BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043608
(579 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/617 (54%), Positives = 439/617 (71%), Gaps = 40/617 (6%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
ND+++SLCK N Y EAL A+DF+Q N++ +IR TY LI ACSS RSL GRK+HDHIL
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S C+ D +L NHIL+MYGKCGSL DAR FD MP+RN+VS+T++I G SQN Q +AI+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
LY++MLQ ++P QF FGSIIKAC+ V LG+QLHA VIK E SHLIAQNALIAMY
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
+F+++ DA VF GI KD+ SW S+IA FS+LG+E EAL H EML G + PNE+IFG
Sbjct: 215 RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 243 SVFSACS----------------------------------------NFARILFNEIDSP 262
S ACS N AR +F++I+ P
Sbjct: 275 SSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP 334
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D ASWN +IAG+A++ A+EA+S+FS+MR +PD +++ SLLCA + L QGMQ+H
Sbjct: 335 DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIH 394
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
SYIIK GF +++ VCN++LTMY CS L +F++ NADSVSWN+I+ ACLQH Q
Sbjct: 395 SYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQP 454
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
E+ RLF ML S+ +PDHIT +++ C +++SL++ +Q+HCY KTGLA + F+ NGL
Sbjct: 455 VEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGL 514
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y KCGSLG AR++F+ M+N DVVSWS+LI+GYAQ G G+EAL LF M+S G+ PN
Sbjct: 515 IDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNH 574
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
VT VGVLTACSHVGLVEEGL LY M+ E+GI PT+EHCSCVVDLLARAG ++EAE FI+
Sbjct: 575 VTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFID 634
Query: 563 QMACDADIVVWKSLLAS 579
+M + D+VVWK+LL++
Sbjct: 635 EMKLEPDVVVWKTLLSA 651
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 168/381 (44%), Gaps = 43/381 (11%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+ + ACSSL G ++H + S+ + + + +MY +CG L AR FD++
Sbjct: 273 FGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE 332
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+ + SW +IAG + N ++A+ ++ QM SG +P + S++ A + ++ G Q
Sbjct: 333 RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQ 392
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK-DVTSWGSMIAAFSKLG 216
+H+++IK + L N+L+ MYT + N+F D SW +++ A +
Sbjct: 393 IHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHE 452
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
+E L F ML +P+ G++ C
Sbjct: 453 QPVEMLRLFKLMLV-SECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIK 511
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR +F+ +D+ D+ SW+ LI G A EA+ LF EM+ +
Sbjct: 512 NGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIE 571
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ +T +L AC + +G+++++ + + G C+ ++ + A+ L A
Sbjct: 572 PNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAER 631
Query: 356 VFKELGKNADSVSWNSIIAAC 376
E+ D V W ++++AC
Sbjct: 632 FIDEMKLEPDVVVWKTLLSAC 652
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 325 bits (832), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 190/607 (31%), Positives = 310/607 (51%), Gaps = 61/607 (10%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I T+A ++ CS L LG ++H ++ C DVV + +L+MY K ++
Sbjct: 176 IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESL 235
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F +P++N VSW+A+IAGC QN + A+K + +M + Q + S++++C+ L
Sbjct: 236 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 295
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ LG QLHAH +KS+ + I + A + MY K D + DA+ +F + S+ +MI
Sbjct: 296 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 355
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------- 254
+S+ + +AL F+ ++ G +E VF AC+ +
Sbjct: 356 GYSQEEHGFKALLLFHRLMSSG-LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLS 414
Query: 255 ------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+F+E+ D SWNA+IA + E + LF M
Sbjct: 415 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 474
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ PD T S+L AC G +L GM++HS I+K G SN V +++ MY+KC ++
Sbjct: 475 LRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMI 533
Query: 351 CNALLVFKELGKNADS-------------------VSWNSIIAACLQHNQAEELFRLFSR 391
A + + A+ VSWNSII+ + Q+E+ LF+R
Sbjct: 534 EEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTR 593
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M+ I PD T+ V+ CA +AS + Q+H + K L DV++ + L+D+Y KCG
Sbjct: 594 MMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGD 653
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
L +R +F D V+W+++I GYA G G+EA++LF RM + PN VT + +L A
Sbjct: 654 LHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRA 713
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
C+H+GL+++GL + +M+ +YG+ P H S +VD+L ++G V A + I +M +AD V
Sbjct: 714 CAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV 773
Query: 572 VWKSLLA 578
+W++LL
Sbjct: 774 IWRTLLG 780
Score = 242 bits (618), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 177/639 (27%), Positives = 303/639 (47%), Gaps = 102/639 (15%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQP------------------------ 68
+ + ++ + C+ +L+LG++ H H+++S +P
Sbjct: 46 VSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMV 105
Query: 69 -------DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
DVV N ++N Y K + A F+ MP R+VVSW +M++G QN + +I
Sbjct: 106 FDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSI 165
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
++++ M + G+ TF I+K CS L LG Q+H V++ + ++A +AL+ MY
Sbjct: 166 EVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMY 225
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM--LHHGAYQPNEF 239
K R +++ VF GI K+ SW ++IA + AL F EM ++ G Q
Sbjct: 226 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS--- 282
Query: 240 IFGSVFSAC------------------SNF----------------------ARILFNEI 259
I+ SV +C S+F A+ILF+
Sbjct: 283 IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNS 342
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
++ + S+NA+I G + + +A+ LF + L D +++ + AC L +G+
Sbjct: 343 ENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL 402
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
Q++ IK +V V NA + MY KC L A VF E+ + D+VSWN+IIAA Q+
Sbjct: 403 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM-RRRDAVSWNAIIAAHEQN 461
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+ E LF ML S+I+PD TF ++ AC SL ++H I K+G+A + V
Sbjct: 462 GKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVG 520
Query: 440 NGLMDIYIKCGSLGSARKLFN-FMENPDV-------------------VSWSSLILGYAQ 479
L+D+Y KCG + A K+ + F + +V VSW+S+I GY
Sbjct: 521 CSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVM 580
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY-RIMENEYGIIPTR 538
++A LFTRM +G++P+ T VL C+++ G ++ ++++ E +
Sbjct: 581 KEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE--LQSDV 638
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
CS +VD+ ++ G +H++ + + + D V W +++
Sbjct: 639 YICSTLVDMYSKCGDLHDSR-LMFEKSLRRDFVTWNAMI 676
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 217/445 (48%), Gaps = 42/445 (9%)
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIA 198
F + K C+ G++ LG+Q HAH+I S N L+ +YT + A VF +
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 199 RKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE 258
+DV SW MI +SK N+M ++ N F FN
Sbjct: 111 LRDVVSWNKMINGYSKS----------NDM-----FKANSF----------------FNM 139
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
+ D+ SWN++++G + + +++ +F +M + DG T +L C G
Sbjct: 140 MPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLG 199
Query: 319 MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ 378
MQ+H ++++G D++V +A+L MYAK +L VF+ + + +SVSW++IIA C+Q
Sbjct: 200 MQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK-NSVSWSAIIAGCVQ 258
Query: 379 HNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV 438
+N + F M + V+ +CA ++ L + QLH + K+ A D V
Sbjct: 259 NNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIV 318
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV 498
+D+Y KC ++ A+ LF+ EN + S++++I GY+Q G +AL LF R+ S G+
Sbjct: 319 RTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGL 378
Query: 499 SPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV----VDLLARAGCV 554
+ ++L GV AC+ V + EGL +Y + I + CV +D+ + +
Sbjct: 379 GFDEISLSGVFRACALVKGLSEGLQIYGL-----AIKSSLSLDVCVANAAIDMYGKCQAL 433
Query: 555 HEAEDFINQMACDADIVVWKSLLAS 579
EA ++M D V W +++A+
Sbjct: 434 AEAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 194/411 (47%), Gaps = 65/411 (15%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+ +G+ AC+ ++ L G +++ + S DV + N ++MYGKC +L +A FD+M
Sbjct: 384 SLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM 443
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R+ VSW A+IA QN + + + L++ ML+S + P +FTFGSI+KAC+G GS+ G
Sbjct: 444 RRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGM 502
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI-ARKDVT------------ 203
++H+ ++KS S+ +LI MY+K I +A + S R +V+
Sbjct: 503 EIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNK 562
Query: 204 -------SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA---- 252
SW S+I+ + +A F M+ G P++F + +V C+N A
Sbjct: 563 RLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGI-TPDKFTYATVLDTCANLASAGL 621
Query: 253 ------------------------------------RILFNEIDSPDLASWNALIAGVAS 276
R++F + D +WNA+I G A
Sbjct: 622 GKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAH 681
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK--MGFDSNV 334
H EA+ LF M + P+ +T S+L AC + +G++ + Y++K G D +
Sbjct: 682 HGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQL 740
Query: 335 PVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL 385
P + ++ + K + AL + +E+ AD V W +++ C H E+
Sbjct: 741 PHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEV 791
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 324 bits (830), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 193/617 (31%), Positives = 319/617 (51%), Gaps = 48/617 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N + + K L+ EAL +F ++ P T+ +I AC+ L ++G V++
Sbjct: 75 NSIIRAFSKNGLFPEAL---EFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
IL + D+ + N +++MY + G L AR FD+MP R++VSW ++I+G S + +A
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+++Y ++ S ++P FT S++ A L V G+ LH +KS S ++ N L+AM
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y KF R DAR VF + +D S+ +MI + KL E++ F E L ++P+
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ--FKPDLLT 309
Query: 241 FGSVFSACSNF----------------------------------------ARILFNEID 260
SV AC + AR +FN ++
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
D SWN++I+G + EAM LF M E D +T L+ L G
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG 429
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
+HS IK G ++ V NA++ MYAKC + ++L +F +G D+V+WN++I+AC++
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACVRFG 488
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
++ ++M S++ PD TF + CA +A+ + ++HC + + G ++ + N
Sbjct: 489 DFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGN 548
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+++Y KCG L ++ ++F M DVV+W+ +I Y +G G++AL+ F M G+ P
Sbjct: 549 ALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 608
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
+ V + ++ ACSH GLV+EGL + M+ Y I P EH +CVVDLL+R+ + +AE+F
Sbjct: 609 DSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 668
Query: 561 INQMACDADIVVWKSLL 577
I M D +W S+L
Sbjct: 669 IQAMPIKPDASIWASVL 685
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 148/521 (28%), Positives = 256/521 (49%), Gaps = 45/521 (8%)
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P +NV W ++I S+N +A++ Y ++ +S V P ++TF S+IKAC+GL +G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
++ ++ S L NAL+ MY++ + AR VF + +D+ SW S+I+ +S G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------- 251
Y EAL ++E L + P+ F SV A N
Sbjct: 187 YYEEALEIYHE-LKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
AR +F+E+D D S+N +I G E++ +F E D +
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFK 304
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
PD LTV S+L AC L +++Y++K GF V N ++ +YAKC + A V
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F + + D+VSWNSII+ +Q E +LF M+ + + DHIT+ ++ ++A
Sbjct: 365 FNSM-ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L+ LH K+G+ D+ V N L+D+Y KCG +G + K+F+ M D V+W+++I
Sbjct: 424 LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISA 483
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
+FG L++ T+MR V P++ T + L C+ + G ++ + +G
Sbjct: 484 CVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYES 542
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ + ++++ ++ GC+ + +M+ D+V W ++
Sbjct: 543 ELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMI 582
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 167/313 (53%), Gaps = 6/313 (1%)
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WN++I + + EA+ + ++R+ ++ PD T S++ AC G G V+ I+
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
MGF+S++ V NA++ MY++ +L A VF E+ D VSWNS+I+ H EE
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYSSHGYYEEAL 192
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
++ + S I PD T + V+ A + ++ LH + K+G+ V V NGL+ +Y
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMY 252
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNLVTL 505
+K AR++F+ M+ D VS++++I GY + +E++++F + +L P+L+T+
Sbjct: 253 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPDLLTV 310
Query: 506 VGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
VL AC H+ + ++Y M G + + ++D+ A+ G + A D N M
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKA-GFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 566 CDADIVVWKSLLA 578
C D V W S+++
Sbjct: 370 C-KDTVSWNSIIS 381
Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 114/206 (55%)
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
++H+ +I +G DS+ ++ Y+ ++L VF+ + + WNSII A ++
Sbjct: 25 RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKN 84
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
E + ++ S++ PD TF V+ ACA + EM ++ I G D+FV
Sbjct: 85 GLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVG 144
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
N L+D+Y + G L AR++F+ M D+VSW+SLI GY+ G +EAL+++ +++ +
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIV 204
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLY 525
P+ T+ VL A ++ +V++G L+
Sbjct: 205 PDSFTVSSVLPAFGNLLVVKQGQGLH 230
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 319 bits (817), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 191/623 (30%), Positives = 336/623 (53%), Gaps = 58/623 (9%)
Query: 6 VSSLCKQNLYNEALVAY-DFSQNNTNIRIRPSTY--AGLISACSSL--RSLQLGRKVHDH 60
VS+ +Y E+LV + +F + + P+ Y + I ACS L R + ++
Sbjct: 117 VSACNHHGIYEESLVVFLEFWRTRKD---SPNEYILSSFIQACSGLDGRGRWMVFQLQSF 173
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
++ S DV + +++ Y K G+++ AR+ FD +P+++ V+WT MI+GC + + +
Sbjct: 174 LVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVS 233
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ--NALI 178
++L+ Q+++ V+P + +++ ACS L + G+Q+HAH+++ +G + A N LI
Sbjct: 234 LQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR--YGLEMDASLMNVLI 291
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
Y K R++ A +F+G+ K++ SW ++++ + + EA+ F M G +P+
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG-LKPDM 350
Query: 239 FIFGSVFSACSNF----------------------------------------ARILFNE 258
+ S+ ++C++ AR +F+
Sbjct: 351 YACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDI 410
Query: 259 IDSPDLASWNALIAG---VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
+ D+ +NA+I G + + +EA+++F +MR R + P LT SLL A +L
Sbjct: 411 FAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSL 470
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
Q+H + K G + ++ +A++ +Y+ C L ++ LVF E+ K D V WNS+ A
Sbjct: 471 GLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM-KVKDLVIWNSMFAG 529
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
+Q ++ EE LF + S+ +PD TF +++ A +AS+++ + HC + K GL +
Sbjct: 530 YVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECN 589
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
++ N L+D+Y KCGS A K F+ + DVV W+S+I YA G G +AL++ +M S
Sbjct: 590 PYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMS 649
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
G+ PN +T VGVL+ACSH GLVE+GL + +M +GI P EH C+V LL RAG ++
Sbjct: 650 EGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLN 708
Query: 556 EAEDFINQMACDADIVVWKSLLA 578
+A + I +M +VW+SLL+
Sbjct: 709 KARELIEKMPTKPAAIVWRSLLS 731
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 170/610 (27%), Positives = 288/610 (47%), Gaps = 58/610 (9%)
Query: 19 LVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILN 78
V DF + IR R +A L+ +S L VH I++ + D L N ++N
Sbjct: 30 FVNADFP-STIGIRGR-REFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILIN 87
Query: 79 MYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV-MPGQF 137
+Y + G + AR F+KMP+RN+VSW+ M++ C+ + +++ ++++ ++ P ++
Sbjct: 88 LYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEY 147
Query: 138 TFGSIIKACSGLGSVCLGR----QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
S I+ACSGL GR QL + ++KS + LI Y K I AR V
Sbjct: 148 ILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLV 205
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-- 251
F + K +W +MI+ K+G +L F +++ P+ +I +V SACS
Sbjct: 206 FDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVV-PDGYILSTVLSACSILPF 264
Query: 252 --------------------------------------ARILFNEIDSPDLASWNALIAG 273
A LFN + + ++ SW L++G
Sbjct: 265 LEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSG 324
Query: 274 VASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSN 333
++ EAM LF+ M L PD S+L +C L G QVH+Y IK ++
Sbjct: 325 YKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGND 384
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEEL---FRLFS 390
V N+++ MYAKC L +A VF ++ AD V +N++I + EL +F
Sbjct: 385 SYVTNSLIDMYAKCDCLTDARKVF-DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
M I+P +TF ++ A A + SL + Q+H + K GL D+F + L+D+Y C
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
L +R +F+ M+ D+V W+S+ GY Q +EAL LF ++ P+ T ++T
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 511 ACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
A ++ V+ G + ++++ G+ + ++D+ A+ G +A + A D
Sbjct: 564 AAGNLASVQLGQEFHCQLLKR--GLECNPYITNALLDMYAKCGSPEDAHKAFDS-AASRD 620
Query: 570 IVVWKSLLAS 579
+V W S+++S
Sbjct: 621 VVCWNSVISS 630
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 191/419 (45%), Gaps = 50/419 (11%)
Query: 11 KQN-LYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQ 67
KQN L+ EA+ + + + ++P YA ++++C+SL +L G +VH + + +
Sbjct: 326 KQNALHKEAM---ELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLG 382
Query: 68 PDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ---NYQENDAIKLY 124
D + N +++MY KC L DAR FD +VV + AMI G S+ ++ ++A+ ++
Sbjct: 383 NDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIF 442
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
M + P TF S+++A + L S+ L +Q+H + K + A +ALI +Y+
Sbjct: 443 RDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNC 502
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
+ D+R VF + KD+ W SM A + + EAL F E L +P+EF F ++
Sbjct: 503 YCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLE-LQLSRERPDEFTFANM 561
Query: 245 FSACSNFARI----------------------------------------LFNEIDSPDL 264
+A N A + F+ S D+
Sbjct: 562 VTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDV 621
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSY 324
WN++I+ A+H +A+ + +M + P+ +T +L AC + G++
Sbjct: 622 VCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFEL 681
Query: 325 IIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+++ G + ++++ + L A + +++ ++ W S+++ C + E
Sbjct: 682 MLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVE 740
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 311 bits (797), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 192/598 (32%), Positives = 315/598 (52%), Gaps = 53/598 (8%)
Query: 33 IRP---STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
IRP T++ L+ +C R +LG+ VH ++ +PD VL N ++++Y K G A
Sbjct: 57 IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKA 116
Query: 90 RMGFDKMP---QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
F+ M +R+VVSW+AM+A N +E DAIK++++ L+ G++P + + ++I+AC
Sbjct: 117 EDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRAC 176
Query: 147 SGLGSVCLGRQLHAHVIKSEH-GSHLIAQNALIAMYTKFDRILD-ARNVFSGIARKDVTS 204
S V +GR ++K+ H S + +LI M+ K + + A VF ++ +V +
Sbjct: 177 SNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVT 236
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA------------ 252
W MI ++G+ EA+ F +M+ G ++ ++F SVFSAC+
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSG-FESDKFTLSSVFSACAELENLSLGKQLHSWA 295
Query: 253 -----------------------------RILFNEIDSPDLASWNALIAGVASHSN-ANE 282
R +F+ ++ + SW ALI G + N A E
Sbjct: 296 IRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATE 355
Query: 283 AMSLFSEMRDR-ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
A++LFSEM + + P+ T S AC G QV K G SN V N+++
Sbjct: 356 AINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVI 415
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+M+ K + +A F+ L + + VS+N+ + ++ E+ F+L S + ++
Sbjct: 416 SMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSA 474
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
TF ++ A + S+ Q+H + K GL+ + V N L+ +Y KCGS+ +A ++FNF
Sbjct: 475 FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNF 534
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
MEN +V+SW+S+I G+A+ G L+ F +M GV PN VT V +L+ACSHVGLV EG
Sbjct: 535 MENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEG 594
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ M ++ I P EH +C+VDLL RAG + +A +FIN M AD++VW++ L +
Sbjct: 595 WRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 179/394 (45%), Gaps = 51/394 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC---GSLEDARMGF 93
T + + SAC+ L +L LG+++H + S DV + +++MY KC GS++D R F
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVF 328
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQ-ENDAIKLYIQMLQSG-VMPGQFTFGSIIKACSGLGS 151
D+M +V+SWTA+I G +N +AI L+ +M+ G V P FTF S KAC L
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+G+Q+ K S+ N++I+M+ K DR+ DA+ F ++ K++ S+ + +
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 448
Query: 212 FSK-LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------- 254
+ L +E +A +E+ + F F S+ S +N I
Sbjct: 449 TCRNLNFE-QAFKLLSEITER-ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLS 506
Query: 255 ------------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+FN +++ ++ SW ++I G A H A + F++M
Sbjct: 507 CNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQM 566
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
+ + P+ +T ++L AC + +G + +S + ++ + + +
Sbjct: 567 IEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGL 626
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L +A + AD + W + + AC H+ E
Sbjct: 627 LTDAFEFINTMPFQADVLVWRTFLGACRVHSNTE 660
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 128/240 (53%), Gaps = 5/240 (2%)
Query: 13 NLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
NL EA+ FS+ T + P+ T++ AC +L ++G++V +
Sbjct: 351 NLATEAINL--FSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 408
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ N +++M+ K +EDA+ F+ + ++N+VS+ + G +N A KL ++ +
Sbjct: 409 SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
+ FTF S++ + +GS+ G Q+H+ V+K + NALI+MY+K I A
Sbjct: 469 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
VF+ + ++V SW SMI F+K G+ + L FN+M+ G +PNE + ++ SACS+
Sbjct: 529 SRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGV-KPNEVTYVAILSACSH 587
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 311 bits (797), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 181/585 (30%), Positives = 302/585 (51%), Gaps = 42/585 (7%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P ++ ++SAC + SL++G ++H +L D + N ++++Y G+L A F
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 347
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
M QR+ V++ +I G SQ A++L+ +M G+ P T S++ ACS G++
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 155 GRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSK 214
G+QLHA+ K S+ + AL+ +Y K I A + F ++V W M+ A+
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE---------------- 258
L + F +M PN++ + S+ C + E
Sbjct: 468 LDDLRNSFRIFRQM-QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY 526
Query: 259 -----ID-------------------SPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
ID D+ SW +IAG ++ ++A++ F +M DR
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ D + + + + AC G L +G Q+H+ GF S++P NA++T+Y++C + +
Sbjct: 587 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 646
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
L F E + D+++WN++++ Q EE R+F RM I ++ TF + A ++
Sbjct: 647 LAF-EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 705
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
A+++ Q+H ITKTG + V N L+ +Y KCGS+ A K F + + VSW+++I
Sbjct: 706 ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 765
Query: 475 LGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGI 534
Y++ G G EAL F +M V PN VTLVGVL+ACSH+GLV++G+ + M +EYG+
Sbjct: 766 NAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGL 825
Query: 535 IPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P EH CVVD+L RAG + A++FI +M D +VW++LL++
Sbjct: 826 SPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
Score = 248 bits (634), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 173/599 (28%), Positives = 278/599 (46%), Gaps = 52/599 (8%)
Query: 25 SQNNTNIRIRPSTYAGLISAC-SSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
S N IR T L+ C + SL GRK+H IL + L + + Y
Sbjct: 74 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 133
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G L A FD+MP+R + +W MI + + L+++M+ V P + TF ++
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 144 KACSGLGSVCLG--RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
+AC G GSV Q+HA ++ + N LI +Y++ + AR VF G+ KD
Sbjct: 194 EACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 252
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------- 251
+SW +MI+ SK E EA+ F +M G P + F SV SAC
Sbjct: 253 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGI-MPTPYAFSSVLSACKKIESLEIGEQLH 311
Query: 252 ------------------------------ARILFNEIDSPDLASWNALIAGVASHSNAN 281
A +F+ + D ++N LI G++
Sbjct: 312 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
+AM LF M L PD T+ SL+ AC TL++G Q+H+Y K+GF SN + A+L
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL 431
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+YAKC+ + AL F E + + V WN ++ A + FR+F +M +I P+
Sbjct: 432 NLYAKCADIETALDYFLET-EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
T+ ++ C ++ LE+ Q+H I KT + +V + L+D+Y K G L +A +
Sbjct: 491 YTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 550
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
DVVSW+++I GY Q+ D+AL F +M G+ + V L ++AC+ + ++EG
Sbjct: 551 FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 610
Query: 522 --LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+H + +P + + +V L +R G + E+ Q D + W +L++
Sbjct: 611 QQIHAQACVSGFSSDLPFQ---NALVTLYSRCGKIEESYLAFEQTEA-GDNIAWNALVS 665
Score = 246 bits (629), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 158/617 (25%), Positives = 294/617 (47%), Gaps = 48/617 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLR-SLQLGRKVHDHI 61
N + L +NL E + + N+ T++G++ AC + + ++H I
Sbjct: 155 NKMIKELASRNLIGEVFGLF-VRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARI 213
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
L + V+ N ++++Y + G ++ AR FD + ++ SW AMI+G S+N E +AI
Sbjct: 214 LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAI 273
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+L+ M G+MP + F S++ AC + S+ +G QLH V+K S NAL+++Y
Sbjct: 274 RLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLY 333
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
++ A ++FS ++++D ++ ++I S+ GY +A+ F M H +P+
Sbjct: 334 FHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM-HLDGLEPDSNTL 392
Query: 242 GSVFSACSNFARIL----------------------------------------FNEIDS 261
S+ ACS + F E +
Sbjct: 393 ASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV 452
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
++ WN ++ + + +F +M+ E++P+ T S+L CI L G Q+
Sbjct: 453 ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQI 512
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL-LVFKELGKNADSVSWNSIIAACLQHN 380
HS IIK F N VC+ ++ MYAK L A ++ + GK D VSW ++IA Q+N
Sbjct: 513 HSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK--DVVSWTTMIAGYTQYN 570
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
++ F +ML I+ D + + + ACA + +L+ Q+H +G + D+ N
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN 630
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+ +Y +CG + + F E D ++W++L+ G+ Q G +EAL++F RM G+
Sbjct: 631 ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN 690
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF 560
N T + A S +++G ++ ++ + G E C+ ++ + A+ G + +AE
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVHAVI-TKTGYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 561 INQMACDADIVVWKSLL 577
+++ + V W +++
Sbjct: 750 FLEVSTKNE-VSWNAII 765
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 150/279 (53%), Gaps = 14/279 (5%)
Query: 42 ISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNV 101
+SAC+ L++L+ G+++H +S D+ QN ++ +Y +CG +E++ + F++ +
Sbjct: 598 VSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN 657
Query: 102 VSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAH 161
++W A+++G Q+ +A++++++M + G+ FTFGS +KA S ++ G+Q+HA
Sbjct: 658 IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAV 717
Query: 162 VIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
+ K+ + S NALI+MY K I DA F ++ K+ SW ++I A+SK G+ EA
Sbjct: 718 ITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEA 777
Query: 222 LCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEID-----SPDLASWNALI 271
L F++M+H +PN V SACS+ + F ++ SP + ++
Sbjct: 778 LDSFDQMIHSNV-RPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVV 836
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+ + A EM + PD L +LL AC+
Sbjct: 837 DMLTRAGLLSRAKEFIQEM---PIKPDALVWRTLLSACV 872
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 187/423 (44%), Gaps = 54/423 (12%)
Query: 14 LYNEALVAY---DFSQNNTNI-------RIRPS--TYAGLISACSSLRSLQLGRKVHDHI 61
L+N LVAY D +N+ I I P+ TY ++ C L L+LG ++H I
Sbjct: 457 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ + Q + + + +++MY K G L+ A + ++VVSWT MIAG +Q ++ A+
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
+ QML G+ + + + AC+GL ++ G+Q+HA S S L QNAL+ +Y
Sbjct: 577 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 636
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
++ +I ++ F D +W ++++ F + G EAL F M G N F F
Sbjct: 637 SRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI-DNNNFTF 695
Query: 242 GSVFSACSNFARI----------------------------------------LFNEIDS 261
GS A S A + F E+ +
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ- 320
+ SWNA+I + H +EA+ F +M + P+ +T+ +L AC + +G+
Sbjct: 756 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 815
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
S + G ++ M + +L A +E+ D++ W ++++AC+ H
Sbjct: 816 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 875
Query: 381 QAE 383
E
Sbjct: 876 NME 878
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%)
Query: 11 KQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV 70
+Q+ NE + N I T+ + A S +++ G++VH I + +
Sbjct: 668 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 727
Query: 71 VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+ N +++MY KCGS+ DA F ++ +N VSW A+I S++ ++A+ + QM+ S
Sbjct: 728 EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHS 787
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLG 155
V P T ++ ACS +G V G
Sbjct: 788 NVRPNHVTLVGVLSACSHIGLVDKG 812
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 310 bits (793), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 191/589 (32%), Positives = 301/589 (51%), Gaps = 49/589 (8%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKC--QPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+ L+ C R+L LG+ +H H+L VL N + +Y C +E AR FD+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDE 60
Query: 96 MPQR--NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
+P N ++W MI + N A+ LY +ML SGV P ++T+ ++KAC+GL ++
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
G+ +H+HV S+ + + AL+ Y K + A VF + ++D+ +W +MI+ FS
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA-------------------------- 247
+ + F +M PN +F A
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 248 --------------CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM--R 291
C +AR +F+ + +W+A+I G + EA +F +M
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
D + + + +L C L G VH Y +K GF ++ V N I++ YAK LC
Sbjct: 301 DNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLC 360
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A F E+G D +S+NS+I C+ + + EE FRLF M S I+PD T V+ AC
Sbjct: 361 DAFRQFSEIGLK-DVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTAC 419
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ +A+L + H Y G A + + N LMD+Y KCG L A+++F+ M D+VSW+
Sbjct: 420 SHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWN 479
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM-EN 530
+++ G+ G G EAL LF M+ GV+P+ VTL+ +L+ACSH GLV+EG L+ M
Sbjct: 480 TMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRG 539
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
++ +IP +H +C+ DLLARAG + EA DF+N+M + DI V +LL++
Sbjct: 540 DFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSA 588
Score = 185 bits (470), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 149/577 (25%), Positives = 253/577 (43%), Gaps = 61/577 (10%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
N + E + + N+ +R TY ++ AC+ LR++ G+ +H H+ S D+
Sbjct: 80 SNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMY 139
Query: 72 LQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ-S 130
+ +++ Y KCG LE A FD+MP+R++V+W AMI+G S + D I L++ M +
Sbjct: 140 VCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRID 199
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G+ P T + A G++ G+ +H + + + L+ + ++ +Y K I+ A
Sbjct: 200 GLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYA 259
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML-HHGAYQPNEFIFGSVFSACS 249
R VF +K+ +W +MI + + EA F +ML + G + C+
Sbjct: 260 RRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCA 319
Query: 250 NFARI----------------------------------------LFNEIDSPDLASWNA 269
F + F+EI D+ S+N+
Sbjct: 320 RFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNS 379
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
LI G + E+ LF EMR + PD T+ +L AC L G H Y + G
Sbjct: 380 LITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHG 439
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLF 389
+ N +CNA++ MY KC L A VF + K D VSWN+++ H +E LF
Sbjct: 440 YAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKR-DIVSWNTMLFGFGIHGLGKEALSLF 498
Query: 390 SRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFV----MNGLMDI 445
+ M + + PD +T ++ AC+ ++ QL +++ F+V N + D+
Sbjct: 499 NSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGD--FNVIPRIDHYNCMTDL 556
Query: 446 YIKCGSLGSARKLFNFME-NPDVVSWSSLILG---YAQFGCGDEALKLFTRMRSLG-VSP 500
+ G L A N M PD+ +L+ Y G+E K +M+SLG +
Sbjct: 557 LARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSK---KMQSLGETTE 613
Query: 501 NLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
+LV L +A E R+++ + G++ T
Sbjct: 614 SLVLLSNTYSAAER----WEDAARIRMIQKKRGLLKT 646
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 306 bits (784), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 193/588 (32%), Positives = 302/588 (51%), Gaps = 47/588 (7%)
Query: 33 IRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
I P T ++ C+ +SL+ G++V + I + D L + + MY CG L++A
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FD++ + W ++ +++ + +I L+ +M+ SGV +TF + K+ S L SV
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G QLH ++KS G N+L+A Y K R+ AR VF + +DV SW S+I +
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------- 251
G + L F +ML G + + SVF+ C++
Sbjct: 272 VSNGLAEKGLSVFVQMLVSG-IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 252 -------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
A+ +F E+ + S+ ++IAG A A EA+ LF EM +
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK--MGFDSNVPVCNAILTMYAKCSVL 350
+ PD TV ++L C L +G +VH +I + +GFD + V NA++ MYAKC +
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD--IFVSNALMDMYAKCGSM 448
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ-IKPDHITFNDVMG 409
A LVF E+ + D +SWN+II ++ A E LF+ +L + PD T V+
Sbjct: 449 QEAELVFSEM-RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
ACA +++ + ++H YI + G D V N L+D+Y KCG+L A LF+ + + D+VS
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 567
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+ +I GY G G EA+ LF +MR G+ + ++ V +L ACSH GLV+EG + IM
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+E I PT EH +C+VD+LAR G + +A FI M D +W +LL
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALL 675
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 209/446 (46%), Gaps = 44/446 (9%)
Query: 29 TNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLED 88
+ I I +T + + C+ R + LGR VH + + + N +L+MY KCG L+
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDS 349
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
A+ F +M R+VVS+T+MIAG ++ +A+KL+ +M + G+ P +T +++ C+
Sbjct: 350 AKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR 409
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+ G+++H + +++ G + NAL+ MY K + +A VFS + KD+ SW ++
Sbjct: 410 YRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTI 469
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------------ 250
I +SK Y EAL FN +L + P+E V AC++
Sbjct: 470 IGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 529
Query: 251 ----------------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
A +LF++I S DL SW +IAG H EA++LF+
Sbjct: 530 YFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFN 589
Query: 289 EMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII-KMGFDSNVPVCNAILTMYAKC 347
+MR + D ++ SLL AC + +G + + + + + V I+ M A+
Sbjct: 590 QMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLART 649
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
L A + + D+ W +++ C H+ + ++ ++ +++P++ + +
Sbjct: 650 GDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVF--ELEPENTGYYVL 707
Query: 408 MGAC-AKMASLEMVTQLHCYITKTGL 432
M A+ E V +L I + GL
Sbjct: 708 MANIYAEAEKWEQVKRLRKRIGQRGL 733
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 160/317 (50%), Gaps = 20/317 (6%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHILL 63
++ ++ L EA+ ++ + I P Y +++ C+ R L G++VH+ I
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEG---ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
+ D+ + N +++MY KCGS+++A + F +M ++++SW +I G S+N N+A+ L
Sbjct: 426 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSL 485
Query: 124 YIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ +L+ P + T ++ AC+ L + GR++H +++++ + S N+L+ MY
Sbjct: 486 FNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 545
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K +L A +F IA KD+ SW MIA + G+ EA+ FN+M G + +E F
Sbjct: 546 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG-IEADEISFV 604
Query: 243 SVFSACSN---------FARILFNEID-SPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
S+ ACS+ F I+ +E P + + ++ +A + +A M
Sbjct: 605 SLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM-- 662
Query: 293 RELLPDGLTVHSLLCAC 309
+ PD +LLC C
Sbjct: 663 -PIPPDATIWGALLCGC 678
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 81/153 (52%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + K NEAL ++ T A ++ AC+SL + GR++H +I+
Sbjct: 467 NTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIM 526
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D + N +++MY KCG+L A M FD + +++VSWT MIAG + +AI
Sbjct: 527 RNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIA 586
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
L+ QM Q+G+ + +F S++ ACS G V G
Sbjct: 587 LFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 304 bits (779), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 189/637 (29%), Positives = 327/637 (51%), Gaps = 68/637 (10%)
Query: 4 DYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYA--GLISACSSLRSLQLGRKVHDHI 61
D + S + NL EA++ Y + + I+P YA L+ A + L+ ++LG+++H H+
Sbjct: 67 DLLRSKVRSNLLREAVLTY---VDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 62 LLSKCQPD-VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
D V + N ++N+Y KCG FD++ +RN VSW ++I+ + A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLG---SVCLGRQLHAHVI-KSEHGSHLIAQNA 176
++ + ML V P FT S++ ACS L + +G+Q+HA+ + K E S +I N
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NT 241
Query: 177 LIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQP 236
L+AMY K ++ ++ + +D+ +W +++++ + LEAL + EM+ G +P
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV-EP 300
Query: 237 NEFIFGSVFSACSNF-----------------------------------------ARIL 255
+EF SV ACS+ R +
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE-LLPDGLTVHSLLCACIGRLT 314
F+ + + WNA+IAG + + + EA+ LF M + LL + T+ ++ AC+
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 315 LYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIA 374
+ +H +++K G D + V N ++ MY++ + A+ +F ++ ++ D V+WN++I
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNTMIT 479
Query: 375 ACLQHNQAEELFRLFSRML---------ASQI--KPDHITFNDVMGACAKMASLEMVTQL 423
+ E+ L +M AS++ KP+ IT ++ +CA +++L ++
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H Y K LA DV V + L+D+Y KCG L +RK+F+ + +V++W+ +I+ Y G G
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSC 543
EA+ L M GV PN VT + V ACSH G+V+EGL ++ +M+ +YG+ P+ +H +C
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIV-VWKSLLAS 579
VVDLL RAG + EA +N M D + W SLL +
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 137/536 (25%), Positives = 244/536 (45%), Gaps = 72/536 (13%)
Query: 104 WTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI 163
W ++ ++ +A+ Y+ M+ G+ P + F +++KA + L + LG+Q+HAHV
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 164 KSEHG-SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA---AFSKLGYEL 219
K +G + N L+ +Y K VF I+ ++ SW S+I+ +F K L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 220 EAL-CHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------------- 251
EA C +E + +P+ F SV +ACSN
Sbjct: 185 EAFRCMLDENV-----EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII 239
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+++L DL +WN +++ + + EA+ EM +
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALL 355
PD T+ S+L AC L G ++H+Y +K G D N V +A++ MY C + +
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ-IKPDHITFNDVMGACAKM 414
VF + + WN++IA Q+ +E LF M S + + T V+ AC +
Sbjct: 360 VFDGMFDRKIGL-WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRS 418
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+ +H ++ K GL D FV N LMD+Y + G + A ++F ME+ D+V+W+++I
Sbjct: 419 GAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMI 478
Query: 475 LGYAQFGCGDEALKLFTRMRSL-----------GVSPNLVTLVGVLTACSHVGLVEEG-- 521
GY ++AL L +M++L + PN +TL+ +L +C+ + + +G
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+H Y I N + S +VD+ A+ GC+ + +Q+ +++ W ++
Sbjct: 539 IHAYAIKNNLATDVAV---GSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVII 590
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 251/531 (47%), Gaps = 63/531 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSL---RSLQLGRKVHD 59
N +SSLC + AL A+ + N+ T +++ACS+L L +G++VH
Sbjct: 168 NSLISSLCSFEKWEMALEAFR-CMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA 226
Query: 60 HILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
+ L K + + + N ++ MYGK G L +++ R++V+W +++ QN Q +
Sbjct: 227 YGL-RKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLE 285
Query: 120 AIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEH-GSHLIAQNALI 178
A++ +M+ GV P +FT S++ ACS L + G++LHA+ +K+ + +AL+
Sbjct: 286 ALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALV 345
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM---------- 228
MY ++L R VF G+ + + W +MIA +S+ ++ EAL F M
Sbjct: 346 DMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANS 405
Query: 229 ----------LHHGAYQPNEFIFG---------------SVFSACSNFARI-----LFNE 258
+ GA+ E I G ++ S +I +F +
Sbjct: 406 TTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGK 465
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE-----------LLPDGLTVHSLLC 307
++ DL +WN +I G + +A+ L +M++ E L P+ +T+ ++L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
+C L +G ++H+Y IK ++V V +A++ MYAKC L + VF ++ + + +
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVI 584
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
+WN II A H +E L M+ +KP+ +TF V AC+ ++ ++ Y+
Sbjct: 585 TWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YV 643
Query: 428 TKT--GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP--DVVSWSSLI 474
K G+ ++D+ + G + A +L N M +WSSL+
Sbjct: 644 MKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 10/288 (3%)
Query: 244 VFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVH 303
V SA S I ++ SP+ W L+ + EA+ + +M + PD
Sbjct: 44 VASAVSGAPSIFISQSRSPEW--WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFP 101
Query: 304 SLLCACIGRLTLYQGMQVHSYIIKMGFD-SNVPVCNAILTMYAKCSVLCNALLVFKELGK 362
+LL A + G Q+H+++ K G+ +V V N ++ +Y KC VF + +
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE 161
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE---M 419
+ VSWNS+I++ + E F ML ++P T V+ AC+ + E M
Sbjct: 162 R-NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMM 220
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
Q+H Y + G + F++N L+ +Y K G L S++ L D+V+W++++ Q
Sbjct: 221 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLY 525
EAL+ M GV P+ T+ VL ACSH+ ++ G LH Y
Sbjct: 280 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAY 327
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 15/219 (6%)
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
W ++ + ++ N E + M+ IKPD+ F ++ A A + +E+ Q+H ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 429 KTGLAFD-VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K G D V V N L+++Y KCG G+ K+F+ + + VSW+SLI F + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE-----EGLHLYRIMENEYG--IIPTREH 540
+ F M V P+ TLV V+TACS++ + E + +H Y + + E II T
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT--- 241
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+V + + G + ++ + D+V W ++L+S
Sbjct: 242 ---LVAMYGKLGKLASSKVLLGSFG-GRDLVTWNTVLSS 276
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 302 bits (773), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 183/548 (33%), Positives = 284/548 (51%), Gaps = 40/548 (7%)
Query: 35 PST--YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMG 92
P T Y ++ A + ++S R+V D I QP++ N++L Y K G + +
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRI----PQPNLFSWNNLLLAYSKAGLISEMEST 94
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGLGS 151
F+K+P R+ V+W +I G S + A+K Y M++ + T +++K S G
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
V LG+Q+H VIK S+L+ + L+ MY I DA+ VF G+ ++ + S++
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALI 271
G +AL F M D SW A+I
Sbjct: 215 LLACGMIEDALQLFRGM--------------------------------EKDSVSWAAMI 242
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
G+A + A EA+ F EM+ + L D S+L AC G + +G Q+H+ II+ F
Sbjct: 243 KGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ 302
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
++ V +A++ MY KC L A VF + K + VSW +++ Q +AEE ++F
Sbjct: 303 DHIYVGSALIDMYCKCKCLHYAKTVFDRM-KQKNVVSWTAMVVGYGQTGRAEEAVKIFLD 361
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
M S I PDH T + ACA ++SLE +Q H +GL V V N L+ +Y KCG
Sbjct: 362 MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGD 421
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+ + +LFN M D VSW++++ YAQFG E ++LF +M G+ P+ VTL GV++A
Sbjct: 422 IDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISA 481
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
CS GLVE+G +++M +EYGI+P+ H SC++DL +R+G + EA FIN M D +
Sbjct: 482 CSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAI 541
Query: 572 VWKSLLAS 579
W +LL++
Sbjct: 542 GWTTLLSA 549
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 134/544 (24%), Positives = 231/544 (42%), Gaps = 109/544 (20%)
Query: 38 YAGLISACSSLRSLQLGRKV---HDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
Y+ I C L + R V H +I+ + P+ L N+I++ Y S AR FD
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 95 KMPQRNV-------------------------------VSWTAMIAGCSQNYQENDAIKL 123
++PQ N+ V+W +I G S + A+K
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 124 YIQMLQS-GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
Y M++ + T +++K S G V LG+Q+H VIK S+L+ + L+ MY
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 183 KFDRILDARNVFSGI------------------------------ARKDVTSWGSMIAAF 212
I DA+ VF G+ KD SW +MI
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGL 245
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS----------------------- 249
++ G EA+ F EM G + +++ FGSV AC
Sbjct: 246 AQNGLAKEAIECFREMKVQG-LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDH 304
Query: 250 -----------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
++A+ +F+ + ++ SW A++ G A EA+ +F +M+
Sbjct: 305 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ PD T+ + AC +L +G Q H I G V V N+++T+Y KC + +
Sbjct: 365 SGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDD 424
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
+ +F E+ D+VSW ++++A Q +A E +LF +M+ +KPD +T V+ AC+
Sbjct: 425 STRLFNEMNVR-DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS 483
Query: 413 KMASLEMVTQLHCYIT-KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSW 470
+ +E + +T + G+ + + ++D++ + G L A + N M PD + W
Sbjct: 484 RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGW 543
Query: 471 SSLI 474
++L+
Sbjct: 544 TTLL 547
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 173/347 (49%), Gaps = 17/347 (4%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+ L + L EA+ + +++ + ++ AC L ++ G+++H I+ +
Sbjct: 242 IKGLAQNGLAKEAIECFR-EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN 300
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
Q + + + +++MY KC L A+ FD+M Q+NVVSWTAM+ G Q + +A+K+++
Sbjct: 301 FQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFL 360
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M +SG+ P +T G I AC+ + S+ G Q H I S ++ N+L+ +Y K
Sbjct: 361 DMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCG 420
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
I D+ +F+ + +D SW +M++A+++ G +E + F++M+ HG +P+ V
Sbjct: 421 DIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG-LKPDGVTLTGVI 479
Query: 246 SACS---------NFARILFNEID-SPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
SACS + +++ +E P + ++ +I + EAM + M
Sbjct: 480 SACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM---PF 536
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT 342
PD + +LL AC + L G +I++ D + P +L+
Sbjct: 537 PPDAIGWTTLLSACRNKGNLEIGKWAAESLIEL--DPHHPAGYTLLS 581
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 191/433 (44%), Gaps = 79/433 (18%)
Query: 23 DFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGK 82
DFS N T + T ++ SS + LG+++H ++ + +++ + +L MY
Sbjct: 132 DFSANLTRV-----TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYAN 186
Query: 83 CGSLEDARMGFDKMPQRNVV------------------------------SWTAMIAGCS 112
G + DA+ F + RN V SW AMI G +
Sbjct: 187 VGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLA 246
Query: 113 QNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
QN +AI+ + +M G+ Q+ FGS++ AC GLG++ G+Q+HA +I++ H+
Sbjct: 247 QNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIY 306
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
+ALI MY K + A+ VF + +K+V SW +M+ + + G EA+ F +M G
Sbjct: 307 VGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG 366
Query: 233 AYQPNEFIFGSVFSACSNFARI-------------------------------------- 254
P+ + G SAC+N + +
Sbjct: 367 I-DPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDS 425
Query: 255 --LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
LFNE++ D SW A+++ A A E + LF +M L PDG+T+ ++ AC R
Sbjct: 426 TRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISAC-SR 484
Query: 313 LTLYQGMQVHSYII--KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
L + Q + ++ + G ++ + ++ ++++ L A+ + D++ W
Sbjct: 485 AGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWT 544
Query: 371 SIIAACLQHNQAE 383
++++AC E
Sbjct: 545 TLLSACRNKGNLE 557
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 301 bits (772), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 189/623 (30%), Positives = 320/623 (51%), Gaps = 47/623 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +SS + LY+E L + + T++ TY +I AC+ + + +G VH ++
Sbjct: 155 NAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVV 214
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ DV + N +++ YG G + DA FD MP+RN+VSW +MI S N ++
Sbjct: 215 KTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFL 274
Query: 123 LYIQMLQS----GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
L +M++ MP T +++ C+ + LG+ +H +K L+ NAL+
Sbjct: 275 LLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALM 334
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML--------- 229
MY+K I +A+ +F K+V SW +M+ FS G +ML
Sbjct: 335 DMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKAD 394
Query: 230 -----------HHGAYQPN-----------EFIFGSV--------FSACSN--FARILFN 257
H ++ P+ EF++ + ++ C + +A+ +F+
Sbjct: 395 EVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFH 454
Query: 258 EIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
I S + SWNALI G A ++ ++ +M+ LLPD TV SLL AC +L
Sbjct: 455 GIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRL 514
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G +VH +II+ + ++ V ++L++Y C LC +F + ++ VSWN++I L
Sbjct: 515 GKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM-EDKSLVSWNTVITGYL 573
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
Q+ + +F +M+ I+ I+ V GAC+ + SL + + H Y K L D F
Sbjct: 574 QNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAF 633
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG 497
+ L+D+Y K GS+ + K+FN ++ SW+++I+GY G EA+KLF M+ G
Sbjct: 634 IACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTG 693
Query: 498 VSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEA 557
+P+ +T +GVLTAC+H GL+ EGL M++ +G+ P +H +CV+D+L RAG + +A
Sbjct: 694 HNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKA 753
Query: 558 EDFI-NQMACDADIVVWKSLLAS 579
+ +M+ +AD+ +WKSLL+S
Sbjct: 754 LRVVAEEMSEEADVGIWKSLLSS 776
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 157/614 (25%), Positives = 291/614 (47%), Gaps = 63/614 (10%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLS-KCQPDVVLQNH 75
+ V D S ++ + +R + L+ A + +++GRK+H + S + + D VL
Sbjct: 67 QEFVGDDESSSDAFLLVREA-LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTR 125
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMP 134
I+ MY CGS +D+R FD + +N+ W A+I+ S+N ++ ++ +I+M+ + ++P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
FT+ +IKAC+G+ V +G +H V+K+ + NAL++ Y + DA +F
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH---GAYQPNEFIFGSVFSACSNF 251
+ +++ SW SMI FS G+ E+ EM+ GA+ P+ +V C+
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 252 ----------------------------------------ARILFNEIDSPDLASWNALI 271
A+++F ++ ++ SWN ++
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 272 AGVASHSNANEAMSLFSEM--RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
G ++ + + + +M ++ D +T+ + + C L ++H Y +K
Sbjct: 366 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 425
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV-SWNSIIAACLQHNQAEELFRL 388
F N V NA + YAKC L A VF G + +V SWN++I Q N
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFH--GIRSKTVNSWNALIGGHAQSNDPRLSLDA 483
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
+M S + PD T ++ AC+K+ SL + ++H +I + L D+FV ++ +YI
Sbjct: 484 HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 543
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
CG L + + LF+ ME+ +VSW+++I GY Q G D AL +F +M G+ ++++ V
Sbjct: 544 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 603
Query: 509 LTACS-----HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
ACS +G L ++E++ I CS ++D+ A+ G + ++ N
Sbjct: 604 FGACSLLPSLRLGREAHAYALKHLLEDDAFIA-----CS-LIDMYAKNGSITQSSKVFNG 657
Query: 564 MACDADIVVWKSLL 577
+ + W +++
Sbjct: 658 LK-EKSTASWNAMI 670
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 188/414 (45%), Gaps = 49/414 (11%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
+++H + L + + ++ N + Y KCGSL A+ F + + V SW A+I G +Q+
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
++ ++QM SG++P FT S++ ACS L S+ LG+++H +I++ L
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 534
Query: 175 NALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG-- 232
+++++Y + + +F + K + SW ++I + + G+ AL F +M+ +G
Sbjct: 535 LSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 594
Query: 233 --------------------------AYQPNEFIFGSVFSACS-----------NFARIL 255
AY + F ACS + +
Sbjct: 595 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 654
Query: 256 FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTL 315
FN + ASWNA+I G H A EA+ LF EM+ PD LT +L AC +
Sbjct: 655 FNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLI 714
Query: 316 YQGMQVHSYIIKM----GFDSNVPVCNAILTMYAKCSVLCNAL-LVFKELGKNADSVSWN 370
++G++ Y+ +M G N+ ++ M + L AL +V +E+ + AD W
Sbjct: 715 HEGLR---YLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWK 771
Query: 371 SIIAACLQHNQAEELFRLFSRM--LASQIKPDHITFNDVMGACAKMASLEMVTQ 422
S++++C H E ++ +++ L + +++ +++ K + V Q
Sbjct: 772 SLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQ 825
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 152/307 (49%), Gaps = 23/307 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T L+SACS L+SL+LG++VH I+ + + D+ + +L++Y CG L + FD M
Sbjct: 498 TVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM 557
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+++VSW +I G QN + A+ ++ QM+ G+ + + ACS L S+ LGR
Sbjct: 558 EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGR 617
Query: 157 QLHAHVIKSEHGSHLIAQNALIA-----MYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ HA+ +K HL+ +A IA MY K I + VF+G+ K SW +MI
Sbjct: 618 EAHAYALK-----HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 672
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEIDS----- 261
+ G EA+ F EM G + P++ F V +AC++ I +++ S
Sbjct: 673 YGIHGLAKEAIKLFEEMQRTG-HNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLK 731
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQV 321
P+L + +I + ++A+ + +E E D SLL +C L G +V
Sbjct: 732 PNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE--ADVGIWKSLLSSCRIHQNLEMGEKV 789
Query: 322 HSYIIKM 328
+ + ++
Sbjct: 790 AAKLFEL 796
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 299 bits (766), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 182/596 (30%), Positives = 304/596 (51%), Gaps = 45/596 (7%)
Query: 28 NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
T + ST ++ S R+L GR VH I+ + + N ++N Y KCG L
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQN---YQENDAIKLYIQMLQSGVMPGQFTFGSIIK 144
A F+ + ++VVSW ++I G SQN ++L+ +M ++P +T I K
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 145 ACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTS 204
A S L S +GRQ HA V+K + +L+ MY K + D VF+ + ++ +
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYT 186
Query: 205 WGSMIAAFSKLGYELEALCHFNEMLHHGAYQPN-EFIFGSV------------------- 244
W +M++ ++ G EA+ FN L + +++F +V
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCI 246
Query: 245 --------FSACSNFARILFNEIDSPDLA-------------SWNALIAGVASHSNANEA 283
F A SN ++++ +S + A +W+A++ G + + + EA
Sbjct: 247 TIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEA 306
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
+ LFS M + P T+ +L AC L +G Q+HS+++K+GF+ ++ A++ M
Sbjct: 307 VKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDM 366
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
YAK L +A F L + D W S+I+ +Q++ EE L+ RM + I P+ T
Sbjct: 367 YAKAGCLADARKGFDCL-QERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPT 425
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
V+ AC+ +A+LE+ Q+H + K G +V + + L +Y KCGSL +F
Sbjct: 426 MASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP 485
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
N DVVSW+++I G + G GDEAL+LF M + G+ P+ VT V +++ACSH G VE G
Sbjct: 486 NKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWF 545
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ +M ++ G+ P +H +C+VDLL+RAG + EA++FI D + +W+ LL++
Sbjct: 546 YFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSA 601
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + + EAL+ Y + I P T A ++ ACSSL +L+LG++VH H +
Sbjct: 395 ISGYVQNSDNEEALILYRRMKTAGIIPNDP-TMASVLKACSSLATLELGKQVHGHTIKHG 453
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+V + + + MY KCGSLED + F + P ++VVSW AMI+G S N Q ++A++L+
Sbjct: 454 FGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFE 513
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ML G+ P TF +II ACS G V G
Sbjct: 514 EMLAEGMEPDDVTFVNIISACSHKGFVERG 543
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 297 bits (761), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 297/584 (50%), Gaps = 47/584 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKC-QPDVVLQNHILNMYGKCGSLEDARMGFDK 95
TY+ +++AC+SL L+ G+ V ++ KC DV + I+++Y KCG + +A F +
Sbjct: 253 TYSSVLAACASLEKLRFGKVVQARVI--KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSR 310
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+P +VVSWT M++G +++ A++++ +M SGV T S+I AC VC
Sbjct: 311 IPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA 370
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSG---IARKDVTSWGSMIAAF 212
Q+HA V KS ALI+MY+K I + VF I R+++ + MI +F
Sbjct: 371 SQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSF 428
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA--CSNFAR----------------- 253
S+ +A+ F ML G + +EF S+ S C N +
Sbjct: 429 SQSKKPGKAIRLFTRMLQEG-LRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTV 487
Query: 254 ------------------ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
LF I D A W ++I+G + EA+ LFSEM D
Sbjct: 488 GSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGT 547
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
PD T+ ++L C +L +G ++H Y ++ G D + + +A++ MY+KC L A
Sbjct: 548 SPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQ 607
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
V+ L D VS +S+I+ QH ++ F LF M+ S D + ++ A A
Sbjct: 608 VYDRL-PELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSD 666
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+ Q+H YITK GL + V + L+ +Y K GS+ K F+ + PD+++W++LI
Sbjct: 667 ESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIA 726
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
YAQ G +EAL+++ M+ G P+ VT VGVL+ACSH GLVEE M +YGI
Sbjct: 727 SYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIE 786
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P H C+VD L R+G + EAE FIN M D +VW +LLA+
Sbjct: 787 PENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAA 830
Score = 206 bits (524), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 156/576 (27%), Positives = 275/576 (47%), Gaps = 52/576 (9%)
Query: 46 SSLRSLQLGRKVHDHILLSKCQP-DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSW 104
S L +L+ + + H+L P DV L +L+ Y GS+ DA FD +PQ +VVS
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 105 TAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK 164
MI+G Q+ ++++ + +M G + ++GS+I ACS L + + H IK
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIK 178
Query: 165 SEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCH 224
+ + + ++ALI +++K R DA VF +V W ++IA +
Sbjct: 179 MGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDL 238
Query: 225 FNEMLHHGAYQPNEFIFGSVFSACSNFARI------------------------------ 254
F+EM G +P+ + + SV +AC++ ++
Sbjct: 239 FHEMC-VGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAK 297
Query: 255 ---------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
+F+ I +P + SW +++G ++A A+ +F EMR + + TV S+
Sbjct: 298 CGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSV 357
Query: 306 LCACIGRLTLY-QGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
+ AC GR ++ + QVH+++ K GF + V A+++MY+K + + VF++L
Sbjct: 358 ISAC-GRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQ 416
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
N +I + Q + + RLF+RML ++ D + ++ + L + Q+H
Sbjct: 417 RQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVH 473
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
Y K+GL D+ V + L +Y KCGSL + KLF + D W+S+I G+ ++G
Sbjct: 474 GYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLR 533
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCS 542
EA+ LF+ M G SP+ TL VLT CS + G +H Y + GI + S
Sbjct: 534 EAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL---RAGIDKGMDLGS 590
Query: 543 CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+V++ ++ G + A +++ + D V SL++
Sbjct: 591 ALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSLIS 625
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 149/583 (25%), Positives = 259/583 (44%), Gaps = 47/583 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+Y +ISACS+L++ V H + V+++ +++++ K EDA F
Sbjct: 152 SYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDS 211
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
NV W +IAG +N L+ +M P +T+ S++ AC+ L + G+
Sbjct: 212 LSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGK 271
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+ A VIK + A++ +Y K + +A VFS I V SW M++ ++K
Sbjct: 272 VVQARVIKC-GAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSN 330
Query: 217 YELEALCHFNEMLHHG-----------------------AYQPNEFIFGSVFSACSNFAR 253
AL F EM H G A Q + ++F S F S+ A
Sbjct: 331 DAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAA 390
Query: 254 IL----------------FNEIDSPDLASW-NALIAGVASHSNANEAMSLFSEMRDRELL 296
L F ++D + N +I + +A+ LF+ M L
Sbjct: 391 ALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLR 450
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
D +V SLL + + L L G QVH Y +K G ++ V +++ T+Y+KC L + +
Sbjct: 451 TDEFSVCSLL-SVLDCLNL--GKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKL 507
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F+ + D+ W S+I+ ++ E LFS ML PD T V+ C+ S
Sbjct: 508 FQGI-PFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPS 566
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L ++H Y + G+ + + + L+++Y KCGSL AR++++ + D VS SSLI G
Sbjct: 567 LPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISG 626
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
Y+Q G + LF M G + + + +L A + G ++ + + G+
Sbjct: 627 YSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYI-TKIGLCT 685
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
S ++ + ++ G + + +Q+ D++ W +L+AS
Sbjct: 686 EPSVGSSLLTMYSKFGSIDDCCKAFSQIN-GPDLIAWTALIAS 727
Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 231/506 (45%), Gaps = 54/506 (10%)
Query: 16 NEALVAYDFSQN--NTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQ 73
N+A A + + ++ + I T +ISAC + +VH + S D +
Sbjct: 330 NDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVA 389
Query: 74 NHILNMYGKCGSLEDARMGF---DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS 130
+++MY K G ++ + F D + ++N+V+ MI SQ+ + AI+L+ +MLQ
Sbjct: 390 AALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQE 447
Query: 131 GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDA 190
G+ +F+ S++ S L + LG+Q+H + +KS L ++L +Y+K + ++
Sbjct: 448 GLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEES 504
Query: 191 RNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
+F GI KD W SMI+ F++ GY EA+ F+EML G P+E +V + CS+
Sbjct: 505 YKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGT-SPDESTLAAVLTVCSS 563
Query: 251 ----------------------------------------FARILFNEIDSPDLASWNAL 270
AR +++ + D S ++L
Sbjct: 564 HPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSL 623
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
I+G + H + LF +M D + S+L A G QVH+YI K+G
Sbjct: 624 ISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGL 683
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
+ V +++LTMY+K + + F ++ D ++W ++IA+ QH +A E ++++
Sbjct: 684 CTEPSVGSSLLTMYSKFGSIDDCCKAFSQI-NGPDLIAWTALIASYAQHGKANEALQVYN 742
Query: 391 RMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFDVFVMNGLMDIYIKC 449
M KPD +TF V+ AC+ + E L+ + G+ + ++D +
Sbjct: 743 LMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRS 802
Query: 450 GSLGSARKLFNFME-NPDVVSWSSLI 474
G L A N M PD + W +L+
Sbjct: 803 GRLREAESFINNMHIKPDALVWGTLL 828
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 172/382 (45%), Gaps = 42/382 (10%)
Query: 43 SACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVV 102
S S L L LG++VH + L S D+ + + + +Y KCGSLE++ F +P ++
Sbjct: 458 SLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNA 517
Query: 103 SWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV 162
W +MI+G ++ +AI L+ +ML G P + T +++ CS S+ G+++H +
Sbjct: 518 CWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYT 577
Query: 163 IKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEAL 222
+++ + +AL+ MY+K + AR V+ + D S S+I+ +S+ G +
Sbjct: 578 LRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGF 637
Query: 223 CHFNEMLHHGAYQPNEFIFGSVFSAC---------------------------------- 248
F +M+ G + + F S+ A
Sbjct: 638 LLFRDMVMSG-FTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTM 696
Query: 249 -SNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTV 302
S F I F++I+ PDL +W ALIA A H ANEA+ +++ M+++ PD +T
Sbjct: 697 YSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTF 756
Query: 303 HSLLCACI-GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG 361
+L AC G L ++S + G + ++ + L A +
Sbjct: 757 VGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMH 816
Query: 362 KNADSVSWNSIIAACLQHNQAE 383
D++ W +++AAC H + E
Sbjct: 817 IKPDALVWGTLLAACKIHGEVE 838
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 148/284 (52%), Gaps = 14/284 (4%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
ST A +++ CSS SL G+++H + L + + L + ++NMY KCGSL+ AR +D+
Sbjct: 552 STLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDR 611
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+P+ + VS +++I+G SQ+ D L+ M+ SG F SI+KA + LG
Sbjct: 612 LPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLG 671
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
Q+HA++ K + ++L+ MY+KF I D FS I D+ +W ++IA++++
Sbjct: 672 AQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQH 731
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI--LFNEIDS--------PDLA 265
G EAL +N M G ++P++ F V SACS+ + + ++S P+
Sbjct: 732 GKANEALQVYNLMKEKG-FKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENR 790
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+ ++ + EA S + M + PD L +LL AC
Sbjct: 791 HYVCMVDALGRSGRLREAESFINNMH---IKPDALVWGTLLAAC 831
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 291 bits (745), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 179/592 (30%), Positives = 296/592 (50%), Gaps = 57/592 (9%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNM----YGKCGSLEDARMGF 93
Y L++ ++ +S+ + +H H++ + HIL+ Y CG + AR F
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGG-----RVSGHILSTLSVTYALCGHITYARKLF 72
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV--MPGQFTFGSIIKACSGLGS 151
++MPQ +++S+ +I + +DAI ++I+M+ GV +P +T+ + KA L S
Sbjct: 73 EEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKS 132
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ LG +H +++S G QNAL+AMY F ++ AR+VF + +DV SW +MI+
Sbjct: 133 MKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISG 192
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-------------------- 251
+ + GY +AL F+ M++ + I S+ C +
Sbjct: 193 YYRNGYMNDALMMFDWMVNESVDLDHATIV-SMLPVCGHLKDLEMGRNVHKLVEEKRLGD 251
Query: 252 --------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
AR +F+ ++ D+ +W +I G + A+ L M+
Sbjct: 252 KIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQ 311
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ P+ +T+ SL+ C L + G +H + ++ S++ + ++++MYAKC +
Sbjct: 312 FEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVD 371
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
VF K + W++IIA C+Q+ + LF RM ++P+ T N ++ A
Sbjct: 372 LCFRVFSGASK-YHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAY 430
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME----NPDV 467
A +A L +HCY+TKTG + GL+ +Y KCG+L SA K+FN ++ + DV
Sbjct: 431 AALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDV 490
Query: 468 VSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI 527
V W +LI GY G G AL++F M GV+PN +T L ACSH GLVEEGL L+R
Sbjct: 491 VLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRF 550
Query: 528 MENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M Y + H +C+VDLL RAG + EA + I + + VW +LLA+
Sbjct: 551 MLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602
Score = 189 bits (479), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 136/522 (26%), Positives = 233/522 (44%), Gaps = 71/522 (13%)
Query: 11 KQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQP 68
++ LY++A+ + + ++ P TY + A L+S++LG VH IL S
Sbjct: 92 REGLYHDAISVF-IRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGR 150
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D +QN +L MY G +E AR FD M R+V+SW MI+G +N NDA+ ++ M+
Sbjct: 151 DKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMV 210
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
V T S++ C L + +GR +H V + G + +NAL+ MY K R+
Sbjct: 211 NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMD 270
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
+AR VF + R+DV +W MI +++ G ++E ++ +PN S+ S C
Sbjct: 271 EARFVFDRMERRDVITWTCMINGYTEDG-DVENALELCRLMQFEGVRPNAVTIASLVSVC 329
Query: 249 SNFARI---------------------------LFNEIDSPDL-------------ASWN 268
+ ++ ++ + DL W+
Sbjct: 330 GDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWS 389
Query: 269 ALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM 328
A+IAG + ++A+ LF MR ++ P+ T++SLL A L Q M +H Y+ K
Sbjct: 390 AIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT 449
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVF---KELGKNADSVSWNSIIAACLQHNQAEEL 385
GF S++ ++ +Y+KC L +A +F +E K+ D V W ++I+ H
Sbjct: 450 GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNA 509
Query: 386 FRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG---- 441
++F M+ S + P+ ITF + AC+ H + + GL F++
Sbjct: 510 LQVFMEMVRSGVTPNEITFTSALNACS-----------HSGLVEEGLTLFRFMLEHYKTL 558
Query: 442 --------LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + G L A L + P W +L+
Sbjct: 559 ARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALL 600
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 190/428 (44%), Gaps = 51/428 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + N+AL+ +D+ N + + + +T ++ C L+ L++GR VH +
Sbjct: 187 NTMISGYYRNGYMNDALMMFDWMVNES-VDLDHATIVSMLPVCGHLKDLEMGRNVHKLVE 245
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + ++N ++NMY KCG +++AR FD+M +R+V++WT MI G +++ +A++
Sbjct: 246 EKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALE 305
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L M GV P T S++ C V G+ LH ++ + S +I + +LI+MY
Sbjct: 306 LCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYA 365
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K R+ VFSG ++ W ++IA + +AL F M +PN
Sbjct: 366 KCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV-EPNIATLN 424
Query: 243 S--------------------------------------VFSACSNF--ARILFNEID-- 260
S V+S C A +FN I
Sbjct: 425 SLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEK 484
Query: 261 --SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG 318
S D+ W ALI+G H + + A+ +F EM + P+ +T S L AC + +G
Sbjct: 485 HKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEG 544
Query: 319 MQVHSYII---KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
+ + +++ K SN C I+ + + L A + + S W +++AA
Sbjct: 545 LTLFRFMLEHYKTLARSNHYTC--IVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602
Query: 376 CLQHNQAE 383
C+ H +
Sbjct: 603 CVTHENVQ 610
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 290 bits (741), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 176/554 (31%), Positives = 284/554 (51%), Gaps = 39/554 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ + AC + S++ G H L++ +V + N ++ MY +C SL DAR FD+M
Sbjct: 129 TFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM 188
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQS-GVMPGQFTFGSIIKACSGLGSVCLG 155
+VVSW ++I ++ + A++++ +M G P T +++ C+ LG+ LG
Sbjct: 189 SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLG 248
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+QLH + SE ++ N L+ MY K + +A VFS ++ KDV SW +M+A +S++
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVA 275
G +A+ F +M E D+ +W+A I+G A
Sbjct: 309 GRFEDAVRLFEKMQ---------------------------EEKIKMDVVTWSAAISGYA 341
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD---- 331
EA+ + +M + P+ +T+ S+L C L G ++H Y IK D
Sbjct: 342 QRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKN 401
Query: 332 ---SNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQHNQAEELFR 387
V N ++ MYAKC + A +F L K D V+W +I QH A +
Sbjct: 402 GHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALE 461
Query: 388 LFSRMLAS--QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL-AFDVFVMNGLMD 444
L S M Q +P+ T + + ACA +A+L + Q+H Y + A +FV N L+D
Sbjct: 462 LLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLID 521
Query: 445 IYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
+Y KCGS+ AR +F+ M + V+W+SL+ GY G G+EAL +F MR +G + VT
Sbjct: 522 MYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVT 581
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
L+ VL ACSH G++++G+ + M+ +G+ P EH +C+VDLL RAG ++ A I +M
Sbjct: 582 LLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641
Query: 565 ACDADIVVWKSLLA 578
+ VVW + L+
Sbjct: 642 PMEPPPVVWVAFLS 655
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 192/449 (42%), Gaps = 89/449 (19%)
Query: 24 FSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYG 81
FS+ RP T ++ C+SL + LG+++H + S+ ++ + N +++MY
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY----------------- 124
KCG +++A F M ++VVSW AM+AG SQ + DA++L+
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335
Query: 125 ------------------IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI--- 163
QML SG+ P + T S++ C+ +G++ G+++H + I
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 164 ----KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK--DVTSWGSMIAAFSKLGY 217
K+ HG + N LI MY K ++ AR +F ++ K DV +W MI +S+ G
Sbjct: 396 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 218 ELEALCHFNEMLHHG-AYQPNEFIFGSVFSACSNF------------------------- 251
+AL +EM +PN F AC++
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 252 ----------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
AR++F+ + + + +W +L+ G H EA+ +F EMR
Sbjct: 516 SNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 575
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILT-MYAKCSVLCNAL 354
DG+T+ +L AC + QGM+ + + + S P A L + + L AL
Sbjct: 576 KLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAAL 635
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ +E+ V W + ++ C H + E
Sbjct: 636 RLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 156/313 (49%), Gaps = 19/313 (6%)
Query: 270 LIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMG 329
LI A+ S+ +SLFS E+ P +H C I ++ L +H ++ G
Sbjct: 6 LIPNAAAKSHQYIKVSLFSTSAP-EITPP--FIHK--CKTISQVKL-----IHQKLLSFG 55
Query: 330 FDSNVPVCNAILTMYAKCSVLCNALLVFKELGK-NADSVSWNSIIAACLQHNQAEELFRL 388
+ + + + +++ Y L +A+ + + +A WNS+I + + A + L
Sbjct: 56 ILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYL 114
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
F M + PD+ TF V AC +++S+ H TG +VFV N L+ +Y +
Sbjct: 115 FGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSR 174
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS-LGVSPNLVTLVG 507
C SL ARK+F+ M DVVSW+S+I YA+ G AL++F+RM + G P+ +TLV
Sbjct: 175 CRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVN 234
Query: 508 VLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMA 565
VL C+ +G G LH + + +I +C+VD+ A+ G + EA + M+
Sbjct: 235 VLPPCASLGTHSLGKQLHCFAVTSE---MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS 291
Query: 566 CDADIVVWKSLLA 578
D+V W +++A
Sbjct: 292 VK-DVVSWNAMVA 303
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 288 bits (738), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 174/580 (30%), Positives = 298/580 (51%), Gaps = 45/580 (7%)
Query: 33 IRPSTYAGLISACS-SLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+ S L+ C+ S +SL+ + VH IL + DVVL ++N+Y C AR
Sbjct: 1 MESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARH 60
Query: 92 GFDKMPQR-NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGV-MPGQFTFGSIIKACSGL 149
F+ R +V W ++++G S+N +D ++++ ++L + +P FTF ++IKA L
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G LGR +H V+KS + ++ ++L+ MY KF+ ++ VF + +DV SW ++I
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------ 251
+ F + G +AL F M G ++PN SACS
Sbjct: 181 SCFYQSGEAEKALELFGRMESSG-FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGF 239
Query: 252 ----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
AR +F ++ L +WN++I G + ++ + + +
Sbjct: 240 ELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNR 299
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M P T+ S+L AC L G +H Y+I+ ++++ V +++ +Y KC
Sbjct: 300 MIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
A VF + K+ + SWN +I++ + + ++ +M++ +KPD +TF V+
Sbjct: 360 ANLAETVFSKTQKDV-AESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLP 418
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
AC+++A+LE Q+H I+++ L D +++ L+D+Y KCG+ A ++FN + DVVS
Sbjct: 419 ACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS 478
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
W+ +I Y G EAL F M+ G+ P+ VTL+ VL+AC H GL++EGL + M
Sbjct: 479 WTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMR 538
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDAD 569
++YGI P EH SC++D+L RAG + EA + I Q +D
Sbjct: 539 SKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSD 578
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 130/509 (25%), Positives = 224/509 (44%), Gaps = 51/509 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S K +++++ L + N + T+ +I A +L LGR +H ++
Sbjct: 75 NSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVV 134
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
S DVV+ + ++ MY K E++ FD+MP+R+V SW +I+ Q+ + A++
Sbjct: 135 KSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALE 194
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ +M SG P + I ACS L + G+++H +K +AL+ MY
Sbjct: 195 LFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYG 254
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K D + AR VF + RK + +W SMI + G + N M+ G +P++
Sbjct: 255 KCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT-RPSQTTLT 313
Query: 243 SVFSACS----------------------------------------NFARILFNEIDSP 262
S+ ACS N A +F++
Sbjct: 314 SILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD 373
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
SWN +I+ S N +A+ ++ +M + PD +T S+L AC L +G Q+H
Sbjct: 374 VAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIH 433
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
I + +++ + +A+L MY+KC A +F + K D VSW +I+A H Q
Sbjct: 434 LSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK-DVVSWTVMISAYGSHGQP 492
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMA----SLEMVTQLHCYITKTGLAFDVFV 438
E F M +KPD +T V+ AC L+ +Q+ +K G+ +
Sbjct: 493 REALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMR---SKYGIEPIIEH 549
Query: 439 MNGLMDIYIKCGSLGSARKLFNFMENPDV 467
+ ++DI + G L A ++ + P+
Sbjct: 550 YSCMIDILGRAGRLLEAYEIIQ--QTPET 576
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 131/258 (50%), Gaps = 3/258 (1%)
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
VH I+ +G +V +C +++ +Y C C+A VF+ +D WNS+++ +++
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 381 QAEELFRLFSRMLASQI-KPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+ +F R+L I PD TF +V+ A + + +H + K+G DV V
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVA 145
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
+ L+ +Y K ++ ++F+ M DV SW+++I + Q G ++AL+LF RM S G
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
PN V+L ++ACS + +E G ++R + G S +VD+ + C+ A +
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKK-GFELDEYVNSALVDMYGKCDCLEVARE 264
Query: 560 FINQMACDADIVVWKSLL 577
+M +V W S++
Sbjct: 265 VFQKMP-RKSLVAWNSMI 281
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 288 bits (738), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 185/601 (30%), Positives = 294/601 (48%), Gaps = 42/601 (6%)
Query: 20 VAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNM 79
+ Y F+ ++++ ST ++SA + +L LG VH + ++ + + +++M
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 80 YGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTF 139
Y KC +E A F+ + ++N V W AMI G + N + + ++L++ M SG FTF
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 140 GSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIAR 199
S++ C+ + +G Q H+ +IK + +L NAL+ MY K + DAR +F +
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 200 KDVTSWGSMIAAFSKLGYELEALCHFNEM-------------------LH-HGAYQPNEF 239
+D +W ++I ++ + E EA F M H HG YQ +
Sbjct: 492 RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Query: 240 IFGSV-----------------FSACS--NFARILFNEIDSPDLASWNALIAGVASHSNA 280
SV +S C AR +F+ + + S NALIAG S +N
Sbjct: 552 HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNNL 610
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN-A 339
EA+ LF EM R + P +T +++ AC +L G Q H I K GF S +
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS 670
Query: 340 ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
+L MY + A +F EL V W +++ Q+ EE + + M + P
Sbjct: 671 LLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLP 730
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D TF V+ C+ ++SL +H I D N L+D+Y KCG + + ++F
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVF 790
Query: 460 NFMEN-PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLV 518
+ M +VVSW+SLI GYA+ G ++ALK+F MR + P+ +T +GVLTACSH G V
Sbjct: 791 DEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKV 850
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+G ++ +M +YGI +H +C+VDLL R G + EA+DFI D +W SLL
Sbjct: 851 SDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLG 910
Query: 579 S 579
+
Sbjct: 911 A 911
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 266/520 (51%), Gaps = 9/520 (1%)
Query: 50 SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIA 109
+L++G+ VH L+ + L N I+++Y KC + A FD + +++V +W +M++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 110 GCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGS 169
S + ++ ++ + ++ + P +FTF ++ C+ +V GRQ+H +IK
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
+ AL+ MY K DRI DAR VF I + W + + + K G EA+ F M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 230 HHGAYQPNEFIFGSVFSACSNF-----ARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
G ++P+ F +V + AR+LF E+ SPD+ +WN +I+G A+
Sbjct: 254 DEG-HRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAI 312
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
F MR + T+ S+L A L G+ VH+ IK+G SN+ V +++++MY
Sbjct: 313 EYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
+KC + A VF+ L + D V WN++I + ++ ++ LF M +S D TF
Sbjct: 373 SKCEKMEAAAKVFEALEEKND-VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
++ CA LEM +Q H I K LA ++FV N L+D+Y KCG+L AR++F M +
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
D V+W+++I Y Q EA LF RM G+ + L L AC+HV + +G +
Sbjct: 492 RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Query: 525 YRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
+ + + G+ S ++D+ ++ G + +A + +
Sbjct: 552 H-CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSL 590
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/516 (26%), Positives = 227/516 (43%), Gaps = 78/516 (15%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T++ ++S C+ +++ GR++H ++ + + +++MY KC + DAR F+ +
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
N V WT + +G + +A+ ++ +M G P F ++I
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT----------- 270
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Y + ++ DAR +F ++ DV +W MI+ K G
Sbjct: 271 ------------------------YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------------- 254
E A+ +F M + + GSV SA A +
Sbjct: 307 CETVAIEYFFNM-RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVG 365
Query: 255 ------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+F ++ + WNA+I G A + +++ M LF +M+
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
D T SLL C L G Q HS IIK N+ V NA++ MYAKC L +A +
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F+ + + D+V+WN+II + +Q E F LF RM I D + AC +
Sbjct: 486 FERMC-DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHG 544
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
L Q+HC K GL D+ + L+D+Y KCG + ARK+F+ + VVS ++LI G
Sbjct: 545 LYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG 604
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
Y+Q +EA+ LF M + GV+P+ +T ++ AC
Sbjct: 605 YSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 116/213 (54%), Gaps = 2/213 (0%)
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSI 372
L L G VHS + +G DS + NAI+ +YAKC+ + A F L K D +WNS+
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK--DVTAWNSM 131
Query: 373 IAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGL 432
++ + ++ R F + +QI P+ TF+ V+ CA+ ++E Q+HC + K GL
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 433 AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTR 492
+ + L+D+Y KC + AR++F ++ +P+ V W+ L GY + G +EA+ +F R
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 493 MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
MR G P+ + V V+ +G +++ L+
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLF 284
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 117/515 (22%), Positives = 198/515 (38%), Gaps = 129/515 (25%)
Query: 154 LGRQLHAHVI-----------------------------------------KSEHGSHLI 172
LGR+++ HV+ K+ H LI
Sbjct: 29 LGRRIYGHVLPSHDQIHQRLLEICLGQCKLFKSRKVFDEMPQRLALALRIGKAVHSKSLI 88
Query: 173 --------AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCH 224
NA++ +Y K ++ A F KDVT+W SM++ +S +G + L
Sbjct: 89 LGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGKPGKVLRS 147
Query: 225 FNEMLHHGAYQPNEFIFGSVFSACS----------------------------------- 249
F + + + PN+F F V S C+
Sbjct: 148 FVSLFENQIF-PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYA 206
Query: 250 -----NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
+ AR +F I P+ W L +G EA+ +F MRD PD L
Sbjct: 207 KCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAF-- 264
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
V V N Y + L +A L+F E+ +
Sbjct: 265 -----------------------------VTVINT----YIRLGKLKDARLLFGEM-SSP 290
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
D V+WN +I+ + F M S +K T V+ A +A+L++ +H
Sbjct: 291 DVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVH 350
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
K GLA +++V + L+ +Y KC + +A K+F +E + V W+++I GYA G
Sbjct: 351 AEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESH 410
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV 544
+ ++LF M+S G + + T +L+ C+ +E G + I+ + + + +
Sbjct: 411 KVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK-KLAKNLFVGNAL 469
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
VD+ A+ G + +A +M CD D V W +++ S
Sbjct: 470 VDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGS 503
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S + Y EAL Y + + +T+ ++ CS L SL+ GR +H I
Sbjct: 704 MSGHSQNGFYEEALKFYK-EMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLA 762
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-NVVSWTAMIAGCSQNYQENDAIKLY 124
D + N +++MY KCG ++ + FD+M +R NVVSW ++I G ++N DA+K++
Sbjct: 763 HDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIF 822
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI-------KSEHGSHLIAQNAL 177
M QS +MP + TF ++ ACS G V GR++ +I + +H + ++
Sbjct: 823 DSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGR 882
Query: 178 IAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ D ++A+N+ + D W S++ A
Sbjct: 883 WGYLQEADDFIEAQNL-----KPDARLWSSLLGA 911
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 287 bits (734), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 179/594 (30%), Positives = 305/594 (51%), Gaps = 20/594 (3%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N+ +S L ++ +ALV Y + + R T A ++SACS + G + H +
Sbjct: 107 NNMISVLVRKGFEEKALVVYKRMVCDGFLPSR-FTLASVLSACSKVLDGVFGMRCHGVAV 165
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMG-FDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ ++ + N +L+MY KCG + D + F+ + Q N VS+TA+I G ++ + +A+
Sbjct: 166 KTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAV 225
Query: 122 KLYIQMLQSGVMPGQFTFGSII------KACSGLGSVC---LGRQLHAHVIKSEHGSHLI 172
+++ M + GV +I+ + C L + LG+Q+H ++ G L
Sbjct: 226 QMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLH 285
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
N+L+ +Y K + A +F+ + +V SW MI F + Y + F +
Sbjct: 286 LNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ-EYRSDKSVEFLTRMRDS 344
Query: 233 AYQPNEFIFGSVFSAC-----SNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
+QPNE SV AC R +F+ I P +++WNA+++G +++ + EA+S F
Sbjct: 345 GFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNF 404
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC 347
+M+ + L PD T+ +L +C L G Q+H +I+ N + + ++ +Y++C
Sbjct: 405 RQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSEC 464
Query: 348 SVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE-ELFRLFSRMLASQIK-PDHITFN 405
+ + +F + D WNS+I+ +HN + + LF RM + + P+ +F
Sbjct: 465 EKMEISECIFDDCINELDIACWNSMISG-FRHNMLDTKALILFRRMHQTAVLCPNETSFA 523
Query: 406 DVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENP 465
V+ +C+++ SL Q H + K+G D FV L D+Y KCG + SAR+ F+ +
Sbjct: 524 TVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRK 583
Query: 466 DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLY 525
+ V W+ +I GY G GDEA+ L+ +M S G P+ +T V VLTACSH GLVE GL +
Sbjct: 584 NTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEIL 643
Query: 526 RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
M+ +GI P +H C+VD L RAG + +AE + V+W+ LL+S
Sbjct: 644 SSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSS 697
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/547 (23%), Positives = 251/547 (45%), Gaps = 39/547 (7%)
Query: 55 RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQN 114
RKV D + + DV N L K G L +A FD MP+R+VVSW MI+ +
Sbjct: 61 RKVFDEMSVR----DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRK 116
Query: 115 YQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQ 174
E A+ +Y +M+ G +P +FT S++ ACS + G + H +K+ ++
Sbjct: 117 GFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVG 176
Query: 175 NALIAMYTKFDRILD-ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGA 233
NAL++MY K I+D VF +++ + S+ ++I ++ LEA+ F M G
Sbjct: 177 NALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGV 236
Query: 234 YQPNEFIFGSVFS------ACSNFARILFNEIDSP------------DLASWNALIAGVA 275
Q + ++ S C + + I NE+ DL N+L+ A
Sbjct: 237 -QVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYA 295
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM---GFDS 332
+ + N A +F+EM + ++ + + +G Y+ + ++ +M GF
Sbjct: 296 KNKDMNGAELIFAEMPEVNVVSWNIMI-------VGFGQEYRSDKSVEFLTRMRDSGFQP 348
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N C ++L + + +F + + + S +WN++++ + EE F +M
Sbjct: 349 NEVTCISVLGACFRSGDVETGRRIFSSIPQPSVS-AWNAMLSGYSNYEHYEEAISNFRQM 407
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
+KPD T + ++ +CA++ LE Q+H + +T ++ + +++GL+ +Y +C +
Sbjct: 408 QFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKM 467
Query: 453 GSARKLFNFMENP-DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGV-SPNLVTLVGVLT 510
+ +F+ N D+ W+S+I G+ +AL LF RM V PN + VL+
Sbjct: 468 EISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLS 527
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
+CS + + G + ++ G + + + D+ + G + A F + + +
Sbjct: 528 SCSRLCSLLHGRQFHGLVVKS-GYVSDSFVETALTDMYCKCGEIDSARQFFDAVL-RKNT 585
Query: 571 VVWKSLL 577
V+W ++
Sbjct: 586 VIWNEMI 592
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 152/317 (47%), Gaps = 42/317 (13%)
Query: 250 NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL-------------- 295
++AR +F+E+ D+ SWNA + + EA +F M +R++
Sbjct: 58 DYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKG 117
Query: 296 -----------------LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN 338
LP T+ S+L AC L GM+ H +K G D N+ V N
Sbjct: 118 FEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGN 177
Query: 339 AILTMYAKCSVLCN-ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
A+L+MYAKC + + + VF+ L + + VS+ ++I + N+ E ++F M +
Sbjct: 178 ALLSMYAKCGFIVDYGVRVFESLSQ-PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGV 236
Query: 398 KPDHITFNDVMG------ACAKMASL---EMVTQLHCYITKTGLAFDVFVMNGLMDIYIK 448
+ D + ++++ C ++ + E+ Q+HC + G D+ + N L++IY K
Sbjct: 237 QVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAK 296
Query: 449 CGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGV 508
+ A +F M +VVSW+ +I+G+ Q D++++ TRMR G PN VT + V
Sbjct: 297 NKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISV 356
Query: 509 LTACSHVGLVEEGLHLY 525
L AC G VE G ++
Sbjct: 357 LGACFRSGDVETGRRIF 373
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 31/224 (13%)
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCS-----------------VLCNALLVFK-- 358
G +H +I++MG S+ +CN +L +Y +C NA L F+
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 359 --ELGK---------NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDV 407
+LG+ D VSWN++I+ ++ E+ ++ RM+ P T V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 408 MGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL-GSARKLFNFMENPD 466
+ AC+K+ + H KTGL ++FV N L+ +Y KCG + ++F + P+
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 467 VVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
VS++++I G A+ EA+++F M GV + V L +L+
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 31/124 (25%)
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKC-------------------------------GS 451
+H +I + G+ D ++ N L+D+YI+C G
Sbjct: 28 IHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGD 87
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
LG A ++F+ M DVVSW+++I + G ++AL ++ RM G P+ TL VL+A
Sbjct: 88 LGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSA 147
Query: 512 CSHV 515
CS V
Sbjct: 148 CSKV 151
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 285 bits (730), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 185/556 (33%), Positives = 290/556 (52%), Gaps = 49/556 (8%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
D+ + N IL+ Y K G L A M FD+MP+R+ VSW MI+G + + DA L+ M
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 129 QSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL 188
+SG ++F ++K + + LG Q+H VIK + ++ ++L+ MY K +R+
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153
Query: 189 DARNVFSGIARKDVTSWGSMIAAFSK----------LGY-ELEA---------------- 221
DA F I+ + SW ++IA F + LG E++A
Sbjct: 154 DAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLL 213
Query: 222 ----LCHFNEMLH---------HGAYQPNEFIFGSVFSAC---SNFARILFNEIDSPDLA 265
C+ + +H H N I S ++ C S+ R+ S DL
Sbjct: 214 DDPMFCNLLKQVHAKVLKLGLQHEITICNAMI--SSYADCGSVSDAKRVFDGLGGSKDLI 271
Query: 266 SWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYI 325
SWN++IAG + H A LF +M+ + D T LL AC G G +H +
Sbjct: 272 SWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMV 331
Query: 326 IKMGFDSNVPVCNAILTMYAK--CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
IK G + NA+++MY + + +AL +F+ L K+ D +SWNSII Q +E
Sbjct: 332 IKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESL-KSKDLISWNSIITGFAQKGLSE 390
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
+ + FS + +S+IK D F+ ++ +C+ +A+L++ Q+H TK+G + FV++ L+
Sbjct: 391 DAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLI 450
Query: 444 DIYIKCGSLGSARKLFNFMENP-DVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+Y KCG + SARK F + + V+W+++ILGYAQ G G +L LF++M + V +
Sbjct: 451 VMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDH 510
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
VT +LTACSH GL++EGL L +ME Y I P EH + VDLL RAG V++A++ I
Sbjct: 511 VTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIE 570
Query: 563 QMACDADIVVWKSLLA 578
M + D +V K+ L
Sbjct: 571 SMPLNPDPMVLKTFLG 586
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 219/482 (45%), Gaps = 59/482 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
+++ L+ +S++ LG +VH ++ + +V + + +++MY KC +EDA F ++
Sbjct: 103 SFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEI 162
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ N VSW A+IAG Q A L M +++ V TF ++ L
Sbjct: 163 SEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLL 222
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI-ARKDVTSWGSMIAAFSK 214
+Q+HA V+K + NA+I+ Y + DA+ VF G+ KD+ SW SMIA FSK
Sbjct: 223 KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSK 282
Query: 215 LGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS------------------------- 249
+ A F +M H + + + + + SACS
Sbjct: 283 HELKESAFELFIQMQRHWV-ETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTS 341
Query: 250 -----------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
A LF + S DL SWN++I G A + +A+ FS +R
Sbjct: 342 ATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRS 401
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
E+ D +LL +C TL G Q+H+ K GF SN V ++++ MY+KC ++ +
Sbjct: 402 SEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIES 461
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A F+++ +V+WN++I QH + LFS+M +K DH+TF ++ AC+
Sbjct: 462 ARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACS 521
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI-------KCGSLGSARKLFNFME-N 464
++ +L L V+ + M+ Y + G + A++L M N
Sbjct: 522 HTGLIQEGLEL------LNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLN 575
Query: 465 PD 466
PD
Sbjct: 576 PD 577
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 206/461 (44%), Gaps = 43/461 (9%)
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H + IK S + N ++ Y KF + A +F + ++D SW +MI+ ++ G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 219 LEALCHFN------------------------------EMLH----HGAYQPNEFIFGSV 244
+A C F E +H G Y+ N ++ S+
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 245 FSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP-D 298
+ R+ F EI P+ SWNALIAG + A L M + + D
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
T LL + QVH+ ++K+G + +CNA+++ YA C + +A VF
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
LG + D +SWNS+IA +H E F LF +M ++ D T+ ++ AC+
Sbjct: 263 GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQI 322
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIK--CGSLGSARKLFNFMENPDVVSWSSLILG 476
LH + K GL N L+ +YI+ G++ A LF +++ D++SW+S+I G
Sbjct: 323 FGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITG 382
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIP 536
+AQ G ++A+K F+ +RS + + +L +CS + ++ G ++ + + G +
Sbjct: 383 FAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHA-LATKSGFVS 441
Query: 537 TREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
S ++ + ++ G + A Q++ V W +++
Sbjct: 442 NEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 195/419 (46%), Gaps = 47/419 (11%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ + T+A L++ L ++VH +L Q ++ + N +++ Y CGS+ DA+
Sbjct: 199 VTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAK 258
Query: 91 MGFDKMP-QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
FD + ++++SW +MIAG S++ + A +L+IQM + V +T+ ++ ACSG
Sbjct: 259 RVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGE 318
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD--RILDARNVFSGIARKDVTSWGS 207
G+ LH VIK A NALI+MY +F + DA ++F + KD+ SW S
Sbjct: 319 EHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNS 378
Query: 208 MIAAFSKLGYELEALCHFN------------------------------EMLH----HGA 233
+I F++ G +A+ F+ + +H
Sbjct: 379 IITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSG 438
Query: 234 YQPNEFIFGSV---FSACS--NFARILFNEIDSP-DLASWNALIAGVASHSNANEAMSLF 287
+ NEF+ S+ +S C AR F +I S +WNA+I G A H ++ LF
Sbjct: 439 FVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLF 498
Query: 288 SEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYAK 346
S+M ++ + D +T ++L AC + +G+++ + + + + A + + +
Sbjct: 499 SQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGR 558
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP-DHITF 404
++ A + + + N D + + + C + E ++ + +L +I+P DH T+
Sbjct: 559 AGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLL--EIEPEDHFTY 615
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 127/270 (47%), Gaps = 25/270 (9%)
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
H Y IK G S++ V N IL Y K L A ++F E+ K DSVSWN++I+
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKR-DSVSWNTMISGYTSCG 80
Query: 381 QAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMN 440
+ E+ + LF+ M S D +F+ ++ A + ++ Q+H + K G +V+V +
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMR------ 494
L+D+Y KC + A + F + P+ VSW++LI G+ Q A L M
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT 200
Query: 495 -SLGVSPNLVTLVGVLTACS-----HVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLL 548
G L+TL+ C+ H +++ GL ++E I C+ ++
Sbjct: 201 MDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGL------QHEITI------CNAMISSY 248
Query: 549 ARAGCVHEAEDFINQMACDADIVVWKSLLA 578
A G V +A+ + + D++ W S++A
Sbjct: 249 ADCGSVSDAKRVFDGLGGSKDLISWNSMIA 278
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 84/157 (53%), Gaps = 2/157 (1%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ ++ L +A+ + + ++ + I++ ++ L+ +CS L +LQLG+++H
Sbjct: 377 NSIITGFAQKGLSEDAVKFFSYLRS-SEIKVDDYAFSALLRSCSDLATLQLGQQIHALAT 435
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR-NVVSWTAMIAGCSQNYQENDAI 121
S + + + ++ MY KCG +E AR F ++ + + V+W AMI G +Q+ ++
Sbjct: 436 KSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSL 495
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
L+ QM V TF +I+ ACS G + G +L
Sbjct: 496 DLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 532
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 285 bits (730), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 173/586 (29%), Positives = 291/586 (49%), Gaps = 48/586 (8%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S ++ ++ ++L GR++H + DV + +++ Y K + +D R FD+
Sbjct: 94 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M +RNVV+WT +I+G ++N ++ + L+++M G P FTF + + + G G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
Q+H V+K+ + N+LI +Y K + AR +F K V +W SMI+ ++
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNE----------------- 258
G +LEAL F M + +E F SV C+N + F E
Sbjct: 274 GLDLEALGMFYSM-RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 259 --------------IDS----------PDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
+D+ ++ SW A+I+G + EA+ LFSEM+ +
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ P+ T +L A L + +VH+ ++K ++ + V A+L Y K + A
Sbjct: 393 VRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAA 448
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
VF + + D V+W++++A Q + E ++F + IKP+ TF+ ++ CA
Sbjct: 449 KVFSGI-DDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT 507
Query: 415 -ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
AS+ Q H + K+ L + V + L+ +Y K G++ SA ++F D+VSW+S+
Sbjct: 508 NASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSM 567
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I GYAQ G +AL +F M+ V + VT +GV AC+H GLVEEG + IM +
Sbjct: 568 ISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 627
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
I PT+EH SC+VDL +RAG + +A I M A +W+++LA+
Sbjct: 628 IAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAA 673
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/531 (25%), Positives = 253/531 (47%), Gaps = 56/531 (10%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
FDK P R+ S+ +++ G S++ + +A +L++ + + G+ F S++K + L
Sbjct: 50 FDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDE 109
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
GRQLH IK + +L+ Y K D R VF + ++V +W ++I+ +
Sbjct: 110 LFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGY 169
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGS----------------------------- 243
++ E L F M + G QPN F F +
Sbjct: 170 ARNSMNDEVLTLFMRMQNEGT-QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 228
Query: 244 ---------VFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
++ C N ARILF++ + + +WN++I+G A++ EA+ +F MR
Sbjct: 229 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 288
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+ + S++ C L Q+H ++K GF + + A++ Y+KC+ + +
Sbjct: 289 NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLD 348
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
AL +FKE+G + VSW ++I+ LQ++ EE LFS M ++P+ T++ ++ A
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
++ +++H + KT V L+D Y+K G + A K+F+ +++ D+V+WS+
Sbjct: 409 VISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGL-VEEGLHLYRIMENE 531
++ GYAQ G + A+K+F + G+ PN T +L C+ + +G +
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFH-----G 519
Query: 532 YGIIPTREHCSCV----VDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ I + CV + + A+ G + AE+ + + D+V W S+++
Sbjct: 520 FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMIS 569
Score = 172 bits (436), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 208/444 (46%), Gaps = 57/444 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S L EAL + +S +R+ S++A +I C++L+ L+ ++H ++
Sbjct: 264 NSMISGYAANGLDLEALGMF-YSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVV 322
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP-QRNVVSWTAMIAGCSQNYQENDAI 121
D ++ ++ Y KC ++ DA F ++ NVVSWTAMI+G QN + +A+
Sbjct: 323 KYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAV 382
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
L+ +M + GV P +FT+ I+ A V ++HA V+K+ + AL+ Y
Sbjct: 383 DLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAY 438
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K ++ +A VFSGI KD+ +W +M+A +++ G A+ F E L G +PNEF F
Sbjct: 439 VKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE-LTKGGIKPNEFTF 497
Query: 242 GSVFSACS-----------------------------------------NFARILFNEID 260
S+ + C+ A +F
Sbjct: 498 SSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR 557
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
DL SWN++I+G A H A +A+ +F EM+ R++ DG+T + AC + +G +
Sbjct: 558 EKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEK 617
Query: 321 VHSYIIKMGFDSNVPVCNA-ILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+++ + N+ ++ +Y++ L A+ V + + A S W +I+AAC H
Sbjct: 618 YFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVH 677
Query: 380 NQAEELFRLFSRMLASQI---KPD 400
+ E R+ A +I KP+
Sbjct: 678 KKTE-----LGRLAAEKIIAMKPE 696
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 171/356 (48%), Gaps = 18/356 (5%)
Query: 231 HGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
+G Q + FG+V S+ A LF++ D S+ +L+ G + EA LF +
Sbjct: 25 NGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNI 84
Query: 291 R------DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMY 344
D + L V + LC L+ G Q+H IK GF +V V +++ Y
Sbjct: 85 HRLGMEMDCSIFSSVLKVSATLCD-----ELF-GRQLHCQCIKFGFLDDVSVGTSLVDTY 138
Query: 345 AKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
K S + VF E+ K + V+W ++I+ +++ +E+ LF RM +P+ TF
Sbjct: 139 MKGSNFKDGRKVFDEM-KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTF 197
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
+G A+ Q+H + K GL + V N L+++Y+KCG++ AR LF+ E
Sbjct: 198 AAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV 257
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE--EGL 522
VV+W+S+I GYA G EAL +F MR V + + V+ C+++ + E L
Sbjct: 258 KSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQL 317
Query: 523 HLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
H + +YG + + + ++ ++ + +A ++ C ++V W ++++
Sbjct: 318 HCSVV---KYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMIS 370
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 284 bits (727), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 180/580 (31%), Positives = 287/580 (49%), Gaps = 51/580 (8%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
L+S C+++ SL R+ H + + D+ + ++++YG G +DAR+ FD++P+ +
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
W M+ N + + +KLY +++ G F +KAC+ L + G+++H
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
++K +++ L+ MY K I A VF+ I ++V W SMIA + K E
Sbjct: 167 QLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE 225
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------------------- 251
L FN M + NE+ +G++ AC+
Sbjct: 226 GLVLFNRMRENNVLG-NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLL 284
Query: 252 -----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGL 300
AR +FNE DL W A+I G + + NEA+SLF +M+ E+ P+ +
Sbjct: 285 DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCV 344
Query: 301 TVHSLLCACIGRLTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
T+ S+L C L G VH IK+G +D+NV NA++ MYAKC +A VF E
Sbjct: 345 TIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVA--NALVHMYAKCYQNRDAKYVF-E 401
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
+ D V+WNSII+ Q+ E LF RM + + P+ +T + ACA + SL +
Sbjct: 402 MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV 461
Query: 420 VTQLHCYITKTGL--AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGY 477
+ LH Y K G + V V L+D Y KCG SAR +F+ +E + ++WS++I GY
Sbjct: 462 GSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGY 521
Query: 478 AQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPT 537
+ G +L+LF M PN T +L+AC H G+V EG + M +Y P+
Sbjct: 522 GKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPS 581
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+H +C+VD+LARAG + +A D I +M D+ + + L
Sbjct: 582 TKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFL 621
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 141/523 (26%), Positives = 246/523 (47%), Gaps = 60/523 (11%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
E + YD + R ++ + AC+ L+ L G+K+H ++ +VVL +
Sbjct: 125 EVVKLYDLLMKH-GFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG-L 182
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
L+MY KCG ++ A F+ + RNVV WT+MIAG +N + + L+ +M ++ V+ +
Sbjct: 183 LDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNE 242
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIKS--EHGSHLIAQNALIAMYTKFDRILDARNVF 194
+T+G++I AC+ L ++ G+ H ++KS E S L+ +L+ MY K I +AR VF
Sbjct: 243 YTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVT--SLLDMYVKCGDISNARRVF 300
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC------ 248
+ + D+ W +MI ++ G EAL F +M +PN SV S C
Sbjct: 301 NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM-KGVEIKPNCVTIASVLSGCGLIENL 359
Query: 249 ---------------------------------SNFARILFNEIDSPDLASWNALIAGVA 275
+ A+ +F D+ +WN++I+G +
Sbjct: 360 ELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFS 419
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF--DSN 333
+ + +EA+ LF M + P+G+TV SL AC +L G +H+Y +K+GF S+
Sbjct: 420 QNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSS 479
Query: 334 VPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML 393
V V A+L YAKC +A L+F + + ++++W+++I + LF ML
Sbjct: 480 VHVGTALLDFYAKCGDPQSARLIFDTI-EEKNTITWSAMIGGYGKQGDTIGSLELFEEML 538
Query: 394 ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG----LMDIYIKC 449
Q KP+ TF ++ AC MV + Y + ++ ++D+ +
Sbjct: 539 KKQQKPNESTFTSILSACGHTG---MVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARA 595
Query: 450 GSLGSARKLFNFME-NPDVVSWSSLILG---YAQFGCGDEALK 488
G L A + M PDV + + + G +++F G+ +K
Sbjct: 596 GELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIK 638
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 175/330 (53%), Gaps = 11/330 (3%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR++F++I PD W ++ + + E + L+ + D + L AC
Sbjct: 95 ARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTE 154
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
L G ++H ++K+ NV V +L MYAKC + +A VF ++ + V W S
Sbjct: 155 LQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLR-NVVCWTS 212
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+IA ++++ EE LF+RM + + + T+ ++ AC K+++L H + K+G
Sbjct: 213 MIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSG 272
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
+ ++ L+D+Y+KCG + +AR++FN + D+V W+++I+GY G +EAL LF
Sbjct: 273 IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ 332
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN---EYGIIPTREHCSCVVDLL 548
+M+ + + PN VT+ VL+ C GL+E L L R + + GI T + +V +
Sbjct: 333 KMKGVEIKPNCVTIASVLSGC---GLIEN-LELGRSVHGLSIKVGIWDTNV-ANALVHMY 387
Query: 549 ARAGCVHEAEDFINQMACDADIVVWKSLLA 578
A+ +A+ ++ +M + DIV W S+++
Sbjct: 388 AKCYQNRDAK-YVFEMESEKDIVAWNSIIS 416
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 202/442 (45%), Gaps = 48/442 (10%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
++ K +L E LV ++ + N N+ TY LI AC+ L +L G+ H ++ S
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMREN-NVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSG 272
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ L +L+MY KCG + +AR F++ ++V WTAMI G + N N+A+ L+
Sbjct: 273 IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ 332
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + P T S++ C + ++ LGR +H IK +A NAL+ MY K
Sbjct: 333 KMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVA-NALVHMYAKCY 391
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ DA+ VF + KD+ +W S+I+ FS+ G EAL F+ M + + PN S+F
Sbjct: 392 QNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM-NSESVTPNGVTVASLF 450
Query: 246 SACSNF------------------------------------------ARILFNEIDSPD 263
SAC++ AR++F+ I+ +
Sbjct: 451 SACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKN 510
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+W+A+I G + ++ LF EM ++ P+ T S+L AC + +G + S
Sbjct: 511 TITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFS 570
Query: 324 YIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ K F + ++ M A+ L AL + +++ D + + + C H++
Sbjct: 571 SMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRF 630
Query: 383 EELFRLFSRMLASQIKPDHITF 404
+ + +ML + PD ++
Sbjct: 631 DLGEIVIKKML--DLHPDDASY 650
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 283 bits (724), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 184/610 (30%), Positives = 302/610 (49%), Gaps = 47/610 (7%)
Query: 9 LCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQP 68
LC EA+ + S + + + L+ C R+ + G KV+ L S
Sbjct: 69 LCANGKLEEAMKLLN-SMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
V L N L M+ + G+L DA F KM +RN+ SW ++ G ++ ++A+ LY +ML
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 129 Q-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
GV P +TF +++ C G+ + G+++H HV++ + + NALI MY K +
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
AR +F + R+D+ SW +MI+ + + G E L F M + P+ SV SA
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAM-RGLSVDPDLMTLTSVISA 306
Query: 248 CS----------------------------------------NFARILFNEIDSPDLASW 267
C A LF+ ++ D+ SW
Sbjct: 307 CELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSW 366
Query: 268 NALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK 327
+I+G + ++A+ + M + PD +TV ++L AC L G+++H IK
Sbjct: 367 TTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIK 426
Query: 328 MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFR 387
S V V N ++ MY+KC + AL +F + + + +SW SIIA +N+ E
Sbjct: 427 ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIAGLRLNNRCFEAL- 484
Query: 388 LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYI 447
+F R + ++P+ IT + ACA++ +L ++H ++ +TG+ D F+ N L+D+Y+
Sbjct: 485 IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYV 544
Query: 448 KCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVG 507
+CG + +A FN + DV SW+ L+ GY++ G G ++LF RM V P+ +T +
Sbjct: 545 RCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFIS 603
Query: 508 VLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACD 567
+L CS +V +GL + ME +YG+ P +H +CVVDLL RAG + EA FI +M
Sbjct: 604 LLCGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVT 662
Query: 568 ADIVVWKSLL 577
D VW +LL
Sbjct: 663 PDPAVWGALL 672
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/516 (26%), Positives = 245/516 (47%), Gaps = 51/516 (9%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N V KQ ++EA+ Y ++ T+ ++ C + L G++VH H++
Sbjct: 164 NVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVV 223
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D+ + N ++ MY KCG ++ AR+ FD+MP+R+++SW AMI+G +N ++ ++
Sbjct: 224 RYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLE 283
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ M V P T S+I AC LG LGR +HA+VI + + N+L MY
Sbjct: 284 LFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYL 343
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
+A +FS + RKD+ SW +MI+ + +A+ + M+ + +P+E
Sbjct: 344 NAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY-RMMDQDSVKPDEITVA 402
Query: 243 SVFSACSNF---------------ARI-------------------------LFNEIDSP 262
+V SAC+ AR+ +F+ I
Sbjct: 403 AVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK 462
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
++ SW ++IAG+ ++ EA+ +M+ L P+ +T+ + L AC L G ++H
Sbjct: 463 NVISWTSIIAGLRLNNRCFEALIFLRQMK-MTLQPNAITLTAALAACARIGALMCGKEIH 521
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+++++ G + + NA+L MY +C + A F K D SWN ++ + Q
Sbjct: 522 AHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKK--DVTSWNILLTGYSERGQG 579
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT---GLAFDVFVM 439
+ LF RM+ S+++PD ITF ++ C+K +MV Q Y +K G+ ++
Sbjct: 580 SMVVELFDRMVKSRVRPDEITFISLLCGCSKS---QMVRQGLMYFSKMEDYGVTPNLKHY 636
Query: 440 NGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + G L A K M PD W +L+
Sbjct: 637 ACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALL 672
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 175/332 (52%), Gaps = 12/332 (3%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACI 310
A +F ++ +L SWN L+ G A +EAM L+ M + PD T +L C
Sbjct: 148 AWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCG 207
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
G L +G +VH ++++ G++ ++ V NA++TMY KC + +A L+F + + D +SWN
Sbjct: 208 GIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRR-DIISWN 266
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
++I+ ++ E LF M + PD +T V+ AC + + +H Y+ T
Sbjct: 267 AMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITT 326
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
G A D+ V N L +Y+ GS A KLF+ ME D+VSW+++I GY D+A+ +
Sbjct: 327 GFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY 386
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMEN----EYGIIPTREHCSCVVD 546
M V P+ +T+ VL+AC+ +G ++ G+ L+++ Y I+ +++
Sbjct: 387 RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN-----LIN 441
Query: 547 LLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++ C+ +A D + + +++ W S++A
Sbjct: 442 MYSKCKCIDKALDIFHNIP-RKNVISWTSIIA 472
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/515 (25%), Positives = 233/515 (45%), Gaps = 57/515 (11%)
Query: 110 GCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGS 169
G N + +A+KL M + V + F ++++ C + G ++++ + S
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
+ NA +AM+ +F ++DA VF ++ +++ SW ++ ++K GY EA+C ++ ML
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 230 HHGAYQPNEFIFGSVFSACSNF-------------------------------------- 251
G +P+ + F V C
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 252 --ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
AR+LF+ + D+ SWNA+I+G + +E + LF MR + PD +T+ S++ AC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 310 --IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
+G L G +H+Y+I GF ++ VCN++ MY A +F + + D V
Sbjct: 308 ELLGDRRL--GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK-DIV 364
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
SW ++I+ + ++ + M +KPD IT V+ ACA + L+ +LH
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
K L V V N L+++Y KC + A +F+ + +V+SW+S+I G EAL
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACSHVGLV----EEGLHLYRIMENEYGIIPTREHCSC 543
+F R + + PN +TL L AC+ +G + E H+ R +P +
Sbjct: 485 -IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP-----NA 538
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++D+ R G ++ A N D+ W LL
Sbjct: 539 LLDMYVRCGRMNTAWSQFNSQK--KDVTSWNILLT 571
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 188/444 (42%), Gaps = 54/444 (12%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T +ISAC L +LGR +H +++ + D+ + N + MY GS +A F +M
Sbjct: 299 TLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM 358
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++++VSWT MI+G N+ + AI Y M Q V P + T +++ AC+ LG + G
Sbjct: 359 ERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGV 418
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+LH IK+ S++I N LI MY+K I A ++F I RK+V SW S+IA
Sbjct: 419 ELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNN 478
Query: 217 YELEALCHFNEM----------------------------------LHHGA----YQPNE 238
EAL +M L G + PN
Sbjct: 479 RCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA 538
Query: 239 FIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
+ V N A FN D+ SWN L+ G + + + LF M + PD
Sbjct: 539 LLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPD 597
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
+T SLLC C + QG+ S + G N+ ++ + + L A +
Sbjct: 598 EITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQ 657
Query: 359 ELGKNADSVSWNSIIAACLQHNQ-------AEELFRLFSRMLASQIKPDHITFNDVMGAC 411
++ D W +++ AC H++ A+ +F L + + +I ++ C
Sbjct: 658 KMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGY-----YILLCNLYADC 712
Query: 412 AKMASLEMVTQLHCYITKTGLAFD 435
K + V ++ + + GL D
Sbjct: 713 GKWREVAKVRRM---MKENGLTVD 733
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 282 bits (721), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 261/500 (52%), Gaps = 44/500 (8%)
Query: 121 IKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAM 180
+K + M++S V Q TF ++ + S+ LG+Q+H +K L N+LI M
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K + AR VF ++ +D+ SW S+IA ++ G E+EA+C F ++L G +P+++
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG-LKPDQYT 418
Query: 241 FGSVFSACSNF-----------------------------------------ARILFNEI 259
SV A S+ A ILF E
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ER 477
Query: 260 DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
+ DL +WNA++AG + ++ + LF+ M + D T+ ++ C + QG
Sbjct: 478 HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
QVH+Y IK G+D ++ V + IL MY KC + A F + D V+W ++I+ C+++
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI-PVPDDVAWTTMISGCIEN 596
Query: 380 NQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVM 439
+ E F +FS+M + PD T + A + + +LE Q+H K D FV
Sbjct: 597 GEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG 656
Query: 440 NGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVS 499
L+D+Y KCGS+ A LF +E ++ +W+++++G AQ G G E L+LF +M+SLG+
Sbjct: 657 TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIK 716
Query: 500 PNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAED 559
P+ VT +GVL+ACSH GLV E R M +YGI P EH SC+ D L RAG V +AE+
Sbjct: 717 PDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAEN 776
Query: 560 FINQMACDADIVVWKSLLAS 579
I M+ +A ++++LLA+
Sbjct: 777 LIESMSMEASASMYRTLLAA 796
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 152/564 (26%), Positives = 264/564 (46%), Gaps = 37/564 (6%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
+ G + + L LG+ H IL + P+ L N++++MY KCGSL AR FDKMP
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 98 QRNVVSWTAMIAGCSQNYQ---EN--DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
R++VSW +++A +Q+ + EN A L+ + Q V + T ++K C G V
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
H + K AL+ +Y KF ++ + + +F + +DV W M+ A+
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSP---------D 263
++G++ EA+ + H PNE + ARI ++ D+ D
Sbjct: 222 LEMGFKEEAI-DLSSAFHSSGLNPNEITLRLL-------ARISGDDSDAGQVKSFANGND 273
Query: 264 LASWNALI---AGVASHSNANEAMSL---FSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
+S + +I G++ + ++ + +L F++M + ++ D +T +L + +L
Sbjct: 274 ASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLAL 333
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
G QVH +K+G D + V N+++ MY K A VF + + D +SWNS+IA
Sbjct: 334 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSER-DLISWNSVIAGIA 392
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS-LEMVTQLHCYITKTGLAFDV 436
Q+ E LF ++L +KPD T V+ A + + L + Q+H + K D
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS 452
Query: 437 FVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSL 496
FV L+D Y + + A LF N D+V+W++++ GY Q G + LKLF M
Sbjct: 453 FVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQ 511
Query: 497 GVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCV 554
G + TL V C + + +G +H Y I + G S ++D+ + G +
Sbjct: 512 GERSDDFTLATVFKTCGFLFAINQGKQVHAYAI---KSGYDLDLWVSSGILDMYVKCGDM 568
Query: 555 HEAEDFINQMACDADIVVWKSLLA 578
A+ + + D V W ++++
Sbjct: 569 SAAQFAFDSIPVPDD-VAWTTMIS 591
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 203/417 (48%), Gaps = 44/417 (10%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ +++ + SL LG++VH L + + N ++NMY K AR FD M
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS-VCLG 155
+R+++SW ++IAG +QN E +A+ L++Q+L+ G+ P Q+T S++KA S L + L
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLS 436
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+Q+H H IK + S ALI Y++ +R + + D+ +W +M+A +++
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSR-NRCMKEAEILFERHNFDLVAWNAMMAGYTQ- 494
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------------- 249
++ ++H + ++F +VF C
Sbjct: 495 SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWV 554
Query: 250 --------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
+ A+ F+ I PD +W +I+G + A +FS+MR +
Sbjct: 555 SSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGV 614
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
LPD T+ +L A L QG Q+H+ +K+ ++ V +++ MYAKC + +A
Sbjct: 615 LPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYC 674
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
+FK + + + +WN+++ QH + +E +LF +M + IKPD +TF V+ AC+
Sbjct: 675 LFKRI-EMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 118/214 (55%), Gaps = 1/214 (0%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T A + C L ++ G++VH + + S D+ + + IL+MY KCG + A+ FD +
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 578
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P + V+WT MI+GC +N +E A ++ QM GV+P +FT ++ KA S L ++ GR
Sbjct: 579 PVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGR 638
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+HA+ +K + +L+ MY K I DA +F I ++T+W +M+ ++ G
Sbjct: 639 QIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHG 698
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN 250
E L F +M G +P++ F V SACS+
Sbjct: 699 EGKETLQLFKQMKSLG-IKPDKVTFIGVLSACSH 731
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 184/411 (44%), Gaps = 48/411 (11%)
Query: 33 IRPSTYA--GLISACSSL-RSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
++P Y ++ A SSL L L ++VH H + D + +++ Y + +++A
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA 471
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
+ F++ ++V+W AM+AG +Q++ + +KL+ M + G FT ++ K C L
Sbjct: 472 EILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFL 530
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
++ G+Q+HA+ IKS + L + ++ MY K + A+ F I D +W +MI
Sbjct: 531 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMI 590
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA---------------------C 248
+ + G E A F++M G P+EF ++ A C
Sbjct: 591 SGCIENGEEERAFHVFSQMRLMGVL-PDEFTIATLAKASSCLTALEQGRQIHANALKLNC 649
Query: 249 SN-----------FAR--------ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSE 289
+N +A+ LF I+ ++ +WNA++ G+A H E + LF +
Sbjct: 650 TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQ 709
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VHSYIIKMGFDSNVPVCNAILTMYAKCS 348
M+ + PD +T +L AC + + + + S G + + + +
Sbjct: 710 MKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAG 769
Query: 349 VLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP 399
++ A + + + A + + +++AAC E R+ +++L +++P
Sbjct: 770 LVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLL--ELEP 818
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 281 bits (718), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/489 (32%), Positives = 265/489 (54%), Gaps = 34/489 (6%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F + + N++ W M G + + A+KLY+ M+ G++P +TF ++K+C+ +
Sbjct: 91 FKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAF 150
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G+Q+H HV+K L +LI+MY + R+ DA VF +DV S+ ++I +
Sbjct: 151 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGY 210
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIA 272
+ GY +E A+ LF+EI D+ SWNA+I+
Sbjct: 211 ASRGY-IEN------------------------------AQKLFDEIPVKDVVSWNAMIS 239
Query: 273 GVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDS 332
G A N EA+ LF +M + PD T+ +++ AC ++ G QVH +I GF S
Sbjct: 240 GYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGS 299
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N+ + NA++ +Y+KC L A +F+ L D +SWN++I N +E LF M
Sbjct: 300 NLKIVNALIDLYSKCGELETACGLFERL-PYKDVISWNTLIGGYTHMNLYKEALLLFQEM 358
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK--TGLAFDVFVMNGLMDIYIKCG 450
L S P+ +T ++ ACA + ++++ +H YI K G+ + L+D+Y KCG
Sbjct: 359 LRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG 418
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
+ +A ++FN + + + SW+++I G+A G D + LF+RMR +G+ P+ +T VG+L+
Sbjct: 419 DIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 478
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSH G+++ G H++R M +Y + P EH C++DLL +G EAE+ IN M + D
Sbjct: 479 ACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDG 538
Query: 571 VVWKSLLAS 579
V+W SLL +
Sbjct: 539 VIWCSLLKA 547
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 173/346 (50%), Gaps = 33/346 (9%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI 310
+A +F I P+L WN + G A S+ A+ L+ M LLP+ T +L +C
Sbjct: 86 YAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCA 145
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG--------- 361
+G Q+H +++K+G D ++ V ++++MY + L +A VF +
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTA 205
Query: 362 -----------KNA----------DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+NA D VSWN++I+ + +E LF M+ + ++PD
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T V+ ACA+ S+E+ Q+H +I G ++ ++N L+D+Y KCG L +A LF
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 461 FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEE 520
+ DV+SW++LI GY EAL LF M G +PN VT++ +L AC+H+G ++
Sbjct: 326 RLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI 385
Query: 521 G--LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
G +H+Y I + G+ + ++D+ A+ G + A N +
Sbjct: 386 GRWIHVY-IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 181/421 (42%), Gaps = 75/421 (17%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ +C+ ++ + G+++H H+L C D+ + +++MY + G LEDA FDK
Sbjct: 136 TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS 195
Query: 97 PQRNVVS-------------------------------WTAMIAGCSQNYQENDAIKLYI 125
P R+VVS W AMI+G ++ +A++L+
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
M+++ V P + T +++ AC+ GS+ LGRQ+H + GS+L NALI +Y+K
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ A +F + KDV SW ++I ++ + EAL F EML G PN+ S+
Sbjct: 316 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSIL 374
Query: 246 SACSNFARI------------------------------------------LFNEIDSPD 263
AC++ I +FN I
Sbjct: 375 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 434
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
L+SWNA+I G A H A+ + LFS MR + PD +T LL AC L G +
Sbjct: 435 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFR 494
Query: 324 YIIK-MGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ + + ++ + + A + + D V W S++ AC H
Sbjct: 495 TMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNV 554
Query: 383 E 383
E
Sbjct: 555 E 555
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 160/319 (50%), Gaps = 17/319 (5%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + Y EAL + TN+R ST ++SAC+ S++LGR+VH I
Sbjct: 235 NAMISGYAETGNYKEALELFK-DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWID 293
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
++ + N ++++Y KCG LE A F+++P ++V+SW +I G + +A+
Sbjct: 294 DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALL 353
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIA--QNALIAM 180
L+ +ML+SG P T SI+ AC+ LG++ +GR +H ++ K G + + +LI M
Sbjct: 354 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K I A VF+ I K ++SW +MI F+ G + F+ M G QP++
Sbjct: 414 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGI-QPDDIT 472
Query: 241 FGSVFSACS-----NFARILFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEM 290
F + SACS + R +F + +P L + +I + HS + M
Sbjct: 473 FVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI-DLLGHSGLFKEAEEMINM 531
Query: 291 RDRELLPDGLTVHSLLCAC 309
E+ PDG+ SLL AC
Sbjct: 532 --MEMEPDGVIWCSLLKAC 548
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 137/292 (46%), Gaps = 37/292 (12%)
Query: 321 VHSYIIKMGF-DSNVPVCNAI--LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
+H+ +IK+G ++N + I + L A+ VFK + + + + WN++
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI-QEPNLLIWNTMFRGHA 110
Query: 378 QHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVF 437
+ +L+ M++ + P+ TF V+ +CAK + + Q+H ++ K G D++
Sbjct: 111 LSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLY 170
Query: 438 VMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL---------------------- 475
V L+ +Y++ G L A K+F+ + DVVS+++LI
Sbjct: 171 VHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKD 230
Query: 476 ---------GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR 526
GYA+ G EAL+LF M V P+ T+V V++AC+ G +E G ++
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH- 289
Query: 527 IMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +++G + + ++DL ++ G + A ++ D++ W +L+
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY-KDVISWNTLIG 340
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 281 bits (718), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 176/584 (30%), Positives = 295/584 (50%), Gaps = 48/584 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
Y ++ C + +H IL D+ N +LN Y K G +DA FD+M
Sbjct: 51 AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM 110
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+RN VS+ + +Q Y D I LY ++ + G F S +K L +
Sbjct: 111 PERNNVSFVTL----AQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICP 166
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
LH+ ++K + S+ ALI Y+ + AR VF GI KD+ W +++ + + G
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENG 226
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSA-----CSNFAR------------------ 253
Y ++L + M G + PN + F + A +FA+
Sbjct: 227 YFEDSLKLLSCMRMAG-FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG 285
Query: 254 -----------------ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
+FNE+ D+ W+ +IA + NEA+ LF MR+ ++
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVV 345
Query: 297 PDGLTVHSLLCAC-IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ T+ S+L C IG+ + G Q+H ++K+GFD ++ V NA++ +YAKC + A+
Sbjct: 346 PNEFTLSSILNGCAIGKCSGL-GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVK 404
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
+F EL + + VSWN++I + + F +F L +Q+ +TF+ +GACA +A
Sbjct: 405 LFAEL-SSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLA 463
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
S+++ Q+H KT A V V N L+D+Y KCG + A+ +FN ME DV SW++LI
Sbjct: 464 SMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALIS 523
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
GY+ G G +AL++ M+ PN +T +GVL+ CS+ GL+++G + M ++GI
Sbjct: 524 GYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIE 583
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
P EH +C+V LL R+G + +A I + + +++W+++L++
Sbjct: 584 PCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 208/485 (42%), Gaps = 44/485 (9%)
Query: 32 RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+ P + + SL ++ +H I+ + + ++N Y CGS++ AR
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSART 202
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS 151
F+ + +++V W +++ +N D++KL M +G MP +TF + +KA GLG+
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGA 262
Query: 152 VCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAA 211
+ +H ++K+ + L+ +YT+ + DA VF+ + + DV W MIA
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 212 FSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------------- 249
F + G+ EA+ F M PNEF S+ + C+
Sbjct: 323 FCQNGFCNEAVDLFIRM-REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL 381
Query: 250 ------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
+ A LF E+ S + SWN +I G + +A S+F E
Sbjct: 382 DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREAL 441
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
++ +T S L AC ++ G+QVH IK V V N+++ MYAKC +
Sbjct: 442 RNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIK 501
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
A VF E+ + D SWN++I+ H + R+ M KP+ +TF V+ C
Sbjct: 502 FAQSVFNEM-ETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGC 560
Query: 412 AKMASLEMVTQ-LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVS 469
+ ++ + I G+ + ++ + + G L A KL + P V+
Sbjct: 561 SNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMI 620
Query: 470 WSSLI 474
W +++
Sbjct: 621 WRAML 625
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 186/405 (45%), Gaps = 53/405 (13%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ + A L + + VH IL + D + +L +Y + G + DA F++M
Sbjct: 249 TFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEM 308
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+ +VV W+ MIA QN N+A+ L+I+M ++ V+P +FT SI+ C+ LG
Sbjct: 309 PKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGE 368
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
QLH V+K + NALI +Y K +++ A +F+ ++ K+ SW ++I + LG
Sbjct: 369 QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLG 428
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN-------------------------- 250
+A F E L + E F S AC++
Sbjct: 429 EGGKAFSMFREALRN-QVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS 487
Query: 251 --------------FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
FA+ +FNE+++ D+ASWNALI+G ++H +A+ + M+DR+
Sbjct: 488 NSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCK 547
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC----NAILTMYAKCSVLCN 352
P+GLT +L C + QG + +I+ D + C ++ + + L
Sbjct: 548 PNGLTFLGVLSGCSNAGLIDQGQECFESMIR---DHGIEPCLEHYTCMVRLLGRSGQLDK 604
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQI 397
A+ + + + + W ++++A + N E F+R A +I
Sbjct: 605 AMKLIEGIPYEPSVMIWRAMLSASMNQNNEE-----FARRSAEEI 644
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 159/386 (41%), Gaps = 73/386 (18%)
Query: 132 VMPG--QFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK--FDRI 187
++PG +G++++ C + +H ++K L A N L+ Y K FD+
Sbjct: 43 IIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDK- 101
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
DA N+F + ++ S+ ++ GY + LH ++ N +F S
Sbjct: 102 -DALNLFDEMPERNNVSFVTLAQ-----GYACQDPIGLYSRLHREGHELNPHVFTSFLK- 154
Query: 248 CSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLC 307
LF +D ++ W
Sbjct: 155 -------LFVSLDKAEICPW---------------------------------------- 167
Query: 308 ACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSV 367
+HS I+K+G+DSN V A++ Y+ C + +A VF+ + D V
Sbjct: 168 -------------LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGI-LCKDIV 213
Query: 368 SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYI 427
W I++ +++ E+ +L S M + P++ TF+ + A + + + +H I
Sbjct: 214 VWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQI 273
Query: 428 TKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEAL 487
KT D V GL+ +Y + G + A K+FN M DVV WS +I + Q G +EA+
Sbjct: 274 LKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAV 333
Query: 488 KLFTRMRSLGVSPNLVTLVGVLTACS 513
LF RMR V PN TL +L C+
Sbjct: 334 DLFIRMREAFVVPNEFTLSSILNGCA 359
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 125/252 (49%), Gaps = 16/252 (6%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPS-------TYAGLISACSSLRSLQLGRKVH 58
++ C+ NEA+ + IR+R + T + +++ C+ + LG ++H
Sbjct: 320 IARFCQNGFCNEAVDLF--------IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLH 371
Query: 59 DHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
++ D+ + N ++++Y KC ++ A F ++ +N VSW +I G +
Sbjct: 372 GLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGG 431
Query: 119 DAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
A ++ + L++ V + TF S + AC+ L S+ LG Q+H IK+ + + N+LI
Sbjct: 432 KAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLI 491
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
MY K I A++VF+ + DV SW ++I+ +S G +AL +++ +PN
Sbjct: 492 DMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQAL-RILDIMKDRDCKPNG 550
Query: 239 FIFGSVFSACSN 250
F V S CSN
Sbjct: 551 LTFLGVLSGCSN 562
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 10/187 (5%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+ + T++ + AC+SL S+ LG +VH + + V + N +++MY KCG ++ A+
Sbjct: 445 VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQ 504
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F++M +V SW A+I+G S + A+++ M P TF ++ CS G
Sbjct: 505 SVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAG 564
Query: 151 SVCLGRQLHAHVIKSEHG-----SHLIAQNALIAMYTKFDRILDARNVFSGIA-RKDVTS 204
+ G++ +I+ +HG H L+ + D+ A + GI V
Sbjct: 565 LIDQGQECFESMIR-DHGIEPCLEHYTCMVRLLGRSGQLDK---AMKLIEGIPYEPSVMI 620
Query: 205 WGSMIAA 211
W +M++A
Sbjct: 621 WRAMLSA 627
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 135/289 (46%), Gaps = 15/289 (5%)
Query: 295 LLPDGLTVHS---LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
++P GL H+ +L CI + +H I+K G ++ N +L Y K
Sbjct: 43 IIP-GLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDK 101
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+AL +F E+ + ++VS+ ++ Q ++ L+SR+ + + F +
Sbjct: 102 DALNLFDEMPER-NNVSFVTLA----QGYACQDPIGLYSRLHREGHELNPHVFTSFLKLF 156
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ E+ LH I K G + FV L++ Y CGS+ SAR +F + D+V W+
Sbjct: 157 VSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWA 216
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE--EGLHLYRIME 529
++ Y + G +++LKL + MR G PN T L A +G + +G+H +I++
Sbjct: 217 GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVH-GQILK 275
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
Y + P ++ L + G + +A N+M + D+V W ++A
Sbjct: 276 TCYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMPKN-DVVPWSFMIA 321
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 278 bits (712), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 178/588 (30%), Positives = 303/588 (51%), Gaps = 47/588 (7%)
Query: 32 RIRPSTYAGLISACSSLRS-LQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+I + ++ AC+ R L +G KVH I+ D V++ +L MYG+ G+L DA
Sbjct: 97 QISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAE 156
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD MP R++V+W+ +++ C +N + A++++ M+ GV P T S+++ C+ LG
Sbjct: 157 KVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELG 216
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ + R +H + + N+L+ MY+K +L + +F IA+K+ SW +MI+
Sbjct: 217 CLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMIS 276
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI---------------- 254
++++ + +AL F+EM+ G +PN SV S+C I
Sbjct: 277 SYNRGEFSEKALRSFSEMIKSGI-EPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELD 335
Query: 255 ------------LFNE-------------IDSPDLASWNALIAGVASHSNANEAMSLFSE 289
L+ E + ++ +WN+LI+ A +A+ LF +
Sbjct: 336 PNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQ 395
Query: 290 MRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
M + + PD T+ S + AC + G Q+H ++I+ S+ V N+++ MY+K
Sbjct: 396 MVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGS 454
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
+ +A VF ++ K+ V+WNS++ Q+ + E LF M S ++ + +TF V+
Sbjct: 455 VDSASTVFNQI-KHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQ 513
Query: 410 ACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVS 469
AC+ + SLE +H + +GL D+F L+D+Y KCG L +A +F M + +VS
Sbjct: 514 ACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVS 572
Query: 470 WSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME 529
WSS+I Y G A+ F +M G PN V + VL+AC H G VEEG + + +M+
Sbjct: 573 WSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMK 632
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ +G+ P EH +C +DLL+R+G + EA I +M AD VW SL+
Sbjct: 633 S-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLV 679
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 144/574 (25%), Positives = 276/574 (48%), Gaps = 55/574 (9%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLS-KCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
+ Y L +CSSLR L ++H H+L++ + + D + ++ Y GS + +R+ F+
Sbjct: 2 TQYMPLFRSCSSLR---LVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFE 58
Query: 95 KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGS-VC 153
P + + +I + + AI LY +++ +F F S+++AC+G +
Sbjct: 59 AFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLS 118
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
+G ++H +IK + + +L+ MY + + DA VF G+ +D+ +W +++++
Sbjct: 119 VGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCL 178
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA--RI----------------- 254
+ G ++AL F M+ G +P+ SV C+ RI
Sbjct: 179 ENGEVVKALRMFKCMVDDGV-EPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDE 237
Query: 255 ---------------------LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
+F +I + SW A+I+ + +A+ FSEM
Sbjct: 238 TLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKS 297
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN-AILTMYAKCSVLCN 352
+ P+ +T++S+L +C + +G VH + ++ D N + A++ +YA+C L +
Sbjct: 298 GIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSD 357
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
V + + + + V+WNS+I+ + LF +M+ +IKPD T + AC
Sbjct: 358 CETVLRVV-SDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACE 416
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+ + Q+H ++ +T ++ D FV N L+D+Y K GS+ SA +FN +++ VV+W+S
Sbjct: 417 NAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNS 475
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMEN 530
++ G++Q G EA+ LF M + N VT + V+ ACS +G +E+G +H I+
Sbjct: 476 MLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG 535
Query: 531 EYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM 564
+ + ++D+ A+ G ++ AE M
Sbjct: 536 LKDLFTD----TALIDMYAKCGDLNAAETVFRAM 565
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 220/481 (45%), Gaps = 44/481 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T ++ C+ L L++ R VH I D L N +L MY KCG L + F+K+
Sbjct: 204 TMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKI 263
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
++N VSWTAMI+ ++ A++ + +M++SG+ P T S++ +C +G + G+
Sbjct: 264 AKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGK 323
Query: 157 QLHAHVIKSEHGSHLIAQN-ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
+H ++ E + + + AL+ +Y + ++ D V ++ +++ +W S+I+ ++
Sbjct: 324 SVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHR 383
Query: 216 GYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------------ 251
G ++AL F +M+ +P+ F S SAC N
Sbjct: 384 GMVIQALGLFRQMVTQ-RIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQ 442
Query: 252 ---------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELL 296
A +FN+I + +WN+++ G + + N+ EA+SLF M L
Sbjct: 443 NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLE 502
Query: 297 PDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
+ +T +++ AC +L +G VH +I G ++ A++ MYAKC L A V
Sbjct: 503 MNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETV 561
Query: 357 FKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMAS 416
F+ + + +S+I A H + F++M+ S KP+ + F +V+ AC S
Sbjct: 562 FRAMSSRSIVSW-SSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGS 620
Query: 417 LEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN-PDVVSWSSLIL 475
+E + G++ + +D+ + G L A + M D W SL+
Sbjct: 621 VEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVN 680
Query: 476 G 476
G
Sbjct: 681 G 681
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 172/338 (50%), Gaps = 9/338 (2%)
Query: 245 FSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
F + +R++F PD + LI + A+ L+ + S
Sbjct: 46 FMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPS 105
Query: 305 LLCACIG-RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKN 363
+L AC G R L G +VH IIK G D + + ++L MY + L +A VF +
Sbjct: 106 VLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVR 165
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
D V+W++++++CL++ + + R+F M+ ++PD +T V+ CA++ L + +
Sbjct: 166 -DLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSV 224
Query: 424 HCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG 483
H IT+ D + N L+ +Y KCG L S+ ++F + + VSW+++I Y +
Sbjct: 225 HGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFS 284
Query: 484 DEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHC 541
++AL+ F+ M G+ PNLVTL VL++C +GL+ EG +H + + + P E
Sbjct: 285 EKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE---LDPNYESL 341
Query: 542 S-CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
S +V+L A G + + E + ++ D +IV W SL++
Sbjct: 342 SLALVELYAECGKLSDCETVL-RVVSDRNIVAWNSLIS 378
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 174/393 (44%), Gaps = 44/393 (11%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDV-VLQNHILNMYGKCGSLEDA 89
I P+ T ++S+C + ++ G+ VH + + P+ L ++ +Y +CG L D
Sbjct: 299 IEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDC 358
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
+ RN+V+W ++I+ + A+ L+ QM+ + P FT S I AC
Sbjct: 359 ETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENA 418
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
G V LG+Q+H HVI+++ + QN+LI MY+K + A VF+ I + V +W SM+
Sbjct: 419 GLVPLGKQIHGHVIRTDVSDEFV-QNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSML 477
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-------------------- 249
FS+ G +EA+ F+ M +H + NE F +V ACS
Sbjct: 478 CGFSQNGNSVEAISLFDYM-YHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL 536
Query: 250 -------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
N A +F + S + SW+++I H A+S F++M
Sbjct: 537 KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQM 596
Query: 291 RDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVL 350
+ P+ + ++L AC ++ +G + + G N + + ++ L
Sbjct: 597 VESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDL 656
Query: 351 CNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
A KE+ AD+ W S++ C H + +
Sbjct: 657 KEAYRTIKEMPFLADASVWGSLVNGCRIHQKMD 689
>sp|Q9LRV2|PP256_ARATH Pentatricopeptide repeat-containing protein At3g26540
OS=Arabidopsis thaliana GN=PCMP-A5 PE=2 SV=1
Length = 700
Score = 278 bits (711), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 167/601 (27%), Positives = 282/601 (46%), Gaps = 73/601 (12%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMP 97
Y L +CSS + RKV H++ P + L N + YGKCG ++DAR F++MP
Sbjct: 64 YERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMP 123
Query: 98 QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQ 157
+R+ SW A+I C+QN ++ +++ +M + GV + +F ++K+C + + L RQ
Sbjct: 124 ERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQ 183
Query: 158 LHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGY 217
LH V+K + ++ + +++ +Y K + DAR VF I SW ++ + ++G+
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGF 243
Query: 218 ELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------------------- 249
EA+ F +ML +P SV ACS
Sbjct: 244 NDEAVVMFFKMLELNV-RPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVST 302
Query: 250 ------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP 297
AR +F++ S DL SW + ++G A EA LF M +R ++
Sbjct: 303 SVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVS 362
Query: 298 -------------------------------DGLTVHSLLCACIGRLTLYQGMQVHSYII 326
D +T+ +L C G + G Q H +I
Sbjct: 363 WNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIY 422
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
+ G+D+NV V NA+L MY KC L +A + F+++ + D VSWN+++ + ++E+
Sbjct: 423 RHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQAL 482
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
F M + KP T ++ CA + +L + +H ++ + G DV + ++D+Y
Sbjct: 483 SFFEGMQV-EAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMY 541
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KC A ++F D++ W+S+I G + G E +LF + + GV P+ VT +
Sbjct: 542 SKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFL 601
Query: 507 GVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
G+L AC G VE G + M +Y I P EH C+++L + GC+H+ E+F+ M
Sbjct: 602 GILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPF 661
Query: 567 D 567
D
Sbjct: 662 D 662
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 168/367 (45%), Gaps = 41/367 (11%)
Query: 247 ACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
C + AR LF E+ D SWNA+I A + ++E +F M + + +L
Sbjct: 110 GCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVL 169
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
+C L L Q+H ++K G+ NV + +I+ +Y KC V+ +A VF E+ N
Sbjct: 170 KSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI-VNPSD 228
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
VSWN I+ L+ +E +F +ML ++P + T + VM AC++ +LE+ +H
Sbjct: 229 VSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAI 288
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCG--- 483
K + D V + D+Y+KC L SAR++F+ + D+ SW+S + GYA G
Sbjct: 289 AVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREA 348
Query: 484 ----------------------------DEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
DEAL T MR + + VTLV +L CS +
Sbjct: 349 RELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGI 408
Query: 516 GLVEEGLH----LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
V+ G +YR + I+ + ++D+ + G + A + QM+ D V
Sbjct: 409 SDVQMGKQAHGFIYRHGYDTNVIV-----ANALLDMYGKCGTLQSANIWFRQMSELRDEV 463
Query: 572 VWKSLLA 578
W +LL
Sbjct: 464 SWNALLT 470
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 140/274 (51%), Gaps = 3/274 (1%)
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNA 364
L +C + + Q +V S+++ + + N + Y KC + +A +F+E+ +
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPER- 125
Query: 365 DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLH 424
D SWN++I AC Q+ ++E+FR+F RM ++ +F V+ +C + L ++ QLH
Sbjct: 126 DGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLH 185
Query: 425 CYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGD 484
C + K G + +V + ++D+Y KC + AR++F+ + NP VSW+ ++ Y + G D
Sbjct: 186 CAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFND 245
Query: 485 EALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCV 544
EA+ +F +M L V P T+ V+ ACS +E G ++ I + ++ + V
Sbjct: 246 EAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAI-AVKLSVVADTVVSTSV 304
Query: 545 VDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
D+ + + A +Q D+ W S ++
Sbjct: 305 FDMYVKCDRLESARRVFDQTR-SKDLKSWTSAMS 337
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 115/216 (53%), Gaps = 9/216 (4%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T +++ CS + +Q+G++ H I +V++ N +L+MYGKCG+L+ A + F +M
Sbjct: 397 TLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQM 456
Query: 97 PQ-RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ R+ VSW A++ G ++ + A+ + + +Q P ++T +++ C+ + ++ LG
Sbjct: 457 SELRDEVSWNALLTGVARVGRSEQALSFF-EGMQVEAKPSKYTLATLLAGCANIPALNLG 515
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTK---FDRILDARNVFSGIARKDVTSWGSMIAAF 212
+ +H +I+ + ++ + A++ MY+K FD ++ VF A +D+ W S+I
Sbjct: 516 KAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIE---VFKEAATRDLILWNSIIRGC 572
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC 248
+ G E F +L + +P+ F + AC
Sbjct: 573 CRNGRSKEVFELFM-LLENEGVKPDHVTFLGILQAC 607
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 85/158 (53%), Gaps = 3/158 (1%)
Query: 30 NIRIRPSTY--AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLE 87
+ +PS Y A L++ C+++ +L LG+ +H ++ + DVV++ +++MY KC +
Sbjct: 489 QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFD 548
Query: 88 DARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS 147
A F + R+++ W ++I GC +N + + +L++ + GV P TF I++AC
Sbjct: 549 YAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACI 608
Query: 148 GLGSVCLGRQLHAHVIKSEHGSHLIAQ-NALIAMYTKF 184
G V LG Q + + H S + + +I +Y K+
Sbjct: 609 REGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKY 646
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 94/203 (46%), Gaps = 7/203 (3%)
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
++ L+H + + + S + AS + + + +C+ A + ++ ++
Sbjct: 31 TVTRQILEHLEGGNVSKAVSVLFASPEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTF 90
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
+F++N ++ Y KCG + AR+LF M D SW+++I AQ G DE ++F
Sbjct: 91 SPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMF 150
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIME---NEYGIIPTREHCSCVVDL 547
RM GV + GVL +C GL+ + L L R + +YG + + +VD+
Sbjct: 151 RRMNRDGVRATETSFAGVLKSC---GLILD-LRLLRQLHCAVVKYGYSGNVDLETSIVDV 206
Query: 548 LARAGCVHEAEDFINQMACDADI 570
+ + +A +++ +D+
Sbjct: 207 YGKCRVMSDARRVFDEIVNPSDV 229
>sp|Q9C9I6|PP116_ARATH Pentatricopeptide repeat-containing protein At1g71490
OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1
Length = 681
Score = 276 bits (707), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 272/542 (50%), Gaps = 33/542 (6%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A L+SAC +R+ G +VH H + S + VL ++ Y +A+ +
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+ + W +IA ++N + I Y +M+ G+ P FT+ S++KAC V GR +
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVV 166
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H + S + S L NALI+MY +F + AR +F + +D SW ++I ++ G
Sbjct: 167 HGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMW 226
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHS 278
EA F++M G + +WN + G
Sbjct: 227 SEAFELFDKMWFSGV---------------------------EVSVITWNIISGGCLQTG 259
Query: 279 NANEAMSLFSEMRD--RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
N A+ L S MR+ L P + + C+ IG + L G ++H I +D V
Sbjct: 260 NYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRL--GKEIHGLAIHSSYDGIDNV 317
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
N ++TMY+KC L +AL+VF++ +N+ +WNSII+ Q N++EE L ML +
Sbjct: 318 RNTLITMYSKCKDLRHALIVFRQTEENS-LCTWNSIISGYAQLNKSEEASHLLREMLVAG 376
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD-VFVMNGLMDIYIKCGSLGSA 455
+P+ IT ++ CA++A+L+ + HCYI + D + N L+D+Y K G + +A
Sbjct: 377 FQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAA 436
Query: 456 RKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHV 515
+++ + M D V+++SLI GY G G AL LF M G+ P+ VT+V VL+ACSH
Sbjct: 437 KQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHS 496
Query: 516 GLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKS 575
LV EG L+ M+ EYGI P +H SC+VDL RAG + +A+D I+ M W +
Sbjct: 497 KLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWAT 556
Query: 576 LL 577
LL
Sbjct: 557 LL 558
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 190/463 (41%), Gaps = 89/463 (19%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N ++S K L+ E + AY + + IRP TY ++ AC + GR VH
Sbjct: 113 NVLIASYAKNELFEEVIAAY---KRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
I +S + + + N +++MY + ++ AR FD+M +R+ VSW A+I + ++A
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEA 229
Query: 121 IKLYIQMLQSGVMPGQFTFGSI-----------------------------------IKA 145
+L+ +M SGV T+ I +KA
Sbjct: 230 FELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKA 289
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
CS +G++ LG+++H I S + +N LI MY+K + A VF + +W
Sbjct: 290 CSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTW 349
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI----------- 254
S+I+ +++L EA EML G +QPN S+ C+ A +
Sbjct: 350 NSIISGYAQLNKSEEASHLLREMLVAG-FQPNSITLASILPLCARIANLQHGKEFHCYIL 408
Query: 255 ----------LFNEI--------------------DSPDLASWNALIAGVASHSNANEAM 284
L+N + D ++ +LI G + A+
Sbjct: 409 RRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVAL 468
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC----NAI 340
+LF EM + PD +TV ++L AC +++G ++ +KM + + C + +
Sbjct: 469 ALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERL---FMKMQCEYGIRPCLQHFSCM 525
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ +Y + L A + + +W +++ AC H +
Sbjct: 526 VDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQ 568
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 173/569 (30%), Positives = 288/569 (50%), Gaps = 45/569 (7%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCG-SLEDARMGFDKMPQRNVVSWTAMIAGCS 112
G+++H +L + D L+ +++MY K G S++ R+ + + NVV W MI G
Sbjct: 189 GKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFG 248
Query: 113 QNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLI 172
+ ++ LY+ + V +F + ACS + GRQ+H V+K +
Sbjct: 249 GSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPY 308
Query: 173 AQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG 232
+L++MY+K + +A VFS + K + W +M+AA+++ Y AL F M
Sbjct: 309 VCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFM-RQK 367
Query: 233 AYQPNEFIFGSVFSACS-----NFAR---------------------------------- 253
+ P+ F +V S CS N+ +
Sbjct: 368 SVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDA 427
Query: 254 -ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE--LLPDGLTVHSLLCACI 310
++F ++ D+ +W +LI+G+ + EA+ +F +M+D + L PD + S+ AC
Sbjct: 428 YLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACA 487
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
G L G+QVH +IK G NV V ++++ +Y+KC + AL VF + + V+WN
Sbjct: 488 GLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSM-STENMVAWN 546
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
S+I+ ++N E LF+ ML+ I PD ++ V+ A + ASL LH Y +
Sbjct: 547 SMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRL 606
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
G+ D + N L+D+Y+KCG A +F M++ +++W+ +I GY G AL LF
Sbjct: 607 GIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLF 666
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
M+ G SP+ VT + +++AC+H G VEEG +++ M+ +YGI P EH + +VDLL R
Sbjct: 667 DEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGR 726
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
AG + EA FI M +AD +W LL++
Sbjct: 727 AGLLEEAYSFIKAMPIEADSSIWLCLLSA 755
Score = 222 bits (566), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 173/628 (27%), Positives = 293/628 (46%), Gaps = 66/628 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N + +L ++ Y +AL Y ++ T+ L+ ACS+L +L G+ +H ++
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ-------RNVVSWTAMIAGCSQNY 115
+ + D + ++NMY KCG L+ A FD Q R+V W +MI G +
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFR 147
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL--GRQLHAHVIKSEHGSHLIA 173
+ + + + +ML GV P F+ ++ G+ G+Q+H ++++ +
Sbjct: 148 RFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFL 207
Query: 174 QNALIAMYTKFDRILDARNVFSGIARK-DVTSWGSMIAAFS------------------- 213
+ ALI MY KF +DA VF I K +V W MI F
Sbjct: 208 KTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNS 267
Query: 214 -KL------------------GYELEALCHFNEM-LHHGAYQPNEFIFGSVFSACS--NF 251
KL G+ + C +M LH+ Y + S++S C
Sbjct: 268 VKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLL--SMYSKCGMVGE 325
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
A +F+ + L WNA++A A + A+ LF MR + +LPD T+ +++ +C
Sbjct: 326 AETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVI-SCCS 384
Query: 312 RLTLYQ-GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
L LY G VH+ + K S + +A+LT+Y+KC +A LVFK + + D V+W
Sbjct: 385 VLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSM-EEKDMVAWG 443
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQ--IKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
S+I+ ++ + +E ++F M +KPD V ACA + +L Q+H +
Sbjct: 444 SLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMI 503
Query: 429 KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
KTGL +VFV + L+D+Y KCG A K+F M ++V+W+S+I Y++ + ++
Sbjct: 504 KTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSID 563
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGIIPTREHC-SCVV 545
LF M S G+ P+ V++ VL A S + +G LH Y + IP+ H + ++
Sbjct: 564 LFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLG----IPSDTHLKNALI 619
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVW 573
D+ + G AE+ +M ++ W
Sbjct: 620 DMYVKCGFSKYAENIFKKMQ-HKSLITW 646
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 205/435 (47%), Gaps = 43/435 (9%)
Query: 18 ALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHIL 77
+L Y ++NN+ +++ +++ G + ACS + GR++H ++ D + +L
Sbjct: 256 SLDLYMLAKNNS-VKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLL 314
Query: 78 NMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQF 137
+MY KCG + +A F + + + W AM+A ++N A+ L+ M Q V+P F
Sbjct: 315 SMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSF 374
Query: 138 TFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
T ++I CS LG G+ +HA + K S ++AL+ +Y+K DA VF +
Sbjct: 375 TLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSM 434
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEML-HHGAYQPNEFIFGSVFSACSNFARI-- 254
KD+ +WGS+I+ K G EAL F +M + +P+ I SV +AC+ +
Sbjct: 435 EEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRF 494
Query: 255 --------------------------------------LFNEIDSPDLASWNALIAGVAS 276
+F + + ++ +WN++I+ +
Sbjct: 495 GLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSR 554
Query: 277 HSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPV 336
++ ++ LF+ M + + PD +++ S+L A +L +G +H Y +++G S+ +
Sbjct: 555 NNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHL 614
Query: 337 CNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
NA++ MY KC A +FK++ ++ ++WN +I H LF M +
Sbjct: 615 KNALIDMYVKCGFSKYAENIFKKM-QHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAG 673
Query: 397 IKPDHITFNDVMGAC 411
PD +TF ++ AC
Sbjct: 674 ESPDDVTFLSLISAC 688
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 153/323 (47%), Gaps = 6/323 (1%)
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT---VHSLLCACIGRLTL 315
+ + D+ WN++I G E + F M + PD + V S++C G
Sbjct: 128 VSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK-EGNFRR 186
Query: 316 YQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAA 375
+G Q+H ++++ D++ + A++ MY K + +A VF E+ ++ V WN +I
Sbjct: 187 EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
Query: 376 CLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFD 435
E L+ + +K +F +GAC++ + Q+HC + K GL D
Sbjct: 247 FGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHND 306
Query: 436 VFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRS 495
+V L+ +Y KCG +G A +F+ + + + W++++ YA+ G AL LF MR
Sbjct: 307 PYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQ 366
Query: 496 LGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVH 555
V P+ TL V++ CS +GL G ++ + I T S ++ L ++ GC
Sbjct: 367 KSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR-PIQSTSTIESALLTLYSKCGCDP 425
Query: 556 EAEDFINQMACDADIVVWKSLLA 578
+A M + D+V W SL++
Sbjct: 426 DAYLVFKSME-EKDMVAWGSLIS 447
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/540 (30%), Positives = 274/540 (50%), Gaps = 65/540 (12%)
Query: 74 NHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVM 133
N +L+ Y K G ++ FD++PQR+ VSWT MI G Q + AI++ M++ G+
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 134 PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNV 193
P QFT +++ + + + G+++H+ ++K ++ N+L+ MY K + A+ V
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 194 FSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR 253
F + +D++SW +MIA ++G A+ F +M
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER---------------------- 241
Query: 254 ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGR 312
D+ +WN++I+G A+ +FS+M RD L PD T+ S+L AC
Sbjct: 242 ---------DIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANL 292
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG----------- 361
L G Q+HS+I+ GFD + V NA+++MY++C + A + ++ G
Sbjct: 293 EKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTA 352
Query: 362 ---------------------KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
K+ D V+W ++I QH E LF M+ +P+
Sbjct: 353 LLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPN 412
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T ++ + +ASL Q+H K+G + V V N L+ +Y K G++ SA + F+
Sbjct: 413 SYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFD 472
Query: 461 FME-NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
+ D VSW+S+I+ AQ G +EAL+LF M G+ P+ +T VGV +AC+H GLV
Sbjct: 473 LIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVN 532
Query: 520 EGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+G + +M++ IIPT H +C+VDL RAG + EA++FI +M + D+V W SLL++
Sbjct: 533 QGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
Score = 172 bits (437), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 144/586 (24%), Positives = 236/586 (40%), Gaps = 147/586 (25%)
Query: 35 PSTYAGLISACSSLRSLQLGRK--------VHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
P + + L+ C++L + + VH ++ S V L N+++N+Y K G
Sbjct: 6 PLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYA 65
Query: 87 EDARMGFDKMPQRNV-------------------------------VSWTAMIAGCSQNY 115
AR FD+MP R VSWT MI G
Sbjct: 66 LHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIG 125
Query: 116 QENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
Q + AI++ M++ G+ P QFT +++ + + + G+++H+ ++K ++ N
Sbjct: 126 QYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSN 185
Query: 176 ALIAMYTK----------FDRILDARNV----------------------FSGIARKDVT 203
+L+ MY K FDR++ R++ F +A +D+
Sbjct: 186 SLLNMYAKCGDPMMAKFVFDRMV-VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------ 251
+W SMI+ F++ GY+L AL F++ML P+ F SV SAC+N
Sbjct: 245 TWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH 304
Query: 252 ----------------------------ARILFNEIDSPDLA--SWNALIAGVASHSNAN 281
AR L + + DL + AL+ G + N
Sbjct: 305 IVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMN 364
Query: 282 EAMSLFSEMRDRELL-------------------------------PDGLTVHSLLCACI 310
+A ++F ++DR+++ P+ T+ ++L
Sbjct: 365 QAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVAS 424
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWN 370
+L G Q+H +K G +V V NA++TMYAK + +A F + D+VSW
Sbjct: 425 SLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWT 484
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
S+I A QH AEE LF ML ++PDHIT+ V AC + Q +
Sbjct: 485 SMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDV 544
Query: 431 GLAFDVFVMNGLM-DIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
M D++ + G L A++ M PDVV+W SL+
Sbjct: 545 DKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLL 590
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 197/459 (42%), Gaps = 114/459 (24%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I P+ T ++++ ++ R ++ G+KVH I+ + +V + N +LNMY KCG A+
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 91 MGFDKM-------------------------------PQRNVVSWTAMIAGCSQNYQEND 119
FD+M +R++V+W +MI+G +Q +
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261
Query: 120 AIKLYIQMLQSGVM-PGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
A+ ++ +ML+ ++ P +FT S++ AC+ L +C+G+Q+H+H++ + I NALI
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321
Query: 179 AMYTK-----------------------FDRILD----------ARNVFSGIARKDVTSW 205
+MY++ F +LD A+N+F + +DV +W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF------------------------ 241
+MI + + G EA+ F M+ G +PN +
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVG-GGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 242 --GSVFSACSNFARIL--------------FNEID-SPDLASWNALIAGVASHSNANEAM 284
G ++S + A I F+ I D SW ++I +A H +A EA+
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500
Query: 285 SLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCN---AIL 341
LF M L PD +T + AC + QG Q + + D +P + ++
Sbjct: 501 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSHYACMV 558
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
++ + +L A +++ D V+W S+++AC H
Sbjct: 559 DLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHK 597
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 127/326 (38%), Gaps = 88/326 (26%)
Query: 311 GRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG--------- 361
GR T VH +IK G +V + N ++ +Y+K +A +F E+
Sbjct: 29 GRFT---AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNT 85
Query: 362 ---------------------KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
DSVSW ++I Q + R+ M+ I+P
Sbjct: 86 VLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPT 145
Query: 401 HITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN 460
T +V+ + A +E ++H +I K GL +V V N L+++Y KCG A+ +F+
Sbjct: 146 QFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFD 205
Query: 461 F-------------------------------MENPDVVSWSSLILGYAQFGCGDEALKL 489
M D+V+W+S+I G+ Q G AL +
Sbjct: 206 RMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDI 265
Query: 490 FTRM-RSLGVSPNLVTLVGVLTACS-----------HVGLVEEGLHLYRIMENEYGIIPT 537
F++M R +SP+ TL VL+AC+ H +V G + I+ N
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLN------- 318
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQ 563
++ + +R G V A I Q
Sbjct: 319 -----ALISMYSRCGGVETARRLIEQ 339
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 33/187 (17%)
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFM-------------------- 462
+HC + K+GL F V++MN LM++Y K G ARKLF+ M
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 463 -----------ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
D VSW+++I+GY G +A+++ M G+ P TL VL +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
+ +E G ++ + + G+ + ++++ A+ G A+ ++M DI
Sbjct: 156 VAATRCMETGKKVHSFIV-KLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVV-RDIS 213
Query: 572 VWKSLLA 578
W +++A
Sbjct: 214 SWNAMIA 220
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 174/572 (30%), Positives = 287/572 (50%), Gaps = 58/572 (10%)
Query: 54 GRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQ 113
RKV+D + + V N +++ + K G + AR FD MP R VV+WT ++ ++
Sbjct: 67 ARKVYDEM----PHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYAR 122
Query: 114 NYQENDAIKLYIQMLQSG--VMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK--SEHGS 169
N ++A KL+ QM +S +P TF +++ C+ Q+HA +K +
Sbjct: 123 NSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNP 182
Query: 170 HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEML 229
L N L+ Y + R+ A +F I KD ++ ++I + K G E++ F +M
Sbjct: 183 FLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMR 242
Query: 230 HHGAYQPNEFIFGSVFSAC---SNFA---------------------------------- 252
G +QP++F F V A +FA
Sbjct: 243 QSG-HQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRV 301
Query: 253 ---RILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR----DRELLPDGLTVHSL 305
R+LF+E+ D S+N +I+ + ++ F EM+ DR P ++
Sbjct: 302 LETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFP----FATM 357
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
L +L G Q+H + DS + V N+++ MYAKC + A L+FK L +
Sbjct: 358 LSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRT- 416
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
+VSW ++I+ +Q +LF++M S ++ D TF V+ A A ASL + QLH
Sbjct: 417 TVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHA 476
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
+I ++G +VF +GL+D+Y KCGS+ A ++F M + + VSW++LI +A G G+
Sbjct: 477 FIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEA 536
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
A+ F +M G+ P+ V+++GVLTACSH G VE+G ++ M YGI P ++H +C++
Sbjct: 537 AIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACML 596
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
DLL R G EAE +++M + D ++W S+L
Sbjct: 597 DLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 146/286 (51%), Gaps = 14/286 (4%)
Query: 34 RPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGF 93
R +A ++S ++L SLQ+GR++H LL+ + + N +++MY KC E+A + F
Sbjct: 350 RNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIF 409
Query: 94 DKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVC 153
+PQR VSWTA+I+G Q +KL+ +M S + Q TF +++KA + S+
Sbjct: 410 KSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLL 469
Query: 154 LGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
LG+QLHA +I+S + ++ + + L+ MY K I DA VF + ++ SW ++I+A +
Sbjct: 470 LGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHA 529
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEID-----SPD 263
G A+ F +M+ G QP+ V +ACS+ + F + +P
Sbjct: 530 DNGDGEAAIGAFAKMIESG-LQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPK 588
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC 309
+ ++ + + EA L EM PD + S+L AC
Sbjct: 589 KKHYACMLDLLGRNGRFAEAEKLMDEM---PFEPDEIMWSSVLNAC 631
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 187/436 (42%), Gaps = 54/436 (12%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ K LY E++ + + + T++G++ A L LG+++H +
Sbjct: 219 NTLITGYEKDGLYTESIHLF-LKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSV 277
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ D + N IL+ Y K + + RM FD+MP+ + VS+ +I+ SQ Q ++
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLH 337
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ +M G F F +++ + L S+ +GRQLH + + S L N+L+ MY
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYA 397
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K + +A +F + ++ SW ++I+ + + G L F +M + ++ F
Sbjct: 398 KCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM-RGSNLRADQSTFA 456
Query: 243 SVFSACSNFARIL----------------------------------------FNEIDSP 262
+V A ++FA +L F E+
Sbjct: 457 TVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR 516
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG---M 319
+ SWNALI+ A + + A+ F++M + L PD +++ +L AC + QG
Sbjct: 517 NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYF 576
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
Q S I + C +L + + A + E+ D + W+S++ AC H
Sbjct: 577 QAMSPIYGITPKKKHYAC--MLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIH 634
Query: 380 -NQ------AEELFRL 388
NQ AE+LF +
Sbjct: 635 KNQSLAERAAEKLFSM 650
Score = 39.7 bits (91), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 422 QLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
++ I KTG D N +++ ++ G + +ARK+++ M + + VS +++I G+ + G
Sbjct: 34 RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93
Query: 482 CGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIM 528
A LF M V L+G SH +E L+R M
Sbjct: 94 DVSSARDLFDAMPDRTVV-TWTILMGWYARNSH---FDEAFKLFRQM 136
>sp|Q9SJ73|PP148_ARATH Pentatricopeptide repeat-containing protein At2g04860
OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3
Length = 692
Score = 270 bits (689), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 173/574 (30%), Positives = 278/574 (48%), Gaps = 36/574 (6%)
Query: 41 LISACSSLRSLQLG-RKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR 99
L + +S S +L +V H+ S V ++ +LN+Y K G + A+M FD+MP+R
Sbjct: 55 LQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPER 114
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
+ V W A+I G S+N E DA KL+I MLQ G P T +++ C G V GR +H
Sbjct: 115 DTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVH 174
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
KS +NALI+ Y+K + A +F + K SW +MI A+S+ G +
Sbjct: 175 GVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQE 234
Query: 220 EALCHFNEMLH----------------HGAYQP-----------------NEFIFGSVFS 246
EA+ F M H +++P +
Sbjct: 235 EAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRC 294
Query: 247 ACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLL 306
C A L+ + ++++ A + + A+ FS+ R + D + + +L
Sbjct: 295 GCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGIL 354
Query: 307 CACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
C + GM +H Y IK G + V N ++TMY+K + L +F++L +
Sbjct: 355 HGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQL-QETPL 413
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRM-LASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
+SWNS+I+ C+Q +A F +F +M L + PD IT ++ C+++ L + +LH
Sbjct: 414 ISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHG 473
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
Y + + FV L+D+Y KCG+ A +F ++ P +W+S+I GY+ G
Sbjct: 474 YTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHR 533
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
AL + MR G+ P+ +T +GVL+AC+H G V+EG +R M E+GI PT +H + +V
Sbjct: 534 ALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMV 593
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
LL RA EA I +M D VW +LL++
Sbjct: 594 GLLGRACLFTEALYLIWKMDIKPDSAVWGALLSA 627
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/532 (22%), Positives = 230/532 (43%), Gaps = 71/532 (13%)
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS-GLGSVCLG-R 156
R++ + +++ C + I ++ +L+S + P FT ++A + S L
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+ H+ KS + + +L+ +Y K + A+ +F + +D W ++I +S+ G
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 217 YELEALCHFNEMLHHGAYQP---------------------------------------- 236
YE +A F ML G + P
Sbjct: 131 YECDAWKLFIVMLQQG-FSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 237 NEFIFGSVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRE 294
N I S +S C+ A +LF E+ SWN +I + EA+++F M ++
Sbjct: 190 NALI--SFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKN 247
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
+ +T+ +LL A + L H ++K G +++ V +++ Y++C L +A
Sbjct: 248 VEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAE 301
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKM 414
++ K V SI++ + + FS+ +K D + ++ C K
Sbjct: 302 RLYAS-AKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKS 360
Query: 415 ASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLI 474
+ +++ LH Y K+GL V+NGL+ +Y K + + LF ++ ++SW+S+I
Sbjct: 361 SHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVI 420
Query: 475 LGYAQFGCGDEALKLFTRMR-SLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRI---M 528
G Q G A ++F +M + G+ P+ +T+ +L CS + + G LH Y +
Sbjct: 421 SGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF 480
Query: 529 ENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQM--ACDADIVVWKSLLA 578
ENE + C+ ++D+ A+ G +AE + C A W S+++
Sbjct: 481 ENENFV------CTALIDMYAKCGNEVQAESVFKSIKAPCTA---TWNSMIS 523
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 177/416 (42%), Gaps = 47/416 (11%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T L+ C + GR VH S + D ++N +++ Y KC L A + F +
Sbjct: 152 TTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFRE 211
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
M ++ VSW MI SQ+ + +AI ++ M + V T +++ A
Sbjct: 212 MKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS------H 265
Query: 156 RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
LH V+K + + +L+ Y++ ++ A +++ + + S+++ +++
Sbjct: 266 EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEK 325
Query: 216 GYELEALCHFNEM--------------LHHGAYQPNEFIFG------------------- 242
G A+ +F++ + HG + + G
Sbjct: 326 GDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVV 385
Query: 243 -SVFSACSNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR-DREL 295
+ + S F + LF ++ L SWN++I+G A+ A +F +M L
Sbjct: 386 NGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGL 445
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
LPD +T+ SLL C L G ++H Y ++ F++ VC A++ MYAKC A
Sbjct: 446 LPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAES 505
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
VFK + K + +WNS+I+ + M +KPD ITF V+ AC
Sbjct: 506 VFKSI-KAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSAC 560
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 149/311 (47%), Gaps = 19/311 (6%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
++I G++ C + +G +H + + S ++ N ++ MY K +E
Sbjct: 343 MKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVL 402
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGL 149
F+++ + ++SW ++I+GC Q+ + + A +++ QM L G++P T S++ CS L
Sbjct: 403 FLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQL 462
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
+ LG++LH + +++ + ALI MY K + A +VF I +W SMI
Sbjct: 463 CCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMI 522
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA---------RILFNEID 260
+ +S G + AL + EM G +P+E F V SAC++ R + E
Sbjct: 523 SGYSLSGLQHRALSCYLEMREKG-LKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFG 581
Query: 261 -SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGM 319
SP L + ++ + EA+ L +M ++ PD +LL ACI +++ +
Sbjct: 582 ISPTLQHYALMVGLLGRACLFTEALYLIWKM---DIKPDSAVWGALLSACI----IHREL 634
Query: 320 QVHSYIIKMGF 330
+V Y+ + F
Sbjct: 635 EVGEYVARKMF 645
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 270 bits (689), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/489 (31%), Positives = 259/489 (52%), Gaps = 31/489 (6%)
Query: 93 FDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
F + V++W ++I + + A+ +++M SG P F S++K+C+ + +
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
G +H +++ L NAL+ MY K
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKL---------------------------- 153
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFGS--VFSACSNFARILFNEIDSPDLASWNAL 270
+G ++ F+EM + +E + + + R +F + D+ S+N +
Sbjct: 154 LGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTI 213
Query: 271 IAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF 330
IAG A +A+ + EM +L PD T+ S+L + + +G ++H Y+I+ G
Sbjct: 214 IAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGI 273
Query: 331 DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFS 390
DS+V + ++++ MYAK + + ++ VF L D +SWNS++A +Q+ + E RLF
Sbjct: 274 DSDVYIGSSLVDMYAKSARIEDSERVFSRL-YCRDGISWNSLVAGYVQNGRYNEALRLFR 332
Query: 391 RMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCG 450
+M+ +++KP + F+ V+ ACA +A+L + QLH Y+ + G ++F+ + L+D+Y KCG
Sbjct: 333 QMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCG 392
Query: 451 SLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLT 510
++ +ARK+F+ M D VSW+++I+G+A G G EA+ LF M+ GV PN V V VLT
Sbjct: 393 NIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLT 452
Query: 511 ACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADI 570
ACSHVGLV+E + M YG+ EH + V DLL RAG + EA +FI++M +
Sbjct: 453 ACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTG 512
Query: 571 VVWKSLLAS 579
VW +LL+S
Sbjct: 513 SVWSTLLSS 521
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 162/317 (51%), Gaps = 15/317 (4%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N ++ + +Y +AL T+++ T + ++ S + G+++H +++
Sbjct: 211 NTIIAGYAQSGMYEDALRMVR-EMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVI 269
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
DV + + +++MY K +ED+ F ++ R+ +SW +++AG QN + N+A++
Sbjct: 270 RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALR 329
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
L+ QM+ + V PG F S+I AC+ L ++ LG+QLH +V++ GS++ +AL+ MY+
Sbjct: 330 LFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYS 389
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K I AR +F + D SW ++I + G+ EA+ F EM G +PN+ F
Sbjct: 390 KCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV-KPNQVAFV 448
Query: 243 SVFSACSNFARI-----LFNEID-----SPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
+V +ACS+ + FN + + +L + A+ + EA + S+M
Sbjct: 449 AVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMC- 507
Query: 293 RELLPDGLTVHSLLCAC 309
+ P G +LL +C
Sbjct: 508 --VEPTGSVWSTLLSSC 522
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 194/457 (42%), Gaps = 95/457 (20%)
Query: 12 QNLYNEALVAYDFSQNNTNIRIRPS-------TYAGLISACSSLRSLQLGRKVHDHILLS 64
Q+L+++AL ++ + +R S + ++ +C+ + L+ G VH I+
Sbjct: 83 QSLFSKALASF--------VEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRL 134
Query: 65 KCQPDVVLQNHILNMYGKC---GS---------------------------------LED 88
D+ N ++NMY K GS ++
Sbjct: 135 GMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDS 194
Query: 89 ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSG 148
R F+ MP+++VVS+ +IAG +Q+ DA+++ +M + + P FT S++ S
Sbjct: 195 VRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSE 254
Query: 149 LGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
V G+++H +VI+ S + ++L+ MY K RI D+ VFS + +D SW S+
Sbjct: 255 YVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSL 314
Query: 209 IAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF----------------- 251
+A + + G EAL F +M+ +P F SV AC++
Sbjct: 315 VAGYVQNGRYNEALRLFRQMV-TAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGG 373
Query: 252 -----------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFS 288
AR +F+ ++ D SW A+I G A H + +EA+SLF
Sbjct: 374 FGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFE 433
Query: 289 EMRDRELLPDGLTVHSLLCAC--IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAK 346
EM+ + + P+ + ++L AC +G + G +S G + + A+ + +
Sbjct: 434 EMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGY-FNSMTKVYGLNQELEHYAAVADLLGR 492
Query: 347 CSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
L A ++ W++++++C H E
Sbjct: 493 AGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLE 529
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
++ S QLH +T + + ++ IY L A LF +++P V++W
Sbjct: 16 TRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWK 74
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACS 513
S+I + +AL F MR+ G P+ VL +C+
Sbjct: 75 SVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCT 116
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 270 bits (689), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 160/582 (27%), Positives = 295/582 (50%), Gaps = 44/582 (7%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T++ ++ +C+ LR + G +VH ++ + + + V+ + + ++Y KCG ++A F +
Sbjct: 126 TFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSL 185
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+ +SWT MI+ + +A++ Y +M+++GV P +FTF ++ A S LG + G+
Sbjct: 186 QNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGK 244
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+H+++I +++ + +L+ Y++F ++ DA V + +DV W S+++ F +
Sbjct: 245 TIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNL 304
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACS-----NFARIL---------------- 255
EA+ F EM G QPN F + ++ S CS +F + +
Sbjct: 305 RAKEAVGTFLEMRSLG-LQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVG 363
Query: 256 --------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDREL 295
F + SP++ SW LI G+ H + L EM RE+
Sbjct: 364 NALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423
Query: 296 LPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
P+ +T+ +L AC + + +++H+Y+++ D + V N+++ YA + A
Sbjct: 424 EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWN 483
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMA 415
V + + K D++++ S++ + + E + + M I+ D ++ + A A +
Sbjct: 484 VIRSM-KRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLG 542
Query: 416 SLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLIL 475
+LE LHCY K+G + V+N L+D+Y KCGSL A+K+F + PDVVSW+ L+
Sbjct: 543 ALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVS 602
Query: 476 GYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGII 535
G A G AL F MR P+ VT + +L+ACS+ L + GL +++M+ Y I
Sbjct: 603 GLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIE 662
Query: 536 PTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
P EH +V +L RAG + EA + M + +++K+LL
Sbjct: 663 PQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLL 704
Score = 232 bits (592), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 151/578 (26%), Positives = 288/578 (49%), Gaps = 45/578 (7%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
++S C S S ++G +H ++ ++ L N++L++Y K + +AR FD+M R
Sbjct: 30 ILSFCES-NSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRT 88
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
V +WT MI+ +++ + A+ L+ +M+ SG P +FTF S++++C+GL + G ++H
Sbjct: 89 VFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHG 148
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
VIK+ + + ++L +Y+K + +A +FS + D SW MI++ E
Sbjct: 149 SVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWRE 208
Query: 221 ALCHFNEMLHHGAYQPNEFIFGSVFSAC-------------------------------- 248
AL ++EM+ G PNEF F + A
Sbjct: 209 ALQFYSEMVKAGV-PPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVD 267
Query: 249 --SNFARI-----LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
S F+++ + N D+ W ++++G + A EA+ F EMR L P+ T
Sbjct: 268 FYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFT 327
Query: 302 VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV-LCNALLVFKEL 360
++L C +L G Q+HS IK+GF+ + V NA++ MY KCS A VF +
Sbjct: 328 YSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM 387
Query: 361 GKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV 420
+ + VSW ++I + H ++ F L M+ +++P+ +T + V+ AC+K+ + V
Sbjct: 388 -VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRV 446
Query: 421 TQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQF 480
++H Y+ + + ++ V N L+D Y + A + M+ D ++++SL+ + +
Sbjct: 447 LEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNEL 506
Query: 481 GCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
G + AL + M G+ + ++L G ++A +++G +E G HL+ + G
Sbjct: 507 GKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLH-CYSVKSGFSGAASV 565
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ +VD+ ++ G + +A+ ++A D+V W L++
Sbjct: 566 LNSLVDMYSKCGSLEDAKKVFEEIAT-PDVVSWNGLVS 602
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 198/451 (43%), Gaps = 51/451 (11%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILL 63
+SSL + EAL F + P+ T+ L+ A SS L+ G+ +H +I++
Sbjct: 197 ISSLVGARKWREAL---QFYSEMVKAGVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIV 252
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
+VVL+ +++ Y + +EDA + +++V WT++++G +N + +A+
Sbjct: 253 RGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGT 312
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+++M G+ P FT+ +I+ CS + S+ G+Q+H+ IK NAL+ MY K
Sbjct: 313 FLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK 372
Query: 184 FD-RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
++A VF + +V SW ++I G+ + EM+ +PN
Sbjct: 373 CSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR-EVEPNVVTLS 431
Query: 243 SVFSACSNF----------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
V ACS A +L +D ++ N+L+ AS + A ++ M+
Sbjct: 432 GVLRACSKLRHVRRVLEIHAYLLRRHVDG-EMVVGNSLVDAYASSRKVDYAWNVIRSMKR 490
Query: 293 RELLP-------------------------------DGLTVHSLLCACIGRLTLYQGMQV 321
R+ + D L++ + A L G +
Sbjct: 491 RDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHL 550
Query: 322 HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQ 381
H Y +K GF V N+++ MY+KC L +A VF+E+ D VSWN +++ +
Sbjct: 551 HCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVSGLASNGF 609
Query: 382 AEELFRLFSRMLASQIKPDHITFNDVMGACA 412
F M + +PD +TF ++ AC+
Sbjct: 610 ISSALSAFEEMRMKETEPDSVTFLILLSACS 640
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
IR+ + G ISA ++L +L+ G+ +H + + S + N +++MY KCGSLEDA+
Sbjct: 524 IRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAK 583
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACS--- 147
F+++ +VVSW +++G + N + A+ + +M P TF ++ ACS
Sbjct: 584 KVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGR 643
Query: 148 ----GLGSVCLGRQLHAHVIKSEHGSHLIA 173
GL + ++++ + EH HL+
Sbjct: 644 LTDLGLEYFQVMKKIYNIEPQVEHYVHLVG 673
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 268 bits (684), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/534 (31%), Positives = 269/534 (50%), Gaps = 48/534 (8%)
Query: 86 LEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKA 145
+EDA FD+M + + W MI G + +A++ Y +M+ +GV FT+ +IK+
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 146 CSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSW 205
+G+ S+ G+++HA VIK S + N+LI++Y K DA VF + +D+ SW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 206 GSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS---------------- 249
SMI+ + LG +L F EML G ++P+ F S ACS
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCG-FKPDRFSTMSALGACSHVYSPKMGKEIHCHAV 258
Query: 250 -------------------------NFARILFNEIDSPDLASWNALIAGVASHSNANEAM 284
++A +FN + ++ +WN +I A + +A
Sbjct: 259 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 285 SLFSEMRDRE-LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
F +M ++ L PD +T +LL A + +G +H Y ++ GF ++ + A++ M
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLLPAS----AILEGRTIHGYAMRRGFLPHMVLETALIDM 374
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
Y +C L +A ++F + + + +SWNSIIAA +Q+ + LF + S + PD T
Sbjct: 375 YGECGQLKSAEVIFDRMAEK-NVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTT 433
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME 463
++ A A+ SL ++H YI K+ + ++N L+ +Y CG L ARK FN +
Sbjct: 434 IASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL 493
Query: 464 NPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLH 523
DVVSW+S+I+ YA G G ++ LF+ M + V+PN T +L ACS G+V+EG
Sbjct: 494 LKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE 553
Query: 524 LYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
+ M+ EYGI P EH C++DL+ R G A+ F+ +M +W SLL
Sbjct: 554 YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLL 607
Score = 198 bits (504), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 232/477 (48%), Gaps = 40/477 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
TY +I + + + SL+ G+K+H ++ DV + N ++++Y K G DA F++M
Sbjct: 132 TYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM 191
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P+R++VSW +MI+G ++ L+ +ML+ G P +F+ S + ACS + S +G+
Sbjct: 192 PERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251
Query: 157 QLHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKL 215
++H H ++S ++ +++ MY+K+ + A +F+G+ ++++ +W MI +++
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311
Query: 216 GYELEALCHFNEMLHHGAYQPN----------------------------------EFIF 241
G +A F +M QP+ E
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETAL 371
Query: 242 GSVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
++ C A ++F+ + ++ SWN++IA + A+ LF E+ D L+PD
Sbjct: 372 IDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDS 431
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
T+ S+L A L+L +G ++H+YI+K + SN + N+++ MYA C L +A F
Sbjct: 432 TTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNH 491
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-E 418
+ D VSWNSII A H LFS M+AS++ P+ TF ++ AC+ + E
Sbjct: 492 ILLK-DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDE 550
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
+ G+ + ++D+ + G+ +A++ M P W SL+
Sbjct: 551 GWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLL 607
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 14/252 (5%)
Query: 333 NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRM 392
N P L +A ++ +AL +F E+ K AD+ WN +I E + +SRM
Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNK-ADAFLWNVMIKGFTSCGLYIEAVQFYSRM 121
Query: 393 LASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSL 452
+ + +K D T+ V+ + A ++SLE ++H + K G DV+V N L+ +Y+K G
Sbjct: 122 VFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCA 181
Query: 453 GSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTAC 512
A K+F M D+VSW+S+I GY G G +L LF M G P+ + + L AC
Sbjct: 182 WDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC 241
Query: 513 SHVGLVEEGLHLY------RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMAC 566
SHV + G ++ RI + ++ + ++D+ ++ G V AE N M
Sbjct: 242 SHVYSPKMGKEIHCHAVRSRIETGDVMVMTS------ILDMYSKYGEVSYAERIFNGM-I 294
Query: 567 DADIVVWKSLLA 578
+IV W ++
Sbjct: 295 QRNIVAWNVMIG 306
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 78/133 (58%), Gaps = 1/133 (0%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
+T A ++ A + SL GR++H +I+ S+ + ++ N +++MY CG LEDAR F+
Sbjct: 432 TTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNH 491
Query: 96 MPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLG 155
+ ++VVSW ++I + + ++ L+ +M+ S V P + TF S++ ACS G V G
Sbjct: 492 ILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEG 551
Query: 156 RQLHAHVIKSEHG 168
+ + +K E+G
Sbjct: 552 WE-YFESMKREYG 563
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 268 bits (684), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 175/618 (28%), Positives = 303/618 (49%), Gaps = 44/618 (7%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +SS + L N+AL Y F + ST+ L+ AC +L++ + + D +
Sbjct: 107 NSIISSFVRNGLLNQALAFY-FKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVS 165
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
+ + + ++ Y + G ++ FD++ Q++ V W M+ G ++ + IK
Sbjct: 166 SLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIK 225
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
+ M + P TF ++ C+ + LG QLH V+ S +N+L++MY+
Sbjct: 226 GFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYS 285
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG 242
K R DA +F ++R D +W MI+ + + G E+L F EM+ G P+ F
Sbjct: 286 KCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL-PDAITFS 344
Query: 243 SVFSACSNF----------------------------------------ARILFNEIDSP 262
S+ + S F A+ +F++ +S
Sbjct: 345 SLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSV 404
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ + A+I+G + +++ +F + ++ P+ +T+ S+L L L G ++H
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELH 464
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+IIK GFD+ + A++ MYAKC + A +F+ L K D VSWNS+I C Q +
Sbjct: 465 GFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKR-DIVSWNSMITRCAQSDNP 523
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
+F +M S I D ++ + + ACA + S +H ++ K LA DV+ + L
Sbjct: 524 SAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTL 583
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM-RSLGVSPN 501
+D+Y KCG+L +A +F M+ ++VSW+S+I G ++L LF M G+ P+
Sbjct: 584 IDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPD 643
Query: 502 LVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFI 561
+T + ++++C HVG V+EG+ +R M +YGI P +EH +CVVDL RAG + EA + +
Sbjct: 644 QITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETV 703
Query: 562 NQMACDADIVVWKSLLAS 579
M D VW +LL +
Sbjct: 704 KSMPFPPDAGVWGTLLGA 721
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 139/587 (23%), Positives = 261/587 (44%), Gaps = 46/587 (7%)
Query: 35 PSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD 94
P + L+ ACS+ L+ G++VH ++++ D IL MY CGS D F
Sbjct: 35 PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFY 94
Query: 95 KMPQR--NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSV 152
++ R ++ W ++I+ +N N A+ Y +ML GV P TF ++KAC L +
Sbjct: 95 RLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF 154
Query: 153 CLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAF 212
L V + ++LI Y ++ +I +F + +KD W M+ +
Sbjct: 155 KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY 214
Query: 213 SKLGYELEALCHFNEMLHHGAYQPNEFIFG------------------------------ 242
+K G L+++ ++ PN F
Sbjct: 215 AKCG-ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFE 273
Query: 243 --------SVFSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRD 292
S++S C F A LF + D +WN +I+G E+++ F EM
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMIS 333
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
+LPD +T SLL + L Q+H YI++ ++ + +A++ Y KC +
Sbjct: 334 SGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSM 393
Query: 353 ALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACA 412
A +F + + D V + ++I+ L + + +F ++ +I P+ IT ++
Sbjct: 394 AQNIFSQCN-SVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIG 452
Query: 413 KMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSS 472
+ +L++ +LH +I K G + ++D+Y KCG + A ++F + D+VSW+S
Sbjct: 453 ILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNS 512
Query: 473 LILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEY 532
+I AQ A+ +F +M G+ + V++ L+AC+++ G ++ M ++
Sbjct: 513 MITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI-KH 571
Query: 533 GIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ S ++D+ A+ G + A + M + +IV W S++A+
Sbjct: 572 SLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAA 617
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 185/423 (43%), Gaps = 44/423 (10%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + L E+L + + ++ + T++ L+ + S +L+ +++H +I+
Sbjct: 309 NCMISGYVQSGLMEESLTFF-YEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIM 367
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIK 122
D+ L + +++ Y KC + A+ F + +VV +TAMI+G N D+++
Sbjct: 368 RHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLE 427
Query: 123 LYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT 182
++ +++ + P + T SI+ L ++ LGR+LH +IK + A+I MY
Sbjct: 428 MFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYA 487
Query: 183 KFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHG---------- 232
K R+ A +F ++++D+ SW SMI ++ A+ F +M G
Sbjct: 488 KCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISA 547
Query: 233 -----AYQPNEFIFGS-----------------------VFSACSNF--ARILFNEIDSP 262
A P+E FG +++ C N A +F +
Sbjct: 548 ALSACANLPSE-SFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK 606
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRE-LLPDGLTVHSLLCACIGRLTLYQGMQ- 320
++ SWN++IA +H +++ LF EM ++ + PD +T ++ +C + +G++
Sbjct: 607 NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRF 666
Query: 321 VHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
S G ++ ++ + L A K + D+ W +++ AC H
Sbjct: 667 FRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHK 726
Query: 381 QAE 383
E
Sbjct: 727 NVE 729
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 140/287 (48%), Gaps = 5/287 (1%)
Query: 293 RELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCN 352
E +P L++ LL AC L QG QVH+++I + IL MYA C +
Sbjct: 31 EETIPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSD 88
Query: 353 ALLVFKELGKNADSV-SWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+F L S+ WNSII++ +++ + + +ML + PD TF ++ AC
Sbjct: 89 CGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
+ + + + L ++ G+ + FV + L+ Y++ G + KLF+ + D V W+
Sbjct: 149 VALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWN 208
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENE 531
++ GYA+ G D +K F+ MR +SPN VT VL+ C+ L++ G+ L+ ++
Sbjct: 209 VMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS 268
Query: 532 YGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
G+ + ++ + ++ G +A M+ AD V W +++
Sbjct: 269 -GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMIS 313
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 266 bits (681), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 168/586 (28%), Positives = 298/586 (50%), Gaps = 45/586 (7%)
Query: 36 STYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDK 95
S++ L+ AC+ LR ++ G ++H ++ + N +++MY K L AR FD
Sbjct: 183 SSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 242
Query: 96 MPQR-NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCL 154
++ + V W ++++ S + + + ++L+ +M +G P +T S + AC G L
Sbjct: 243 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL 302
Query: 155 GRQLHAHVIKSE-HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFS 213
G+++HA V+KS H S L NALIAMYT+ ++ A + + DV +W S+I +
Sbjct: 303 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 362
Query: 214 KLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL------------------ 255
+ EAL F++M+ G ++ +E S+ +A + +L
Sbjct: 363 QNLMYKEALEFFSDMIAAG-HKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 256 ----------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDR 293
F + DL SW +IAG A + EA+ LF ++ +
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 294 ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNA 353
+ D + + S+L A ++ ++H +I++ G V + N ++ +Y KC + A
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYA 540
Query: 354 LLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAK 413
VF+ + K D VSW S+I++ + E LF RM+ + + D + ++ A A
Sbjct: 541 TRVFESI-KGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 599
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+++L ++HCY+ + G + + ++D+Y CG L SA+ +F+ +E ++ ++S+
Sbjct: 600 LSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSM 659
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I Y GCG A++LF +MR VSP+ ++ + +L ACSH GL++EG +IME+EY
Sbjct: 660 INAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYE 719
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+ P EH C+VD+L RA CV EA +F+ M + VW +LLA+
Sbjct: 720 LEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAA 765
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 167/543 (30%), Positives = 273/543 (50%), Gaps = 56/543 (10%)
Query: 10 CKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPD 69
C + EA D S+NN+ + +A ++ C R++ GR++H I K P
Sbjct: 59 CFDGVLTEAFQRLDVSENNSPV----EAFAYVLELCGKRRAVSQGRQLHSRIF--KTFPS 112
Query: 70 V---VLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
L ++ MYGKCGSL+DA FD+MP R +W MI N + A+ LY
Sbjct: 113 FELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWN 172
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M GV G +F +++KAC+ L + G +LH+ ++K + S NAL++MY K D
Sbjct: 173 MRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDD 232
Query: 187 ILDARNVFSGIARK-DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+ AR +F G K D W S+++++S G LE L F EM H PN + S
Sbjct: 233 LSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREM-HMTGPAPNSYTIVSAL 291
Query: 246 SACSNF-----------------------------------------ARILFNEIDSPDL 264
+AC F A + ++++ D+
Sbjct: 292 TACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADV 351
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLT-LYQGMQVHS 323
+WN+LI G + EA+ FS+M D +++ S++ A GRL+ L GM++H+
Sbjct: 352 VTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAAS-GRLSNLLAGMELHA 410
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
Y+IK G+DSN+ V N ++ MY+KC++ C F + + D +SW ++IA Q++
Sbjct: 411 YVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM-HDKDLISWTTVIAGYAQNDCHV 469
Query: 384 ELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
E LF + +++ D + ++ A + + S+ +V ++HC+I + GL D + N L+
Sbjct: 470 EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELV 528
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
D+Y KC ++G A ++F ++ DVVSW+S+I A G EA++LF RM G+S + V
Sbjct: 529 DVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSV 588
Query: 504 TLV 506
L+
Sbjct: 589 ALL 591
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 174/345 (50%), Gaps = 13/345 (3%)
Query: 239 FIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
F++G S + A +F+E+ +WN +I S+ A++L+ MR E +P
Sbjct: 124 FMYGKCGSL--DDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMR-VEGVPL 180
Query: 299 GLT-VHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF 357
GL+ +LL AC + G ++HS ++K+G+ S + NA+++MYAK L A +F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 358 KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL 417
+ D+V WNSI+++ ++ E LF M + P+ T + AC +
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 418 EMVTQLHCYITKTGL-AFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILG 476
++ ++H + K+ + +++V N L+ +Y +CG + A ++ M N DVV+W+SLI G
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360
Query: 477 YAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIMENEYGI 534
Y Q EAL+ F+ M + G + V++ ++ A + + G LH Y I ++G
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI---KHGW 417
Query: 535 IPTREHCSCVVDLLARAGCV-HEAEDFINQMACDADIVVWKSLLA 578
+ + ++D+ ++ + F+ D D++ W +++A
Sbjct: 418 DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH--DKDLISWTTVIA 460
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 138/278 (49%), Gaps = 18/278 (6%)
Query: 309 CIGRLTLYQGMQVHSYIIKM--GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADS 366
C R + QG Q+HS I K F+ + + ++ MY KC L +A VF E+ + +
Sbjct: 90 CGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVFDEM-PDRTA 147
Query: 367 VSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCY 426
+WN++I A + + + L+ M + +F ++ ACAK+ + ++LH
Sbjct: 148 FAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSL 207
Query: 427 ITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFN-FMENPDVVSWSSLILGYAQFGCGDE 485
+ K G F++N L+ +Y K L +AR+LF+ F E D V W+S++ Y+ G E
Sbjct: 208 LVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLE 267
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH----- 540
L+LF M G +PN T+V LTAC + G ++ ++ + H
Sbjct: 268 TLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH------ASVLKSSTHSSELY 321
Query: 541 -CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
C+ ++ + R G + +AE + QM +AD+V W SL+
Sbjct: 322 VCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 194/441 (43%), Gaps = 61/441 (13%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRN 100
+I+A L +L G ++H +++ ++ + N +++MY KC F +M ++
Sbjct: 392 IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKD 451
Query: 101 VVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHA 160
++SWT +IAG +QN +A++L+ + + + + GSI++A S L S+ + +++H
Sbjct: 452 LISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511
Query: 161 HVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELE 220
H+++ +I QN L+ +Y K + A VF I KDV SW SMI++ + G E E
Sbjct: 512 HILRKGLLDTVI-QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570
Query: 221 ALCHFNEMLHHGAYQPNEFIF------------------------------GSV------ 244
A+ F M+ G + + GS+
Sbjct: 571 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVD 630
Query: 245 -FSACSNF--ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLT 301
++ C + A+ +F+ I+ L + ++I H A+ LF +MR + PD ++
Sbjct: 631 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS 690
Query: 302 VHSLLCACIGRLTLYQG-----MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLV 356
+LL AC L +G + H Y ++ + V ++ M + + + A
Sbjct: 691 FLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV----CLVDMLGRANCVVEAFEF 746
Query: 357 FKELGKNADSVSWNSIIAACLQHNQ-------AEELFRLFSR-----MLASQIKPDHITF 404
K + + W +++AAC H++ A+ L L + +L S + + +
Sbjct: 747 VKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRW 806
Query: 405 NDVMGACAKMASLEMVTQLHC 425
NDV AKM + M C
Sbjct: 807 NDVEKVRAKMKASGMEKHPGC 827
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 2/196 (1%)
Query: 385 LFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDV-FVMNGLM 443
L F R+ S+ F V+ C K ++ QLH I KT +F++ F+ L+
Sbjct: 64 LTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLV 123
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLV 503
+Y KCGSL A K+F+ M + +W+++I Y G AL L+ MR GV L
Sbjct: 124 FMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLS 183
Query: 504 TLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
+ +L AC+ + + G L+ ++ + G T + +V + A+ + A +
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLV-KLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 242
Query: 564 MACDADIVVWKSLLAS 579
D V+W S+L+S
Sbjct: 243 FQEKGDAVLWNSILSS 258
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 266 bits (681), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/598 (29%), Positives = 296/598 (49%), Gaps = 50/598 (8%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
N + Y L + S+ LG+ H H++ S P + L N++LNMY KC L A
Sbjct: 42 NTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFA 101
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
R FD+MP+RN++S+ ++I+G +Q A++L+++ ++ + +FT+ + C
Sbjct: 102 RQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGER 161
Query: 150 GSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMI 209
+ LG LH V+ + + N LI MY+K ++ A ++F +D SW S+I
Sbjct: 162 CDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLI 221
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSAC--------------------- 248
+ + ++G E L +M H + GSV AC
Sbjct: 222 SGYVRVGAAEEPLNLLAKM-HRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAK 280
Query: 249 --------------SNFAR--------ILFNEIDSPDLASWNALIAGV-----ASHSNAN 281
+A+ LF+ + S ++ ++NA+I+G + ++
Sbjct: 281 LGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASS 340
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
EA LF +M+ R L P T +L AC TL G Q+H+ I K F S+ + +A++
Sbjct: 341 EAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALI 400
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
+YA + + F K D SW S+I +Q+ Q E F LF ++ +S I+P+
Sbjct: 401 ELYALMGSTEDGMQCFASTSKQ-DIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEE 459
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
T + +M ACA A+L Q+ Y K+G+ V + +Y K G++ A ++F
Sbjct: 460 YTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIE 519
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
++NPDV ++S++I AQ G +EAL +F M++ G+ PN +GVL AC H GLV +G
Sbjct: 520 VQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQG 579
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
L ++ M+N+Y I P +H +C+VDLL R G + +AE+ I V W++LL+S
Sbjct: 580 LKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSS 637
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 107/212 (50%), Gaps = 9/212 (4%)
Query: 7 SSLCKQNLYNEAL-VAYDFSQNNTNIRIRPSTY--AGLISACSSLRSLQLGRKVHDHILL 63
+S+ ++ NE L A+D + + IRP Y + ++SAC+ +L G ++ + +
Sbjct: 428 TSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIK 487
Query: 64 SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
S ++ ++MY K G++ A F ++ +V +++AMI+ +Q+ N+A+ +
Sbjct: 488 SGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNI 547
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN--ALIAMY 181
+ M G+ P Q F ++ AC G V G + + +K+++ + ++ L+ +
Sbjct: 548 FESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLK-YFQCMKNDYRINPNEKHFTCLVDLL 606
Query: 182 TKFDRILDARNVF--SGIARKDVTSWGSMIAA 211
+ R+ DA N+ SG VT W +++++
Sbjct: 607 GRTGRLSDAENLILSSGFQDHPVT-WRALLSS 637
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 266 bits (681), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 165/581 (28%), Positives = 290/581 (49%), Gaps = 45/581 (7%)
Query: 39 AGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQ 98
A L+ CSSL+ L R++ + + + Q +++++ + GS+++A F+ +
Sbjct: 41 ALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDS 97
Query: 99 RNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQL 158
+ V + M+ G ++ + A++ +++M V P + F ++K C + +G+++
Sbjct: 98 KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 157
Query: 159 HAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYE 218
H ++KS L A L MY K ++ +AR VF + +D+ SW +++A +S+ G
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 219 LEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------------------------- 251
AL M +P+ SV A S
Sbjct: 218 RMALEMVKSMCEEN-LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTA 276
Query: 252 -------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPD 298
AR LF+ + ++ SWN++I + N EAM +F +M D + P
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 336
Query: 299 GLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFK 358
++V L AC L +G +H +++G D NV V N++++MY KC + A +F
Sbjct: 337 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 396
Query: 359 ELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLE 418
+L ++ VSWN++I Q+ + + FS+M + +KPD T+ V+ A A+++
Sbjct: 397 KL-QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITH 455
Query: 419 MVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYA 478
+H + ++ L +VFV L+D+Y KCG++ AR +F+ M V +W+++I GY
Sbjct: 456 HAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515
Query: 479 QFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTR 538
G G AL+LF M+ + PN VT + V++ACSH GLVE GL + +M+ Y I +
Sbjct: 516 THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSM 575
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
+H +VDLL RAG ++EA DFI QM + V+ ++L +
Sbjct: 576 DHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGA 616
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/514 (23%), Positives = 228/514 (44%), Gaps = 79/514 (15%)
Query: 4 DYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHI 61
+ V S+C++NL +PS T ++ A S+LR + +G+++H +
Sbjct: 222 EMVKSMCEENL-------------------KPSFITIVSVLPAVSALRLISVGKEIHGYA 262
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ S V + +++MY KCGSLE AR FD M +RNVVSW +MI QN +A+
Sbjct: 263 MRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAM 322
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMY 181
++ +ML GV P + + AC+ LG + GR +H ++ ++ N+LI+MY
Sbjct: 323 LIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMY 382
Query: 182 TKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIF 241
K + A ++F + + + SW +MI F++ G ++AL +F++M +P+ F +
Sbjct: 383 CKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM-RSRTVKPDTFTY 441
Query: 242 GSVFSACSNF----------------------------------------ARILFNEIDS 261
SV +A + AR++F+ +
Sbjct: 442 VSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSE 501
Query: 262 PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQG--- 318
+ +WNA+I G +H A+ LF EM+ + P+G+T S++ AC + G
Sbjct: 502 RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKC 561
Query: 319 --MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAAC 376
M +Y I++ D A++ + + L A ++ + +++ AC
Sbjct: 562 FYMMKENYSIELSMDH----YGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGAC 617
Query: 377 LQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASL-EMVTQLHCYITKTGLAFD 435
H + R+ ++ PD ++ ++ + AS+ E V Q+ + + GL
Sbjct: 618 QIHKNVNFAEKAAERLF--ELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKT 675
Query: 436 -----VFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
V + N + + + ++K++ F+E
Sbjct: 676 PGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEK 709
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 265 bits (677), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 166/541 (30%), Positives = 261/541 (48%), Gaps = 44/541 (8%)
Query: 82 KCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGS 141
K S DAR F +M +R++ W ++ S+ Q + + + M + P FT
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 142 IIKACSGLGSVCLGRQLHAHVIKS-EHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
+KAC L V G +H V K GS L ++LI MY K R+++A +F + +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA--RI---- 254
D+ +W SM++ F K G +A+ F M+ P+ ++ SAC+ + R+
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 255 ----------------------------------LFNEIDSPDLASWNALIAGVASHSNA 280
LF I D+ SW+ +IA + A
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 281 NEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAI 340
EA+ +F++M D P+ TV +L AC L QG + H I+ G ++ V V A+
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTAL 305
Query: 341 LTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRML-ASQIKP 399
+ MY KC A VF + + D VSW ++I+ + A FS ML + +P
Sbjct: 306 VDMYMKCFSPEEAYAVFSRIPRK-DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRP 364
Query: 400 DHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLF 459
D I V+G+C+++ LE H Y+ K G + F+ L+++Y +CGSLG+A K+F
Sbjct: 365 DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF 424
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM-RSLGVSPNLVTLVGVLTACSHVGLV 518
N + D V W+SLI GY G G +AL+ F M +S V PN VT + +L+ACSH GL+
Sbjct: 425 NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLI 484
Query: 519 EEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
EGL ++++M N+Y + P EH + +VDLL R G + A + +M + +LL
Sbjct: 485 HEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLG 544
Query: 579 S 579
+
Sbjct: 545 A 545
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 218/456 (47%), Gaps = 51/456 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLIS--ACSSLRSLQLGRKVHDH 60
N + SL ++ + E L Y FS + +P + ++ AC LR + G +H
Sbjct: 29 NTLLKSLSREKQWEEVL--YHFSHMFRDEE-KPDNFTLPVALKACGELREVNYGEMIHGF 85
Query: 61 ILLS-KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEND 119
+ D+ + + ++ MY KCG + +A FD++ + ++V+W++M++G +N
Sbjct: 86 VKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQ 145
Query: 120 AIKLYIQM-LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
A++ + +M + S V P + T +++ AC+ L + LGR +H VI+ + L N+L+
Sbjct: 146 AVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLL 205
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
Y K +A N+F IA KDV SW ++IA + + G EAL FN+M+ G +PN
Sbjct: 206 NCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT-EPNV 264
Query: 239 FIFGSVFSACS----------------------------------------NFARILFNE 258
V AC+ A +F+
Sbjct: 265 ATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSR 324
Query: 259 IDSPDLASWNALIAGVASHSNANEAMSLFSEM-RDRELLPDGLTVHSLLCACIGRLTLYQ 317
I D+ SW ALI+G + A+ ++ FS M + PD + + +L +C L Q
Sbjct: 325 IPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQ 384
Query: 318 GMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACL 377
HSY+IK GFDSN + +++ +Y++C L NA VF + D+V W S+I
Sbjct: 385 AKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK-DTVVWTSLITGYG 443
Query: 378 QHNQAEELFRLFSRML-ASQIKPDHITFNDVMGACA 412
H + + F+ M+ +S++KP+ +TF ++ AC+
Sbjct: 444 IHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS 479
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 155/305 (50%), Gaps = 17/305 (5%)
Query: 17 EALVAY-DFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH 75
EAL+ + D + T + +T ++ AC++ L+ GRK H+ + + +V +
Sbjct: 247 EALLVFNDMMDDGTEPNV--ATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTA 304
Query: 76 ILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY-IQMLQSGVMP 134
+++MY KC S E+A F ++P+++VVSW A+I+G + N + +I+ + I +L++ P
Sbjct: 305 LVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRP 364
Query: 135 GQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVF 194
++ +CS LG + + H++VIK S+ +L+ +Y++ + +A VF
Sbjct: 365 DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF 424
Query: 195 SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFA-- 252
+GIA KD W S+I + G +AL FN M+ +PNE F S+ SACS+
Sbjct: 425 NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLI 484
Query: 253 -------RILFNEID-SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHS 304
+++ N+ +P+L + L+ + + + A+ + M P + +
Sbjct: 485 HEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM---PFSPTPQILGT 541
Query: 305 LLCAC 309
LL AC
Sbjct: 542 LLGAC 546
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 264 bits (674), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 165/482 (34%), Positives = 247/482 (51%), Gaps = 47/482 (9%)
Query: 139 FGSIIKACSGLGSVCLGRQLHAHVIKS-EHGSHLIAQNALIAMYTKFDRILDARNVFSGI 197
G ++K S+ LGR +HA ++K+ + N LI MY+K D AR V
Sbjct: 9 LGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLT 68
Query: 198 ARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFG--------------- 242
++V SW S+I+ ++ G+ AL F EM G PN+F F
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV-PNDFTFPCAFKAVASLRLPVTG 127
Query: 243 --------------SVFSACSNF-----------ARILFNEIDSPDLASWNALIAGVASH 277
VF CS F AR LF+EI +L +WNA I+ +
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 278 SNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVC 337
EA+ F E R + P+ +T + L AC L L GMQ+H +++ GFD++V VC
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVC 247
Query: 338 NAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQ 396
N ++ Y KC + ++ ++F E+G KNA VSW S++AA +Q+++ E+ L+ R
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFTEMGTKNA--VSWCSLVAAYVQNHEDEKASVLYLRSRKDI 305
Query: 397 IKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSAR 456
++ + V+ ACA MA LE+ +H + K + +FV + L+D+Y KCG + +
Sbjct: 306 VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 365
Query: 457 KLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM--RSLGVSPNLVTLVGVLTACSH 514
+ F+ M ++V+ +SLI GYA G D AL LF M R G +PN +T V +L+ACS
Sbjct: 366 QAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 425
Query: 515 VGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWK 574
G VE G+ ++ M + YGI P EH SC+VD+L RAG V A +FI +M I VW
Sbjct: 426 AGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWG 485
Query: 575 SL 576
+L
Sbjct: 486 AL 487
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 209/478 (43%), Gaps = 47/478 (9%)
Query: 41 LISACSSLRSLQLGRKVHDHILLS-KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR 99
L+ S S++LGR VH I+ + P L N+++NMY K E AR+ P R
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
NVVSWT++I+G +QN + A+ + +M + GV+P FTF KA + L G+Q+H
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
A +K + + MY K DAR +F I +++ +W + I+ G
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------------- 251
EA+ F E + PN F + +ACS++
Sbjct: 192 EAIEAFIEFRRIDGH-PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 252 ------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
+ I+F E+ + + SW +L+A + +A L+ R +
Sbjct: 251 IDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 310
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+ S+L AC G L G +H++ +K + + V +A++ MY KC + ++ F E
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE 370
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLAS--QIKPDHITFNDVMGACAKMASL 417
+ + + V+ NS+I Q + LF M P+++TF ++ AC++ ++
Sbjct: 371 MPEK-NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAV 429
Query: 418 EMVTQLHCYITKT-GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFME-NPDVVSWSSL 473
E ++ + T G+ + ++D+ + G + A + M P + W +L
Sbjct: 430 ENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 140/305 (45%), Gaps = 29/305 (9%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ ++ACS L LG ++H +L S DV + N +++ YGKC + + + F +M
Sbjct: 211 TFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM 270
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+N VSW +++A QN+++ A LY++ + V F S++ AC+G+ + LGR
Sbjct: 271 GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGR 330
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
+HAH +K+ + +AL+ MY K I D+ F + K++ + S+I ++ G
Sbjct: 331 SIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQG 390
Query: 217 YELEALCHFNEMLHHG-AYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVA 275
AL F EM G PN F S+ SACS AG
Sbjct: 391 QVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR---------------------AGAV 429
Query: 276 SHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVP 335
+ M +F MR + G +S + +GR + + + + +I KM +
Sbjct: 430 EN-----GMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVE--RAYEFIKKMPIQPTIS 482
Query: 336 VCNAI 340
V A+
Sbjct: 483 VWGAL 487
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 195/469 (41%), Gaps = 61/469 (13%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+S L + ++ ALV + F + T+ A +SLR G+++H L K
Sbjct: 80 ISGLAQNGHFSTALVEF-FEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH--ALAVK 136
Query: 66 CQP--DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKL 123
C DV + +MY K +DAR FD++P+RN+ +W A I+ + + +AI+
Sbjct: 137 CGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEA 196
Query: 124 YIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+I+ + P TF + + ACS + LG QLH V++S + + N LI Y K
Sbjct: 197 FIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGK 256
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
+I + +F+ + K+ SW S++AA+ + +E E + ++F+ S
Sbjct: 257 CKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQ-NHEDEKASVLYLRSRKDIVETSDFMISS 315
Query: 244 VFSACSNFARI----------------------------------------LFNEIDSPD 263
V SAC+ A + F+E+ +
Sbjct: 316 VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 375
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDR--ELLPDGLTVHSLLCACIGRLTLYQGMQV 321
L + N+LI G A + A++LF EM R P+ +T SLL AC + GM++
Sbjct: 376 LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 435
Query: 322 -HSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHN 380
S G + + I+ M + ++ A K++ W ++ AC H
Sbjct: 436 FDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 495
Query: 381 Q-------AEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
+ AE LF+ L + +H+ ++ A + A V +
Sbjct: 496 KPQLGLLAAENLFK-----LDPKDSGNHVLLSNTFAAAGRWAEANTVRE 539
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 156/331 (47%), Gaps = 11/331 (3%)
Query: 252 ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG 311
AR++ + ++ SW +LI+G+A + + + A+ F EMR ++P+ T A
Sbjct: 61 ARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVAS 120
Query: 312 RLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
G Q+H+ +K G +V V + MY K + +A +F E+ + + +WN+
Sbjct: 121 LRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPER-NLETWNA 179
Query: 372 IIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
I+ + + E F P+ ITF + AC+ L + QLH + ++G
Sbjct: 180 FISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSG 239
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
DV V NGL+D Y KC + S+ +F M + VSW SL+ Y Q ++A L+
Sbjct: 240 FDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYL 299
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHC----SCVVDL 547
R R V + + VL+AC+ + +E G ++ + + E S +VD+
Sbjct: 300 RSRKDIVETSDFMISSVLSACAGMAGLELGRSIH-----AHAVKACVERTIFVGSALVDM 354
Query: 548 LARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ GC+ ++E ++M + ++V SL+
Sbjct: 355 YGKCGCIEDSEQAFDEMP-EKNLVTRNSLIG 384
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 121/282 (42%), Gaps = 16/282 (5%)
Query: 305 LLCACIGRLTLYQGMQVHSYIIKMGFDSNVP--VCNAILTMYAKCSVLCNALLVFKELGK 362
LL I ++ G VH+ I+K DS P + N ++ MY+K +A LV + L
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLR-LTP 69
Query: 363 NADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQ 422
+ VSW S+I+ Q+ F M + P+ TF A A + Q
Sbjct: 70 ARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQ 129
Query: 423 LHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGC 482
+H K G DVFV D+Y K ARKLF+ + ++ +W++ I G
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 483 GDEALKLFTRMRSLGVSPNLVTLVGVLTACS-----HVGLVEEGLHLYRIMENEYGIIPT 537
EA++ F R + PN +T L ACS ++G+ GL L + + +
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV--- 246
Query: 538 REHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
C+ ++D + + +E +M + V W SL+A+
Sbjct: 247 ---CNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAA 284
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 262 bits (670), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 154/536 (28%), Positives = 262/536 (48%), Gaps = 44/536 (8%)
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY--IQMLQSGVMPGQFTFGS 141
G+L AR FDKMP ++VSWT++I ++A+ L+ ++++ V P
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKD 201
++KAC ++ G LHA+ +K+ S + ++L+ MY + +I + VFS + ++
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 202 VTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI------- 254
+W ++I G E L +F+EM + + F AC+ ++
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEM-SRSEELSDTYTFAIALKACAGLRQVKYGKAIH 232
Query: 255 ---------------------------------LFNEIDSPDLASWNALIAGVASHSNAN 281
LF + D+ SW +LI
Sbjct: 233 THVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEV 292
Query: 282 EAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL 341
+A+ F +MR+ ++ P+ T S+ AC L G Q+H ++ +G + ++ V N+++
Sbjct: 293 KAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMM 352
Query: 342 TMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDH 401
MY+ C L +A ++F+ + + D +SW++II Q EE F+ FS M S KP
Sbjct: 353 KMYSTCGNLVSASVLFQGM-RCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTD 411
Query: 402 ITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNF 461
++ MA +E Q+H GL + V + L+++Y KCGS+ A +F
Sbjct: 412 FALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGE 471
Query: 462 MENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG 521
+ D+VS +++I GYA+ G EA+ LF + +G P+ VT + VLTAC+H G ++ G
Sbjct: 472 TDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLG 531
Query: 522 LHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
H + +M+ Y + P +EH C+VDLL RAG + +AE IN+M+ D VVW +LL
Sbjct: 532 FHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLL 587
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 194/434 (44%), Gaps = 53/434 (12%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPS-TYAGLISACSSLRSLQLGRKVHDHILLS 64
++ L Y E L FS+ + + + + T+A + AC+ LR ++ G+ +H H+++
Sbjct: 181 ITGLVHAGRYKEGLTY--FSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVR 238
Query: 65 KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
+ + N + MY +CG ++D F+ M +R+VVSWT++I + QE A++ +
Sbjct: 239 GFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETF 298
Query: 125 IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKF 184
I+M S V P + TF S+ AC+ L + G QLH +V+ L N+++ MY+
Sbjct: 299 IKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTC 358
Query: 185 DRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSV 244
++ A +F G+ +D+ SW ++I + + G+ E +F+ M G +P +F S+
Sbjct: 359 GNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGT-KPTDFALASL 417
Query: 245 FSACSNFARI----------------------------------------LFNEIDSPDL 264
S N A I +F E D D+
Sbjct: 418 LSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDI 477
Query: 265 ASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACI--GRLTL---YQGM 319
S A+I G A H + EA+ LF + PD +T S+L AC G+L L Y M
Sbjct: 478 VSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNM 537
Query: 320 QVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+Y ++ + ++ + + L +A + E+ D V W +++ AC
Sbjct: 538 MQETYNMRPAKEHY----GCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAK 593
Query: 380 NQAEELFRLFSRML 393
E R R+L
Sbjct: 594 GDIERGRRAAERIL 607
>sp|Q9FNN9|PP370_ARATH Putative pentatricopeptide repeat-containing protein At5g08490
OS=Arabidopsis thaliana GN=PCMP-E32 PE=3 SV=1
Length = 849
Score = 262 bits (669), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 174/626 (27%), Positives = 308/626 (49%), Gaps = 83/626 (13%)
Query: 34 RPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL-EDAR 90
+PS T+A ++ C L G+ +H +I+ + + D ++ N +++MY K G + DA
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAY 178
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD + ++VVSW A+IAG S+N DA + + ML+ P T +++ C+ +
Sbjct: 179 TAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMD 238
Query: 151 S--VCL-GRQLHAHVI-KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
C GRQ+H++V+ +S +H+ N+L++ Y + RI +A ++F+ + KD+ SW
Sbjct: 239 KNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWN 298
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN---------------- 250
+IA ++ +A F+ ++H G P+ S+ C+
Sbjct: 299 VVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILR 358
Query: 251 -----------------FARI--------LFNEIDSPDLASWNALIAGVASHSNANEAMS 285
+AR F+ + + D+ SWNA++ A + ++
Sbjct: 359 HSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLN 418
Query: 286 LFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF--DSNVP-VCNAILT 342
L + + + D +T+ SLL CI + + +VH Y +K G D P + NA+L
Sbjct: 419 LLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLD 478
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQ---HNQAEELFR------------ 387
YAKC + A +F L + VS+NS+++ + H+ A+ LF
Sbjct: 479 AYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSL 538
Query: 388 ----------------LFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTG 431
+F + A ++P+ +T +++ CA++ASL +V Q H YI + G
Sbjct: 539 MVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGG 598
Query: 432 LAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFT 491
L D+ + L+D+Y KCGSL A +F D+V +++++ GYA G G EAL +++
Sbjct: 599 LG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYS 657
Query: 492 RMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARA 551
M + P+ V + +LTAC H GL+++GL +Y + +G+ PT E +C VDL+AR
Sbjct: 658 HMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARG 717
Query: 552 GCVHEAEDFINQMACDADIVVWKSLL 577
G + +A F+ QM + + +W +LL
Sbjct: 718 GRLDDAYSFVTQMPVEPNANIWGTLL 743
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 164/635 (25%), Positives = 273/635 (42%), Gaps = 111/635 (17%)
Query: 38 YAGLISACSSLRSLQLGRKVHD------HILLSKCQPDVVLQNHILNMYGKCGSLEDARM 91
+ ++ AC+S+ L GR +H HI S+ + +LNMY KC ++D +
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSE------VSKSVLNMYAKCRRMDDCQK 77
Query: 92 GFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQM-LQSGVMPGQFTFGSIIKACSGLG 150
F +M + V W ++ G S + + ++ + M P TF ++ C LG
Sbjct: 78 MFRQMDSLDPVVWNIVLTGLSVSCGR-ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLG 136
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRIL-DARNVFSGIARKDVTSWGSMI 209
G+ +H+++IK+ + NAL++MY KF I DA F GIA KDV SW ++I
Sbjct: 137 DSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAII 196
Query: 210 AAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF------------------ 251
A FS+ +A F ML +PN +V C++
Sbjct: 197 AGFSENNMMADAFRSFCLMLKEPT-EPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQ 255
Query: 252 --------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMS 285
A LF + S DL SWN +IAG AS+ +A
Sbjct: 256 RSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQ 315
Query: 286 LFSEMRDR-ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGF-DSNVPVCNAILTM 343
LF + + ++ PD +T+ S+L C L G ++HSYI++ + + V NA+++
Sbjct: 316 LFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISF 375
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
YA+ A F L D +SWN+I+ A + + L +L I D +T
Sbjct: 376 YARFGDTSAAYWAF-SLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVT 434
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAFD---VFVMNGLMDIYIKCGSLGSARK--- 457
++ C + + V ++H Y K GL D + N L+D Y KCG++ A K
Sbjct: 435 ILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFL 494
Query: 458 -----------------------------LFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
LF M D+ +WS ++ YA+ C +EA+
Sbjct: 495 GLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIG 554
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR-----IMENEYGIIPTREHCSC 543
+F +++ G+ PN VT++ +L C+ + LHL R I+ G I +
Sbjct: 555 VFREIQARGMRPNTVTIMNLLPVCAQLA----SLHLVRQCHGYIIRGGLGDIRLK---GT 607
Query: 544 VVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
++D+ A+ G + A + Q D+V++ +++A
Sbjct: 608 LLDVYAKCGSLKHAYS-VFQSDARRDLVMFTAMVA 641
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/504 (23%), Positives = 219/504 (43%), Gaps = 59/504 (11%)
Query: 128 LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRI 187
L SG F ++KAC+ + + GR LH V K H + +++ MY K R+
Sbjct: 13 LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRM 72
Query: 188 LDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSA 247
D + +F + D W ++ S + E + F M +P+ F V
Sbjct: 73 DDCQKMFRQMDSLDPVVWNIVLTGLS-VSCGRETMRFFKAMHFADEPKPSSVTFAIVLPL 131
Query: 248 C-----------------------------------SNFARIL------FNEIDSPDLAS 266
C + F I F+ I D+ S
Sbjct: 132 CVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVS 191
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIG---RLTLYQGMQVHS 323
WNA+IAG + ++ +A F M P+ T+ ++L C + G Q+HS
Sbjct: 192 WNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHS 251
Query: 324 YIIKMGF-DSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
Y+++ + ++V VCN++++ Y + + A +F +G + D VSWN +IA + +
Sbjct: 252 YVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMG-SKDLVSWNVVIAGYASNCEW 310
Query: 383 EELFRLFSRML-ASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITK-TGLAFDVFVMN 440
+ F+LF ++ + PD +T ++ CA++ L ++H YI + + L D V N
Sbjct: 311 FKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGN 370
Query: 441 GLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSP 500
L+ Y + G +A F+ M D++SW++++ +A + L L + + ++
Sbjct: 371 ALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITL 430
Query: 501 NLVTLVGVLTACSHV---GLVEEGLHLYRIMENEYGIIPTREHC---SCVVDLLARAGCV 554
+ VT++ +L C +V G V+E +H Y + + G++ E + ++D A+ G V
Sbjct: 431 DSVTILSLLKFCINVQGIGKVKE-VHGYSV---KAGLLHDEEEPKLGNALLDAYAKCGNV 486
Query: 555 HEAEDFINQMACDADIVVWKSLLA 578
A ++ +V + SLL+
Sbjct: 487 EYAHKIFLGLSERRTLVSYNSLLS 510
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 162/354 (45%), Gaps = 33/354 (9%)
Query: 70 VVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQ 129
+V N +L+ Y GS +DA+M F +M ++ +W+ M+ +++ N+AI ++ ++
Sbjct: 502 LVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQA 561
Query: 130 SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILD 189
G+ P T +++ C+ L S+ L RQ H ++I+ G + + L+ +Y K +
Sbjct: 562 RGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGD-IRLKGTLLDVYAKCGSLKH 620
Query: 190 ARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS 249
A +VF AR+D+ + +M+A ++ G EAL ++ M +P+ ++ +AC
Sbjct: 621 AYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESN-IKPDHVFITTMLTACC 679
Query: 250 NFARI-----LFNEIDS-----PDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
+ I +++ I + P + + + +A ++A S ++M + P+
Sbjct: 680 HAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQM---PVEPNA 736
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAIL--TMYA-----KCSVLCN 352
+LL AC + G V +++++ D N +L MYA + +
Sbjct: 737 NIWGTLLRACTTYNRMDLGHSVANHLLQAESDDT---GNHVLISNMYAADAKWEGVMELR 793
Query: 353 ALLVFKELGKNADSVSW-------NSIIAACLQHNQAEELFRLFSRMLASQIKP 399
L+ KE+ K A SW N ++ H + + +F L + + +P
Sbjct: 794 NLMKKKEMKKPA-GCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKEP 846
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 7/184 (3%)
Query: 33 IRPSTYA--GLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP+T L+ C+ L SL L R+ H +I+ D+ L+ +L++Y KCGSL+ A
Sbjct: 564 MRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAY 622
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F +R++V +TAM+AG + + + +A+ +Y M +S + P +++ AC G
Sbjct: 623 SVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAG 682
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIA--MYTKFDRILDARNVFSGIA-RKDVTSWGS 207
+ G Q++ I++ HG + A + + R+ DA + + + + WG+
Sbjct: 683 LIQDGLQIY-DSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGT 741
Query: 208 MIAA 211
++ A
Sbjct: 742 LLRA 745
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 261 bits (667), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 165/570 (28%), Positives = 285/570 (50%), Gaps = 50/570 (8%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T+ L+ AC+SL+ L G +H +L++ D + + ++N+Y K G L AR F++M
Sbjct: 48 TFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEM 107
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
+R+VV WTAMI S+ +A L +M G+ PG T +++ SG+ + +
Sbjct: 108 RERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVT---LLEMLSGVLEITQLQ 164
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
LH + + N+++ +Y K D + DA+++F + ++D+ SW +MI+ ++ +G
Sbjct: 165 CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVG 224
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-----ARIL---------------- 255
E L M G +P++ FG+ S R+L
Sbjct: 225 NMSEILKLLYRMRGDG-LRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLK 283
Query: 256 -------------------FNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM--RDRE 294
I + D+ W +I+G+ A +A+ +FSEM +
Sbjct: 284 TALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSD 343
Query: 295 LLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNAL 354
L + + CA +G L G VH Y+++ G+ + P N+++TMYAKC L +L
Sbjct: 344 LSSEAIASVVASCAQLGSFDL--GASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSL 401
Query: 355 LVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKP-DHITFNDVMGACAK 413
++F+ + + D VSWN+II+ Q+ + LF M ++ D T ++ AC+
Sbjct: 402 VIFERMNER-DLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSS 460
Query: 414 MASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSL 473
+L + +HC + ++ + V L+D+Y KCG L +A++ F+ + DVVSW L
Sbjct: 461 AGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGIL 520
Query: 474 ILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYG 533
I GY G GD AL++++ G+ PN V + VL++CSH G+V++GL ++ M ++G
Sbjct: 521 IAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFG 580
Query: 534 IIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
+ P EH +CVVDLL RA + +A F +
Sbjct: 581 VEPNHEHLACVVDLLCRAKRIEDAFKFYKE 610
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 197/423 (46%), Gaps = 46/423 (10%)
Query: 31 IRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
I+ P T ++S + LQ +HD ++ D+ + N +LN+Y KC + DA+
Sbjct: 143 IKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAK 199
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
FD+M QR++VSW MI+G + ++ +KL +M G+ P Q TFG+ + +
Sbjct: 200 DLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMC 259
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ +GR LH ++K+ + + ALI MY K + + V I KDV W MI+
Sbjct: 260 DLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMIS 319
Query: 211 AFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFAR----------------- 253
+LG +AL F+EML G+ +E I SV ++C+
Sbjct: 320 GLMRLGRAEKALIVFSEMLQSGSDLSSEAI-ASVVASCAQLGSFDLGASVHGYVLRHGYT 378
Query: 254 -----------------------ILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEM 290
++F ++ DL SWNA+I+G A + + +A+ LF EM
Sbjct: 379 LDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEM 438
Query: 291 RDRELLP-DGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSV 349
+ + + D TV SLL AC L G +H +I+ V A++ MY+KC
Sbjct: 439 KFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGY 498
Query: 350 LCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMG 409
L A F + D VSW +IA H + + ++S L S ++P+H+ F V+
Sbjct: 499 LEAAQRCFDSISWK-DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLS 557
Query: 410 ACA 412
+C+
Sbjct: 558 SCS 560
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 208/469 (44%), Gaps = 72/469 (15%)
Query: 112 SQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHL 171
S + + + ML + ++P FTF S++KAC+ L + G +H
Sbjct: 22 SSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIH------------ 69
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHH 231
Q L+ N FS D S++ ++K G +L H
Sbjct: 70 --QQVLV-------------NGFS----SDFYISSSLVNLYAKFG-----------LLAH 99
Query: 232 GAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMR 291
AR +F E+ D+ W A+I + EA SL +EMR
Sbjct: 100 --------------------ARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMR 139
Query: 292 DRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLC 351
+ + P +T+ +L G L + Q +H + + GFD ++ V N++L +Y KC +
Sbjct: 140 FQGIKPGPVTLLEMLS---GVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVG 196
Query: 352 NALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGAC 411
+A +F ++ + D VSWN++I+ E+ +L RM ++PD TF +
Sbjct: 197 DAKDLFDQM-EQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVS 255
Query: 412 AKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWS 471
M LEM LHC I KTG D+ + L+ +Y+KCG ++ ++ + N DVV W+
Sbjct: 256 GTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWT 315
Query: 472 SLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEG--LHLYRIME 529
+I G + G ++AL +F+ M G + + V+ +C+ +G + G +H Y +
Sbjct: 316 VMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVL-- 373
Query: 530 NEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+G + ++ + A+ G + ++ +M + D+V W ++++
Sbjct: 374 -RHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIIS 420
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 137/259 (52%), Gaps = 4/259 (1%)
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
+N+ I ++SH + + +S FS M +LLPD T SLL AC L G+ +H ++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
GF S+ + ++++ +YAK +L +A VF+E+ + D V W ++I + E
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEM-RERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
L + M IKP +T +++ ++ L+ LH + G D+ VMN ++++Y
Sbjct: 133 SLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLY 189
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
KC +G A+ LF+ ME D+VSW+++I GYA G E LKL RMR G+ P+ T
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249
Query: 507 GVLTACSHVGLVEEGLHLY 525
L+ + +E G L+
Sbjct: 250 ASLSVSGTMCDLEMGRMLH 268
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 175/401 (43%), Gaps = 41/401 (10%)
Query: 24 FSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKC 83
+ +R T+ +S ++ L++GR +H I+ + D+ L+ ++ MY KC
Sbjct: 234 YRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKC 293
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSII 143
G E + + +P ++VV WT MI+G + + A+ ++ +MLQSG S++
Sbjct: 294 GKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVV 353
Query: 144 KACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVT 203
+C+ LGS LG +H +V++ + A N+LI MY K + + +F + +D+
Sbjct: 354 ASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLV 413
Query: 204 SWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSN------------- 250
SW ++I+ +++ +AL F EM Q + F S+ ACS+
Sbjct: 414 SWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCI 473
Query: 251 ---------------------------FARILFNEIDSPDLASWNALIAGVASHSNANEA 283
A+ F+ I D+ SW LIAG H + A
Sbjct: 474 VIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIA 533
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIK-MGFDSNVPVCNAILT 342
+ ++SE + P+ + ++L +C + QG+++ S +++ G + N ++
Sbjct: 534 LEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVD 593
Query: 343 MYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAE 383
+ + + +A +KE I+ AC + + E
Sbjct: 594 LLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTE 634
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 137/247 (55%), Gaps = 5/247 (2%)
Query: 6 VSSLCKQNLYNEALVAY-DFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLS 64
+S L + +AL+ + + Q+ +++ A ++++C+ L S LG VH ++L
Sbjct: 318 ISGLMRLGRAEKALIVFSEMLQSGSDLS--SEAIASVVASCAQLGSFDLGASVHGYVLRH 375
Query: 65 KCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLY 124
D N ++ MY KCG L+ + + F++M +R++VSW A+I+G +QN A+ L+
Sbjct: 376 GYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLF 435
Query: 125 IQM-LQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+M ++ FT S+++ACS G++ +G+ +H VI+S + AL+ MY+K
Sbjct: 436 EEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSK 495
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
+ A+ F I+ KDV SWG +IA + G AL ++E LH G +PN IF +
Sbjct: 496 CGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGM-EPNHVIFLA 554
Query: 244 VFSACSN 250
V S+CS+
Sbjct: 555 VLSSCSH 561
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 109/210 (51%), Gaps = 5/210 (2%)
Query: 369 WNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYIT 428
+NS I H +++ FS MLA+++ PD TF ++ ACA + L +H +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 429 KTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALK 488
G + D ++ + L+++Y K G L ARK+F M DVV W+++I Y++ G EA
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 489 LFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLL 548
L MR G+ P VTL+ +L+ + + + LH + ++ YG + +++L
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQL-QCLHDFAVI---YGFDCDIAVMNSMLNLY 189
Query: 549 ARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ V +A+D +QM D+V W ++++
Sbjct: 190 CKCDHVGDAKDLFDQME-QRDMVSWNTMIS 218
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 86/148 (58%)
Query: 17 EALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHI 76
+AL+ ++ + T ++ T L+ ACSS +L +G+ +H ++ S +P ++ +
Sbjct: 430 KALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTAL 489
Query: 77 LNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQ 136
++MY KCG LE A+ FD + ++VVSW +IAG + + + A+++Y + L SG+ P
Sbjct: 490 VDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNH 549
Query: 137 FTFGSIIKACSGLGSVCLGRQLHAHVIK 164
F +++ +CS G V G ++ + +++
Sbjct: 550 VIFLAVLSSCSHNGMVQQGLKIFSSMVR 577
>sp|Q9SUF9|PP305_ARATH Pentatricopeptide repeat-containing protein At4g08210
OS=Arabidopsis thaliana GN=PCMP-E100 PE=3 SV=1
Length = 686
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/608 (26%), Positives = 293/608 (48%), Gaps = 74/608 (12%)
Query: 45 CSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSW 104
C +++ + G + H++ +V + N++++MY L DA FD+M +RN+V+W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 105 TAMIAGCSQNYQENDAIKLYIQMLQSGV-MPGQFTFGSIIKACSGLGSVCLGRQLHAHVI 163
T M++G + + + N AI+LY +ML S +F + +++KAC +G + LG ++ +
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 164 KSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK----------------------- 200
K ++ N+++ MY K R+++A + F I R
Sbjct: 135 KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVT 194
Query: 201 --------DVTSWGSMIAAFSKLG----------YELEAL-------------CHFNEML 229
+V SW +I+ F G + E L C F +L
Sbjct: 195 LFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLL 254
Query: 230 HHG----------AYQPNEFIFGSVFSACSN-----FARILFNEID---SPDLASWNALI 271
G + + F ++ SN +A +F++ + +A WN+++
Sbjct: 255 TMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
Query: 272 AGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFD 331
+G + A+ L ++ +L D T+ L CI + L G+QVHS ++ G++
Sbjct: 315 SGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYE 374
Query: 332 SNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSR 391
+ V + ++ ++A + +A +F L N D ++++ +I C++ F LF
Sbjct: 375 LDYIVGSILVDLHANVGNIQDAHKLFHRL-PNKDIIAFSGLIRGCVKSGFNSLAFYLFRE 433
Query: 392 MLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGS 451
++ + D ++++ C+ +ASL Q+H K G + L+D+Y+KCG
Sbjct: 434 LIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGE 493
Query: 452 LGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTA 511
+ + LF+ M DVVSW+ +I+G+ Q G +EA + F +M ++G+ PN VT +G+L+A
Sbjct: 494 IDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSA 553
Query: 512 CSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIV 571
C H GL+EE M++EYG+ P EH CVVDLL +AG EA + IN+M + D
Sbjct: 554 CRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKT 613
Query: 572 VWKSLLAS 579
+W SLL +
Sbjct: 614 IWTSLLTA 621
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 139/514 (27%), Positives = 223/514 (43%), Gaps = 81/514 (15%)
Query: 38 YAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFD--- 94
Y+ ++ AC + +QLG V++ I + DVVL N +++MY K G L +A F
Sbjct: 110 YSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEIL 169
Query: 95 ----------------------------KMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQ 126
+MPQ NVVSW +I+G A++ ++
Sbjct: 170 RPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVR 228
Query: 127 MLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDR 186
M + G++ F +KACS G + +G+QLH V+KS S A +ALI MY+
Sbjct: 229 MQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGS 288
Query: 187 ILDARNVFSG---IARKDVTSWGSMIAAFSKLGYELEA------------LCHFNEMLHH 231
++ A +VF V W SM++ F + E EA LC F+
Sbjct: 289 LIYAADVFHQEKLAVNSSVAVWNSMLSGF-LINEENEAALWLLLQIYQSDLC-FDSYTLS 346
Query: 232 GAYQ-----------------------PNEFIFGSVFSAC-SNFARI-----LFNEIDSP 262
GA + ++I GS+ +N I LF+ + +
Sbjct: 347 GALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNK 406
Query: 263 DLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVH 322
D+ +++ LI G + A LF E+ L D V ++L C +L G Q+H
Sbjct: 407 DIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIH 466
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
IK G++S A++ MY KC + N +++F + + D VSW II Q+ +
Sbjct: 467 GLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLER-DVVSWTGIIVGFGQNGRV 525
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMV-TQLHCYITKTGLAFDVFVMNG 441
EE FR F +M+ I+P+ +TF ++ AC LE + L ++ GL +
Sbjct: 526 EEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYC 585
Query: 442 LMDIYIKCGSLGSARKLFNFME-NPDVVSWSSLI 474
++D+ + G A +L N M PD W+SL+
Sbjct: 586 VVDLLGQAGLFQEANELINKMPLEPDKTIWTSLL 619
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/508 (23%), Positives = 212/508 (41%), Gaps = 76/508 (14%)
Query: 143 IKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
++ C + + G + AHVIK ++ N +I+MY F + DA VF ++ +++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 203 TSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARIL------- 255
+W +M++ ++ G +A+ + ML NEF++ +V AC I
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 256 ---------------------------------FNEIDSPDLASWNALIAGVASHSNANE 282
F EI P SWN LI+G +E
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 283 AMSLFSEMR-----------------------------DRE-LLPDGLTVHSLLCACIGR 312
A++LF M RE L+ DG + L AC
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFG 251
Query: 313 LTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVF--KELGKNADSVSWN 370
L G Q+H ++K G +S+ +A++ MY+ C L A VF ++L N+ WN
Sbjct: 252 GLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWN 311
Query: 371 SIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
S+++ L + + E L ++ S + D T + + C +L + Q+H + +
Sbjct: 312 SMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVS 371
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
G D V + L+D++ G++ A KLF+ + N D++++S LI G + G A LF
Sbjct: 372 GYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLF 431
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRI-MENEYGIIPTREHCSCVVDLLA 549
+ LG+ + + +L CS + + G ++ + ++ Y P + +VD+
Sbjct: 432 RELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVT--ATALVDMYV 489
Query: 550 RAGCVHEAEDFINQMACDADIVVWKSLL 577
+ G + + M + D+V W ++
Sbjct: 490 KCGEIDNGVVLFDGM-LERDVVSWTGII 516
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 169/346 (48%), Gaps = 18/346 (5%)
Query: 37 TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKM 96
T +G + C + +L+LG +VH +++S + D ++ + +++++ G+++DA F ++
Sbjct: 344 TLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRL 403
Query: 97 PQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGR 156
P +++++++ +I GC ++ + A L+ ++++ G+ QF +I+K CS L S+ G+
Sbjct: 404 PNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGK 463
Query: 157 QLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLG 216
Q+H IK + S + AL+ MY K I + +F G+ +DV SW +I F + G
Sbjct: 464 QIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNG 523
Query: 217 YELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF-----ARILFNEIDS-----PDLAS 266
EA +F++M++ G +PN+ F + SAC + AR + S P L
Sbjct: 524 RVEEAFRYFHKMINIGI-EPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEH 582
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
+ ++ + EA L ++M L PD SLL AC + ++
Sbjct: 583 YYCVVDLLGQAGLFQEANELINKM---PLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLL 639
Query: 327 KMGFDSNVPVCNAILTMYAKCSV---LCNALLVFKELGKNADSVSW 369
K GF + V ++ YA + L K+LG +SW
Sbjct: 640 K-GFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAKESGMSW 684
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 64/135 (47%), Gaps = 7/135 (5%)
Query: 21 AYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNH--I 76
A+ + NI I P+ T+ GL+SAC L+ R + + S+ + L+++ +
Sbjct: 528 AFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLE-TMKSEYGLEPYLEHYYCV 586
Query: 77 LNMYGKCGSLEDARMGFDKMP-QRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG 135
+++ G+ G ++A +KMP + + WT+++ C ++ + + + L G
Sbjct: 587 VDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACG-THKNAGLVTVIAEKLLKGFPDD 645
Query: 136 QFTFGSIIKACSGLG 150
+ S+ A + LG
Sbjct: 646 PSVYTSLSNAYATLG 660
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 259 bits (663), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 170/569 (29%), Positives = 289/569 (50%), Gaps = 44/569 (7%)
Query: 50 SLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIA 109
+LQ + +H +++SK +V + ++N+Y G++ AR FD + R+V +W MI+
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 110 GCSQNYQENDAIKLY-IQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHG 168
G + ++ I+ + + ML SG+ P TF S++KAC +V G ++H +K
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFM 182
Query: 169 SHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEM 228
+ +LI +Y+++ + +AR +F + +D+ SW +MI+ + + G EAL N +
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 229 -------------------------------LHHGAYQPNEFIFGSVFSACSNFARI--- 254
+ HG + F+ + + F R+
Sbjct: 243 RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG-LESELFVSNKLIDLYAEFGRLRDC 301
Query: 255 --LFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGR 312
+F+ + DL SWN++I + A+SLF EMR + PD LT+ SL
Sbjct: 302 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 313 LTLYQGMQVHSYIIKMG-FDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNS 371
+ V + ++ G F ++ + NA++ MYAK ++ +A VF L N D +SWN+
Sbjct: 362 GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL-PNTDVISWNT 420
Query: 372 IIAACLQHNQAEELFRLFSRMLAS-QIKPDHITFNDVMGACAKMASLEMVTQLHCYITKT 430
II+ Q+ A E +++ M +I + T+ V+ AC++ +L +LH + K
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 480
Query: 431 GLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLF 490
GL DVFV+ L D+Y KCG L A LF + + V W++LI + G G++A+ LF
Sbjct: 481 GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLF 540
Query: 491 TRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLAR 550
M GV P+ +T V +L+ACSH GLV+EG + +M+ +YGI P+ +H C+VD+ R
Sbjct: 541 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGR 600
Query: 551 AGCVHEAEDFINQMACDADIVVWKSLLAS 579
AG + A FI M+ D +W +LL++
Sbjct: 601 AGQLETALKFIKSMSLQPDASIWGALLSA 629
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/478 (28%), Positives = 228/478 (47%), Gaps = 51/478 (10%)
Query: 141 SIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARK 200
++ + C+ L S + LHA ++ S+ ++ L+ +Y + AR+ F I +
Sbjct: 59 TLFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNF--------- 251
DV +W MI+ + + G E + F+ + P+ F SV AC
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCL 175
Query: 252 ----------------------------ARILFNEIDSPDLASWNALIAGVASHSNANEA 283
ARILF+E+ D+ SWNA+I+G NA EA
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 284 MSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTM 343
++L + +R D +TV SLL AC +G+ +HSY IK G +S + V N ++ +
Sbjct: 236 LTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291
Query: 344 YAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHIT 403
YA+ L + VF + D +SWNSII A + Q LF M S+I+PD +T
Sbjct: 292 YAEFGRLRDCQKVFDRMYVR-DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLT 350
Query: 404 FNDVMGACAKMASLEMVTQLHCYITKTGLAF-DVFVMNGLMDIYIKCGSLGSARKLFNFM 462
+ +++ + + + + G D+ + N ++ +Y K G + SAR +FN++
Sbjct: 351 LISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 410
Query: 463 ENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNLVTLVGVLTACSHVGLVEEG 521
N DV+SW+++I GYAQ G EA++++ M G ++ N T V VL ACS G + +G
Sbjct: 411 PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 470
Query: 522 LHLY-RIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ L+ R+++N G+ + + D+ + G + +A Q+ + V W +L+A
Sbjct: 471 MKLHGRLLKN--GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIA 525
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 190/446 (42%), Gaps = 51/446 (11%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS-TYAGLISACSSLRSLQLGRKVHDHI 61
N +S C+ EAL + +R S T L+SAC+ G +H +
Sbjct: 220 NAMISGYCQSGNAKEALTL------SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYS 273
Query: 62 LLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAI 121
+ + ++ + N ++++Y + G L D + FD+M R+++SW ++I N Q AI
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 122 KLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVI-KSEHGSHLIAQNALIAM 180
L+ +M S + P T S+ S LG + R + + K + NA++ M
Sbjct: 334 SLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 181 YTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFI 240
Y K + AR VF+ + DV SW ++I+ +++ G+ EA+ +N M G N+
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 453
Query: 241 FGSVFSACSNFARI----------------------------------------LFNEID 260
+ SV ACS + LF +I
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ 320
+ WN LIA H + +A+ LF EM D + PD +T +LL AC + +G
Sbjct: 514 RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573
Query: 321 VHSYI-IKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQH 379
+ G ++ ++ MY + L AL K + D+ W ++++AC H
Sbjct: 574 CFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVH 633
Query: 380 NQAEELFRLFSRMLASQIKPDHITFN 405
+L ++ S L +++P+H+ ++
Sbjct: 634 GNV-DLGKIASEHLF-EVEPEHVGYH 657
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 109/277 (39%), Gaps = 72/277 (25%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHIL 62
N +S + +EA+ Y+ + I T+ ++ ACS +L+ G K+H +L
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL 478
Query: 63 LSKCQPDVVLQNHILNMYGKCGSLED-------------------------------ARM 91
+ DV + + +MYGKCG LED A M
Sbjct: 479 KNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVM 538
Query: 92 GFDKMPQRNV----VSWTAMIAGCSQ----------------NYQENDAIKLY------- 124
F +M V +++ +++ CS +Y ++K Y
Sbjct: 539 LFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMY 598
Query: 125 ---------IQMLQS-GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHV--IKSEH-GSHL 171
++ ++S + P +G+++ AC G+V LG+ H+ ++ EH G H+
Sbjct: 599 GRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHV 658
Query: 172 IAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSM 208
+ N + A K++ + + R++ G + W SM
Sbjct: 659 LLSN-MYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 694
>sp|Q3E9N1|PP359_ARATH Pentatricopeptide repeat-containing protein At4g39952,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2
SV=2
Length = 775
Score = 259 bits (662), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 187/626 (29%), Positives = 302/626 (48%), Gaps = 63/626 (10%)
Query: 1 FSN-DYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHD 59
FSN DY SLC + FS + T ++SAC+ L +G VH
Sbjct: 101 FSNGDYARSLC-----------FFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHG 149
Query: 60 HILL-SKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQEN 118
+L + + + Y KCG L+DA + FD+MP R+VV+WTA+I+G QN +
Sbjct: 150 LVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESE 209
Query: 119 DAIKLYIQMLQSGV---MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQN 175
+ +M +G P T +ACS LG++ GR LH +K+ S Q+
Sbjct: 210 GGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQS 269
Query: 176 ALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQ 235
++ + Y+K +A F + +D+ SW S+IA+ ++ G E+ F EM + G +
Sbjct: 270 SMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHP 329
Query: 236 P--------NE---------------FIFGSVFSACS----------------NFARILF 256
NE F+ FS S + A LF
Sbjct: 330 DGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLF 389
Query: 257 NEI-DSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCAC--IGRL 313
I + + +WN ++ G + + LF ++++ + D + S++ +C IG +
Sbjct: 390 CRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAV 449
Query: 314 TLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSII 373
L G +H Y++K D + V N+++ +Y K L A +F E N ++WN++I
Sbjct: 450 LL--GKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNV--ITWNAMI 505
Query: 374 AACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLA 433
A+ + Q+E+ LF RM++ KP IT ++ AC SLE +H YIT+T
Sbjct: 506 ASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHE 565
Query: 434 FDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRM 493
++ + L+D+Y KCG L +R+LF+ D V W+ +I GY G + A+ LF +M
Sbjct: 566 MNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQM 625
Query: 494 RSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGC 553
V P T + +L+AC+H GLVE+G L+ M ++Y + P +H SC+VDLL+R+G
Sbjct: 626 EESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGN 684
Query: 554 VHEAEDFINQMACDADIVVWKSLLAS 579
+ EAE + M D V+W +LL+S
Sbjct: 685 LEEAESTVMSMPFSPDGVIWGTLLSS 710
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/580 (23%), Positives = 265/580 (45%), Gaps = 52/580 (8%)
Query: 45 CSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSW 104
C SL+ RK + I+ ++ + + +++ Y G + F + +R++ W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 105 TAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK 164
++I N ++ + ML SG P FT ++ AC+ L +G +H V+K
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 165 SEHGS---HLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEA 221
HG + + + Y+K + DA VF + +DV +W ++I+ + G
Sbjct: 154 --HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGG 211
Query: 222 LCHFNEMLHHGA--YQPNEFIFGSVFSACSNF---------------------------- 251
L + +M G+ +PN F ACSN
Sbjct: 212 LGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSM 271
Query: 252 ------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
A + F E+ D+ SW ++IA +A + E+ +F EM+++ + PDG
Sbjct: 272 FSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDG 331
Query: 300 LTVHSLLCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKE 359
+ + L+ + + QG H ++I+ F + VCN++L+MY K +L A +F
Sbjct: 332 VVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCR 391
Query: 360 LGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEM 419
+ + + +WN+++ + + LF ++ I+ D + V+ +C+ + ++ +
Sbjct: 392 ISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLL 451
Query: 420 VTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQ 479
LHCY+ KT L + V+N L+D+Y K G L A ++F + +V++W+++I Y
Sbjct: 452 GKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVH 510
Query: 480 FGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYR-IMENEYGIIPTR 538
++A+ LF RM S P+ +TLV +L AC + G +E G ++R I E E+ +
Sbjct: 511 CEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEM--NL 568
Query: 539 EHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++D+ A+ G + ++ + + D V W +++
Sbjct: 569 SLSAALIDMYAKCGHLEKSRELFDA-GNQKDAVCWNVMIS 607
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 146/304 (48%), Gaps = 14/304 (4%)
Query: 27 NNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSL 86
N I I ++ +IS+CS + ++ LG+ +H +++ + + + N ++++YGK G L
Sbjct: 425 QNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDL 484
Query: 87 EDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKAC 146
A F + NV++W AMIA Q AI L+ +M+ P T +++ AC
Sbjct: 485 TVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMAC 543
Query: 147 SGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWG 206
GS+ G+ +H ++ ++EH +L ALI MY K + +R +F +KD W
Sbjct: 544 VNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWN 603
Query: 207 SMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARI-----LFNEID- 260
MI+ + G A+ F++M +P F ++ SAC++ + LF ++
Sbjct: 604 VMISGYGMHGDVESAIALFDQM-EESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ 662
Query: 261 ---SPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQ 317
P+L ++ L+ ++ N EA S M PDG+ +LL +C+
Sbjct: 663 YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSM---PFSPDGVIWGTLLSSCMTHGEFEM 719
Query: 318 GMQV 321
G+++
Sbjct: 720 GIRM 723
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 185/430 (43%), Gaps = 53/430 (12%)
Query: 41 LISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQR- 99
LI+ + + G+ H ++ D + N +L+MY K L A F ++ +
Sbjct: 337 LINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEG 396
Query: 100 NVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLH 159
N +W M+ G + I+L+ ++ G+ + S+I +CS +G+V LG+ LH
Sbjct: 397 NKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLH 456
Query: 160 AHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYEL 219
+V+K+ + N+LI +Y K + A +F A +V +W +MIA++
Sbjct: 457 CYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSE 515
Query: 220 EALCHFNEMLHHGAYQPNEFIFGSVFSACSNF---------------------------- 251
+A+ F+ M+ ++P+ ++ AC N
Sbjct: 516 KAIALFDRMVSEN-FKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAAL 574
Query: 252 ------------ARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDG 299
+R LF+ + D WN +I+G H + A++LF +M + ++ P G
Sbjct: 575 IDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTG 634
Query: 300 LTVHSLLCACIGRLTLYQG----MQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALL 355
T +LL AC + QG +++H Y +K N+ + ++ + ++ L A
Sbjct: 635 PTFLALLSACTHAGLVEQGKKLFLKMHQYDVK----PNLKHYSCLVDLLSRSGNLEEAES 690
Query: 356 VFKELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD--HITFNDVMGACAK 413
+ + D V W +++++C+ H + E R+ R +AS + D +I ++ A K
Sbjct: 691 TVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGK 750
Query: 414 MASLEMVTQL 423
E ++
Sbjct: 751 WEEAERAREM 760
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 259 bits (662), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 164/574 (28%), Positives = 277/574 (48%), Gaps = 57/574 (9%)
Query: 6 VSSLCKQNLYNEALVAYDFSQNNTNIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSK 65
+SS + NEAL + +++ +Y G+IS +L RK+ D +
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSV-----SYNGMISGYLRNGEFELARKLFDEM---- 121
Query: 66 CQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ D+V N ++ Y + +L AR F+ MP+R+V SW M++G +QN +DA ++
Sbjct: 122 PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFD 181
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + + + ++ S + C+ + KS L++ N L+ + K
Sbjct: 182 RMPEKNDVSWNALLSAYVQN-SKMEEACM-------LFKSRENWALVSWNCLLGGFVKKK 233
Query: 186 RILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVF 245
+I++AR F + +DV SW ++I +++ G EA F+E + + G +
Sbjct: 234 KIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQ 293
Query: 246 SACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSL 305
+ AR LF+++ + SWNA++AG A LF M R
Sbjct: 294 NRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR------------ 341
Query: 306 LCACIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNAD 365
NV N ++T YA+C + A +F ++ K D
Sbjct: 342 ---------------------------NVSTWNTMITGYAQCGKISEAKNLFDKMPKR-D 373
Query: 366 SVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHC 425
VSW ++IA Q + E RLF +M + + +F+ + CA + +LE+ QLH
Sbjct: 374 PVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG 433
Query: 426 YITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDE 485
+ K G FV N L+ +Y KCGS+ A LF M D+VSW+++I GY++ G G+
Sbjct: 434 RLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEV 493
Query: 486 ALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVV 545
AL+ F M+ G+ P+ T+V VL+ACSH GLV++G + M +YG++P +H +C+V
Sbjct: 494 ALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMV 553
Query: 546 DLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
DLL RAG + +A + + M + D +W +LL +
Sbjct: 554 DLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA 587
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 186/438 (42%), Gaps = 77/438 (17%)
Query: 201 DVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACSNFARILFNEID 260
D+ W I+++ + G EAL F M + N I G + + AR LF+E+
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 261 SPDLASWNALIAGVASHSNANEAMSLFSEMRDREL------------------------- 295
DL SWN +I G + N +A LF M +R++
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 296 LPD--GLTVHSLLCACIGRLTLYQ---------------------GMQVHSYII--KMGF 330
+P+ ++ ++LL A + + + G I+ + F
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFF 242
Query: 331 DS----NVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELF 386
DS +V N I+T YA+ + A +F E D +W ++++ +Q+ EE
Sbjct: 243 DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE-SPVQDVFTWTAMVSGYIQNRMVEEAR 301
Query: 387 RLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIY 446
LF +M + + +++N ++ + +EM +L + +V N ++ Y
Sbjct: 302 ELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVMP----CRNVSTWNTMITGY 353
Query: 447 IKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLV 506
+CG + A+ LF+ M D VSW+++I GY+Q G EAL+LF +M G N +
Sbjct: 354 AQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFS 413
Query: 507 GVLTACSHVGLVEEGLHLY-RIMENEYGIIPTREHCSCVVD-----LLARAGCVHEAEDF 560
L+ C+ V +E G L+ R+++ Y C V + + G + EA D
Sbjct: 414 SALSTCADVVALELGKQLHGRLVKGGY-------ETGCFVGNALLLMYCKCGSIEEANDL 466
Query: 561 INQMACDADIVVWKSLLA 578
+MA DIV W +++A
Sbjct: 467 FKEMA-GKDIVSWNTMIA 483
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 150/361 (41%), Gaps = 60/361 (16%)
Query: 69 DVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQML 128
DVV N I+ Y + G +++AR FD+ P ++V +WTAM++G QN +A +L+ +M
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP 308
Query: 129 QS-----GVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTK 183
+ M + G ++ L V R + N +I Y +
Sbjct: 309 ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS-------------TWNTMITGYAQ 355
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
+I +A+N+F + ++D SW +MIA +S+ G+ EAL F +M G + N F S
Sbjct: 356 CGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSFSS 414
Query: 244 VFSACSNF----------------------------------------ARILFNEIDSPD 263
S C++ A LF E+ D
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 474
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQ-VH 322
+ SWN +IAG + H A+ F M+ L PD T+ ++L AC + +G Q +
Sbjct: 475 IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFY 534
Query: 323 SYIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQA 382
+ G N ++ + + +L +A + K + D+ W +++ A H
Sbjct: 535 TMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNT 594
Query: 383 E 383
E
Sbjct: 595 E 595
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 20/182 (10%)
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAF-----DVFVMNGLMDIYIKCGSLGSARKLF 459
N+ GA A SL+ TQ ++T D+ N + Y++ G A ++F
Sbjct: 29 NNAHGA-ANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVF 87
Query: 460 NFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVE 519
M VS++ +I GY + G + A KLF M + V + G + ++G
Sbjct: 88 KRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRN-RNLGKAR 146
Query: 520 EGLHLYRIMENEYGIIPTREHCS--CVVDLLARAGCVHEAEDFINQMACDADIVVWKSLL 577
E L+ IM P R+ CS ++ A+ GCV +A ++M D V W +LL
Sbjct: 147 E---LFEIM-------PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKND-VSWNALL 195
Query: 578 AS 579
++
Sbjct: 196 SA 197
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 255 bits (651), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 165/618 (26%), Positives = 302/618 (48%), Gaps = 52/618 (8%)
Query: 13 NLYNEALVAYDFSQNNTNI-RIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVV 71
NL +EAL+ Y + TY+ + AC+ ++L+ G+ VH H++ V
Sbjct: 84 NLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRV 143
Query: 72 LQNHILNMYGKCGSLED------ARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYI 125
+ N ++NMY C + D R FD M ++NVV+W +I+ + + +A + +
Sbjct: 144 VHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFG 203
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIK--SEHGSHLIAQNALIAMYTK 183
M++ V P +F ++ A S S+ + ++K E+ L ++ I+MY +
Sbjct: 204 IMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAE 263
Query: 184 FDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
I +R VF +++ W +MI + + +E++ F E + +E +
Sbjct: 264 LGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLL 323
Query: 244 VFSACS-----------------NFARI-----------------------LFNEIDSPD 263
SA S NF + +F + D
Sbjct: 324 AASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERD 383
Query: 264 LASWNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHS 323
+ SWN +I+ + +E + L EM+ + D +TV +LL A G Q H+
Sbjct: 384 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHA 443
Query: 324 YIIKMGFDSNVPVCNAILTMYAKCSVLCNALLVFKELG-KNADSVSWNSIIAACLQHNQA 382
++I+ G + + ++ MY+K ++ + +F+ G D +WNS+I+ Q+
Sbjct: 444 FLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHT 502
Query: 383 EELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGL 442
E+ F +F +ML I+P+ +T ++ AC+++ S+++ QLH + + L +VFV + L
Sbjct: 503 EKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASAL 562
Query: 443 MDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNL 502
+D+Y K G++ A +F+ + + V+++++ILGY Q G G+ A+ LF M+ G+ P+
Sbjct: 563 VDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDA 622
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFIN 562
+T V VL+ACS+ GL++EGL ++ M Y I P+ EH C+ D+L R G V+EA +F+
Sbjct: 623 ITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVK 682
Query: 563 QMACDADIV-VWKSLLAS 579
+ + +I +W SLL S
Sbjct: 683 GLGEEGNIAELWGSLLGS 700
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/539 (25%), Positives = 252/539 (46%), Gaps = 69/539 (12%)
Query: 84 GSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPG--QFTFGS 141
G+ + AR FD +P+ V W +I G N ++A+ Y +M ++ +T+ S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 142 IIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYT---------KFDRILDARN 192
+KAC+ ++ G+ +H H+I+ S + N+L+ MY ++D + R
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVV---RK 169
Query: 193 VFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGSVFSACS--- 249
VF + RK+V +W ++I+ + K G EA F M+ +P+ F +VF A S
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRM-EVKPSPVSFVNVFPAVSISR 228
Query: 250 ---------------------------------------NFARILFNEIDSPDLASWNAL 270
+R +F+ ++ WN +
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 271 IAGVASHSNANEAMSLFSE-MRDRELLPDGLTVHSLLCACIGRLTLYQ-GMQVHSYIIKM 328
I + E++ LF E + +E++ D +T + L + + L + G Q H ++ K
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVT-YLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 329 GFDSNVPVCNAILTMYAKCSVLCNALLVFKELGKNADSVSWNSIIAACLQHNQAEELFRL 388
+ + + N+++ MY++C + + VF + + D VSWN++I+A +Q+ +E L
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSM-RERDVVSWNTMISAFVQNGLDDEGLML 406
Query: 389 FSRMLASQIKPDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNG-LMDIYI 447
M K D+IT ++ A + + + E+ Q H ++ + G+ F+ MN L+D+Y
Sbjct: 407 VYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE--GMNSYLIDMYS 464
Query: 448 KCGSLGSARKLFN---FMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVT 504
K G + ++KLF + E D +W+S+I GY Q G ++ +F +M + PN VT
Sbjct: 465 KSGLIRISQKLFEGSGYAER-DQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVT 523
Query: 505 LVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQ 563
+ +L ACS +G V+ G L+ +Y + S +VD+ ++AG + AED +Q
Sbjct: 524 VASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFSQ 581
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 166/339 (48%), Gaps = 12/339 (3%)
Query: 251 FARILFNEIDSPDLASWNALIAGVASHSNANEAMSLFSEMRDRELLP--DGLTVHSLLCA 308
AR LF+ I P WN +I G ++ +EA+ +S M+ D T S L A
Sbjct: 57 LARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKA 116
Query: 309 CIGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYAKC--SVLCNALLVFKELGKN--- 363
C L G VH ++I+ +S+ V N+++ MY C + C V +++ N
Sbjct: 117 CAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRR 176
Query: 364 ADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITFNDVMGACAKMASLEMVTQL 423
+ V+WN++I+ ++ + E R F M+ ++KP ++F +V A + S++
Sbjct: 177 KNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVF 236
Query: 424 HCYITKTGLAF--DVFVMNGLMDIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFG 481
+ + K G + D+FV++ + +Y + G + S+R++F+ ++ W+++I Y Q
Sbjct: 237 YGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQND 296
Query: 482 CGDEALKLFTR-MRSLGVSPNLVTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREH 540
C E+++LF + S + + VT + +A S + VE G + + + +P
Sbjct: 297 CLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIV 356
Query: 541 CSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLAS 579
S +V + +R G VH++ M + D+V W +++++
Sbjct: 357 NSLMV-MYSRCGSVHKSFGVFLSMR-ERDVVSWNTMISA 393
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 30 NIRIRPSTYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDA 89
NIR T A ++ ACS + S+ LG+++H + +V + + +++MY K G+++ A
Sbjct: 516 NIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYA 575
Query: 90 RMGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGL 149
F + +RN V++T MI G Q+ AI L++ M +SG+ P TF +++ ACS
Sbjct: 576 EDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYS 635
Query: 150 GSVCLG-------RQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDV 202
G + G R+++ SEH + M + R+ +A G+ +
Sbjct: 636 GLIDEGLKIFEEMREVYNIQPSSEHYC------CITDMLGRVGRVNEAYEFVKGLGEEGN 689
Query: 203 TS--WGSMIAAFSKLGYELEALCHFNEML 229
+ WGS++ + KL ELE +E L
Sbjct: 690 IAELWGSLLGS-CKLHGELELAETVSERL 717
>sp|Q9M2Y4|PP276_ARATH Pentatricopeptide repeat-containing protein At3g49740
OS=Arabidopsis thaliana GN=PCMP-E84 PE=2 SV=1
Length = 737
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 173/559 (30%), Positives = 283/559 (50%), Gaps = 54/559 (9%)
Query: 67 QPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVS-WTAMIAGCSQNYQENDAIKLYI 125
+PDV +L+ K G +E A FDKMP+R+ V+ W AMI GC ++ +++L+
Sbjct: 120 EPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFR 179
Query: 126 QMLQSGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFD 185
+M + GV +F F +I+ C GS+ G+Q+H+ VIK+ NALI MY
Sbjct: 180 EMHKLGVRHDKFGFATILSMCD-YGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQ 238
Query: 186 RILDARNVF--SGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNEFIFGS 243
++DA VF + +A +D ++ +I + + E+L F +ML + +P + F S
Sbjct: 239 VVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRD-ESLLVFRKML-EASLRPTDLTFVS 296
Query: 244 VFSACS-------------------------------------NFARILFNEIDSPDLAS 266
V +CS A +F ++ DL +
Sbjct: 297 VMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVT 356
Query: 267 WNALIAGVASHSNANEAMSLFSEMRDRELLPDGLTVHSLLCACIGRLTLYQGMQVHSYII 326
WN +I+ AMS++ M + PD T SLL + L V + II
Sbjct: 357 WNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE---MVQACII 413
Query: 327 KMGFDSNVPVCNAILTMYAKCSVLCNALLVF-KELGKNADSVSWNSIIAACLQHNQAEEL 385
K G S + + NA+++ Y+K + A L+F + L KN +SWN+II+ + E
Sbjct: 414 KFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNL--ISWNAIISGFYHNGFPFEG 471
Query: 386 FRLFSRMLASQIK--PDHITFNDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLM 443
FS +L S+++ PD T + ++ C +SL + +Q H Y+ + G + + N L+
Sbjct: 472 LERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALI 531
Query: 444 DIYIKCGSLGSARKLFNFMENPDVVSWSSLILGYAQFGCGDEALKLFTRMRSLG-VSPNL 502
++Y +CG++ ++ ++FN M DVVSW+SLI Y++ G G+ A+ + M+ G V P+
Sbjct: 532 NMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDA 591
Query: 503 VTLVGVLTACSHVGLVEEGLHLYRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDF-- 560
T VL+ACSH GLVEEGL ++ M +G+I +H SC+VDLL RAG + EAE
Sbjct: 592 ATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVK 651
Query: 561 INQMACDADIVVWKSLLAS 579
I++ + + VW +L ++
Sbjct: 652 ISEKTIGSRVDVWWALFSA 670
Score = 165 bits (418), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 220/474 (46%), Gaps = 44/474 (9%)
Query: 108 IAGCSQNYQENDAIKLYIQMLQ-SGVMPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSE 166
+ G +++ + +A+KL+ + + + + P Q++ I L G Q+H + I+S
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 167 HGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFN 226
H N L+++Y + + + F I DV SW ++++A KLG A F+
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 227 EMLHHGAYQPNEFIFGSVFSACSNFARILFNEIDSPDLASWNALIAGVASHSNANEAMSL 286
+M P + D+A WNA+I G ++ L
Sbjct: 148 KM-------P-----------------------ERDDVAIWNAMITGCKESGYHETSVEL 177
Query: 287 FSEMRDRELLPDGLTVHSLLCAC-IGRLTLYQGMQVHSYIIKMGFDSNVPVCNAILTMYA 345
F EM + D ++L C G L G QVHS +IK GF V NA++TMY
Sbjct: 178 FREMHKLGVRHDKFGFATILSMCDYGSLDF--GKQVHSLVIKAGFFIASSVVNALITMYF 235
Query: 346 KCSVLCNALLVFKELGKNA-DSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPDHITF 404
C V+ +A LVF+E D V++N +I + E L +F +ML + ++P +TF
Sbjct: 236 NCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDESLL-VFRKMLEASLRPTDLTF 294
Query: 405 NDVMGACAKMASLEMVTQLHCYITKTGLAFDVFVMNGLMDIYIKCGSLGSARKLFNFMEN 464
VMG+C+ A M Q+H KTG V N M +Y G+A K+F +E
Sbjct: 295 VSVMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEE 351
Query: 465 PDVVSWSSLILGYAQFGCGDEALKLFTRMRSLGVSPNLVTLVGVLTACSHVGLVEEGLHL 524
D+V+W+++I Y Q G A+ ++ RM +GV P+ T G L A S L + L +
Sbjct: 352 KDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTF-GSLLATS---LDLDVLEM 407
Query: 525 YRIMENEYGIIPTREHCSCVVDLLARAGCVHEAEDFINQMACDADIVVWKSLLA 578
+ ++G+ E + ++ ++ G + +A D + + + +++ W ++++
Sbjct: 408 VQACIIKFGLSSKIEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAIIS 460
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 188/419 (44%), Gaps = 62/419 (14%)
Query: 33 IRPS--TYAGLISACSSLRSLQLGRKVHDHILLSKCQPDVVLQNHILNMYGKCGSLEDAR 90
+RP+ T+ ++ +CS +G +VH + + + ++ N + MY A
Sbjct: 287 LRPTDLTFVSVMGSCSCA---AMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAH 343
Query: 91 MGFDKMPQRNVVSWTAMIAGCSQNYQENDAIKLYIQMLQSGVMPGQFTFGSIIKACSGLG 150
F+ + ++++V+W MI+ +Q A+ +Y +M GV P +FTFGS++ L
Sbjct: 344 KVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLD 403
Query: 151 SVCLGRQLHAHVIKSEHGSHLIAQNALIAMYTKFDRILDARNVFSGIARKDVTSWGSMIA 210
+ + A +IK S + NALI+ Y+K +I A +F RK++ SW ++I+
Sbjct: 404 VL---EMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIIS 460
Query: 211 AFSKLGYELEALCHFN-------------------------------------EMLHHGA 233
F G+ E L F+ +L HG
Sbjct: 461 GFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQ 520
Query: 234 YQPNEFIFG----SVFSACSNFARIL--FNEIDSPDLASWNALIAGVASHSNANEAMSLF 287
++ E + G +++S C L FN++ D+ SWN+LI+ + H A++ +
Sbjct: 521 FK--ETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTY 578
Query: 288 SEMRDR-ELLPDGLTVHSLLCACIGRLTLYQGMQVHSYIIKM-GFDSNVPVCNAILTMYA 345
M+D +++PD T ++L AC + +G+++ + +++ G NV + ++ +
Sbjct: 579 KTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLG 638
Query: 346 KCSVLCNALLVF----KELGKNADSVSWNSIIAACLQHNQAEELFRLFSRMLASQIKPD 400
+ L A + K +G D W ++ +AC H +L ++ +++L + K D
Sbjct: 639 RAGHLDEAESLVKISEKTIGSRVD--VWWALFSACAAHGDL-KLGKMVAKLLMEKEKDD 694
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 129/252 (51%), Gaps = 10/252 (3%)
Query: 3 NDYVSSLCKQNLYNEALVAYDFSQNNTNIRIRPS--TYAGLISACSSLRSLQLGRKVHDH 60
N +SS + L A+ Y + I ++P T+ L++ L L++ V
Sbjct: 358 NTMISSYNQAKLGKSAMSVY---KRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQAC 411
Query: 61 ILLSKCQPDVVLQNHILNMYGKCGSLEDARMGFDKMPQRNVVSWTAMIAGCSQNYQENDA 120
I+ + + N +++ Y K G +E A + F++ ++N++SW A+I+G N +
Sbjct: 412 IIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEG 471
Query: 121 IKLYIQMLQSGV--MPGQFTFGSIIKACSGLGSVCLGRQLHAHVIKSEHGSHLIAQNALI 178
++ + +L+S V +P +T +++ C S+ LG Q HA+V++ + NALI
Sbjct: 472 LERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALI 531
Query: 179 AMYTKFDRILDARNVFSGIARKDVTSWGSMIAAFSKLGYELEALCHFNEMLHHGAYQPNE 238
MY++ I ++ VF+ ++ KDV SW S+I+A+S+ G A+ + M G P+
Sbjct: 532 NMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDA 591
Query: 239 FIFGSVFSACSN 250
F +V SACS+
Sbjct: 592 ATFSAVLSACSH 603
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.136 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 207,595,985
Number of Sequences: 539616
Number of extensions: 8391073
Number of successful extensions: 32733
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 22825
Number of HSP's gapped (non-prelim): 3027
length of query: 579
length of database: 191,569,459
effective HSP length: 123
effective length of query: 456
effective length of database: 125,196,691
effective search space: 57089691096
effective search space used: 57089691096
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)