481
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
A L+ H + GLA +V V ++D+Y KCG + ++RK FN + ++++WS++I
Sbjct: 482 AELKRSMWAHGAAIRRGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIITWSTMI 541
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
Y G EAL L +M+S + PN +T + VLTACSH GLVE GL +++ M ++G+
Sbjct: 542 AAYGMNGLAHEALALLAQMKSHEIKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQDHGV 601
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQM--ACDADIVVWKSLLAS 579
P EH SC+VD+L+RAG + +A + I M A VW +LL++
Sbjct: 602 DPEFEHYSCMVDMLSRAGKLDDAMELIRMMPETFRAGASVWGALLSA 648
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 180/398 (45%), Gaps = 46/398 (11%)
Query: 24 FSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYG 81
F + + RI P ++ AC++ ++ +GR VH + D+ ++N +++MY
Sbjct: 253 FQKMLSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYS 312
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
KC A F +MP+RN VSW ++++G N + ++A+ L M G+ + T +
Sbjct: 313 KCKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVN 372
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
++ C + +H I+ S+ I N+LI Y K + I A VFS R+D
Sbjct: 373 CLQICKYFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRD 432
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------ 249
V W +MIA F+ G EA+ F +M + G PN ++ ACS
Sbjct: 433 VVLWSTMIAGFAHCGKPDEAIAVFQKM-NEGIEVPNAVTIINLLQACSVSAELKRSMWAH 491
Query: 250 ----------------------------NFARILFNEIDSPDLASWNALIAGVASHSNAN 281
+R FN+I ++ +W+ +IA + A+
Sbjct: 492 GAAIRRGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNGLAH 551
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAI 340
EA++L ++M+ E+ P+ LT S+L AC + G+ V +I+ G D + +
Sbjct: 552 EALALLAQMKSHEIKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPEFEHYSCM 611
Query: 341 LTMYAKCSVLCNALLVFKELGKN--ADSVSWNSIIAAC 376
+ M ++ L +A+ + + + + A + W ++++AC
Sbjct: 612 VDMLSRAGKLDDAMELIRMMPETFRAGASVWGALLSAC 649
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 157/340 (46%), Gaps = 26/340 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S L Y+EAL+ +S I T + C + VH +
Sbjct: 336 NSLLSGLILNKKYSEALLLV-YSMRTEGIEADEVTLVNCLQICKYFAHPYHCKAVHCATI 394
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
C+ + ++ N +++ Y KC +E A F + +R+VV W+ MIAG + + ++AI
Sbjct: 395 RRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLWSTMIAGFAHCGKPDEAIA 454
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH--VIKSEHGSHLIAQNALIAM 180
++ +M + +P T ++++ACS S L R + AH I+ + + A++ M
Sbjct: 455 VFQKMNEGIEVPNAVTIINLLQACS--VSAELKRSMWAHGAAIRRGLAAEVAVGTAIVDM 512
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y+K I +R F+ I +K++ +W +MIAA+ G EAL +M H +PN
Sbjct: 513 YSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNGLAHEALALLAQMKSH-EIKPNALT 571
Query: 241 FGSVFSACSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ SV +ACS+ F ++ + P+ ++ ++ ++ ++AM L M
Sbjct: 572 YLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPEFEHYSCMVDMLSRAGKLDDAMELIRMM 631
Query: 291 RDRELLPDGLTVH-SLLCAC-------IGRLTLYQGMQVH 322
E G +V +LL AC +G +YQ +++
Sbjct: 632 --PETFRAGASVWGALLSACRTYRSSTLGEKAVYQVLELE 669
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF--VMNGLMDIYIKCGSLGSARK 457
D F V+ AC+ ++ ++ LH + KT AFD F + N +++ YIKCG L +A
Sbjct: 64 DVTLFPPVLKACSYLSYIDGKC-LHACLIKT--AFDSFTSIGNSILNFYIKCGELDTAVS 120
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL 517
+F+ M + D VSW+ LI G +G E L F R G PN+ TLV ++ AC +
Sbjct: 121 VFDSMRSRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRA 180
Query: 518 VEEGLHLY 525
+EGL L+
Sbjct: 181 KQEGLQLH 188
>gi|242041125|ref|XP_002467957.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
gi|241921811|gb|EER94955.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
Length = 650
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 146/477 (30%), Positives = 241/477 (50%), Gaps = 31/477 (6%)
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P +T + AC+ G GRQ+H+H +K G +L +NAL+ MY+ + AR V
Sbjct: 104 PDTYTHPLLAAACAARGDAREGRQVHSHAVKHGFGDNLYLRNALMHMYSACGCVAGARRV 163
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR 253
F D SW +++A + + G +A+ F M A + + + AR
Sbjct: 164 FDAGPVWDAVSWNTILATYVRDGDVEQAVGVFARMPERSAAAVSSMVALFARTGMVEEAR 223
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
+F+ + D +W A+I+ + EA+++FS+MR+ D + S++ AC
Sbjct: 224 GVFDGAEHRDAFTWTAMISCFERNDLFVEALAVFSDMREEGWPVDEAVMVSVVAACAKSE 283
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE-------------- 359
+ G H +++ G S V V NA++ MY+ C + A +F
Sbjct: 284 VIQNGEVCHGLVVRAGLGSRVNVQNALIHMYSSCLDVVAARRLFDSSESLDHFSWNSMIS 343
Query: 360 ----------------LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
+ + D+VSW+++IA C+Q+NQ+ E +F M A +IKPD +T
Sbjct: 344 GYLKNGRVEDAKALFNVMPDKDNVSWSAMIAGCVQNNQSSEALTVFDNMRAHEIKPDEVT 403
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
V+ AC + +LE +H YI + + + L+D+Y+KCG + +A ++F+ +E
Sbjct: 404 LVSVISACTNLCALEQGKLVHEYIRQYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMVE 463
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS-PNLVTLVGVLTACSHVGLVEEGL 522
W+++I+G A G +L +F+ M + G++ P+ +T GVL+AC H GLVEEG
Sbjct: 464 EKGTPCWNAVIVGLAMNGLVTRSLDMFSEMETSGIAVPSEITFTGVLSACRHGGLVEEGR 523
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+++M+N+Y IIP H C+VDLL RAG V EAED I M D+ W +LL +
Sbjct: 524 QFFKLMQNKYQIIPNIRHYGCMVDLLGRAGYVREAEDLIQSMPMSPDVPAWGALLGA 580
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 189/402 (47%), Gaps = 35/402 (8%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
++ ++ + G +E+AR FD R+ +WTAMI+ +N +A+ ++ M + G
Sbjct: 209 MVALFARTGMVEEARGVFDGAEHRDAFTWTAMISCFERNDLFVEALAVFSDMREEGWPVD 268
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
+ S++ AC+ + G H V+++ GS + QNALI MY+ ++ AR +F
Sbjct: 269 EAVMVSVVAACAKSEVIQNGEVCHGLVVRAGLGSRVNVQNALIHMYSSCLDVVAARRLFD 328
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL 255
D SW SMI+ + K G +A FN M P++
Sbjct: 329 SSESLDHFSWNSMISGYLKNGRVEDAKALFNVM-------PDK----------------- 364
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
D SW+A+IAG ++ ++EA+++F MR E+ PD +T+ S++ AC L
Sbjct: 365 -------DNVSWSAMIAGCVQNNQSSEALTVFDNMRAHEIKPDEVTLVSVISACTNLCAL 417
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
QG VH YI + ++ + + +++ MY KC + AL VF ++ + + WN++I
Sbjct: 418 EQGKLVHEYIRQYQYNITIVLGTSLIDMYMKCGCMEAALEVF-DMVEEKGTPCWNAVIVG 476
Query: 376 CLQHNQAEELFRLFSRMLASQIK-PDHITFNDVMGACAKMASLEMVTQLHCYI-TKTGLA 433
+ +FS M S I P ITF V+ AC +E Q + K +
Sbjct: 477 LAMNGLVTRSLDMFSEMETSGIAVPSEITFTGVLSACRHGGLVEEGRQFFKLMQNKYQII 536
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++ ++D+ + G + A L M +PDV +W +L+
Sbjct: 537 PNIRHYGCMVDLLGRAGYVREAEDLIQSMPMSPDVPAWGALL 578
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 157/364 (43%), Gaps = 45/364 (12%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + +L+ EAL + + + +++AC+ +Q G H ++ +
Sbjct: 241 ISCFERNDLFVEALAVFS-DMREEGWPVDEAVMVSVVAACAKSEVIQNGEVCHGLVVRAG 299
Query: 66 CQPDVVLQNHILNMYGKC-------------------------------GSLEDARMGFD 94
V +QN +++MY C G +EDA+ F+
Sbjct: 300 LGSRVNVQNALIHMYSSCLDVVAARRLFDSSESLDHFSWNSMISGYLKNGRVEDAKALFN 359
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
MP ++ VSW+AMIAGC QN Q ++A+ ++ M + P + T S+I AC+ L ++
Sbjct: 360 VMPDKDNVSWSAMIAGCVQNNQSSEALTVFDNMRAHEIKPDEVTLVSVISACTNLCALEQ 419
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+ +H ++ + ++ ++ +LI MY K + A VF + K W ++I +
Sbjct: 420 GKLVHEYIRQYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMVEEKGTPCWNAVIVGLAM 479
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNEID-SPDL 264
G +L F+EM G P+E F V SAC + F +++ N+ P++
Sbjct: 480 NGLVTRSLDMFSEMETSGIAVPSEITFTGVLSACRHGGLVEEGRQFFKLMQNKYQIIPNI 539
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
+ ++ + EA L M + PD +LL AC G +V
Sbjct: 540 RHYGCMVDLLGRAGYVREAEDLIQSM---PMSPDVPAWGALLGACWKHSDSEVGERVGKK 596
Query: 325 IIKM 328
++K+
Sbjct: 597 LVKL 600
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 172/583 (29%), Positives = 293/583 (50%), Gaps = 37/583 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ N+ EA +D N ++A +I+ + L+ R++ +
Sbjct: 83 NTMIAGYLHNNMVEEAHKLFDLMAERDNF-----SWALMITCYTRKGMLEKARELFE--- 134
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
L + D N ++ Y K G +DA F+KMP +++VS+ +M+AG +QN + A+K
Sbjct: 135 LVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMK 194
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ +M + V+ + C LGS + + + ++ ++ +
Sbjct: 195 FFERMAERNVVSWNLMVAGFVNNCD-LGSAW-------ELFEKIPDPNAVSWVTMLCGFA 246
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
+ +I++AR +F + K+V SW +MIAA+ + EA+ F E + I G
Sbjct: 247 RHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMING 306
Query: 243 SVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
V + AR ++N++ D+A+ AL++G+ + +EA +FS++ R D +
Sbjct: 307 YVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKR----DAICW 362
Query: 303 HSLLCACI--GR----LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
+S++ GR L L++ M V N N +++ YA+ + A +
Sbjct: 363 NSMIAGYCQSGRMSEALNLFRQMPV----------KNAVSWNTMISGYAQAGEMDRATEI 412
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F+ +G + +SWNS+I LQ+ + + M KPD TF + +CA +A+
Sbjct: 413 FEAMGVR-NVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAA 471
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L++ QLH I K+G D+FV N L+ +Y KCG + SA K+F +E D++SW+SLI G
Sbjct: 472 LQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISG 531
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
YA G +EA F +M S G P+ VT +G+L+ACSH GL +G+ L++ M + I P
Sbjct: 532 YALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEP 591
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH SC+VDLL R G + EA + + M A+ +W SLLA+
Sbjct: 592 LAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAA 634
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 234/509 (45%), Gaps = 34/509 (6%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N ++ ++ K G + DAR FDKM QRN+VSW MIAG N +A KL+ M +
Sbjct: 52 NSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAER--- 108
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
F++ +I + G + R+L V + NA+IA Y K R DA V
Sbjct: 109 -DNFSWALMITCYTRKGMLEKARELFELVPDKLDTA---CWNAMIAGYAKKGRFDDAEKV 164
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR 253
F + KD+ S+ SM+A +++ G A+ F M N + G V + A
Sbjct: 165 FEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAW 224
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
LF +I P+ SW ++ G A H EA LF DR + ++ ++++ A +
Sbjct: 225 ELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLF----DRMPCKNVVSWNAMIAAYV--- 277
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTM---YAKCSVLCNALLVFKELGKNADSVSWN 370
Q +Q+ +K+ ++ C + TM Y + L A V+ ++ D +
Sbjct: 278 ---QDLQIDE-AVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQM-PYKDVAAKT 332
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM-GACAKMASLEMVTQLHCYITK 429
++++ +Q+ + +E ++FS++ K D I +N ++ G C E + K
Sbjct: 333 ALMSGLIQNGRIDEASQVFSQL----NKRDAICWNSMIAGYCQSGRMSEALNLFRQMPVK 388
Query: 430 TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKL 489
+++ N ++ Y + G + A ++F M +V+SW+SLI G+ Q G +ALK
Sbjct: 389 NAVSW-----NTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKS 443
Query: 490 FTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLA 549
M G P+ T L++C+++ ++ G L+ ++ G I + ++ + A
Sbjct: 444 LVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKS-GYINDLFVSNALIAMYA 502
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ G V AE + D++ W SL++
Sbjct: 503 KCGGVQSAEKVFKDIE-GVDLISWNSLIS 530
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 179/441 (40%), Gaps = 106/441 (24%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
AG ++ C + +L K+ D P+ V +L + + G + +AR FD+MP
Sbjct: 212 AGFVNNCDLGSAWELFEKIPD--------PNAVSWVTMLCGFARHGKIVEARKLFDRMPC 263
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQ-----------MLQSGVMPGQFTFGSIIKACS 147
+NVVSW AMIA Q+ Q ++A+KL+ + M+ V G+ +
Sbjct: 264 KNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQM 323
Query: 148 GLGSVCLGRQLHAHVIKS---EHGSHLIAQ---------NALIAMYTKFDRILDARNVFS 195
V L + +I++ + S + +Q N++IA Y + R+ +A N+F
Sbjct: 324 PYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFR 383
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEM---------------LHHGAY------ 234
+ K+ SW +MI+ +++ G A F M L +G Y
Sbjct: 384 QMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKS 443
Query: 235 ---------QPNEFIFGSVFSACSNFARI------------------------------- 254
+P++ F S+C+N A +
Sbjct: 444 LVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAK 503
Query: 255 ---------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
+F +I+ DL SWN+LI+G A + ANEA F +M +PD +T +
Sbjct: 504 CGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGM 563
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC---NAILTMYAKCSVLCNALLVFKELGK 362
L AC QG+ + +I+ GF P+ + ++ + + L A + + +
Sbjct: 564 LSACSHAGLTNQGVDLFKCMIE-GFAIE-PLAEHYSCLVDLLGRMGRLEEAFNIVRGMKV 621
Query: 363 NADSVSWNSIIAACLQHNQAE 383
A++ W S++AAC H E
Sbjct: 622 KANAGLWGSLLAACRVHKNME 642
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 177/415 (42%), Gaps = 61/415 (14%)
Query: 166 EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHF 225
E ++ QN I K +I +A+ VFS + K+ ++ SM+ F+K G +
Sbjct: 12 EQSKNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSD----- 66
Query: 226 NEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
AR LF+++ +L SWN +IAG ++ EA
Sbjct: 67 --------------------------ARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHK 100
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
LF M +R+ +L+ C R + + + ++ D+ NA++ YA
Sbjct: 101 LFDLMAERDNFS-----WALMITCYTRKGMLEKARELFELVPDKLDT--ACWNAMIAGYA 153
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
K +A VF+++ D VS+NS++A Q+ + + F RM + +++N
Sbjct: 154 KKGRFDDAEKVFEKMPVK-DLVSYNSMLAGYTQNGKMGLAMKFFERMAERNV----VSWN 208
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
++ L +L I V ++ G + + G + ARKLF+ M
Sbjct: 209 LMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCG----FARHGKIVEARKLFDRMPCK 264
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP--NLVTLVGVLTACSHVGLVEEGLH 523
+VVSW+++I Y Q DEA+KLF +P + V+ ++ VG ++E
Sbjct: 265 NVVSWNAMIAAYVQDLQIDEAVKLFKE------TPYKDCVSWTTMINGYVRVGKLDEARE 318
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+Y M Y + + + ++ L + G + EA +Q+ D + W S++A
Sbjct: 319 VYNQM--PYKDVAAK---TALMSGLIQNGRIDEASQVFSQLN-KRDAICWNSMIA 367
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 165/592 (27%), Positives = 280/592 (47%), Gaps = 56/592 (9%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
I +TY +S+ L + H I+L + D+ L + G++ AR
Sbjct: 18 ISKNTYLDFFKRSTSISHLA---QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDI 74
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGLGS 151
F + + +V + ++ G S N + ++ ++ + +S + P T+ I A SG
Sbjct: 75 FLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRD 134
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
GR +H + S L+ + ++ MY KF R+ DAR VF + KD W +MI+
Sbjct: 135 DRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISG 194
Query: 212 FSKLGYELEALCHFNEMLHH------------------------------------GAYQ 235
+ K +E++ F ++++ G Y
Sbjct: 195 YRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYS 254
Query: 236 PNEFIFG--SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
+ + G S++S C LF E PD+ ++NA+I G S+ ++SLF
Sbjct: 255 HDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLF---- 310
Query: 292 DRELLPDGLTVHSL----LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
+EL+ G + S L G L L +H Y +K F S+ V A+ T+Y+K
Sbjct: 311 -KELMLSGARLRSSTLVSLVPVSGHLMLIYA--IHGYCLKSNFLSHASVSTALTTVYSKL 367
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
+ + +A +F E SWN++I+ Q+ E+ LF M S+ P+ +T +
Sbjct: 368 NEIESARKLFDE-SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCI 426
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
+ ACA++ +L + +H + T ++V L+ +Y KCGS+ AR+LF+ M +
Sbjct: 427 LSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNE 486
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
V+W+++I GY G G EAL +F M + G++P VT + VL ACSH GLV+EG ++
Sbjct: 487 VTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNS 546
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M + YG P+ +H +C+VD+L RAG + A FI M+ + VW++LL +
Sbjct: 547 MIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGA 598
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 230/488 (47%), Gaps = 40/488 (8%)
Query: 26 QNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS 85
+ +T+++ STYA ISA S R + GR +H ++ C +++L ++I+ MY K
Sbjct: 110 RKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWR 169
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSGVMPGQFTFGSIIK 144
+EDAR FD+MP+++ + W MI+G +N ++I+++ ++ +S T I+
Sbjct: 170 VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
A + L + LG Q+H+ K+ SH I++Y+K +I +F + D+ +
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVA 289
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGA---------------------------YQPN 237
+ +MI ++ G +L F E++ GA + N
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSN 349
Query: 238 EFIFGSVFSACSNF---------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
SV +A + AR LF+E L SWNA+I+G + +A+SLF
Sbjct: 350 FLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFR 409
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
EM+ E P+ +T+ +L AC L G VH + F+S++ V A++ MYAKC
Sbjct: 410 EMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCG 469
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ A +F + K + V+WN++I+ H Q +E +F ML S I P +TF V+
Sbjct: 470 SIAEARRLFDLMTKK-NEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVL 528
Query: 409 GACAKMASLEMVTQL-HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPD 466
AC+ ++ ++ + I + G V ++DI + G L A + M P
Sbjct: 529 YACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPG 588
Query: 467 VVSWSSLI 474
W +L+
Sbjct: 589 SSVWETLL 596
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 193/444 (43%), Gaps = 47/444 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S K +Y E++ + N + R+ +T ++ A + L+ L+LG ++H
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLAT 248
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ C + +++Y KCG ++ F + + ++V++ AMI G + N + ++
Sbjct: 249 KTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLS 308
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ +++ SG T S++ G + L +H + +KS SH AL +Y+
Sbjct: 309 LFKELMLSGARLRSSTLVSLVPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYS 365
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + I AR +F K + SW +MI+ +++ G +A+ F EM + PN
Sbjct: 366 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM-QKSEFSPNPVTIT 424
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
+ SAC+ AR LF+ +
Sbjct: 425 CILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK 484
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV- 321
+ +WN +I+G H EA+++F EM + + P +T +L AC + +G ++
Sbjct: 485 NEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIF 544
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
+S I + GF+ +V ++ + + L AL + + S W +++ AC H
Sbjct: 545 NSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKD 604
Query: 382 AEELFRLFSRMLASQIKPDHITFN 405
L R S L ++ PD++ ++
Sbjct: 605 T-NLARTVSEKLF-ELDPDNVGYH 626
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 179/595 (30%), Positives = 298/595 (50%), Gaps = 57/595 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILL----SKCQPDVVLQNHILNMYGKCGSLEDARMG 92
T+ LI+A S S+ G V + +L S D+ + + +++ + + G +DA+
Sbjct: 755 TFGSLITAACS--SVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNI 812
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F++M RNVVS ++ G + Q A K++ +M + V ++ ++ A S +
Sbjct: 813 FEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSDSYVVLLSAFSEFSVL 871
Query: 153 ----CLGRQLHAHVIKSEHGSHLIA-QNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
GR++HAHVI++ + +A N L+ MY K I DA +VF + KD SW S
Sbjct: 872 EEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNS 931
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE--------- 258
+I+ + +A F M G+ P+ F S S+C++ I+ E
Sbjct: 932 LISGLDQNECSEDAAESFLRMRRTGS-MPSNFTLISTLSSCASLGWIMLGEQIHCDGLKL 990
Query: 259 -IDSP------------------------------DLASWNALIAGVA-SHSNANEAMSL 286
+D+ D SWN++I ++ S ++ ++A+
Sbjct: 991 GLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKY 1050
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTMYA 345
F EM +T ++L A + L+L++ Q+H+ ++K + + NA+L+ Y
Sbjct: 1051 FLEMMRGGWGLSRVTFINILSA-VSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYG 1109
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
KC + +F + + D VSWNS+I+ + + + L M+ + D TF
Sbjct: 1110 KCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFA 1169
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
V+ ACA +A+LE ++H + + DV V + L+D+Y KCG + A + F M
Sbjct: 1170 TVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLR 1229
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT-LVGVLTACSHVGLVEEGLHL 524
+V SW+S+I GYA+ G G++ALKLFTRM G P+ V L+GVL+ACSHVG VEEG
Sbjct: 1230 NVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEH 1289
Query: 525 YRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++ M Y + P EH SC+VDLL RAG + E DFIN M ++++W+++L +
Sbjct: 1290 FKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGA 1344
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 166/609 (27%), Positives = 291/609 (47%), Gaps = 59/609 (9%)
Query: 25 SQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCG 84
S NT + T+ LI+ + R++H + ++ L N ++N+Y + G
Sbjct: 534 SHCNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIG 593
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
L A+ FD+M RN+V+W +I+G +QN + ++A + M+++G +P + FGS ++
Sbjct: 594 DLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALR 653
Query: 145 AC--SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK-FDRILDARNVFSGIARKD 201
AC SG LG Q+H + K+ +GS ++ N LI+MY D DAR+VF I ++
Sbjct: 654 ACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRN 713
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHG---AYQPNEFIFGSVFSAC---------- 248
SW S+I+ +S+ G + A F+ M G +++PNE+ FGS+ +A
Sbjct: 714 SISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCV 773
Query: 249 ------------------------SNFARI--------LFNEIDSPDLASWNALIAGVAS 276
S FAR +F ++ ++ S N L+ G+
Sbjct: 774 LEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVK 833
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ-----GMQVHSYIIKMGFD 331
A +F EM+D L+ + +L + ++ + G +VH+++I+ G +
Sbjct: 834 QKQGEAAAKVFHEMKD--LVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLN 891
Query: 332 SN-VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
N V + N ++ MYAK + +A VF EL DSVSWNS+I+ Q+ +E+ F
Sbjct: 892 DNKVAIGNGLVNMYAKSGAIADACSVF-ELMVEKDSVSWNSLISGLDQNECSEDAAESFL 950
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
RM + P + T + +CA + + + Q+HC K GL DV V N L+ +Y + G
Sbjct: 951 RMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETG 1010
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCG-DEALKLFTRMRSLGVSPNLVTLVGVL 509
K+F+ M D VSW+S+I + +A+K F M G + VT + +L
Sbjct: 1011 CFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINIL 1070
Query: 510 TACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
+A S + L E ++ ++ +Y + + ++ + G ++E E +M+ D
Sbjct: 1071 SAVSSLSLHEVSHQIHALVL-KYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRD 1129
Query: 570 IVVWKSLLA 578
V W S+++
Sbjct: 1130 EVSWNSMIS 1138
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 237/494 (47%), Gaps = 52/494 (10%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRK----VHDHILLSKCQPD-VVLQNHILNMYGKCGS 85
+ I +Y L+SA S L+ GR+ VH H++ + + V + N ++NMY K G+
Sbjct: 851 VGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGA 910
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
+ DA F+ M +++ VSW ++I+G QN DA + +++M ++G MP FT S + +
Sbjct: 911 IADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSS 970
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
C+ LG + LG Q+H +K + + NAL+A+Y + + VFS + D SW
Sbjct: 971 CASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSW 1030
Query: 206 GSMIAAFSKLGYEL-EALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------ 252
S+I A S + +A+ +F EM+ G + + F ++ SA S+ +
Sbjct: 1031 NSVIGALSDSEASVSQAVKYFLEMM-RGGWGLSRVTFINILSAVSSLSLHEVSHQIHALV 1089
Query: 253 -----------------------------RILFNEIDSPDLASWNALIAGVASHSNANEA 283
+I ++ D SWN++I+G + ++A
Sbjct: 1090 LKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKA 1149
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
M L M + D T ++L AC TL +GM+VH+ I+ +S+V V +A++ M
Sbjct: 1150 MDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDM 1209
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
Y+KC + A F EL + SWNS+I+ +H E+ +LF+RM+ PDH+
Sbjct: 1210 YSKCGRIDYASRFF-ELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVA 1268
Query: 404 -FNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
V+ AC+ + +E + +++ L+ V + ++D+ + G L N
Sbjct: 1269 PLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINS 1328
Query: 462 ME-NPDVVSWSSLI 474
M P+V+ W +++
Sbjct: 1329 MPMKPNVLIWRTVL 1342
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 100/188 (53%), Gaps = 13/188 (6%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
R+ T+A ++SAC+S+ +L+ G +VH + + + DVV+ + +++MY KCG ++ A
Sbjct: 1162 RLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASR 1221
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT-FGSIIKACSGLG 150
F+ MP RNV SW +MI+G +++ A+KL+ +M+ G P ++ ACS +G
Sbjct: 1222 FFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVG 1281
Query: 151 SVCLG-------RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
V G +++ + EH S ++ L+ K D + D N S + +V
Sbjct: 1282 FVEEGFEHFKSMSEVYRLSPRVEHFSCMV---DLLGRAGKLDEVGDFIN--SMPMKPNVL 1336
Query: 204 SWGSMIAA 211
W +++ A
Sbjct: 1337 IWRTVLGA 1344
>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 162/582 (27%), Positives = 282/582 (48%), Gaps = 47/582 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++ ACS+ S LG +H ++ CQ + N ++ Y K G L+ A+ FD ++
Sbjct: 54 ILKACSN-TSFNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKD 112
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
VSW M+ G N + +I+ + P + +I+A L G H
Sbjct: 113 SVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHG 172
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYEL 219
++ +S + L QN+L+++Y + A +F ++ R DV SW MI F ++G +
Sbjct: 173 YIFRSGFSAILSVQNSLLSLYAEVHMYF-AYKLFGEMSVRNDVVSWSVMIGGFVQIGEDE 231
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------------- 254
+ F M+ P+ SV AC+N I
Sbjct: 232 QGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSL 291
Query: 255 ---------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
F EI ++ SWN +++ + + EA++L M D
Sbjct: 292 IDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDE 351
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+T+ ++L L + VH II+ G++SN + N+++ YAKC+++ A +VF
Sbjct: 352 VTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDG 411
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
+ K D V+W+++IA ++ + +E +F +M ++ P++++ ++M ACA A L
Sbjct: 412 MNKK-DVVAWSTMIAGFARNGKPDEAISVFKQM-NEEVIPNNVSIMNLMEACAVSAELRQ 469
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
H + GLA +V + ++D+Y KCG + ++ + FN + +VV WS++I +
Sbjct: 470 SKWAHGIAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRI 529
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTRE 539
G EAL LF +++ G PN VT + +L+ACSH GL+EEGL + M ++GI P E
Sbjct: 530 NGLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLE 589
Query: 540 HCSCVVDLLARAGCVHEAEDFINQMA--CDADIVVWKSLLAS 579
H SC+VD+L+RAG +EA + I ++ +A +W +LL+S
Sbjct: 590 HYSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSS 631
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 189/406 (46%), Gaps = 47/406 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T ++ AC++L+ + LG VH ++ + D+ + N +++MY KC ++ A F ++
Sbjct: 252 TVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEI 311
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P++N++SW M++ N +A+ L M++ G + T ++++ R
Sbjct: 312 PEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCR 371
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H +I+ + S+ + N++I Y K + + AR VF G+ +KDV +W +MIA F++ G
Sbjct: 372 SVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNG 431
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
EA+ F +M + PN ++ AC+ A +
Sbjct: 432 KPDEAISVFKQM--NEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVAIG 489
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
FN+I ++ W+A+I+ + A+EA+ LF +++
Sbjct: 490 TSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTK 549
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ +T SLL AC + +G+ + ++ K G + + + I+ M ++ AL
Sbjct: 550 PNAVTALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALE 609
Query: 356 VFKELGKNADSVS--WNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
+ ++L K ++ + W +++++C + SR+L Q++P
Sbjct: 610 LIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVL--QLEP 653
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 6/193 (3%)
Query: 24 FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
F Q N + + L+ AC+ L+ + H + +V + I++MY KC
Sbjct: 440 FKQMNEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVAIGTSIIDMYSKC 499
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G +E + F+++PQ+NVV W+AMI+ N ++A+ L+ ++ Q+G P T S++
Sbjct: 500 GDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLL 559
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHG-----SHLIAQNALIAMYTKFDRILDARNVFSGIA 198
ACS G + G +++ +HG H +++ KF+ L+
Sbjct: 560 SACSHGGLIEEGLSFFTSMVQ-KHGIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEM 618
Query: 199 RKDVTSWGSMIAA 211
+ WG+++++
Sbjct: 619 EAGASIWGTLLSS 631
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 163/502 (32%), Positives = 250/502 (49%), Gaps = 44/502 (8%)
Query: 120 AIKLY-IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
AI+L I +L M + +++A + S+ G QLHA ++K GS + N LI
Sbjct: 183 AIQLRAIDLLGFLPMERRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLI 242
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
MY K ++ A VF G+ ++V SW +++ F G E L F EM G PNE
Sbjct: 243 DMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGT-SPNE 301
Query: 239 FIFGSVFSAC--------------------------------------SNFARILFNEID 260
F + AC + AR +F+ I
Sbjct: 302 FTLSATLKACGGGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIP 361
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDR-ELLPDGLTVHSLLCACIGRLTLYQGM 319
S +LA+WN++I+G A +++ +F EM+ R + PD T SLL AC G +G
Sbjct: 362 SRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGA 421
Query: 320 QVHSYIIKMGFD--SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
QVH+ + G SN + A+L +Y KC L A+ VF L + +++ W ++I
Sbjct: 422 QVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERR-NAIQWTTVIVGHA 480
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
Q Q +E LF R +S ++ D + V+ A A +E Q+HCY KT DV
Sbjct: 481 QEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVS 540
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
V N L+D+Y+KCG G A + F M +VVSW+++I G + G G EA+ LF M++ G
Sbjct: 541 VANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEG 600
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
V + V + +L+ACSH GLV+E + + + + P EH +C+VDLL RAG + EA
Sbjct: 601 VEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREA 660
Query: 558 EDFINQMACDADIVVWKSLLAS 579
++ I M + + VW++LL++
Sbjct: 661 KELILSMPMEPTVGVWQTLLSA 682
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 217/488 (44%), Gaps = 53/488 (10%)
Query: 34 RPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
R A L+ A + SL+ G ++H ++ D +L N++++MY KCG L A F
Sbjct: 199 RRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVF 258
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
D MP+RNVVSWTA++ G + + + ++L+ +M SG P +FT + +KAC G
Sbjct: 259 DGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTR 316
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
G Q+H +++ H + N+L+ MY+K DAR VF I +++ +W SMI+ ++
Sbjct: 317 AGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYA 376
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------- 251
G ++L F EM QP+EF F S+ ACS
Sbjct: 377 HAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPAS 436
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
A +F+ ++ + W +I G A EAM LF
Sbjct: 437 NAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFW 496
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ DG + S++ + QG QVH Y K +V V N+++ MY KC +
Sbjct: 497 SSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTG 556
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A F+E+ + VSW ++I +H E LF M A ++ D + + ++ AC
Sbjct: 557 EAGRRFREMPAR-NVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSAC 615
Query: 412 AKMASLEMVTQLHCYITK----TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPD 466
+ +V + Y ++ + ++D+ + G L A++L M P
Sbjct: 616 SHSG---LVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPT 672
Query: 467 VVSWSSLI 474
V W +L+
Sbjct: 673 VGVWQTLL 680
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 155/352 (44%), Gaps = 18/352 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S ++L+ + Q + + T+A L+ ACS L + + G +VH +
Sbjct: 369 NSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMA 428
Query: 63 LSKCQP--DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ P + +L +L++Y KC L A FD + +RN + WT +I G +Q Q +A
Sbjct: 429 VRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEA 488
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ L+ + SGV S++ + V G+Q+H + K+ G + N+L+ M
Sbjct: 489 MCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDM 548
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K +A F + ++V SW +MI K G+ EA+ F EM G + +E
Sbjct: 549 YLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGV-EADEVA 607
Query: 241 FGSVFSACSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ ++ SACS+ F+RI + P + ++ + EA L M
Sbjct: 608 YLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSM 667
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
+ P +LL AC + G +V ++ + D + PV +L+
Sbjct: 668 ---PMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAV--DGDNPVNYVMLS 714
>gi|414864687|tpg|DAA43244.1| TPA: hypothetical protein ZEAMMB73_488594 [Zea mays]
Length = 658
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 157/530 (29%), Positives = 254/530 (47%), Gaps = 50/530 (9%)
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
S +P ++ +HI G +++A F + MI G + DA+
Sbjct: 55 SAPRPKSLVLSHI-----AAGRMDEAADAFAGVSSPGAFLHNVMIRGFADAGLPLDALAA 109
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
Y ML + P +FTF ++K C+ G++ GR HA VIK G+ + N+L+A+Y K
Sbjct: 110 YRAMLAASARPDRFTFPVVVKCCTRAGALGEGRAAHAAVIKLGLGADMYTANSLVALYAK 169
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM--------------- 228
+ DA VF G+ +D+ SW +M+ + G AL F +M
Sbjct: 170 LGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFRDMNDALRVRHDGVGVIA 229
Query: 229 ---------------------LHHGAYQPNEFIFGS----VFSACSN--FARILFNEIDS 261
+ HG Q + G+ ++ C N +A +F +
Sbjct: 230 ALAACCLESALAQGREIHGYAIRHGLEQ--DVKVGTSLVDMYCKCGNVLYAENVFATMLL 287
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
+ +WN LI G A + +A F +MR + +T +LL AC + G V
Sbjct: 288 RTVVTWNCLIGGYALNERPVDAFDCFMQMRAEGFQVEAVTAINLLAACGQTESSLYGRSV 347
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H+Y+++ F +V + A+L MY + ++ +F ++ + V+WN++IAA +
Sbjct: 348 HAYVVRRHFLPHVVLETALLEMYGNVGKVESSEKIFGQMTEKT-VVTWNNMIAAYIYMEM 406
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+E LF +L + PD+ T V+ A + SL Q+H YI K G +MN
Sbjct: 407 YQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSLRQCRQMHSYIIKLGYGDSTLIMNA 466
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
+M +Y +CG + ++R++F+ M DV+SW+++I+GYA G G AL++F M+ G+ PN
Sbjct: 467 VMHMYARCGDIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKTALEMFDEMKCNGIEPN 526
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
T V VLTACS GL EG + M++EYG++P EH C+ DLL RA
Sbjct: 527 ESTFVSVLTACSVSGLETEGWKEFNSMQHEYGMVPQIEHYGCMTDLLGRA 576
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 195/430 (45%), Gaps = 61/430 (14%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP T+ ++ C+ +L GR H ++ D+ N ++ +Y K G + DA
Sbjct: 119 RPDRFTFPVVVKCCTRAGALGEGRAAHAAVIKLGLGADMYTANSLVALYAKLGLVGDAER 178
Query: 92 GFDKMPQRNVVSWTAMIAGCSQN----------YQENDAIKLYIQMLQSGVMPGQFTFGS 141
FD MP R++VSW M+ G N NDA++ ++ GV+ +
Sbjct: 179 VFDGMPARDIVSWNTMVDGYVSNGMGALALACFRDMNDALR--VRHDGVGVI-------A 229
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
+ AC ++ GR++H + I+ + +L+ MY K +L A NVF+ + +
Sbjct: 230 ALAACCLESALAQGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVLYAENVFATMLLRT 289
Query: 202 VTSWGSMIAAFS----------------KLGYELEALCHFNEMLHHGAYQ---------- 235
V +W +I ++ G+++EA+ N + G +
Sbjct: 290 VVTWNCLIGGYALNERPVDAFDCFMQMRAEGFQVEAVTAINLLAACGQTESSLYGRSVHA 349
Query: 236 --------PNEFIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANE 282
P+ + ++ N ++ +F ++ + +WN +IA E
Sbjct: 350 YVVRRHFLPHVVLETALLEMYGNVGKVESSEKIFGQMTEKTVVTWNNMIAAYIYMEMYQE 409
Query: 283 AMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
A++LF E+ ++ L PD T+ +++ A + +L Q Q+HSYIIK+G+ + + NA++
Sbjct: 410 AIALFLELLNQPLYPDYFTMTTVVPAFVLLGSLRQCRQMHSYIIKLGYGDSTLIMNAVMH 469
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHI 402
MYA+C + + +F ++ D +SWN+II H Q + +F M + I+P+
Sbjct: 470 MYARCGDIVASREIFDKM-PGKDVISWNTIIIGYAIHGQGKTALEMFDEMKCNGIEPNES 528
Query: 403 TFNDVMGACA 412
TF V+ AC+
Sbjct: 529 TFVSVLTACS 538
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 119/220 (54%), Gaps = 1/220 (0%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
++ T L++AC S GR VH +++ P VVL+ +L MYG G +E +
Sbjct: 320 GFQVEAVTAINLLAACGQTESSLYGRSVHAYVVRRHFLPHVVLETALLEMYGNVGKVESS 379
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F +M ++ VV+W MIA +AI L++++L + P FT +++ A L
Sbjct: 380 EKIFGQMTEKTVVTWNNMIAAYIYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLL 439
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
GS+ RQ+H+++IK +G + NA++ MY + I+ +R +F + KDV SW ++I
Sbjct: 440 GSLRQCRQMHSYIIKLGYGDSTLIMNAVMHMYARCGDIVASREIFDKMPGKDVISWNTII 499
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
++ G AL F+EM +G +PNE F SV +ACS
Sbjct: 500 IGYAIHGQGKTALEMFDEMKCNG-IEPNESTFVSVLTACS 538
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 146/328 (44%), Gaps = 43/328 (13%)
Query: 24 FSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYG 81
F N +R+R ++AC +L GR++H + + + DV + +++MY
Sbjct: 211 FRDMNDALRVRHDGVGVIAALAACCLESALAQGREIHGYAIRHGLEQDVKVGTSLVDMYC 270
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
KCG++ A F M R VV+W +I G + N + DA ++QM G T +
Sbjct: 271 KCGNVLYAENVFATMLLRTVVTWNCLIGGYALNERPVDAFDCFMQMRAEGFQVEAVTAIN 330
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
++ AC S GR +HA+V++ H++ + AL+ MY ++ + +F + K
Sbjct: 331 LLAACGQTESSLYGRSVHAYVVRRHFLPHVVLETALLEMYGNVGKVESSEKIFGQMTEKT 390
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA-------------- 247
V +W +MIAA+ + EA+ F E+L+ Y P+ F +V A
Sbjct: 391 VVTWNNMIAAYIYMEMYQEAIALFLELLNQPLY-PDYFTMTTVVPAFVLLGSLRQCRQMH 449
Query: 248 ------------------------CSNF--ARILFNEIDSPDLASWNALIAGVASHSNAN 281
C + +R +F+++ D+ SWN +I G A H
Sbjct: 450 SYIIKLGYGDSTLIMNAVMHMYARCGDIVASREIFDKMPGKDVISWNTIIIGYAIHGQGK 509
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCAC 309
A+ +F EM+ + P+ T S+L AC
Sbjct: 510 TALEMFDEMKCNGIEPNESTFVSVLTAC 537
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 158/350 (45%), Gaps = 8/350 (2%)
Query: 233 AYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
A +P + + + + A F + SP N +I G A +A++ + M
Sbjct: 56 APRPKSLVLSHIAAGRMDEAADAFAGVSSPGAFLHNVMIRGFADAGLPLDALAAYRAMLA 115
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
PD T ++ C L +G H+ +IK+G +++ N+++ +YAK ++ +
Sbjct: 116 ASARPDRFTFPVVVKCCTRAGALGEGRAAHAAVIKLGLGADMYTANSLVALYAKLGLVGD 175
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM-LASQIKPDHITFNDVMGAC 411
A VF + D VSWN+++ + + F M A +++ D + + AC
Sbjct: 176 AERVFDGMPAR-DIVSWNTMVDGYVSNGMGALALACFRDMNDALRVRHDGVGVIAALAAC 234
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
++L ++H Y + GL DV V L+D+Y KCG++ A +F M VV+W+
Sbjct: 235 CLESALAQGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVLYAENVFATMLLRTVVTWN 294
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV--GLVEEGLHLYRIME 529
LI GYA +A F +MR+ G VT + +L AC L +H Y +
Sbjct: 295 CLIGGYALNERPVDAFDCFMQMRAEGFQVEAVTAINLLAACGQTESSLYGRSVHAYVVRR 354
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ +P + ++++ G V +E QM + +V W +++A+
Sbjct: 355 H---FLPHVVLETALLEMYGNVGKVESSEKIFGQMT-EKTVVTWNNMIAA 400
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N+ +++ +Y EA+ + N + T ++ A L SL+ R++H +I+
Sbjct: 395 NNMIAAYIYMEMYQEAIALF-LELLNQPLYPDYFTMTTVVPAFVLLGSLRQCRQMHSYII 453
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ N +++MY +CG + +R FDKMP ++V+SW +I G + + Q A++
Sbjct: 454 KLGYGDSTLIMNAVMHMYARCGDIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKTALE 513
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACS 147
++ +M +G+ P + TF S++ ACS
Sbjct: 514 MFDEMKCNGIEPNESTFVSVLTACS 538
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 158/488 (32%), Positives = 243/488 (49%), Gaps = 43/488 (8%)
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
M + +++A + S+ G QLHA ++K GS + N LI MY K ++ A
Sbjct: 1 MERRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGE 60
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC---- 248
VF G+ ++V SW +++ F G E L F EM G PNEF + AC
Sbjct: 61 VFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGT-SPNEFTLSATLKACGGGT 119
Query: 249 ----------------------------------SNFARILFNEIDSPDLASWNALIAGV 274
+ AR +F+ I S +LA+WN++I+G
Sbjct: 120 RAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGY 179
Query: 275 ASHSNANEAMSLFSEMRDR-ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD-- 331
A +++ +F EM+ R + PD T SLL AC G +G QVH+ + G
Sbjct: 180 AHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPA 239
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
SN + A+L +Y KC L A+ VF L + +++ W ++I Q Q +E LF R
Sbjct: 240 SNAILAGALLDVYVKCHRLPVAMQVFDGLERR-NAIQWTTVIVGHAQEGQVKEAMCLFRR 298
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
+S ++ D + V+ A A +E Q+HCY KT DV V N L+D+Y+KCG
Sbjct: 299 FWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGL 358
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
G A + F M +VVSW+++I G + G G EA+ LF M++ GV + V + +L+A
Sbjct: 359 TGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSA 418
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
CSH GLV+E + + + + P EH +C+VDLL RAG + EA++ I M + +
Sbjct: 419 CSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVG 478
Query: 572 VWKSLLAS 579
VW++LL++
Sbjct: 479 VWQTLLSA 486
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 217/488 (44%), Gaps = 53/488 (10%)
Query: 34 RPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
R A L+ A + SL+ G ++H ++ D +L N++++MY KCG L A F
Sbjct: 3 RRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVF 62
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
D MP+RNVVSWTA++ G + + + ++L+ +M SG P +FT + +KAC G
Sbjct: 63 DGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTR 120
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
G Q+H +++ H + N+L+ MY+K DAR VF I +++ +W SMI+ ++
Sbjct: 121 AGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYA 180
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------- 251
G ++L F EM QP+EF F S+ ACS
Sbjct: 181 HAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPAS 240
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
A +F+ ++ + W +I G A EAM LF
Sbjct: 241 NAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFW 300
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ DG + S++ + QG QVH Y K +V V N+++ MY KC +
Sbjct: 301 SSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTG 360
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A F+E+ + VSW ++I +H E LF M A ++ D + + ++ AC
Sbjct: 361 EAGRRFREMPAR-NVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSAC 419
Query: 412 AKMASLEMVTQLHCYITK----TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPD 466
+ +V + Y ++ + ++D+ + G L A++L M P
Sbjct: 420 SHSG---LVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPT 476
Query: 467 VVSWSSLI 474
V W +L+
Sbjct: 477 VGVWQTLL 484
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 155/352 (44%), Gaps = 18/352 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S ++L+ + Q + + T+A L+ ACS L + + G +VH +
Sbjct: 173 NSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMA 232
Query: 63 LSKCQP--DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ P + +L +L++Y KC L A FD + +RN + WT +I G +Q Q +A
Sbjct: 233 VRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEA 292
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ L+ + SGV S++ + V G+Q+H + K+ G + N+L+ M
Sbjct: 293 MCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDM 352
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K +A F + ++V SW +MI K G+ EA+ F EM G + +E
Sbjct: 353 YLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGV-EADEVA 411
Query: 241 FGSVFSACSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ ++ SACS+ F+RI + P + ++ + EA L M
Sbjct: 412 YLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSM 471
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
+ P +LL AC + G +V ++ + D + PV +L+
Sbjct: 472 ---PMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAV--DGDNPVNYVMLS 518
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 160/558 (28%), Positives = 262/558 (46%), Gaps = 64/558 (11%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
NT R +Y +IS L R + D + + D+ N +L Y + L
Sbjct: 73 NTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM----PERDLFSWNVMLTGYVRNCRLG 128
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ------SGVMPGQFTFGS 141
DAR FD MP+++VVSW ++++G +QN ++A +++ M + +G++ G
Sbjct: 129 DARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGR 188
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
I +AC + +S+ LI+ N L+ + + ++ DAR +F + +D
Sbjct: 189 IEEACL--------------LFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRD 234
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDS 261
SW +MI+ +++ G +A F+E + + G V + + A+ F+E+
Sbjct: 235 AISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE 294
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
+ S+NA+IAG + A LF M R
Sbjct: 295 KNEVSYNAMIAGYVQTKKMDIARELFESMPCR---------------------------- 326
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
N+ N ++T Y + + A F ++ D VSW +IIA Q
Sbjct: 327 -----------NISSWNTMITGYGQIGDIAQARKFF-DMMPQRDCVSWAAIIAGYAQSGH 374
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
EE +F + + TF + CA +A+LE+ Q+H K G FV N
Sbjct: 375 YEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNA 434
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+ +Y KCGS+ A F +E DVVSW++++ GYA+ G G +AL +F M++ GV P+
Sbjct: 435 LLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPD 494
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
+T+VGVL+ACSH GL++ G + M +YG+IPT +H +C++DLL RAG + EA+D I
Sbjct: 495 EITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLI 554
Query: 562 NQMACDADIVVWKSLLAS 579
M W +LL +
Sbjct: 555 RNMPFQPGAASWGALLGA 572
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 132/582 (22%), Positives = 244/582 (41%), Gaps = 65/582 (11%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VS + + +EA +D + +Y +I+ + + + R++ + +
Sbjct: 273 VSGYVQNGMLDEAKTFFDEMPEKNEV-----SYNAMIAGYVQTKKMDIARELFESM---P 324
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
C+ ++ N ++ YG+ G + AR FD MPQR+ VSW A+IAG +Q+ +A+ +++
Sbjct: 325 CR-NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFV 383
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
++ Q G + TFG + C+ + ++ LG+Q+H +K +G+ NAL+AMY K
Sbjct: 384 EIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCG 443
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I +A + F GI KDV SW +M+A +++ G+ +AL F M G +P+E V
Sbjct: 444 SIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGV-KPDEITMVGVL 502
Query: 246 SACSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
SACS+ F + + P + +I + EA L +R+
Sbjct: 503 SACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDL---IRNMPF 559
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P + +LL A G + + KM N + + +YA +A
Sbjct: 560 QPGAASWGALLGASRIHGNTELGEKAAEMVFKME-PQNSGMYVLLSNLYAASGRWVDADK 618
Query: 356 V---FKELG-KNADSVSWNSI--------IAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
+ +++G + SW + + C H + E ++ + + +++
Sbjct: 619 MRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDC-SHPEKERIYAYLEELDLKMREEGYVS 677
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK-----CGSLGSARKL 458
++ + E + + H K +AF + + G I + C SA K
Sbjct: 678 LTKLVLHDVEEEEKEHMLKYHS--EKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKH 735
Query: 459 FNFMENPDVVSWSSLILGYAQFG---CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
+ + ++ S + G CGD L+ F L +
Sbjct: 736 ISKIVGRLIILRDSHRFHHFNEGFCSCGDYWLQFF------------------LLVVIYT 777
Query: 516 GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
GL++ G + M EY + PT +H +C++DLL R + E
Sbjct: 778 GLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG 819
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 190/443 (42%), Gaps = 79/443 (17%)
Query: 197 IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILF 256
+ D+ W I+ + G+ AL FN M + N I G + ++ N AR LF
Sbjct: 44 VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF 103
Query: 257 NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL-------------------- 296
+++ DL SWN ++ G + +A LF M +++++
Sbjct: 104 DQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEARE 163
Query: 297 -------PDGLTVHSLLCACI--GRLT----LYQGMQVHSYI------------IKMG-- 329
+ ++ + LL A + GR+ L++ I K+G
Sbjct: 164 VFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDA 223
Query: 330 ---FDSNVPVCNAI-----LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
FD +PV +AI ++ YA+ L A +F E D +W ++++ +Q+
Sbjct: 224 RWLFDK-MPVRDAISWNTMISGYAQGGGLSQARRLFDE-SPTRDVFTWTAMVSGYVQNGM 281
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+E F M + + +++N ++ + +++ +L ++ ++ N
Sbjct: 282 LDEAKTFFDEM----PEKNEVSYNAMIAGYVQTKKMDIARELF----ESMPCRNISSWNT 333
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
++ Y + G + ARK F+ M D VSW+++I GYAQ G +EAL +F ++ G S N
Sbjct: 334 MITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLN 393
Query: 502 LVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVD--LLA---RAGCVH 555
T L+ C+ + +E G ++ + ++ YG C V LLA + G +
Sbjct: 394 RATFGCALSTCADIAALELGKQIHGQAVKMGYG-------TGCFVGNALLAMYFKCGSID 446
Query: 556 EAEDFINQMACDADIVVWKSLLA 578
EA D + + D+V W ++LA
Sbjct: 447 EANDTFEGIE-EKDVVSWNTMLA 468
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 124/325 (38%), Positives = 194/325 (59%), Gaps = 1/325 (0%)
Query: 253 RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
R +F+E+ D+ SWN L+ G A EA+ L EM PD T+ S+L
Sbjct: 127 RKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEG 186
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
+ +GM++H + + GF +V V ++++ MYA C+ ++ VF L D++ WNS+
Sbjct: 187 ADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR-DAILWNSM 245
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
+A C Q+ +E LF RML S IKP +TF+ ++ AC +ASL + QLH Y+ + G
Sbjct: 246 LAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGF 305
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
+VF+ + L+D+Y KCG++ AR++F+ +++PD+VSW+++I+G+A G EAL LF R
Sbjct: 306 DGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDR 365
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAG 552
M + PN +T + VLTACSH GLV++G + M + YGI+P+ EH + + D L R G
Sbjct: 366 MELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPG 425
Query: 553 CVHEAEDFINQMACDADIVVWKSLL 577
+ EA +FI+ M VW +LL
Sbjct: 426 KLEEAYNFISGMKIKPTASVWSTLL 450
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 175/424 (41%), Gaps = 63/424 (14%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMY--------------G 81
++ G + +C++L LG +H L S D N +LN+Y G
Sbjct: 59 TSLPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDG 118
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
LE R FD+MP+++VVSW ++ GC+++ + +A+ L +M + G P FT S
Sbjct: 119 SAVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSS 178
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
++ + V G +LH ++ + ++LI MY R + VF + +D
Sbjct: 179 VLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRD 238
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------- 251
W SM+A ++ G EAL F MLH G +P F S+ AC N
Sbjct: 239 AILWNSMLAGCAQNGSVDEALGLFRRMLHSG-IKPMPVTFSSLIPACGNLASLLLGKQLH 297
Query: 252 ------------------------------ARILFNEIDSPDLASWNALIAGVASHSNAN 281
AR +F+ I SPD+ SW A+I G A H A
Sbjct: 298 AYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAR 357
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAI 340
EA+ LF M L P+ +T ++L AC + +G + +S G ++ A+
Sbjct: 358 EALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAAL 417
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRLFSRML 393
+ L A + + W++++ AC H A+++F L R +
Sbjct: 418 ADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSM 477
Query: 394 ASQI 397
S I
Sbjct: 478 GSHI 481
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 154/338 (45%), Gaps = 37/338 (10%)
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDREL----------LPDGLTVHSLLCACIGRLTL 315
SW I AS + + A++LF MR + LP L CA +G L
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKS----CAALGLRAL 76
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS--------------VLCNALLVFKELG 361
G +H+ ++ G ++ NA+L +Y K VL + VF E+
Sbjct: 77 --GASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMP 134
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
+ D VSWN+++ C + + E L M KPD T + V+ A+ A +
Sbjct: 135 EK-DVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGM 193
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
+LH + T+ G DVFV + L+D+Y C + K+F+ + D + W+S++ G AQ G
Sbjct: 194 ELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNG 253
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG--LVEEGLHLYRIMENEYGIIPTRE 539
DEAL LF RM G+ P VT ++ AC ++ L+ + LH Y I G +
Sbjct: 254 SVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFI-- 311
Query: 540 HCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
S ++D+ + G V A +++ DIV W +++
Sbjct: 312 -SSSLIDMYCKCGNVSIARRIFDRIQ-SPDIVSWTAMI 347
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 102/192 (53%), Gaps = 14/192 (7%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
++ I+ P T++ LI AC +L SL LG+++H +++ +V + + +++MY KCG++
Sbjct: 267 HSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVS 326
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
AR FD++ ++VSWTAMI G + + +A+ L+ +M + P TF +++ ACS
Sbjct: 327 IARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACS 386
Query: 148 GLGSVCLGRQL------HAHVIKS-EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
G V G + H ++ S EH AL + ++ +A N SG+ K
Sbjct: 387 HAGLVDKGWKYFNSMSDHYGIVPSLEH------HAALADTLGRPGKLEEAYNFISGMKIK 440
Query: 201 DVTS-WGSMIAA 211
S W +++ A
Sbjct: 441 PTASVWSTLLRA 452
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 161/590 (27%), Positives = 281/590 (47%), Gaps = 52/590 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
Y+ + C+ + + LG ++H ++ DV L+ ++N YG+C LE A F +M
Sbjct: 135 VYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEM 194
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P + W I Q+ + ++L+ +M S + T +++AC +G++ +
Sbjct: 195 PNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAK 254
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H +V + S + N LI+MY+K ++ AR VF + ++ +SW SMI++++ LG
Sbjct: 255 QIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALG 314
Query: 217 ---------YELEAL----------CHFNEMLHHG---------------AYQPNEFIFG 242
YELE+ C + HG ++PN
Sbjct: 315 FLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMT 374
Query: 243 SVFSACSNFA----------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
SV A S +L N D D+ +LI + + A ++F M++
Sbjct: 375 SVLQAISELGFLNMGKETHGYVLRNGFDC-DVYVGTSLIDMYVKNHSLTSAQAVFDNMKN 433
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
R + +SL+ + +++ + + K G ++ N +++ YA
Sbjct: 434 RNIF----AWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKE 489
Query: 353 ALLVF---KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
AL V K LG + VSW ++I+ Q + + F++M + P+ + ++
Sbjct: 490 ALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLR 549
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
ACA ++ L+ ++HC + G DVFV L+D+Y K SL +A K+F ++N + S
Sbjct: 550 ACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLAS 609
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+ +I+G+A FG G EA+ +F M+ +GV P+ +T +L+AC + GL+ EG + M
Sbjct: 610 WNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMI 669
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+Y I+P EH C+VDLL RAG + EA D I+ M D +W +LL S
Sbjct: 670 TDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGS 719
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 223/490 (45%), Gaps = 48/490 (9%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++ +T ++ AC + +L +++H ++ DV L N +++MY K G LE AR
Sbjct: 230 LKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELAR 289
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP----------GQFTFG 140
FD M RN SW +MI+ + NDA L+ ++ S + P G F G
Sbjct: 290 RVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHG 349
Query: 141 -------------------------SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
S+++A S LG + +G++ H +V+++ +
Sbjct: 350 YKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGT 409
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
+LI MY K + A+ VF + +++ +W S+++ +S G +AL N+M G +
Sbjct: 410 SLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGI-K 468
Query: 236 P-----NEFIFGSVFSACSNFARILFNEIDS----PDLASWNALIAGVASHSNANEAMSL 286
P N I G C A + ++ S P++ SW ALI+G + N +++
Sbjct: 469 PDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKF 528
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
F++M+ ++P+ ++ LL AC L +G ++H I+ GF +V V A++ MY+K
Sbjct: 529 FAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSK 588
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
S L NA VF+ + +N SWN +I +E +F+ M + PD ITF
Sbjct: 589 SSSLKNAHKVFRRI-QNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTA 647
Query: 407 VMGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-N 464
++ AC + E IT + + ++D+ + G L A L + M
Sbjct: 648 LLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLK 707
Query: 465 PDVVSWSSLI 474
PD W +L+
Sbjct: 708 PDATIWGALL 717
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 162/316 (51%), Gaps = 6/316 (1%)
Query: 266 SWNALIAGVASHSNA-NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
WN+ + S + + + + +F E+ + ++ D L C + ++ GM++H
Sbjct: 99 KWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGC 158
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
+IK GFD +V + A++ Y +C L A VF E+ N +++ WN I LQ + ++
Sbjct: 159 LIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEM-PNPEALLWNEAIILNLQSEKLQK 217
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
LF +M S +K + T V+ AC KM +L Q+H Y+ + GL DV + N L+
Sbjct: 218 GVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLIS 277
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y K G L AR++F+ MEN + SW+S+I YA G ++A LF + S + P++VT
Sbjct: 278 MYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVT 337
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH---EAEDFI 561
+L+ G EE L++ + M+ E G P + V+ ++ G ++ E ++
Sbjct: 338 WNCLLSGHFLHGYKEEVLNILQRMQGE-GFKPNSSSMTSVLQAISELGFLNMGKETHGYV 396
Query: 562 NQMACDADIVVWKSLL 577
+ D D+ V SL+
Sbjct: 397 LRNGFDCDVYVGTSLI 412
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 168/377 (44%), Gaps = 32/377 (8%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S+ ++ A S L L +G++ H ++L + DV + +++MY K SL A+ FD
Sbjct: 371 SSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDN 430
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M RN+ +W ++++G S DA++L QM + G+ P T+ +I SG G
Sbjct: 431 MKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMI---SGYAMWGCG 487
Query: 156 RQLHA--HVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
++ A H KS ++++ ALI+ ++ D+ F+ + ++ V + I
Sbjct: 488 KEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCL 547
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFI--------FGSVFSACSNF--ARILFNEIDSP 262
+ L L E+ H N FI ++S S+ A +F I +
Sbjct: 548 LRACASLSLLQKGKEI--HCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNK 605
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
LASWN +I G A EA+S+F+EM+ + PD +T +LL AC + +G +
Sbjct: 606 TLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWK-- 663
Query: 323 SYIIKMGFDSN-VPVCN---AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
Y M D VP ++ + + L A + + D+ W +++ +C
Sbjct: 664 -YFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRI 722
Query: 379 HNQ-------AEELFRL 388
H A+ LF+L
Sbjct: 723 HKNLKFAETAAKNLFKL 739
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 118/263 (44%), Gaps = 9/263 (3%)
Query: 321 VHSYIIKMGFDSNV-PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+H+ +IK+ N +++ Y +A +VF +G + + WNS +
Sbjct: 52 MHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFY-VGLPRNYLKWNSFVEEFKSS 110
Query: 380 NQAEEL-FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+ + +F + + D ++ + C ++ + + ++H + K G DV++
Sbjct: 111 AGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYL 170
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
LM+ Y +C L A ++F+ M NP+ + W+ I+ Q + ++LF +M+ +
Sbjct: 171 RCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFL 230
Query: 499 SPNLVTLVGVLTACSHVGLVE--EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
T+V VL AC +G + + +H Y +G+ C+ ++ + ++ G +
Sbjct: 231 KAETATIVRVLQACGKMGALNAAKQIHGYVF---RFGLDSDVSLCNPLISMYSKNGKLEL 287
Query: 557 AEDFINQMACDADIVVWKSLLAS 579
A + M + + W S+++S
Sbjct: 288 ARRVFDSME-NRNTSSWNSMISS 309
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 136/358 (37%), Positives = 206/358 (57%), Gaps = 8/358 (2%)
Query: 229 LHHGAYQPN-----EFIFGSV-FSACSNFARILFNEIDSPDLASWNALIAGVASHSNANE 282
+ HG N IF V SA +FA +FN+I +P++ +WN +I G A N +
Sbjct: 59 IRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSP 118
Query: 283 AMSLFSEMRD-RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
A+ LFS+M +LPD T L A + + G +HS +++ GFDS V N+++
Sbjct: 119 AVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLV 178
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
MY+ L +A VF E+ D V+WNS+I + E L+ M + ++PD
Sbjct: 179 HMYSVLGSLXSAYQVF-EIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDG 237
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
T ++ AC ++ +L + ++H Y+ K GL + N L+D+Y KCG+ A+K+F+
Sbjct: 238 FTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDE 297
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
ME VVSW+SLI+G A G G+EALKLF + G+ P+ +T VGVL ACSH G+++EG
Sbjct: 298 MEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEG 357
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ +R M+ EYGI+P EH C+VDLL RAG V +A D+I M + V+W++LL +
Sbjct: 358 FNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGA 415
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 119/229 (51%), Gaps = 3/229 (1%)
Query: 24 FSQNNTNIRIRPST--YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYG 81
FSQ + I P T + L A + L + LG +H ++ + +QN +++MY
Sbjct: 123 FSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYS 182
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
GSL A F+ M R+ V+W ++I G + N N+A+ LY +M GV P FT S
Sbjct: 183 VLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVS 242
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
++ AC LG++ LG ++H +++K + A NAL+ +Y+K DA+ VF + +
Sbjct: 243 LLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERS 302
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
V SW S+I + G EAL F E+ G +P+E F V ACS+
Sbjct: 303 VVSWTSLIVGLAVNGLGNEALKLFGELERQG-LKPSEITFVGVLYACSH 350
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 150/336 (44%), Gaps = 49/336 (14%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGLGS 151
F+++ N+ +W MI G +++ + A++L+ QM S ++P TF + KA + L
Sbjct: 92 FNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMD 151
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
V LG +H+ V+++ S QN+L+ MY+ + A VF ++ +D +W S+I
Sbjct: 152 VSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVING 211
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC----------------------- 248
F+ G EAL + EM G +P+ F S+ SAC
Sbjct: 212 FALNGMPNEALTLYREMGSEGV-EPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQ 270
Query: 249 ---------------SNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
NF A+ +F+E++ + SW +LI G+A + NEA+ LF E+
Sbjct: 271 NQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELE 330
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM----GFDSNVPVCNAILTMYAKC 347
+ L P +T +L AC L +G +Y +M G + ++ + +
Sbjct: 331 RQGLKPSEITFVGVLYACSHCGMLDEGF---NYFRRMKEEYGILPRIEHHGCMVDLLCRA 387
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ +A + + ++V W +++ AC H E
Sbjct: 388 GKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLE 423
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + NEAL Y + + T L+SAC L +L LG +VH +++
Sbjct: 206 NSVINGFALNGMPNEALTLYR-EMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMV 264
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ N +L++Y KCG+ DA+ FD+M +R+VVSWT++I G + N N+A+K
Sbjct: 265 KVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALK 324
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLG 150
L+ ++ + G+ P + TF ++ ACS G
Sbjct: 325 LFGELERQGLKPSEITFVGVLYACSHCG 352
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 160/558 (28%), Positives = 262/558 (46%), Gaps = 64/558 (11%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
NT R +Y +IS L R + D + + D+ N +L Y + L
Sbjct: 73 NTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM----PERDLFSWNVMLTGYVRNCRLG 128
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ------SGVMPGQFTFGS 141
DAR FD MP+++VVSW ++++G +QN ++A +++ M + +G++ G
Sbjct: 129 DARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGR 188
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
I +AC + +S+ LI+ N L+ + + ++ DAR +F + +D
Sbjct: 189 IEEACL--------------LFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRD 234
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDS 261
SW +MI+ +++ G +A F+E + + G V + + A+ F+E+
Sbjct: 235 AISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE 294
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
+ S+NA+IAG + A LF M R
Sbjct: 295 KNEVSYNAMIAGYVQTKKMDIARELFESMPCR---------------------------- 326
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
N+ N ++T Y + + A F ++ D VSW +IIA Q
Sbjct: 327 -----------NISSWNTMITGYGQIGDIAQARKFF-DMMPQRDCVSWAAIIAGYAQSGH 374
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
EE +F + + TF + CA +A+LE+ Q+H K G FV N
Sbjct: 375 YEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNA 434
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+ +Y KCGS+ A F +E DVVSW++++ GYA+ G G +AL +F M++ GV P+
Sbjct: 435 LLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPD 494
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
+T+VGVL+ACSH GL++ G + M +YG+IPT +H +C++DLL RAG + EA+D I
Sbjct: 495 EITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLI 554
Query: 562 NQMACDADIVVWKSLLAS 579
M W +LL +
Sbjct: 555 RNMPFQPGAASWGALLGA 572
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 189/441 (42%), Gaps = 75/441 (17%)
Query: 197 IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILF 256
+ D+ W I+ + G+ AL FN M + N I G + ++ N AR LF
Sbjct: 44 VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF 103
Query: 257 NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL-------------------- 296
+++ DL SWN ++ G + +A LF M +++++
Sbjct: 104 DQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEARE 163
Query: 297 -------PDGLTVHSLLCACI--GRLT----LYQGMQVHSYI------------IKMG-- 329
+ ++ + LL A + GR+ L++ I K+G
Sbjct: 164 VFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDA 223
Query: 330 ---FDSNVPVCNAI-----LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
FD +PV +AI ++ YA+ L A +F E D +W ++++ +Q+
Sbjct: 224 RWLFDK-MPVRDAISWNTMISGYAQGGGLSQARRLFDE-SPTRDVFTWTAMVSGYVQNGM 281
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
+E F M + + +++N ++ + +++ +L ++ ++ N
Sbjct: 282 LDEAKTFFDEM----PEKNEVSYNAMIAGYVQTKKMDIARELF----ESMPCRNISSWNT 333
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
++ Y + G + ARK F+ M D VSW+++I GYAQ G +EAL +F ++ G S N
Sbjct: 334 MITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLN 393
Query: 502 LVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLA---RAGCVHEA 557
T L+ C+ + +E G ++ + ++ YG C LLA + G + EA
Sbjct: 394 RATFGCALSTCADIAALELGKQIHGQAVKMGYGT-----GCFVGNALLAMYFKCGSIDEA 448
Query: 558 EDFINQMACDADIVVWKSLLA 578
D + + D+V W ++LA
Sbjct: 449 NDTFEGIE-EKDVVSWNTMLA 468
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 110/210 (52%), Gaps = 7/210 (3%)
Query: 6 VSSLCKQNLYNEALVAY-DFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLS 64
++ + Y EAL + + Q+ ++ +T+ +S C+ + +L+LG+++H +
Sbjct: 366 IAGYAQSGHYEEALNMFVEIKQDGESLN--RATFGCALSTCADIAALELGKQIHGQAVKM 423
Query: 65 KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
+ N +L MY KCGS+++A F+ + +++VVSW M+AG +++ A+ ++
Sbjct: 424 GYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVF 483
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYT 182
M +GV P + T ++ ACS G + G + + K ++G +++ +I +
Sbjct: 484 ESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTK-DYGVIPTSKHYTCMIDLLG 542
Query: 183 KFDRILDARNVFSGIA-RKDVTSWGSMIAA 211
+ R+ +A+++ + + SWG+++ A
Sbjct: 543 RAGRLEEAQDLIRNMPFQPGAASWGALLGA 572
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 163/569 (28%), Positives = 272/569 (47%), Gaps = 53/569 (9%)
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
+ H I+L + D+ L + G++ AR F + + +V + ++ G S N
Sbjct: 38 QTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 116 QENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
+ ++ ++ + +S + P T+ I A SG G +H I S L+
Sbjct: 98 SPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLG 157
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH--- 231
+ ++ MY KF R+ DAR VF + KD W +MI+ + K +E++ F ++++
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 232 ---------------------------------GAYQPNEFIFG--SVFSACSNF--ARI 254
G Y + + G S++S C A
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMAST 277
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL----LCACI 310
LF E PD+ ++NA+I G S+ ++SLF +EL+ G + S L
Sbjct: 278 LFREFRRPDIVAYNAMIHGYTSNGETELSLSLF-----KELMLSGAKLKSSTLVSLVPVS 332
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
G L L +H Y +K F S+ V A+ T+Y+K + + +A +F E SWN
Sbjct: 333 GHLMLIYA--IHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDE-SPEKSLPSWN 389
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
++I+ Q+ E+ LF M S+ P+ +T ++ ACA++ +L + +H + T
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST 449
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
++V L+ +Y KCGS+ AR+LF+FM + V+W+++I GY G G EAL +F
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIF 509
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
+ M + G++P VT + VL ACSH GLV+EG ++ M + YG P+ +H +CVVD+L R
Sbjct: 510 SEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGR 569
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
AG + A FI M VW++LL +
Sbjct: 570 AGHLQRALQFIEAMPIQPGPSVWETLLGA 598
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/498 (27%), Positives = 236/498 (47%), Gaps = 40/498 (8%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
+ +L + + +T+++ STYA ISA S R + G +H ++ C +++L ++
Sbjct: 100 HSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSN 159
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSGVMP 134
I+ MY K +EDAR FD+MP+++ + W MI+G +N ++I+++ ++ +S
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
T I+ A + L + LG Q+H+ K+ SH I++Y+K +I A +F
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLF 279
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV---------- 244
R D+ ++ +MI ++ G +L F E++ GA + + V
Sbjct: 280 REFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIY 339
Query: 245 ----FSACSNF----------------------ARILFNEIDSPDLASWNALIAGVASHS 278
+S SNF AR LF+E L SWNA+I+G +
Sbjct: 340 AIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
+A+SLF EM++ E P+ +T+ +L AC L G VH + F+S++ V
Sbjct: 400 LTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVST 459
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
A++ MYAKC + A +F + K + V+WN++I+ H +E +FS ML S I
Sbjct: 460 ALIGMYAKCGSIAEARRLFDFMPKK-NEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIA 518
Query: 399 PDHITFNDVMGACAKMASLEMVTQL-HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
P +TF V+ AC+ ++ ++ + I + G V ++DI + G L A +
Sbjct: 519 PTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQ 578
Query: 458 LFNFME-NPDVVSWSSLI 474
M P W +L+
Sbjct: 579 FIEAMPIQPGPSVWETLL 596
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 196/444 (44%), Gaps = 47/444 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S K +Y E++ + N + R+ +T ++ A + L+ L+LG ++H
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLAT 248
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ C + +++Y KCG ++ A F + + ++V++ AMI G + N + ++
Sbjct: 249 KTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLS 308
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ +++ SG T S++ G + L +H + +KS SH AL +Y+
Sbjct: 309 LFKELMLSGAKLKSSTLVSLVPVS---GHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYS 365
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + I AR +F K + SW +MI+ +++ G +A+ F EM + + PN
Sbjct: 366 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM-QNSEFSPNPVTIT 424
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
+ SAC+ AR LF+ +
Sbjct: 425 CILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKK 484
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV- 321
+ +WN +I+G H + EA+++FSEM + + P +T +L AC + +G ++
Sbjct: 485 NEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIF 544
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
+S I + GF+ +V ++ + + L AL + + W +++ AC H
Sbjct: 545 NSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKD 604
Query: 382 AEELFRLFSRMLASQIKPDHITFN 405
L R S L ++ PD++ ++
Sbjct: 605 T-NLARTVSEKLF-ELDPDNVGYH 626
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 175/586 (29%), Positives = 293/586 (50%), Gaps = 61/586 (10%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
LI+ S+L L + H I+L+ D+V + + +++ A + F +P +
Sbjct: 16 LINRVSTLHQLN---QTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPD 72
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGRQLH 159
+ + +I S N + A+ LY + +S + P FT+ +I S S+ LG LH
Sbjct: 73 LFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGAS---SLGLGLLLH 129
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
AH I + GS L +A++A Y KF R+ AR VF G+ +D W +M++ K
Sbjct: 130 AHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFD 189
Query: 220 EALCHFNEMLHHG----------------------------------AYQPNEFI---FG 242
EA+ F +M+ G + + ++
Sbjct: 190 EAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLA 249
Query: 243 SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
++S C AR+LF +I PDL S+NA+I+G ++ ++ LF +ELL G
Sbjct: 250 CLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLF-----KELLVSGE 304
Query: 301 TVHSLLCACIGRLTLYQGMQ-------VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
V+S + +G + ++ +H + K G SN V A+ T+Y++ + + +A
Sbjct: 305 KVNS--SSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESA 362
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
L+F E + + + SWN++I+ Q+ E+ LF M +++P+ +T ++ ACA+
Sbjct: 363 RLLFDESSEKSLA-SWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQ 421
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+ +L + +H I + ++FV L+D+Y KCGS+ A++LF+ M + V+W+++
Sbjct: 422 LGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAM 481
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I GY G G EAL LF M VSP VT + VL ACSH GLV EG ++R M +++G
Sbjct: 482 ISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHG 541
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P EH +C+VDLL RAG + +A DFI +M + VW +LL +
Sbjct: 542 FEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGA 587
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/489 (24%), Positives = 220/489 (44%), Gaps = 43/489 (8%)
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
ML G+ + F ++I S L + Q HA +I + + L+ L +
Sbjct: 1 MLYRGIASTRNLFLTLINRVSTLHQL---NQTHAQIILNGLHNDLVTVTKLTHKLSHLKA 57
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF----- 241
I A +FS I D+ + +I AFS A+ + + +P+ F +
Sbjct: 58 IDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVIS 117
Query: 242 --------------------------GSVFSACS-NFARI-----LFNEIDSPDLASWNA 269
GS AC F+R+ +F+ + D WN
Sbjct: 118 GASSLGLGLLLHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNT 177
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
+++G+ +S +EA+ +F +M + D TV ++L L GM + +K+G
Sbjct: 178 MVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVG 237
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
F S+ V + +Y+KC + A L+F ++G+ D VS+N++I+ +N+ E RLF
Sbjct: 238 FHSHAYVITGLACLYSKCGEIETARLLFGQIGQ-PDLVSYNAMISGYTCNNETESSVRLF 296
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
+L S K + + ++ L + +H + TK+G+ + V L +Y +
Sbjct: 297 KELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRL 356
Query: 450 GSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVL 509
+ SAR LF+ + SW+++I GYAQ G ++A+ LF M+ V PN VT+ +L
Sbjct: 357 NEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSIL 416
Query: 510 TACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
+AC+ +G + G ++ ++ E + ++D+ A+ G + EA+ + M + +
Sbjct: 417 SACAQLGALSLGKWVHDLINRE-SFESNIFVSTALIDMYAKCGSITEAQRLFSMMP-EKN 474
Query: 570 IVVWKSLLA 578
V W ++++
Sbjct: 475 AVTWNAMIS 483
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 195/443 (44%), Gaps = 45/443 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N VS L K + ++EA++ + I +T A ++ + L+ L LG + +
Sbjct: 176 NTMVSGLVKNSCFDEAILIFG-DMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAM 234
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + +Y KCG +E AR+ F ++ Q ++VS+ AMI+G + N + +++
Sbjct: 235 KVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVR 294
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ ++L SG + +I G + L R +H KS S+ AL +Y+
Sbjct: 295 LFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYS 354
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
+ + I AR +F + K + SW +MI+ +++ G +A+ F EM +PN
Sbjct: 355 RLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEM-QKCEVRPNPVTVT 413
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
S+ SAC+ A+ LF+ +
Sbjct: 414 SILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEK 473
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV- 321
+ +WNA+I+G H +EA++LF+EM + P G+T S+L AC + +G ++
Sbjct: 474 NAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIF 533
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
S + GF+ ++ + + L AL +++ W +++ AC+ H
Sbjct: 534 RSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKD 593
Query: 382 AEELFRLFSRMLASQIKPDHITF 404
A L RL S L ++ P ++ +
Sbjct: 594 A-NLARLASDKLF-ELDPQNVGY 614
>gi|297819724|ref|XP_002877745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323583|gb|EFH54004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 764
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 167/592 (28%), Positives = 286/592 (48%), Gaps = 51/592 (8%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLS---KCQPDVVLQNHILNMYGKCGSLEDARMG 92
S+ L C S+ +L+ ++H IL + N++++MY +CGSLE AR
Sbjct: 8 SSVVELTRKCVSITALKRACQLHAIILTAGAGSASESPYKNNNLISMYVRCGSLEQARKL 67
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQ-ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
FDKMP+RNVVS+ A+ + S+N + A L QM + P TF S+++ C+ L
Sbjct: 68 FDKMPERNVVSYNALYSAYSRNLDYASYAFSLINQMASESLKPNSSTFTSLVQVCTVLED 127
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
V +G LH+ +IK + +++ Q +++ MY+ + AR +F + D +W +MI
Sbjct: 128 VLMGSLLHSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFECVNGGDAVAWNTMIVG 187
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------ARIL---- 255
+ + L F ML G P +F + V +ACS AR++
Sbjct: 188 IFRNDKIEDGLMLFRSMLMSGV-DPTQFTYSMVLNACSKLGSYRYSVGKLIHARMIVSDI 246
Query: 256 --------------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
F +I +P+L SWN++I+G + + +A+ ++
Sbjct: 247 LADLPVENALLDMYCSCGDMKEAFYVFGKIHNPNLVSWNSIISGCSENGFGEQAILMYRR 306
Query: 290 M-RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
+ R PD T + + A G +H + K+G++ +V V +L+MY K
Sbjct: 307 LLRISTPRPDEYTFSAAIPATAEPEKFIHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNG 366
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+A VF + + D V W +I + +E +LF M + + D + + V+
Sbjct: 367 EAESAQKVFGVITER-DVVLWTEMIVGESRVGNSECAVQLFIEMYREKNRTDGFSLSSVL 425
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
GAC+ MA L H KTG + V L+D+Y K G +A +F+ + NPD+
Sbjct: 426 GACSDMAMLRQGQVFHSLAIKTGFDNVMSVSGALVDMYGKNGKYETAESIFSLVSNPDLK 485
Query: 469 SWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
W+S++ Y+Q G ++A F ++ G +P+ VT + +L ACSH G +EG L+ M
Sbjct: 486 CWNSMLGAYSQHGMVEKAQSFFEQILENGFTPDAVTYLSLLAACSHKGSTQEGKFLWNQM 545
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV-VWKSLLAS 579
+ E GI +H SC+V L+++AG + EA + I Q + + +W++LL++
Sbjct: 546 K-EQGITAGFKHYSCMVSLVSKAGLLGEALELIKQSPPENNQAELWRTLLSA 596
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 141/502 (28%), Positives = 230/502 (45%), Gaps = 49/502 (9%)
Query: 21 AYDFSQNNT----NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
+Y FS N +++ ST+ L+ C+ L + +G +H I+ +VV+Q +
Sbjct: 94 SYAFSLINQMASESLKPNSSTFTSLVQVCTVLEDVLMGSLLHSQIIKLGYSDNVVVQTSV 153
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
L MY CG LE AR F+ + + V+W MI G +N + D + L+ ML SGV P Q
Sbjct: 154 LGMYSSCGDLESARRIFECVNGGDAVAWNTMIVGIFRNDKIEDGLMLFRSMLMSGVDPTQ 213
Query: 137 FTFGSIIKACSGLGS--VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
FT+ ++ ACS LGS +G+ +HA +I S+ + L +NAL+ MY + +A VF
Sbjct: 214 FTYSMVLNACSKLGSYRYSVGKLIHARMIVSDILADLPVENALLDMYCSCGDMKEAFYVF 273
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC------ 248
I ++ SW S+I+ S+ G+ +A+ + +L +P+E+ F + A
Sbjct: 274 GKIHNPNLVSWNSIISGCSENGFGEQAILMYRRLLRISTPRPDEYTFSAAIPATAEPEKF 333
Query: 249 ----------------------------------SNFARILFNEIDSPDLASWNALIAGV 274
+ A+ +F I D+ W +I G
Sbjct: 334 IHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNGEAESAQKVFGVITERDVVLWTEMIVGE 393
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
+ N+ A+ LF EM + DG ++ S+L AC L QG HS IK GFD+ +
Sbjct: 394 SRVGNSECAVQLFIEMYREKNRTDGFSLSSVLGACSDMAMLRQGQVFHSLAIKTGFDNVM 453
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
V A++ MY K A +F L N D WNS++ A QH E+ F ++L
Sbjct: 454 SVSGALVDMYGKNGKYETAESIFS-LVSNPDLKCWNSMLGAYSQHGMVEKAQSFFEQILE 512
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGS 454
+ PD +T+ ++ AC+ S + L + + G+ + ++ + K G LG
Sbjct: 513 NGFTPDAVTYLSLLAACSHKGSTQEGKFLWNQMKEQGITAGFKHYSCMVSLVSKAGLLGE 572
Query: 455 ARKLF--NFMENPDVVSWSSLI 474
A +L + EN W +L+
Sbjct: 573 ALELIKQSPPENNQAELWRTLL 594
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 143/455 (31%), Positives = 240/455 (52%), Gaps = 33/455 (7%)
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
+Q+L P T+ ++I+ CS ++ G+++H H+ S ++ N ++ MY K
Sbjct: 76 VQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKC 135
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
++DAR VF + +DV SW M+ ++++G EA
Sbjct: 136 GSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEA----------------------- 172
Query: 245 FSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVH 303
R LF+E+ D SW A++ G EA+ L+S M R P+ TV
Sbjct: 173 --------RNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVS 224
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
S + A + +G ++H +I++ G DS+ + ++++ MY KC + A +F ++ +
Sbjct: 225 SAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI-ID 283
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
D VSW S+I + ++ E F LFS ++ S +P+ TF+ V+ ACA + + E+ Q+
Sbjct: 284 KDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQV 343
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H Y+T+ G F + L+D+Y KCG++ SAR + + PD+VS +SLI GYAQ G
Sbjct: 344 HGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKP 403
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
DEALK F + G P+ VT V VL+AC+H GLVE+GL + + ++ + T +H +C
Sbjct: 404 DEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTC 463
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+VDLLAR+G + + +++M +W S+L
Sbjct: 464 LVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLG 498
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 195/463 (42%), Gaps = 86/463 (18%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+ LC Q L EA+ ++ + STY LI CS R+L+ G+KVH+HI S
Sbjct: 63 IDVLCGQKLLREAVQLLGRAK-----KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSG 117
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV------------------------ 101
P +V+ N IL MY KCGSL DAR FD+MP+R+V
Sbjct: 118 FVPGIVIWNRILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFD 177
Query: 102 -------VSWTAMIAGCSQNYQENDAIKLYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVC 153
SWTAM+ G + Q +A+ LY M + P FT S + A + + +
Sbjct: 178 EMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIR 237
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
G+++H H++++ S + ++L+ MY K I +ARN+F I KDV SW SMI +
Sbjct: 238 RGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYF 297
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------- 251
K E F+E++ +PNE+ F V +AC++
Sbjct: 298 KSSRWREGFSLFSELI-GSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYS 356
Query: 252 ------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
AR + + PDL S +LI G A + +EA+ F +
Sbjct: 357 FASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKS 416
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
PD +T ++L AC + +G++ +S K ++ + A+
Sbjct: 417 GTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQ 476
Query: 353 ALLVFKELGKNADSVSWNSIIAAC-------LQHNQAEELFRL 388
V E+ W S++ C L A+ELF++
Sbjct: 477 LKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKI 519
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 102/231 (44%), Gaps = 40/231 (17%)
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
++L R ++L KP T+ +++ C++ +LE ++H +I +G + + N
Sbjct: 68 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 127
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
++ +Y KCGSL ARK+F+ M DV SW+ ++ GYA+ G +EA LF M +
Sbjct: 128 ILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEM----PERD 183
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMEN------------------------------- 530
+ ++T EE L LY +M+
Sbjct: 184 SYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIH 243
Query: 531 ----EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
G+ S ++D+ + GC+ EA + +++ D D+V W S++
Sbjct: 244 GHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI-IDKDVVSWTSMI 293
>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 162/582 (27%), Positives = 282/582 (48%), Gaps = 47/582 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++ ACS+ S LG +H ++ CQ + N ++ Y K G L+ A+ FD ++
Sbjct: 54 ILKACSN-TSFNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKD 112
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
VSW M+ G N + +I+ + P + +I+A L G H
Sbjct: 113 SVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHG 172
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYEL 219
++ +S + L QN+L+++Y + A +F ++ R DV SW MI F ++G +
Sbjct: 173 YIFRSGFSAILSVQNSLLSLYAEVHMYF-AHKLFGEMSVRNDVVSWSVMIGGFVQIGEDE 231
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------------- 254
+ F M+ P+ SV AC+N I
Sbjct: 232 QGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSL 291
Query: 255 ---------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
F EI ++ SWN +++ + + EA++L M D
Sbjct: 292 IDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDE 351
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+T+ ++L L + VH II+ G++SN + N+++ YAKC+++ A +VF
Sbjct: 352 VTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDG 411
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
+ K D V+W+++IA ++ + +E +F +M ++ P++++ ++M ACA A L
Sbjct: 412 MNKK-DVVAWSTMIAGFARNGKPDEAISVFKQM-NEEVIPNNVSIMNLMEACAVSAELRQ 469
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
H + GLA +V + ++D+Y KCG + ++ + FN + +VV WS++I +
Sbjct: 470 SKWAHGIAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRI 529
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTRE 539
G EAL LF +++ G PN VT + +L+ACSH GL+EEGL + M ++GI P E
Sbjct: 530 NGLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLE 589
Query: 540 HCSCVVDLLARAGCVHEAEDFINQMA--CDADIVVWKSLLAS 579
H SC+VD+L+RAG +EA + I ++ +A +W +LL+S
Sbjct: 590 HYSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSS 631
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 189/406 (46%), Gaps = 47/406 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T ++ AC++L+ + LG VH ++ + D+ + N +++MY KC ++ A F ++
Sbjct: 252 TVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEI 311
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P++N++SW M++ N +A+ L M++ G + T ++++ R
Sbjct: 312 PEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCR 371
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H +I+ + S+ + N++I Y K + + AR VF G+ +KDV +W +MIA F++ G
Sbjct: 372 SVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNG 431
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
EA+ F +M + PN ++ AC+ A +
Sbjct: 432 KPDEAISVFKQM--NEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVDIG 489
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
FN+I ++ W+A+I+ + A+EA+ LF +++
Sbjct: 490 TSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTK 549
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ +T SLL AC + +G+ + ++ K G + + + I+ M ++ AL
Sbjct: 550 PNAVTALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALE 609
Query: 356 VFKELGKNADSVS--WNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
+ ++L K ++ + W +++++C + SR+L Q++P
Sbjct: 610 LIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVL--QLEP 653
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 6/193 (3%)
Query: 24 FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
F Q N + + L+ AC+ L+ + H + +V + I++MY KC
Sbjct: 440 FKQMNEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVDIGTSIIDMYSKC 499
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G +E + F+++PQ+NVV W+AMI+ N ++A+ L+ ++ Q+G P T S++
Sbjct: 500 GDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLL 559
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHG-----SHLIAQNALIAMYTKFDRILDARNVFSGIA 198
ACS G + G +++ +HG H +++ KF+ L+
Sbjct: 560 SACSHGGLMEEGLSFFTSMVQ-KHGIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEM 618
Query: 199 RKDVTSWGSMIAA 211
+ WG+++++
Sbjct: 619 EAGASIWGTLLSS 631
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 142/455 (31%), Positives = 238/455 (52%), Gaps = 33/455 (7%)
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
+Q+L P T+ ++I+ CS ++ G+++H H+ S ++ N L+ MY K
Sbjct: 74 VQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKC 133
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
++DAR VF + +D+ SW M+ ++++G EA
Sbjct: 134 GSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEA----------------------- 170
Query: 245 FSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVH 303
R LF+E+ D SW A++ G EA+ L+S M R P+ TV
Sbjct: 171 --------RKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVS 222
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
+ A + +G ++H +I++ G DS+ + ++++ MY KC + A +F ++ +
Sbjct: 223 IAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK 282
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
D VSW S+I + ++ E F LFS ++ S +P+ TF V+ ACA + + E+ Q+
Sbjct: 283 -DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQV 341
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H Y+T+ G F + L+D+Y KCG++ SA+ + + PD+VSW+SLI G AQ G
Sbjct: 342 HGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQP 401
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
DEALK F + G P+ VT V VL+AC+H GLVE+GL + + ++ + T +H +C
Sbjct: 402 DEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTC 461
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+VDLLAR+G + + I++M +W S+L
Sbjct: 462 LVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLG 496
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 200/465 (43%), Gaps = 90/465 (19%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+ LC Q L EA+ ++ + STY LI CS R+L+ G+KVH+HI S
Sbjct: 61 IDVLCGQKLLREAVQLLGRAK-----KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSG 115
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV------------------------ 101
P +V+ N +L MY KCGSL DAR FD+MP R++
Sbjct: 116 FVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFD 175
Query: 102 -------VSWTAMIAGCSQNYQENDAIKLYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVC 153
SWTAM+ G + Q +A+ LY M + P FT + A + + +
Sbjct: 176 EMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIR 235
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
G+++H H++++ S + ++L+ MY K I +ARN+F I KDV SW SMI +
Sbjct: 236 RGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------ARILFNE-- 258
K E F+E++ +PNE+ F V +AC++ R+ F+
Sbjct: 296 KSSRWREGFSLFSELV-GSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYS 354
Query: 259 ---------------IDS----------PDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
I+S PDL SW +LI G A + +EA+ F +
Sbjct: 355 FASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKS 414
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII---KMGFDSNVPVCNAILTMYAKCSVL 350
PD +T ++L AC + +G++ I ++ S+ C ++ + A+
Sbjct: 415 GTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTC--LVDLLARSGRF 472
Query: 351 CNALLVFKELGKNADSVSWNSIIAAC-------LQHNQAEELFRL 388
V E+ W S++ C L A+ELF++
Sbjct: 473 EQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKI 517
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 7/199 (3%)
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG 441
++L R ++L KP T+ +++ C++ +LE ++H +I +G + + N
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 442 LMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPN 501
L+ +Y KCGSL ARK+F+ M N D+ SW+ ++ GYA+ G +EA KLF M +
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM----TEKD 181
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF- 560
+ ++T EE L LY +M+ P S V A C+ ++
Sbjct: 182 SYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIH 241
Query: 561 --INQMACDADIVVWKSLL 577
I + D+D V+W SL+
Sbjct: 242 GHIVRAGLDSDEVLWSSLM 260
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 146/448 (32%), Positives = 230/448 (51%), Gaps = 45/448 (10%)
Query: 175 NALIAMYTKFDRILDARNVFSG-IARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA 233
+LI MY++ +++ +A VF ++V ++ ++IA F G + + M G
Sbjct: 14 TSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYKRMRSVGV 73
Query: 234 YQPNEFIFGSVFSACSNFARI-------------------------------------LF 256
P++F F V AC F + +F
Sbjct: 74 -MPDKFTFPCVVRACCEFMEVRKIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVF 132
Query: 257 NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
E+ D+ WNA+I G + N+A+ +F M + + T S+L +
Sbjct: 133 EELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDIN 192
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
G +H + KMG+ S V V NA++ MY KC +AL++F E+ D SWNSII+A
Sbjct: 193 NGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIF-EMINEKDLFSWNSIISAH 251
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF-- 434
Q + + RLF +ML S++ PD IT V+ AC+ +A+L ++H Y+ GL
Sbjct: 252 EQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNE 311
Query: 435 ---DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
DV + N +MD+Y KCG + +A +F+ M N DV SW+ +I+GYA G G EAL +F
Sbjct: 312 NGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFH 371
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
RM + P++VT VGVL+ACSH G V +G ME E+G+IPT EH +C++D+L RA
Sbjct: 372 RMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPTIEHYTCIIDMLGRA 431
Query: 552 GCVHEAEDFINQMACDADIVVWKSLLAS 579
G + EA D ++ + ++++W +LL +
Sbjct: 432 GHLGEAYDLAQRIPLEDNLILWMALLGA 459
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 148/513 (28%), Positives = 236/513 (46%), Gaps = 70/513 (13%)
Query: 76 ILNMYGKCGSLEDARMGF-DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMP 134
++NMY +C +E+A + F D +RNV ++ A+IAG N D + Y +M GVMP
Sbjct: 16 LINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYKRMRSVGVMP 75
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
+FTF +++AC V R++H + K ++ +AL+ Y K D DA VF
Sbjct: 76 DKFTFPCVVRACCEFMEV---RKIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVF 132
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA-------------------YQ 235
+ +DV W +MI ++K+G+ +A+ F M G
Sbjct: 133 EELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDIN 192
Query: 236 PNEFIFGSV----FSAC----------------SNFARILFNEIDSPDLASWNALIAGVA 275
I G V +S+C + A ++F I+ DL SWN++I+
Sbjct: 193 NGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISAHE 252
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN-- 333
+ + + LF +M +LPD +T+ ++L AC L G ++H Y+I G N
Sbjct: 253 QCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNEN 312
Query: 334 ---VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
V + NAI+ MYAKC + NA ++F +L +N D SWN +I H E +F
Sbjct: 313 GDDVLLNNAIMDMYAKCGCMKNADIIF-DLMRNKDVASWNIMIMGYAMHGYGTEALDMFH 371
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM----NGLMDIY 446
RM +QIKPD +TF V+ AC+ V Q ++T+ L F V ++D+
Sbjct: 372 RMCEAQIKPDVVTFVGVLSACSHAG---FVHQGRSFLTRMELEFGVIPTIEHYTCIIDML 428
Query: 447 IKCGSLGSARKLFNFMENPD-VVSWSSL-----ILGYAQFG--CGDEALKLFTRMRSLGV 498
+ G LG A L + D ++ W +L + G A+ G G++ +L + G
Sbjct: 429 GRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGNAELGNVVGEKITQLEPKHCGSGS 488
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
+ +L GV VG EE L + R M+ +
Sbjct: 489 YILMSSLYGV------VGRYEEALEVRRTMKEQ 515
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 189/432 (43%), Gaps = 60/432 (13%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
+ F + ++ + P T+ ++ AC + RK+H + + +V + + ++N
Sbjct: 61 GFQFYKRMRSVGVMPDKFTFPCVVRACCEFMEV---RKIHGCLFKMGLELNVFVGSALVN 117
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
Y K EDA F+++P+R+VV W AMI G ++ N A+ ++ +M + G+ +FT
Sbjct: 118 TYLKVDGTEDAEKVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFT 177
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
SI+ + +G + GR +H V K + S + NALI MY K DA +F I
Sbjct: 178 TTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMIN 237
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------- 251
KD+ SW S+I+A + L F +ML P+ +V ACS+
Sbjct: 238 EKDLFSWNSIISAHEQCDDHDGTLRLFGKML-GSRVLPDVITITAVLPACSHLAALMHGR 296
Query: 252 --------------------------------------ARILFNEIDSPDLASWNALIAG 273
A I+F+ + + D+ASWN +I G
Sbjct: 297 EIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMG 356
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM----G 329
A H EA+ +F M + ++ PD +T +L AC ++QG S++ +M G
Sbjct: 357 YAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQG---RSFLTRMELEFG 413
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
+ I+ M + L A + + + + + W +++ AC H A EL +
Sbjct: 414 VIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGNA-ELGNVV 472
Query: 390 SRMLASQIKPDH 401
+ +Q++P H
Sbjct: 473 GEKI-TQLEPKH 483
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 131/253 (51%), Gaps = 7/253 (2%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ K N+A+V + I + T ++S +S+ + GR +H +
Sbjct: 144 NAMINGYTKIGHLNKAVVVFK-RMGEEGISLSRFTTTSILSILTSMGDINNGRAIHGIVT 202
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
V + N +++MYGKC EDA M F+ + ++++ SW ++I+ Q + ++
Sbjct: 203 KMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISAHEQCDDHDGTLR 262
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI-----KSEHGSHLIAQNAL 177
L+ +ML S V+P T +++ ACS L ++ GR++H ++I K+E+G ++ NA+
Sbjct: 263 LFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAI 322
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
+ MY K + +A +F + KDV SW MI ++ GY EAL F+ M +P+
Sbjct: 323 MDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMC-EAQIKPD 381
Query: 238 EFIFGSVFSACSN 250
F V SACS+
Sbjct: 382 VVTFVGVLSACSH 394
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 167/585 (28%), Positives = 283/585 (48%), Gaps = 45/585 (7%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
PS ++ L+ S+ +L + +H I+ + + L ++ +Y G L AR FD
Sbjct: 46 PSVFSSLLHQFSN--TLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFD 103
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
+ AMIAG +N Q + +L+ M + +T +KAC+ L +
Sbjct: 104 QCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEV 163
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G ++ ++ HL ++++ K + DA+ VF G+ KDV W S+I + +
Sbjct: 164 GMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQ 223
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC-------------------------- 248
G E++ F EM+ G +P+ ++ AC
Sbjct: 224 KGLFWESIQMFLEMIG-GGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVF 282
Query: 249 ---------SNF-----ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
SN A ++F+ + S L SWNA+I+G + E+ +LF +
Sbjct: 283 VLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSG 342
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
D T+ SL+ C L G +HS II+ +S++ + AI+ MY+KC + A
Sbjct: 343 SGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQAT 402
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+VF +GK + ++W +++ Q+ AE+ +LF +M ++ + +T ++ CA +
Sbjct: 403 IVFGRMGKK-NVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHL 461
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN-FMENPDVVSWSSL 473
SL +H + + G AFD + + L+D+Y KCG + SA KLFN DV+ +S+
Sbjct: 462 GSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSM 521
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I+GY G G AL +++RM + PN T V +LTACSH GLVEEG L+ ME ++
Sbjct: 522 IMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHD 581
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ P +H +C+VDL +RAG + EA++ + QM V ++LL+
Sbjct: 582 VRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLS 626
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 149/305 (48%), Gaps = 15/305 (4%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T LI CS L+ GR +H I+ + + +VL I++MY KCG+++ A + F +M
Sbjct: 349 TLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRM 408
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++NV++WTAM+ G SQN DA+KL+ QM + V T S++ C+ LGS+ GR
Sbjct: 409 GKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGR 468
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG-IARKDVTSWGSMIAAFSKL 215
+HAH I+ + + +ALI MY K +I A +F+ KDV SMI +
Sbjct: 469 TVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMH 528
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-----ARILFNEID-----SPDLA 265
G+ AL ++ M+ +PN+ F S+ +ACS+ + LF+ ++ P
Sbjct: 529 GHGRYALGVYSRMIEE-RLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHK 587
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
+ L+ + EA L +M P + +LL C G+Q+ +
Sbjct: 588 HYACLVDLHSRAGRLEEADELVKQM---PFQPSTDVLEALLSGCRTHKNTNMGIQIADRL 644
Query: 326 IKMGF 330
I + +
Sbjct: 645 ISLDY 649
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 157/347 (45%), Gaps = 41/347 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + ++ L+ E++ + +R P T A L+ AC ++G H ++L
Sbjct: 215 NSIIGGYVQKGLFWESIQMF-LEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVL 273
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
DV + +++MY G A + FD M R+++SW AMI+G QN ++
Sbjct: 274 ALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYA 333
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ +++QSG T S+I+ CS + GR LH+ +I+ E SHL+ A++ MY+
Sbjct: 334 LFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYS 393
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL---CHFNE------------ 227
K I A VF + +K+V +W +M+ S+ GY +AL C E
Sbjct: 394 KCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVS 453
Query: 228 MLH--------------HGAYQPNEFIFGSV--------FSACSNF--ARILF-NEIDSP 262
++H H + + + F +V ++ C A LF NE
Sbjct: 454 LVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLK 513
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
D+ N++I G H + A+ ++S M + L P+ T SLL AC
Sbjct: 514 DVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTAC 560
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
QN Y E + + T L+ C+ L SL GR VH H + D V
Sbjct: 425 QNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAV 484
Query: 72 LQNHILNMYGKCGSLEDARMGF-DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ + +++MY KCG + A F ++ ++V+ +MI G + A+ +Y +M++
Sbjct: 485 ITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEE 544
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
+ P Q TF S++ ACS G V G+ L H ++ +H
Sbjct: 545 RLKPNQTTFVSLLTACSHSGLVEEGKALF-HSMERDH 580
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 152/469 (32%), Positives = 240/469 (51%), Gaps = 45/469 (9%)
Query: 154 LGRQLHAHVIKS-EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
LGR HA +IK+ ++ N L+ MY+K DR A+ + S + V +W ++IA
Sbjct: 24 LGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGS 83
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIF-----------------------------GS 243
+ G AL HF+ M + QPN+F F
Sbjct: 84 VQNGRFTSALFHFSNM-RRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISD 142
Query: 244 VFSACSNF-----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
VF CS F AR +F+E+ ++A+WNA ++ ++A++ F E R
Sbjct: 143 VFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRH 202
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
P+ +T + L AC G L G Q+H ++++ GF+++V V N ++ Y KC +
Sbjct: 203 EGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGC 262
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
+ ++F + K D VSW S+I + +Q+++ E+ +F R I+P + V+ ACA
Sbjct: 263 SEIIFSGISKPND-VSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACA 321
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
++ LE+ +H K + ++FV + L+D+Y KCGS+ A + F+ M ++V+W++
Sbjct: 322 GLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNA 381
Query: 473 LILGYAQFGCGDEALKLFTRMR--SLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
+I GYA G D A+ LF M S V+PN VT V VL+ACS G V G+ ++ M
Sbjct: 382 MIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRG 441
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
YGI P EH +CVVDLL RAG V +A FI +M + VW +LL +
Sbjct: 442 RYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGA 490
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 219/494 (44%), Gaps = 47/494 (9%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQP-DVVLQNHILNMYGKCGSLEDARM 91
+ P++ A L+ + S + +LGR H I+ + P + NH++NMY K A++
Sbjct: 4 LSPNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQL 63
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
P R+VV+WTA+IAG QN + A+ + M + + P FTF KA L S
Sbjct: 64 LLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRS 123
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+G+Q+HA +K+ S + + MY+K +AR +F + +++ +W + ++
Sbjct: 124 PLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSN 183
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC------------------SNF-- 251
G +AL F E H G ++PN F + +AC S F
Sbjct: 184 SVLEGRYDDALTAFIEFRHEG-WEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEA 242
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
+ I+F+ I P+ SW ++I + +A +F R
Sbjct: 243 DVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRAR 302
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ P V S+L AC G L G VH+ +K N+ V +A++ MY KC +
Sbjct: 303 KEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIE 362
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML--ASQIKPDHITFNDVMG 409
+A F E+ + + V+WN++I QA+ LF M + ++ P+++TF V+
Sbjct: 363 DAERAFDEMPER-NLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLS 421
Query: 410 ACAKMASLEMVTQL-HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDV 467
AC++ S+ + ++ + G+ ++D+ + G + A + M P V
Sbjct: 422 ACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTV 481
Query: 468 VSWSSLILGYAQFG 481
W +L+ FG
Sbjct: 482 SVWGALLGASKMFG 495
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 181/403 (44%), Gaps = 49/403 (12%)
Query: 29 TNIR---IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
+N+R I+P+ T+ A SLRS +G++VH + + DV + +MY K
Sbjct: 97 SNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKA 156
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G E+AR FD+MP+RN+ +W A ++ + +DA+ +I+ G P TF + +
Sbjct: 157 GLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFL 216
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
AC+G + LGRQLH V++S + + N LI Y K ++ + +FSGI++ +
Sbjct: 217 NACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDV 276
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------ 251
SW SMI ++ + E +A F G +P +F+ SV SAC+
Sbjct: 277 SWCSMIVSYVQNDEEEKACLVFLRARKEG-IEPTDFMVSSVLSACAGLSVLEVGKSVHTL 335
Query: 252 ----------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEA 283
A F+E+ +L +WNA+I G A A+ A
Sbjct: 336 AVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMA 395
Query: 284 MSLFSEMR--DRELLPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAI 340
++LF EM + P+ +T +L AC ++ GM++ S + G + +
Sbjct: 396 VTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACV 455
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ + + ++ A K++ W +++ A ++E
Sbjct: 456 VDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSE 498
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 160/343 (46%), Gaps = 36/343 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAY-DFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
N Y+S+ + Y++AL A+ +F + T+ ++AC+ L+LGR++H +
Sbjct: 178 NAYLSNSVLEGRYDDALTAFIEFRHEGWEPNL--ITFCAFLNACAGASYLRLGRQLHGFV 235
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
L S + DV + N +++ YGKC + + + F + + N VSW +MI QN +E A
Sbjct: 236 LQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKAC 295
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
++++ + G+ P F S++ AC+GL + +G+ +H +K+ ++ +AL+ MY
Sbjct: 296 LVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMY 355
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML---HHGAYQPNE 238
K I DA F + +++ +W +MI ++ G A+ F+EM H A PN
Sbjct: 356 GKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVA--PNY 413
Query: 239 FIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
F V SACS + N M +F MR R +
Sbjct: 414 VTFVCVLSACSRAGSV--------------------------NVGMEIFESMRGRYGIEP 447
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
G ++ + +GR + + Q + +I KM V V A+L
Sbjct: 448 GAEHYACVVDLLGRAGMVE--QAYQFIKKMPIRPTVSVWGALL 488
>gi|242057857|ref|XP_002458074.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
gi|241930049|gb|EES03194.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
Length = 963
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 172/576 (29%), Positives = 307/576 (53%), Gaps = 25/576 (4%)
Query: 23 DFSQNNTNIRIRPS--TYAGLISACS-SLRSLQLGRKVHDHILLSKCQPDVVLQNHILNM 79
D + ++ I++RP+ T+ LI+A S S S + +V +L S C D+ + + +++
Sbjct: 259 DMQREDSRIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVSVLKSGCSSDLYVGSALVSA 318
Query: 80 YGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTF 139
+ + G +++A+ F + ++N V+ +I G + + +A+K+++ + V+ T+
Sbjct: 319 FARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTRNTIVVNAD-TY 377
Query: 140 GSIIKACSGLG----SVCLGRQLHAHVIKSEHGSHLIA-QNALIAMYTKFDRILDARNVF 194
++ A + + G++ H H++++ IA N L+ MY K I A +F
Sbjct: 378 VVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKIF 437
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV-------FSA 247
+ D SW ++I+A + G +L + + +H A + + SV +
Sbjct: 438 QLMEATDRISWNTIISALDQNGLKLLSA---GQQVHCDAVKWGLDLDTSVSNVLVKMYGE 494
Query: 248 CSNFARI--LFNEIDSPDLASWNALIAGVAS-HSNANEAMSLFSEMRDRELLPDGLTVHS 304
C + +FN + D SWN+++ +AS + +E + +F+ M L+P+ +T +
Sbjct: 495 CGAMSDCWKVFNSMADHDEVSWNSMMGVMASSQAPISETVEVFNNMMRGGLIPNKVTFVN 554
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
LL A L G Q H+ ++K G D NV V NA+++ YAK + + +F +
Sbjct: 555 LLAALSPLSVLELGKQFHAAVLKHGVMDDNV-VDNALISCYAKSGDMNSCEHLFSNMSGR 613
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
D+VSWNS+I+ + + +E ML S D TF+ ++ ACA +A+LE ++
Sbjct: 614 RDAVSWNSMISGYIYNGYLQEAMDCVWLMLHSGQIMDCCTFSIILNACASVAALERGMEM 673
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H + ++ L DV V + L+D+Y KCG + A KLFN M + SW+S+I GYA+ G G
Sbjct: 674 HAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLG 733
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
+AL+ F M SP+ VT V VL+ACSH GLVE GL + +M ++GI+P EH SC
Sbjct: 734 RKALETFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMP-DHGILPQIEHYSC 792
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
V+DLL RAG + + +++I +M + ++W+++L +
Sbjct: 793 VIDLLGRAGKIDKIKEYIQRMPMKPNALIWRTVLVA 828
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 157/581 (27%), Positives = 273/581 (46%), Gaps = 97/581 (16%)
Query: 57 VHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQ 116
+H ++ D+ L NH++N Y K L A FD+MPQRN VSWT +++G
Sbjct: 82 LHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQGI 141
Query: 117 ENDAIKLYIQML---QSGVMPGQFTFGSIIKACSGLGSVCLG--RQLHAHVIKSEHGSHL 171
+A +++ ML + G P FTFG++++AC G LG Q+H + K+E+ S+
Sbjct: 142 TEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYASNT 201
Query: 172 IAQNALIAMY---TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
NALI+MY T IL A+ VF G +D+ +W ++++ ++K G + F +M
Sbjct: 202 TVCNALISMYGSCTVGPPIL-AQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMDM 260
Query: 229 LHHGA---YQPNEFIFGSVFSACS-----------NFARILFNEIDSPDLASWNALIAGV 274
+ +P E FGS+ +A S F +L + S DL +AL++
Sbjct: 261 QREDSRIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVSVLKSGCSS-DLYVGSALVSAF 319
Query: 275 ASHSNANEAMSLFSEMRDRELLP-DGLTV----------------------------HSL 305
A H +EA +F ++++ + +GL V + +
Sbjct: 320 ARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTRNTIVVNADTYVV 379
Query: 306 LCACIGRLT-----LYQGMQVHSYIIKMGF-DSNVPVCNAILTMYAKCSVLCNALLVFKE 359
L + I + L +G + H ++++ G D + V N ++ MYAKC + +A +F +
Sbjct: 380 LLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKIF-Q 438
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
L + D +SWN+II+A Q+ +L S A Q
Sbjct: 439 LMEATDRISWNTIISALDQNG-----LKLLS---AGQ----------------------- 467
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL--ILGY 477
Q+HC K GL D V N L+ +Y +CG++ K+FN M + D VSW+S+ ++
Sbjct: 468 --QVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEVSWNSMMGVMAS 525
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
+Q E +++F M G+ PN VT V +L A S + ++E G + + ++G++
Sbjct: 526 SQAPI-SETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELGKQFHAAVL-KHGVMDD 583
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++ A++G ++ E + M+ D V W S+++
Sbjct: 584 NVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMIS 624
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 152/604 (25%), Positives = 267/604 (44%), Gaps = 54/604 (8%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQ-- 67
Q + EA + RP+ T+ L+ AC +LG H LLSK +
Sbjct: 139 QGITEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYA 198
Query: 68 PDVVLQNHILNMYGKC--GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ + N +++MYG C G A+ FD P R++++W A+++ ++ L++
Sbjct: 199 SNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFM 258
Query: 126 QMLQSG----VMPGQFTFGSIIKACS-GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
M + + P + TFGS+I A S GS + Q+ V+KS S L +AL++
Sbjct: 259 DMQREDSRIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVSVLKSGCSSDLYVGSALVSA 318
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
+ + I +A+++F + K+ + +I K EA+ F + + ++
Sbjct: 319 FARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTRNTIVVNADTYV 378
Query: 241 FGSVFSACSNFA--------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
+ SA + ++ +L + +A N L+ A + A +
Sbjct: 379 V--LLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKI 436
Query: 287 FSEMRDRELLPDGLTVHSLLCACI--GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
F M D ++ ++++ A G L G QVH +K G D + V N ++ MY
Sbjct: 437 FQLME----ATDRISWNTIISALDQNGLKLLSAGQQVHCDAVKWGLDLDTSVSNVLVKMY 492
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA--EELFRLFSRMLASQIKPDHI 402
+C + + VF + + D VSWNS++ + +QA E +F+ M+ + P+ +
Sbjct: 493 GECGAMSDCWKVFNSMADH-DEVSWNSMMGV-MASSQAPISETVEVFNNMMRGGLIPNKV 550
Query: 403 TFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
TF +++ A + ++ LE+ Q H + K G+ D V N L+ Y K G + S LF+ M
Sbjct: 551 TFVNLLAALSPLSVLELGKQFHAAVLKHGVMDDNVVDNALISCYAKSGDMNSCEHLFSNM 610
Query: 463 E-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
D VSW+S+I GY G EA+ M G + T +L AC+ V +E G
Sbjct: 611 SGRRDAVSWNSMISGYIYNGYLQEAMDCVWLMLHSGQIMDCCTFSIILNACASVAALERG 670
Query: 522 LHLYRIMENEYGIIPTREHC-------SCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
+ ++ +GI R H S +VD+ ++ G V A N M + W
Sbjct: 671 MEMH-----AFGI---RSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEF-SWN 721
Query: 575 SLLA 578
S+++
Sbjct: 722 SMIS 725
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 190/411 (46%), Gaps = 48/411 (11%)
Query: 37 TYAGLISAC--SSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
++ +ISA + L+ L G++VH + D + N ++ MYG+CG++ D F+
Sbjct: 447 SWNTIISALDQNGLKLLSAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFN 506
Query: 95 KMPQRNVVSWTAMIA-GCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
M + VSW +M+ S ++ ++++ M++ G++P + TF +++ A S L +
Sbjct: 507 SMADHDEVSWNSMMGVMASSQAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLE 566
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAF 212
LG+Q HA V+K + NALI+ Y K + ++FS ++ R+D SW SMI+ +
Sbjct: 567 LGKQFHAAVLKHGVMDDNVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISGY 626
Query: 213 SKLGYELEALCHFNEMLHHG---------------------------------AYQPNEF 239
GY EA+ MLH G ++ ++
Sbjct: 627 IYNGYLQEAMDCVWLMLHSGQIMDCCTFSIILNACASVAALERGMEMHAFGIRSHLESDV 686
Query: 240 IFGS----VFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RD 292
+ S ++S C ++A LFN + + SWN++I+G A H +A+ F EM R
Sbjct: 687 VVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKALETFEEMLRS 746
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
RE PD +T S+L AC + +G++ + G + + ++ + + +
Sbjct: 747 RE-SPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDK 805
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAE--ELFRLFSRMLASQIKPDH 401
+ + +++ W +++ AC Q EL R R+L +I+P +
Sbjct: 806 IKEYIQRMPMKPNALIWRTVLVACRQSKDGSKIELGREALRVLL-EIEPQN 855
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 158/488 (32%), Positives = 242/488 (49%), Gaps = 43/488 (8%)
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
M + +++A + S+ G QLHA ++K GS + N LI MY K ++ A
Sbjct: 1 MERRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGE 60
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC---- 248
VF G+ ++V SW +++ F G E L F EM G PNEF + AC
Sbjct: 61 VFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGT-SPNEFTLSATLKACGGGT 119
Query: 249 ----------------------------------SNFARILFNEIDSPDLASWNALIAGV 274
+ AR +F+ I S +LA+WN++I+G
Sbjct: 120 RAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGY 179
Query: 275 ASHSNANEAMSLFSEMRDR-ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD-- 331
A +++ +F EM+ R + PD T SLL AC G +G QVH+ + G
Sbjct: 180 AHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPA 239
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
SN + A+L +Y KC L A+ VF L + +++ W ++I Q Q +E LF R
Sbjct: 240 SNAILAGALLDVYVKCHRLPVAMQVFDGLERR-NAIQWTTVIVGHAQEGQVKEAMCLFRR 298
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
+S ++ D + V+ A A +E Q+HCY KT DV V N L+D+Y+KCG
Sbjct: 299 FWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGL 358
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
G A + F M +VVSW+++I G + G G EA+ LF M+ GV + V + +L+A
Sbjct: 359 TGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSA 418
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
CSH GLV+E + + + + P EH +C+VDLL RAG + EA++ I M + +
Sbjct: 419 CSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVG 478
Query: 572 VWKSLLAS 579
VW++LL++
Sbjct: 479 VWQTLLSA 486
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 216/488 (44%), Gaps = 53/488 (10%)
Query: 34 RPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
R A L+ A + SL+ G ++H ++ D +L N++++MY KCG L A F
Sbjct: 3 RRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVF 62
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
D MP+RNVVSWTA++ G + + + ++L+ +M SG P +FT + +KAC G
Sbjct: 63 DGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTR 120
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
G Q+H +++ H + N+L+ MY+K DAR VF I +++ +W SMI+ ++
Sbjct: 121 AGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYA 180
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------- 251
G ++L F EM QP+EF F S+ ACS
Sbjct: 181 HAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPAS 240
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
A +F+ ++ + W +I G A EAM LF
Sbjct: 241 NAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFW 300
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ DG + S++ + QG QVH Y K +V V N+++ MY KC +
Sbjct: 301 SSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTG 360
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A F+E+ + VSW ++I +H E LF M ++ D + + ++ AC
Sbjct: 361 EAGRRFREMPAR-NVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSAC 419
Query: 412 AKMASLEMVTQLHCYITK----TGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPD 466
+ +V + Y ++ + ++D+ + G L A++L M P
Sbjct: 420 SHSG---LVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPT 476
Query: 467 VVSWSSLI 474
V W +L+
Sbjct: 477 VGVWQTLL 484
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 155/352 (44%), Gaps = 18/352 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S ++L+ + Q + + T+A L+ ACS L + + G +VH +
Sbjct: 173 NSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMA 232
Query: 63 LSKCQP--DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
+ P + +L +L++Y KC L A FD + +RN + WT +I G +Q Q +A
Sbjct: 233 VRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEA 292
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ L+ + SGV S++ + V G+Q+H + K+ G + N+L+ M
Sbjct: 293 MCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDM 352
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K +A F + ++V SW +MI K G+ EA+ F EM G + +E
Sbjct: 353 YLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGV-EADEVA 411
Query: 241 FGSVFSACSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+ ++ SACS+ F+RI + P + ++ + EA L M
Sbjct: 412 YLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSM 471
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
+ P +LL AC + G +V ++ + D + PV +L+
Sbjct: 472 ---PMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAV--DGDNPVNYVMLS 518
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 143/477 (29%), Positives = 239/477 (50%), Gaps = 31/477 (6%)
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P +T + AC+ G V G Q+H+H +K +L +NAL+ MY+ + AR V
Sbjct: 104 PDTYTHPLLAAACAARGDVREGLQVHSHSVKHGFSDNLYLRNALMHMYSACGCVASARRV 163
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR 253
F D SW +++A + + G +A+ F M A + + AR
Sbjct: 164 FDAGPVWDAVSWNTILATYVRDGDVEQAVKVFTRMPERSAAAVSAMVALFARRGMVEEAR 223
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRL 313
+F+ + D +W A+++ + EA+++FS+MR+ D + S++ AC
Sbjct: 224 GVFDGAEHRDAFTWTAMVSCFERNDLFMEALAVFSDMREEGWPVDEAVMVSVVAACAKSG 283
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK--------------- 358
+ G H +++ G S V V N ++ MY+ C + A +F
Sbjct: 284 VIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSMIS 343
Query: 359 ---------------ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
++ + D+VSW+++IA C+ +NQ+ E +F M A +IKPD +T
Sbjct: 344 GYLKNGRVEDAKALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVT 403
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
V+ AC+ +++LE +H YI K + + L+D+Y+KCG + +A ++F+ +E
Sbjct: 404 LVSVISACSNLSALEQGKLVHEYIRKYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMLE 463
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS-PNLVTLVGVLTACSHVGLVEEGL 522
W+++I+G A G +L +F+ M + G + PN +T GVL+AC H GLVEEG
Sbjct: 464 EKGTPCWNAVIVGLAMNGLVTRSLDMFSEMEATGTAVPNEITFTGVLSACRHGGLVEEGR 523
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+++M+N+Y I+P H C+VDLL RAG V EAED I M D+ W +LL +
Sbjct: 524 QFFKLMQNKYQIVPNIRHYGCMVDLLGRAGYVREAEDMIQSMPMSPDVPAWGALLGA 580
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 186/399 (46%), Gaps = 35/399 (8%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
++ + G +E+AR FD R+ +WTAM++ +N +A+ ++ M + G +
Sbjct: 212 LFARRGMVEEARGVFDGAEHRDAFTWTAMVSCFERNDLFMEALAVFSDMREEGWPVDEAV 271
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
S++ AC+ G + G H V+++ GS + QN LI MY+ ++ AR +F
Sbjct: 272 MVSVVAACAKSGVIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGE 331
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE 258
D SW SMI+ + K G + A+ LF+
Sbjct: 332 SLDHFSWNSMISGYLKNGRVED-------------------------------AKALFDV 360
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ D SW+A+IAG ++ ++EA+++F MR E+ PD +T+ S++ AC L QG
Sbjct: 361 MPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNLSALEQG 420
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
VH YI K ++ + + +++ MY KC + AL VF L + + WN++I
Sbjct: 421 KLVHEYIRKYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMLEEKG-TPCWNAVIVGLAM 479
Query: 379 HNQAEELFRLFSRMLASQIK-PDHITFNDVMGACAKMASLEMVTQLHCYI-TKTGLAFDV 436
+ +FS M A+ P+ ITF V+ AC +E Q + K + ++
Sbjct: 480 NGLVTRSLDMFSEMEATGTAVPNEITFTGVLSACRHGGLVEEGRQFFKLMQNKYQIVPNI 539
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + G + A + M +PDV +W +L+
Sbjct: 540 RHYGCMVDLLGRAGYVREAEDMIQSMPMSPDVPAWGALL 578
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 157/369 (42%), Gaps = 45/369 (12%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
VS + +L+ EAL + + + +++AC+ +Q G H ++ +
Sbjct: 241 VSCFERNDLFMEALAVFS-DMREEGWPVDEAVMVSVVAACAKSGVIQNGEVCHGLVVRAG 299
Query: 66 CQPDVVLQNHILNMYGKC-------------------------------GSLEDARMGFD 94
V +QN +++MY C G +EDA+ FD
Sbjct: 300 LGSRVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSMISGYLKNGRVEDAKALFD 359
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
MP ++ VSW+AMIAGC N Q ++A+ ++ M + P T S+I ACS L ++
Sbjct: 360 VMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNLSALEQ 419
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+ +H ++ K ++ ++ +LI MY K + A VF + K W ++I +
Sbjct: 420 GKLVHEYIRKYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMLEEKGTPCWNAVIVGLAM 479
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNEID-SPDL 264
G +L F+EM G PNE F V SAC + F +++ N+ P++
Sbjct: 480 NGLVTRSLDMFSEMEATGTAVPNEITFTGVLSACRHGGLVEEGRQFFKLMQNKYQIVPNI 539
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
+ ++ + EA + M + PD +LL AC G +V
Sbjct: 540 RHYGCMVDLLGRAGYVREAEDMIQSM---PMSPDVPAWGALLGACWKHGDSEVGERVGKK 596
Query: 325 IIKMGFDSN 333
++K+ D +
Sbjct: 597 LVKLDPDHD 605
>gi|414589059|tpg|DAA39630.1| TPA: hypothetical protein ZEAMMB73_362613 [Zea mays]
Length = 692
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 247/465 (53%), Gaps = 34/465 (7%)
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQML-QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
+ +I+ C + + A+ Y +M+ + V P FT+ +++AC+ G++ LGR +H
Sbjct: 125 PYNVLISNCLNHGLPHHALAAYHEMIDKDAVPPDAFTYPKVLRACAETGNLALGRAVHVR 184
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
+ + HL QNAL++MY K + AR VF G+ +DV SW SMI+ ++ G +A
Sbjct: 185 AVDAGMDGHLFFQNALVSMYAKCWDLAAARTVFDGMEHRDVVSWNSMISGYAASGQWRKA 244
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNAN 281
+ F M GA E++S +WN + G +
Sbjct: 245 VELFLRMQAEGA------------------------EMNS---VTWNTIAGGYIQMHDYR 277
Query: 282 EAMSLFSEMRDRELLPDGLT--VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
A+ L +M D +T + S C+ G L L G ++H ++M V NA
Sbjct: 278 AAVGLIRDMVRGGASIDFVTLVIGSNACSRAGWLRL--GKEIHGLAVRMQCHEIDSVINA 335
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA-SQIK 398
++TMYA+C+ + AL++FK + + V+WN+ IA + AE RLF M+ ++
Sbjct: 336 VITMYARCNDMERALMLFKMI-RCPGLVAWNTTIAGFALLDDAEAASRLFREMVVCGDVQ 394
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKL 458
P+++T + CA++A+L+ +LH +I K G + N L+D+Y K G L A+ +
Sbjct: 395 PNYVTVVTYLALCARVANLQHGRELHTHIVKQGFKGYRLLWNSLIDMYSKSGRLSVAQNV 454
Query: 459 FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
F+ M++PD++S++S+I GY G G +L+ F +M G+ P+ + +V VL+ACSH GLV
Sbjct: 455 FDTMDDPDMISFTSMIAGYGMQGKGIISLRFFKQMIDSGIMPDAIIMVTVLSACSHSGLV 514
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
EG L+ M YGI P EH SC+VDL ARAG + +AE+ +NQ
Sbjct: 515 GEGEELFDKMVKSYGIKPQMEHYSCMVDLYARAGLLEKAEELLNQ 559
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 132/595 (22%), Positives = 233/595 (39%), Gaps = 138/595 (23%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S+ L + AL AY + + TY ++ AC+ +L LGR VH +
Sbjct: 127 NVLISNCLNHGLPHHALAAYHEMIDKDAVPPDAFTYPKVLRACAETGNLALGRAVHVRAV 186
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + QN +++MY KC L AR FD M R+VVSW +MI+G + + Q A++
Sbjct: 187 DAGMDGHLFFQNALVSMYAKCWDLAAARTVFDGMEHRDVVSWNSMISGYAASGQWRKAVE 246
Query: 123 LYIQMLQSGVMPGQFTFGSII-----------------------------------KACS 147
L+++M G T+ +I ACS
Sbjct: 247 LFLRMQAEGAEMNSVTWNTIAGGYIQMHDYRAAVGLIRDMVRGGASIDFVTLVIGSNACS 306
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
G + LG+++H ++ + NA+I MY + + + A +F I + +W +
Sbjct: 307 RAGWLRLGKEIHGLAVRMQCHEIDSVINAVITMYARCNDMERALMLFKMIRCPGLVAWNT 366
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------- 254
IA F+ L A F EM+ G QPN + + C+ A +
Sbjct: 367 TIAGFALLDDAEAASRLFREMVVCGDVQPNYVTVVTYLALCARVANLQHGRELHTHIVKQ 426
Query: 255 ---------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
+F+ +D PD+ S+ ++IAG ++ F
Sbjct: 427 GFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDPDMISFTSMIAGYGMQGKGIISLRFF 486
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILTMYAK 346
+M D ++PD + + ++L AC + +G ++ ++K G + + ++ +YA+
Sbjct: 487 KQMIDSGIMPDAIIMVTVLSACSHSGLVGEGEELFDKMVKSYGIKPQMEHYSCMVDLYAR 546
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL-----FRLFSRMLASQIKPDH 401
+L +AEEL F S M+A+ + H
Sbjct: 547 AGLL-----------------------------EKAEELLNQTPFPPTSTMVAALVGACH 577
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG---SLGSARKL 458
N ++G + LEM T+ + FV+ + ++Y G L + RKL
Sbjct: 578 EQGNIIIGERSARRLLEMKTENAGH----------FVL--IANMYAAAGCWNELATVRKL 625
Query: 459 ---FNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
M+ P ++W+ L G+ F GD RS ++P + ++ LT
Sbjct: 626 MRDLGVMKAPG-LAWADLGNGFTPFLVGD---------RSNPLAPEIYEVLDELT 670
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 165/579 (28%), Positives = 291/579 (50%), Gaps = 29/579 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ N+ EA +D N ++A +I+ + L+ R++ +
Sbjct: 83 NTMIAGYLHNNMVEEASELFDVMPERDNF-----SWALMITCYTRKGKLEKAREL---LE 134
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
L + D N ++ Y K G DA+ F++MP +++VS+ +M+AG +QN + + A++
Sbjct: 135 LVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQ 194
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ M + V+ +K+ G + QL + + ++ ++
Sbjct: 195 FFESMTERNVVSWNLMVAGYVKS----GDLSSAWQLFEKI----PNPNAVSWVTMLCGLA 246
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K+ ++ +AR +F + K+V SW +MIA + + EA+ F +M H + I G
Sbjct: 247 KYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIING 306
Query: 243 SVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
+ + AR ++N++ D+ + AL++G+ + +EA +FS +
Sbjct: 307 YIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSR----------IGA 356
Query: 303 HSLLC--ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
H ++C + I + M + + N N +++ YA+ + A +F+ +
Sbjct: 357 HDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAM 416
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
+ + VSWNS+IA LQ+N + + M KPD TF + ACA +A+L++
Sbjct: 417 -REKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVG 475
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
QLH YI K+G D+FV N L+ +Y KCG + SA ++F +E D++SW+SLI GYA
Sbjct: 476 NQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALN 535
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
G ++A K F +M S V P+ VT +G+L+ACSH GL +GL +++ M ++ I P EH
Sbjct: 536 GYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEH 595
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
SC+VDLL R G + EA + + M A+ +W SLL +
Sbjct: 596 YSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGA 634
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 138/555 (24%), Positives = 259/555 (46%), Gaps = 40/555 (7%)
Query: 33 IRPSTYAGLISACSSLRSLQLGR--KVHD--HILLSKCQPDVVLQNHILNMYGKCGSLED 88
IR AG + + + +QLG+ KV + I + ++V N ++++ K + D
Sbjct: 7 IRSIGEAGKHAFNHNRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRD 66
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ--FTFGSIIKAC 146
AR FD+M RN+VSW MIAG N +A +L+ VMP + F++ +I
Sbjct: 67 ARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELF------DVMPERDNFSWALMITCY 120
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
+ G + R+L V + NA+IA Y K + DA+ VF + KD+ S+
Sbjct: 121 TRKGKLEKARELLELVPDKLDTA---CWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYN 177
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLAS 266
SM+A +++ G AL F M N + G V S + A LF +I +P+ S
Sbjct: 178 SMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVS 237
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
W ++ G+A + EA LF M + + ++ ++++ + L + + +++
Sbjct: 238 WVTMLCGLAKYGKMAEARELFDRMPSKNV----VSWNAMIATYVQDLQVDEAVKLFK--- 290
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
KM +V I+ Y + L A V+ ++ D + ++++ +Q+ + +E
Sbjct: 291 KMPHKDSVS-WTTIINGYIRVGKLDEARQVYNQM-PCKDITAQTALMSGLIQNGRIDEAD 348
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT-KTGLAFDVFVMNGLMDI 445
++FSR+ A D + +N ++ ++ ++ L + K +++ N ++
Sbjct: 349 QMFSRIGAH----DVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSW-----NTMISG 399
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y + G + A ++F M ++VSW+SLI G+ Q +ALK M G P+ T
Sbjct: 400 YAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTF 459
Query: 506 VGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
L+AC+++ ++ G LH Y + + G + + ++ + A+ G V AE
Sbjct: 460 ACTLSACANLAALQVGNQLHEYIL---KSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRD 516
Query: 564 MACDADIVVWKSLLA 578
+ C D++ W SL++
Sbjct: 517 IEC-VDLISWNSLIS 530
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 186/455 (40%), Gaps = 102/455 (22%)
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
P+ V +L K G + +AR FD+MP +NVVSW AMIA Q+ Q ++A+KL+ +M
Sbjct: 233 PNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKM 292
Query: 128 LQ------SGVMPGQFTFGSIIKA--------CSGL--------GSVCLGRQLHAHVIKS 165
+ ++ G G + +A C + G + GR A + S
Sbjct: 293 PHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFS 352
Query: 166 EHGSH-LIAQNALIAMYTKFDRILDARNVF---------------SGIAR---------- 199
G+H ++ N++IA Y++ R+ +A N+F SG A+
Sbjct: 353 RIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEI 412
Query: 200 ------KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR 253
K++ SW S+IA F + L+AL M G +P++ F SAC+N A
Sbjct: 413 FQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGK-KPDQSTFACTLSACANLAA 471
Query: 254 I----------------------------------------LFNEIDSPDLASWNALIAG 273
+ +F +I+ DL SWN+LI+G
Sbjct: 472 LQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISG 531
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDS 332
A + AN+A F +M ++PD +T +L AC QG+ + +I+ +
Sbjct: 532 YALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEP 591
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE----ELFRL 388
+ ++ + + L A + + A++ W S++ AC H E RL
Sbjct: 592 LAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAERL 651
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
F L ++IT +++ + +E V L
Sbjct: 652 FE--LEPHNASNYITLSNMHAEAGRWEEVERVRML 684
>gi|242041975|ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
gi|241922236|gb|EER95380.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
Length = 1026
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 156/583 (26%), Positives = 293/583 (50%), Gaps = 44/583 (7%)
Query: 37 TYAGLISACSSLR-SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
T ++ +CS L + G VH I+ V + + +++MY K G L+ + + F
Sbjct: 343 TLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCC 402
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
++N + W +MI+G N + N A+ + +M +GV P T ++I C + +
Sbjct: 403 FTEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKDLHVA 462
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+ +HA+ +++ S+ NAL+AMY I + +F + + + SW +MI+ F+++
Sbjct: 463 KSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEI 522
Query: 216 GYELEALCHFNEMLHHGAY--------------QPNEFIFG------------------- 242
G +L F +M H + + I G
Sbjct: 523 GDSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLT 582
Query: 243 ----SVFSACS--NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
++++ C + LFN S + ++NAL++G ++ + + + LF++M +
Sbjct: 583 NALITMYANCGIVEAGQQLFNSFCSRNTITYNALMSGYRKNNVSEKILPLFTQMVKNDEK 642
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P+ +T+ +LL C +L QG +HSY ++ P+ + + MY++ + + +
Sbjct: 643 PNLVTLLNLLPVCQSQL---QGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRTI 699
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F L + + WN+ ++AC+Q QA+ + F ML ++PD +T ++ AC+++ +
Sbjct: 700 FS-LVSARNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALISACSQLGN 758
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
+ + I + G + ++ V+N L+D + +CGS+ AR+LF+ D V+W ++I
Sbjct: 759 ADFAACIMAVILQKGFSMNILVLNALIDTHSRCGSISFARELFDSSVEKDSVTWGAMINA 818
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y+ G G+ AL LF+ M GV P+ +T V +L+ACSH GLVE+G L++ ++ ++GI P
Sbjct: 819 YSMHGNGEAALDLFSMMIDSGVDPDDITFVSILSACSHNGLVEQGRTLFKSLQADHGITP 878
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EH +C+VDLL R G + EA D + M + +SLL +
Sbjct: 879 RMEHYACMVDLLGRTGHLDEAYDIVRSMPFTPSDNLLESLLGA 921
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 140/517 (27%), Positives = 245/517 (47%), Gaps = 43/517 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +I AC++ LQLGR+VH +L + +V +Q +L+MY K G ++ +R FD M
Sbjct: 141 TFPPVIRACTAASCLQLGRQVHCRVLRTGHGSNVGVQTALLDMYAKAGQIDVSRRVFDCM 200
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R+++SW AM++G S N +A++ +M Q G+ P T I+ C G G
Sbjct: 201 VLRDLISWNAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDRVAGD 260
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
LHA +K +ALI+MY FD + +R VF KD+ S+ SMI+A+ +
Sbjct: 261 SLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQHS 320
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
EA F ++H PN SV +CS+
Sbjct: 321 NWKEAFEVF-RLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQVSV 379
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+ +LF + WN++I+G ++ N A+ F +M+ +
Sbjct: 380 VSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAGV 439
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD TV +++ C L+ +H+Y ++ F+S V NA+L MYA C + +
Sbjct: 440 APDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYT 499
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F+++ +SWN++I+ + +E LF +M ++ D +T ++ + +
Sbjct: 500 LFQKMEVRM-LISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSE 558
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+ +H K+G DV + N L+ +Y CG + + ++LFN + + +++++L+
Sbjct: 559 DAIVGESVHSLAIKSGCISDVSLTNALITMYANCGIVEAGQQLFNSFCSRNTITYNALMS 618
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
GY + ++ L LFT+M PNLVTL+ +L C
Sbjct: 619 GYRKNNVSEKILPLFTQMVKNDEKPNLVTLLNLLPVC 655
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 148/573 (25%), Positives = 269/573 (46%), Gaps = 51/573 (8%)
Query: 50 SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ-RNVVSWTAMI 108
SL+ R++H + ++ D + ++ Y G A + F + + R V ++
Sbjct: 53 SLKCLREIHARLAVAGAIQDRFVVTGLVERYVSFGKPASAALLFAEAYRGRPAVYSLNLV 112
Query: 109 AGCSQNYQ-ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH 167
C ++ + + LY + G FTF +I+AC+ + LGRQ+H V+++ H
Sbjct: 113 VRCFSDHGFHRELLDLYRGL--CGFGSDNFTFPPVIRACTAASCLQLGRQVHCRVLRTGH 170
Query: 168 GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNE 227
GS++ Q AL+ MY K +I +R VF + +D+ SW +M++ +S G EA+ E
Sbjct: 171 GSNVGVQTALLDMYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSVNGCFREAVETLQE 230
Query: 228 M------------------------------LH----HGAYQPNEFIFGSVFSACSNF-- 251
M LH G +E + ++ S + F
Sbjct: 231 MQQCGMSPNASTLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDDESLTSALISMYAAFDD 290
Query: 252 ---ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCA 308
+R++F+ DL S+N++I+ HSN EA +F M + P+ +T+ S+L +
Sbjct: 291 LSSSRLVFDLQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPS 350
Query: 309 CIGRL-TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
C L + G VH IIK+G V V +A+++MY+K L ++ L+F + +++
Sbjct: 351 CSDLLFGINHGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEK-NNI 409
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
WNS+I+ L +N+ F +M + + PD T +V+ C L + +H Y
Sbjct: 410 LWNSMISGYLVNNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYA 469
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
+ VMN L+ +Y CG + ++ LF ME ++SW+++I G+A+ G + +L
Sbjct: 470 VRNRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEIGDSETSL 529
Query: 488 KLFTRMRSLGVSPNLVTLVGVLT--ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
LF +M V +LVTL+G+++ + S +V E +H I + G I + ++
Sbjct: 530 TLFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAI---KSGCISDVSLTNALI 586
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ A G V + N C + + + +L++
Sbjct: 587 TMYANCGIVEAGQQLFNSF-CSRNTITYNALMS 618
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/582 (21%), Positives = 266/582 (45%), Gaps = 46/582 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
ST G++ C S G +H L D L + +++MY L +R+ FD
Sbjct: 241 STLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDL 300
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG-LGSVCL 154
P +++VS+ +MI+ Q+ +A +++ M +GV P T S++ +CS L +
Sbjct: 301 QPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINH 360
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF-- 212
G +H +IK + +AL++MY+K ++ + +F K+ W SMI+ +
Sbjct: 361 GESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLV 420
Query: 213 -SKLGYELEALC---------------------------HFNEMLHHGAYQPNEFIFGSV 244
++ L+A C H + +H A + + SV
Sbjct: 421 NNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSV 480
Query: 245 FSA-------CSNFAR--ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+A C + + LF +++ L SWN +I+G A ++ +++LF +M E+
Sbjct: 481 MNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEV 540
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
D +T+ L+ + G VHS IK G S+V + NA++TMYA C ++
Sbjct: 541 WFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLTNALITMYANCGIVEAGQQ 600
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F +++++N++++ ++N +E++ LF++M+ + KP+ +T +++ C
Sbjct: 601 LFNSFCSR-NTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPNLVTLLNLLPVCQSQL 659
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+ + H Y + + + M +Y + ++ R +F+ + +++ W++ +
Sbjct: 660 QGKCI---HSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRTIFSLVSARNLIVWNAFLS 716
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
Q D + F M L V P+ VT++ +++ACS +G + + ++ + G
Sbjct: 717 ACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALISACSQLGNADFAACIMAVILQK-GFS 775
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ ++D +R G + A + + + + D V W +++
Sbjct: 776 MNILVLNALIDTHSRCGSISFARELFDS-SVEKDSVTWGAMI 816
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 126/574 (21%), Positives = 237/574 (41%), Gaps = 84/574 (14%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S N +N AL A+ Q + +T +IS C + L + + +H + +
Sbjct: 412 NSMISGYLVNNEWNMALDAFCKMQI-AGVAPDATTVINVISGCRYTKDLHVAKSIHAYAV 470
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ + + N +L MY CG + + F KM R ++SW MI+G ++ ++
Sbjct: 471 RNRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLT 530
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ QM V T +I + S +G +H+ IKS S + NALI MY
Sbjct: 531 LFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLTNALITMYA 590
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
+ + +F+ ++ ++ ++++ + K + L F +M+ + +PN
Sbjct: 591 NCGIVEAGQQLFNSFCSRNTITYNALMSGYRKNNVSEKILPLFTQMVKNDE-KPNLVTLL 649
Query: 243 SVFSACS--------------NFARI-----------------------LFNEIDSPDLA 265
++ C NF R+ +F+ + + +L
Sbjct: 650 NLLPVCQSQLQGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRTIFSLVSARNLI 709
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
WNA ++ A+ + F M + PD +T+ +L+ AC + + I
Sbjct: 710 VWNAFLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALISACSQLGNADFAACIMAVI 769
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
++ GF N+ V NA++ +++C + A +F DSV+W ++I A H E
Sbjct: 770 LQKGFSMNILVLNALIDTHSRCGSISFARELFDS-SVEKDSVTWGAMINAYSMHGNGEAA 828
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
LFS M+ S + PD ITF ++ AC+ NGL++
Sbjct: 829 LDLFSMMIDSGVDPDDITFVSILSACSH--------------------------NGLVE- 861
Query: 446 YIKCGSLGSARKLFNFME-----NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
R LF ++ P + ++ ++ + G DEA + +RS+ +P
Sbjct: 862 --------QGRTLFKSLQADHGITPRMEHYACMVDLLGRTGHLDEAYDI---VRSMPFTP 910
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIM-ENEYG 533
+ L +L AC G + G + +++ ++EYG
Sbjct: 911 SDNLLESLLGACRFHGNYKIGESVGKLLIKSEYG 944
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 157/492 (31%), Positives = 251/492 (51%), Gaps = 61/492 (12%)
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
I+++ ML G++P ++IK C+ L ++ G+Q+H + S G + ++L+ M
Sbjct: 59 IRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHM 118
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y +FD + DARNVF + + V + ++I+ F++ G E F YQ
Sbjct: 119 YVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELF--------YQ----- 165
Query: 241 FGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
R L E+ +L SWN +I+G + +A+ +F M L PDG
Sbjct: 166 -----------TRDLGVEL---NLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGT 211
Query: 301 TVHSLLCACIGRLTL-YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS----------- 348
+V S+L A +G L + G+Q+H Y+IK G + V +A++ MY KC+
Sbjct: 212 SVSSVLPA-VGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNE 270
Query: 349 --------------------VLCNALLVFKEL-GKNADSVSWNSIIAACLQHNQAEELFR 387
++ NAL VFK+ G + + VSW S+IA+C Q+ + E
Sbjct: 271 MDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALE 330
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
LF M +KP+ +T ++ AC +A+L HC+ + G+ DV+V + L+D+Y
Sbjct: 331 LFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYA 390
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
KCG + ++R F+ M N ++VSW+SL+ GYA G EA+ +F M+ G P+ V+
Sbjct: 391 KCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTC 450
Query: 508 VLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
VL+AC+ GL EEG + M +G+ EH SC+V LL R+G + EA I QM +
Sbjct: 451 VLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFE 510
Query: 568 ADIVVWKSLLAS 579
D VW +LL+S
Sbjct: 511 PDSCVWGALLSS 522
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 122/508 (24%), Positives = 208/508 (40%), Gaps = 126/508 (24%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
R+ P+ +I C++L +LQ G+++H L+S D V+ + +L+MY + L+DAR
Sbjct: 75 RVLPT----VIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARN 130
Query: 92 GFDKMPQR-----------------------------------NVVSWTAMIAGCSQNYQ 116
FDK+PQ N+VSW MI+G +++
Sbjct: 131 VFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGS 190
Query: 117 ENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA 176
DA+ ++ M G+ P + S++ A L +G Q+H +VIK G +A
Sbjct: 191 YLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSA 250
Query: 177 LIAMYTKFDRILDARNVF---------------SGIARK------------------DVT 203
LI MY K + VF +G++R +V
Sbjct: 251 LIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVV 310
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA----------- 252
SW SMIA+ S+ G ++EAL F EM G +PN + AC N A
Sbjct: 311 SWTSMIASCSQNGKDMEALELFREMQIEGV-KPNSVTIPCLLPACGNIAALLHGKAAHCF 369
Query: 253 -----------------------------RILFNEIDSPDLASWNALIAGVASHSNANEA 283
R+ F+ + + +L SWN+L+AG A H EA
Sbjct: 370 SLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEA 429
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACI-GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
+++F M+ PD ++ +L AC G LT S G ++ + + ++T
Sbjct: 430 INIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVT 489
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRLFSRMLAS 395
+ + L A + K++ DS W +++++C HN+ A+ +F L R
Sbjct: 490 LLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPG- 548
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQL 423
++I +++ + A ++MV +
Sbjct: 549 ----NYILLSNIYASKAMWVEVDMVRDM 572
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 155/352 (44%), Gaps = 52/352 (14%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRP--STYAGLISACSSLRSLQLGRKVHDH 60
N +S + Y +A++ + QN ++P ++ + ++ A L +G ++H +
Sbjct: 179 NGMISGFNRSGSYLDAVLMF---QNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCY 235
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ---------------------- 98
++ PD + + +++MYGKC + F++M +
Sbjct: 236 VIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNA 295
Query: 99 -----------RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
NVVSWT+MIA CSQN ++ +A++L+ +M GV P T ++ AC
Sbjct: 296 LEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACG 355
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGS 207
+ ++ G+ H +++ + + +ALI MY K R+L +R F + +++ SW S
Sbjct: 356 NIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNS 415
Query: 208 MIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARILFN 257
++A ++ G EA+ F E++ +P+ F V SAC+ F + N
Sbjct: 416 LMAGYAMHGKTFEAINIF-ELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRN 474
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+ ++ ++ + EA ++ +M PD +LL +C
Sbjct: 475 HGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQM---PFEPDSCVWGALLSSC 523
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 1/166 (0%)
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
N + R+FS ML I PD V+ CA +++L+ Q+HC+ +GL D V+
Sbjct: 53 NHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVL 112
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
+ L+ +Y++ L AR +F+ + P VV+ S+LI +A+ G E +LF + R LGV
Sbjct: 113 SSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVE 172
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
NLV+ G+++ + G + + +++ M E G+ P S V+
Sbjct: 173 LNLVSWNGMISGFNRSGSYLDAVLMFQNMHLE-GLKPDGTSVSSVL 217
>gi|302804037|ref|XP_002983771.1| hypothetical protein SELMODRAFT_180422 [Selaginella moellendorffii]
gi|300148608|gb|EFJ15267.1| hypothetical protein SELMODRAFT_180422 [Selaginella moellendorffii]
Length = 492
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 158/506 (31%), Positives = 252/506 (49%), Gaps = 64/506 (12%)
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
MYG+CG L AR FD + + N+ SW ++A N + A++L+ M Q G+ T
Sbjct: 1 MYGRCGELSRAREAFDAIEEPNLFSWAILMAAYVLNGHDRAALRLFRAMDQQGIPAESAT 60
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
S I A +G+G + L R + V + T DRI + +G A
Sbjct: 61 LVSAIGAIAGIGDLALARAIEVRVRR-----------------TVLDRI-----IVAGGA 98
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE 258
R DV +MI FSK G +EAL +F+
Sbjct: 99 RSDVIVETAMINMFSKCGAVIEALA-------------------------------VFDR 127
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
I +L SWNA+I A + + EA+ L+ M + + D T S+L AC +L +G
Sbjct: 128 IQDRNLVSWNAMITAFAQNGHRREAVELYRRMEEEGIRADESTYPSVLGAC---QSLAEG 184
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
+H+ I G + +V V +A+++M+ + L A VF + ++ + ++W ++I+A Q
Sbjct: 185 RSIHARICSAGLELDVVVGSALVSMHGRFGALEAARDVFDRM-EHKNVITWCAMISAYAQ 243
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+ + F+RM +IKP+ +TF V+ AC+ + LE+ +H I + G + V
Sbjct: 244 NGHPRQALDGFARM--GRIKPNSVTFLAVLEACSLLGDLEIGRGVHGQIVEAGFDGEENV 301
Query: 439 MNGLMDIYIKCGSLGSARKLFNF-----MENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
NGL+++Y KCGS AR +F+ + VVSW+S+I YAQ G +EA+++F M
Sbjct: 302 SNGLINMYGKCGSWSDARVVFDAARRSSLRRNTVVSWNSMIEAYAQLGHANEAVEVFQEM 361
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
R G P+ VT + ++ ACSH GLVE+G+ + M + + P+ +H +VDLL RAG
Sbjct: 362 RLDGTKPDQVTFLEMMFACSHAGLVEQGIFCFLSMVRDERLTPSGDHWRSLVDLLGRAGW 421
Query: 554 VHEAEDFINQMACDADIVVWKSLLAS 579
+ AE + MA AD V W +L+ +
Sbjct: 422 IRGAEQVVKDMAGSADPVAWTTLIGA 447
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 197/407 (48%), Gaps = 68/407 (16%)
Query: 35 PSTYAGLISACSSLRSL-----------QLGRKVHDHILLSK-CQPDVVLQNHILNMYGK 82
P+ A L+SA ++ + ++ R V D I+++ + DV+++ ++NM+ K
Sbjct: 55 PAESATLVSAIGAIAGIGDLALARAIEVRVRRTVLDRIIVAGGARSDVIVETAMINMFSK 114
Query: 83 CGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSI 142
CG++ +A FD++ RN+VSW AMI +QN +A++LY +M + G+ + T+ S+
Sbjct: 115 CGAVIEALAVFDRIQDRNLVSWNAMITAFAQNGHRREAVELYRRMEEEGIRADESTYPSV 174
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
+ AC L GR +HA + + ++ +AL++M+ +F + AR+VF + K+V
Sbjct: 175 LGACQSLAE---GRSIHARICSAGLELDVVVGSALVSMHGRFGALEAARDVFDRMEHKNV 231
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------- 249
+W +MI+A+++ G+ +AL F M G +PN F +V ACS
Sbjct: 232 ITWCAMISAYAQNGHPRQALDGFARM---GRIKPNSVTFLAVLEACSLLGDLEIGRGVHG 288
Query: 250 ---------------------------NFARILFNEIDSPDL-----ASWNALIAGVASH 277
+ AR++F+ L SWN++I A
Sbjct: 289 QIVEAGFDGEENVSNGLINMYGKCGSWSDARVVFDAARRSSLRRNTVVSWNSMIEAYAQL 348
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
+ANEA+ +F EMR PD +T ++ AC + QG + ++ + + P
Sbjct: 349 GHANEAVEVFQEMRLDGTKPDQVTFLEMMFACSHAGLVEQG--IFCFLSMVRDERLTPSG 406
Query: 338 N---AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
+ +++ + + + A V K++ +AD V+W ++I AC+ H +
Sbjct: 407 DHWRSLVDLLGRAGWIRGAEQVVKDMAGSADPVAWTTLIGACMIHGR 453
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 15/192 (7%)
Query: 32 RIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
RI+P+ T+ ++ ACS L L++GR VH I+ + + + N ++NMYGKCGS DA
Sbjct: 259 RIKPNSVTFLAVLEACSLLGDLEIGRGVHGQIVEAGFDGEENVSNGLINMYGKCGSWSDA 318
Query: 90 RMGFD-----KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
R+ FD + + VVSW +MI +Q N+A++++ +M G P Q TF ++
Sbjct: 319 RVVFDAARRSSLRRNTVVSWNSMIEAYAQLGHANEAVEVFQEMRLDGTKPDQVTFLEMMF 378
Query: 145 ACSGLGSVCLGRQLHAHVIKSEH----GSHLIAQNALIAMYTKFDRILDARNVFSGIA-R 199
ACS G V G +++ E G H +L+ + + I A V +A
Sbjct: 379 ACSHAGLVEQGIFCFLSMVRDERLTPSGDHW---RSLVDLLGRAGWIRGAEQVVKDMAGS 435
Query: 200 KDVTSWGSMIAA 211
D +W ++I A
Sbjct: 436 ADPVAWTTLIGA 447
>gi|125525878|gb|EAY73992.1| hypothetical protein OsI_01877 [Oryza sativa Indica Group]
Length = 870
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 151/530 (28%), Positives = 262/530 (49%), Gaps = 45/530 (8%)
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN--DAIKLYIQMLQSGVM 133
++ +Y K D+R F+++ +++V++T+MI G S+ +A ++ MLQ+ +
Sbjct: 145 LIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWNAFEIATDMLQNNLE 204
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG-SHLIAQNALIAMYTKFDRILDARN 192
+ T S+++ LG++ G+ LH + I+ G S I + +++ YT+ A
Sbjct: 205 INRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQSAAT 264
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF- 251
V ++ V SW ++++ ++ G A+ + MLH P+ F +V SAC+
Sbjct: 265 VLQN-SKGTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAELC 323
Query: 252 ---------------------------------------ARILFNEIDSPDLASWNALIA 272
++ LF+++ D+ S+NA+I
Sbjct: 324 YFCFAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKYLFDQLIIKDVVSYNAMIY 383
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G + ANEA SL + M + PD TV SLL A + L +G +H + I+ GF S
Sbjct: 384 GYLQNDMANEATSLLNYMMAEGVAPDFATVLSLLAAFADQRDLVRGRWIHGFAIRHGFCS 443
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
+V V N IL MY+ C + A +F L K + VSW +++ CL + A+E+ +LF M
Sbjct: 444 DVDVENQILYMYSACGKIAAARAIFDSLEKK-NLVSWTAMMKGCLSNGHADEVVQLFQVM 502
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
KPD ++ + A + + L + Q+HC++ ++ L D N L+ Y KCG L
Sbjct: 503 QKYGEKPDSVSLVTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITANSLISAYAKCGKL 562
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
+ LF ++ ++ +W+++I YA G L++F +M + P+ +T VLTAC
Sbjct: 563 DLSAGLFFSLKYRNLDTWNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVLTAC 622
Query: 513 SHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
SH GLV++G ++ M + Y ++P EH C+VDLL RAG + + FI
Sbjct: 623 SHAGLVKDGWRIFNSMTSVYSVLPQEEHYGCMVDLLGRAGHLEDGYKFIK 672
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 209/442 (47%), Gaps = 51/442 (11%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDH-ILLSKCQPDVVLQ 73
+N +A D QNN + I T L+ +L +LQ G+ +H + I + D +L+
Sbjct: 189 WNAFEIATDMLQNN--LEINRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILE 246
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML-QSGV 132
I+N Y +CG+ + A + V SW A+++G ++ Q +AI+ ML + V
Sbjct: 247 TSIVNFYTRCGAYQSAATVLQN-SKGTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKV 305
Query: 133 MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARN 192
P TF +++ AC+ L C +HA+ I+ ++ ALI +YTK R++ ++
Sbjct: 306 TPDSVTFANVLSACAELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKY 365
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN--------------- 237
+F + KDV S+ +MI + + EA N M+ G P+
Sbjct: 366 LFDQLIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGV-APDFATVLSLLAAFADQR 424
Query: 238 -----EFIFG------------------SVFSACSNF--ARILFNEIDSPDLASWNALIA 272
+I G ++SAC AR +F+ ++ +L SW A++
Sbjct: 425 DLVRGRWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAARAIFDSLEKKNLVSWTAMMK 484
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM-QVHSYIIKMGFD 331
G S+ +A+E + LF M+ PD +++ + + A + L G+ Q+H ++ + +
Sbjct: 485 GCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQA-VSDLGHLNGLKQIHCFVYRSLLE 543
Query: 332 SNVPVCNAILTMYAKCSVL-CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+ N++++ YAKC L +A L F +N D +WN++I+A H + +F
Sbjct: 544 KDKITANSLISAYAKCGKLDLSAGLFFSLKYRNLD--TWNAMISAYAMHGFHINVLEMFK 601
Query: 391 RMLASQIKPDHITFNDVMGACA 412
+M I+PD +TF+ V+ AC+
Sbjct: 602 QMEEENIQPDELTFSTVLTACS 623
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/522 (23%), Positives = 226/522 (43%), Gaps = 92/522 (17%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A L C+ +R L +K+H ++ DV+L + IL+ Y G+L ++R+ F K+
Sbjct: 52 ALLFQGCADVRFL---KKIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKIVN 108
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
++ W + + + ++GV
Sbjct: 109 DDISLWNSAM----------------VDYFRAGV-------------------------- 126
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL--G 216
HA +K + ++LI +Y+KF + D+R VF I KD+ ++ SMI +S+
Sbjct: 127 HADSLKLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDS 186
Query: 217 YELEALCHFNEMLHH-------------------GAYQPN-------------------E 238
A +ML + GA Q E
Sbjct: 187 IAWNAFEIATDMLQNNLEINRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILE 246
Query: 239 FIFGSVFSACSNF---ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRE 294
+ ++ C + A +L N + +ASWNAL++G+ + A+ M + +
Sbjct: 247 TSIVNFYTRCGAYQSAATVLQNSKGT--VASWNALLSGLNRAGQSFNAIQYLPVMLHEHK 304
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ PD +T ++L AC +H+Y I+ +V + A++ +Y KC+ + +
Sbjct: 305 VTPDSVTFANVLSACAELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSK 364
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F +L D VS+N++I LQ++ A E L + M+A + PD T ++ A A
Sbjct: 365 YLFDQLIIK-DVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPDFATVLSLLAAFADQ 423
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
L +H + + G DV V N ++ +Y CG + +AR +F+ +E ++VSW++++
Sbjct: 424 RDLVRGRWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAARAIFDSLEKKNLVSWTAMM 483
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
G G DE ++LF M+ G P+ V+LV + A S +G
Sbjct: 484 KGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQAVSDLG 525
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 116/215 (53%), Gaps = 1/215 (0%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T L++A + R L GR +H + DV ++N IL MY CG + AR FD
Sbjct: 411 ATVLSLLAAFADQRDLVRGRWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAARAIFDS 470
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ ++N+VSWTAM+ GC N ++ ++L+ M + G P + + ++A S LG +
Sbjct: 471 LEKKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQAVSDLGHLNGL 530
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+Q+H V +S I N+LI+ Y K ++ + +F + +++ +W +MI+A++
Sbjct: 531 KQIHCFVYRSLLEKDKITANSLISAYAKCGKLDLSAGLFFSLKYRNLDTWNAMISAYAMH 590
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
G+ + L F +M QP+E F +V +ACS+
Sbjct: 591 GFHINVLEMFKQMEEEN-IQPDELTFSTVLTACSH 624
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 105/263 (39%), Gaps = 51/263 (19%)
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
++H+ + G +V + + IL+ YA L + LVF+++ N D WNS +
Sbjct: 66 KIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKI-VNDDISLWNSAMV----- 119
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+ FR +H K L+ + FV
Sbjct: 120 ----DYFR---------------------------------AGVHADSLKLALSGNKFVG 142
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF--GCGDEALKLFTRMRSLG 497
+ L+ +Y K +R +F + N D+V+++S+I GY++ A ++ T M
Sbjct: 143 SSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWNAFEIATDMLQNN 202
Query: 498 VSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
+ N VTLV +L ++G ++EG LH Y I G+ S +V+ R G
Sbjct: 203 LEINRVTLVSLLQIAGNLGALQEGKSLHCYSI-RRAIGVSDDILETS-IVNFYTRCGAYQ 260
Query: 556 EAEDFINQMACDADIVVWKSLLA 578
A + + W +LL+
Sbjct: 261 SAATVLQN--SKGTVASWNALLS 281
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 165/549 (30%), Positives = 276/549 (50%), Gaps = 42/549 (7%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNM--YGKCGSLEDARMGFDK 95
Y L+ C ++ + +++H I+ + V +Q+ +++ G L A F++
Sbjct: 31 YLNLLEKCKNINTF---KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEE 87
Query: 96 MPQR---NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
Q NV W ++I G S + ++ L+ +ML GV P TF + K+C+ +
Sbjct: 88 NQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKAT 147
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+QLHAH +K + ++I MY + AR VF + +D S+ ++I
Sbjct: 148 HEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALIT-- 205
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
G V C + AR LF+EI D+ SWNA+I+
Sbjct: 206 -----------------------------GYVSQGCLDDARRLFDEIPVKDVVSWNAMIS 236
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G EA+ F EM++ +LP+ T+ +L AC + G + S++ GF S
Sbjct: 237 GYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGS 296
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N+ + NA++ MY KC A +F + + D +SWN++I + EE LF M
Sbjct: 297 NLQLTNALIDMYCKCGETDIARELFDGI-EEKDVISWNTMIGGYSYLSLYEEALALFEVM 355
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGS 451
L S +KP+ +TF ++ ACA + +L++ +H YI K + + + L+D+Y KCG
Sbjct: 356 LRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGC 415
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV-SPNLVTLVGVLT 510
+ +A ++F M + ++ SW++++ G+A G + AL LF+ M + G+ P+ +T VGVL+
Sbjct: 416 IEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLS 475
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
AC+ GLV+ G +R M +YGI P +H C++DLLARA EAE + M + D
Sbjct: 476 ACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDG 535
Query: 571 VVWKSLLAS 579
+W SLL++
Sbjct: 536 AIWGSLLSA 544
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 183/408 (44%), Gaps = 55/408 (13%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ P + +I +S+ + R V D L D V ++ Y G L+DAR
Sbjct: 162 LHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLR----DAVSFTALITGYVSQGCLDDAR 217
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD++P ++VVSW AMI+G Q+ + +AI + +M ++ V+P + T ++ AC
Sbjct: 218 RLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTR 277
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
S LG+ + + V + GS+L NALI MY K AR +F GI KDV SW +MI
Sbjct: 278 SGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIG 337
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------- 249
+S L EAL F ML +PN+ F + AC+
Sbjct: 338 GYSYLSLYEEALALFEVMLRSNV-KPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRN 396
Query: 250 --------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
A +F + S +LASWNA+++G A H +A A++LFSE
Sbjct: 397 SSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSE 456
Query: 290 MRDRELL-PDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKC 347
M ++ L PD +T +L AC + G Q S I G + ++ + A+
Sbjct: 457 MVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARA 516
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEELFRL 388
A ++ K + D W S+++AC H + AE LF+L
Sbjct: 517 EKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQL 564
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 165/318 (51%), Gaps = 15/318 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + + EA+V + + N+ ST ++SAC RS +LG+ + +
Sbjct: 232 NAMISGYVQSGRFEEAIVCF-YEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVR 290
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ ++ L N +++MY KCG + AR FD + +++V+SW MI G S +A+
Sbjct: 291 DNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALA 350
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKS-EHGSHLIAQNALIAMY 181
L+ ML+S V P TF I+ AC+ LG++ LG+ +HA++ K+ + S+ +LI MY
Sbjct: 351 LFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMY 410
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K I A VF + +++ SW +M++ F+ G+ AL F+EM++ G ++P++ F
Sbjct: 411 AKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITF 470
Query: 242 GSVFSACSN----------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
V SAC+ F ++ + SP L + +I +A EA L M+
Sbjct: 471 VGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEIL---MK 527
Query: 292 DRELLPDGLTVHSLLCAC 309
+ E+ PDG SLL AC
Sbjct: 528 NMEMEPDGAIWGSLLSAC 545
>gi|302809936|ref|XP_002986660.1| hypothetical protein SELMODRAFT_124564 [Selaginella moellendorffii]
gi|300145548|gb|EFJ12223.1| hypothetical protein SELMODRAFT_124564 [Selaginella moellendorffii]
Length = 691
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 159/562 (28%), Positives = 279/562 (49%), Gaps = 35/562 (6%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRP--STYAGLISACSSLRSLQLGRKVHDHIL- 62
+S+ ++ + EAL + Q + RP +++ ISACS R L+ G+ +H
Sbjct: 102 ISAFAQRGQHREALDLFHAMQQCGDGSSRPDKTSFVVAISACSETRDLEQGKSIHASFAG 161
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+++ + DV + + ++NMY KCG L A F +MP++++V+W MIA + +++
Sbjct: 162 VNEIETDVAVASTLVNMYNKCGDLPQACRIFARMPEKSLVTWNIMIAAYIHHGFPTKSLQ 221
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH-GSHLIAQNALIAMY 181
L QM G+ P + TF + + CS LG + G+ +H+ + ++ ALI MY
Sbjct: 222 LLDQMQLEGIRPQKVTFINSLNGCSILGKLRPGKTIHSCAAEQRLIDRDVVLSTALITMY 281
Query: 182 TKFDRILDARNVFSGIAR--KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
+K + +AR +F +A K+ SW +M+A +++ +A+ F M
Sbjct: 282 SKCGSVDEARKIFDSMAGDVKNTISWNAMLAGYAQNSRSSDAIQLFRSM----------- 330
Query: 240 IFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
L + D+ W ++ G + + A+ LF EMR + PD
Sbjct: 331 --------------DLEAQCKEEDVVLWTTMLGGYSDRGDHAAALELFREMR---IKPDA 373
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+ + + AC ++ G ++ + I G +S+ V A+ M+A+ +L A +F
Sbjct: 374 IAFVAAIDACANAGSIRDGEEILARIRGCGCESDDRVGTALCYMFAQFGLLDRASQIFDR 433
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
L ++ ++SWN+++ A A E LF RML +PD ITF ++ +SL
Sbjct: 434 L-ESKSAISWNAMLGAMAAQGLAIEAMELFRRMLGEGSRPDEITFAAMLDCFVGQSSLGE 492
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
+H I ++G VF+ L+++Y KCGSL + +F + + + +SW++LI +A
Sbjct: 493 GRFVHGLIAESGRDRGVFLGTALLNMYGKCGSLADSIAIFANLSHRNTISWNALIAAHAS 552
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTRE 539
G E+L LF +++ G N +T V+ AC H GL + G +M ++GI+P E
Sbjct: 553 NGRFLESLDLFQELQNEGFLANTITFQSVIAACGHAGLADRGCDYMVLMIEDHGIVPLPE 612
Query: 540 HCSCVVDLLARAGCVHEAEDFI 561
H C++DLL RAG + EAED +
Sbjct: 613 HYGCMIDLLGRAGWLGEAEDLV 634
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGC 482
+H + + GL D F+ + ++ +Y++ GSL AR+L + D W+++I +AQ G
Sbjct: 51 IHADLVRDGLDRDEFLASYVIHMYLRLGSLYDARQLLRQFDLDDTGLWTTMISAFAQRGQ 110
Query: 483 GDEALKLFTRMRSLG---VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTRE 539
EAL LF M+ G P+ + V ++ACS +E+G ++ I
Sbjct: 111 HREALDLFHAMQQCGDGSSRPDKTSFVVAISACSETRDLEQGKSIHASFAGVNEIETDVA 170
Query: 540 HCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
S +V++ + G + +A +M + +V W ++A+
Sbjct: 171 VASTLVNMYNKCGDLPQACRIFARMP-EKSLVTWNIMIAA 209
>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial [Vitis vinifera]
Length = 773
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 168/585 (28%), Positives = 296/585 (50%), Gaps = 54/585 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T A ++ AC +LG ++H + S V + N ++NMY K G + A + F+ +
Sbjct: 82 TVAIVLKACCG--DSKLGCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENL 139
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++VSW +++G ++ +DA+ ++M +GV T +++ CS G
Sbjct: 140 NNPDIVSWNTVLSGFQRS---DDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGF 196
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
QLH+ ++K + NALI MY++ R+++AR VF + KD+ SW +M++ +++ G
Sbjct: 197 QLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEG 256
Query: 217 YE-LEALCHFNEMLHHGAY--------------QPNEFIFG------------------- 242
LEA+ F EML G EF G
Sbjct: 257 NSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVC 316
Query: 243 ----SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
S +S C + A+++F I ++ SW +I+ + +A SLF+EMR +
Sbjct: 317 NVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMIS-----ISEEDATSLFNEMRRDGVY 371
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P+ +T L+ A + + +G +H +K F S + V N+++TMYAK + +++ V
Sbjct: 372 PNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKV 431
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F+EL + +SWNS+I+ Q+ +E + F L + +P+ TF V+ + A +
Sbjct: 432 FEELNYR-EIISWNSLISGYAQNGLWQEALQTFLSALM-ESRPNEFTFGSVLSSIASAEA 489
Query: 417 LEMV--TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+ M + H +I K GL + V + L+D+Y K GS+ + +F+ + V+W+++I
Sbjct: 490 ISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAII 549
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
+A+ G + + LF M GV P+ +T + V+TAC G+V+ G L+ M ++ I
Sbjct: 550 SAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLI 609
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P+ EH S +VD+L RAG + EAE+F+ Q+ A + V +SLL +
Sbjct: 610 EPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGA 654
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 230/502 (45%), Gaps = 82/502 (16%)
Query: 3 NDYVSSLCKQNLYNEALVAYD---------------------------FSQNNTNIRIRP 35
N ++ CK L++ ALV ++ N T +
Sbjct: 117 NSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRSDDALNFALRMNFTGVAFDA 176
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
T +++ CS G ++H IL +V + N ++ MY +C L +AR FD+
Sbjct: 177 VTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDE 236
Query: 96 MPQRNVVSWTAMIAGCSQNYQEN-DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
M +++VSW AM++G +Q +AI ++++ML+ G+ +F I AC L
Sbjct: 237 MRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFEL 296
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
GRQ+H+ +K + +H+ N LI+ Y+K + I DA+ VF I ++V SW +MI+
Sbjct: 297 GRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISI--- 353
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIF--------------------------------- 241
E +A FNEM G Y PN+ F
Sbjct: 354 --SEEDATSLFNEMRRDGVY-PNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELN 410
Query: 242 --GSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLF--SEMRD 292
S+ + + F + +F E++ ++ SWN+LI+G A + EA+ F + M
Sbjct: 411 VSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALMES 470
Query: 293 RELLPDGLTVHSLLC--ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
R P+ T S+L A +++ G + HS+I+K+G ++N V +A+L MYAK +
Sbjct: 471 R---PNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSI 527
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
C +L VF E + V+W +II+A +H E + LF M +KPD ITF V+ A
Sbjct: 528 CESLGVFSETPLK-NEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITA 586
Query: 411 CAKMASLEMVTQLHCYITKTGL 432
C + ++ QL + K L
Sbjct: 587 CGRKGMVDTGYQLFNSMVKDHL 608
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 146/539 (27%), Positives = 253/539 (46%), Gaps = 74/539 (13%)
Query: 93 FDKMPQRNVVSWT-AMIAGCSQNYQENDAIKLYIQMLQSGVMPG--QFTFGSIIKACSGL 149
D+ PQ + S +M+ +N +A+ L+ + LQ G + Q T ++KAC G
Sbjct: 35 LDQSPQTTIASLNRSMLTALRRNLSL-EALDLFKKQLQWGFVGNIDQVTVAIVLKACCGD 93
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK---FDRILDARNVFSGIARKDVTSWG 206
LG Q+HA I S SH+ N+L+ MY K FDR L VF + D+ SW
Sbjct: 94 SK--LGCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRAL---VVFENLNNPDIVSWN 148
Query: 207 SMIAAFSK----LGYELE-----------------ALCHFNEMLHHGAYQPNEFIFG--- 242
++++ F + L + L A C +E G +Q + I
Sbjct: 149 TVLSGFQRSDDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFG-FQLHSRILKCGL 207
Query: 243 -----------SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNAN-EAMSLFS 288
+++S C AR +F+E+ + DL SWNA+++G A N+ EA+ +F
Sbjct: 208 DCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFL 267
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCS 348
EM + D ++ + AC G Q+HS +K+G+D++V VCN +++ Y+KC
Sbjct: 268 EMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCE 327
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVM 408
+ +A LVF+ + + + VSW ++I+ E+ LF+ M + P+ +TF ++
Sbjct: 328 DIEDAKLVFESI-IDRNVVSWTTMISI-----SEEDATSLFNEMRRDGVYPNDVTFVGLI 381
Query: 409 GACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVV 468
A +E +H KT ++ V N L+ +Y K S+ + K+F + +++
Sbjct: 382 HAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREII 441
Query: 469 SWSSLILGYAQFGCGDEALKLFTR--MRSLGVSPNLVTLVGVLTACSHVGLV--EEGL-- 522
SW+SLI GYAQ G EAL+ F M S PN T VL++ + + G
Sbjct: 442 SWNSLISGYAQNGLWQEALQTFLSALMES---RPNEFTFGSVLSSIASAEAISMRHGQRC 498
Query: 523 --HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
H+ ++ N I+ S ++D+ A+ G + E+ ++ + V W +++++
Sbjct: 499 HSHILKLGLNTNPIV-----SSALLDMYAKRGSICESLGVFSETPLKNE-VAWTAIISA 551
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQL--GRKVH 58
N +S + L+ EAL + + + RP+ T+ ++S+ +S ++ + G++ H
Sbjct: 444 NSLISGYAQNGLWQEALQTF----LSALMESRPNEFTFGSVLSSIASAEAISMRHGQRCH 499
Query: 59 DHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
HIL + ++ + +L+MY K GS+ ++ F + P +N V+WTA+I+ +++
Sbjct: 500 SHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYE 559
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ---- 174
+ L+ M + GV P TF ++I AC G V G QL ++K HLI
Sbjct: 560 AVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVK----DHLIEPSPEH 615
Query: 175 -NALIAMYTKFDRILDARNVFSGI 197
++++ M + R+ +A I
Sbjct: 616 YSSMVDMLGRAGRLKEAEEFVGQI 639
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 161/515 (31%), Positives = 265/515 (51%), Gaps = 37/515 (7%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY-IQMLQSGVMPGQFTFGSIIKACSGLGS 151
FD + R+V +W MI+G + ++ I+ + + ML SG+ P TF S++KAC +
Sbjct: 42 FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---T 98
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
V G ++H +K + +LI +Y+++ + +AR +F + +D+ SW +MI+
Sbjct: 99 VIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISG 158
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---NFAR--------------- 253
+ + G EAL L +G + S+ SAC+ +F R
Sbjct: 159 YCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLES 213
Query: 254 -------ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
+F+ + DL SWN++I + A+SLF EMR + PD LT+ SL
Sbjct: 214 ELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLA 273
Query: 307 CACIGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
+ V + ++ G F ++ + NA++ MYAK ++ +A VF L N D
Sbjct: 274 SILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL-PNTD 332
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLAS-QIKPDHITFNDVMGACAKMASLEMVTQLH 424
+SWN+II+ Q+ A E +++ M +I + T+ V+ AC++ +L +LH
Sbjct: 333 VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 392
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
+ K GL DVFV+ L D+Y KCG L A LF + + V W++LI + G G+
Sbjct: 393 GRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 452
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV 544
+A+ LF M GV P+ +T V +L+ACSH GLV+EG + +M+ +YGI P+ +H C+
Sbjct: 453 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCM 512
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
VD+ RAG + A FI M+ D +W +LL++
Sbjct: 513 VDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 547
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 196/427 (45%), Gaps = 63/427 (14%)
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF 251
+ F I +DV +W MI+ + + G E + F+ + P+ F SV AC
Sbjct: 40 HTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV 99
Query: 252 -------------------------------------ARILFNEIDSPDLASWNALIAGV 274
ARILF+E+ D+ SWNA+I+G
Sbjct: 100 IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 159
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
NA EA++L + +R D +TV SLL AC +G+ +HSY IK G +S
Sbjct: 160 CQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE- 214
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
+ C + + + V D +SWNSII A + Q LF M
Sbjct: 215 --------LLRDCQKVFDRMYV-------RDLISWNSIIKAYELNEQPLRAISLFQEMRL 259
Query: 395 SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF-DVFVMNGLMDIYIKCGSLG 453
S+I+PD +T + +++ + + + + G D+ + N ++ +Y K G +
Sbjct: 260 SRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVD 319
Query: 454 SARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNLVTLVGVLTAC 512
SAR +FN++ N DV+SW+++I GYAQ G EA++++ M G ++ N T V VL AC
Sbjct: 320 SARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPAC 379
Query: 513 SHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
S G + +G+ L+ R+++N G+ + + D+ + G + +A Q+ + V
Sbjct: 380 SQAGALRQGMKLHGRLLKN--GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSV 436
Query: 572 VWKSLLA 578
W +L+A
Sbjct: 437 PWNTLIA 443
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 219/484 (45%), Gaps = 72/484 (14%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ AC R++ G K+H L DV + ++++Y + ++ +AR+ FD+M
Sbjct: 88 TFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM 144
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLY--IQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
P R++ SW AMI+G Q+ +A+ L ++ + S T S++ AC+ G
Sbjct: 145 PVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDS------VTVVSLLSACTEAGDFNR 198
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G +H++ IK S L+ D + VF + +D+ SW S+I A+
Sbjct: 199 GVTIHSYSIKHGLESELLR---------------DCQKVFDRMYVRDLISWNSIIKAYEL 243
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------- 251
L A+ F EM QP+ S+ S S
Sbjct: 244 NEQPLRAISLFQEM-RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDI 302
Query: 252 ------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
AR +FN + + D+ SWN +I+G A + A+EA+ +++ M +
Sbjct: 303 TIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEE 362
Query: 294 -ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
E+ + T S+L AC L QGM++H ++K G +V V ++ MY KC L +
Sbjct: 363 GEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLED 422
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
AL +F ++ + +SV WN++IA H E+ LF ML +KPDHITF ++ AC+
Sbjct: 423 ALSLFYQIPR-VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS 481
Query: 413 KMASLEMVTQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSW 470
++ T G+ + ++D+Y + G L +A K M PD W
Sbjct: 482 HSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIW 541
Query: 471 SSLI 474
+L+
Sbjct: 542 GALL 545
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 181/446 (40%), Gaps = 66/446 (14%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS-TYAGLISACSSLRSLQLGRKVHDHI 61
N +S C+ EAL + +R S T L+SAC+ G +H +
Sbjct: 153 NAMISGYCQSGNAKEALTL------SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYS 206
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ + ++ L D + FD+M R+++SW ++I N Q AI
Sbjct: 207 IKHGLESEL---------------LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 251
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI-KSEHGSHLIAQNALIAM 180
L+ +M S + P T S+ S LG + R + + K + NA++ M
Sbjct: 252 SLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVM 311
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K + AR VF+ + DV SW ++I+ +++ G+ EA+ +N M G N+
Sbjct: 312 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 371
Query: 241 FGSVFSACSNFARI----------------------------------------LFNEID 260
+ SV ACS + LF +I
Sbjct: 372 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 431
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ WN LIA H + +A+ LF EM D + PD +T +LL AC + +G
Sbjct: 432 RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 491
Query: 321 VHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+ G ++ ++ MY + L AL K + D+ W ++++AC H
Sbjct: 492 CFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVH 551
Query: 380 NQAEELFRLFSRMLASQIKPDHITFN 405
+L ++ S L +++P+H+ ++
Sbjct: 552 GNV-DLGKIASEHLF-EVEPEHVGYH 575
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 147/330 (44%), Gaps = 25/330 (7%)
Query: 1 FSNDYVSSLCKQN-------LYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSL 51
F YV L N L + L A Q RI+P T L S S L +
Sbjct: 223 FDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDI 282
Query: 52 QLGRKVHDHILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
+ R V L D+ + N ++ MY K G ++ AR F+ +P +V+SW +I+G
Sbjct: 283 RACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISG 342
Query: 111 CSQNYQENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGS 169
+QN ++AI++Y M + G + Q T+ S++ ACS G++ G +LH ++K+
Sbjct: 343 YAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL 402
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
+ +L MY K R+ DA ++F I R + W ++IA G+ +A+ F EML
Sbjct: 403 DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEML 462
Query: 230 HHGAYQPNEFIFGSVFSACSN----------FARILFNEIDSPDLASWNALIAGVASHSN 279
G +P+ F ++ SACS+ F + + +P L + ++
Sbjct: 463 DEGV-KPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQ 521
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
A+ M L PD +LL AC
Sbjct: 522 LETALKFIKSM---SLQPDASIWGALLSAC 548
>gi|326498517|dbj|BAJ98686.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 647
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 154/494 (31%), Positives = 250/494 (50%), Gaps = 42/494 (8%)
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+ LY + S P +T + AC+ V GRQ+ +H I+ G L +NAL+ M
Sbjct: 91 LPLYTSLPAS---PDTYTHPILAAACAARRDVSEGRQVQSHAIRHGFGDDLYLRNALMHM 147
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y+ + DAR VF D SW +++AA+ G +A+ F M A + +
Sbjct: 148 YSVCGCLWDARRVFDAGPVWDAVSWNTILAAYVHAGDVDQAVGVFARMPKRNATAVSSMV 207
Query: 241 --FGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP- 297
FG AR +F+E + D+ +W A+I+ + EA+ +FS MR RE+ P
Sbjct: 208 SLFGR--RGMVEEARGVFDEAECRDIFTWTAMISCFERNDMFAEALHMFSCMR-REMWPV 264
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC---------- 347
D + S++ AC + G H +I+ G S + + N ++ MY+ C
Sbjct: 265 DEALMVSVVAACAQSEVIRNGELCHGLVIRAGLCSLLNIQNVLIHMYSCCLDVVAARRLF 324
Query: 348 -SVLC--------------------NALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
S C NA+ +F + + D+VSW+++I+ C+Q+NQ+
Sbjct: 325 DSGDCLDQFSWNSMIAGYLKNGHVENAMTLFSAM-PDKDNVSWSTMISGCVQNNQSSHAL 383
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
+F M A ++PD +T V+ AC +++LE +H Y+ + + + L+D+Y
Sbjct: 384 TVFDNMRAQGVRPDEVTIVSVISACTNLSALEKGKSVHDYVRQNKCYITLVLGTSLIDMY 443
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS-PNLVTL 505
+KCG L +A +FN ME W+++I+G A G ++L++F+ M + + PN +T
Sbjct: 444 MKCGYLEAAMDVFNIMEEKGAPCWNAVIVGLAMNGLVTKSLEIFSEMEASSTAIPNEITF 503
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
GVL+AC H GLVEEG H +++M+++Y I+P H C+VDLL RAG V EAED I M
Sbjct: 504 TGVLSACRHAGLVEEGRHFFKLMQHKYQIVPNIRHYGCMVDLLGRAGYVKEAEDLIESMP 563
Query: 566 CDADIVVWKSLLAS 579
D+ W +LL +
Sbjct: 564 MSPDVPAWGALLGA 577
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 211/513 (41%), Gaps = 99/513 (19%)
Query: 29 TNIRIRPSTYAG--LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
T++ P TY L +AC++ R + GR+V H + D+ L+N +++MY CG L
Sbjct: 95 TSLPASPDTYTHPILAAACAARRDVSEGRQVQSHAIRHGFGDDLYLRNALMHMYSVCGCL 154
Query: 87 EDARMGFD-------------------------------KMPQRN--------------- 100
DAR FD +MP+RN
Sbjct: 155 WDARRVFDAGPVWDAVSWNTILAAYVHAGDVDQAVGVFARMPKRNATAVSSMVSLFGRRG 214
Query: 101 ----------------VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
+ +WTAMI+ +N +A+ ++ M + + S++
Sbjct: 215 MVEEARGVFDEAECRDIFTWTAMISCFERNDMFAEALHMFSCMRREMWPVDEALMVSVVA 274
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
AC+ + G H VI++ S L QN LI MY+ ++ AR +F D S
Sbjct: 275 ACAQSEVIRNGELCHGLVIRAGLCSLLNIQNVLIHMYSCCLDVVAARRLFDSGDCLDQFS 334
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDL 264
W SMIA + K G+ A+ LF+ + D
Sbjct: 335 WNSMIAGYLKNGHVENAM-------------------------------TLFSAMPDKDN 363
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
SW+ +I+G ++ ++ A+++F MR + + PD +T+ S++ AC L +G VH Y
Sbjct: 364 VSWSTMISGCVQNNQSSHALTVFDNMRAQGVRPDEVTIVSVISACTNLSALEKGKSVHDY 423
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
+ + + + +++ MY KC L A+ VF + + + WN++I + +
Sbjct: 424 VRQNKCYITLVLGTSLIDMYMKCGYLEAAMDVFNIMEEKG-APCWNAVIVGLAMNGLVTK 482
Query: 385 LFRLFSRMLASQIK-PDHITFNDVMGACAKMASLEMVTQLHCYIT-KTGLAFDVFVMNGL 442
+FS M AS P+ ITF V+ AC +E + K + ++ +
Sbjct: 483 SLEIFSEMEASSTAIPNEITFTGVLSACRHAGLVEEGRHFFKLMQHKYQIVPNIRHYGCM 542
Query: 443 MDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
+D+ + G + A L M +PDV +W +L+
Sbjct: 543 VDLLGRAGYVKEAEDLIESMPMSPDVPAWGALL 575
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 119/246 (48%), Gaps = 13/246 (5%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N ++ Y K G +E+A F MP ++ VSW+ MI+GC QN Q + A+ ++ M GV
Sbjct: 336 NSMIAGYLKNGHVENAMTLFSAMPDKDNVSWSTMISGCVQNNQSSHALTVFDNMRAQGVR 395
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P + T S+I AC+ L ++ G+ +H +V +++ L+ +LI MY K + A +V
Sbjct: 396 PDEVTIVSVISACTNLSALEKGKSVHDYVRQNKCYITLVLGTSLIDMYMKCGYLEAAMDV 455
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC----- 248
F+ + K W ++I + G ++L F+EM PNE F V SAC
Sbjct: 456 FNIMEEKGAPCWNAVIVGLAMNGLVTKSLEIFSEMEASSTAIPNEITFTGVLSACRHAGL 515
Query: 249 ----SNFARILFNEID-SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
+F +++ ++ P++ + ++ + EA L M + PD
Sbjct: 516 VEEGRHFFKLMQHKYQIVPNIRHYGCMVDLLGRAGYVKEAEDLIESM---PMSPDVPAWG 572
Query: 304 SLLCAC 309
+LL AC
Sbjct: 573 ALLGAC 578
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 12/218 (5%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + N + AL +D + +R T +ISAC++L +L+ G+ VHD++ +K
Sbjct: 370 ISGCVQNNQSSHALTVFD-NMRAQGVRPDEVTIVSVISACTNLSALEKGKSVHDYVRQNK 428
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
C +VL +++MY KCG LE A F+ M ++ W A+I G + N +++++
Sbjct: 429 CYITLVLGTSLIDMYMKCGYLEAAMDVFNIMEEKGAPCWNAVIVGLAMNGLVTKSLEIFS 488
Query: 126 QM-LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN-----ALIA 179
+M S +P + TF ++ AC G V GR H K + I N ++
Sbjct: 489 EMEASSTAIPNEITFTGVLSACRHAGLVEEGR----HFFKLMQHKYQIVPNIRHYGCMVD 544
Query: 180 MYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLG 216
+ + + +A ++ + DV +WG+++ A K G
Sbjct: 545 LLGRAGYVKEAEDLIESMPMSPDVPAWGALLGACWKHG 582
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 171/609 (28%), Positives = 307/609 (50%), Gaps = 58/609 (9%)
Query: 23 DFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILL----SKCQPDVVLQNHI 76
D + ++ I++RP+ T+ LI+A S V D +L+ S C D+ + + +
Sbjct: 260 DMQRGDSRIQLRPTEHTFGSLITAASLSSGSS---AVLDQVLVWVLKSGCSSDLYVGSAL 316
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
++ + + G ++A+ F + Q+N V+ +I G + +A+K+++ ++ V
Sbjct: 317 VSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGT-RNTVDVNA 375
Query: 137 FTFGSIIKACSGLG----SVCLGRQLHAHVIKSEHGSHLIA-QNALIAMYTKFDRILDAR 191
T+ ++ A + + +GR +H H++++ IA N L+ MY K I A
Sbjct: 376 DTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESAS 435
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF 251
+F + D SW ++I+A + G EA+ H++ ++ P+ F S S+C+
Sbjct: 436 KIFQLMEATDRISWNTIISALDQNGNCEEAVMHYS-LMRQSCISPSNFALISSLSSCAGL 494
Query: 252 ARI----------------------------------------LFNEIDSPDLASWNALI 271
+ +FN + D SWN ++
Sbjct: 495 KLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMM 554
Query: 272 AGVAS-HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
+AS + +E + +F+ M L+P+ +T +LL A L G QVH+ ++K G
Sbjct: 555 GVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGV 614
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+ V NA+++ YAK + + +F + D++SWNS+I+ + + +E
Sbjct: 615 MEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVW 674
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
M+ S D TF+ ++ ACA +A+LE +LH + ++ L DV V + L+D+Y KCG
Sbjct: 675 LMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCG 734
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ A KLFN M + SW+S+I GYA+ G G +A+++F M SP+ VT V VL+
Sbjct: 735 RVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLS 794
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSH GLVE GL + +M ++GI+P EH SCV+DLL RAG + + +++I +M + +
Sbjct: 795 ACSHAGLVERGLEYFEMMP-DHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNA 853
Query: 571 VVWKSLLAS 579
++W+++L +
Sbjct: 854 LIWRTVLVA 862
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 163/580 (28%), Positives = 276/580 (47%), Gaps = 62/580 (10%)
Query: 57 VHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQ 116
+H ++ D+ L NH++N Y K L A FD+MP+RN VSWT +++G +
Sbjct: 83 LHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGI 142
Query: 117 ENDAIKLYIQML---QSGVMPGQFTFGSIIKACSGLGSVCLG--RQLHAHVIKSEHGSHL 171
+A +++ ML Q+G P FTFG++++AC G LG Q+H V K+E+ S+
Sbjct: 143 AEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNT 202
Query: 172 IAQNALIAMY---TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
NALI+MY T IL A+ VF G +D+ +W ++++ ++K G F +M
Sbjct: 203 TVCNALISMYGSCTVGPPIL-AQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDM 261
Query: 229 LHHGA---YQPNEFIFGSVF----------------------SACSN-----------FA 252
+ +P E FGS+ S CS+ FA
Sbjct: 262 QRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFA 321
Query: 253 R--------ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR-ELLPDGLTV- 302
R +F + + + N LI G+ + EA+ +F R+ ++ D V
Sbjct: 322 RHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVVL 381
Query: 303 -HSLLCACIGRLTLYQGMQVHSYIIKMGF-DSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
+L I L G VH ++++ G D + V N ++ MYAKC + +A +F +L
Sbjct: 382 LSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIF-QL 440
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
+ D +SWN+II+A Q+ EE +S M S I P + + +CA + L
Sbjct: 441 MEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAG 500
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL--ILGYA 478
Q+HC K GL D V N L+ +Y +CG++ K+FN M D VSW+++ ++ +
Sbjct: 501 QQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASS 560
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
Q E +K+F M G+ PN VT + +L A S + ++E G ++ + ++G++
Sbjct: 561 QTPIS-EIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVM-KHGVMEDN 618
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++ A++G + E M+ D + W S+++
Sbjct: 619 VVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMIS 658
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 130/525 (24%), Positives = 233/525 (44%), Gaps = 52/525 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACS----SLRSLQLGRKVH 58
N + L +Q+ EA+ + ++N ++ TY L+SA + S L++GR VH
Sbjct: 345 NGLIVGLVRQDFSEEAVKIFVGTRNTVDVN--ADTYVVLLSALAEYSISEEGLRIGRVVH 402
Query: 59 DHILLSKCQP-DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQE 117
H+L + + + N ++NMY KCG++E A F M + +SW +I+ QN
Sbjct: 403 GHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNC 462
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
+A+ Y M QS + P F S + +C+GL + G+Q+H +K N L
Sbjct: 463 EEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVL 522
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCH-FNEMLHHGAYQP 236
+ MY + + D VF+ +A D SW +M+ + + + FN M+ G P
Sbjct: 523 VKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMM-RGGLIP 581
Query: 237 NEFIFGSVFSACSNFA-----------------------------------------RIL 255
N+ F ++ +A S + +
Sbjct: 582 NKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLF 641
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
N D D SWN++I+G + N EAM M + D T +L AC L
Sbjct: 642 TNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAAL 701
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
+GM++H++ I+ +S+V V +A++ MY+KC + A +F + + + SWNS+I+
Sbjct: 702 ERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQR-NEFSWNSMISG 760
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
+H + +F ML S+ PDH+TF V+ AC+ +E + + G+
Sbjct: 761 YARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQ 820
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLILGYAQ 479
+ + ++D+ + G + ++ M P+ + W ++++ Q
Sbjct: 821 IEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQ 865
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 155/609 (25%), Positives = 271/609 (44%), Gaps = 75/609 (12%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQ--PDVVLQNHILNMYGKC--GSLE 87
RP+ T+ L+ AC +LG V H L+SK + + + N +++MYG C G
Sbjct: 162 RPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPI 221
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG-----VMPGQFTFGSI 142
A+ FD P R++++W A+++ ++ L+ M Q G + P + TFGS+
Sbjct: 222 LAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDM-QRGDSRIQLRPTEHTFGSL 280
Query: 143 IK-ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
I A GS + Q+ V+KS S L +AL++ + + +A+++F + +K+
Sbjct: 281 ITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKN 340
Query: 202 VTSWGSMIAAFSKLGYELEALCHF------------------------------------ 225
+ +I + + EA+ F
Sbjct: 341 AVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRV 400
Query: 226 --NEMLHHGAYQPNEFI---FGSVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHS 278
ML G + ++++ C A +F +++ D SWN +I+ + +
Sbjct: 401 VHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNG 460
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
N EA+ +S MR + P + S L +C G L G QVH +K G D + V N
Sbjct: 461 NCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSN 520
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA-CLQHNQAEELFRLFSRMLASQI 397
++ MY +C + + VF + ++ D VSWN+++ E+ ++F+ M+ +
Sbjct: 521 VLVKMYGECGAMSDYWKVFNSMAEH-DEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGL 579
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
P+ +TF +++ A + ++ LE+ Q+H + K G+ D V N L+ Y K G +GS
Sbjct: 580 IPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEH 639
Query: 458 LF-NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
LF N + D +SW+S+I GY G EA+ M G + T +L AC+ V
Sbjct: 640 LFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVA 699
Query: 517 LVEEGLHLYRIMENEYGIIPTREHC-------SCVVDLLARAGCVHEAEDFINQMACDAD 569
+E G+ L+ +GI R H S +VD+ ++ G V A N M +
Sbjct: 700 ALERGMELH-----AFGI---RSHLESDVVVESALVDMYSKCGRVDYASKLFNSMT-QRN 750
Query: 570 IVVWKSLLA 578
W S+++
Sbjct: 751 EFSWNSMIS 759
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 208/443 (46%), Gaps = 51/443 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGL--ISACSSLRSLQLGRKVHDH 60
N +S+L + EA++ Y + + I PS +A + +S+C+ L+ L G++VH
Sbjct: 450 NTIISALDQNGNCEEAVMHYSLMRQSC---ISPSNFALISSLSSCAGLKLLTAGQQVHCD 506
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIA-GCSQNYQEND 119
+ D + N ++ MYG+CG++ D F+ M + + VSW M+ S ++
Sbjct: 507 AVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISE 566
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
+K++ M++ G++P + TF +++ A S L + LG+Q+HA V+K + NALI+
Sbjct: 567 IVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALIS 626
Query: 180 MYTKFDRILDARNVFSGIA-RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG------ 232
Y K + ++F+ ++ R+D SW SMI+ + G EA+ M+H G
Sbjct: 627 CYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCC 686
Query: 233 ---------------------------AYQPNEFIFGS----VFSACS--NFARILFNEI 259
++ ++ + S ++S C ++A LFN +
Sbjct: 687 TFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSM 746
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ SWN++I+G A H +A+ +F EM R RE PD +T S+L AC + +G
Sbjct: 747 TQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRE-SPDHVTFVSVLSACSHAGLVERG 805
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
++ + G + + ++ + + + + + +++ W +++ AC Q
Sbjct: 806 LEYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQ 865
Query: 379 HNQAE--ELFRLFSRMLASQIKP 399
+L R SR+L +I+P
Sbjct: 866 SKDGSNIDLGREASRVLL-EIEP 887
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 170/360 (47%), Gaps = 25/360 (6%)
Query: 237 NEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL- 295
N + G+ +A S +F+E+ + SW L++G H A EA +F M RE+
Sbjct: 104 NSYAKGARLAAASQ----VFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAML-REVQ 158
Query: 296 ---LPDGLTVHSLLCACI--GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
P T +LL AC G L +QVH + K + SN VCNA+++MY C+V
Sbjct: 159 AGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVG 218
Query: 351 CNALL--VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS----QIKPDHITF 404
L VF D ++WN++++ + F LF M Q++P TF
Sbjct: 219 PPILAQRVFDGTPIR-DLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTF 277
Query: 405 NDVMGACAKMASLEMV-TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
++ A + + V Q+ ++ K+G + D++V + L+ + + G A+ +F ++
Sbjct: 278 GSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLK 337
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
+ V+ + LI+G + +EA+K+F R+ V N T V +L+A + + EEGL
Sbjct: 338 QKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNT-VDVNADTYVVLLSALAEYSISEEGLR 396
Query: 524 LYRIMEN---EYGIIPTREHCS-CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ R++ G+ + S +V++ A+ G + A M D + W +++++
Sbjct: 397 IGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEA-TDRISWNTIISA 455
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 243/488 (49%), Gaps = 53/488 (10%)
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
+++ C S + +H HV+K+ + + L+ +Y K + DAR VF + R++
Sbjct: 73 LLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRN 132
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------- 254
V +W +++ F + A+ F EML+ G+Y P+ + +V ACS+ +
Sbjct: 133 VVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSY-PSVYTLSAVLHACSSLQSLKLGDQFH 191
Query: 255 ---------------------------------LFNEIDSPDLASWNALIAGVASHSNAN 281
F+ I ++ SW + ++ A +
Sbjct: 192 AYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPV 251
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
+ + LF EM ++ P+ T+ S L C L+L G QV+S IK G++SN+ V N++L
Sbjct: 252 KGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLL 311
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH-----------NQAEELFRLFS 390
+Y K + A +F + +A V+WN++IA Q ++ E +LFS
Sbjct: 312 YLYLKSGCIVEAHRLFNRM-DDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFS 370
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
++ S +KPD T + V+ C++M ++E Q+H KTG DV V L+ +Y KCG
Sbjct: 371 KLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCG 430
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
S+ A K F M +++W+S+I G++Q G +AL +F M GV PN VT VGVL+
Sbjct: 431 SIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLS 490
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSH G+V + L+ + IM+ +Y I P +H C+VD+ R G + +A +FI +M +
Sbjct: 491 ACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSE 550
Query: 571 VVWKSLLA 578
+W + +A
Sbjct: 551 FIWSNFIA 558
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 152/502 (30%), Positives = 242/502 (48%), Gaps = 65/502 (12%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y L+ C RS + VH H++ + C + + + ++N+Y KCG++EDAR FD M
Sbjct: 70 YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+RNVV+WT ++ G QN Q AI ++ +ML +G P +T +++ ACS L S+ LG Q
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQ 189
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
HA++IK +AL ++Y+K R+ DA FS I K+V SW S ++A + G
Sbjct: 190 FHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGA 249
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGS----------------VFSACSNF---------- 251
++ L F EM+ +PNEF S V+S C F
Sbjct: 250 PVKGLRLFVEMIAVDI-KPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRN 308
Query: 252 --------------ARILFNEIDSPDLASWNALIAG-----------VASHSNANEAMSL 286
A LFN +D + +WNA+IAG +++ +EA+ L
Sbjct: 309 SLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKL 368
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
FS++ + PD T+ S+L C L + QG Q+H+ IK GF S+V V ++++MY+K
Sbjct: 369 FSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSK 428
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
C + A F E+ ++W S+I QH +++ +F M + ++P+ +TF
Sbjct: 429 CGSIERASKAFLEMSTRT-MIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVG 487
Query: 407 VMGACAKMASLEMVTQLHCYIT------KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
V+ AC+ MV+Q Y K A D + ++D++++ G L A
Sbjct: 488 VLSACSHAG---MVSQALNYFEIMQKKYKIKPAMDHY--ECMVDMFVRLGRLEQALNFIK 542
Query: 461 FME-NPDVVSWSSLILGYAQFG 481
M P WS+ I G G
Sbjct: 543 KMNYEPSEFIWSNFIAGCKSHG 564
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 195/424 (45%), Gaps = 67/424 (15%)
Query: 35 PSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
PS Y + ++ ACSSL+SL+LG + H +I+ D + + + ++Y KCG LEDA
Sbjct: 166 PSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKT 225
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F ++ ++NV+SWT+ ++ C+ N ++L+++M+ + P +FT S + C + S+
Sbjct: 226 FSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSL 285
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
LG Q+++ IK + S+L +N+L+ +Y K I++A +F+ + + +W +MIA
Sbjct: 286 ELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGH 345
Query: 213 SKLGYEL------------EALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------ 254
+++ EL EAL F++ L+ +P+ F SV S CS I
Sbjct: 346 AQM-MELTKDNLSACHRGSEALKLFSK-LNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQI 403
Query: 255 ----------------------------------LFNEIDSPDLASWNALIAGVASHSNA 280
F E+ + + +W ++I G + H +
Sbjct: 404 HAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMS 463
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCAC-----IGRLTLYQGMQVHSYIIKMGFDSNVP 335
+A+ +F +M + P+ +T +L AC + + Y + Y IK D
Sbjct: 464 QQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHY-- 521
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
++ M+ + L AL K++ W++ IA C H E F ++L+
Sbjct: 522 --ECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLS- 578
Query: 396 QIKP 399
+KP
Sbjct: 579 -LKP 581
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 127/233 (54%), Gaps = 14/233 (6%)
Query: 31 IRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
+ I+P+ T +S C + SL+LG +V+ + + ++ ++N +L +Y K G + +
Sbjct: 263 VDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVE 322
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQN-----------YQENDAIKLYIQMLQSGVMPGQF 137
A F++M ++V+W AMIAG +Q ++ ++A+KL+ ++ SG+ P F
Sbjct: 323 AHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLF 382
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
T S++ CS + ++ G Q+HA IK+ S +I +LI+MY+K I A F +
Sbjct: 383 TLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEM 442
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
+ + + +W SMI FS+ G +AL F +M G +PN F V SACS+
Sbjct: 443 STRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGV-RPNAVTFVGVLSACSH 494
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 158/543 (29%), Positives = 261/543 (48%), Gaps = 52/543 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+Y +IS L R + D + D+ N +L Y + L DARM FD M
Sbjct: 66 SYNAMISGYLRNAKFSLARDLFDKM----PHKDLFSWNLMLTGYARNRRLRDARMLFDSM 121
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+++VVSW AM++G ++ ++A ++ +M ++ ++ A G + R
Sbjct: 122 PEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKN----SISWNGLLAAYVRSGRLEEAR 177
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+L +S+ LI+ N L+ Y K + + DAR +F I +D+ SW +MI+ +++ G
Sbjct: 178 RL----FESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDG 233
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVAS 276
+A F E + ++ V + AR +F+E+ S+N +IAG A
Sbjct: 234 DLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQ 293
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
+ + LF EM P N+
Sbjct: 294 YKRMDMGRELFEEMP----FP-----------------------------------NIGS 314
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
N +++ Y + L A +F ++ DSVSW +IIA Q+ EE + M
Sbjct: 315 WNIMISGYCQNGDLAQARNLF-DMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDG 373
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
+ TF + ACA +A+LE+ Q+H + +TG V N L+ +Y KCG + A
Sbjct: 374 ESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAY 433
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
+F +++ D+VSW++++ GYA+ G G +AL +F M + GV P+ +T+VGVL+ACSH G
Sbjct: 434 DVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTG 493
Query: 517 LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
L + G + M +YGI P +H +C++DLL RAGC+ EA++ I M + D W +L
Sbjct: 494 LTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGAL 553
Query: 577 LAS 579
L +
Sbjct: 554 LGA 556
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 155/305 (50%), Gaps = 18/305 (5%)
Query: 34 RPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
R +Y +I+ + + + +GR++ + + P++ N +++ Y + G L AR F
Sbjct: 280 REMSYNVMIAGYAQYKRMDMGRELFEEMPF----PNIGSWNIMISGYCQNGDLAQARNLF 335
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
D MPQR+ VSW A+IAG +QN +A+ + ++M + G + TF + AC+ + ++
Sbjct: 336 DMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALE 395
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
LG+Q+H V+++ + + NAL+ MY K I +A +VF G+ KD+ SW +M+A ++
Sbjct: 396 LGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYA 455
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEID-----SPD 263
+ G+ +AL F M+ G +P+E V SACS+ F+ ++ +P+
Sbjct: 456 RHGFGRQALTVFESMITAGV-KPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPN 514
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+ +I + EA +L +R+ PD T +LL A + G Q
Sbjct: 515 SKHYACMIDLLGRAGCLEEAQNL---IRNMPFEPDAATWGALLGASRIHGNMELGEQAAE 571
Query: 324 YIIKM 328
+ KM
Sbjct: 572 MVFKM 576
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 179/416 (43%), Gaps = 73/416 (17%)
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNA 280
ALC F+ M + N I G + +A + AR LF+++ DL SWN ++ G A +
Sbjct: 52 ALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRL 111
Query: 281 NEAMSLFSEMRDRELL---------------------------PDGLTVHSLLCACIGRL 313
+A LF M +++++ + ++ + LL A +
Sbjct: 112 RDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSG 171
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
L + + + + D + CN ++ Y K ++L +A +F ++ D +SWN++I
Sbjct: 172 RLEEARR----LFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVR-DLISWNTMI 226
Query: 374 AACLQHNQAEELFRLFS---------------------------RMLASQIKPDHITFND 406
+ Q + RLF R+ + +++N
Sbjct: 227 SGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNV 286
Query: 407 VMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPD 466
++ A+ ++M +L + + +++G Y + G L AR LF+ M D
Sbjct: 287 MIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISG----YCQNGDLAQARNLFDMMPQRD 342
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY- 525
VSW+++I GYAQ G +EA+ + M+ G S N T L+AC+ + +E G ++
Sbjct: 343 SVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHG 402
Query: 526 RIMENEYGIIPTREHC---SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+++ Y + C + +V + + GC+ EA D + Q DIV W ++LA
Sbjct: 403 QVVRTGY-----EKGCLVGNALVGMYCKCGCIDEAYD-VFQGVQHKDIVSWNTMLA 452
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 113/213 (53%), Gaps = 13/213 (6%)
Query: 6 VSSLCKQNLYNEAL-VAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLS 64
++ + LY EA+ + + ++ ++ ST+ +SAC+ + +L+LG++VH ++ +
Sbjct: 350 IAGYAQNGLYEEAMNMLVEMKRDGESLN--RSTFCCALSACADIAALELGKQVHGQVVRT 407
Query: 65 KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
+ ++ N ++ MY KCG +++A F + +++VSW M+AG +++ A+ ++
Sbjct: 408 GYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVF 467
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNA-----LIA 179
M+ +GV P + T ++ ACS G G + + H + ++G I N+ +I
Sbjct: 468 ESMITAGVKPDEITMVGVLSACSHTGLTDRGTE-YFHSMNKDYG---ITPNSKHYACMID 523
Query: 180 MYTKFDRILDARNVFSGIA-RKDVTSWGSMIAA 211
+ + + +A+N+ + D +WG+++ A
Sbjct: 524 LLGRAGCLEEAQNLIRNMPFEPDAATWGALLGA 556
>gi|15223809|ref|NP_177827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098688|sp|O49287.1|PP127_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial; Flags: Precursor
gi|2829915|gb|AAC00623.1| Hypothetical protein [Arabidopsis thaliana]
gi|332197804|gb|AEE35925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 695
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 174/612 (28%), Positives = 296/612 (48%), Gaps = 86/612 (14%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSK--CQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
Y L+ +CSS L R+ + +LL K V++ NH+L MY + G + AR FD+
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNG-LLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDE 87
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ--FTFGSIIKACSGLGSVC 153
MP RN SW MI G + ++ +++ + +MP + +++ ++ + G +
Sbjct: 88 MPDRNYFSWNTMIEGYMNSGEKGTSLRFF------DMMPERDGYSWNVVVSGFAKAGELS 141
Query: 154 LGRQL----------------HAHVIK--SEHGSHLIAQNALIAMYTKFDRILDA----- 190
+ R+L H +++ +E L + A +L A
Sbjct: 142 VARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELE 201
Query: 191 ---------RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
+ G D S++ ++K G +L + E + +P++
Sbjct: 202 ALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCG-DLRMASYMLEQIR----EPDDHSL 256
Query: 242 GSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
++ S +N R+ LF+ + + WN++I+G +++ EA+ LF+EMR+ E
Sbjct: 257 SALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN-ETR 315
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC--------- 347
D T+ +++ ACIG L G Q+H + K G ++ V + +L MY+KC
Sbjct: 316 EDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 348 --------SVLCNALL--------------VFKELGKNADSVSWNSIIAACLQHNQAEEL 385
++L N+++ VF+ + +N +SWNS+ Q+ E
Sbjct: 376 FSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERI-ENKSLISWNSMTNGFSQNGCTVET 434
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
F +M + D ++ + V+ ACA ++SLE+ Q+ T GL D V + L+D+
Sbjct: 435 LEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDL 494
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y KCG + R++F+ M D V W+S+I GYA G G EA+ LF +M G+ P +T
Sbjct: 495 YCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITF 554
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
+ VLTAC++ GLVEEG L+ M+ ++G +P +EH SC+VDLLARAG V EA + + +M
Sbjct: 555 MVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMP 614
Query: 566 CDADIVVWKSLL 577
D D +W S+L
Sbjct: 615 FDVDGSMWSSIL 626
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/525 (24%), Positives = 239/525 (45%), Gaps = 70/525 (13%)
Query: 118 NDAIKLYIQ--MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH-GSHLIAQ 174
N + + Y+ LQ+ + + + ++++CS L RQ + ++K S +I
Sbjct: 6 NSSYRFYLSSSFLQAMEVDCRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVA 65
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
N L+ MY++ ++ ARN+F + ++ SW +MI + G + +L F+ M Y
Sbjct: 66 NHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGY 125
Query: 235 QPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
N + G + + AR LFN + D+ + N+L+ G + A EA+ LF E+
Sbjct: 126 SWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---N 182
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
D +T+ ++L AC L G Q+H+ I+ G + + + ++++ +YAKC L A
Sbjct: 183 FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMAS 242
Query: 355 LVFKELGKNADS------------------------------VSWNSIIAACLQHNQAEE 384
+ +++ + D + WNS+I+ + +N E
Sbjct: 243 YMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKME 302
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
LF+ M ++ + D T V+ AC + LE Q+HC+ K GL D+ V + L+D
Sbjct: 303 ALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLD 361
Query: 445 IYIKCGS-------------------------------LGSARKLFNFMENPDVVSWSSL 473
+Y KCGS + A+++F +EN ++SW+S+
Sbjct: 362 MYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSM 421
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
G++Q GC E L+ F +M L + + V+L V++AC+ + +E G ++ G
Sbjct: 422 TNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVF-ARATIVG 480
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ + S ++DL + G V + M +D V W S+++
Sbjct: 481 LDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMV-KSDEVPWNSMIS 524
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 188/446 (42%), Gaps = 105/446 (23%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE--------- 87
T ++ AC+ L +L+ G+++H IL+ + D + + ++N+Y KCG L
Sbjct: 189 TLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQI 248
Query: 88 ----------------------DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
++R FD+ R V+ W +MI+G N + +A+ L+
Sbjct: 249 REPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFN 308
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK-----------------SEHG 168
+M ++ T ++I AC GLG + G+Q+H H K S+ G
Sbjct: 309 EM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCG 367
Query: 169 SHL--------------IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
S + I N++I +Y RI DA+ VF I K + SW SM FS+
Sbjct: 368 SPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQ 427
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARILFNEIDSPDL 264
G +E L +F++M H +E SV SAC++ FAR +DS +
Sbjct: 428 NGCTVETLEYFHQM-HKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQV 486
Query: 265 AS------------------------------WNALIAGVASHSNANEAMSLFSEMRDRE 294
S WN++I+G A++ EA+ LF +M
Sbjct: 487 VSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAG 546
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQV-HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ P +T +L AC + +G ++ S + GF + + ++ + A+ + A
Sbjct: 547 IRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEA 606
Query: 354 LLVFKELGKNADSVSWNSIIAACLQH 379
+ + +E+ + D W+SI+ C+ +
Sbjct: 607 INLVEEMPFDVDGSMWSSILRGCVAN 632
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 166/373 (44%), Gaps = 47/373 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI- 61
N +S N+ EALV ++ +N T R T A +I+AC L L+ G+++H H
Sbjct: 288 NSMISGYIANNMKMEALVLFNEMRNET--REDSRTLAAVINACIGLGFLETGKQMHCHAC 345
Query: 62 ----------------LLSKCQP--------------DVVLQNHILNMYGKCGSLEDARM 91
+ SKC D +L N ++ +Y CG ++DA+
Sbjct: 346 KFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKR 405
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
F+++ ++++SW +M G SQN + ++ + QM + + + + S+I AC+ + S
Sbjct: 406 VFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISS 465
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ LG Q+ A S + ++LI +Y K + R VF + + D W SMI+
Sbjct: 466 LELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISG 525
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARILFNEID-----S 261
++ G EA+ F +M G +P + F V +AC+ R LF +
Sbjct: 526 YATNGQGFEAIDLFKKMSVAGI-RPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFV 584
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
PD ++ ++ +A EA++L EM DG S+L C+ G +
Sbjct: 585 PDKEHFSCMVDLLARAGYVEEAINLVEEM---PFDVDGSMWSSILRGCVANGYKAMGKKA 641
Query: 322 HSYIIKMGFDSNV 334
II++ +++V
Sbjct: 642 AEKIIELEPENSV 654
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/480 (30%), Positives = 251/480 (52%), Gaps = 43/480 (8%)
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGS--HLIAQNALIAMYTKFDRILDARNVFSGIAR 199
++K + ++ G+ +HAH+I + + +++ N+LI +Y K D+I+ AR +F G+ +
Sbjct: 31 LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRK 90
Query: 200 KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL---- 255
++V SWG+++A + G LE L F M+ +PNE+IF ++ S+CS+ +++
Sbjct: 91 RNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQ 150
Query: 256 ------------------------------------FNEIDSPDLASWNALIAGVASHSN 279
+ E+ D+ S+N +I G+ +
Sbjct: 151 CHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGY 210
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA 339
+EA+ + M D ++ D +T + C L G+QVH + + G + + V +A
Sbjct: 211 PSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSA 270
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
I+ MY KC + NA VF L + + VSW +I+AA Q+ EE F M + P
Sbjct: 271 IIDMYGKCGNILNARKVFNRL-QTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLP 329
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
+ TF ++ +CA +++L LH I K+G + V N L+++Y K GS+ +A K+F
Sbjct: 330 NEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVF 389
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
M D ++WS++I G + G G EAL +F M + P+ VT VGVL+AC+H+G V+
Sbjct: 390 LEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQ 449
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
EG + + + GI P EH +C+V LL +AG + EAE+F+ D+V W++LL++
Sbjct: 450 EGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSA 509
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/504 (28%), Positives = 247/504 (49%), Gaps = 56/504 (11%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSK--CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
L+ + ++L+ G+ +H H++++ + ++V N ++N+Y KC + AR+ FD M +
Sbjct: 31 LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRK 90
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGRQ 157
RNVVSW A++AG N + ++L+ M+ M P ++ F +II +CS G V G Q
Sbjct: 91 RNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQ 150
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
H + +KS H +NALI MY++ + A +V+ + DV S+ +I + GY
Sbjct: 151 CHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGY 210
Query: 218 ELEAL-------------------------CHFNE----------MLHHGAYQPNEFIFG 242
EAL H + M GA + + F+
Sbjct: 211 PSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGA-EYDSFVSS 269
Query: 243 SV---FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
++ + C N AR +FN + + ++ SW A++A + + EA++ F EM LLP
Sbjct: 270 AIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLP 329
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
+ T LL +C G L G +H+ I K GF+ ++ V NA++ MY+K + A VF
Sbjct: 330 NEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVF 389
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
E+ DS++W+++I H E +F MLA++ P ++TF V+ ACA + S+
Sbjct: 390 LEM-ICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSV 448
Query: 418 -EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP----DVVSWSS 472
E L+ + +TG+ V ++ + K G L A NFM++ DVV+W +
Sbjct: 449 QEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAE---NFMKSTPVKWDVVAWRT 505
Query: 473 LILG---YAQFGCGDEALKLFTRM 493
L+ + +G G + +L +M
Sbjct: 506 LLSACHVHQNYGLGKKVAELVLQM 529
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 186/385 (48%), Gaps = 29/385 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY CS L+ L+LG +VH + + + D + + I++MYGKCG++ +AR F+++
Sbjct: 232 TYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRL 291
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+NVVSWTA++A SQN +A+ + +M G++P ++TF ++ +C+G+ ++ G+
Sbjct: 292 QTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGK 351
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
LH + KS H+I NALI MY+K I A VF + +D +W +MI S G
Sbjct: 352 LLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHG 411
Query: 217 YELEALCHFNEMLHHGAYQ-PNEFIFGSVFSACSNFARI-----LFNEI-----DSPDLA 265
EAL F EML A + P+ F V SAC++ + N++ P +
Sbjct: 412 LGREALVVFQEML--AAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVE 469
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
+ ++ + +EA + M+ + D + +LL AC G +V +
Sbjct: 470 HYTCIVGLLCKAGRLDEAENF---MKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELV 526
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG----KNADSVSW----NSI---IA 374
++M +V + MYAK + + K + K SW NSI ++
Sbjct: 527 LQMD-PGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVS 585
Query: 375 ACLQHNQAEELFRLFSRMLASQIKP 399
H ++ +++ +L + I+P
Sbjct: 586 EGKTHPESNQIYEKVQELL-TMIRP 609
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 176/391 (45%), Gaps = 44/391 (11%)
Query: 33 IRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP+ Y A +IS+CS + G + H + L S ++N ++ MY + ++ A
Sbjct: 125 MRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAM 184
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
+ ++P +V S+ +I G +N ++A+++ +M+ ++ T+ + CS L
Sbjct: 185 SVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLK 244
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ LG Q+H + ++ +A+I MY K IL+AR VF+ + K+V SW +++A
Sbjct: 245 DLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILA 304
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------- 251
A+S+ G EAL F EM G PNE+ F + ++C+
Sbjct: 305 AYSQNGCFEEALNFFPEMEVDGLL-PNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFE 363
Query: 252 ---------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
A +F E+ D +W+A+I G++ H EA+ +F EM
Sbjct: 364 DHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEM 423
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSV 349
+ P +T +L AC ++ +G + ++K G + V I+ + K
Sbjct: 424 LAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGR 483
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHN 380
L A K D V+W ++++AC H
Sbjct: 484 LDEAENFMKSTPVKWDVVAWRTLLSACHVHQ 514
>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 169/598 (28%), Positives = 302/598 (50%), Gaps = 69/598 (11%)
Query: 2 SNDYVSSLCKQNLYNEALVAYD-FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDH 60
++ +++ LCK +A+ D +Q +N++ P+TY L+ +C S +LGRK+H
Sbjct: 53 TDAHLNHLCKNGRLADAIACLDAIAQGGSNVK--PNTYMQLLQSCIDQGSAELGRKLHAR 110
Query: 61 I-LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
I LL + P ++ +++MY KCGSL +AR F +M +RN+ +W+AMI S+ +
Sbjct: 111 IGLLEEMNP--FVETKLVSMYAKCGSLGEARKVFGEMRERNLYAWSAMIGAYSREQMWRE 168
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
++ + M++ G++P +F I++AC G G+ +H+ VI+ ++ N+++A
Sbjct: 169 VVQHFFFMMEDGIVPDEFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSNSILA 228
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
+Y K R+ AR F + +D SW S+I + + G ELE E + +P
Sbjct: 229 VYAKCGRLSCARRFFENMDYRDRVSWNSIITGYCQKG-ELEKSHQLFEKMQEEGIEPGLV 287
Query: 240 IFGSVFSACSNFARI-----LFNEIDS----PDLASWNALIAGVASHSNANEAMSLFSEM 290
+ + ++ S + L +++S PD+ +W ++I+G A ++ ++A+ LF EM
Sbjct: 288 TWNILINSYSQSGKCDDAMELMKKMESFRIVPDVFTWTSMISGFAQNNRRSQALELFREM 347
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ P+G+TV S + AC L +GM++HS +K+G ++ V N+++ MY+K L
Sbjct: 348 LLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGEL 407
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
+A VF + K D +WNS+I Q + + LF +M S + P+ +T+N ++
Sbjct: 408 EDARRVFDMILKK-DVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISG 466
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP----- 465
YI+ G A LF+ ME
Sbjct: 467 -----------------------------------YIQNGDEDQAMDLFHRMEKDGLIKR 491
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE----- 520
D SW+SLI GY Q G ++AL +F +M+S + PN VT++ +L AC+++ ++
Sbjct: 492 DTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNSVTMLSILPACANLVAAKKVKEIH 551
Query: 521 GLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G L R + +E + +C++D A++G + A+ I Q DI+ W SL+A
Sbjct: 552 GCILRRNLGSELSV------ANCLIDTYAKSGNIVYAQT-IFQGISSKDIISWNSLIA 602
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 154/587 (26%), Positives = 262/587 (44%), Gaps = 119/587 (20%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++ AC + + G+ +H ++ ++ + N IL +Y KCG L AR F+ M R+
Sbjct: 191 ILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFENMDYRD 250
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
VSW ++I G Q + + +L+ +M + G+ PG
Sbjct: 251 RVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPG------------------------- 285
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR----KDVTSWGSMIAAFSKLG 216
L+ N LI Y++ + DA + + DV +W SMI+ F++
Sbjct: 286 ----------LVTWNILINSYSQSGKCDDAMELMKKMESFRIVPDVFTWTSMISGFAQNN 335
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+AL F EML G +PN S SAC++
Sbjct: 336 RRSQALELFREMLLAGI-EPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVG 394
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR +F+ I D+ +WN++I G +A LF +M + ++
Sbjct: 395 NSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVP 454
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P NV NA+++ Y + A+ +
Sbjct: 455 P-----------------------------------NVVTWNAMISGYIQNGDEDQAMDL 479
Query: 357 FKELGKNA----DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
F + K+ D+ SWNS+IA LQ+ + +F +M + I+P+ +T ++ ACA
Sbjct: 480 FHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNSVTMLSILPACA 539
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+ + + V ++H I + L ++ V N L+D Y K G++ A+ +F + + D++SW+S
Sbjct: 540 NLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQGISSKDIISWNS 599
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
LI GY GC D AL LF +M +GV P+ T + ++ A S G+V++G ++ M +Y
Sbjct: 600 LIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGMVDKGKQVFSSMMEDY 659
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
I+P EH S ++DLL R+G + EA +FI MA + D +W +LL +
Sbjct: 660 QILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEPDSCIWAALLTA 706
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IRP+ T ++ AC++L + + +++H IL ++ + N +++ Y K G++ A+
Sbjct: 524 IRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQ 583
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F + ++++SW ++IAG + + A+ L+ QM + GV P + TF SII A S G
Sbjct: 584 TIFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSG 643
Query: 151 SVCLGRQLHAHVIKS-------EHGSHLI 172
V G+Q+ + +++ EH S +I
Sbjct: 644 MVDKGKQVFSSMMEDYQILPGLEHHSAMI 672
>gi|359489798|ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 804
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/492 (31%), Positives = 238/492 (48%), Gaps = 43/492 (8%)
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
ML + P T S+I+A SGLG + R + VIK S + ALI Y+ +D
Sbjct: 1 MLMTEQRPNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYSDYDM 60
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+ +F+ KD+ W +M++A K G EA F M + G +PN S+
Sbjct: 61 GI-VWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGV-EPNHVSIVSILP 118
Query: 247 ACSNFARILF----------------------------------------NEIDSPDLAS 266
AC+N +LF ++I DL S
Sbjct: 119 ACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLIS 178
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
W +I G + EA FS M+ D V L+ A I G+ H +++
Sbjct: 179 WTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLL 238
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
K G + V + A+L MYAK L +A++VF +L K D +SW+++I+
Sbjct: 239 KNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKK-DYISWSAMISVHAHSRHPYNAL 297
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
F +M ++ +P+ ITF ++ AC+ + + E+ + + TK G + F+ + L+D+Y
Sbjct: 298 ETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLY 357
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
K G + R +FN + D+V WSS+I GY GCGDEAL+ F+ M + GV PN V +
Sbjct: 358 CKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFI 417
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
VL+ACSH GL EG + ME +YGIIP H +C+VDL++R G + A F+N+M
Sbjct: 418 SVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPM 477
Query: 567 DADIVVWKSLLA 578
+ D +W +LLA
Sbjct: 478 EPDKRIWGALLA 489
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 199/441 (45%), Gaps = 51/441 (11%)
Query: 84 GSLEDARMG-----FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
G D MG F++ P +++V W+AM++ C ++ Q +A +++ M GV P +
Sbjct: 53 GFYSDYDMGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVS 112
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
SI+ AC+ +G++ G+++H IK N+L+ MY K + VF I
Sbjct: 113 IVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQIL 172
Query: 199 RKDVTSWGSMI-------------AAFSKLGYE----------------LEALCHFNEML 229
KD+ SW ++I AFS++ + ++A H +
Sbjct: 173 EKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIA 232
Query: 230 HHGAYQPNEFI-FGSVFSACSNF---------ARILFNEIDSPDLASWNALIAGVASHSN 279
HG N + F S+ +A A I+F++++ D SW+A+I+ A +
Sbjct: 233 FHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRH 292
Query: 280 ANEAMSLFSEMRDRELLPDGLTVHSLLCAC--IGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
A+ F +M+ + P+ +T SLL AC IG L + +Q H+ K G+ SN +
Sbjct: 293 PYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHA--TKAGYLSNAFLS 350
Query: 338 NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
+A++ +Y K + +F E+ D V W+S+I + +E FS MLA +
Sbjct: 351 SALIDLYCKFGRINQGRAIFNEI-PTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGV 409
Query: 398 KPDHITFNDVMGACAKMA-SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
KP+ + F V+ AC+ E + K G+ + ++D+ + G++ A
Sbjct: 410 KPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGAL 469
Query: 457 KLFNFME-NPDVVSWSSLILG 476
+ N M PD W +L+ G
Sbjct: 470 QFVNKMPMEPDKRIWGALLAG 490
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 138/279 (49%), Gaps = 14/279 (5%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
LI A + G H +L + V + +L MY K G LE A + FD++ +++
Sbjct: 217 LIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKD 276
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
+SW+AMI+ + + +A++ + QM + P + TF S+++ACS +G+ LG + A
Sbjct: 277 YISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQA 336
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
H K+ + S+ +ALI +Y KF RI R +F+ I KD+ W SMI + G E
Sbjct: 337 HATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDE 396
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSN----------FARILFNEIDSPDLASWNAL 270
AL F+ ML G +PNE +F SV SACS+ F+ + P L + +
Sbjct: 397 ALETFSNMLACGV-KPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYACM 455
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+ ++ N A+ ++M + PD +LL C
Sbjct: 456 VDLISRRGNIEGALQFVNKM---PMEPDKRIWGALLAGC 491
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 184/431 (42%), Gaps = 47/431 (10%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILL 63
VS+ K Y EA + Q + + P+ + ++ AC+++ +L G+++H +
Sbjct: 82 VSACVKSGQYGEAFEIFRAMQYDG---VEPNHVSIVSILPACANVGALLFGKEIHGFSIK 138
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
P + N +++MY KC + + + + FD++ +++++SWT +I GC +N +A K
Sbjct: 139 KMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKA 198
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ +M S + +I A G H ++K+ + + AL+ MY K
Sbjct: 199 FSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAK 258
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
F + A VF + +KD SW +MI+ + + AL F +M +PNE F S
Sbjct: 259 FGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQM-QSTDERPNEITFVS 317
Query: 244 VFSACS----------------------------------------NFARILFNEIDSPD 263
+ ACS N R +FNEI + D
Sbjct: 318 LLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKD 377
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
L W+++I G + +EA+ FS M + P+ + S+L AC ++G S
Sbjct: 378 LVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFS 437
Query: 324 YI-IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ K G +P ++ + ++ + AL ++ D W +++A C + +
Sbjct: 438 SMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGS 497
Query: 383 EELFRLFSRML 393
E+ L + L
Sbjct: 498 IEIAELVAERL 508
>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/503 (30%), Positives = 247/503 (49%), Gaps = 42/503 (8%)
Query: 118 NDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
+ ++L+ ++ G F S+IKA S G QLH +K+ S + N++
Sbjct: 33 HQTLQLFSELHLCGHSSISFFLPSVIKASSSAQCHTFGTQLHCLALKTGSHSETVVSNSI 92
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
I MY KF + AR VF + +D +W S+I + GY EAL N++ G P
Sbjct: 93 ITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYLEEALEALNDVYLLGLV-PK 151
Query: 238 EFIFGSVFSAC-----------------------------------------SNFARILF 256
+ SV S C S A +F
Sbjct: 152 PELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFLSTALVDFYFRCGDSLMALRVF 211
Query: 257 NEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLY 316
+ ++ ++ SW +I+G +H + +EA + F M+ + P+ +T +LL AC +
Sbjct: 212 DGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGVCPNRVTSIALLSACAEPGFVK 271
Query: 317 QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
G ++H Y + GF+S +A++ MY +C + + E D V W+SII +
Sbjct: 272 HGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAELIFEGSSFRDVVLWSSIIGSF 331
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV 436
+ + + +LF++M +I+P+++T V+ AC ++SL+ LH YI K G F +
Sbjct: 332 SRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSI 391
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
V N L+++Y KCG L +RK+F M N D V+WSSLI Y GCG++AL++F M
Sbjct: 392 SVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWSSLISAYGLHGCGEQALQIFYEMNER 451
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
GV P+ +T + VL+AC+H GLV EG +++ + + I T EH +C+VDLL R+G +
Sbjct: 452 GVKPDAITFLAVLSACNHAGLVAEGQRIFKQVRADCEIPLTIEHYACLVDLLGRSGKLEY 511
Query: 557 AEDFINQMACDADIVVWKSLLAS 579
A + M +W SL+++
Sbjct: 512 ALEIRRTMPMKPSARIWSSLVSA 534
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 220/483 (45%), Gaps = 56/483 (11%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
+I A SS + G ++H L + + V+ N I+ MY K + AR FD MP R+
Sbjct: 57 VIKASSSAQCHTFGTQLHCLALKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRD 116
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
++W ++I G N +A++ + G++P S++ C +GRQ+HA
Sbjct: 117 PITWNSLINGYLHNGYLEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHA 176
Query: 161 HVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI---------- 209
V+ +E G + AL+ Y + L A VF G+ K+V SW +MI
Sbjct: 177 LVVVNERIGQSMFLSTALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYD 236
Query: 210 ---AAFSKLGYE-----------LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---- 251
A F + E L + C + HG + + + F F +C +F
Sbjct: 237 EAFACFRAMQAEGVCPNRVTSIALLSACAEPGFVKHGK-EIHGYAFRHGFESCPSFSSAL 295
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
A ++F D+ W+++I + ++ +A+ LF++MR E+ P+
Sbjct: 296 VNMYCQCGEPMHLAELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPN 355
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+T+ +++ AC +L G +H YI K GF ++ V NA++ MYAKC L + +F
Sbjct: 356 YVTLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFL 415
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC------A 412
E+ N D+V+W+S+I+A H E+ ++F M +KPD ITF V+ AC A
Sbjct: 416 EM-PNRDNVTWSSLISAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVA 474
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWS 471
+ + + C I T + L+D+ + G L A ++ M P WS
Sbjct: 475 EGQRIFKQVRADCEIPLTIEHYAC-----LVDLLGRSGKLEYALEIRRTMPMKPSARIWS 529
Query: 472 SLI 474
SL+
Sbjct: 530 SLV 532
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 186/410 (45%), Gaps = 55/410 (13%)
Query: 34 RPSTYAGLISACSSLRSLQLGRKVHDHILLS-KCQPDVVLQNHILNMYGKCGSLEDARMG 92
+P A ++S C ++GR++H ++++ + + L +++ Y +CG A
Sbjct: 151 KPELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFLSTALVDFYFRCGDSLMALRV 210
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FD M +NVVSWT MI+GC + ++A + M GV P + T +++ AC+ G V
Sbjct: 211 FDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGVCPNRVTSIALLSACAEPGFV 270
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD-ARNVFSGIARKDVTSWGSMIAA 211
G+++H + + S +AL+ MY + + A +F G + +DV W S+I +
Sbjct: 271 KHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAELIFEGSSFRDVVLWSSIIGS 330
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------------- 252
FS+ G +AL FN+M +PN +V SAC+N +
Sbjct: 331 FSRRGDSFKALKLFNKMRTE-EIEPNYVTLLAVISACTNLSSLKHGCGLHGYIFKFGFCF 389
Query: 253 ---------------------RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
R +F E+ + D +W++LI+ H +A+ +F EM
Sbjct: 390 SISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWSSLISAYGLHGCGEQALQIFYEMN 449
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC----NAILTMYAKC 347
+R + PD +T ++L AC + +G ++ + D +P+ ++ + +
Sbjct: 450 ERGVKPDAITFLAVLSACNHAGLVAEGQRIFKQVRA---DCEIPLTIEHYACLVDLLGRS 506
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
L AL + + + + W+S+++AC H + + + MLA Q+
Sbjct: 507 GKLEYALEIRRTMPMKPSARIWSSLVSACKLHGRLD-----IAEMLAPQL 551
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 155/336 (46%), Gaps = 16/336 (4%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
F R L + +P +S + I S ++ + LFSE+ L ++ L + I
Sbjct: 4 FTRRLLTTV-APTCSSPSNQIKSFLSKGLYHQTLQLFSELH----LCGHSSISFFLPSVI 58
Query: 311 GRLTLYQ----GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
+ Q G Q+H +K G S V N+I+TMY K S + +A VF + + D
Sbjct: 59 KASSSAQCHTFGTQLHCLALKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTM-PHRDP 117
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC- 425
++WNS+I L + EE + + + P V+ C + ++ Q+H
Sbjct: 118 ITWNSLINGYLHNGYLEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHAL 177
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
+ + +F+ L+D Y +CG A ++F+ ME +VVSW+++I G DE
Sbjct: 178 VVVNERIGQSMFLSTALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDE 237
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSC 543
A F M++ GV PN VT + +L+AC+ G V+ G +H Y +G S
Sbjct: 238 AFACFRAMQAEGVCPNRVTSIALLSACAEPGFVKHGKEIHGYAF---RHGFESCPSFSSA 294
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+V++ + G + I + + D+V+W S++ S
Sbjct: 295 LVNMYCQCGEPMHLAELIFEGSSFRDVVLWSSIIGS 330
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 118/237 (49%), Gaps = 3/237 (1%)
Query: 15 YNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQN 74
Y+EA + Q R ++ A L+SAC+ ++ G+++H + + +
Sbjct: 235 YDEAFACFRAMQAEGVCPNRVTSIA-LLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSS 293
Query: 75 HILNMYGKCGS-LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
++NMY +CG + A + F+ R+VV W+++I S+ A+KL+ +M +
Sbjct: 294 ALVNMYCQCGEPMHLAELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIE 353
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P T ++I AC+ L S+ G LH ++ K + NALI MY K + +R +
Sbjct: 354 PNYVTLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKM 413
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
F + +D +W S+I+A+ G +AL F EM G +P+ F +V SAC++
Sbjct: 414 FLEMPNRDNVTWSSLISAYGLHGCGEQALQIFYEMNERGV-KPDAITFLAVLSACNH 469
>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/487 (32%), Positives = 249/487 (51%), Gaps = 55/487 (11%)
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM--YTKFDRILDARNVFSGIA 198
S+++ C + + ++LH +I + +I + L+ Y+ + A++VF+ I
Sbjct: 10 SLLEKCKTMAEL---KRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQID 66
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------- 249
R + W SMI +S EAL + EM G Y P+ F F V ACS
Sbjct: 67 RPSLYIWNSMIKGYSISESPDEALTMYREMRQKG-YAPDHFTFPFVLKACSLVNGYNLGQ 125
Query: 250 -------------------------------NFARILFNEIDSPDLASWNALIAGVASHS 278
A +F++I ++ +W +LIAG S+
Sbjct: 126 CVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISND 185
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS------ 332
+EA+ ++ +M + P+ +T+ ++L AC L G VH +MG D
Sbjct: 186 CPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSN 245
Query: 333 -NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
NV + AI+ MYAKC L A +F ++ + + V+WNS+I A Q+ QA E LFS
Sbjct: 246 FNVILATAIVDMYAKCGSLKTARDLFNKM-PHRNLVAWNSMIGAYNQYGQANEALDLFSD 304
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M + PD TF V+GACA + +L LH Y++KT L D + L+D+Y K G
Sbjct: 305 MRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGD 364
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS-LGVSPNLVTLVGVLT 510
A+++F+ ++ DV +W+SLI+G A G G+EAL F +M+ + P+ +T +GVL+
Sbjct: 365 AERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLS 424
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSHVG VE+G + + M+N +GI PT +H C+VDLL+RAG + EAE + +M + +
Sbjct: 425 ACSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNT 484
Query: 571 VVWKSLL 577
+W +LL
Sbjct: 485 AIWSALL 491
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 217/489 (44%), Gaps = 59/489 (12%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNM--YGKCGSLEDARMGFDKMPQ 98
L+ C ++ L +++H ++ + DV+ + +++ Y G+L A+ F+++ +
Sbjct: 11 LLEKCKTMAEL---KRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQIDR 67
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
++ W +MI G S + ++A+ +Y +M Q G P FTF ++KACS + LG+ +
Sbjct: 68 PSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCV 127
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H ++K+ + A AL+ MY + A VF I + +V +W S+IA
Sbjct: 128 HNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISNDCP 187
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSAC---------------------------SNF 251
EA+ + +M + PNE +V AC SNF
Sbjct: 188 SEAVRVYKDM-ELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNF 246
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
AR LFN++ +L +WN++I + ANEA+ LFS+MR
Sbjct: 247 NVILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMR 306
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
PD T ++ AC L G +H+Y+ K + + A++ MYAK
Sbjct: 307 IAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAE 366
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA-SQIKPDHITFNDVMGA 410
A VF EL K D +W S+I H EE F +M + + PD IT+ V+ A
Sbjct: 367 RAQQVFSELQKK-DVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSA 425
Query: 411 CAKMASLEMVTQLHCYITKT--GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDV 467
C+ + +E + H K G+ ++D+ + G LG A +L M P+
Sbjct: 426 CSHVGKVE-DGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNT 484
Query: 468 VSWSSLILG 476
WS+L+ G
Sbjct: 485 AIWSALLNG 493
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 123/225 (54%), Gaps = 7/225 (3%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQP-------DVVLQNHILNMYGKCGSLEDA 89
T ++ AC+ R L GR VHD P +V+L I++MY KCGSL+ A
Sbjct: 208 TMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFNVILATAIVDMYAKCGSLKTA 267
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R F+KMP RN+V+W +MI +Q Q N+A+ L+ M +G P + TF +I AC+ L
Sbjct: 268 RDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMRIAGFDPDKATFLCVIGACAHL 327
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G++ G+ LHA+V K+ AL+ MY K A+ VFS + +KDVT+W S+I
Sbjct: 328 GALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAERAQQVFSELQKKDVTAWTSLI 387
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI 254
+ G+ EAL F +M A P+E + V SACS+ ++
Sbjct: 388 IGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACSHVGKV 432
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 158/321 (49%), Gaps = 49/321 (15%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ ACS + LG+ VH+ I+ + + DV +L MY CG +E A FD +
Sbjct: 107 TFPFVLKACSLVNGYNLGQCVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDI 166
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+ NVV+WT++IAGC N ++A+++Y M V P + T +++ AC+ + GR
Sbjct: 167 PKWNVVAWTSLIAGCISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGR 226
Query: 157 QLHAHV-------IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
+H +S ++I A++ MY K + AR++F+ + +++ +W SMI
Sbjct: 227 WVHDRTGQMGLDPFQSNSNFNVILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMI 286
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------ 251
A+++ G EAL F++M G + P++ F V AC++
Sbjct: 287 GAYNQYGQANEALDLFSDMRIAG-FDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNL 345
Query: 252 ----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
A+ +F+E+ D+ +W +LI G+A H + EA++ F +
Sbjct: 346 TDDTAIGTALVDMYAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKK 405
Query: 290 MR-DRELLPDGLTVHSLLCAC 309
M+ D L+PD +T +L AC
Sbjct: 406 MQEDTALIPDEITYIGVLSAC 426
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 133/281 (47%), Gaps = 15/281 (5%)
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI-LTMYAKCSVLCNALLVFKELGKNAD 365
C + L G+ + + +I+ +P+ + Y+ L A VF ++ + +
Sbjct: 15 CKTMAELKRLHGLMITTSVIQ----DVIPLSRLVDFCAYSDSGNLNYAKSVFNQIDRPSL 70
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
+ WNS+I +E ++ M PDH TF V+ AC+ + + +H
Sbjct: 71 YI-WNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCVHN 129
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
I KTG DV+ L+ +Y CG + +A K+F+ + +VV+W+SLI G C E
Sbjct: 130 CIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISNDCPSE 189
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH----- 540
A++++ M V+PN +T+V VL AC+ + G ++ + G+ P + +
Sbjct: 190 AVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHD-RTGQMGLDPFQSNSNFNV 248
Query: 541 --CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ +VD+ A+ G + A D N+M ++V W S++ +
Sbjct: 249 ILATAIVDMYAKCGSLKTARDLFNKMP-HRNLVAWNSMIGA 288
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 104/203 (51%), Gaps = 7/203 (3%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRP--STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
N Y +A A D + P +T+ +I AC+ L +L G+ +H ++ + D
Sbjct: 290 NQYGQANEALDLFSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDT 349
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ- 129
+ +++MY K G E A+ F ++ +++V +WT++I G + + +A+ + +M +
Sbjct: 350 AIGTALVDMYAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQED 409
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMYTKFDRI 187
+ ++P + T+ ++ ACS +G V G+ H +K+ HG Q+ ++ + ++ R+
Sbjct: 410 TALIPDEITYIGVLSACSHVGKVEDGKN-HFISMKNVHGIEPTTQHYGCMVDLLSRAGRL 468
Query: 188 LDARNVFSGIARKDVTS-WGSMI 209
+A + + + T+ W +++
Sbjct: 469 GEAERLVEKMPVEPNTAIWSALL 491
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 170/571 (29%), Positives = 280/571 (49%), Gaps = 51/571 (8%)
Query: 53 LGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCS 112
L +++H +++S + ++N+Y G + +R FD++ +++V +W +MI+
Sbjct: 91 LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYV 150
Query: 113 QNYQENDAIKLYIQMLQSGVMPGQF-TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL 171
+N +AI + Q+L F TF ++KAC L GR++H V K +
Sbjct: 151 RNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQWDV 207
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH 231
+LI MY++F + AR++F + +D+ SW +MI+ + G +AL +EM
Sbjct: 208 FVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 267
Query: 232 GAYQPNEFIFGSVFSACSNFARI------------------------------------- 254
G + S+ C+ I
Sbjct: 268 GI-NMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGD 326
Query: 255 ---LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
+F ++ D+ SWN++IA + + A F +M+ L PD LT+ SL
Sbjct: 327 AQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQ 386
Query: 312 RLTLYQGMQVHSYIIKMGF-DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
VH +I++ G+ V + NA++ MYAK V+ +A VF L D VSWN
Sbjct: 387 SRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFN-LIPVKDVVSWN 445
Query: 371 SIIAACLQHNQAEELFRLFSRMLAS--QIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
++I+ Q+ A E ++ RM+ +IK + T+ ++ A A + +L+ ++H ++
Sbjct: 446 TLISGYTQNGLASEAIEVY-RMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLI 504
Query: 429 KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
KT L DVFV L+D+Y KCG L A LF + V W+++I + G G++ALK
Sbjct: 505 KTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALK 564
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLL 548
LF M+ GV P+ VT + +L+ACSH GLV+EG + +M+ EYGI P+ +H C+VDLL
Sbjct: 565 LFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQ-EYGIKPSLKHYGCMVDLL 623
Query: 549 ARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
RAG + A DFI M D +W +LL +
Sbjct: 624 GRAGFLEMAYDFIKDMPLHPDASIWGALLGA 654
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 140/515 (27%), Positives = 237/515 (46%), Gaps = 48/515 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S+ + + EA+ + T + T+ ++ AC +L GRK+H +
Sbjct: 143 NSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVF 199
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
Q DV + +++MY + G + AR FD MP R++ SW AMI+G QN A+
Sbjct: 200 KLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALD 259
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ +M G+ T SI+ C+ LG + +H +VIK L NALI MY
Sbjct: 260 VLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYA 319
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
KF + DA+ VF + +DV SW S+IAA+ + + A F +M +G +P+
Sbjct: 320 KFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNG-LEPDLLTLV 378
Query: 243 SVFSACSN---------------------------------FARI--------LFNEIDS 261
S+ S + +A++ +FN I
Sbjct: 379 SLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPV 438
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRD-RELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D+ SWN LI+G + A+EA+ ++ M + RE+ + T S+L A L QGM+
Sbjct: 439 KDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMR 498
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+H ++IK +V V ++ +Y KC L +A+ +F ++ + + SV WN+II+ H
Sbjct: 499 IHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRES-SVPWNAIISCHGIHG 557
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
E+ +LF M +KPDH+TF ++ AC+ ++ + + G+ +
Sbjct: 558 HGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYG 617
Query: 441 GLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + G L A M +PD W +L+
Sbjct: 618 CMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALL 652
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 167/394 (42%), Gaps = 41/394 (10%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I + T A ++ C+ L + +H +++ + ++ + N ++NMY K G+L DA+
Sbjct: 269 INMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQ 328
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F +M R+VVSW ++IA QN A + +M +G+ P T S+ +
Sbjct: 329 KVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSR 388
Query: 151 SVCLGRQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
R +H +++ ++ NA++ MY K I A VF+ I KDV SW ++I
Sbjct: 389 DYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLI 448
Query: 210 AAFSKLGYELEALCHFNEM--------------------LHHGAYQPNEFIFG------- 242
+ +++ G EA+ + M H GA Q I G
Sbjct: 449 SGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNL 508
Query: 243 -----------SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
++ C A LF ++ WNA+I+ H + +A+ LF E
Sbjct: 509 HLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFRE 568
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M+D + PD +T SLL AC + +G + + G ++ ++ + +
Sbjct: 569 MQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGF 628
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A K++ + D+ W +++ AC H E
Sbjct: 629 LEMAYDFIKDMPLHPDASIWGALLGACRIHGNIE 662
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 4/116 (3%)
Query: 398 KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARK 457
K + I FN + +C K + +LH + +G F+ L+++Y G + +R
Sbjct: 73 KNEEIDFNSLFDSCTKTL---LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRG 129
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL-GVSPNLVTLVGVLTAC 512
F+ ++ DV +W+S+I Y + G EA+ F ++ + + T VL AC
Sbjct: 130 TFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC 185
>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 628
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 164/562 (29%), Positives = 280/562 (49%), Gaps = 51/562 (9%)
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
LL + P+V + L + + + R+ P + S + IA + Q + +
Sbjct: 9 LLRRTLPEVCKTTYQLR--SRAVTTQTNRLAL--FPGNDFFSCNSHIACDTDEKQSSVDL 64
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
KL Q+ Q G P ++ +C+ GSV +G QLH+ +IK S++ +AL+ MY
Sbjct: 65 KLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDMY 124
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K + A+ +F + ++V +W S+I+ + +G A+ F EM+ G P F
Sbjct: 125 GKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGI-DPTPFSV 183
Query: 242 GSVFSACSNF----------------------------------------ARILFNEIDS 261
+V C +R++F+ +
Sbjct: 184 SAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPE 243
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
++ +W +++AG A AM L +M+ + + +T + LL + L QV
Sbjct: 244 RNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQV 303
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA---DSVSWNSIIAACLQ 378
H II+ G +SN + ++T+Y++CS ++L F ++ D +SWN++I
Sbjct: 304 HCRIIREGLESNSYLEVTLVTVYSECS--SSSLEDFNKVCSGVTRWDQISWNAVIGGLSN 361
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
E + FS+M + I D TF V+ A +++L+ Q+H + K G ++ V
Sbjct: 362 LGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNV 421
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
NGL+ +Y +CGS+ A+++F+ M+ DV+SW+SL+ G A G G EA++LF +MR GV
Sbjct: 422 QNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRSGV 481
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI-IPTREHCSCVVDLLARAGCVHEA 557
P+ T + VL+AC HVGL+++GL + +M N+Y + PT EH S +VDL +RAG + EA
Sbjct: 482 KPDNTTFLVVLSACRHVGLLDKGLEYFDLMRNDYSLESPTTEHYSSMVDLFSRAGYLSEA 541
Query: 558 EDFINQMACDADIVVWKSLLAS 579
EDFIN M + V+K+LL++
Sbjct: 542 EDFINTMPIEPGPSVYKALLSA 563
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 219/422 (51%), Gaps = 48/422 (11%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++S+C+ S+ +G ++H I+ +V + + +++MYGKCG++ A+ FD+MP RN
Sbjct: 85 MVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRN 144
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
VV+W ++I+G AI+L+++M++ G+ P F+ +++ C + LG Q+H
Sbjct: 145 VVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHG 204
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS------- 213
+K +++ LI +Y+K I +R +F + +++ +W SM+A ++
Sbjct: 205 LSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPVA 264
Query: 214 ---------KLGYELEALCH-----------------------FNEMLHHGAYQPNEFIF 241
+LG L + + E L +Y E
Sbjct: 265 AMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYL--EVTL 322
Query: 242 GSVFSACSNFARILFNEIDSP----DLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
+V+S CS+ + FN++ S D SWNA+I G+++ N A+ FS+MR +
Sbjct: 323 VTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDM 382
Query: 298 DGLTVHSLLCACIGRL-TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
D T S+L A IG + TL +G Q+H+ ++K G+ SN+ V N +++MYA+C + +A V
Sbjct: 383 DLFTFTSVLRA-IGMISTLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRV 441
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + ++ D +SWNS+++ C H E LF +M S +KPD+ TF V+ AC +
Sbjct: 442 FSLMDRH-DVISWNSLLSGCAYHGYGREAVELFEQMRRSGVKPDNTTFLVVLSACRHVGL 500
Query: 417 LE 418
L+
Sbjct: 501 LD 502
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 150/292 (51%), Gaps = 17/292 (5%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGS--LED 88
IR+ TY L+S+ SS L ++VH I+ + + L+ ++ +Y +C S LED
Sbjct: 277 IRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVTVYSECSSSSLED 336
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
+ + + +SW A+I G S A+K + +M Q+G+ FTF S+++A
Sbjct: 337 FNKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGM 396
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+ ++ G+Q+HA V+K+ +GS+L QN L++MY + I DA+ VFS + R DV SW S+
Sbjct: 397 ISTLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSL 456
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------FARILFNE- 258
++ + GY EA+ F +M G +P+ F V SAC + + ++ N+
Sbjct: 457 LSGCAYHGYGREAVELFEQMRRSGV-KPDNTTFLVVLSACRHVGLLDKGLEYFDLMRNDY 515
Query: 259 -IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
++SP +++++ + +EA + M + P +LL AC
Sbjct: 516 SLESPTTEHYSSMVDLFSRAGYLSEAEDFINTM---PIEPGPSVYKALLSAC 564
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 180/406 (44%), Gaps = 51/406 (12%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQ--PDVVLQNHILNMYGKCGSLEDARMG 92
P + + ++ C + +LG +VH L KC ++V+ ++++Y K +++ +R+
Sbjct: 180 PFSVSAVLVGCWRMEDTKLGIQVHG--LSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLM 237
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FD MP+RN+++WT+M+AG + Q A+ L M + G+ T+ ++ + S +
Sbjct: 238 FDLMPERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDL 297
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTK--FDRILDARNVFSGIARKDVTSWGSMIA 210
+Q+H +I+ S+ + L+ +Y++ + D V SG+ R D SW ++I
Sbjct: 298 DHCKQVHCRIIREGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIG 357
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------------- 249
S LG AL F++M G + F F SV A
Sbjct: 358 GLSNLGNGEAALKCFSKMRQAGI-DMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYG 416
Query: 250 -------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
N A+ +F+ +D D+ SWN+L++G A H EA+ LF +M
Sbjct: 417 SNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLLSGCAYHGYGREAVELFEQM 476
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC---NAILTMYAKC 347
R + PD T +L AC L +G++ +++ + P ++++ ++++
Sbjct: 477 RRSGVKPDNTTFLVVLSACRHVGLLDKGLEYFD-LMRNDYSLESPTTEHYSSMVDLFSRA 535
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
L A + + ++++AC H E R ++L
Sbjct: 536 GYLSEAEDFINTMPIEPGPSVYKALLSACQVHGNVEIAVRCAKKLL 581
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/594 (28%), Positives = 278/594 (46%), Gaps = 62/594 (10%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
I +T LIS + L + H ++ + Q D+ + G+ AR
Sbjct: 6 ISRNTLLALISKACTFPHLA---ETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARAL 62
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM-PGQFTFGSIIKACSGLGS 151
F +P+ ++ + +I G S + + +I Y +L++ + P FT+ I A
Sbjct: 63 FFSVPKPDIFLFNVLIKGFSFS-PDASSISFYTHLLKNTTLSPDNFTYAFAISASPDDN- 120
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
LG LHAH + S+L +AL+ +Y KF R+ AR VF + +D W +MI
Sbjct: 121 --LGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITG 178
Query: 212 FSKLGYELEALCHFNEMLHHG----------------------------------AYQPN 237
+ +++ F +M+ G + +
Sbjct: 179 LVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFD 238
Query: 238 EFIFG---SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
+++ SVFS C + AR+LF I PDL S+NALI+G + + A+ F
Sbjct: 239 DYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYF----- 293
Query: 293 RELLPDGLTVHS-------LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
RELL G V S + + G L L +Q + +K G V A+ T+Y+
Sbjct: 294 RELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQ--GFCVKSGTILQPSVSTALTTIYS 351
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFN 405
+ + + A +F E + +WN++I+ Q E LF M+ ++ P+ +T
Sbjct: 352 RLNEIDLARQLFDESSEKT-VAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTIT 410
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
++ ACA++ +L +H I L +++V L+D+Y KCG++ A +LF+
Sbjct: 411 SILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEK 470
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
+ V+W+++I GY G GDEALKLF M LG P+ VT + VL ACSH GLV EG ++
Sbjct: 471 NTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIF 530
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M N+Y I P EH +C+VD+L RAG + +A +FI +M + VW +LL +
Sbjct: 531 HAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGA 584
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 216/489 (44%), Gaps = 45/489 (9%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
NT + TYA ISA LG +H H ++ ++ + + ++++Y K +
Sbjct: 98 KNTTLSPDNFTYAFAISASPDD---NLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRV 154
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
AR FDKMP R+ V W MI G +N +D+++++ M+ GV T +++ A
Sbjct: 155 AYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAV 214
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
+ + V +G + +K LI++++K + + AR +F I + D+ S+
Sbjct: 215 AEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYN 274
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHG---------AYQPNEFIFGSVFSACS-------- 249
++I+ FS G A+ +F E+L G P FG + AC
Sbjct: 275 ALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKS 334
Query: 250 ----------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
+ AR LF+E +A+WNA+I+G A A+SLF
Sbjct: 335 GTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLF 394
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
EM E P+ +T+ S+L AC L G VH I + N+ V A++ MYAKC
Sbjct: 395 QEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKC 454
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
+ A +F +L ++V+WN++I H +E +LF+ ML +P +TF V
Sbjct: 455 GNISEASQLF-DLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSV 513
Query: 408 MGACAKMASLEMVTQL-HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NP 465
+ AC+ + ++ H + K + ++DI + G L A + M P
Sbjct: 514 LYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEP 573
Query: 466 DVVSWSSLI 474
W +L+
Sbjct: 574 GPAVWGTLL 582
>gi|255586014|ref|XP_002533676.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526427|gb|EEF28706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 726
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 176/581 (30%), Positives = 293/581 (50%), Gaps = 53/581 (9%)
Query: 45 CSSLRSLQLGRKVHDHILLSKCQPDVV--LQNHILNMYGKCGSLEDARMGFDKMPQRNVV 102
C LR+L +++H +L+S + + +++ Y K LE A F + + N +
Sbjct: 38 CKDLRTL---KQIHASLLVSTGFNESISFPSTKLISFYSKFNDLESAISVFSLLQEPNTL 94
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS-VCLGRQLHAH 161
SW ++ +A+ LY +M +SGV FTF +I +A L S V LG+ +H
Sbjct: 95 SWNLIMRTHLDFGLVTEALLLYKKMRESGVKTDAFTFPTINRAVMSLKSDVLLGKMVHCD 154
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
+K G L N +I +Y + + R +F ++ +D+ SW SMI+ + G A
Sbjct: 155 AMKLGFGYDLYFCNTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFSA 214
Query: 222 LCHFNEM-------------LHHGAYQPNEF----------------IFGSV-------- 244
FN+M + G Y + F I+GSV
Sbjct: 215 FELFNKMRLEMEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMY 274
Query: 245 -FSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR-DRELLPDGLTV 302
+ + LF EI D+ SWN LI A +A E + F++MR + L + LT+
Sbjct: 275 SITGSAKEVESLFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQMRGEVALSSETLTL 334
Query: 303 HSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
+ A IG L +G ++HS+ IK+G +V + ++L YAKC L N++ +F E+
Sbjct: 335 VISVFAKIGNLV--EGEKLHSFSIKVGLCDDVLLA-SLLDFYAKCGELRNSVQLFGEIPC 391
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
+ S +W +++ C+Q+ +E LF +M AS ++ ++ AC+ + SL++ +
Sbjct: 392 RSSS-TWKLMMSGCIQNGYFDEAIHLFRQMQASGVQLQAQILGSLVDACSHLGSLQLCKE 450
Query: 423 LHCYITKTGLAF----DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
+H Y+T+ ++ + ++++YI+CGS+ SAR+ FN M D ++W+S+I GY
Sbjct: 451 IHGYLTRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTSMIEGYG 510
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
G EALKLF +M V PN VT + +L+ACSH GL+ +G L+ M+ +G+ P
Sbjct: 511 IHGMAIEALKLFNQMLVERVLPNRVTFLSLLSACSHSGLIRQGCELFLSMKWVFGMEPDL 570
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H +C+VDLL R G + EA I +M AD +W +L+AS
Sbjct: 571 DHYTCMVDLLGRCGKIKEALAMIIRMVVVADSRIWGALVAS 611
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 139/281 (49%), Gaps = 16/281 (5%)
Query: 24 FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
F+Q + + T +IS + + +L G K+H + DV+L + +L+ Y KC
Sbjct: 318 FNQMRGEVALSSETLTLVISVFAKIGNLVEGEKLHSFSIKVGLCDDVLLAS-LLDFYAKC 376
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G L ++ F ++P R+ +W M++GC QN ++AI L+ QM SGV GS++
Sbjct: 377 GELRNSVQLFGEIPCRSSSTWKLMMSGCIQNGYFDEAIHLFRQMQASGVQLQAQILGSLV 436
Query: 144 KACSGLGSVCLGRQLHAHVIKS----EHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR 199
ACS LGS+ L +++H ++ ++ G ++ +++ MY + I AR F+ +
Sbjct: 437 DACSHLGSLQLCKEIHGYLTRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVA 496
Query: 200 KDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----- 254
KD +W SMI + G +EAL FN+ML PN F S+ SACS+ I
Sbjct: 497 KDNITWTSMIEGYGIHGMAIEALKLFNQMLVERVL-PNRVTFLSLLSACSHSGLIRQGCE 555
Query: 255 LFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEM 290
LF + PDL + ++ + EA+++ M
Sbjct: 556 LFLSMKWVFGMEPDLDHYTCMVDLLGRCGKIKEALAMIIRM 596
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 172/404 (42%), Gaps = 50/404 (12%)
Query: 27 NNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCG 84
N + + P+ T ++ C + + GR++H +I+ + +QN IL MY G
Sbjct: 219 NKMRLEMEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMYSITG 278
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
S ++ F ++ +R+V+SW +I + + + + QM + + T +I
Sbjct: 279 SAKEVESLFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQMRGEVALSSE-TLTLVIS 337
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
+ +G++ G +LH+ IK ++ +L+ Y K + ++ +F I + ++
Sbjct: 338 VFAKIGNLVEGEKLHSFSIKVGLCDDVLLA-SLLDFYAKCGELRNSVQLFGEIPCRSSST 396
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--------------- 249
W M++ + GY EA+ F +M G Q I GS+ ACS
Sbjct: 397 WKLMMSGCIQNGYFDEAIHLFRQMQASGV-QLQAQILGSLVDACSHLGSLQLCKEIHGYL 455
Query: 250 --NF---------------------------ARILFNEIDSPDLASWNALIAGVASHSNA 280
NF AR FN + + D +W ++I G H A
Sbjct: 456 TRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTSMIEGYGIHGMA 515
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH-SYIIKMGFDSNVPVCNA 339
EA+ LF++M +LP+ +T SLL AC + QG ++ S G + ++
Sbjct: 516 IEALKLFNQMLVERVLPNRVTFLSLLSACSHSGLIRQGCELFLSMKWVFGMEPDLDHYTC 575
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
++ + +C + AL + + ADS W +++A+C H +
Sbjct: 576 MVDLLGRCGKIKEALAMIIRMVVVADSRIWGALVASCRVHGDKK 619
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 4/153 (2%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI---LLSKC 66
C QN Y + + + ++++ L+ ACS L SLQL +++H ++
Sbjct: 404 CIQNGYFDEAIHLFRQMQASGVQLQAQILGSLVDACSHLGSLQLCKEIHGYLTRNFFYIL 463
Query: 67 QPDVV-LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ D + L ILNMY +CGS+ AR F++M ++ ++WT+MI G + +A+KL+
Sbjct: 464 EGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTSMIEGYGIHGMAIEALKLFN 523
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
QML V+P + TF S++ ACS G + G +L
Sbjct: 524 QMLVERVLPNRVTFLSLLSACSHSGLIRQGCEL 556
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 153/495 (30%), Positives = 240/495 (48%), Gaps = 44/495 (8%)
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
ML GV TF +++ + ++ G+ +H+ V +SEH + AL+ YTK
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 187 ILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFS 246
+ DAR VF G+ + V +W SMI+A+S EA F M H G + + F S+
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGE-RCDRVTFLSILD 119
Query: 247 ACSN--------------------------------FARI--------LFNEIDSPDLAS 266
AC N +AR +F + +L +
Sbjct: 120 ACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLIT 179
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
W+A+I A H + EA+ F M+ +LP+ +T SLL L + ++H I
Sbjct: 180 WSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLIT 239
Query: 327 KMGFDSNVPVCNAILTMYAKCSV--LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
+ G D + NA++ +Y +C L A ++ +E+ + + +WN +I H ++ E
Sbjct: 240 EHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQIT-AWNVLINGYTLHGRSRE 298
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMD 444
+ R+ I D +TF V+ AC SL +H + GL DV V N L +
Sbjct: 299 ALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTN 358
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y KCGS+ +AR++F+ M VSW+ ++ YAQ G +E LKL +M GV N +T
Sbjct: 359 MYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGIT 418
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
V VL++CSH GL+ EG + + ++ GI EH C+VDLL RAG + EAE +I++M
Sbjct: 419 FVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKM 478
Query: 565 ACDADIVVWKSLLAS 579
+ +IV W SLL +
Sbjct: 479 PSEPEIVTWASLLGA 493
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 228/482 (47%), Gaps = 46/482 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++++ +L+ G+ +H + S+ DV + ++N Y KCGSL DAR FD M
Sbjct: 12 TFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGM 71
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P R+V +W +MI+ S + + +A ++ +M G + TF SI+ AC ++ G+
Sbjct: 72 PCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGK 131
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+ + ++ L ALI MY + +A VF + +K++ +W ++I AF+ G
Sbjct: 132 HVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHG 191
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGS--------------------------------- 243
+ EAL +F M G PN F S
Sbjct: 192 HCGEALRYFRMMQQEGIL-PNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMS 250
Query: 244 -----VFSACS----NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
V+ C + A ++ E+D + +WN LI G H + EA+ + ++
Sbjct: 251 NALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEA 310
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ D +T S+L AC +L +G +HS ++ G DS+V V NA+ MY+KC + NA
Sbjct: 311 IPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENAR 370
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F + + +VSWN ++ A QH ++EE+ +L +M +K + ITF V+ +C+
Sbjct: 371 RIFDSMPIRS-AVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHA 429
Query: 415 ASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN-PDVVSWSS 472
+ E H G+ L+D+ + G L A K + M + P++V+W+S
Sbjct: 430 GLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWAS 489
Query: 473 LI 474
L+
Sbjct: 490 LL 491
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 171/395 (43%), Gaps = 60/395 (15%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ AC + +LQ G+ V + I + + D+ + ++ MY +C S E+A F +M
Sbjct: 113 TFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRM 172
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA---CSGLGSVC 153
Q+N+++W+A+I + + +A++ + M Q G++P + TF S++ SGL +
Sbjct: 173 KQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELS 232
Query: 154 LGRQLHAHVIKSEHG--SHLIAQNALIAMYTKFDR-ILD-ARNVFSGIARKDVTSWGSMI 209
H++ +EHG NAL+ +Y + + LD A + + + +T+W +I
Sbjct: 233 -----RIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLI 287
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------ 251
++ G EAL + + L A ++ F SV +AC++
Sbjct: 288 NGYTLHGRSREALETY-QRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGL 346
Query: 252 ----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
AR +F+ + SWN ++ A H + E + L +
Sbjct: 347 DSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRK 406
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNA----ILTMYA 345
M + +G+T S+L +C + +G Q Y +G D + V ++ +
Sbjct: 407 MEQEGVKLNGITFVSVLSSCSHAGLIAEGCQ---YFHSLGHDRGIEVKTEHYGCLVDLLG 463
Query: 346 KCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+ L A ++ + V+W S++ AC H
Sbjct: 464 RAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHK 498
>gi|242066372|ref|XP_002454475.1| hypothetical protein SORBIDRAFT_04g031840 [Sorghum bicolor]
gi|241934306|gb|EES07451.1| hypothetical protein SORBIDRAFT_04g031840 [Sorghum bicolor]
Length = 706
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 164/536 (30%), Positives = 272/536 (50%), Gaps = 21/536 (3%)
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
L Q + N +L+ Y +CG L A D P+R+ ++ ++I+ + DA++
Sbjct: 58 LRSPQAPLAATNSLLHAYLQCGLLSRALRLLDGTPRRDAATYASLISAHCRLGAPLDALR 117
Query: 123 LYIQMLQSG-----VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNAL 177
++ ML G V P +FT ++++AC LGR +H +++ +L
Sbjct: 118 AFLDMLDWGCSDAAVRPNEFTAAAVLQACGLARDERLGRMVHGYLVAGGFCGDPFVVGSL 177
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN 237
+ MY K ++ AR + G+ +DV SW ++I+ G E L F ML G PN
Sbjct: 178 VNMYAKAGDVVSARRLVLGLPCRDVVSWTAIISGCVLNGMLEEGLEVFVMMLEDGVL-PN 236
Query: 238 EFIFGSVFSACSNF-ARILFNEIDS--------PDLASWNALIAGVASHSNANEAMSLFS 288
SV ACS A LF+ + + D + N+LI A + EA+ LF
Sbjct: 237 NVTMLSVIQACSLMGASELFSPVHALVVLLELEHDASVVNSLIMMYAKNGFVEEAIWLFR 296
Query: 289 E--MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
++ + + + ++L C ++ G+ VH++ IK+G ++ + N+++ MYA+
Sbjct: 297 GFYLKSGNVCSNEDVLAAVLYGCTISGSVKNGVGVHAHTIKIGAFPSISIENSLMGMYAR 356
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ--IKPDHITF 404
+ A VF+ + K D VSWN+II+ + ++ E LFS + A+ + PD +T
Sbjct: 357 FEQIDAAHFVFEGM-KVKDIVSWNTIISCLAKSDRVNEAMELFSVLHAAAGGLAPDFVTV 415
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
++ AC+ L LH YI K+G +DV + N L+ +Y K G + A +F M+
Sbjct: 416 LSILQACSNAGLLHQGQMLHGYIMKSGFVYDVSICNALITMYAKLGRIDFAEMIFERMDI 475
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS-PNLVTLVGVLTACSHVGLVEEGLH 523
D+VSW+S+I Y G G AL++F +++ G PN +T V V++ACSH GL+ EG
Sbjct: 476 KDLVSWNSMINAYGMHGDGHLALRVFHQLKDAGTPVPNAITFVSVISACSHSGLISEGYK 535
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ M ++ I P+ +H +CVVDLL R+G EAE+FI M + +W LLA+
Sbjct: 536 CFESMGRDHSIEPSMDHYACVVDLLGRSGRFAEAEEFIRDMPVHPNSSIWGPLLAA 591
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/432 (32%), Positives = 225/432 (52%), Gaps = 34/432 (7%)
Query: 6 VSSLCKQNLYNEALVAY----DFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
+S+ C+ +AL A+ D+ ++ +R T A ++ AC R +LGR VH ++
Sbjct: 103 ISAHCRLGAPLDALRAFLDMLDWGCSDAAVRPNEFTAAAVLQACGLARDERLGRMVHGYL 162
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ D + ++NMY K G + AR +P R+VVSWTA+I+GC N + +
Sbjct: 163 VAGGFCGDPFVVGSLVNMYAKAGDVVSARRLVLGLPCRDVVSWTAIISGCVLNGMLEEGL 222
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI--KSEHGSHLIAQNALIA 179
++++ ML+ GV+P T S+I+ACS +G+ L +HA V+ + EH + ++ N+LI
Sbjct: 223 EVFVMMLEDGVLPNNVTMLSVIQACSLMGASELFSPVHALVVLLELEHDASVV--NSLIM 280
Query: 180 MYTKFDRILDARNVFSGI--------ARKDVTS---WGSMIAAFSKLGYELEALCHFNEM 228
MY K + +A +F G + +DV + +G I+ K G + A
Sbjct: 281 MYAKNGFVEEAIWLFRGFYLKSGNVCSNEDVLAAVLYGCTISGSVKNGVGVHA-----HT 335
Query: 229 LHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEA 283
+ GA+ P+ I S+ + F +I +F + D+ SWN +I+ +A NEA
Sbjct: 336 IKIGAF-PSISIENSLMGMYARFEQIDAAHFVFEGMKVKDIVSWNTIISCLAKSDRVNEA 394
Query: 284 MSLFSEMRDRE--LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
M LFS + L PD +TV S+L AC L+QG +H YI+K GF +V +CNA++
Sbjct: 395 MELFSVLHAAAGGLAPDFVTVLSILQACSNAGLLHQGQMLHGYIMKSGFVYDVSICNALI 454
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML-ASQIKPD 400
TMYAK + A ++F+ + D VSWNS+I A H R+F ++ A P+
Sbjct: 455 TMYAKLGRIDFAEMIFERMDIK-DLVSWNSMINAYGMHGDGHLALRVFHQLKDAGTPVPN 513
Query: 401 HITFNDVMGACA 412
ITF V+ AC+
Sbjct: 514 AITFVSVISACS 525
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 125/251 (49%), Gaps = 3/251 (1%)
Query: 3 NDYVSSLCKQNLYNEALVAY-DFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHI 61
N + K EA+ + F + N+ A ++ C+ S++ G VH H
Sbjct: 276 NSLIMMYAKNGFVEEAIWLFRGFYLKSGNVCSNEDVLAAVLYGCTISGSVKNGVGVHAHT 335
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ P + ++N ++ MY + ++ A F+ M +++VSW +I+ +++ + N+A+
Sbjct: 336 IKIGAFPSISIENSLMGMYARFEQIDAAHFVFEGMKVKDIVSWNTIISCLAKSDRVNEAM 395
Query: 122 KLY--IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
+L+ + G+ P T SI++ACS G + G+ LH +++KS + NALI
Sbjct: 396 ELFSVLHAAAGGLAPDFVTVLSILQACSNAGLLHQGQMLHGYIMKSGFVYDVSICNALIT 455
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY K RI A +F + KD+ SW SMI A+ G AL F+++ G PN
Sbjct: 456 MYAKLGRIDFAEMIFERMDIKDLVSWNSMINAYGMHGDGHLALRVFHQLKDAGTPVPNAI 515
Query: 240 IFGSVFSACSN 250
F SV SACS+
Sbjct: 516 TFVSVISACSH 526
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 124/250 (49%), Gaps = 19/250 (7%)
Query: 321 VHSYIIKMGF----DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+H+ ++K G + + N++L Y +C +L AL + + D+ ++ S+I+A
Sbjct: 48 LHAALLKSGALRSPQAPLAATNSLLHAYLQCGLLSRALRLLDGTPRR-DAATYASLISAH 106
Query: 377 LQHNQAEELFRLFSRMLA-----SQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+ + R F ML + ++P+ T V+ AC + +H Y+ G
Sbjct: 107 CRLGAPLDALRAFLDMLDWGCSDAAVRPNEFTAAAVLQACGLARDERLGRMVHGYLVAGG 166
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
D FV+ L+++Y K G + SAR+L + DVVSW+++I G G +E L++F
Sbjct: 167 FCGDPFVVGSLVNMYAKAGDVVSARRLVLGLPCRDVVSWTAIISGCVLNGMLEEGLEVFV 226
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLL--- 548
M GV PN VT++ V+ ACS +G E ++ ++ ++ EH + VV+ L
Sbjct: 227 MMLEDGVLPNNVTMLSVIQACSLMGASELFSPVHALV-----VLLELEHDASVVNSLIMM 281
Query: 549 -ARAGCVHEA 557
A+ G V EA
Sbjct: 282 YAKNGFVEEA 291
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/444 (32%), Positives = 231/444 (52%), Gaps = 46/444 (10%)
Query: 180 MYTKFDRILDARNVFSGIARK-DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
MY+K +++ A ++FS + +V ++ ++I+ F G+ E + +M + G P++
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGV-MPDK 59
Query: 239 FIFGSVFSACSNF-------------------------------------ARILFNEIDS 261
F F AC + A++ F E+
Sbjct: 60 FTFPCAIKACLDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPI 119
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
D+ WNA++ G A + F M D ++P TV +L L G +
Sbjct: 120 RDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRII 179
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H + +KMG+DS V V N+++ MY KC + +AL +F E+ + D SWNSI + Q
Sbjct: 180 HGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIF-EMMREKDIFSWNSIXSVHEQCGD 238
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD------ 435
+ RL RML + I+PD +T V+ AC+ +A+L ++H Y+ +GL D
Sbjct: 239 HDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDD 298
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
V + N ++D+Y KCGS+ A +F M N DV SW+ +I+GY G G+EAL++F+RM
Sbjct: 299 VLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCE 358
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
+ + P+ VT VGVL+ACSH G V +G + M+++Y + PT EH +CV+D+L RAG +
Sbjct: 359 VQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLD 418
Query: 556 EAEDFINQMACDADIVVWKSLLAS 579
EA + M +A+ VVW++LLA+
Sbjct: 419 EAYELALTMPIEANPVVWRALLAA 442
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 195/449 (43%), Gaps = 65/449 (14%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
++F Q N + P T+ I AC + + +K+H + + DV + + ++N
Sbjct: 43 GFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVN 99
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFT 138
Y K G +E A++ F+++P R+VV W AM+ G +Q Q ++ + +M V+P +FT
Sbjct: 100 CYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFT 159
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
I+ + +G + GR +H +K + S + N+LI MY K I DA +F +
Sbjct: 160 VTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR 219
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------- 251
KD+ SW S+ + + G L + ML G QP+ +V ACS+
Sbjct: 220 EKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGI-QPDLVTVTTVLPACSHLAALMHGR 278
Query: 252 ---------------------------------------ARILFNEIDSPDLASWNALIA 272
A ++F + + D+ASWN +I
Sbjct: 279 EIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIM 338
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G H NEA+ +FS M + +L PD +T +L AC + QG +++ +M
Sbjct: 339 GYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQG---RNFLAQMKSKY 395
Query: 333 NVPVC----NAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
+V ++ M + L A + + A+ V W +++AAC H A +
Sbjct: 396 DVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHA--VLAE 453
Query: 389 FSRMLASQIKPDH----ITFNDVMGACAK 413
+ +++P+H + ++V GA +
Sbjct: 454 VAAQRVFELEPEHCGSYVLMSNVYGAVGR 482
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 194/450 (43%), Gaps = 64/450 (14%)
Query: 79 MYGKCGSLEDARMGF-DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQF 137
MY KC + A F D + NV ++ A+I+G N + + Y +M GVMP +F
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
TF IKAC + + +++H + K + +AL+ Y KF + A+ F +
Sbjct: 61 TFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEEL 117
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFA 252
+DV W +M+ ++++G + E + ++ + P+ F + S + N
Sbjct: 118 PIRDVVLWNAMVNGYAQIG-QFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNG 176
Query: 253 RI-----------------------------------LFNEIDSPDLASWNALIAGVASH 277
RI +F + D+ SWN++ +
Sbjct: 177 RIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQC 236
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS----- 332
+ + + L M + PD +TV ++L AC L G ++H Y+I G
Sbjct: 237 GDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDI 296
Query: 333 -NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
+V + NA++ MYAKC + +A LVF+ + N D SWN +I H E +FSR
Sbjct: 297 DDVLLKNAVIDMYAKCGSMRDAHLVFERM-XNKDVASWNIMIMGYGMHGYGNEALEMFSR 355
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM----NGLMDIYI 447
M Q+KPD +TF V+ AC+ V+Q ++ + +DV ++D+
Sbjct: 356 MCEVQLKPDEVTFVGVLSACSHAG---FVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLG 412
Query: 448 KCGSLGSARKLFNFME---NPDVVSWSSLI 474
+ G L A +L M NP V W +L+
Sbjct: 413 RAGQLDEAYELALTMPIEANP--VVWRALL 440
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 135/326 (41%), Positives = 196/326 (60%), Gaps = 6/326 (1%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
A+ +F+++ ++ SW +I+ ++ ++A+ M + P+ T S+L AC G
Sbjct: 19 AQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACDG 78
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
L+ Q+H IIK+G DS+V V +A++ +Y++ L NAL VF E+ D V W+S
Sbjct: 79 ---LFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEM-VTGDLVVWSS 134
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
IIA Q++ +E RLF RM + T V+ AC +A LE+ Q+H ++ K
Sbjct: 135 IIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLKYD 194
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
D+ + N L+D+Y KCGSL A +F M DV+SWS++I G AQ G EALKLF
Sbjct: 195 Q--DLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFE 252
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
M+ LG+ PN VT+VGVL ACSH GLVEEGL+ + M+ +GI P REH C++DLL RA
Sbjct: 253 SMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRA 312
Query: 552 GCVHEAEDFINQMACDADIVVWKSLL 577
G + EA D IN+M C+ D V W++LL
Sbjct: 313 GRLSEAVDLINEMECEPDAVTWRALL 338
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 191/418 (45%), Gaps = 66/418 (15%)
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSG 131
L N ++NMY K G L DA+ FDKMP RNVVSWT MI+ S + A++ + ML+ G
Sbjct: 2 LINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREG 61
Query: 132 VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDAR 191
V P FT+ S+++AC GL ++ RQLH +IK S + ++ALI +Y+++ + +A
Sbjct: 62 VRPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENAL 118
Query: 192 NVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF 251
VF + D+ W S+IA F++ EAL F M G + + SV AC+
Sbjct: 119 RVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAG-FLAQQTTLTSVLRACTGL 177
Query: 252 ARI--------------------------------------LFNEIDSPDLASWNALIAG 273
A + +F + D+ SW+ +IAG
Sbjct: 178 ALLELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAG 237
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM-QVHSYIIKMGFDS 332
+A + + EA+ LF M+ + P+ +T+ +L AC + +G+ HS G D
Sbjct: 238 LAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDP 297
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ-------AEEL 385
++ + + L A+ + E+ D+V+W +++ AC H A+++
Sbjct: 298 GREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQI 357
Query: 386 FRLFSR-----MLASQIKPDHITFNDVMGACAKMAS-----------LEMVTQLHCYI 427
RL + +L S I + +NDV M + +E+ Q+H +I
Sbjct: 358 LRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFI 415
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 158/289 (54%), Gaps = 21/289 (7%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP+ TY+ ++ AC L +L R++H I+ DV +++ ++++Y + G LE+A
Sbjct: 62 VRPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENAL 118
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+M ++V W+++IAG +QN ++A++L+ +M ++G + Q T S+++AC+GL
Sbjct: 119 RVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLA 178
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ LGRQ+H HV+K + LI NAL+ MY K + DA VF + KDV SW +MIA
Sbjct: 179 LLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIA 236
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS---- 261
++ GY EAL F M G +PN V ACS+ + F+ +
Sbjct: 237 GLAQNGYSKEALKLFESMKVLGI-KPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGI 295
Query: 262 -PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
P + +I + +EA+ L +EM E PD +T +LL AC
Sbjct: 296 DPGREHYGCMIDLLGRAGRLSEAVDLINEM---ECEPDAVTWRALLNAC 341
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 77/142 (54%), Gaps = 5/142 (3%)
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
F++N L+++Y+K G L A+ +F+ M + +VVSW+++I Y+ D+AL+ M
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE 556
GV PN+ T VL AC + + + LH I + R S ++D+ +R G +
Sbjct: 61 GVRPNMFTYSSVLRACDGLFNLRQ-LHCCIIKIGLDSDVFVR---SALIDVYSRWGELEN 116
Query: 557 AEDFINQMACDADIVVWKSLLA 578
A ++M D+VVW S++A
Sbjct: 117 ALRVFDEMVT-GDLVVWSSIIA 137
>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Brachypodium distachyon]
Length = 678
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 269/581 (46%), Gaps = 52/581 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+ AC++L SL R +H +L + +L+ Y G L AR D+ P +
Sbjct: 34 LLPACTTLPSL---RALHARLLAHGLLRGLRAHTKLLSCYAALGDLASARRVLDETPHPD 90
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ----FTFGSIIKACSGLGSVCLGR 156
++ + + + +A+ ++ M + P + +KA GR
Sbjct: 91 AYTYKVALGWHAAAGRHAEAVAVHRDMRRR--CPAEQEDVVVLSLALKAAVRSADFGYGR 148
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+LH V+K+ G L N L+ MY K + +AR VF I ++V SW SM++ + G
Sbjct: 149 RLHCDVVKAG-GGDLFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNG 207
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
E L FNEM + P+E+ SV AC+
Sbjct: 208 LAKEGLVLFNEMRQE-SILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFIT 266
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR +F+E+ DL W +I G + + +A+ LF + + ++
Sbjct: 267 AAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIV 326
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P+ +T+ ++L A L G +H +K+G N V NA++ MYAKC L +A +
Sbjct: 327 PNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGI 386
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + N D V+WNS+IA +++ + LFS M PD I+ + + AC +
Sbjct: 387 FGRV-LNKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGD 445
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L + H Y K +++V L+++Y KC L SA+++F+ M + + V+W ++I G
Sbjct: 446 LLIGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGG 505
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y G ++ LF M + PN +L+ CSH G+V G + M + + I P
Sbjct: 506 YGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKKCFESMAHYFNITP 565
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ +H +C+VD+LARAG + EA +FI +M AD +W++ L
Sbjct: 566 SMKHYACMVDVLARAGNLEEALEFIQKMPMQADTSIWQAFL 606
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 72/452 (15%)
Query: 8 SLCKQN-LYNEALVAYDFSQNNTNIRIRPSTY--AGLISACSSLRSLQLGRKVHDHILLS 64
S C QN L E LV ++ + + I PS Y A ++ AC+ L SL GR +H ++
Sbjct: 201 SGCLQNGLAKEGLVLFNEMRQES---ILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKH 257
Query: 65 KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
+ + +L+MY KCG EDAR FD++ ++V WT MI G +QN DA+ L+
Sbjct: 258 GLVSNHFITAAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVGYTQNGSPLDALLLF 317
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
+ ++P T +++ A + L ++ LGR +H +K + + NAL+ MY K
Sbjct: 318 VDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVENDVVMNALVDMYAKC 377
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ DA+ +F + KDV +W S+IA +++ +AL F+ M G+ P+ +
Sbjct: 378 KALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSL-PDAISVVNA 436
Query: 245 FSAC----------------------SNF------------------ARILFNEIDSPDL 264
SAC SN A+ +F+E++ +
Sbjct: 437 LSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNT 496
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
+W A+I G ++ ++ LF+EM + P+ S+L C H+
Sbjct: 497 VTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTC-----------SHTG 545
Query: 325 IIKMG---FDSNVPVCNAILTM---------YAKCSVLCNALLVFKELGKNADSVSWNSI 372
++ +G F+S N +M A+ L AL +++ AD+ W +
Sbjct: 546 MVTVGKKCFESMAHYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQADTSIWQAF 605
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
+ C H++ E +RM+ + PD F
Sbjct: 606 LHGCKLHSRLEFAEEAVNRMMV--LHPDTPDF 635
>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 163/543 (30%), Positives = 259/543 (47%), Gaps = 46/543 (8%)
Query: 80 YGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTF 139
+ G ++DA+ R+ +I G + A+ Y ML +G P +FTF
Sbjct: 52 HAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARPDRFTF 111
Query: 140 GSIIKACSGLGSVCLGRQLHAHVIK-SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
++K C+ LG++ GR H+ I+ + + N+L+A Y + + DA VF G+
Sbjct: 112 PVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMP 171
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEM------------------------------ 228
+DV +W SM+ + G AL F EM
Sbjct: 172 ARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGR 231
Query: 229 ------LHHGAYQPNEFIFGS----VFSACSNFARI--LFNEIDSPDLASWNALIAGVAS 276
+ HG ++ G+ ++ C + A +F + S + +WN +I G A
Sbjct: 232 EVHAYVIRHG--MEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYAL 289
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
+ EA F +M+ + +T +LL AC + G VH YI + F +V +
Sbjct: 290 NERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVL 349
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
A+L MY+K + ++ VF ++ VSWN++IAA + E LF +L
Sbjct: 350 ETALLEMYSKVGKVKSSEKVFGQMTTKT-LVSWNNMIAAYMYKEMYMEAITLFLDLLNQP 408
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
+ PD+ T + V+ A + L Q+H YI + G + +MN +M +Y +CG + S+R
Sbjct: 409 LYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSR 468
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVG 516
++F+ M DV+SW+++I+GYA G G AL++F+ M+ G+ PN T V VLTACS G
Sbjct: 469 EIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSG 528
Query: 517 LVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSL 576
L +EG + M+ +YG+IP EH C+ DLL RAG + E FI M D VW SL
Sbjct: 529 LTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDPTFRVWGSL 588
Query: 577 LAS 579
L +
Sbjct: 589 LTA 591
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 220/489 (44%), Gaps = 52/489 (10%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDH-ILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
RP T+ ++ C+ L +L GR H I L DV N +L Y + G ++DA
Sbjct: 105 RPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAE 164
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGL 149
FD MP R+VV+W +M+ G N A+ + +M ++ V + + AC
Sbjct: 165 RVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLE 224
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
++ GR++HA+VI+ + +++ MY K I A VF+ + + V +W MI
Sbjct: 225 SALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMI 284
Query: 210 AAFS----------------KLGYELEALCHFNEMLH-------------HGAYQPNEFI 240
++ G+++E + N + HG +F+
Sbjct: 285 GGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFL 344
Query: 241 FGSVFSAC-----SNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
V S ++ +F ++ + L SWN +IA EA++LF ++
Sbjct: 345 PHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDL 404
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
++ L PD T+ +++ A + L Q Q+HSYII++G+ N + NAI+ MYA+C +
Sbjct: 405 LNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDV 464
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
++ +F ++ D +SWN++I H Q +FS M + ++P+ TF V+ A
Sbjct: 465 LSSREIFDKMAAK-DVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTA 523
Query: 411 CAKMA-SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN----P 465
C+ + E TQ + G+ + + D+ + G L +++ F+EN P
Sbjct: 524 CSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDL---KEVMQFIENMPIDP 580
Query: 466 DVVSWSSLI 474
W SL+
Sbjct: 581 TFRVWGSLL 589
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 173/395 (43%), Gaps = 49/395 (12%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
++AC +L GR+VH +++ + DV + IL+MY KCG + A F MP R V
Sbjct: 218 LAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTV 277
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
V+W MI G + N + +A ++QM G T +++ AC+ S GR +H +
Sbjct: 278 VTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGY 337
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
+ + + H++ + AL+ MY+K ++ + VF + K + SW +MIAA+ +EA
Sbjct: 338 ITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEA 397
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSA---------------------------------- 247
+ F ++L+ Y P+ F +V A
Sbjct: 398 ITLFLDLLNQPLY-PDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMH 456
Query: 248 ----CSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
C + +R +F+++ + D+ SWN +I G A H A+ +FSEM+ L P+ T
Sbjct: 457 MYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNEST 516
Query: 302 VHSLLCAC-IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKEL 360
S+L AC + LT Q +S G + + + + L + + +
Sbjct: 517 FVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENM 576
Query: 361 GKNADSVSWNSIIAACLQHNQ-------AEELFRL 388
+ W S++ A N AE +F+L
Sbjct: 577 PIDPTFRVWGSLLTASRNRNDIDIAEYAAERIFQL 611
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N+ +++ + +Y EA+ + + N + P T + ++ A L L+ R++H +
Sbjct: 382 NNMIAAYMYKEMYMEAITLF---LDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSY 438
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
I+ + ++ N I++MY +CG + +R FDKM ++V+SW MI G + + Q A
Sbjct: 439 IIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSA 498
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACS 147
++++ +M +G+ P + TF S++ ACS
Sbjct: 499 LEMFSEMKCNGLRPNESTFVSVLTACS 525
>gi|297817172|ref|XP_002876469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322307|gb|EFH52728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 178/615 (28%), Positives = 294/615 (47%), Gaps = 82/615 (13%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHIL-LSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
ST +GL+S C+SL ++ G ++H L D + +L YG+ LE A F+
Sbjct: 116 STVSGLLS-CASL-DIRAGTQLHGLSLKYGLFMADAYVGTCLLCFYGRLELLEMAEQVFE 173
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
MP +++ +W M++ + + + L+ +++ G + + ++K S + +
Sbjct: 174 DMPFKSLETWNHMMSLLGHHGFLKECMFLFRELVGMGACLTESSLLGVLKGVSCENDLEI 233
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
+QLH K + N+LI+ Y K A +F D+ SW ++I A +K
Sbjct: 234 SKQLHCSATKQGLDCEISVVNSLISAYGKCGNTHMAERMFQEAGSWDIVSWNAIIGATAK 293
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFAR---------------- 253
L+ L F M HG + PN+ + SV A S +F R
Sbjct: 294 SENPLKTLKLFVSMPEHG-FSPNQGTYISVLGASSLRQLLSFGRQIHGMLIKNGCKTDIF 352
Query: 254 -------------------ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+ F+ I ++ WNAL++G S+ + +SLF +M
Sbjct: 353 LGNALIDFYAKCGSLEDSHLCFDYIRDKNIVCWNALLSGY-SNKDGPICLSLFLQMLQMG 411
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
P T + L +C + + Q+HS I++MG++ N V ++++ YAK ++ +AL
Sbjct: 412 FRPTEYTFSTTLKSC----CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMSDAL 467
Query: 355 L-------------------VFKELGK------------NADSVSWNSIIAACLQHNQAE 383
++ G+ D+VSWN IAAC + +
Sbjct: 468 FLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDNHG 527
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA-FDVFVMNGL 442
E+ LF ML S I+PD+ TF ++ C+K+ L + + +H ITKT + D FV N L
Sbjct: 528 EVIDLFKHMLQSNIRPDNYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCVDTFVCNVL 587
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y KCGS+ S K+F ++++W++LI +G G EAL+ F SLG P+
Sbjct: 588 IDMYGKCGSIRSVIKVFEETREKNLITWTALISSLGIYGYGHEALEKFKETLSLGFKPDR 647
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
V+ + +LTAC H G+V+EG+ L++ M+ +YGI P +H C VDLLAR G + EAE I+
Sbjct: 648 VSFISILTACRHGGMVKEGMDLFQKMK-DYGIEPEMDHYRCAVDLLARNGYLKEAEHLIH 706
Query: 563 QMACDADIVVWKSLL 577
+M AD VW++ L
Sbjct: 707 RMPFPADAPVWRTFL 721
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 139/588 (23%), Positives = 248/588 (42%), Gaps = 88/588 (14%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
QP V + N+I+ +Y K G + A FD+MP+RN VS+ +I G S+ A + +
Sbjct: 47 QP-VYISNNIICLYEKLGEVSLAGKVFDQMPERNKVSFNTIINGYSKYGDAEKAWGVLSE 105
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG---SHLIAQNALIAMYTK 183
M G +P Q T ++ +C+ L + G QLH +K +G + L+ Y +
Sbjct: 106 MRYFGYLPNQSTVSGLL-SCASL-DIRAGTQLHGLSLK--YGLFMADAYVGTCLLCFYGR 161
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG- 242
+ + A VF + K + +W M++ G+ E + F E++ GA + G
Sbjct: 162 LELLEMAEQVFEDMPFKSLETWNHMMSLLGHHGFLKECMFLFRELVGMGACLTESSLLGV 221
Query: 243 ------------------------------------SVFSACSN--FARILFNEIDSPDL 264
S + C N A +F E S D+
Sbjct: 222 LKGVSCENDLEISKQLHCSATKQGLDCEISVVNSLISAYGKCGNTHMAERMFQEAGSWDI 281
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
SWNA+I A N + + LF M + P+ T S+L A R L G Q+H
Sbjct: 282 VSWNAIIGATAKSENPLKTLKLFVSMPEHGFSPNQGTYISVLGASSLRQLLSFGRQIHGM 341
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
+IK G +++ + NA++ YAKC L ++ L F + ++ + V WN++++ +
Sbjct: 342 LIKNGCKTDIFLGNALIDFYAKCGSLEDSHLCFDYI-RDKNIVCWNALLSG-YSNKDGPI 399
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM- 443
LF +ML +P TF+ + +C + + QLH I + G + +V++ LM
Sbjct: 400 CLSLFLQMLQMGFRPTEYTFSTTLKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMR 455
Query: 444 -------------------------------DIYIKCGSLGSARKLFNFMENPDVVSWSS 472
IY + G + KL + +E PD VSW+
Sbjct: 456 SYAKNQLMSDALFLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNI 515
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR-IMENE 531
I ++ E + LF M + P+ T V +L+ CS + + G ++ I + +
Sbjct: 516 AIAACSRSDNHGEVIDLFKHMLQSNIRPDNYTFVSILSLCSKLCDLTLGSSIHGLITKTD 575
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ + T C+ ++D+ + G + + + +++ W +L++S
Sbjct: 576 FSCVDTFV-CNVLIDMYGKCGSIRSVIKVFEETR-EKNLITWTALISS 621
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 171/413 (41%), Gaps = 79/413 (19%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY ++ A S + L GR++H ++ + C+ D+ L N +++ Y KCGSLED+ + FD +
Sbjct: 318 TYISVLGASSLRQLLSFGRQIHGMLIKNGCKTDIFLGNALIDFYAKCGSLEDSHLCFDYI 377
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+N+V W A+++G S N + L++QMLQ G P ++TF + +K+C V +
Sbjct: 378 RDKNIVCWNALLSGYS-NKDGPICLSLFLQMLQMGFRPTEYTFSTTLKSCC----VTELQ 432
Query: 157 QLHAHVIK--------------------------------SEHGSHLIAQNALIAMYTKF 184
QLH+ +++ + + ++ N + +Y++
Sbjct: 433 QLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMSDALFLLDWASGPTSVVPLNIVAGIYSRR 492
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ ++ + S + + D SW IAA S+ E + F ML +P+ + F S+
Sbjct: 493 GQYHESVKLISTLEQPDTVSWNIAIAACSRSDNHGEVIDLFKHMLQSNI-RPDNYTFVSI 551
Query: 245 FSACSNFARI-----------------------------------------LFNEIDSPD 263
S CS + +F E +
Sbjct: 552 LSLCSKLCDLTLGSSIHGLITKTDFSCVDTFVCNVLIDMYGKCGSIRSVIKVFEETREKN 611
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
L +W ALI+ + + +EA+ F E PD ++ S+L AC + +GM +
Sbjct: 612 LITWTALISSLGIYGYGHEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMDLFQ 671
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
+ G + + + + A+ L A + + AD+ W + + C
Sbjct: 672 KMKDYGIEPEMDHYRCAVDLLARNGYLKEAEHLIHRMPFPADAPVWRTFLDGC 724
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQ---PDVVLQNHILNMYGKCG 84
+NIR T+ ++S CS L L LG +H L++K D + N +++MYGKCG
Sbjct: 538 QSNIRPDNYTFVSILSLCSKLCDLTLGSSIHG--LITKTDFSCVDTFVCNVLIDMYGKCG 595
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
S+ F++ ++N+++WTA+I+ ++A++ + + L G P + +F SI+
Sbjct: 596 SIRSVIKVFEETREKNLITWTALISSLGIYGYGHEALEKFKETLSLGFKPDRVSFISILT 655
Query: 145 ACSGLGSVCLGRQL 158
AC G V G L
Sbjct: 656 ACRHGGMVKEGMDL 669
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 13/178 (7%)
Query: 407 VMGACAKMASLEMVTQLHCY-ITKTGLAFD-VFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
++ C K S LH IT + V++ N ++ +Y K G + A K+F+ M
Sbjct: 18 LLNVCRKAPSFARTKALHALSITLCSVILQPVYISNNIICLYEKLGEVSLAGKVFDQMPE 77
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS---HVGLVEEG 521
+ VS++++I GY+++G ++A + + MR G PN T+ G+L+ S G G
Sbjct: 78 RNKVSFNTIINGYSKYGDAEKAWGVLSEMRYFGYLPNQSTVSGLLSCASLDIRAGTQLHG 137
Query: 522 LHLYRIMENEYGIIPTREHC-SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
L L +YG+ + +C++ R + AE M + + W +++
Sbjct: 138 LSL------KYGLFMADAYVGTCLLCFYGRLELLEMAEQVFEDMPFKS-LETWNHMMS 188
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 135/350 (38%), Positives = 202/350 (57%), Gaps = 11/350 (3%)
Query: 233 AYQPNEFIFGSVFSACSNF-----ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
Y P F+ + + F A++LF+++ ++ SW +I+ ++ + AM L
Sbjct: 315 GYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLL 374
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
+ M ++P+ T S+L AC LY Q+HS+I+K+G +S+V V +A++ +Y+K
Sbjct: 375 AFMFRDGVMPNMFTFSSVLRAC---ERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKM 431
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
L AL VF+E+ DSV WNSIIAA QH+ +E L+ M D T V
Sbjct: 432 GELLEALKVFREM-MTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSV 490
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDV 467
+ AC ++ LE+ Q H ++ K D+ + N L+D+Y KCGSL A+ +FN M DV
Sbjct: 491 LRACTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDV 548
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
+SWS++I G AQ G EAL LF M+ G PN +T++GVL ACSH GLV EG + +R
Sbjct: 549 ISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRS 608
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
M N YGI P REH C++DLL RA + + I++M C+ D+V W++LL
Sbjct: 609 MNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLL 658
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 189/380 (49%), Gaps = 45/380 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY+ LI C + +++ G++VH HI + P L N ++NMY K LE+A++ FDKM
Sbjct: 287 TYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKM 346
Query: 97 PQRNVVSWTAMIAGCSQNYQEND-AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
P+RNVVSWT MI+ S N Q ND A++L M + GVMP FTF S+++AC L +
Sbjct: 347 PERNVVSWTTMISAYS-NAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDL--- 402
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+QLH+ ++K S + ++ALI +Y+K +L+A VF + D W S+IAAF++
Sbjct: 403 KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQH 462
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
EAL H + + + ++ SV AC++
Sbjct: 463 SDGDEAL-HLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLKFDQDLILNN 521
Query: 252 --------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
A+ +FN + D+ SW+ +IAG+A + + EA++LF M+ + P
Sbjct: 522 ALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKP 581
Query: 298 DGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALLV 356
+ +T+ +L AC + +G + + G D +L + + L + + +
Sbjct: 582 NHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKL 641
Query: 357 FKELGKNADSVSWNSIIAAC 376
E+ D V+W +++ AC
Sbjct: 642 IHEMNCEPDVVTWRTLLDAC 661
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 177/397 (44%), Gaps = 49/397 (12%)
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIA 179
A+ + M + GV T+ +IK C G+V G+++H H+ + + N LI
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328
Query: 180 MYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEF 239
MY KF+ + +A+ +F + ++V SW +MI+A+S A+ M G PN F
Sbjct: 329 MYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGV-MPNMF 387
Query: 240 IFGSVFSACSNF-------------------------------------ARILFNEIDSP 262
F SV AC A +F E+ +
Sbjct: 388 TFSSVLRACERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTG 447
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D WN++IA A HS+ +EA+ L+ MR D T+ S+L AC L G Q H
Sbjct: 448 DSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAH 507
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+++K FD ++ + NA+L MY KC L +A +F + K D +SW+++IA Q+ +
Sbjct: 508 VHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKK-DVISWSTMIAGLAQNGFS 564
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG- 441
E LF M KP+HIT V+ AC+ +V + Y + +
Sbjct: 565 MEALNLFESMKVQGPKPNHITILGVLFACSHAG---LVNEGWYYFRSMNNLYGIDPGREH 621
Query: 442 ---LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + L KL + M PDVV+W +L+
Sbjct: 622 YGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLL 658
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 87/153 (56%), Gaps = 3/153 (1%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +++ + + +EAL Y S ST ++ AC+SL L+LGR+ H H+L
Sbjct: 453 NSIIAAFAQHSDGDEALHLYK-SMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVL 511
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
K D++L N +L+MY KCGSLEDA+ F++M +++V+SW+ MIAG +QN +A+
Sbjct: 512 --KFDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALN 569
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
L+ M G P T ++ ACS G V G
Sbjct: 570 LFESMKVQGPKPNHITILGVLFACSHAGLVNEG 602
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 5/180 (2%)
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D IT+++++ C ++ ++H +I G F+ N L+++Y+K L A+ LF
Sbjct: 284 DSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLF 343
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ M +VVSW+++I Y+ D A++L M GV PN+ T VL AC + ++
Sbjct: 344 DKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLK 403
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ LH + + + R S ++D+ ++ G + EA +M D VVW S++A+
Sbjct: 404 Q-LHSWIMKVGLESDVFVR---SALIDVYSKMGELLEALKVFREMMT-GDSVVWNSIIAA 458
>gi|222629606|gb|EEE61738.1| hypothetical protein OsJ_16261 [Oryza sativa Japonica Group]
Length = 767
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 181/627 (28%), Positives = 287/627 (45%), Gaps = 107/627 (17%)
Query: 41 LISACSSLRSLQLGRKVHDHILL-SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR 99
L+ C S + + G+ VH + S PD+ L ++ Y + G + AR FD MP R
Sbjct: 63 LLLCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFDGMPHR 122
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTF---------------GSIIK 144
+VVSWTAM++G ++N + +A++L+ M SG P QFT+ G +
Sbjct: 123 SVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARSGEQVH 182
Query: 145 ACSG--------------------LGSVCLGRQLHAHVIKS--------EHGSHLIAQNA 176
AC+ GSV RQL A + K + I A
Sbjct: 183 ACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVCCISSWQFPERQIRSTA 242
Query: 177 LIAMYTKFDRIL----DARNVFSGIARKD--------------VTSWGSMIAAFSKLGYE 218
T F L AR++ ++ K + SW +M++ +++ G
Sbjct: 243 GSPPVTAFPPDLHLRHQARHLLGAVSAKSPPPARCSMECPHRSLVSWTAMVSGYARNGRP 302
Query: 219 LEALCHFNEMLHHGAYQPNEFIF---------------GSVFSACS-------------- 249
EAL F M GA +PN+F + G AC+
Sbjct: 303 REALELFALMRASGA-RPNQFTYGSAASACAGAGCARSGEQVHACAAKGRFAGDMFVQSA 361
Query: 250 -----------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
AR LF E+ D+ SWNALI G + +A+ LFS M ++PD
Sbjct: 362 LMDMHLRCGSVEDARQLFAEMGKKDVVSWNALIRGFVERGHDGDALGLFSSMLKEAMIPD 421
Query: 299 GLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
T+ S L AC G + + ++ +HS IIK+G+ V +++ YAKC + +A +++
Sbjct: 422 HYTLGSALKAC-GIVGVAVNVELIHSCIIKLGYWDEKVVIGSLINSYAKCRSMSSARVIY 480
Query: 358 KELGKNADSVSWNSIIAA-CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
+ + D VS ++I+ + N +E+ LF ++ + D + + V+ CA +AS
Sbjct: 481 DSISE-PDLVSSTALISGYTMDRNYSEDAMELFCKIHRKGLWIDGVLLSSVLCLCASVAS 539
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
TQ+H Y+ K D+ + N L+D+Y K G A++ F+ M +V+SW+SLI
Sbjct: 540 ARFGTQIHAYMCKKQPMGDIALDNALVDMYAKAGEFSDAKRAFDEMPYRNVISWTSLITA 599
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
+ G G++A+ LF RM GV PN VT + +L+AC H GL +G+ + M + YGI P
Sbjct: 600 CGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGLTNKGMEYFTSMMSRYGIDP 659
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQ 563
EH S +DLLAR G + +A + +
Sbjct: 660 RAEHYSSAIDLLARGGQLEDAWKLVQK 686
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 179/391 (45%), Gaps = 45/391 (11%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
RP+ TY SAC+ + G +VH + D+ +Q+ +++M+ +CGS+EDAR
Sbjct: 318 RPNQFTYGSAASACAGAGCARSGEQVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQ 377
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
F +M +++VVSW A+I G + + DA+ L+ ML+ ++P +T GS +KAC +G
Sbjct: 378 LFAEMGKKDVVSWNALIRGFVERGHDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGV 437
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+H+ +IK + + +LI Y K + AR ++ I+ D+ S ++I+
Sbjct: 438 AVNVELIHSCIIKLGYWDEKVVIGSLINSYAKCRSMSSARVIYDSISEPDLVSSTALISG 497
Query: 212 FS-KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------- 251
++ Y +A+ F + +H + + SV C++
Sbjct: 498 YTMDRNYSEDAMELFCK-IHRKGLWIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQPM 556
Query: 252 ---------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
A+ F+E+ ++ SW +LI + + +A++LF+ M
Sbjct: 557 GDIALDNALVDMYAKAGEFSDAKRAFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRM 616
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAILTMYAKCSV 349
+ + P+ +T SLL AC +GM+ + ++ + G D ++ + + A+
Sbjct: 617 VEDGVRPNDVTFLSLLSACGHCGLTNKGMEYFTSMMSRYGIDPRAEHYSSAIDLLARGGQ 676
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHN 380
L +A + ++ +S +++ AC H
Sbjct: 677 LEDAWKLVQKTNLKPNSSMLGAMLGACKLHG 707
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 135/358 (37%), Positives = 205/358 (57%), Gaps = 8/358 (2%)
Query: 229 LHHGAYQPN-----EFIFGSV-FSACSNFARILFNEIDSPDLASWNALIAGVASHSNANE 282
+ HG N IF V SA +FA +FN+I +P++ +WN +I G A N +
Sbjct: 59 IRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSP 118
Query: 283 AMSLFSEMRD-RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
A+ LFS+M +LPD T L A + + G +HS +++ GFDS V N+++
Sbjct: 119 AVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLV 178
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
MY+ +A VF E+ D V+WNS+I + E L+ M + ++PD
Sbjct: 179 HMYSVFGFAESAYQVF-EIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDG 237
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
T ++ AC ++ +L + ++H Y+ K GL + N L+D+Y KCG+ A+K+F+
Sbjct: 238 FTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDE 297
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
ME VVSW+SLI+G A G G+EALKLF + G+ P+ +T VGVL ACSH G+++EG
Sbjct: 298 MEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEG 357
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ +R M+ EYGI+P EH C+VDLL RAG V +A D+I M + V+W++LL +
Sbjct: 358 FNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGA 415
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 118/229 (51%), Gaps = 3/229 (1%)
Query: 24 FSQNNTNIRIRPST--YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYG 81
FSQ + I P T + L A + L + LG +H ++ + +QN +++MY
Sbjct: 123 FSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYS 182
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
G E A F+ M R+ V+W ++I G + N N+A+ LY +M GV P FT S
Sbjct: 183 VFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVS 242
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
++ AC LG++ LG ++H +++K + A NAL+ +Y+K DA+ VF + +
Sbjct: 243 LLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERS 302
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
V SW S+I + G EAL F E+ G +P+E F V ACS+
Sbjct: 303 VVSWTSLIVGLAVNGLGNEALKLFGELERQG-LKPSEITFVGVLYACSH 350
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 150/336 (44%), Gaps = 49/336 (14%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGLGS 151
F+++ N+ +W MI G +++ + A++L+ QM S ++P TF + KA + L
Sbjct: 92 FNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMD 151
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
V LG +H+ V+++ S QN+L+ MY+ F A VF ++ +D +W S+I
Sbjct: 152 VSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVING 211
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC----------------------- 248
F+ G EAL + EM G +P+ F S+ SAC
Sbjct: 212 FALNGMPNEALTLYREMGSEGV-EPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQ 270
Query: 249 ---------------SNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
NF A+ +F+E++ + SW +LI G+A + NEA+ LF E+
Sbjct: 271 NQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELE 330
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM----GFDSNVPVCNAILTMYAKC 347
+ L P +T +L AC L +G +Y +M G + ++ + +
Sbjct: 331 RQGLKPSEITFVGVLYACSHCGMLDEGF---NYFRRMKEEYGILPRIEHHGCMVDLLCRA 387
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ +A + + ++V W +++ AC H E
Sbjct: 388 GKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLE 423
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + NEAL Y + + T L+SAC L +L LG +VH +++
Sbjct: 206 NSVINGFALNGMPNEALTLYR-EMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMV 264
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ N +L++Y KCG+ DA+ FD+M +R+VVSWT++I G + N N+A+K
Sbjct: 265 KVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALK 324
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLG 150
L+ ++ + G+ P + TF ++ ACS G
Sbjct: 325 LFGELERQGLKPSEITFVGVLYACSHCG 352
>gi|225459405|ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Vitis vinifera]
Length = 595
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 156/516 (30%), Positives = 264/516 (51%), Gaps = 50/516 (9%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVV--LQNHILNMYGKCGSLEDARMGFDKMPQR 99
+ +C ++R + R+VH + KC + V + N++++ Y + G L +AR FDKMP+R
Sbjct: 73 LQSCCTVREV---RRVHAVVF--KCLDNSVTYVNNNLISAYSRFGKLVEARKVFDKMPER 127
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
NVVSWTA++ G S+ +++A++L+ +++GV TF ++ CS LGRQ+H
Sbjct: 128 NVVSWTAVVNGYSRYGFDDEALRLFDDCIENGVRANGKTFVCVLNLCSKRLDFELGRQIH 187
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
A ++K ++ +LI +AL+ Y + + A + F + +DV W +MI A S+ G
Sbjct: 188 ACIVK-DNWRNLIVDSALVCFYAQCGDLSGAFHAFDQMPERDVVCWTTMITACSQQGRGT 246
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------------- 251
EAL F++M+ + + PNEF SV AC
Sbjct: 247 EALSMFSQMMFNTS-SPNEFTVCSVLKACGEEKALEFGKQLHGAIIKKMFKEDVFIGTSL 305
Query: 252 ------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
+R +F+ + + +W ++IAG A + EA+SLF M+ R++ +
Sbjct: 306 VGMYAKCGEILDSRKVFDGMKKRNTVTWTSIIAGYARNGQGEEAISLFRVMKRRKIFANN 365
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
LTV S+L AC L G +VH+ I+K SN+ + + ++ Y KC A V +
Sbjct: 366 LTVVSILRACGSTRNLLMGKEVHAQIMKNSMQSNIYIGSTLVWFYCKCEEHPFASKVLQN 425
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
+ D VSW +II+ E ML ++P+ T++ + ACA + ++
Sbjct: 426 MPLR-DVVSWTAIISGYTSLGHEPEALEFLKEMLEEGVEPNPFTYSSALKACAHLEAILQ 484
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
+H + KT +VFV + L+++Y KCG + A ++F+ M ++VSW ++I+GYA+
Sbjct: 485 GKLIHSSVNKTLALSNVFVGSALINMYAKCGYVSEAIQVFDSMPQRNLVSWKAMIVGYAR 544
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
G EALKL RM++ G+ + L VL+AC V
Sbjct: 545 NGLCGEALKLMYRMQAEGIEVDDYILTTVLSACGDV 580
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 213/450 (47%), Gaps = 44/450 (9%)
Query: 16 NEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
+EAL +D N +R T+ +++ CS +LGR++H I+ + ++++ +
Sbjct: 146 DEALRLFDDCIEN-GVRANGKTFVCVLNLCSKRLDFELGRQIHACIVKDNWR-NLIVDSA 203
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
++ Y +CG L A FD+MP+R+VV WT MI CSQ + +A+ ++ QM+ + P
Sbjct: 204 LVCFYAQCGDLSGAFHAFDQMPERDVVCWTTMITACSQQGRGTEALSMFSQMMFNTSSPN 263
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
+FT S++KAC ++ G+QLH +IK + +L+ MY K ILD+R VF
Sbjct: 264 EFTVCSVLKACGEEKALEFGKQLHGAIIKKMFKEDVFIGTSLVGMYAKCGEILDSRKVFD 323
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----- 250
G+ +++ +W S+IA +++ G EA+ F M + N S+ AC +
Sbjct: 324 GMKKRNTVTWTSIIAGYARNGQGEEAISLFRVMKRRKIF-ANNLTVVSILRACGSTRNLL 382
Query: 251 -----FARILFNEIDS------------------------------PDLASWNALIAGVA 275
A+I+ N + S D+ SW A+I+G
Sbjct: 383 MGKEVHAQIMKNSMQSNIYIGSTLVWFYCKCEEHPFASKVLQNMPLRDVVSWTAIISGYT 442
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
S + EA+ EM + + P+ T S L AC + QG +HS + K SNV
Sbjct: 443 SLGHEPEALEFLKEMLEEGVEPNPFTYSSALKACAHLEAILQGKLIHSSVNKTLALSNVF 502
Query: 336 VCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS 395
V +A++ MYAKC + A+ VF + + + VSW ++I ++ E +L RM A
Sbjct: 503 VGSALINMYAKCGYVSEAIQVFDSMPQR-NLVSWKAMIVGYARNGLCGEALKLMYRMQAE 561
Query: 396 QIKPDHITFNDVMGACAKMASLEMVTQLHC 425
I+ D V+ AC + + HC
Sbjct: 562 GIEVDDYILTTVLSACGDVEWNMESSSDHC 591
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 222/461 (48%), Gaps = 43/461 (9%)
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
R++HA V K S N LI+ Y++F ++++AR VF + ++V SW +++ +S+
Sbjct: 83 RRVHAVVFKCLDNSVTYVNNNLISAYSRFGKLVEARKVFDKMPERNVVSWTAVVNGYSRY 142
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------NFARIL-- 255
G++ EAL F++ + +G + N F V + CS N+ ++
Sbjct: 143 GFDDEALRLFDDCIENGV-RANGKTFVCVLNLCSKRLDFELGRQIHACIVKDNWRNLIVD 201
Query: 256 -------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
F+++ D+ W +I + EA+S+FS+M
Sbjct: 202 SALVCFYAQCGDLSGAFHAFDQMPERDVVCWTTMITACSQQGRGTEALSMFSQMMFNTSS 261
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
P+ TV S+L AC L G Q+H IIK F +V + +++ MYAKC + ++ V
Sbjct: 262 PNEFTVCSVLKACGEEKALEFGKQLHGAIIKKMFKEDVFIGTSLVGMYAKCGEILDSRKV 321
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + K ++V+W SIIA ++ Q EE LF M +I +++T ++ AC +
Sbjct: 322 FDGM-KKRNTVTWTSIIAGYARNGQGEEAISLFRVMKRRKIFANNLTVVSILRACGSTRN 380
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L M ++H I K + ++++ + L+ Y KC A K+ M DVVSW+++I G
Sbjct: 381 LLMGKEVHAQIMKNSMQSNIYIGSTLVWFYCKCEEHPFASKVLQNMPLRDVVSWTAIISG 440
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y G EAL+ M GV PN T L AC+H+ + +G ++ + N+ +
Sbjct: 441 YTSLGHEPEALEFLKEMLEEGVEPNPFTYSSALKACAHLEAILQGKLIHSSV-NKTLALS 499
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
S ++++ A+ G V EA + M ++V WK+++
Sbjct: 500 NVFVGSALINMYAKCGYVSEAIQVFDSMP-QRNLVSWKAMI 539
>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 606
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 151/458 (32%), Positives = 226/458 (49%), Gaps = 49/458 (10%)
Query: 165 SEHGSHLIAQNALIAMYTKFDRIL--DARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL 222
+ G + A N LI Y FD+ L +A N+F+ I +DV +W +MI F+ + +A
Sbjct: 38 TPEGPSVWATN-LIKSY--FDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAW 94
Query: 223 CHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------------- 254
F+EML QPN F SV AC +
Sbjct: 95 TMFSEMLR-SEVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDM 153
Query: 255 -------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
+FN+I SW LIAG + + F +M ++ P+ +
Sbjct: 154 YAASCATMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFS 213
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
AC + G Q+H+ + K G + PV N+IL MY +C+ LC+A F EL
Sbjct: 214 FSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELT 273
Query: 362 KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVT 421
+ + ++WN++IA + + +E L LF +M + KP+ TF + ACA +A L
Sbjct: 274 EK-NLITWNTLIAGYERSDSSESL-SLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQ 331
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
Q+H I + G +V ++N L+D+Y KCGS+ + KLF M D+VSW+++++GY G
Sbjct: 332 QVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHG 391
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC 541
G EA+KLF M G+ P+ + +GVL CSH GLV++GL +R M +Y I P +E
Sbjct: 392 YGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIY 451
Query: 542 SCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
CVVDLL RAG V EA + M + D VW +LL +
Sbjct: 452 RCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGA 489
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 136/464 (29%), Positives = 214/464 (46%), Gaps = 75/464 (16%)
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM 127
P V N I + + K G +A F+++P+R+VV+WTAMI G + + A ++ +M
Sbjct: 42 PSVWATNLIKSYFDK-GLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEM 100
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG--SHLIAQNALIAMYTKFD 185
L+S V P FT S++KAC G+ ++ G AH + ++HG + QNAL+ MY
Sbjct: 101 LRSEVQPNAFTMSSVLKACKGMKALSCGAL--AHSLATKHGIDRSVYVQNALLDMYAASC 158
Query: 186 RIL-DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ DA +VF+ I K SW ++IA F+ G L F +ML PN F F
Sbjct: 159 ATMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDV-GPNSFSFSIA 217
Query: 245 FSACSNF----------------------------------------ARILFNEIDSPDL 264
AC++ A+ F E+ +L
Sbjct: 218 ARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNL 277
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
+WN LIAG S+++E++SLF +M P+ T S+ AC L G QVH
Sbjct: 278 ITWNTLIAGY-ERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGG 336
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEE 384
I++ GFD NV + N+++ MYAKC + ++ +F ++ D VSW +++ H +E
Sbjct: 337 IVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDM-PGRDLVSWTTMMIGYGAHGYGKE 395
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAF-----DVFVM 439
+LF M+ S I+PD I F V+ C+ H + GL + + + +
Sbjct: 396 AVKLFDEMVQSGIQPDRIVFMGVLCGCS-----------HAGLVDKGLKYFRSMLEDYNI 444
Query: 440 NGLMDIYIKC-----GSLGSARKLFNFMEN----PDVVSWSSLI 474
N +IY +C G G + F +EN PD W +L+
Sbjct: 445 NPDQEIY-RCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALL 487
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 117/488 (23%), Positives = 202/488 (41%), Gaps = 87/488 (17%)
Query: 32 RIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYG-KCGSLED 88
++P+ T + ++ AC +++L G H V +QN +L+MY C +++D
Sbjct: 104 EVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDD 163
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A F+ +P + VSWT +IAG + + + QML V P F+F +AC+
Sbjct: 164 ALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACAS 223
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQ--NALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
+ S G+Q+HA V K +G H A N+++ MY + + + DA+ F + K++ +W
Sbjct: 224 ISSYSCGKQIHAAVTK--YGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWN 281
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------------ 254
++IA + + E+L F +M G Y+PN F F S+ +AC+N A +
Sbjct: 282 TLIAGYERSDSS-ESLSLFFQMGSEG-YKPNCFTFTSITAACANLAVLSCGQQVHGGIVR 339
Query: 255 ----------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
LF ++ DL SW ++ G +H EA+ L
Sbjct: 340 RGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKL 399
Query: 287 FSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
F EM + PD + +LC C + +G++ Y M D N+
Sbjct: 400 FDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLK---YFRSMLEDYNI------------ 444
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFND 406
N D + ++ + + EE F+L M +PD +
Sbjct: 445 ----------------NPDQEIYRCVVDLLGRAGRVEEAFQLVENM---PFEPDESVWGA 485
Query: 407 VMGACA--KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
++GAC K+++L + + +A +++ + K G RKL M
Sbjct: 486 LLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNK 545
Query: 465 PDVV--SW 470
V SW
Sbjct: 546 KKEVGKSW 553
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 121/256 (47%), Gaps = 47/256 (18%)
Query: 9 LCKQNL--YNEALVAYDFSQNNTNIRI---------RPS--TYAGLISACSSLRSLQLGR 55
L ++NL +N + Y+ S ++ ++ + +P+ T+ + +AC++L L G+
Sbjct: 272 LTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQ 331
Query: 56 KVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
+VH I+ +V L N +++MY KCGS+ D+ F MP R++VSWT M+ G +
Sbjct: 332 QVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHG 391
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+A+KL+ +M+QSG+ P + F ++ CS G V G +
Sbjct: 392 YGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKY----------------- 434
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
F +L+ N+ D + ++ + G EA +++ + ++
Sbjct: 435 --------FRSMLEDYNI-----NPDQEIYRCVVDLLGRAGRVEEAF----QLVENMPFE 477
Query: 236 PNEFIFGSVFSACSNF 251
P+E ++G++ AC +
Sbjct: 478 PDESVWGALLGACKAY 493
>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
[Vitis vinifera]
Length = 656
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 149/494 (30%), Positives = 248/494 (50%), Gaps = 51/494 (10%)
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKS---EHGSH-------LIAQNALIAMYTKFD 185
Q ++ C G + LG LHA +IK+ G++ ++ N+L++MY++
Sbjct: 44 QVDISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRCG 103
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ DA VF + KD SW S I+ G F ++ G YQ ++ +V
Sbjct: 104 ELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVL 163
Query: 246 SACS----------------------------------------NFARILFNEIDSPDLA 265
+AC + R +F+E+ ++
Sbjct: 164 TACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVV 223
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
+W A+I+G++ E++ LF +MRD + P+ LT S L AC G + +G Q+H +
Sbjct: 224 TWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLV 283
Query: 326 IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
K+G ++ + +A++ MY+KC L +A +F E + D VS I+ Q+ EE
Sbjct: 284 WKLGVHFDLCIESALMDMYSKCGSLEDAWKIF-ESAEEVDEVSMTVILVGLAQNGFEEES 342
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDI 445
++F +M+ + + D + ++G SL + Q+H I K + FV NGL+++
Sbjct: 343 IQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINM 402
Query: 446 YIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTL 505
Y KCG L + K+F +M + VSW+S+I +A+ G G AL+L+ MR GV P VT
Sbjct: 403 YSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTF 462
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
+ +L AC+HVGLVE+G+ M +YGI P EH +CVVD++ RAG ++EA+ FI ++
Sbjct: 463 LSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLP 522
Query: 566 CDADIVVWKSLLAS 579
I+VW++LL +
Sbjct: 523 EKPGILVWQALLGA 536
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/522 (24%), Positives = 226/522 (43%), Gaps = 65/522 (12%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL--- 62
+ +L QN Y+E F+ N +I L+S C L LG +H I+
Sbjct: 25 LKTLILQNPYSET---SKFAINQVDISF-------LLSLCGREGYLHLGSSLHASIIKNF 74
Query: 63 --LSKCQPD-----VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNY 115
L D +V+ N +L+MY +CG L DA FD MP ++ +SW + I+G N
Sbjct: 75 GFLDGNNRDNLRNVIVVWNSLLSMYSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNG 134
Query: 116 QENDAIKLYIQMLQSGVMP-GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
+++ Q+ +SG+ Q T +++ AC + + +H+ V + +
Sbjct: 135 DIEMGFRVFKQLYESGIYQFDQATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVG 194
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAY 234
NALI Y + R VF ++ K+V +W ++I+ S+ + E+L F +M G
Sbjct: 195 NALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKM-RDGPV 253
Query: 235 QPNEFIFGSVFSACSNFARI---------------------------------------- 254
PN + S ACS I
Sbjct: 254 DPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWK 313
Query: 255 LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT 314
+F + D S ++ G+A + E++ +F +M ++ D + ++L +
Sbjct: 314 IFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTS 373
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
L G Q+HS IIK F SN V N ++ MY+KC L +++ +F + + +SVSWNS+IA
Sbjct: 374 LALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQR-NSVSWNSMIA 432
Query: 375 ACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM-VTQLHCYITKTGLA 433
A +H +L+ M + P +TF ++ ACA + +E + L G+
Sbjct: 433 AFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIG 492
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFM-ENPDVVSWSSLI 474
+ ++D+ + G L A+K + E P ++ W +L+
Sbjct: 493 PRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALL 534
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 176/388 (45%), Gaps = 40/388 (10%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T +++AC + + +H + L + ++ + N ++ Y +CG R FD+
Sbjct: 157 ATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDE 216
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M ++NVV+WTA+I+G SQ +++KL+ +M V P T+ S + ACSGL ++ G
Sbjct: 217 MSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREG 276
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
RQ+H V K L ++AL+ MY+K + DA +F D S ++ ++
Sbjct: 277 RQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQN 336
Query: 216 GYELEALCHFNEMLHHGAY-QPNEF-----IFG--------------------------- 242
G+E E++ F +M+ +G PN +FG
Sbjct: 337 GFEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVN 396
Query: 243 ----SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+++S C + + +F + + SWN++IA A H N + A+ L+ EMR +
Sbjct: 397 NGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVW 456
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P +T SLL AC + +GM + S G + ++ M + +L A
Sbjct: 457 PTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKK 516
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAE 383
+ L + + W +++ AC H +E
Sbjct: 517 FIERLPEKPGILVWQALLGACSIHGNSE 544
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 234/454 (51%), Gaps = 50/454 (11%)
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
H++A N +++ + K + +AR++F + +DV +W +MI ++ Y A F+EM
Sbjct: 45 HILATNLIVSYFEK-GLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMF 103
Query: 230 HHGAYQPNEFIFGSVFSACSNF-------------------------------------- 251
G PNEF SV +C N
Sbjct: 104 KQGR-SPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVT 162
Query: 252 ---ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM--RDRELLPDGLTVHSLL 306
A ++F +I + +W LI G + + ++ +M + ++ P +T+
Sbjct: 163 MEAAFLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRA 222
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
A I +T G Q+H+ ++K GF SN+PV N+IL Y +C L A F E+ ++ D
Sbjct: 223 SASIDSVT--TGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEM-EDKDL 279
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
++WN++I+ L+ + + E +F R + P+ TF ++ ACA +A+L QLH
Sbjct: 280 ITWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGR 338
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF-NFMENPDVVSWSSLILGYAQFGCGDE 485
I + G +V + N L+D+Y KCG + + ++F E ++VSW+S+++GY G G E
Sbjct: 339 IYRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAE 398
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
A++LF +M S G+ P+ + + VL+AC H GLVE+GL + +ME+EYGI P R+ +CVV
Sbjct: 399 AVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVV 458
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
DLL RAG + EA + + +M D W ++L +
Sbjct: 459 DLLGRAGKIGEAYELVERMPFKPDESTWGAILGA 492
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 218/446 (48%), Gaps = 43/446 (9%)
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+L +++ Y + G +E+AR FD+MP+R+VV+WTAMI G + + + A + + +M +
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQ 105
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G P +FT S++K+C + + G +H V+K L NAL+ MY ++A
Sbjct: 106 GRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEA 165
Query: 191 RN-VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA---------------- 233
+F I K+ +W ++I F+ LG + L + +ML A
Sbjct: 166 AFLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASAS 225
Query: 234 ------------------YQPNEFIFGSV---FSACSNF--ARILFNEIDSPDLASWNAL 270
+Q N + S+ + C A+ F+E++ DL +WN L
Sbjct: 226 IDSVTTGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTL 285
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I+ + S+++EA+ +F + +P+ T SL+ AC L G Q+H I + GF
Sbjct: 286 ISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGF 344
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+ NV + NA++ MYAKC + ++ VF E+ + + VSW S++ H E LF
Sbjct: 345 NKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFD 404
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEM-VTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
+M++S I+PD I F V+ AC +E + + ++ G+ D + N ++D+ +
Sbjct: 405 KMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRA 464
Query: 450 GSLGSARKLFNFME-NPDVVSWSSLI 474
G +G A +L M PD +W +++
Sbjct: 465 GKIGEAYELVERMPFKPDESTWGAIL 490
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 157/316 (49%), Gaps = 24/316 (7%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
N + P + A +S+ S+ G+++H ++ Q ++ + N IL+ Y +CG L +A
Sbjct: 208 NADVTPYCITIAVRASASIDSVTTGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEA 267
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
+ F +M +++++W +I+ ++ ++A+ ++ + G +P +TF S++ AC+ +
Sbjct: 268 KRYFHEMEDKDLITWNTLISELERS-DSSEALLMFQRFESQGFVPNCYTFTSLVAACANI 326
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI-ARKDVTSWGSM 208
++ G+QLH + + ++ NALI MY K I D+ VF I R+++ SW SM
Sbjct: 327 AALNCGQQLHGRIYRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSM 386
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS-- 261
+ + GY EA+ F++M+ G +P+ +F +V SAC + + FN ++S
Sbjct: 387 MIGYGSHGYGAEAVELFDKMVSSGI-RPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEY 445
Query: 262 ---PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC--------I 310
PD +N ++ + EA L M PD T ++L AC I
Sbjct: 446 GINPDRDIYNCVVDLLGRAGKIGEAYELVERM---PFKPDESTWGAILGACKAHKHTGLI 502
Query: 311 GRLTLYQGMQVHSYII 326
RL + M++ ++
Sbjct: 503 SRLAAKKVMELKPRMV 518
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 182/406 (44%), Gaps = 46/406 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCG-SLEDARMGFDK 95
T + ++ +C +++ L G VH ++ + + + N ++NMY C ++E A + F
Sbjct: 113 TLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAFLIFRD 172
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ +N V+WT +I G + +K+Y QML + ++A + + SV G
Sbjct: 173 IKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASIDSVTTG 232
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+Q+HA V+K S+L N+++ Y + + +A+ F + KD+ +W ++I+ +
Sbjct: 233 KQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLISELERS 292
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--------------------- 254
EAL F G + PN + F S+ +AC+N A +
Sbjct: 293 DSS-EALLMFQRFESQG-FVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNKNVEL 350
Query: 255 -------------------LFNEIDS-PDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+F EI+ +L SW +++ G SH EA+ LF +M
Sbjct: 351 ANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSG 410
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ PD + ++L AC + +G++ + + + G + + + N ++ + + + A
Sbjct: 411 IRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEA 470
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
+ + + D +W +I+ AC H + RL ++ + ++KP
Sbjct: 471 YELVERMPFKPDESTWGAILGACKAHKHTGLISRLAAKKVM-ELKP 515
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 159/571 (27%), Positives = 285/571 (49%), Gaps = 46/571 (8%)
Query: 51 LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAG 110
+ L +++H +++S + L ++N Y G + AR+ FD++ ++V +W +MI+
Sbjct: 56 VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115
Query: 111 CSQNYQENDAIKLYIQMLQSGVMPG-QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGS 169
++ + A+ + + L + + +TF +I+AC L GR++H V+K
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVLKLGFEC 172
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
+ + I Y++F + A N+F + +D+ +W +MI+ F G EAL F+EM
Sbjct: 173 DVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMR 232
Query: 230 HHG----------------------------------AYQPNEFIFGSVFSACSNF---- 251
+ + F+ ++ + + F
Sbjct: 233 FKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELR 292
Query: 252 -ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
A +FN++ D+ SWN+L+A + A+ ++++M ++PD LT+ SL
Sbjct: 293 SAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAA 352
Query: 311 GRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSW 369
+H ++ + F ++ + NAI+ MYAK + +A VF+ L D +SW
Sbjct: 353 ELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVK-DVISW 411
Query: 370 NSIIAACLQHNQAEELFRLFSRM-LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
NS+I Q+ A E ++S M S P+ T+ ++ A +++ +L+ + H +
Sbjct: 412 NSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLI 471
Query: 429 KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
K L FD+FV L+D+Y KCG L A LF + + VSW+++I + G G +A+K
Sbjct: 472 KNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVK 531
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLL 548
LF M+S GV P+ +T V +L+ACSH GLV+EG +++M+ YGI P+ +H C+VDL
Sbjct: 532 LFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLF 591
Query: 549 ARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
RAG + +A +F+ M D+ VW +LL +
Sbjct: 592 GRAGHLEKAFNFVKNMPVRPDVSVWGALLGA 622
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 245/485 (50%), Gaps = 51/485 (10%)
Query: 136 QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFS 195
+ F I C+ V L +QLHA ++ S + LI Y I AR F
Sbjct: 43 EIDFNRIFLYCT---KVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFD 99
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN----- 250
I KDV +W SMI+A++++G+ A+ FNE L Q + + F V AC N
Sbjct: 100 QIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDDGR 159
Query: 251 ------------------------FARI--------LFNEIDSPDLASWNALIAGVASHS 278
++R LF+ + D+ +WNA+I+G +
Sbjct: 160 KVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNG 219
Query: 279 NANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
EA+ +F EMR + + D +T+ SLL C+ + G+ +H Y IK+G + ++ VCN
Sbjct: 220 KVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCN 279
Query: 339 AILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIK 398
A++ MYAK L +A +F ++ K D VSWNS++AA Q+ + ++++M + +
Sbjct: 280 ALINMYAKFGELRSAETIFNQM-KVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVV 338
Query: 399 PDHITFNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARK 457
PD +T + A++ + +H ++T+ D+ + N ++D+Y K G + SARK
Sbjct: 339 PDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARK 398
Query: 458 LFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL-GVSPNLVTLVGVLTACSHVG 516
+F + DV+SW+SLI GY+Q G +EA+ +++ MR G PN T V +LTA S +G
Sbjct: 399 VFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLG 458
Query: 517 LVEEGLHLY-RIMEN--EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVW 573
+++G+ + ++++N + I + +C+VD+ + G + +A ++ + V W
Sbjct: 459 ALKQGMKAHGQLIKNFLYFDIFVS----TCLVDMYGKCGKLADALSLFYEVPHQSS-VSW 513
Query: 574 KSLLA 578
++++
Sbjct: 514 NAIIS 518
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 224/485 (46%), Gaps = 55/485 (11%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +I AC +L GRKVH +L + DV + ++ Y + G + A FD M
Sbjct: 144 TFPPVIRACGNLDD---GRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNM 200
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
R++ +W AMI+G N + +A++++ +M V T S++ C L + G
Sbjct: 201 MIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGV 260
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H + IK L NALI MY KF + A +F+ + +D+ SW S++AAF +
Sbjct: 261 LIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNK 320
Query: 217 YELEALCHFNEMLHHGAYQPNEFI---FGSVFSACSNF---------------------- 251
+ AL +N+M H P+ SV + NF
Sbjct: 321 KPVIALGVYNKM-HSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIAL 379
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE- 294
AR +F + D+ SWN+LI G + + ANEA+ ++S MR
Sbjct: 380 GNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSG 439
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+P+ T S+L A L QGM+ H +IK ++ V ++ MY KC L +AL
Sbjct: 440 AVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADAL 499
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
+F E+ + SVSWN+II+ H + +LF M + +KPDHITF ++ AC+
Sbjct: 500 SLFYEV-PHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHS 558
Query: 415 ASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN----PDVVS 469
++ + +T G+ + ++D++ G G K FNF++N PDV
Sbjct: 559 GLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLF---GRAGHLEKAFNFVKNMPVRPDVSV 615
Query: 470 WSSLI 474
W +L+
Sbjct: 616 WGALL 620
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 198/459 (43%), Gaps = 46/459 (10%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
EAL +D ++ + T + L+ C L + G +H + + + D+ + N +
Sbjct: 223 EALEVFD-EMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNAL 281
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
+NMY K G L A F++M R++VSW +++A QN + A+ +Y +M GV+P
Sbjct: 282 INMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDL 341
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA-QNALIAMYTKFDRILDARNVFS 195
T S+ + LG+ R +H V + H IA NA+I MY K I AR VF
Sbjct: 342 LTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFE 401
Query: 196 GIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI- 254
G+ KDV SW S+I +S+ G EA+ ++ M ++ PN+ + S+ +A S +
Sbjct: 402 GLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALK 461
Query: 255 ---------------------------------------LFNEIDSPDLASWNALIAGVA 275
LF E+ SWNA+I+
Sbjct: 462 QGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHG 521
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNV 334
H +A+ LF EM+ + PD +T SLL AC + +G + + G ++
Sbjct: 522 LHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSL 581
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLA 394
++ ++ + L A K + D W +++ AC H EL R S L
Sbjct: 582 KHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENV-ELVRTVSDHLL 640
Query: 395 SQIKPDHITFNDVMGAC-AKMASLEMVTQLHCYITKTGL 432
+++ +++ + ++ AK+ E V ++ GL
Sbjct: 641 -KVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGL 678
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 4/212 (1%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + L NEA+ Y + + T+ +++A S L +L+ G K H ++
Sbjct: 412 NSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLI 471
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D+ + +++MYGKCG L DA F ++P ++ VSW A+I+ + A+K
Sbjct: 472 KNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVK 531
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG--SHLIAQNALIAM 180
L+ +M GV P TF S++ ACS G V G Q +++ +G L ++ +
Sbjct: 532 LFKEMQSEGVKPDHITFVSLLSACSHSGLVDEG-QWCFQLMQETYGIRPSLKHYGCMVDL 590
Query: 181 YTKFDRILDARNVFSGI-ARKDVTSWGSMIAA 211
+ + + A N + R DV+ WG+++ A
Sbjct: 591 FGRAGHLEKAFNFVKNMPVRPDVSVWGALLGA 622
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 151/469 (32%), Positives = 237/469 (50%), Gaps = 52/469 (11%)
Query: 157 QLHAHVIKSE-----HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
++HAH+IK+ + + ++A I + T D A ++F I D ++ MI
Sbjct: 42 EIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDY---AVSIFRQIDEPDSPAYNIMIRG 98
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
F+ EA+ F EM H + QP+EF F + CS
Sbjct: 99 FTLKQSPHEAILLFKEM-HENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGS 157
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
AR +F+E+ ++ +WN++ AG N E + LF EM
Sbjct: 158 HGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEML 217
Query: 292 DRELLPDGLTVHSLLCACIGRLT-LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ ++ D +T+ S+L AC GRL L G ++ Y+ + G N + +++ MYAKC +
Sbjct: 218 ELDIRFDEVTLVSVLTAC-GRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQV 276
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGA 410
A +F ++ + D V+W+++I+ Q ++ E LF M + I P+ IT ++ +
Sbjct: 277 DTARRLFDQMDRR-DVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSS 335
Query: 411 CAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSW 470
CA + +LE +H +I K + V + LMD Y KCGS+ S+ ++F M +V+SW
Sbjct: 336 CAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSW 395
Query: 471 SSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN 530
+ LI G A G G +AL+ F M V PN VT +GVL+ACSH GLV+EG L+ M
Sbjct: 396 TVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSR 455
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++GI P EH C+VD+L RAG + EA FI M + V+W++LLAS
Sbjct: 456 DFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLAS 504
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 153/592 (25%), Positives = 272/592 (45%), Gaps = 73/592 (12%)
Query: 28 NTNIRIRPSTYAGLI-SACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC--G 84
T+I + P LI C ++R L ++H H++ ++ + ++L
Sbjct: 16 KTSISLFPENPKTLILEQCKTIRDLN---EIHAHLIKTRLLLKPKVAENLLESAAILLPT 72
Query: 85 SLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
S++ A F ++ + + ++ MI G + ++AI L+ +M ++ V P +FTF I+K
Sbjct: 73 SMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILK 132
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
CS L ++ G Q+HA ++K GSH +N LI MY + AR VF ++ ++V +
Sbjct: 133 VCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRT 192
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------- 251
W SM A ++K G E + F+EML + +E SV +AC
Sbjct: 193 WNSMFAGYTKSGNWEEVVKLFHEMLELD-IRFDEVTLVSVLTACGRLADLELGEWINRYV 251
Query: 252 ---------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
AR LF+++D D+ +W+A+I+G + S EA+
Sbjct: 252 EEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREAL 311
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
LF EM+ + P+ +T+ S+L +C L G VH +I K V + A++ Y
Sbjct: 312 DLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFY 371
Query: 345 AKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
AKC + +++ VF ++ KN +SW +I + Q ++ F ML ++P+ +T
Sbjct: 372 AKCGSVESSIEVFGKMPVKNV--LSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVT 429
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM 462
F V+ AC+ ++ L +++ G+ + ++DI + G + A F F+
Sbjct: 430 FIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEA---FQFI 486
Query: 463 EN----PDVVSWSSLILG---YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
+N P+ V W +L+ + G+E+LK + S + + L + + V
Sbjct: 487 KNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTH-SGDYILLSNIYAS---V 542
Query: 516 GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHE--AEDFINQMA 565
G E+ L + M+ E GI T CS L+ G +HE AED ++ +
Sbjct: 543 GRWEDALKVRGEMK-EKGIKKT-PGCS----LIELDGVIHEFFAEDNVHSQS 588
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 147/306 (48%), Gaps = 18/306 (5%)
Query: 275 ASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNV 334
A A ++SLF E P L + C I L ++H+++IK
Sbjct: 10 AKTPTAKTSISLFPEN------PKTLILEQ--CKTIRDLN-----EIHAHLIKTRLLLKP 56
Query: 335 PVCNAILTMYAKC--SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
V +L A + + A+ +F+++ + DS ++N +I E LF M
Sbjct: 57 KVAENLLESAAILLPTSMDYAVSIFRQIDE-PDSPAYNIMIRGFTLKQSPHEAILLFKEM 115
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
+ ++PD TF ++ C+++ +L Q+H I K G FV N L+ +Y CG +
Sbjct: 116 HENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEV 175
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
AR++F+ M +V +W+S+ GY + G +E +KLF M L + + VTLV VLTAC
Sbjct: 176 EVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTAC 235
Query: 513 SHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVV 572
+ +E G + R +E E G+ + +VD+ A+ G V A +QM D+V
Sbjct: 236 GRLADLELGEWINRYVE-EKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMD-RRDVVA 293
Query: 573 WKSLLA 578
W ++++
Sbjct: 294 WSAMIS 299
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 42/275 (15%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
NI T ++S+C+ L +L+ G+ VH I + + V L +++ Y KCGS+
Sbjct: 318 QKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSV 377
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
E + F KMP +NV+SWT +I G + N Q A++ + ML+ V P TF ++ AC
Sbjct: 378 ESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSAC 437
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
S G V GR L ++M F GI + + +G
Sbjct: 438 SHAGLVDEGRDL------------------FVSMSRDF-----------GIEPR-IEHYG 467
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE-------I 259
M+ + G EA M QPN I+ ++ ++C + E I
Sbjct: 468 CMVDILGRAGLIEEAFQFIKNM----PIQPNAVIWRTLLASCKVHKNVEIGEESLKQLII 523
Query: 260 DSPDLASWNALIAGV-ASHSNANEAMSLFSEMRDR 293
P + L++ + AS +A+ + EM+++
Sbjct: 524 LEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEK 558
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.136 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,760,088,127
Number of Sequences: 23463169
Number of extensions: 351676410
Number of successful extensions: 1152673
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9089
Number of HSP's successfully gapped in prelim test: 2327
Number of HSP's that attempted gapping in prelim test: 917288
Number of HSP's gapped (non-prelim): 78198
length of query: 579
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 431
effective length of database: 8,886,646,355
effective search space: 3830144579005
effective search space used: 3830144579005
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 80 (35.4 bits)