Query 043610
Match_columns 430
No_of_seqs 158 out of 1751
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 11:06:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043610.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043610hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m5u_A Phosphoserine aminotran 100.0 6.9E-58 2.4E-62 453.9 40.1 354 68-430 3-361 (361)
2 3qm2_A Phosphoserine aminotran 100.0 6.3E-59 2.1E-63 465.3 28.3 356 69-430 26-386 (386)
3 3e77_A Phosphoserine aminotran 100.0 1.2E-57 4E-62 453.9 32.4 359 66-430 9-376 (377)
4 2c0r_A PSAT, phosphoserine ami 100.0 3.5E-46 1.2E-50 369.6 39.0 357 69-430 3-362 (362)
5 1w23_A Phosphoserine aminotran 100.0 1.4E-38 4.8E-43 314.1 38.7 352 69-428 2-359 (360)
6 3ffr_A Phosphoserine aminotran 100.0 5.6E-39 1.9E-43 316.4 33.6 342 69-426 3-361 (362)
7 3f0h_A Aminotransferase; RER07 100.0 4.9E-37 1.7E-41 304.8 33.4 342 67-429 16-374 (376)
8 2fyf_A PSAT, phosphoserine ami 100.0 1E-35 3.5E-40 298.6 40.7 342 68-428 38-397 (398)
9 3nnk_A Ureidoglycine-glyoxylat 100.0 2.1E-36 7.1E-41 303.6 32.9 344 65-428 8-389 (411)
10 1iug_A Putative aspartate amin 100.0 6E-36 2.1E-40 293.9 34.2 331 72-428 3-347 (352)
11 3zrp_A Serine-pyruvate aminotr 100.0 3.9E-36 1.3E-40 298.5 31.2 337 71-428 3-362 (384)
12 3isl_A Purine catabolism prote 100.0 6.2E-36 2.1E-40 300.7 32.2 342 68-429 9-390 (416)
13 2huf_A Alanine glyoxylate amin 100.0 1.9E-35 6.5E-40 295.1 33.2 344 65-428 14-382 (393)
14 2z9v_A Aspartate aminotransfer 100.0 1.8E-35 6.1E-40 295.2 32.9 344 65-428 4-370 (392)
15 3kgw_A Alanine-glyoxylate amin 100.0 5.2E-35 1.8E-39 291.2 32.5 342 68-428 21-387 (393)
16 2yrr_A Aminotransferase, class 100.0 6.3E-35 2.2E-39 286.2 29.9 333 71-427 1-351 (353)
17 2ch1_A 3-hydroxykynurenine tra 100.0 1.3E-34 4.3E-39 289.4 32.5 343 67-428 15-382 (396)
18 2dr1_A PH1308 protein, 386AA l 100.0 2.6E-34 9E-39 285.7 34.6 341 69-428 19-378 (386)
19 1m32_A 2-aminoethylphosphonate 100.0 2.3E-34 7.7E-39 283.6 29.3 339 70-428 4-364 (366)
20 4hvk_A Probable cysteine desul 100.0 9.1E-34 3.1E-38 280.7 31.8 337 71-428 2-372 (382)
21 2bkw_A Alanine-glyoxylate amin 100.0 7.7E-34 2.6E-38 282.2 27.6 337 69-428 4-383 (385)
22 4eb5_A Probable cysteine desul 100.0 2.8E-33 9.6E-38 277.9 30.5 337 71-428 2-372 (382)
23 1vjo_A Alanine--glyoxylate ami 100.0 3.7E-33 1.3E-37 278.7 31.2 338 69-426 33-392 (393)
24 3ke3_A Putative serine-pyruvat 100.0 7.6E-34 2.6E-38 283.5 25.5 313 106-428 26-375 (379)
25 1elu_A L-cysteine/L-cystine C- 100.0 7.2E-33 2.5E-37 275.7 31.3 347 68-425 15-388 (390)
26 3cai_A Possible aminotransfera 100.0 1E-32 3.5E-37 276.7 31.7 342 69-425 26-405 (406)
27 1kmj_A Selenocysteine lyase; p 100.0 2.8E-32 9.7E-37 272.6 32.9 346 69-428 23-404 (406)
28 1eg5_A Aminotransferase; PLP-d 100.0 3.3E-32 1.1E-36 270.1 31.6 337 71-428 3-375 (384)
29 1t3i_A Probable cysteine desul 100.0 1.6E-31 5.5E-36 268.6 33.4 347 70-428 29-412 (420)
30 3vax_A Putative uncharacterize 100.0 1.5E-32 5.1E-37 274.7 24.9 345 67-428 18-399 (400)
31 3e9k_A Kynureninase; kynurenin 100.0 5.9E-33 2E-37 284.3 22.0 347 68-428 66-460 (465)
32 3lvm_A Cysteine desulfurase; s 100.0 2.8E-31 9.6E-36 267.6 28.7 344 66-428 19-398 (423)
33 1qz9_A Kynureninase; kynurenin 100.0 2.1E-30 7.2E-35 260.6 27.8 340 66-428 25-401 (416)
34 3a9z_A Selenocysteine lyase; P 100.0 4.8E-31 1.6E-35 267.0 22.9 349 64-428 13-427 (432)
35 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 3.4E-29 1.2E-33 247.6 18.2 333 69-429 8-370 (371)
36 3f9t_A TDC, L-tyrosine decarbo 100.0 9.6E-28 3.3E-32 238.5 27.1 325 74-427 35-396 (397)
37 3ffh_A Histidinol-phosphate am 100.0 4E-27 1.4E-31 232.6 29.7 309 69-425 32-362 (363)
38 3ly1_A Putative histidinol-pho 100.0 8.9E-27 3E-31 229.1 29.5 312 68-429 15-352 (354)
39 3get_A Histidinol-phosphate am 100.0 5E-27 1.7E-31 232.1 24.1 310 69-426 30-364 (365)
40 1gd9_A Aspartate aminotransfer 99.9 2.7E-26 9.3E-31 228.7 26.4 328 70-429 27-386 (389)
41 3dzz_A Putative pyridoxal 5'-p 99.9 8.3E-27 2.8E-31 232.1 22.6 329 67-428 25-388 (391)
42 2dgk_A GAD-beta, GADB, glutama 99.9 3.6E-26 1.2E-30 233.2 27.7 330 79-427 52-432 (452)
43 3euc_A Histidinol-phosphate am 99.9 3.5E-26 1.2E-30 226.1 26.5 311 69-427 30-366 (367)
44 3a2b_A Serine palmitoyltransfe 99.9 1.5E-26 5.2E-31 231.4 23.4 322 68-429 42-392 (398)
45 4dq6_A Putative pyridoxal phos 99.9 1.8E-26 6.2E-31 229.6 23.8 324 69-426 32-390 (391)
46 3tqx_A 2-amino-3-ketobutyrate 99.9 2.7E-26 9.2E-31 229.0 24.4 324 68-429 42-396 (399)
47 2w8t_A SPT, serine palmitoyltr 99.9 6.7E-26 2.3E-30 229.5 27.7 324 67-428 62-414 (427)
48 3hbx_A GAD 1, glutamate decarb 99.9 6.7E-26 2.3E-30 234.4 28.2 332 77-427 64-442 (502)
49 3fdb_A Beta C-S lyase, putativ 99.9 2.4E-26 8.3E-31 227.8 23.5 320 67-429 21-376 (377)
50 3kax_A Aminotransferase, class 99.9 1.4E-26 4.9E-31 229.8 21.1 326 68-426 23-382 (383)
51 3g0t_A Putative aminotransfera 99.9 1.7E-25 5.9E-30 226.4 29.2 337 69-428 44-436 (437)
52 3p1t_A Putative histidinol-pho 99.9 1.7E-25 5.9E-30 218.2 27.4 305 70-427 17-335 (337)
53 1b5p_A Protein (aspartate amin 99.9 8.9E-26 3.1E-30 225.2 25.8 325 69-427 31-383 (385)
54 1rv3_A Serine hydroxymethyltra 99.9 4.4E-27 1.5E-31 242.1 16.1 347 69-428 44-430 (483)
55 3h14_A Aminotransferase, class 99.9 9.9E-26 3.4E-30 224.9 25.3 325 67-429 29-382 (391)
56 3hdo_A Histidinol-phosphate am 99.9 5.6E-25 1.9E-29 217.2 30.0 315 69-429 26-355 (360)
57 1fc4_A 2-amino-3-ketobutyrate 99.9 1E-25 3.5E-30 225.5 24.6 321 68-428 44-396 (401)
58 1v2d_A Glutamine aminotransfer 99.9 2.9E-26 9.9E-31 228.0 20.2 317 70-428 26-370 (381)
59 2fnu_A Aminotransferase; prote 99.9 2.2E-25 7.5E-30 220.6 25.6 317 78-428 8-371 (375)
60 3dyd_A Tyrosine aminotransfera 99.9 2.8E-25 9.5E-30 224.9 25.7 326 68-429 53-424 (427)
61 1bs0_A Protein (8-amino-7-oxon 99.9 2E-25 6.9E-30 222.0 24.2 319 68-425 38-383 (384)
62 1j32_A Aspartate aminotransfer 99.9 1.3E-25 4.3E-30 223.8 22.7 328 68-428 29-386 (388)
63 3nra_A Aspartate aminotransfer 99.9 3.4E-26 1.1E-30 229.1 18.3 331 70-429 40-405 (407)
64 1svv_A Threonine aldolase; str 99.9 6.3E-26 2.2E-30 222.7 19.2 317 70-429 15-358 (359)
65 1wyu_A Glycine dehydrogenase ( 99.9 5.2E-25 1.8E-29 223.7 26.4 299 110-426 103-437 (438)
66 2o1b_A Aminotransferase, class 99.9 3.9E-25 1.3E-29 222.1 24.9 325 69-429 47-403 (404)
67 3l8a_A METC, putative aminotra 99.9 1.1E-25 3.7E-30 227.3 20.9 327 68-427 60-420 (421)
68 3cq5_A Histidinol-phosphate am 99.9 1.4E-24 4.9E-29 215.1 28.3 315 72-429 33-368 (369)
69 1o4s_A Aspartate aminotransfer 99.9 3.1E-25 1.1E-29 221.6 23.6 320 69-427 41-387 (389)
70 2z61_A Probable aspartate amin 99.9 2E-25 6.8E-30 221.1 22.0 316 69-427 29-369 (370)
71 1u08_A Hypothetical aminotrans 99.9 4E-25 1.4E-29 220.2 23.9 321 70-424 31-385 (386)
72 3mc6_A Sphingosine-1-phosphate 99.9 3.6E-24 1.2E-28 220.9 31.9 328 81-428 76-436 (497)
73 1d2f_A MALY protein; aminotran 99.9 6.5E-25 2.2E-29 218.9 25.2 325 70-428 29-388 (390)
74 1xi9_A Putative transaminase; 99.9 3E-25 1E-29 222.9 22.4 327 68-428 37-402 (406)
75 1lc5_A COBD, L-threonine-O-3-p 99.9 8.8E-25 3E-29 216.1 25.2 312 68-428 23-359 (364)
76 2dou_A Probable N-succinyldiam 99.9 7.2E-25 2.4E-29 217.6 23.6 320 68-426 24-375 (376)
77 2x5d_A Probable aminotransfera 99.9 7E-25 2.4E-29 220.5 23.6 325 68-429 36-398 (412)
78 1c7n_A Cystalysin; transferase 99.9 9E-25 3.1E-29 218.4 24.2 325 70-428 32-392 (399)
79 2z67_A O-phosphoseryl-tRNA(SEC 99.9 2.6E-26 9.1E-31 234.7 13.2 332 64-426 75-455 (456)
80 1yiz_A Kynurenine aminotransfe 99.9 1.3E-24 4.5E-29 219.6 24.4 330 70-427 38-427 (429)
81 4e1o_A HDC, histidine decarbox 99.9 1.9E-24 6.5E-29 222.4 25.0 341 68-428 78-477 (481)
82 2qma_A Diaminobutyrate-pyruvat 99.9 6E-24 2.1E-28 219.4 28.0 340 70-429 101-496 (497)
83 3ele_A Amino transferase; RER0 99.9 2E-24 6.9E-29 215.8 23.3 329 69-429 35-396 (398)
84 3mad_A Sphingosine-1-phosphate 99.9 4.3E-24 1.5E-28 221.4 26.5 301 110-428 134-468 (514)
85 2vi8_A Serine hydroxymethyltra 99.9 5.8E-25 2E-29 219.9 19.1 331 71-428 25-386 (405)
86 3fvs_A Kynurenine--oxoglutarat 99.9 1.7E-24 5.7E-29 218.1 22.6 331 69-428 28-421 (422)
87 3b46_A Aminotransferase BNA3; 99.9 1.1E-24 3.7E-29 221.9 21.4 327 68-425 56-443 (447)
88 2o0r_A RV0858C (N-succinyldiam 99.9 6.1E-25 2.1E-29 220.9 19.2 326 71-428 27-395 (411)
89 3ezs_A Aminotransferase ASPB; 99.9 3.6E-24 1.2E-28 212.2 24.5 314 70-429 24-375 (376)
90 3ftb_A Histidinol-phosphate am 99.9 6.9E-24 2.4E-28 208.9 26.3 310 67-428 24-360 (361)
91 2zyj_A Alpha-aminodipate amino 99.9 4.2E-25 1.4E-29 221.0 17.5 323 69-428 32-392 (397)
92 3jtx_A Aminotransferase; NP_28 99.9 5.8E-24 2E-28 212.2 25.7 322 67-426 28-395 (396)
93 2gb3_A Aspartate aminotransfer 99.9 5E-24 1.7E-28 214.2 25.3 322 69-428 43-401 (409)
94 2dkj_A Serine hydroxymethyltra 99.9 3.9E-25 1.3E-29 221.4 17.0 336 69-428 23-387 (407)
95 3k40_A Aromatic-L-amino-acid d 99.9 2.3E-24 8E-29 221.4 22.7 339 69-428 74-470 (475)
96 1bw0_A TAT, protein (tyrosine 99.9 1.7E-24 5.9E-29 217.7 21.3 328 70-429 34-413 (416)
97 2oga_A Transaminase; PLP-depen 99.9 3.1E-24 1E-28 215.2 22.1 324 69-428 30-395 (399)
98 3vp6_A Glutamate decarboxylase 99.9 8.2E-24 2.8E-28 219.2 25.7 342 68-427 95-503 (511)
99 2a7v_A Serine hydroxymethyltra 99.9 1.3E-24 4.4E-29 223.1 19.4 347 70-427 55-439 (490)
100 3op7_A Aminotransferase class 99.9 1.1E-23 3.9E-28 208.7 25.1 285 119-429 67-371 (375)
101 2bwn_A 5-aminolevulinate synth 99.9 2.7E-24 9.2E-29 215.3 20.5 310 81-428 61-399 (401)
102 2zc0_A Alanine glyoxylate tran 99.9 1E-23 3.4E-28 211.4 24.4 322 70-428 35-403 (407)
103 3kki_A CAI-1 autoinducer synth 99.9 4.9E-24 1.7E-28 214.2 22.2 307 81-428 74-403 (409)
104 3qgu_A LL-diaminopimelate amin 99.9 8.5E-24 2.9E-28 215.0 24.1 331 68-428 68-439 (449)
105 3fkd_A L-threonine-O-3-phospha 99.9 2.9E-23 9.8E-28 204.0 27.1 307 68-429 14-342 (350)
106 1fg7_A Histidinol phosphate am 99.9 9E-24 3.1E-28 208.6 23.4 274 117-425 60-354 (356)
107 2jis_A Cysteine sulfinic acid 99.9 6.1E-24 2.1E-28 220.4 23.0 302 110-427 143-513 (515)
108 1vp4_A Aminotransferase, putat 99.9 1.6E-24 5.3E-29 219.1 18.0 325 68-428 42-417 (425)
109 3aow_A Putative uncharacterize 99.9 1.2E-23 4E-28 214.5 23.9 327 68-428 75-444 (448)
110 3n0l_A Serine hydroxymethyltra 99.9 7.6E-24 2.6E-28 212.6 22.0 334 70-428 26-388 (417)
111 1js3_A DDC;, DOPA decarboxylas 99.9 1.4E-23 4.7E-28 216.1 24.1 338 70-428 75-473 (486)
112 3asa_A LL-diaminopimelate amin 99.9 1.1E-23 3.8E-28 211.1 22.3 328 69-428 33-392 (400)
113 3e2y_A Kynurenine-oxoglutarate 99.9 1.6E-23 5.6E-28 209.9 23.5 327 69-425 23-409 (410)
114 1uu1_A Histidinol-phosphate am 99.9 1.7E-23 5.8E-28 204.6 22.9 298 70-425 20-334 (335)
115 3uwc_A Nucleotide-sugar aminot 99.9 1.5E-23 5.2E-28 207.5 22.5 322 70-429 7-371 (374)
116 2okj_A Glutamate decarboxylase 99.9 3.9E-23 1.3E-27 213.7 26.1 302 110-428 127-501 (504)
117 3dr4_A Putative perosamine syn 99.9 2.4E-23 8.1E-28 207.8 22.4 328 69-426 22-390 (391)
118 1wyu_B Glycine dehydrogenase s 99.9 1.4E-22 4.9E-27 208.0 28.4 328 80-427 77-439 (474)
119 3frk_A QDTB; aminotransferase, 99.9 1.5E-23 5.2E-28 207.9 19.8 322 71-429 5-368 (373)
120 1v72_A Aldolase; PLP-dependent 99.9 1E-23 3.6E-28 206.8 17.7 309 77-428 16-352 (356)
121 1b9h_A AHBA synthase, protein 99.9 1.4E-22 4.6E-27 202.0 25.8 318 81-428 15-387 (388)
122 3ecd_A Serine hydroxymethyltra 99.9 1.8E-23 6.1E-28 210.3 19.6 335 70-428 33-396 (425)
123 1o69_A Aminotransferase; struc 99.9 6.6E-23 2.3E-27 205.2 22.6 315 80-428 9-386 (394)
124 1pff_A Methionine gamma-lyase; 99.9 8.2E-23 2.8E-27 199.2 22.4 273 119-425 2-330 (331)
125 1mdo_A ARNB aminotransferase; 99.9 2.6E-22 8.8E-27 200.0 26.3 327 70-428 9-385 (393)
126 2x5f_A Aspartate_tyrosine_phen 99.9 1.9E-23 6.4E-28 211.3 17.9 327 69-428 47-428 (430)
127 1iay_A ACC synthase 2, 1-amino 99.9 3.9E-23 1.3E-27 208.8 19.3 286 119-429 87-427 (428)
128 3rq1_A Aminotransferase class 99.9 1.2E-22 4.1E-27 204.5 22.1 328 69-429 38-415 (418)
129 2r2n_A Kynurenine/alpha-aminoa 99.9 3.5E-22 1.2E-26 202.0 25.2 289 115-428 82-423 (425)
130 2c81_A Glutamine-2-deoxy-scyll 99.9 4.8E-22 1.6E-26 200.3 26.0 332 78-428 11-413 (418)
131 3tcm_A Alanine aminotransferas 99.9 1.8E-22 6.2E-27 208.6 22.4 330 68-428 94-493 (500)
132 3gbx_A Serine hydroxymethyltra 99.9 3.8E-23 1.3E-27 207.6 16.8 333 71-428 32-395 (420)
133 3ei9_A LL-diaminopimelate amin 99.9 5.7E-22 2E-26 200.5 25.0 330 68-427 55-426 (432)
134 3piu_A 1-aminocyclopropane-1-c 99.9 1.5E-22 5.2E-27 205.0 20.6 284 119-428 90-431 (435)
135 3g7q_A Valine-pyruvate aminotr 99.9 6.9E-23 2.4E-27 205.8 17.8 330 69-428 31-412 (417)
136 3nyt_A Aminotransferase WBPE; 99.9 6.2E-22 2.1E-26 196.1 24.3 319 72-427 5-362 (367)
137 3h7f_A Serine hydroxymethyltra 99.9 1.9E-22 6.4E-27 205.5 21.1 336 70-428 46-413 (447)
138 2x3l_A ORN/Lys/Arg decarboxyla 99.9 3.1E-23 1.1E-27 211.3 14.3 279 116-428 58-352 (446)
139 1jg8_A L-ALLO-threonine aldola 99.9 7.7E-23 2.6E-27 200.4 15.8 306 80-429 15-346 (347)
140 3b8x_A WBDK, pyridoxamine 5-ph 99.9 6.4E-21 2.2E-25 190.2 29.7 317 72-423 4-390 (390)
141 3if2_A Aminotransferase; YP_26 99.9 4.3E-23 1.5E-27 209.4 13.0 336 69-428 31-439 (444)
142 2eh6_A Acoat, acetylornithine 99.9 1.6E-21 5.6E-26 193.0 23.9 311 69-425 28-374 (375)
143 1vef_A Acetylornithine/acetyl- 99.9 5.5E-22 1.9E-26 198.1 20.5 321 69-426 45-394 (395)
144 2po3_A 4-dehydrase; external a 99.9 6.8E-21 2.3E-25 192.3 27.1 319 79-428 28-385 (424)
145 2fq6_A Cystathionine beta-lyas 99.9 1.4E-21 4.8E-26 197.1 21.9 278 115-424 82-413 (415)
146 2rfv_A Methionine gamma-lyase; 99.9 5.5E-22 1.9E-26 198.8 18.7 314 73-425 30-396 (398)
147 1c4k_A Protein (ornithine deca 99.9 1.6E-21 5.6E-26 208.6 22.6 300 116-428 174-565 (730)
148 3ruy_A Ornithine aminotransfer 99.9 2.3E-21 7.7E-26 193.4 22.2 318 68-426 35-391 (392)
149 3fsl_A Aromatic-amino-acid ami 99.9 6E-22 2.1E-26 197.6 17.8 318 69-425 26-396 (397)
150 2cb1_A O-acetyl homoserine sul 99.9 4.6E-21 1.6E-25 193.1 24.3 283 115-424 56-411 (412)
151 3t18_A Aminotransferase class 99.9 1.2E-21 4E-26 197.0 18.6 325 70-426 38-411 (413)
152 1e5e_A MGL, methionine gamma-l 99.9 5.1E-20 1.8E-24 185.1 29.3 275 115-427 62-393 (404)
153 2ay1_A Aroat, aromatic amino a 99.9 6.7E-22 2.3E-26 197.2 15.3 319 69-425 26-392 (394)
154 1gc0_A Methionine gamma-lyase; 99.9 6.1E-21 2.1E-25 191.3 22.3 278 115-425 65-397 (398)
155 4f4e_A Aromatic-amino-acid ami 99.9 2.3E-21 7.8E-26 195.6 19.2 319 69-426 49-419 (420)
156 3bwn_A AT1G70560, L-tryptophan 99.9 3.1E-21 1.1E-25 193.1 19.7 279 118-427 71-385 (391)
157 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 2.9E-20 9.9E-25 188.6 27.0 317 80-429 40-436 (437)
158 3ihj_A Alanine aminotransferas 99.9 1.1E-20 3.8E-25 195.1 24.1 317 81-428 102-492 (498)
159 1n8p_A Cystathionine gamma-lya 99.9 1.9E-21 6.5E-26 194.9 17.8 277 116-426 56-392 (393)
160 1cs1_A CGS, protein (cystathio 99.9 1.7E-20 5.9E-25 187.0 24.0 278 116-426 53-384 (386)
161 7aat_A Aspartate aminotransfer 99.9 4.5E-21 1.5E-25 191.8 19.2 313 74-426 40-400 (401)
162 1ibj_A CBL, cystathionine beta 99.9 3.5E-21 1.2E-25 197.0 17.9 278 116-429 134-462 (464)
163 1qgn_A Protein (cystathionine 99.9 7.3E-21 2.5E-25 193.4 19.9 279 115-428 114-444 (445)
164 1yaa_A Aspartate aminotransfer 99.9 3.6E-21 1.2E-25 193.3 17.4 308 79-429 46-411 (412)
165 3b1d_A Betac-S lyase; HET: PLP 99.8 1.6E-23 5.5E-28 209.2 0.0 324 70-427 32-391 (392)
166 3ez1_A Aminotransferase MOCR f 99.9 2.9E-20 9.8E-25 187.4 23.5 323 70-428 26-414 (423)
167 1ajs_A Aspartate aminotransfer 99.9 1.2E-20 4E-25 189.4 20.4 320 69-428 30-410 (412)
168 1s0a_A Adenosylmethionine-8-am 99.9 7.4E-20 2.5E-24 184.9 26.0 315 81-428 60-423 (429)
169 2ord_A Acoat, acetylornithine 99.9 1E-20 3.4E-25 189.1 19.0 302 81-428 57-396 (397)
170 3d6k_A Putative aminotransfera 99.9 1.5E-20 5.1E-25 189.7 20.4 283 118-428 79-417 (422)
171 3cog_A Cystathionine gamma-lya 99.9 1.2E-20 4.1E-25 189.7 19.6 275 117-427 69-400 (403)
172 3ppl_A Aspartate aminotransfer 99.9 1.3E-20 4.4E-25 190.4 19.8 284 118-428 81-419 (427)
173 3qhx_A Cystathionine gamma-syn 99.9 2.3E-20 7.8E-25 186.9 21.1 276 115-422 66-391 (392)
174 2q7w_A Aspartate aminotransfer 99.9 4.4E-21 1.5E-25 191.3 15.5 317 70-425 27-395 (396)
175 4adb_A Succinylornithine trans 99.9 1.1E-20 3.7E-25 189.0 17.6 320 68-428 38-399 (406)
176 2aeu_A Hypothetical protein MJ 99.8 8.6E-21 3E-25 188.8 16.3 308 70-428 29-370 (374)
177 2vyc_A Biodegradative arginine 99.8 1.2E-20 4.1E-25 203.4 18.5 294 115-427 205-603 (755)
178 1sff_A 4-aminobutyrate aminotr 99.8 3.7E-20 1.3E-24 186.5 20.5 316 81-428 58-423 (426)
179 3meb_A Aspartate aminotransfer 99.8 5.6E-20 1.9E-24 187.2 21.4 316 72-428 59-443 (448)
180 3ju7_A Putative PLP-dependent 99.8 2.9E-19 1E-23 178.0 25.4 318 79-428 12-374 (377)
181 3nx3_A Acoat, acetylornithine 99.8 1.6E-19 5.4E-24 180.3 23.3 321 68-428 35-394 (395)
182 3f6t_A Aspartate aminotransfer 99.8 1.2E-19 4E-24 188.9 23.0 340 71-428 105-524 (533)
183 3acz_A Methionine gamma-lyase; 99.8 2.8E-19 9.6E-24 178.7 24.1 274 115-423 59-387 (389)
184 2oat_A Ornithine aminotransfer 99.8 1.8E-19 6.2E-24 183.0 22.5 317 67-428 74-438 (439)
185 1ax4_A Tryptophanase; tryptoph 99.8 5.5E-20 1.9E-24 187.7 18.2 289 117-428 78-440 (467)
186 1z7d_A Ornithine aminotransfer 99.8 2E-18 6.9E-23 175.0 26.5 317 68-428 64-428 (433)
187 2pb2_A Acetylornithine/succiny 99.8 4E-19 1.4E-23 179.3 20.7 317 68-428 56-417 (420)
188 3a8u_X Omega-amino acid--pyruv 99.8 2.4E-19 8.2E-24 182.3 18.8 320 81-428 67-446 (449)
189 3ndn_A O-succinylhomoserine su 99.8 5.6E-19 1.9E-23 178.1 20.0 276 116-426 82-413 (414)
190 2ez2_A Beta-tyrosinase, tyrosi 99.8 8.2E-19 2.8E-23 178.5 20.7 314 77-428 52-430 (456)
191 3dxv_A Alpha-amino-epsilon-cap 99.8 2E-18 6.9E-23 174.9 23.1 322 68-428 42-424 (439)
192 3i4j_A Aminotransferase, class 99.8 4.6E-18 1.6E-22 171.8 23.6 313 82-428 47-427 (430)
193 3pj0_A LMO0305 protein; struct 99.8 2E-19 6.7E-24 176.9 13.1 313 71-425 15-358 (359)
194 2hox_A ALLIIN lyase 1; cystein 99.8 2.5E-18 8.5E-23 174.1 21.4 323 68-428 55-424 (427)
195 2zy4_A L-aspartate beta-decarb 99.8 5.4E-18 1.8E-22 176.7 24.4 284 135-428 167-521 (546)
196 1zod_A DGD, 2,2-dialkylglycine 99.8 2.3E-19 7.7E-24 181.4 13.4 316 81-428 60-431 (433)
197 2eo5_A 419AA long hypothetical 99.8 3.4E-18 1.2E-22 172.4 21.9 303 82-428 61-417 (419)
198 3ri6_A O-acetylhomoserine sulf 99.8 3.2E-18 1.1E-22 173.3 19.6 285 115-426 82-429 (430)
199 3lws_A Aromatic amino acid bet 99.8 3.2E-18 1.1E-22 168.2 19.0 314 74-426 15-356 (357)
200 2ctz_A O-acetyl-L-homoserine s 99.8 2.9E-18 1E-22 173.2 19.0 287 115-426 58-420 (421)
201 3jzl_A Putative cystathionine 99.8 6.8E-18 2.3E-22 169.7 20.6 277 83-389 32-339 (409)
202 2oqx_A Tryptophanase; lyase, p 99.8 4E-19 1.4E-23 181.3 11.2 314 83-428 53-441 (467)
203 4eu1_A Mitochondrial aspartate 99.8 3.6E-18 1.2E-22 171.3 17.6 274 119-426 83-408 (409)
204 3n5m_A Adenosylmethionine-8-am 99.8 4.8E-18 1.6E-22 172.9 18.4 326 68-428 48-451 (452)
205 3k7y_A Aspartate aminotransfer 99.8 5.2E-18 1.8E-22 170.5 15.6 322 69-428 29-404 (405)
206 3i16_A Aluminum resistance pro 99.8 5.2E-18 1.8E-22 171.3 15.5 249 117-389 75-356 (427)
207 3gju_A Putative aminotransfera 99.8 8.6E-17 3E-21 164.1 24.7 332 67-428 49-455 (460)
208 3tfu_A Adenosylmethionine-8-am 99.8 3.2E-17 1.1E-21 167.4 20.8 325 70-428 76-452 (457)
209 4ffc_A 4-aminobutyrate aminotr 99.8 8.2E-17 2.8E-21 164.1 23.1 328 67-428 62-448 (453)
210 3dod_A Adenosylmethionine-8-am 99.7 3.3E-16 1.1E-20 159.2 26.2 318 81-428 61-442 (448)
211 3l44_A Glutamate-1-semialdehyd 99.7 8.9E-17 3E-21 162.5 21.5 321 67-428 53-429 (434)
212 3oks_A 4-aminobutyrate transam 99.7 7.8E-17 2.7E-21 164.1 21.1 327 68-428 60-450 (451)
213 4a6r_A Omega transaminase; tra 99.7 5.1E-17 1.7E-21 165.8 19.5 331 68-428 49-448 (459)
214 3hvy_A Cystathionine beta-lyas 99.7 5.5E-17 1.9E-21 163.8 19.0 246 117-388 76-355 (427)
215 2cjg_A L-lysine-epsilon aminot 99.7 3.7E-17 1.3E-21 166.4 17.8 314 81-428 71-447 (449)
216 3n75_A LDC, lysine decarboxyla 99.7 5.3E-17 1.8E-21 172.6 19.2 290 115-427 195-558 (715)
217 3fq8_A Glutamate-1-semialdehyd 99.7 3.4E-17 1.2E-21 165.2 16.6 319 68-428 51-426 (427)
218 3nmy_A Xometc, cystathionine g 99.7 1.9E-16 6.4E-21 158.9 20.0 275 116-423 68-397 (400)
219 2epj_A Glutamate-1-semialdehyd 99.7 1.1E-16 3.9E-21 161.8 18.3 317 68-428 55-430 (434)
220 3hmu_A Aminotransferase, class 99.7 6.2E-16 2.1E-20 158.4 23.0 328 67-428 53-451 (472)
221 4h51_A Aspartate aminotransfer 99.7 3.2E-16 1.1E-20 157.9 20.5 322 71-428 46-416 (420)
222 3i5t_A Aminotransferase; pyrid 99.7 6.9E-16 2.3E-20 158.3 22.3 331 67-428 52-453 (476)
223 3k28_A Glutamate-1-semialdehyd 99.7 2.2E-16 7.7E-21 159.4 17.2 323 67-428 51-426 (429)
224 3ht4_A Aluminum resistance pro 99.7 1.1E-16 3.8E-21 162.0 13.8 246 117-388 67-344 (431)
225 4e77_A Glutamate-1-semialdehyd 99.7 1.7E-15 5.9E-20 152.9 22.3 324 67-428 51-428 (429)
226 2e7u_A Glutamate-1-semialdehyd 99.7 1.3E-15 4.4E-20 153.5 20.1 313 68-425 51-423 (424)
227 1ohv_A 4-aminobutyrate aminotr 99.7 7.4E-16 2.5E-20 157.9 17.2 329 67-428 61-470 (472)
228 3ou5_A Serine hydroxymethyltra 99.7 5.1E-15 1.7E-19 147.0 20.4 348 69-427 54-439 (490)
229 2cy8_A D-phgat, D-phenylglycin 99.6 1.1E-14 3.7E-19 148.1 22.0 313 69-428 57-434 (453)
230 3bc8_A O-phosphoseryl-tRNA(SEC 99.5 1.1E-13 3.6E-18 139.4 17.2 294 111-427 94-441 (450)
231 2yky_A Beta-transaminase; tran 99.2 1.8E-15 6.1E-20 154.3 0.0 318 67-428 98-459 (465)
232 3hl2_A O-phosphoseryl-tRNA(SEC 99.4 3E-12 1E-16 127.7 17.3 285 120-428 122-460 (501)
233 4atq_A 4-aminobutyrate transam 99.2 3.1E-09 1E-13 107.9 24.6 322 81-430 81-456 (456)
234 4ao9_A Beta-phenylalanine amin 99.2 1.6E-10 5.4E-15 117.1 13.2 316 66-429 84-446 (454)
235 4e3q_A Pyruvate transaminase; 98.9 1.1E-07 3.9E-12 96.7 20.8 336 67-428 65-467 (473)
236 4a0g_A Adenosylmethionine-8-am 98.7 4.8E-08 1.6E-12 106.1 13.1 201 209-428 595-827 (831)
237 2llz_A Uncharacterized protein 26.3 1.3E+02 0.0044 22.9 5.3 59 366-424 12-77 (100)
238 2gjh_A Designed protein; oblig 25.9 1.2E+02 0.004 19.8 4.3 27 401-428 3-29 (62)
No 1
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=100.00 E-value=6.9e-58 Score=453.85 Aligned_cols=354 Identities=45% Similarity=0.749 Sum_probs=310.8
Q ss_pred CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610 68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF 147 (430)
Q Consensus 68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~ 147 (430)
.+++|||+|||+++|++|+++|.+++.+++++|.|.++++|+++++.++++++|+.+++++|++++++|+|+|+|+|+++
T Consensus 3 ~~~~~~f~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~ 82 (361)
T 3m5u_A 3 AMRKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQF 82 (361)
T ss_dssp -CCCEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred ccceEeecCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHH
Confidence 35899999999999999999999999888899999998899999999999999999999999986568998789999999
Q ss_pred HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCC-CCccccccCCCccEEEEeecCCCccccC
Q 043610 148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKI-PNFDALEQNPDAKYLHICANETIHGVEF 225 (430)
Q Consensus 148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~-~d~~~l~i~~~~~lv~i~~~~t~tG~~~ 225 (430)
++++.+++ +||+++++.++.|+++|...+++.| ++++++...+ +.. +++++ +++++|++|+++|++|.||+++
T Consensus 83 n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~---g~~~~~~~~-~l~~~t~lv~~~~~e~~tG~~~ 157 (361)
T 3m5u_A 83 AMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEE---SNFDHIPRV-EFSDNADYAYICSNNTIYGTQY 157 (361)
T ss_dssp HHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTT---TTSCSCCCC-CCCTTSSEEEEESEETTTTEEC
T ss_pred HHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccC---cCCCcCChh-hcCCCCCEEEEeCCCCCcceeC
Confidence 99999998 8999988889999999999999998 9888887532 211 23333 3678999999999999999999
Q ss_pred CCCccccCCCcEEEEeccCcCCCCccccccccEEEeCCCccccCCccEEEEEcHHHHhccCC-CCCccccccchhhcCCC
Q 043610 226 KEYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQD-KTPLMLDYKIHDENNSL 304 (430)
Q Consensus 226 pei~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~-~~p~~~~~~~~~~~~~~ 304 (430)
|+|++ +|++++||++|++|++|+|++++|++++|+|||+||+|+|++|+++++++.+.+ ..|.+++|....+.+.+
T Consensus 158 ~~i~~---~~~~~~vD~~q~~g~~~id~~~~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 234 (361)
T 3m5u_A 158 QNYPK---TKTPLIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSL 234 (361)
T ss_dssp SSCCC---CSSCEEEECGGGTTSSCCCCTTEEEEEEETTTTSSCTTCEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTC
T ss_pred Ccccc---cCCEEEEEcccccCCCCCCcccCCEEEEechhccCCCccEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCC
Confidence 87554 499999999999999999999999999999999999999999999999988766 56778877665566778
Q ss_pred CCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCc-eecCCCCCCCccceEEEEcCC-CchhHHHH
Q 043610 305 YNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGF-YKCPVEKSVRSFMNVPFTLEK-SDLEAEFV 382 (430)
Q Consensus 305 ~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~-~~~~~~~~~rs~~iv~f~~~~-~~~~~~~~ 382 (430)
+||||+++++++.+||+++.+++|++++.+|+++++++++++|++..|+ .+. .++..|++++++|.+++ .+.+.++.
T Consensus 235 ~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~-~~~~~rs~~ivsf~~~~~~~~~~~~~ 313 (361)
T 3m5u_A 235 FNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGH-ADKKDRSLMNVSFNIAKNKDLEPLFV 313 (361)
T ss_dssp SSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEES-SCGGGBCSSEEEEEESSCTTHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeecc-CCHHHcCCeEEEEECCCchhhhHHHH
Confidence 8999999999999999999865589999999999999999999974445 554 34556888899999985 34455788
Q ss_pred HHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhhC
Q 043610 383 KEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 430 (430)
Q Consensus 383 ~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~~ 430 (430)
..|.++||.+..|++..+++|||+++|+|++||++++++|+++.++|+
T Consensus 314 ~~L~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~~~~~ 361 (361)
T 3m5u_A 314 KEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEFQGKYA 361 (361)
T ss_dssp HHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHHHHHHHhcC
Confidence 899999999998988778899999999999999999999999999885
No 2
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=100.00 E-value=6.3e-59 Score=465.31 Aligned_cols=356 Identities=50% Similarity=0.866 Sum_probs=285.2
Q ss_pred CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610 69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA 148 (430)
Q Consensus 69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~ 148 (430)
.++|||+|||+++|++|+++|.+++.+++++|+|.++++|+++++.++++++|+.+++++|++++++|+|+++|+|++++
T Consensus 26 ~~~yl~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n 105 (386)
T 3qm2_A 26 AQVFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFA 105 (386)
T ss_dssp -CCEECCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHH
T ss_pred ccCccccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHH
Confidence 56899999999999999999999998888899998888999999999999999999999999765689987899999999
Q ss_pred HHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhCCceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcccc-C
Q 043610 149 AVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVE-F 225 (430)
Q Consensus 149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~-~ 225 (430)
+++.+++++||+++++.+++|+++|...+++.|++.+++... .++|..+++++++ ++++|++|+++|++|.||++ +
T Consensus 106 ~ai~~l~~~gd~v~~~~~~~~~~~~~~~a~~~G~v~~v~~~~-~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~ 184 (386)
T 3qm2_A 106 GVPLNLLGDKTTADYVDAGYWAASAIKEAKKYCAPQIIDAKI-TVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAID 184 (386)
T ss_dssp HHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEE-EETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECC
T ss_pred HHHHhccCCCCeEEEEeCCHHHHHHHHHHHHhCCeEEEecCc-ccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecC
Confidence 999999999999999999999999998888888666666640 0155335667776 78999999999999999997 6
Q ss_pred C--CCccccCCCcEEEEeccCcCCCCccccccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCC
Q 043610 226 K--EYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNS 303 (430)
Q Consensus 226 p--ei~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~ 303 (430)
| +|+ +|++++||++|++|++|+|++++|++++|+|||+||+|+|++|+++++++.+.+..|.+++|....+.+.
T Consensus 185 pi~~i~----~g~~~~vDa~qs~g~~pidv~~~~~~~~s~hK~lGP~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~ 260 (386)
T 3qm2_A 185 ETPDFG----PEVVVTADFSSTILSAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDS 260 (386)
T ss_dssp CCCCCC----TTCCEEEECTTTTTSSCCCGGGCSEEEEETTTTTCCTTEEEEEEEGGGCSCCCTTSCGGGCHHHHHHC--
T ss_pred chhhhc----CCCEEEEEcccccCCCCCCccccCEEEEecccccCCCccEEEEECHHHHhhhcccCCcHHHHHHHhhcCC
Confidence 6 554 7999999999999999999999999999999999999999999999999888777777777766667777
Q ss_pred CCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHH
Q 043610 304 LYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVK 383 (430)
Q Consensus 304 ~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~ 383 (430)
++||||+++++++.+||+++.+.+|++++.+|+++++++++++|++ .|+.....++..|++++++|.+++.+.+.+++.
T Consensus 261 ~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~-~~~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~ 339 (386)
T 3qm2_A 261 MFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDN-SDFYRNDVAQANRSRMNVPFQLADNTLDKVFLE 339 (386)
T ss_dssp -----CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHT-CSSEECCBCGGGBCSSEEEEEESSGGGHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-CCCcccCCCHHHcCceEEEEECCCccccHHHHH
Confidence 8899999999999999999986658999999999999999999997 576443335567888899999985345557888
Q ss_pred HHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhhC
Q 043610 384 EAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 430 (430)
Q Consensus 384 ~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~~ 430 (430)
.|.++||.+..|++..+++|||++++||++||++++++|+++.++|+
T Consensus 340 ~L~~~gI~~~~g~~~~~~iRiS~~~~~t~edId~l~~~l~~~~~~~~ 386 (386)
T 3qm2_A 340 ESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERRHG 386 (386)
T ss_dssp HHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHCCCEEeCCCCCcCeEEEEcCCCCCHHHHHHHHHHHHHHHHhcC
Confidence 89999999988988778899999999999999999999999999874
No 3
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=100.00 E-value=1.2e-57 Score=453.94 Aligned_cols=359 Identities=50% Similarity=0.802 Sum_probs=311.4
Q ss_pred CCCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610 66 GQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATT 145 (430)
Q Consensus 66 ~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~ 145 (430)
..-+-..+++++++++|++|+++|.+++.+++++|.|.++++|+++++.++++++|+.+++++|++++++|+|+++|+|+
T Consensus 9 ~~~~~~~~n~at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~ 88 (377)
T 3e77_A 9 SGVDLGTENLYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCG 88 (377)
T ss_dssp ------CCCEECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHH
T ss_pred cccCcccccccccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHH
Confidence 34445667888999999999999999999999999999889999999999999999999999999876689998899999
Q ss_pred HHHHHHhhcCCC--CCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610 146 QFAAVPLNLCTP--NDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI 220 (430)
Q Consensus 146 a~~~~~~sl~~~--gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~ 220 (430)
++++++.+++.+ ||+++++.+++|+++|.+.+++.| .+.+++.. ++...++++++ ++++|++|+++|++|+
T Consensus 89 a~n~a~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~----~~~~~~~~~~~~~i~~~t~lV~~~h~et~ 164 (377)
T 3e77_A 89 QFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKL----GSYTKIPDPSTWNLNPDASYVYYCANETV 164 (377)
T ss_dssp HHHHHHHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCC----SSSCSCCCGGGCCCCTTCSCEEEESEETT
T ss_pred HHHHHHHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccC----CCcCCCCChHHhccCCCccEEEEeCccCc
Confidence 999999999754 899999999999999999898888 55544442 22234556665 7899999999999999
Q ss_pred ccccCCCCccccCCCcEEEEeccCcCCCCccccccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhh
Q 043610 221 HGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDE 300 (430)
Q Consensus 221 tG~~~pei~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~ 300 (430)
||+++|-|+ +++|++++||++|++|++|+|++++|++++|+|||+||+|+|++|+++++++.+.+..|.+++|....+
T Consensus 165 tG~~~pii~--~~~~~~~~vD~~q~~g~~~id~~~~~~~~~s~~K~~gp~G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~ 242 (377)
T 3e77_A 165 HGVEFDFIP--DVKGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAG 242 (377)
T ss_dssp TTEECSSCC--CCTTCCEEEECTTTTTSSCCCGGGCSEEEEEGGGTTSCTTCEEEEEETTSCSCCCTTSCGGGCHHHHHT
T ss_pred hheEchhhh--ccCCCEEEEEcccccCCCCCchhhcCEEEEecccccCCCccEEEEEcHHHHhhccCCCCchhhHHHHhh
Confidence 999999742 478999999999999999999999999999999999999999999999999888777788888776666
Q ss_pred cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC----c
Q 043610 301 NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS----D 376 (430)
Q Consensus 301 ~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~----~ 376 (430)
++.++||||+++++++.+||+++.+++|++++.+|+++++++++++|++..|+++.+.++..|++++++|.+++. +
T Consensus 243 ~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~ 322 (377)
T 3e77_A 243 NSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDA 322 (377)
T ss_dssp TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTCCHH
T ss_pred cCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCCchh
Confidence 677889999999999999999998766899999999999999999999866888765466678988899999852 1
Q ss_pred hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhhC
Q 043610 377 LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 430 (430)
Q Consensus 377 ~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~~ 430 (430)
.+..++..|.++||.+..|++..+++|+|+++++|++||++|+++|++++++|+
T Consensus 323 ~~~~~l~~l~~~Gi~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~~~~~ 376 (377)
T 3e77_A 323 LEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMHQ 376 (377)
T ss_dssp HHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCcEEeCCCCcCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 224678888889999999998888999999999999999999999999999875
No 4
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=100.00 E-value=3.5e-46 Score=369.62 Aligned_cols=357 Identities=47% Similarity=0.827 Sum_probs=292.9
Q ss_pred CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610 69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA 148 (430)
Q Consensus 69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~ 148 (430)
.++|++++||+++|+.|++++.+.+.++.+.|.+.+..+|+++.+.+.++++++.+++++|++++++++++++|+|++++
T Consensus 3 ~~~~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~ 82 (362)
T 2c0r_A 3 ERAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFA 82 (362)
T ss_dssp CCCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHH
T ss_pred cceeeccCCCCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHH
Confidence 46899999999999999999999987776667776656778888888999999999999999764466667789999999
Q ss_pred HHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhCCceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCCCC
Q 043610 149 AVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEY 228 (430)
Q Consensus 149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~pei 228 (430)
.++.++++|||+|+++.+++|+++|...++..|+++.++...+.+++..+|.+++++++++++|+++|++|+||+.++++
T Consensus 83 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~i~~~t~~v~~~~~~n~tG~~~~~l 162 (362)
T 2c0r_A 83 MIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQDNAAYLHLTSNETIEGAQFKAF 162 (362)
T ss_dssp HHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGGTTCSCCCGGGCCCCTTEEEEEEESEETTTTEECSSC
T ss_pred HHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhCCeEEEecccccccccCCCHHHcccCCCcCEEEEeCCcCccceecccc
Confidence 99999999999999888888988776667776766667664211244345666655788999999999999999975545
Q ss_pred ccccCCCcEEEEeccCcCCCCccccccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCc
Q 043610 229 PSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTP 308 (430)
Q Consensus 229 ~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~ 308 (430)
.++ +|+++++|++|++|..++++.++|++++|+|||+||+|+|++++++++++.+.+..|.++++....+.+...+|+
T Consensus 163 ~~i--~~~~vivD~a~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~ 240 (362)
T 2c0r_A 163 PDT--GSVPLIGDMSSDILSRPFDLNQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTP 240 (362)
T ss_dssp CCC--TTSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCC
T ss_pred ccc--CCCEEEEEChhhccCCccchhHCcEEEEeccccccCcCcEEEEEcHHHHhhccccCchHHhHHHHhhccCcCCCc
Confidence 555 899999999999999999998889999999999999999999999999887765556666654443445566899
Q ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCC-c-eecCCCCCCCccceEEEEcCCCchhH-HHHHHH
Q 043610 309 PCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNG-F-YKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEA 385 (430)
Q Consensus 309 ~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G-~-~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L 385 (430)
|.+.++++.++|+++.+.+|++++.+++++++++++++|++ .| + .+.. ++..++.++++|.+++ +.+. ++.+.|
T Consensus 241 ~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~L 317 (362)
T 2c0r_A 241 PSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQ-SGGFYRGCV-DVDSRSDMNITFRLAS-EELEKEFVKAS 317 (362)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT-STTSSEESS-CGGGBCSSEEEEECSC-HHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-cCCccccCC-ChHHcCCcEEEEEcCC-cchHHHHHHHH
Confidence 99999999999998765447899999999999999999997 56 6 6642 2334566788888874 2333 799999
Q ss_pred HHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhhC
Q 043610 386 AKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 430 (430)
Q Consensus 386 ~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~~ 430 (430)
.++||.+.+|+...+++|||++.+++++|+++++++|++++++|.
T Consensus 318 ~~~gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~~~~~ 362 (362)
T 2c0r_A 318 EQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKRSRG 362 (362)
T ss_dssp HHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred HHCCCeeccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhcC
Confidence 999998887776567899999999999999999999999988763
No 5
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=100.00 E-value=1.4e-38 Score=314.13 Aligned_cols=352 Identities=45% Similarity=0.775 Sum_probs=274.3
Q ss_pred CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH-HHHH
Q 043610 69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA-TTQF 147 (430)
Q Consensus 69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga-T~a~ 147 (430)
+++|++++||.++|+.|++++.+.+.++.+.|.+.+..+++++.+.+.++++++.+++++|+++.++|+++ +|+ |+|+
T Consensus 2 ~~~~~~~~g~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~-~g~gt~al 80 (360)
T 1w23_A 2 KQVFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFL-QGGASLQF 80 (360)
T ss_dssp CCCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEE-SSHHHHHH
T ss_pred CceEeecCCCcCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEE-CCcchHHH
Confidence 46899999999999999999999887654445555555677788888999999999999999743377776 455 9999
Q ss_pred HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhCCceEEecCCCCcCCCCCCccccc---cCCCccEEEEeecCCCcccc
Q 043610 148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALE---QNPDAKYLHICANETIHGVE 224 (430)
Q Consensus 148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~---i~~~~~lv~i~~~~t~tG~~ 224 (430)
.+++.+++.+|++...+..+.+++.+...++..|+++.++..+ +.+ .+|+++++ +++++++|+++|++|+||.+
T Consensus 81 ~~~~~~l~~~~~~g~~vi~~~~~~~~~~~~~~~g~~~~v~~~~--~~~-~~d~~~l~~~~i~~~~k~v~~~~~~nptG~~ 157 (360)
T 1w23_A 81 TMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTK--ANS-YQSIPDFSEFQLNENDAYLHITSNNTIYGTQ 157 (360)
T ss_dssp HHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECG--GGT-SCSCCCGGGCCCCTTEEEEEEESEETTTTEE
T ss_pred HHHHHHhcCCCCcccEEEecchhHHHHHHHHHhCCeEEeeccc--ccC-cCCccchHhhccCCCCCEEEEeCCCCCccee
Confidence 9999999877666554555677776555566667555566542 133 25667764 57889999999999999999
Q ss_pred CCCCccccCCCcEEEEeccCcCCCCccccccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCCC
Q 043610 225 FKEYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSL 304 (430)
Q Consensus 225 ~pei~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~ 304 (430)
+|+|.+ ++|+++++|++|+.|..++++.++|++++|+||++||+|+|++++++++++.+.+..++++++....+.+..
T Consensus 158 ~~~i~~--~~~~~li~D~a~~~~~~~~~~~~~di~~~s~sK~~~~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (360)
T 1w23_A 158 YQNFPE--INHAPLIADMSSDILSRPLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSL 235 (360)
T ss_dssp CSSCCC--CCSSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTSCTTCEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTC
T ss_pred cccccc--cCCceEEEechhhcCCCCcCcccCCEEEEEcccccCCCCcEEEEEcHHHHhhcccCCcchhhhhhhhhccCC
Confidence 986555 799999999999999998888888999999999999889999999999988766544544443322223455
Q ss_pred CCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCc-eecCCCCCCCccceEEEEcCCCchhH-HHH
Q 043610 305 YNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGF-YKCPVEKSVRSFMNVPFTLEKSDLEA-EFV 382 (430)
Q Consensus 305 ~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~-~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~ 382 (430)
++|++...++++..+++++.+.++++++.++++++++++++.|++..|+ ... ..+..+++.++.|.+++ ..+. ++.
T Consensus 236 ~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~ 313 (360)
T 1w23_A 236 YNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGH-AEKGSRSLMNVTFNLRN-EELNQQFL 313 (360)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEES-SCGGGBCSSEEEEECSS-HHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCccccc-CCchhccCcEEEEEcCC-CccHHHHH
Confidence 6899999999999999987654468999999999999999999974334 432 12223455578888874 2223 688
Q ss_pred HHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 383 KEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 383 ~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
++|.++||.+.+|+...+++|||++.+++++|+++++++|++++++
T Consensus 314 ~~l~~~gi~~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 314 AKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp HHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCeeeecCCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 8899999998877655678999999999999999999999998764
No 6
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=5.6e-39 Score=316.45 Aligned_cols=342 Identities=22% Similarity=0.279 Sum_probs=278.0
Q ss_pred CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610 69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA 148 (430)
Q Consensus 69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~ 148 (430)
++.++|+|||.++|+.|++++.+.+.+. .++.+|+++.+.+.++++++.+++++|.++.++++++ +|+|++++
T Consensus 3 ~~~~~~~p~p~~~~~~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~-~g~t~al~ 75 (362)
T 3ffr_A 3 NNKIYFTPGPSELYPTVRQHMITALDEK------IGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFL-ASATEIWE 75 (362)
T ss_dssp CCCEEECSSSCCCCTTHHHHHHHHHHTT------TTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEE-SCHHHHHH
T ss_pred CcceeccCCCcCCCHHHHHHHHHHhcCC------ccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEe-CCchHHHH
Confidence 4689999999999999999988877531 1124567889999999999999999999654366664 88999999
Q ss_pred HHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCC-
Q 043610 149 AVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFK- 226 (430)
Q Consensus 149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p- 226 (430)
.++.++.++ +++++..++|+..+...++..| +++.++... +..+|++++++++++++|++++++|+||.+.|
T Consensus 76 ~~~~~l~~~--~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~~~~~~v~~~~~~nptG~~~~l 149 (362)
T 3ffr_A 76 RIIQNCVEK--KSFHCVNGSFSKRFYEFAGELGREAYKEEAAF----GKGFYPADITVPADAEIICLTHNETSSGVSMPV 149 (362)
T ss_dssp HHHHHHCSS--EEEEEECSHHHHHHHHHHHHTTCEEEEEECCT----TCCCCGGGCCCCTTCCEEEEESEETTTTEECCH
T ss_pred HHHHhccCC--cEEEEcCcHHHHHHHHHHHHhCCCeEEEecCC----CCCCCHHHHhccCCccEEEEEcCCCCcceeCCH
Confidence 999999876 7777888899877777777788 888887642 23578888876788999999999999999999
Q ss_pred -CCccc-cCC-CcEEEEeccCcCCCCccccccccEEEeCCCcccc-CCccEEEEEcHHHHhccCCC------CCcccccc
Q 043610 227 -EYPSA-KNS-TGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDK------TPLMLDYK 296 (430)
Q Consensus 227 -ei~~~-~~~-g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~------~p~~~~~~ 296 (430)
+|.++ +++ |+++++|++|++|..++++.+.|++++|+|||++ |+|+|++++++++++.+.+. .++++++.
T Consensus 150 ~~i~~la~~~p~~~li~D~a~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~ 229 (362)
T 3ffr_A 150 EDINTFRDKNKDALIFVDAVSSLPYPKFDWTKIDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTIP 229 (362)
T ss_dssp HHHTTSGGGSTTSEEEEECTTTTTSSCCCTTSCSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHTTCCCCSTTSHH
T ss_pred HHHHHHHHhCCCCEEEEecccccCCcccChhHCcEEEEecccccCCCCceEEEEECHHHHHHhhhccccCCCCcccccHH
Confidence 78886 688 9999999999999999888888999999999997 99999999999987764321 23333332
Q ss_pred ch---hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC
Q 043610 297 IH---DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE 373 (430)
Q Consensus 297 ~~---~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~ 373 (430)
.. .+.+.+++|++...++++..+++++.+. |++++.++++++++++++.|++.+|+++.+..+..++..++.|.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~ 308 (362)
T 3ffr_A 230 SMLEKARVNQTPETPNAMNIFLLGKVTGDMLQI-SADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTT 308 (362)
T ss_dssp HHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEES
T ss_pred HHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecC
Confidence 21 2334557899999999999999987754 6999999999999999999998558988753444456678888887
Q ss_pred CCchhHHHHHHHHHcCCeecCCCCC--CCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610 374 KSDLEAEFVKEAAKEKMVQLKGHRS--VGGMRASIYNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 374 ~~~~~~~~~~~L~~~Gi~~~~g~~~--~g~iRis~~~~~t~edv~~ll~~L~~~~ 426 (430)
+ ...++.+.|.++||.+.+|... .+++|||++.+++++|+++++++|++++
T Consensus 309 ~--~~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 309 M--LPGEINKILEPFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp S--CHHHHHHHHGGGTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred C--CHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 5 2347999999899998877543 4579999999999999999999999874
No 7
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=100.00 E-value=4.9e-37 Score=304.79 Aligned_cols=342 Identities=18% Similarity=0.175 Sum_probs=273.7
Q ss_pred CCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610 67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ 146 (430)
Q Consensus 67 ~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a 146 (430)
.-...+||+|||.++|+.|++++.+.+ ..|+++.+.+.++++++.+++++|++++++++++++|+|++
T Consensus 16 ~~~~~~~~~pgp~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~a 83 (376)
T 3f0h_A 16 YFQGMLNFTVGPVMSSEEVRAIGAEQV------------PYFRTTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGS 83 (376)
T ss_dssp TTSSCEECSSSSCCCCHHHHHHHTSCC------------CCCSSHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHH
T ss_pred cccCceeecCCCCCCcHHHHHHhcCCC------------CCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHH
Confidence 345689999999999999999987754 23566788889999999999999998655788878999999
Q ss_pred HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccc
Q 043610 147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGV 223 (430)
Q Consensus 147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~ 223 (430)
++.++.+++++||+|++..+++++..+...++..| ++..++... +..+|+++++ +++++++|++++++|+||.
T Consensus 84 l~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~ 159 (376)
T 3f0h_A 84 MEAVVMNCFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLEH----GKKLTKEKLYEYDNQNFTGLLVNVDETSTAV 159 (376)
T ss_dssp HHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECCT----TCCCCHHHHHTTTTSCCCEEEEESEETTTTE
T ss_pred HHHHHHhccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCC----CCCCCHHHHHHhhccCceEEEEecccCCcce
Confidence 99999999999999999988899877766677778 888887742 2357888887 6789999999999999999
Q ss_pred cCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCcccc-CCccEEEEEcHHHHhccCCC--CCccccc
Q 043610 224 EFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDK--TPLMLDY 295 (430)
Q Consensus 224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~--~p~~~~~ 295 (430)
+.| +|.++ +++|+++++|++|++|..+++++++ |++++|+||++| ++|+|++++++++++.+.+. ..+++++
T Consensus 160 ~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~ 239 (376)
T 3f0h_A 160 LYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYFDL 239 (376)
T ss_dssp ECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTTCH
T ss_pred ecCHHHHHHHHHHcCCEEEEEcCccccCccccccccCccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceeecH
Confidence 999 78886 6899999999999999998888764 799999999997 99999999999988775431 2223333
Q ss_pred cchh---hcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEc
Q 043610 296 KIHD---ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTL 372 (430)
Q Consensus 296 ~~~~---~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~ 372 (430)
.... ..+.+.+|++...++++.++++++.+.++++.+.++..++++++++.|.+ .|+++.+ ..++..++.+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~---~~~~~~~~~~~~ 315 (376)
T 3f0h_A 240 KDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKD-LPFELVS---ESPANGVTSVHP 315 (376)
T ss_dssp HHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT-SSEEECC---SSBBTTEEEEEE
T ss_pred HHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-cCCccCc---cccCceEEEEeC
Confidence 2221 12344568888888999999998875446899999999999999999986 6777653 123445555554
Q ss_pred CCCchhHHHHHHHHHc-CCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 373 EKSDLEAEFVKEAAKE-KMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 373 ~~~~~~~~~~~~L~~~-Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
++ ....++.+.|.++ ||.+.+|.. ..+.+|||++.+++++|+++++++|++++++.
T Consensus 316 ~~-~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~~ 374 (376)
T 3f0h_A 316 TT-ANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKRN 374 (376)
T ss_dssp SS-SCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHTT
T ss_pred CC-CCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 32 1233799999887 999877642 24579999999999999999999999988753
No 8
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=100.00 E-value=1e-35 Score=298.62 Aligned_cols=342 Identities=22% Similarity=0.302 Sum_probs=263.5
Q ss_pred CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610 68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF 147 (430)
Q Consensus 68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~ 147 (430)
.+.+|+|++||.++|+.|++++.++. .+.....++++++.+.++++++.+++++|++++++|+++++|+|+++
T Consensus 38 ~~~~~~~~~~~~~~~~~v~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al 110 (398)
T 2fyf_A 38 KPRDGRFGSGPSKVRLEQLQTLTTTA-------AALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFW 110 (398)
T ss_dssp SCSSCBCCSSSCCCCHHHHHGGGTTT-------TTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHH
T ss_pred ccCCccccCCCCCCCHHHHHHHhhcC-------CCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHH
Confidence 45689999999999999999987631 01111236678888889999999999999974337877458999999
Q ss_pred HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHh--C-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCcccc
Q 043610 148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF--C-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVE 224 (430)
Q Consensus 148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~--g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~ 224 (430)
+.++.+++++| ++++..+.|+..+...+... | +++.++.. ++..++. ++++++++|++++++|+||.+
T Consensus 111 ~~~~~~l~~~g--v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~----~g~~~~~---~i~~~~~~v~~~~~~nptG~~ 181 (398)
T 2fyf_A 111 DAAAFGLIDKR--SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD----PGSAPEP---QTDPSVDVIAWAHNETSTGVA 181 (398)
T ss_dssp HHHHHHTCSSC--EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC----TTCCCCC---CCCTTCSEEEEESEETTTTEE
T ss_pred HHHHHHhcCCC--eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC----CCCCCCc---cccCCCCEEEEeCcCCCccee
Confidence 99999998876 44456777876665556666 7 77777764 2333322 256889999999999999999
Q ss_pred CC--CCccccCCCcEEEEeccCcCCCCccccccccEEEeCCCccccCC-ccEEEEEcHHHHhccCC------CCCccccc
Q 043610 225 FK--EYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPS-GVTIVIVRKDLLGNAQD------KTPLMLDY 295 (430)
Q Consensus 225 ~p--ei~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~gp~-G~g~l~v~~~~~~~~~~------~~p~~~~~ 295 (430)
+| +|.++ +|+++++|++|++|..++++++.|++++|+||++|++ |+|++++++++++.+.+ ..+.++++
T Consensus 182 ~~~~~i~~~--~~~~vivD~a~~~~~~~~~~~~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~ 259 (398)
T 2fyf_A 182 VAVRRPEGS--DDALVVIDATSGAGGLPVDIAETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSL 259 (398)
T ss_dssp CCCCCCTTC--C-CEEEEECTTTTTTSCCCGGGCSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHHHHTTCCCCGGGCH
T ss_pred cchHHhhhh--cCCeEEEEeccccCCcccCcccCcEEEEecCcccCCCCceEEEEECHHHHHHhhcccccCCCCCcEEeh
Confidence 99 78777 8999999999999999988877899999999999865 69999999998876521 12334443
Q ss_pred cchhh---cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEc
Q 043610 296 KIHDE---NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTL 372 (430)
Q Consensus 296 ~~~~~---~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~ 372 (430)
....+ .+..++|++...++++..+|+.+.+.++++++.++++++++++++.|++..|+++....+..+++.++.|.+
T Consensus 260 ~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~ 339 (398)
T 2fyf_A 260 PIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDF 339 (398)
T ss_dssp HHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEE
T ss_pred HHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEEC
Confidence 22111 235568999999999999999877554499999999999999999999755888763123235655788888
Q ss_pred CCCchhH-HHHHHHHHcCCeecCCCCC--CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 373 EKSDLEA-EFVKEAAKEKMVQLKGHRS--VGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 373 ~~~~~~~-~~~~~L~~~Gi~~~~g~~~--~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
++ +.+. ++.+.|.++||.+.+|+.. .+++|||++.+++++|+++++++|++++++
T Consensus 340 ~~-~~~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 340 VD-DVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp CT-TSCHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CC-CCCHHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 64 3333 7999999999998876543 357999999999999999999999998764
No 9
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=2.1e-36 Score=303.65 Aligned_cols=344 Identities=13% Similarity=0.130 Sum_probs=271.9
Q ss_pred cCCCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610 65 SGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT 144 (430)
Q Consensus 65 ~~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT 144 (430)
....+..++|+|||.++++.|++++.+.+ .+++++.+.+.++++++.+++++|.+++ +.+++++|++
T Consensus 8 ~~~~~~~~~~~pgp~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~~~~~la~~~~~~~~-~~v~~~~sgt 74 (411)
T 3nnk_A 8 QLNPPSRLLMGPGPINADPRVLRAMSSQL------------IGQYDPAMTHYMNEVMALYRGVFRTENR-WTMLVDGTSR 74 (411)
T ss_dssp SCCCCCCEEESSSCCCCCHHHHHHHTSCC------------CCTTCHHHHHHHHHHHHHHHHHHTCCCS-EEEEEESCHH
T ss_pred ccCCccceeecCCCCCCCHHHHHHhhccc------------cccccHHHHHHHHHHHHHHHHHhCCCCC-cEEEECCCcH
Confidence 34456789999999999999999987643 3456778888999999999999999876 5455568999
Q ss_pred HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCC
Q 043610 145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETI 220 (430)
Q Consensus 145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~ 220 (430)
++++.++.+++++||+|++..+++++..+...++..| +++.++... +..+|+++++ +++ ++++|++++++|+
T Consensus 75 ~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~i~~~~~~~v~~~~~~np 150 (411)
T 3nnk_A 75 AGIEAILVSAIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPW----GEVFTPDQVEDAVKRIRPRLLLTVQGDTS 150 (411)
T ss_dssp HHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCT----TCCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred HHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEecCC----CCCCCHHHHHHHHhhCCCeEEEEeCCCCC
Confidence 9999999999999999999998888865666677778 888887742 2357888887 654 8999999999999
Q ss_pred ccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCCC-----
Q 043610 221 HGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKT----- 289 (430)
Q Consensus 221 tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~----- 289 (430)
||.+.| +|.++ +++|+++++|++|++|..++++..+ |++++|+|||+ ||.|+|++++++++++.+.+..
T Consensus 151 tG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~ 230 (411)
T 3nnk_A 151 TTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEG 230 (411)
T ss_dssp TTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGG
T ss_pred cceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccCCCCceEEEEECHHHHHHHhhccccccc
Confidence 999999 78886 6899999999999999998888765 79999999996 7999999999999887654321
Q ss_pred ---------------Cccccccch----hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc
Q 043610 290 ---------------PLMLDYKIH----DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS 350 (430)
Q Consensus 290 ---------------p~~~~~~~~----~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~ 350 (430)
..++++... ...+...+|++...+.++..+++.+.+ .|++++.+++.++++++++.|++
T Consensus 231 ~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-~g~~~~~~~~~~~~~~l~~~L~~- 308 (411)
T 3nnk_A 231 IRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQ-EGLDYGIARHKLHGDALVKGIQA- 308 (411)
T ss_dssp GCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHH-
T ss_pred ccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHH-
Confidence 122221110 122345679999999999999998764 47999999999999999999997
Q ss_pred CCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHc-CCeecCCCC--CCCeeEEee-cCCCCHHHHHHHHHHHHHHH
Q 043610 351 NGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKE-KMVQLKGHR--SVGGMRASI-YNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 351 ~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~~--~~g~iRis~-~~~~t~edv~~ll~~L~~~~ 426 (430)
.|+++.. ++..+...++.|.+++.....++.+.|.++ ||.+.+|.. ..+++||++ +..++++|+++++++|++++
T Consensus 309 ~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l 387 (411)
T 3nnk_A 309 MGLETFG-DLKHKMNNVLGVVIPQGINGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVL 387 (411)
T ss_dssp TTCCBCS-CGGGBCSSEEEEECCTTCCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred cCCEeCC-CcccccccEEEEECCCCCCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHH
Confidence 5887763 232344567788886422233788888765 999877643 245899998 54568999999999999988
Q ss_pred Hh
Q 043610 427 AK 428 (430)
Q Consensus 427 ~~ 428 (430)
++
T Consensus 388 ~~ 389 (411)
T 3nnk_A 388 NY 389 (411)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 10
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=6e-36 Score=293.86 Aligned_cols=331 Identities=20% Similarity=0.223 Sum_probs=262.7
Q ss_pred eeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHH
Q 043610 72 FNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVP 151 (430)
Q Consensus 72 ~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~ 151 (430)
|||+|||.++++.|++++.+.+. .++++.+.+.++++|+.+++++|++++ ++++ ++|+|++++.++
T Consensus 3 ~l~~~~p~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~l~~~la~~~g~~~~-~i~~-~~g~t~a~~~~~ 68 (352)
T 1iug_A 3 WLLTPGPVRLHPKALEALARPQL------------HHRTEAAREVFLKARGLLREAFRTEGE-VLIL-TGSGTLAMEALV 68 (352)
T ss_dssp EECSSSSCCCCHHHHHHHHSCCC------------CTTSHHHHHHHHHHHHHHHHHHTCSSE-EEEE-ESCHHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHhccCCC------------CccCHHHHHHHHHHHHHHHHHhCCCCc-eEEE-cCchHHHHHHHH
Confidence 89999999999999999987652 245567777889999999999999864 6666 588999999999
Q ss_pred hhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCC--CC
Q 043610 152 LNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFK--EY 228 (430)
Q Consensus 152 ~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p--ei 228 (430)
.+++++||+|++..+++++..+...++..| +++.++... .+ .+|+++++- +++++|++++++|+||.+.| +|
T Consensus 69 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~-~~~~~v~~~~~~nptG~~~~l~~i 143 (352)
T 1iug_A 69 KNLFAPGERVLVPVYGKFSERFYEIALEAGLVVERLDYPY---GD-TPRPEDVAK-EGYAGLLLVHSETSTGALADLPAL 143 (352)
T ss_dssp HHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCT---TC-CCCTTTSCC-SSCSEEEEESEETTTTEECCHHHH
T ss_pred HhccCCCCeEEEEeCCchhHHHHHHHHHcCCceEEEeCCC---CC-CCCHHHHhc-cCCcEEEEEEecCCcceecCHHHH
Confidence 999899999999998888876555566678 888887743 22 467777754 78899999999999999999 78
Q ss_pred ccc-cCC--CcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCCCCccccccc---hh
Q 043610 229 PSA-KNS--TGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPLMLDYKI---HD 299 (430)
Q Consensus 229 ~~~-~~~--g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~---~~ 299 (430)
.++ +++ |+++++|++|++|..++++.++ |++++|+|||+ ||.|+|+++++++.++.+.+ ..+++++.. ..
T Consensus 144 ~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 222 (352)
T 1iug_A 144 ARAFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKP-RGYYLDLARELKAQ 222 (352)
T ss_dssp HHHHHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCC-CSSTTCHHHHHHHH
T ss_pred HHHHHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccccCCCceeEEEECHHHHHHhhC-CCceeeHHHHHhhc
Confidence 776 577 9999999999999988887654 79999999977 68899999999998876544 223333321 11
Q ss_pred hcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhH
Q 043610 300 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEA 379 (430)
Q Consensus 300 ~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~ 379 (430)
......+|++...+.++..+++.+.+ . ++++.++++++++++++.|++ .|+++.. +. +...++.|.+++.....
T Consensus 223 ~~~~~~~~~~~~~~~a~~~al~~~~~-~-~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~~-~~~~~~~~~~~~~~~~~ 296 (352)
T 1iug_A 223 KEGESAWTPAINLVLAVAAVLEEVLP-R-LEEHLALKAWQNALLYGVGEE-GGLRPVP--KR-FSPAVAAFYLPEGVPYA 296 (352)
T ss_dssp TTTCCSSCCCHHHHHHHHHHHHHHGG-G-HHHHHHHHHHHHHHHHHHHHH-TTCEESC--SS-BCTTCEEEECCTTCCHH
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHH-CCCcccc--cc-cCCeEEEEEcCCCCCHH
Confidence 22345678999999999999997653 3 889999999999999999997 4887753 21 34456778887421233
Q ss_pred HHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 380 EFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 380 ~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
++.++|.++||.+.+|.. ..+++||+++.+++++|+++++++|++++++
T Consensus 297 ~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 347 (352)
T 1iug_A 297 RVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEE 347 (352)
T ss_dssp HHHHHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHH
Confidence 799999999999877653 2457999999999999999999999998764
No 11
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=3.9e-36 Score=298.46 Aligned_cols=337 Identities=16% Similarity=0.208 Sum_probs=265.7
Q ss_pred ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEeCcHHHHHHH
Q 043610 71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE-YSVLFLQGGATTQFAA 149 (430)
Q Consensus 71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~-~~vv~~~~gaT~a~~~ 149 (430)
.++|++||.++++.|++++.+.+. ++++..+.+.++++++.+++++|++++ +++++ ++|+|++++
T Consensus 3 ~~~~~~gp~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~-~~g~t~al~- 68 (384)
T 3zrp_A 3 KLLLHVGPTTIKEDVLVAGLENNV------------GFTSKEFVEALAYSLKGLRYVMGASKNYQPLII-PGGGTSAME- 68 (384)
T ss_dssp ---CCSSCSCCCHHHHHHTTCCSC------------CTTSHHHHHHHHHHHHHHHHHHTCCTTSEEEEE-ESCHHHHHH-
T ss_pred ceeccCCCCCCCHHHHHHhhcccc------------ccccHHHHHHHHHHHHHHHHHhCCCCCCcEEEE-cCCcHHHHH-
Confidence 478999999999999999877542 345667788899999999999999862 26666 588999999
Q ss_pred HHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCccccC
Q 043610 150 VPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIHGVEF 225 (430)
Q Consensus 150 ~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~tG~~~ 225 (430)
++.+++++||+|++..+++++..+...++..| +++.++... .+ .+|+++++ +++ ++++|++++++|+||.+.
T Consensus 69 ~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~ 144 (384)
T 3zrp_A 69 SVTSLLKPNDKILVVSNGVFGDRWEQIFKRYPVNVKVLRPSP---GD-YVKPGEVEEEVRKSEYKLVALTHVETSTGVRE 144 (384)
T ss_dssp HGGGGCCTTCEEEEECSSHHHHHHHHHHTTSSCEEEEECCST---TC-CCCHHHHHHHHHHSCEEEEEEESEETTTTEEC
T ss_pred HHHhhcCCCCEEEEecCCcchHHHHHHHHHcCCcEEEecCCC---CC-CCCHHHHHHHHHhCCCcEEEEeCCCCCCceEC
Confidence 89999999999999888888876666666678 777777643 22 47888887 555 799999999999999999
Q ss_pred C--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhcc-CCC--CCcccccc
Q 043610 226 K--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNA-QDK--TPLMLDYK 296 (430)
Q Consensus 226 p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~-~~~--~p~~~~~~ 296 (430)
| +|.++ +++|+++++|++|++|..++++.++ |++++|+||++ |+.|+|++++++++++.+ .+. .+++++..
T Consensus 145 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (384)
T 3zrp_A 145 PVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDLR 224 (384)
T ss_dssp CHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCHH
T ss_pred cHHHHHHHHHhcCCEEEEECcccccCccccccccCCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCcccccHH
Confidence 9 78886 7899999999999999998888754 79999999999 599999999999998775 321 22333322
Q ss_pred chh---h-----cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceE
Q 043610 297 IHD---E-----NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV 368 (430)
Q Consensus 297 ~~~---~-----~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv 368 (430)
... . ....+||++...+.++..+++.+.+ .+++.+.++++++++++++.|++. |+++....+..+...++
T Consensus 225 ~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 302 (384)
T 3zrp_A 225 NWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEK-EGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPESYSNTVT 302 (384)
T ss_dssp HHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGGBCSSEE
T ss_pred HHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccccCccEE
Confidence 111 1 2233359999999999999998764 479999999999999999999974 88776422233455667
Q ss_pred EEEcCCCchhHHHHHHHHHcCCeecCCC-CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 369 PFTLEKSDLEAEFVKEAAKEKMVQLKGH-RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 369 ~f~~~~~~~~~~~~~~L~~~Gi~~~~g~-~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
.|.+++ ....++.+.|.++||.+.+|. ...+++||+++.+++++|+++++++|++++++
T Consensus 303 ~~~~~~-~~~~~~~~~l~~~gi~v~~g~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~ 362 (384)
T 3zrp_A 303 GVILKV-ADPQKVLAGTVNEGVEFAPGVHPAFKYFRIGHMGWVTPNDAIIAISVIERTLRK 362 (384)
T ss_dssp EEECSS-SCHHHHHHHHHTTTCCCEECCCTTCCEEEEECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEECCC-CCHHHHHHHHHHCCEEEecCCCCCcCEEEEeccccCCHHHHHHHHHHHHHHHHH
Confidence 788875 223379999999999987765 33368999999999999999999999998875
No 12
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=6.2e-36 Score=300.68 Aligned_cols=342 Identities=15% Similarity=0.136 Sum_probs=271.5
Q ss_pred CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610 68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF 147 (430)
Q Consensus 68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~ 147 (430)
.++.++|+++|.++++.+++++.+.. .+++++.+.+.++++++.+++++|.+++ +++++++|+|+++
T Consensus 9 ~~~~~~~~p~p~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~l~~~la~~~g~~~~-~~~~~~~s~t~al 75 (416)
T 3isl_A 9 TPLRTIMTPGPVEVDPRVLRVMSTPV------------VGQFDPAFTGIMNETMEMLRELFQTKNR-WAYPIDGTSRAGI 75 (416)
T ss_dssp CCCCEECSSSSCCCCHHHHHHTTSCC------------CCTTSHHHHHHHHHHHHHHHHHTTCCCS-EEEEEESCHHHHH
T ss_pred cccceeecCCCcCcCHHHHHHhcccC------------CCCccHHHHHHHHHHHHHHHHHhCCCCC-cEEEecCcHHHHH
Confidence 45789999999999999999876532 2345567788899999999999999875 6665678999999
Q ss_pred HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEeecCCCccc
Q 043610 148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHICANETIHGV 223 (430)
Q Consensus 148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~~~~t~tG~ 223 (430)
..++.+++++||+|++..+++++..+...++..| +++.++... .+ .+|+++++ ++ +++++|++++++|+||.
T Consensus 76 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~i~~~~~~~v~~~~~~nptG~ 151 (416)
T 3isl_A 76 EAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEW---GT-VFDPEDIIREIKKVKPKIVAMVHGETSTGR 151 (416)
T ss_dssp HHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT---TC-CCCHHHHHHHHHHHCCSEEEEESEETTTTE
T ss_pred HHHHHHhcCCCCEEEEecCCcccHHHHHHHHhcCCeeEEEecCC---CC-CCCHHHHHHHHhhCCCcEEEEEccCCCCce
Confidence 9999999999999999999988866666677778 888888753 23 57888887 65 68999999999999999
Q ss_pred cCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCC---------
Q 043610 224 EFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDK--------- 288 (430)
Q Consensus 224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~--------- 288 (430)
+.| +|.++ +++|+++++|++|++|..++++.++ |++++|+|||+ ||.|+|++++++++++.+.+.
T Consensus 152 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~ 231 (416)
T 3isl_A 152 IHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCLSVPSGMAPITYNERVADVIAARKKVERGIAT 231 (416)
T ss_dssp ECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCCCSSEEEEEECHHHHHHHHTC---------
T ss_pred ecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcCCCEEEecCccccCCCCCeEEEEECHHHHHHhhccccccccccc
Confidence 999 78876 6899999999999999998888765 79999999996 799999999999988775431
Q ss_pred -------------CCccccccch----hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC
Q 043610 289 -------------TPLMLDYKIH----DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN 351 (430)
Q Consensus 289 -------------~p~~~~~~~~----~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~ 351 (430)
...+++.... .......+|++...++++..+++.+.+ .|++++.+++.++++++++.|.+ .
T Consensus 232 ~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-~g~~~~~~~~~~~~~~l~~~L~~-~ 309 (416)
T 3isl_A 232 QADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLE-EGLETRFERHRHHEAALAAGIKA-M 309 (416)
T ss_dssp ---------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred cccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHH-c
Confidence 1122221111 122334679999999999999998764 47999999999999999999997 6
Q ss_pred CceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHc-CCeecCCCC--CCCeeEEeecCCCCHHH-HHHHHHHHHHHHH
Q 043610 352 GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKE-KMVQLKGHR--SVGGMRASIYNAMPLAG-VEKLVAFMKDFQA 427 (430)
Q Consensus 352 G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~~--~~g~iRis~~~~~t~ed-v~~ll~~L~~~~~ 427 (430)
|+++.. ....+...++.|.+++.....++.+.|.++ ||.+.+|.. ..+++||+++.+++++| +++++++|+++++
T Consensus 310 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~ 388 (416)
T 3isl_A 310 GLRLFG-DDSCKMPVVTCVEIPGGIDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLL 388 (416)
T ss_dssp TCCBCS-CGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred CCEecc-CccccCCcEEEEeCCCCCCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHH
Confidence 887764 222344567888886422233799999776 999887653 34589999988777766 9999999999887
Q ss_pred hh
Q 043610 428 KH 429 (430)
Q Consensus 428 ~~ 429 (430)
+.
T Consensus 389 ~~ 390 (416)
T 3isl_A 389 RH 390 (416)
T ss_dssp HT
T ss_pred Hc
Confidence 53
No 13
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=1.9e-35 Score=295.11 Aligned_cols=344 Identities=17% Similarity=0.194 Sum_probs=267.1
Q ss_pred cCCCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610 65 SGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT 144 (430)
Q Consensus 65 ~~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT 144 (430)
....++.|++++||.++|+.|++++.+.+. .++.+.....++++++.+++++|+++++++++ ++|+|
T Consensus 14 ~~~~~~~~~~~~g~~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~-~~g~t 80 (393)
T 2huf_A 14 PLVTPNKLLMGPGPSNAPQRVLDAMSRPIL------------GHLHPETLKIMDDIKEGVRYLFQTNNIATFCL-SASGH 80 (393)
T ss_dssp CCCCCCCEECSSSCCCCCHHHHHHTTSCCC------------CTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEE-SSCHH
T ss_pred ccCCCCeEEecCCCCCCCHHHHHHHHhhhc------------cCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEE-cCcHH
Confidence 345567899999999999999999877542 12345566788999999999999976435555 68999
Q ss_pred HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCC
Q 043610 145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETI 220 (430)
Q Consensus 145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~ 220 (430)
++++.++.+++++||+|++..+++++..+...++..| +++.++..+ .+ .+|+++++ +++ ++++|++++++|+
T Consensus 81 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~i~~~~~~~v~~~~~~np 156 (393)
T 2huf_A 81 GGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKV---GQ-SLSLDEIRDALLIHKPSVLFLTQGDSS 156 (393)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT---TC-CCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred HHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC---CC-CCCHHHHHHHHhccCCcEEEEEccCCC
Confidence 9999999999899999999998888866655666678 887887643 22 47888887 666 8999999999999
Q ss_pred ccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCC----CC
Q 043610 221 HGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDK----TP 290 (430)
Q Consensus 221 tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~----~p 290 (430)
||.+.| +|.++ +++|+++++|++|++|..++++.++ |++++|+|||+ ||+|+|++++++++++.+.+. .+
T Consensus 157 tG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~ 236 (393)
T 2huf_A 157 TGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKV 236 (393)
T ss_dssp TTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSC
T ss_pred ccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhcCccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCce
Confidence 999999 67775 6899999999999999988877654 79999999997 699999999999988875432 24
Q ss_pred ccccc-------cchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCC
Q 043610 291 LMLDY-------KIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVR 363 (430)
Q Consensus 291 ~~~~~-------~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~r 363 (430)
++++. ......+...+|++...+.++..+++.+.+ .+++++.++++++++++++.|.+ .|+++.. .+..+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~~~~ 313 (393)
T 2huf_A 237 YYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACE-EGLPALIARHEDCAKRLYRGLQD-AGFELYA-DPKDR 313 (393)
T ss_dssp GGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHH-TTCCBSS-CGGGB
T ss_pred EEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHH-cCCeecc-Ccccc
Confidence 44331 111112345579999999999999998764 37999999999999999999997 4887653 22224
Q ss_pred ccceEEEEcCCCchhHHHHHHHHH-cCCeecCCCC--CCCeeEEeecCC-CCHHHHHHHHHHHHHHHHh
Q 043610 364 SFMNVPFTLEKSDLEAEFVKEAAK-EKMVQLKGHR--SVGGMRASIYNA-MPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 364 s~~iv~f~~~~~~~~~~~~~~L~~-~Gi~~~~g~~--~~g~iRis~~~~-~t~edv~~ll~~L~~~~~~ 428 (430)
++.++.|.++......++.++|.+ +||.+.+|.. ..+++||+++.+ ++++|+++++++|++++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~ 382 (393)
T 2huf_A 314 LSTVTTIKVPQGVDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAA 382 (393)
T ss_dssp CTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHH
Confidence 555677888631123378888876 4999887643 246899999655 5799999999999998764
No 14
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=1.8e-35 Score=295.20 Aligned_cols=344 Identities=16% Similarity=0.174 Sum_probs=269.0
Q ss_pred cCCCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610 65 SGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT 144 (430)
Q Consensus 65 ~~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT 144 (430)
....+.+|++++||+++|+.|++++.+.+. .+++..+.+.++++|+.+++++|++++ ++++ ++|+|
T Consensus 4 p~~~~~~yl~~~~~~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~-t~g~t 69 (392)
T 2z9v_A 4 PEHADPVITLTAGPVNAYPEVLRGLGRTVL------------YDYDPAFQLLYEKVVDKAQKAMRLSNK-PVIL-HGEPV 69 (392)
T ss_dssp CTTSCCSEECSSSCCCCCHHHHHHTTSCCC------------CTTSHHHHHHHHHHHHHHHHHTTCSSC-CEEE-SSCTH
T ss_pred ccCCCcceeecCCCcCCCHHHHHHHhcccc------------ccccHHHHHHHHHHHHHHHHHhCCCCC-EEEE-eCCch
Confidence 345577999999999999999999887653 134566777889999999999999764 6666 58899
Q ss_pred HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c--CCCccEEEEeecCC
Q 043610 145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q--NPDAKYLHICANET 219 (430)
Q Consensus 145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i--~~~~~lv~i~~~~t 219 (430)
+++..++.+++++||+|++..+++++..+...++..| +++.++..+ .+ .+|+++++ + ++++++|++++++|
T Consensus 70 ~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~l~~~~~~~~v~~~~~~n 145 (392)
T 2z9v_A 70 LGLEAAAASLISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPY---NE-AIDPQAVADMLKAHPEITVVSVCHHDT 145 (392)
T ss_dssp HHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCT---TS-CCCHHHHHHHHHHCTTCCEEEEESEEG
T ss_pred HHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCC---CC-CCCHHHHHHHHhcCCCCcEEEEeccCC
Confidence 9999999998899999999988888776655666678 888888743 23 47888887 5 57899999999999
Q ss_pred CccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCCC--C-
Q 043610 220 IHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKT--P- 290 (430)
Q Consensus 220 ~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~--p- 290 (430)
+||.+.| +|.++ +++|+++++|++|++|..++++.++ |++++|+|||+ ||+|+|++++++++++.+.+.. +
T Consensus 146 ptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~~~~~g~~ 225 (392)
T 2z9v_A 146 PSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLGAPPGLTMMGVSERAWAKMKANPLAPR 225 (392)
T ss_dssp GGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTCCCSCCEEEEECHHHHHHHHTCTTSCC
T ss_pred CCceeccHHHHHHHHHHcCCeEEEEcccccCCcccccccccceEEEecCcccccCCCceeEEEECHHHHHHhhhccCCCC
Confidence 9999999 78886 6899999999999999988887665 79999999988 6899999999999887654311 1
Q ss_pred -ccccccch----hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCcc
Q 043610 291 -LMLDYKIH----DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF 365 (430)
Q Consensus 291 -~~~~~~~~----~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~ 365 (430)
+++++... .......+|++...++++..+++.+.+ .|++.+.++++++++++++.|++ .|+++....+..+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-~g~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~ 303 (392)
T 2z9v_A 226 ASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLN-EGPEAVWARHALTAKAMRAGVTA-MGLSVWAASDSIASP 303 (392)
T ss_dssp SSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHH-TTCCBSSSSGGGBCT
T ss_pred ceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHH-cCCeeccCCccccCC
Confidence 33332211 112334578999999999999998764 47999999999999999999997 487765312212344
Q ss_pred ceEEEEcCCCchhHHHHHHHHHc-CCeecCCCC--CCCeeEEeecC-CCCHHHHHHHHHHHHHHHHh
Q 043610 366 MNVPFTLEKSDLEAEFVKEAAKE-KMVQLKGHR--SVGGMRASIYN-AMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 366 ~iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~~--~~g~iRis~~~-~~t~edv~~ll~~L~~~~~~ 428 (430)
.++.|.+++.....++.++|.++ ||.+.+|.. ..+.+|||++. +++++|+++++++|++++++
T Consensus 304 ~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~ 370 (392)
T 2z9v_A 304 TTTAVRTPDGVDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNA 370 (392)
T ss_dssp TEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred ceEEEECCCCCCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHH
Confidence 56778886322233799999887 999877642 24689999755 88999999999999998764
No 15
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=100.00 E-value=5.2e-35 Score=291.21 Aligned_cols=342 Identities=15% Similarity=0.231 Sum_probs=270.0
Q ss_pred CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610 68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF 147 (430)
Q Consensus 68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~ 147 (430)
.+..++|++||.++++.|++++.+.+ ..++++.+.+..+++++.+++++|.++++++++ ++|+++++
T Consensus 21 ~~~~~~~~p~p~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~-~~gg~~al 87 (393)
T 3kgw_A 21 VPTRLLLGPGPSNLAPRVLAAGSLRM------------IGHMQKEMLQIMEEIKQGIQYVFQTRNPLTLVV-SGSGHCAM 87 (393)
T ss_dssp CCCCEECSSSCCCCCHHHHHHTTCCC------------CCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEE-SCCTTTHH
T ss_pred CccceeccCCCCCCCHHHHHHhcccc------------cCcccHHHHHHHHHHHHHHHHHhCCCCCcEEEE-eCCcHHHH
Confidence 45679999999999999999987643 234566777888999999999999986534555 68899999
Q ss_pred HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCccc
Q 043610 148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIHGV 223 (430)
Q Consensus 148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~tG~ 223 (430)
..++.+++++||+|++...++|+..+...++..| +++.++... .+ .+|+++++ +++ ++++|++++++|+||.
T Consensus 88 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~-~~d~~~l~~~i~~~~~~~v~~~~~~nptG~ 163 (393)
T 3kgw_A 88 ETALFNLLEPGDSFLTGTNGIWGMRAAEIADRIGARVHQMIKKP---GE-HYTLQEVEEGLAQHKPVLLFLVHGESSTGV 163 (393)
T ss_dssp HHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT---TC-CCCHHHHHHHHHHHCCSEEEEESEETTTTE
T ss_pred HHHHHhcCCCCCEEEEEeCCchhHHHHHHHHHcCCceEEEeCCC---CC-CCCHHHHHHHHhhCCCcEEEEeccCCcchh
Confidence 9999999999999999988888877667777788 887787743 22 57888887 666 8999999999999999
Q ss_pred cCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCC----CCccc
Q 043610 224 EFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDK----TPLML 293 (430)
Q Consensus 224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~----~p~~~ 293 (430)
+.| +|.++ +++|+++++|++|++|..+++++.+ |+++.++|||+ |+.|+|++++++++++.+.+. .++++
T Consensus 164 ~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 243 (393)
T 3kgw_A 164 VQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYT 243 (393)
T ss_dssp ECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTT
T ss_pred hccHHHHHHHHHHcCCEEEEECCccccCcccchhhcCCCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceee
Confidence 999 67776 6899999999999999988877655 79999999988 699999999999988775431 22333
Q ss_pred cccc-------hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccc
Q 043610 294 DYKI-------HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFM 366 (430)
Q Consensus 294 ~~~~-------~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~ 366 (430)
++.. ....+...+|++...++++..+++.+.+ .+++++.+++.++++++++.|++ .|+++...+...+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~ 321 (393)
T 3kgw_A 244 DITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAE-QGLENCWRRHREATAHLHKHLQE-MGLKFFVKDPEIRLPT 321 (393)
T ss_dssp CHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHH-TTCCBSSSSGGGBCSS
T ss_pred cHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHH-cCCeeccCChhhcCCe
Confidence 3211 0112345579999999999999997764 48999999999999999999997 4887763233445556
Q ss_pred eEEEEcCCCchhHHHHHHHHHc-CCeecCCCC--CCCeeEEeecCC-CCHHHHHHHHHHHHHHHHh
Q 043610 367 NVPFTLEKSDLEAEFVKEAAKE-KMVQLKGHR--SVGGMRASIYNA-MPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 367 iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~~--~~g~iRis~~~~-~t~edv~~ll~~L~~~~~~ 428 (430)
++.|.+++.....++.+.|.++ ||.+.+|.. ..+++||+++.+ ++++|+++++++|++++++
T Consensus 322 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~ 387 (393)
T 3kgw_A 322 ITTVTVPAGYNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQH 387 (393)
T ss_dssp EEEEECCTTBCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHh
Confidence 6678886422233799998877 999887653 245899998554 5999999999999998865
No 16
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=100.00 E-value=6.3e-35 Score=286.18 Aligned_cols=333 Identities=16% Similarity=0.181 Sum_probs=261.1
Q ss_pred ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEeCcHHHHHHH
Q 043610 71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP-QEYSVLFLQGGATTQFAA 149 (430)
Q Consensus 71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~-~~~~vv~~~~gaT~a~~~ 149 (430)
.++|+|||.++|+.|++++.+.+. .|+++.+.+..+++++.+++++|.+ +.+++++ ++|+|++++.
T Consensus 1 ~~~~~~gp~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~-t~g~t~a~~~ 67 (353)
T 2yrr_A 1 MLLLTPGPTPIPERVQKALLRPMR------------GHLDPEVLRVNRAIQERLAALFDPGEGALVAAL-AGSGSLGMEA 67 (353)
T ss_dssp CEECSSSSCCCCHHHHGGGGSCCC------------CTTCHHHHHHHHHHHHHHHHHHCCCTTCEEEEE-SSCHHHHHHH
T ss_pred CccCCCCCCCCCHHHHHHHhcccc------------cccCHHHHHHHHHHHHHHHHHhCCCCCCceEEE-cCCcHHHHHH
Confidence 478999999999999999877652 1456677788999999999999996 2225555 6899999999
Q ss_pred HHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCccccC
Q 043610 150 VPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIHGVEF 225 (430)
Q Consensus 150 ~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~tG~~~ 225 (430)
++.++.+ |+|++...++++..+...++..| +++.++..+ .+ .+|+++++ +++ ++++|++++++|+||.+.
T Consensus 68 ~~~~~~~--d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~ 141 (353)
T 2yrr_A 68 GLANLDR--GPVLVLVNGAFSQRVAEMAALHGLDPEVLDFPP---GE-PVDPEAVARALKRRRYRMVALVHGETSTGVLN 141 (353)
T ss_dssp HHHTCSC--CCEEEEECSHHHHHHHHHHHHTTCCEEEEECCT---TS-CCCHHHHHHHHHHSCCSEEEEESEETTTTEEC
T ss_pred HHHHhcC--CcEEEEcCCCchHHHHHHHHHcCCceEEEeCCC---CC-CCCHHHHHHHHHhCCCCEEEEEccCCCcceec
Confidence 9988876 88998888888765555667778 888888743 22 47888887 666 899999999999999999
Q ss_pred C--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCCCC-ccccccch
Q 043610 226 K--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTP-LMLDYKIH 298 (430)
Q Consensus 226 p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p-~~~~~~~~ 298 (430)
| +|.++ +++|+++++|++|++|..++++..+ |++++|+|||+ ||+|+|++++++++++.+.. .+ +++++...
T Consensus 142 ~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~-~~~~~~~~~~~ 220 (353)
T 2yrr_A 142 PAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTG-KRGWYLDLARV 220 (353)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCC-CSCSTTCHHHH
T ss_pred CHHHHHHHHHHcCCeEEEEcCcccccccccccccCceEEEecCcccccCCCceEEEEECHHHHHHhcc-CCCccccHHHH
Confidence 9 78776 6889999999999999888777655 79999999988 68899999999999877642 12 23322111
Q ss_pred ---hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC
Q 043610 299 ---DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS 375 (430)
Q Consensus 299 ---~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~ 375 (430)
.......+|++...+.++..+++.+.+ .|++++.++++++++++++.|++ .|+++.. +..+.+.++.|.+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~~~~~~~~~~~~~~~~ 296 (353)
T 2yrr_A 221 AEHWERGGYHHTTPVLLHYALLEALDLVLE-EGVAARERRAREVYAWVLEELKA-RGFRPYP--KASPLPTVLVVRPPEG 296 (353)
T ss_dssp HHHHTTCCCSSCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHH-TTCEESC--SSSBCTTEEEEECCTT
T ss_pred hhhhhcCCCCCCCCHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHH-CCCcccc--CccCCCeEEEEECCCC
Confidence 112344578999999999999998764 47999999999999999999997 4888764 2223456677888632
Q ss_pred chhHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHH-HHHHHHHHHHH
Q 043610 376 DLEAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVE-KLVAFMKDFQA 427 (430)
Q Consensus 376 ~~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~-~ll~~L~~~~~ 427 (430)
....++.++|.++||.+.+|.. ..+++|+|++.+++++|++ +++++|+++++
T Consensus 297 ~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 297 VDADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALA 351 (353)
T ss_dssp CCHHHHHHHHHHTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 1233799999999999877652 2457999998888999999 99999999875
No 17
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=1.3e-34 Score=289.41 Aligned_cols=343 Identities=17% Similarity=0.229 Sum_probs=263.9
Q ss_pred CCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610 67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ 146 (430)
Q Consensus 67 ~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a 146 (430)
..++.|++++||.++++.|++++.+.+. +++++.+...++++++.+++++|.++++++++ ++|+|++
T Consensus 15 ~~~~~~~~~~~p~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~-~~g~t~a 81 (396)
T 2ch1_A 15 IIPEKIMMGPGPSNCSKRVLTAMTNTVL------------SNFHAELFRTMDEVKDGLRYIFQTENRATMCV-SGSAHAG 81 (396)
T ss_dssp CCCCCBCCSSSSCCCCHHHHHHTTSCCC------------CTTCHHHHHHHHHHHHHHHHHHTCCCSCEEEE-SSCHHHH
T ss_pred CCCcceeecCCCCCCCHHHHHHhccccc------------cCCChhHHHHHHHHHHHHHHHhCCCCCcEEEE-CCcHHHH
Confidence 3456799999999999999999876541 23445556678899999999999986435655 5899999
Q ss_pred HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCcc
Q 043610 147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIHG 222 (430)
Q Consensus 147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~tG 222 (430)
+..++.+++++||+|++..++++++.+...++..| +++.++... +..+|+++++ +++ ++++|++++++|+||
T Consensus 82 l~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG 157 (396)
T 2ch1_A 82 MEAMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPP----DRPFSLETLARAIELHQPKCLFLTHGDSSSG 157 (396)
T ss_dssp HHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT----TSCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred HHHHHHHhcCCCCeEEEEcCCcccHHHHHHHHHcCCceEEecCCC----CCCCCHHHHHHHHHhCCCCEEEEECCCCCCc
Confidence 99999999999999999999988876555667778 887787642 2247888887 666 899999999999999
Q ss_pred ccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCC----CCcc
Q 043610 223 VEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDK----TPLM 292 (430)
Q Consensus 223 ~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~----~p~~ 292 (430)
.+.| +|.++ +++|+++++|++|++|..++++..+ |+++.|+||++ ++.|+|++++++++++.+... .+++
T Consensus 158 ~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (396)
T 2ch1_A 158 LLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFY 237 (396)
T ss_dssp EECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGG
T ss_pred eecCHHHHHHHHHHcCCEEEEEccccccCCccchhhcCcCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceE
Confidence 9999 67775 6889999999999999988888776 78899999998 589999999999988765321 2223
Q ss_pred ccccch-------hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCcc
Q 043610 293 LDYKIH-------DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF 365 (430)
Q Consensus 293 ~~~~~~-------~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~ 365 (430)
++.... .......+|++...++++.++|+.+.+ .+++.+.++++++++++++.|++. |+++++.....+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~ 315 (396)
T 2ch1_A 238 WDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAE-EGLENQIKRRIECAQILYEGLGKM-GLDIFVKDPRHRLP 315 (396)
T ss_dssp GCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHH-TCCBSSCSGGGBCT
T ss_pred echHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHC-CCeeccCCccccCC
Confidence 321110 011335578999999999999998653 479999999999999999999974 88776422113455
Q ss_pred ceEEEEcCCCchhHHHHHHHHHc-CCeecCCCC--CCCeeEEeecC-CCCHHHHHHHHHHHHHHHHh
Q 043610 366 MNVPFTLEKSDLEAEFVKEAAKE-KMVQLKGHR--SVGGMRASIYN-AMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 366 ~iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~~--~~g~iRis~~~-~~t~edv~~ll~~L~~~~~~ 428 (430)
.++.|.++......++.++|.++ ||.+.+|.. ..+++||+++. .++++|+++++++|++++++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~ 382 (396)
T 2ch1_A 316 TVTGIMIPKGVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKA 382 (396)
T ss_dssp TEEEEECCTTCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCCCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHH
Confidence 56778886321233788888765 999877642 24579999954 56899999999999998865
No 18
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.6e-34 Score=285.68 Aligned_cols=341 Identities=19% Similarity=0.243 Sum_probs=267.1
Q ss_pred CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610 69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA 148 (430)
Q Consensus 69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~ 148 (430)
+.+|+++++|.++++.|++++.+.+. +++++.+.+..+++++.+++++|.++.+++++ ++|+|+|+.
T Consensus 19 ~~~~l~~~~~~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~-~~g~t~a~~ 85 (386)
T 2dr1_A 19 PKYKLFTAGPVACFPEVLEIMKVQMF------------SHRSKEYRKVHMDTVERLREFLEVEKGEVLLV-PSSGTGIME 85 (386)
T ss_dssp CCSEECCSSSCCCCHHHHHHTTSCCC------------CTTSHHHHHHHHHHHHHHHHHHTCSSSEEEEE-SSCHHHHHH
T ss_pred ccceeecCCCcCCcHHHHHHHhcccc------------cccCHHHHHHHHHHHHHHHHHhCCCCCcEEEE-eCChHHHHH
Confidence 46899999999999999999876542 24556667888999999999999972224555 689999999
Q ss_pred HHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c--CCCccEEEEeecCCCccc
Q 043610 149 AVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q--NPDAKYLHICANETIHGV 223 (430)
Q Consensus 149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i--~~~~~lv~i~~~~t~tG~ 223 (430)
.++.+++++||+|++..+++++..+...++..| +++.++... +..+|+++|+ + ++++++|++++++|+||.
T Consensus 86 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~ 161 (386)
T 2dr1_A 86 ASIRNGVSKGGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEP----GKAVKPEDLDDALRKNPDVEAVTITYNETSTGV 161 (386)
T ss_dssp HHHHHHSCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT----TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTE
T ss_pred HHHHHhhcCCCeEEEEcCCchhHHHHHHHHHhCCceEEEecCC----CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcch
Confidence 999998899999999998887754556667778 777777643 2247888887 5 578999999999999999
Q ss_pred cCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCcccc-CCccEEEEEcHHHHhccCCC--CCccccc
Q 043610 224 EFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDK--TPLMLDY 295 (430)
Q Consensus 224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~--~p~~~~~ 295 (430)
+.| +|.++ +++|+++++|++|++|..++++.++ |++++|+||+++ |.|+|++++++++++.+.+. ..+++++
T Consensus 162 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~ 241 (386)
T 2dr1_A 162 LNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYFDI 241 (386)
T ss_dssp ECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTSTTCCCSSCEEEEECHHHHHHHTTCTTCCSTTCH
T ss_pred hCCHHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEEeccccccCCCceEEEEECHHHHHHHhcCCCCceEEeH
Confidence 999 78886 6899999999999999887777655 799999999996 66899999999988776431 2233333
Q ss_pred cch---hh-cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEE
Q 043610 296 KIH---DE-NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFT 371 (430)
Q Consensus 296 ~~~---~~-~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~ 371 (430)
... .. .....+|++...++++..+|+.+.+.+|++++.++++++++++++.|++ .|+++... ...+...++.|.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~-~~~~~~~~~~~~ 319 (386)
T 2dr1_A 242 PLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVRE-IGLDILAE-PGHESPTITAVL 319 (386)
T ss_dssp HHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH-TTCCBSSC-TTCBCSSEEEEE
T ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-cCCeeCcC-ccccCCceEEEE
Confidence 211 11 2344568999999999999998764337999999999999999999997 48876542 223344567788
Q ss_pred cCCCchhHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 372 LEKSDLEAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 372 ~~~~~~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
+++.....++.++|.++||.+.+|.. ..+.+|||++.+++++|+++++++|++++++
T Consensus 320 ~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 378 (386)
T 2dr1_A 320 TPPGIKGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINE 378 (386)
T ss_dssp CCTTCCHHHHHHHHHHTTEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 87422233799999888999877643 2458999999999999999999999998764
No 19
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=100.00 E-value=2.3e-34 Score=283.63 Aligned_cols=339 Identities=19% Similarity=0.265 Sum_probs=259.8
Q ss_pred CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHH-HHHHHHHHHHHHHhCCCCCc-EEEEEeCcHHHHH
Q 043610 70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFK-SIIEKAESDLRALLNIPQEY-SVLFLQGGATTQF 147 (430)
Q Consensus 70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~~~r~~la~l~g~~~~~-~vv~~~~gaT~a~ 147 (430)
++++|++||.+.++.|++++.+.+ .|++..+. ..++++|+.+++++|.+.+. ++++ ++|+|+|+
T Consensus 4 ~~~~~~~gp~~~~~~v~~a~~~~~-------------~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~-~~g~t~a~ 69 (366)
T 1m32_A 4 NYLLLTPGPLTTSRTVKEAMLFDS-------------CTWDDDYNIGVVEQIRQQLTALATASEGYTSVLL-QGSGSYAV 69 (366)
T ss_dssp -CEECSSSSCCCCHHHHHTTCCCC-------------CTTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEE-ESCHHHHH
T ss_pred ccccccCCCcCCCHHHHHHHhhhh-------------cCCCHHHHHHHHHHHHHHHHHHhCCCCcCcEEEE-ecChHHHH
Confidence 479999999999999999987632 24445555 67889999999999954322 4665 58999999
Q ss_pred HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC--CCccEEEEeecCCCcc
Q 043610 148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN--PDAKYLHICANETIHG 222 (430)
Q Consensus 148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~--~~~~lv~i~~~~t~tG 222 (430)
+.++.++.++||+|++..+.+|+..+...++..| +++.++... .+ .+|+++++ ++ +++++|++++++|+||
T Consensus 70 ~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~l~~~~~~~~v~~~~~~nptG 145 (366)
T 1m32_A 70 EAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE---VA-RPDVQAIDAILNADPTISHIAMVHSETTTG 145 (366)
T ss_dssp HHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCT---TS-CCCHHHHHHHHHHCTTCCEEEEESEETTTT
T ss_pred HHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCC---CC-CCCHHHHHHHHhcCCCeEEEEEecccCCcc
Confidence 9999999899999988887777654545566778 888887742 22 47888887 44 3689999999999999
Q ss_pred ccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCC-CCccccc
Q 043610 223 VEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDK-TPLMLDY 295 (430)
Q Consensus 223 ~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~-~p~~~~~ 295 (430)
.+.| +|.++ +++|+++++|++|++|..++++.++ |++++|+|||+ ||.|+|++++++++++.+.+. .+++++.
T Consensus 146 ~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~ 225 (366)
T 1m32_A 146 MLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDL 225 (366)
T ss_dssp EECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCH
T ss_pred eecCHHHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecCcccccCCCceEEEEECHHHHHhhcCCCCCccccH
Confidence 9999 78776 6889999999999999988887654 79999999998 699999999999998876542 2223221
Q ss_pred cch-----hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEE
Q 043610 296 KIH-----DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF 370 (430)
Q Consensus 296 ~~~-----~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f 370 (430)
... ...+...+|++...++++..+++.+.+.++++.+.++++++++++++.|++ .|+++.. ++..+++..+.|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-~~~~~~~~~~~~ 303 (366)
T 1m32_A 226 YAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRA-LGFNTLL-DDELHSPIITAF 303 (366)
T ss_dssp HHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-TTCCBSS-CGGGBCSSEEEE
T ss_pred HHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHH-CCCeecc-CchhcCceEEEE
Confidence 110 011233468999999999999998765422899999999999999999997 4877653 211245556778
Q ss_pred EcCC--CchhHHHHHHHHHcCCeecCCCC-CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 371 TLEK--SDLEAEFVKEAAKEKMVQLKGHR-SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 371 ~~~~--~~~~~~~~~~L~~~Gi~~~~g~~-~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
.+++ .....++.+.|.++||.+.+|.. ..+++|++++.+++++|+++++++|++++++
T Consensus 304 ~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 304 YSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp ECCCCTTCCHHHHHHHHHHTTEECEECCCSSSCEEEEECCSSCCHHHHHHHHHHHHHHCTT
T ss_pred EcCccCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 8763 12233799999999999877643 3468999999999999999999999998764
No 20
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=9.1e-34 Score=280.66 Aligned_cols=337 Identities=15% Similarity=0.124 Sum_probs=261.1
Q ss_pred ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHH
Q 043610 71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAV 150 (430)
Q Consensus 71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~ 150 (430)
+|++.++.+++|+.|++++.+.+.+..+.+.+ .+..+....+.++++++.+++++|++++ +++++ +|+|+++..+
T Consensus 2 iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~la~~~~~~~~-~i~~~-~g~~~a~~~~ 76 (382)
T 4hvk_A 2 AYFDYTSAKPVDERILEAMLPYMTESFGNPSS---VHSYGFKAREAVQEAREKVAKLVNGGGG-TVVFT-SGATEANNLA 76 (382)
T ss_dssp CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTC---SSHHHHHHHHHHHHHHHHHHHHTTCTTE-EEEEE-SSHHHHHHHH
T ss_pred EeecCCCcCCCCHHHHHHHHHHHHhhcCCCcc---cchHHHHHHHHHHHHHHHHHHHcCCCcC-eEEEE-CCchHHHHHH
Confidence 68889999999999999999988764433322 1222455678889999999999999864 67665 8899999999
Q ss_pred HhhcC----CCCCcEEEEeCChhHHHH-HHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcc
Q 043610 151 PLNLC----TPNDPVDYIVTGSWGDKA-FKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHG 222 (430)
Q Consensus 151 ~~sl~----~~gd~vl~~~~g~~~~~~-~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG 222 (430)
+.++. ++||+|++....+.+... ...+++.| +++.++..+ .+ .+|+++++ +++++++|++++++|+||
T Consensus 77 ~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~i~~~~~~v~~~~~~nptG 152 (382)
T 4hvk_A 77 IIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK---YG-EVDVSFIDQKLRDDTILVSVQHANNEIG 152 (382)
T ss_dssp HHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCT---TS-CBCHHHHHHHCCTTEEEEECCSBCTTTC
T ss_pred HHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCC---CC-CcCHHHHHHHhccCceEEEEECCCCCce
Confidence 99887 899999987777766432 23344567 777777643 23 57888887 788999999999999999
Q ss_pred ccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccc
Q 043610 223 VEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKI 297 (430)
Q Consensus 223 ~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~ 297 (430)
.+.| +|.++ +++|+ +++|++|++|..++++..+ |++++|+||++||.|+|+++++++. .+ .+.+.++.
T Consensus 153 ~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~--~~---~~~~~~~~- 225 (382)
T 4hvk_A 153 TIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEA--KL---QPVILGGG- 225 (382)
T ss_dssp BBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHHTCSEEEEESGGGTSCTTCEEEEEETTC--CC---CCSSCSSC-
T ss_pred eeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhcCCCEEEEeHHHhcCCCceEEEEEcCcc--Cc---CcccccCC-
Confidence 9999 78886 78999 9999999999988887654 7999999999899999999998765 22 22222111
Q ss_pred hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCch
Q 043610 298 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDL 377 (430)
Q Consensus 298 ~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~ 377 (430)
...+...+|++...+.++..+++++.+ +++++.++.+++++++++.|.+..|+++.. .+..+.+..+.|.+++. .
T Consensus 226 -~~~~~~~~~~~~~~~~~~~~al~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~ 300 (382)
T 4hvk_A 226 -QENGLRSGSENVPSIVGFGKAAEITAM--EWREEAERLRRLRDRIIDNVLKIEESYLNG-HPEKRLPNNVNVRFSYI-E 300 (382)
T ss_dssp -TGGGTSCSCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTSTTEEECS-CSSSBCTTEEEEEETTC-C
T ss_pred -CcCccccCCcCHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhcCCCeEEeC-CccccCCCEEEEEECCC-C
Confidence 122334578999999999999987653 689999999999999999999756888764 23334555677887642 2
Q ss_pred hHHHHHHHHHcCCeecCCCCC---------------------CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 378 EAEFVKEAAKEKMVQLKGHRS---------------------VGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 378 ~~~~~~~L~~~Gi~~~~g~~~---------------------~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
..++.+.|.++||.+.+|... .+++||+++.+++++|+++++++|++++++
T Consensus 301 ~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~ 372 (382)
T 4hvk_A 301 GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIER 372 (382)
T ss_dssp HHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 337899999999998765310 467999999999999999999999998764
No 21
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=7.7e-34 Score=282.23 Aligned_cols=337 Identities=14% Similarity=0.191 Sum_probs=257.2
Q ss_pred CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC----CCcEEEEEeCcHH
Q 043610 69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP----QEYSVLFLQGGAT 144 (430)
Q Consensus 69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~----~~~~vv~~~~gaT 144 (430)
++.++|++||.++++.|++++.+.+. .++++.+...+.++++.++++++.. ++ +++++ +|+|
T Consensus 4 ~~~~~~~p~p~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~v~~~-~g~t 69 (385)
T 2bkw_A 4 SVDTLLIPGPIILSGAVQKALDVPSL------------GHTSPEFVSIFQRVLKNTRAVFKSAAASKSQ-PFVLA-GSGT 69 (385)
T ss_dssp CCCEECSSSSCCCCHHHHHTTSCCCC------------CTTSHHHHHHHHHHHHHHHHHTTCCGGGTCE-EEEEE-SCTT
T ss_pred ccceeecCCCcCchHHHHHHHhcccc------------ccCCHHHHHHHHHHHHHHHHHhCCCCCCCCc-eEEEc-CchH
Confidence 56799999999999999999876432 2345666667788899999998874 33 66665 7899
Q ss_pred HHHHHHHhhcC---CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEec-CCCCcCCCCCCccccc--cCC-CccEEEEee
Q 043610 145 TQFAAVPLNLC---TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWS-GKAEKYTKIPNFDALE--QNP-DAKYLHICA 216 (430)
Q Consensus 145 ~a~~~~~~sl~---~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~-~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~ 216 (430)
++++.++.++. ++||+|++++.++++..+...++..| +++.++. .. .+ .+|+++++ +++ ++++|++++
T Consensus 70 ~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~---~~-~~d~~~l~~~l~~~~~~~v~~~~ 145 (385)
T 2bkw_A 70 LGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKI---GE-SVPLELITEKLSQNSYGAVTVTH 145 (385)
T ss_dssp HHHHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSST---TS-CCCHHHHHHHHHHSCCSEEEEES
T ss_pred HHHHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecCCC---CC-CCCHHHHHHHHhcCCCCEEEEEc
Confidence 99999999987 89999988877777665545566778 7777776 32 22 47888887 555 899999999
Q ss_pred cCCCccccCC--CCccc-cCC--CcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHh-ccC-
Q 043610 217 NETIHGVEFK--EYPSA-KNS--TGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLG-NAQ- 286 (430)
Q Consensus 217 ~~t~tG~~~p--ei~~~-~~~--g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~-~~~- 286 (430)
++|+||.+.| +|.++ +++ |+++++|++|++|..++++.++ |++++|+|||+ ||+|+|+++++++.++ .+.
T Consensus 146 ~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~ 225 (385)
T 2bkw_A 146 VDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALND 225 (385)
T ss_dssp EETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCH
T ss_pred cCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccCceEEEecCccccccCCcceEEEEcHHHHHHHHhh
Confidence 9999999999 78876 677 9999999999999988887765 68999999988 5999999999998877 542
Q ss_pred ----CCCCcccc---ccch---h--hcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-HccCCc
Q 043610 287 ----DKTPLMLD---YKIH---D--ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVI-DGSNGF 353 (430)
Q Consensus 287 ----~~~p~~~~---~~~~---~--~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l-~~~~G~ 353 (430)
+...++.+ +... . ..+.+++|++...++++..+++++.+ .|++++.++++++++++++.| ++ .|+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-~g~ 303 (385)
T 2bkw_A 226 SKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILE-EGLHKRWDLHREMSDWFKDSLVNG-LQL 303 (385)
T ss_dssp HHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHTT-TCC
T ss_pred ccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHH-ccHHHHHHHHHHHHHHHHHHHHHh-cCc
Confidence 11111111 1000 1 11233578999999999999998764 478999999999999999999 86 488
Q ss_pred eecCCCCCC-CccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC---CCCeeEEe-ecC---CCCHHHHHHHHHHHHHH
Q 043610 354 YKCPVEKSV-RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR---SVGGMRAS-IYN---AMPLAGVEKLVAFMKDF 425 (430)
Q Consensus 354 ~~~~~~~~~-rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~---~~g~iRis-~~~---~~t~edv~~ll~~L~~~ 425 (430)
++...++.. +...++.|.+++ ..++.+.|.++||.+.+|.. ..+.+||| +.. +++++|+++++++|+++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~ 380 (385)
T 2bkw_A 304 TSVSRYPSNMSAHGLTAVYVAD---PPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLA 380 (385)
T ss_dssp EESSCSSSTTBCSSCEEEECSC---HHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHH
T ss_pred eecccCcccccCCceEEEecCC---HHHHHHHHHHCCeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHH
Confidence 776322222 344567788874 34799999899999887643 24579999 542 47999999999999998
Q ss_pred HHh
Q 043610 426 QAK 428 (430)
Q Consensus 426 ~~~ 428 (430)
+++
T Consensus 381 ~~~ 383 (385)
T 2bkw_A 381 LQR 383 (385)
T ss_dssp TTC
T ss_pred HHh
Confidence 764
No 22
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=2.8e-33 Score=277.89 Aligned_cols=337 Identities=15% Similarity=0.127 Sum_probs=255.6
Q ss_pred ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHH
Q 043610 71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAV 150 (430)
Q Consensus 71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~ 150 (430)
+|++..+++++|+.|++++.+.+.+..+++.+ .+..+..+.+.++++++.+++++|++++ +++++ +|+|+|++.+
T Consensus 2 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~-~g~t~a~~~~ 76 (382)
T 4eb5_A 2 AYFDYTSAKPVDERILEAMLPYMTESFGNPSS---VHSYGFKAREAVQEAREKVAKLVNGGGG-TVVFT-SGATEANNLA 76 (382)
T ss_dssp CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTC---SSHHHHHHHHHHHHHHHHHHHHHTCTTE-EEEEE-SSHHHHHHHH
T ss_pred eeeccCCCCCCCHHHHHHHHHHHHhccCCCCC---CcHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEc-CchHHHHHHH
Confidence 68888889999999999999988753332221 1222445678889999999999999764 67665 8899999999
Q ss_pred HhhcC----CCCCcEEEEeCChhHHH-HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcc
Q 043610 151 PLNLC----TPNDPVDYIVTGSWGDK-AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHG 222 (430)
Q Consensus 151 ~~sl~----~~gd~vl~~~~g~~~~~-~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG 222 (430)
+.++. ++||+|++....+.+.. ....++..| +++.++..+ .+ .+|+++++ +++++++|++++++|+||
T Consensus 77 ~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~i~~~~~~v~~~~~~nptG 152 (382)
T 4eb5_A 77 IIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK---YG-EVDVSFIDQKLRDDTILVSVQHANNEIG 152 (382)
T ss_dssp HHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT---TS-CBCHHHHHHHCCTTEEEEECCSBCTTTC
T ss_pred HHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC---CC-ccCHHHHHHHhcCCCeEEEEeccCCCcc
Confidence 99987 89999998777766542 222233457 777777642 22 47888887 778899999999999999
Q ss_pred ccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccc
Q 043610 223 VEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKI 297 (430)
Q Consensus 223 ~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~ 297 (430)
.+.| +|.++ +++|++ ++|++|++|..++++..+ |++++|+||++||+|+|+++++++. .+. +.+..+.
T Consensus 153 ~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~--~l~---~~~~~~~- 225 (382)
T 4eb5_A 153 TIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEA--KLQ---PVILGGG- 225 (382)
T ss_dssp BBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHHTCSEEEEETGGGTCCSSCEEEEEETTC--CCC---CSSCSSC-
T ss_pred ccCCHHHHHHHHHHCCCE-EEEcchhcCCcccCccccCCCEEEeehHHhcCCCceEEEEEcccc--ccC---ceecCCC-
Confidence 9999 78886 789999 999999999888777644 7999999999999999999998763 111 1111110
Q ss_pred hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCch
Q 043610 298 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDL 377 (430)
Q Consensus 298 ~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~ 377 (430)
.......+|++...+.++..+++++.+ +++.+.++.+++++++.+.|++..|+++.. .+..+...++.|.+++. .
T Consensus 226 -~~~~~~~~~~~~~~~~~~~~al~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~ 300 (382)
T 4eb5_A 226 -QENGLRSGSENVPSIVGFGKAAEITAM--EWREEAERLRRLRDRIIDNVLKIEESYLNG-HPEKRLPNNVNVRFSYI-E 300 (382)
T ss_dssp -TGGGTSCSCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTSTTEEECS-CSSSBCTTEEEEEETTS-C
T ss_pred -ccccccCCCccHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHhhCCCeEEeC-CcccCCCCEEEEEeCCc-C
Confidence 011234578898888889999987763 589999999999999999999755887753 22223345677887632 2
Q ss_pred hHHHHHHHHHcCCeecCCCC---------------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 378 EAEFVKEAAKEKMVQLKGHR---------------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 378 ~~~~~~~L~~~Gi~~~~g~~---------------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
..++.+.|.++||.+.+|.. ..+.+||+++.+++++|+++++++|++++++
T Consensus 301 ~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (382)
T 4eb5_A 301 GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIER 372 (382)
T ss_dssp HHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 33799999889999877641 1357999999999999999999999998764
No 23
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=3.7e-33 Score=278.68 Aligned_cols=338 Identities=17% Similarity=0.225 Sum_probs=259.5
Q ss_pred CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610 69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA 148 (430)
Q Consensus 69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~ 148 (430)
++.|+++++|.++++.|++++.+.+. .++++...+.++++++.+++++|.++++++++ ++|+|+|++
T Consensus 33 ~~~~l~~~~~~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~-t~g~t~al~ 99 (393)
T 1vjo_A 33 PSRLLLGPGPSNAHPSVLQAMNVSPV------------GHLDPAFLALMDEIQSLLRYVWQTENPLTIAV-SGTGTAAME 99 (393)
T ss_dssp CCCEECSSSCCCCCHHHHHHHSSCCC------------CTTSHHHHHHHHHHHHHHHHHHTCCCSCEEEE-SSCHHHHHH
T ss_pred ccceeccCCCCCCCHHHHHHHhcccc------------cccCHHHHHHHHHHHHHHHHHhCCCCCcEEEE-eCchHHHHH
Confidence 46899999999999999999987652 14455677888999999999999975335665 589999999
Q ss_pred HHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCcccc
Q 043610 149 AVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIHGVE 224 (430)
Q Consensus 149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~tG~~ 224 (430)
.++.+++++||+|++..+++++..+...++..| +++.++... +..+|+++|+ +++ ++++|++++++|+||.+
T Consensus 100 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~ 175 (393)
T 1vjo_A 100 ATIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPW----GEVFSLEELRTALETHRPAILALVHAETSTGAR 175 (393)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT----TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEE
T ss_pred HHHHhccCCCCEEEEEcCChhHHHHHHHHHHcCCceEEEecCC----CCCCCHHHHHHHHhhCCceEEEEeccCCCccee
Confidence 999999999999999988887744555666778 777787643 2247888887 666 89999999999999999
Q ss_pred CC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCcccc-CCccEEEEEcHHHHhccCCC----CCcccc
Q 043610 225 FK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDK----TPLMLD 294 (430)
Q Consensus 225 ~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~----~p~~~~ 294 (430)
.| +|.++ +++|+++++|++|++|..++++..+ |++++|+||+++ |.|+|++++++++++.+... .+++++
T Consensus 176 ~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (393)
T 1vjo_A 176 QPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLD 255 (393)
T ss_dssp CCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTC
T ss_pred ccHHHHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEcCcccccCCCceEEEEECHHHHHHHhccCCCCCceecC
Confidence 99 77776 6889999999999999888887665 799999999995 77899999999988765321 222222
Q ss_pred cc---chhhcCCCC-CCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEE
Q 043610 295 YK---IHDENNSLY-NTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF 370 (430)
Q Consensus 295 ~~---~~~~~~~~~-~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f 370 (430)
.. ......... +|++...++++..+|+.+.+ .+++++.++++++++++++.|++ .|+++.. ....+.+.++.|
T Consensus 256 ~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~~~~~~~~~~~ 332 (393)
T 1vjo_A 256 MNLLGKYWGSERVYHHTAPINLYYALREALRLIAQ-EGLANCWQRHQKNVEYLWERLED-IGLSLHV-EKEYRLPTLTTV 332 (393)
T ss_dssp HHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHH-TTCCBSS-CGGGBCSSEEEE
T ss_pred cHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHH-ccHHHHHHHHHHHHHHHHHHHHH-cCCcccC-CccccCCcEEEE
Confidence 10 001112233 48999999999999998753 47899999999999999999997 4887653 222223456778
Q ss_pred EcCCCchhHHHHHHHHHc-CCeecCCCC--CCCeeEEeecC-CCCHHHHHHHHHHHHHHH
Q 043610 371 TLEKSDLEAEFVKEAAKE-KMVQLKGHR--SVGGMRASIYN-AMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 371 ~~~~~~~~~~~~~~L~~~-Gi~~~~g~~--~~g~iRis~~~-~~t~edv~~ll~~L~~~~ 426 (430)
.+++.....++.++|.++ ||.+.+|.. ..+++|||+.. .++++++++++++|++++
T Consensus 333 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 333 CIPDGVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp ECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred EcCCCCCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 876422233799999887 999887653 24689999654 456788999999999876
No 24
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=7.6e-34 Score=283.48 Aligned_cols=313 Identities=15% Similarity=0.151 Sum_probs=242.9
Q ss_pred cCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC---C
Q 043610 106 MSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC---N 182 (430)
Q Consensus 106 ~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g---~ 182 (430)
.+|+++.+.+.++++++.+++++|++ + ++++ ++|+|+++++++.. +.+||+|++..+++++..|...++..| +
T Consensus 26 ~~h~~~~~~~~~~~~~~~l~~~~~~~-~-~v~~-~~sgt~a~~~~~~~-~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~ 101 (379)
T 3ke3_A 26 LNHMSKAFQEVMNDLLSNLKTVYNAE-A-AVII-PGSGTYGMEAVARQ-LTIDEDCLIIRNGWFSYRWTQILEKGKFAKS 101 (379)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHHHTCS-E-EEEE-ESCHHHHHHHHHHH-HCTTCEEEEEECSHHHHHHHHHHHHHCCSSE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCC-C-EEEE-cCChhHHHHHHHHh-CCCCCeEEEEeCCchhHHHHHHHHHhCCCCc
Confidence 57889999999999999999999997 2 5554 68999999998754 479999999999999988777777666 3
Q ss_pred ceEEecCCC--CcCC---CCCCccccc--c-CCCccEEEEeecCCCccccCC-----CCccc-cCCCcEEEEeccCcCCC
Q 043610 183 PQVIWSGKA--EKYT---KIPNFDALE--Q-NPDAKYLHICANETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCS 248 (430)
Q Consensus 183 ~~~v~~~~~--~~~g---~~~d~~~l~--i-~~~~~lv~i~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~ 248 (430)
++.++.... ..+. ..+|+++++ + ++++++|+++|++|++|.++| +|.++ +++|+++++|++|+ |.
T Consensus 102 ~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~ 180 (379)
T 3ke3_A 102 STVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GC 180 (379)
T ss_dssp EEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TT
T ss_pred eEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CC
Confidence 444544210 0011 146778876 5 358999999999999999999 35554 58999999999999 99
Q ss_pred Cccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCC--CCCccccccch------hhcCC--CCCCccHHHHHH
Q 043610 249 KPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQD--KTPLMLDYKIH------DENNS--LYNTPPCYCIYM 315 (430)
Q Consensus 249 ~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~--~~p~~~~~~~~------~~~~~--~~~T~~~~~~~a 315 (430)
.++++.++ |++++++|||+ ||+|+|++++++++++.+.+ ..++++++..+ .+.+. +.+|+|+..+++
T Consensus 181 ~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a 260 (379)
T 3ke3_A 181 VWLDMKELGIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQ 260 (379)
T ss_dssp CCCCHHHHTCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHH
T ss_pred ccccccccCCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHH
Confidence 99888755 79999999999 59999999999999887643 23344443221 12232 236999999999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCC
Q 043610 316 CGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKG 395 (430)
Q Consensus 316 ~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g 395 (430)
+.++|+++.+ .|++++.+++++++++++++|.+ .|++++. ++..+++.++.+..++ .+..+.+.|.++||.+.+|
T Consensus 261 ~~aal~~~~~-~g~~~~~~~~~~l~~~l~~~l~~-~g~~~~~-~~~~~~~~i~~~~~~~--~~~~~~~~L~~~Gi~v~~g 335 (379)
T 3ke3_A 261 FRDAILEAKE-IGFDILRDAQWELGNRVRKVLTD-KGIESVA-AEGFEAPGVVVSYTER--DDMHKGSAFAEAGLQIAAG 335 (379)
T ss_dssp HHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHH-TTCCBSB-CTTCBCSSEEEEECSC--HHHHSSHHHHHTTCCCEEC
T ss_pred HHHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHH-cCCEecC-CccccCceEEEEccCC--cchHHHHHHHHCCeEEeCC
Confidence 9999998875 48999999999999999999997 6888764 4445677666666543 2223467788899998776
Q ss_pred CC-------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 396 HR-------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 396 ~~-------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
.. ..+.+|||++.++|++||++++++|++++++
T Consensus 336 ~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~ 375 (379)
T 3ke3_A 336 VPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDE 375 (379)
T ss_dssp CCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHH
T ss_pred ccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHH
Confidence 42 1457999999999999999999999998765
No 25
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=7.2e-33 Score=275.69 Aligned_cols=347 Identities=14% Similarity=0.096 Sum_probs=259.9
Q ss_pred CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610 68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF 147 (430)
Q Consensus 68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~ 147 (430)
++.+|++.+++++.|+.|++++.+.+.+....+.. .+...+.+.....++++.+++++|++++ +++++ +|+|+++
T Consensus 15 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~y~~~~~~~~~l~~~la~~~g~~~~-~v~~~-~g~t~a~ 89 (390)
T 1elu_A 15 ANKTYFNFGGQGILPTVALEAITAMYGYLQENGPF---SIAANQHIQQLIAQLRQALAETFNVDPN-TITIT-DNVTTGC 89 (390)
T ss_dssp TTSEECCTTTCCCCCHHHHHHHHHHHHHHHHHCSS---SHHHHHHHHHHHHHHHHHHHHHTTSCGG-GEEEE-SSHHHHH
T ss_pred CCeEEecCCccCCCCHHHHHHHHHHHHHHhccCCc---chhhHHHHHHHHHHHHHHHHHHcCCCHH-HEEEe-CChHHHH
Confidence 45678888888888999999999988653211100 0012344456788999999999999765 67765 7899999
Q ss_pred HHHHhhc-CCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610 148 AAVPLNL-CTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH 221 (430)
Q Consensus 148 ~~~~~sl-~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t 221 (430)
+.++..+ +++||+|++..+++.+.. |...++..| +++.++...+ .+..+|+++++ +++++++|++++++|+|
T Consensus 90 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~~npt 167 (390)
T 1elu_A 90 DIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAAT--LNQGDAAAVLANHLGPKTRLVILSHLLWNT 167 (390)
T ss_dssp HHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGG--SSSSCHHHHHHTTCCTTEEEEEEESBCTTT
T ss_pred HHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCC--CCccchHHHHHHhcCCCceEEEEeccccCC
Confidence 9999999 799999998887777654 334456667 7777776421 12246788886 67889999999999999
Q ss_pred cccCC--CCccc-c----CCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCCCCc
Q 043610 222 GVEFK--EYPSA-K----NSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPL 291 (430)
Q Consensus 222 G~~~p--ei~~~-~----~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~ 291 (430)
|.+.| +|.++ + ++|+++++|++|++|..++++.++ |++++|+|||+ |+.|+|++++++++++.+.+....
T Consensus 168 G~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~g 247 (390)
T 1elu_A 168 GQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVG 247 (390)
T ss_dssp CCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCSCC
T ss_pred ceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcCCCEEEccccccccCCCceEEEEECHHhHhhcCCcccc
Confidence 99999 78775 6 899999999999999988877654 79999999977 688999999999888776542210
Q ss_pred c-----------ccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC
Q 043610 292 M-----------LDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK 360 (430)
Q Consensus 292 ~-----------~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~ 360 (430)
+ +++.... .....+|++...+.++..+++.+.+.+.++++.++++++++++++.|++..|+++....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~- 325 (390)
T 1elu_A 248 WRSITYGAKGEPTGWAEGG-KRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATS- 325 (390)
T ss_dssp TTTEEECTTSCEEEECSGG-GGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSS-
T ss_pred CCcccccccCcccccccch-HhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCc-
Confidence 0 0010000 11234788988999999999987655449999999999999999999975588876311
Q ss_pred CCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610 361 SVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF 425 (430)
Q Consensus 361 ~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~ 425 (430)
...+ ..+.|.+++.....++.++|.++||.+.+|. ..+++|||++.+++++|+++++++|+++
T Consensus 326 ~~~~-~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~-~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 326 APQA-GLVSFTVDSPLGHRAIVQKLEEQRIYLRTIA-DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp CCSS-SEEEEEECSSSCHHHHHHHHHHTTEECEEET-TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred cccc-cEEEEEcCCCCCHHHHHHHHHHCCEEEEecC-CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 1233 4567777532123379999999999987754 2468999998899999999999999764
No 26
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1e-32 Score=276.68 Aligned_cols=342 Identities=11% Similarity=0.069 Sum_probs=258.1
Q ss_pred CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610 69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA 148 (430)
Q Consensus 69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~ 148 (430)
+.+|++..+++++|+.|++++.+.+.+...+..+ .+.++......++++++.+++++|++++ +|+++ +|+|++++
T Consensus 26 ~~~~ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~-~g~t~al~ 100 (406)
T 3cai_A 26 GWVHFDAPAGMLIPDSVATTVSTAFRRSGASTVG---AHPSARRSAAVLDAAREAVADLVNADPG-GVVLG-ADRAVLLS 100 (406)
T ss_dssp SCEECBGGGCCCCCHHHHHHHHHHHHHCCSSSCS---SSHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEE-SCHHHHHH
T ss_pred CeEEEeCCCcCCCCHHHHHHHHHHHHhcCCCCCC---ccHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-CChHHHHH
Confidence 3688888888899999999999988754322211 1112344567888999999999999765 67775 78999999
Q ss_pred HHHhhc---CCCCCcEEEEeCChhHH--HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610 149 AVPLNL---CTPNDPVDYIVTGSWGD--KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI 220 (430)
Q Consensus 149 ~~~~sl---~~~gd~vl~~~~g~~~~--~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~ 220 (430)
.++.++ +++||+|++....+.+. .+...+++.| +++.++...+ .+ .+|+++|+ +++++++|++++++|+
T Consensus 101 ~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~--~~-~~d~~~l~~~l~~~~~~v~~~~~~np 177 (406)
T 3cai_A 101 LLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIE--TG-ELPTWQWESLISKSTRLVAVNSASGT 177 (406)
T ss_dssp HHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTT--TC-CCCGGGHHHHCCTTEEEEEEESBCTT
T ss_pred HHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcc--cC-CcCHHHHHHHhCCCceEEEEeCCcCC
Confidence 988887 68899999877666553 2333344567 7777876421 23 47888887 7889999999999999
Q ss_pred ccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccE-EEEEcHHHHhccCCCCCcccc
Q 043610 221 HGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVT-IVIVRKDLLGNAQDKTPLMLD 294 (430)
Q Consensus 221 tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g-~l~v~~~~~~~~~~~~p~~~~ 294 (430)
||.+.| +|.++ +++|+++++|++|+.|..++++.++ |++++|+||++||. +| ++++++++++.+.+... +++
T Consensus 178 tG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~~g~~-~G~~~~~~~~~~~~l~~~~~-~~~ 255 (406)
T 3cai_A 178 LGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGPP-IGAMVFRDPSVMNSFGSVST-NPY 255 (406)
T ss_dssp TCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHHCCSEEEEEGGGGTSCS-CEEEEESCHHHHHTSCCCCS-CTT
T ss_pred ccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhcCCCEEEeehhhhcCCC-cCeEEEEehHHHhhcCCccc-CCC
Confidence 999999 78886 6899999999999999888777654 69999999999975 89 99999998877654221 111
Q ss_pred ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhc-------------CHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 043610 295 YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELG-------------GLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS 361 (430)
Q Consensus 295 ~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~-------------g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~ 361 (430)
. ........+|++...+.++..+++++.+.+ +++.+.++.+++++++++.|++..|+++.. ...
T Consensus 256 ~--~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~ 332 (406)
T 3cai_A 256 A--TGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIG-RPE 332 (406)
T ss_dssp C--CGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECC-CCS
T ss_pred C--CccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcC-Ccc
Confidence 1 011112357899999989999999876432 278999999999999999999755887753 222
Q ss_pred CCccceEEEEcCCCchhHHHHHHHHHcCCeecCCC--------C---CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610 362 VRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGH--------R---SVGGMRASIYNAMPLAGVEKLVAFMKDF 425 (430)
Q Consensus 362 ~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~--------~---~~g~iRis~~~~~t~edv~~ll~~L~~~ 425 (430)
.+++ .+.|.+++ ....++.+.|.++||.+.+|. . ..+.+|||++.+++++|+++++++|+++
T Consensus 333 ~~~~-~~~~~~~~-~~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 333 AQIP-VVSFAVHK-VPADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp SBCS-EEEEEETT-BCHHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred ccCC-EEEEEECC-cCHHHHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 3455 57788774 123378899989999987654 1 1357999999999999999999999763
No 27
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=2.8e-32 Score=272.62 Aligned_cols=346 Identities=16% Similarity=0.144 Sum_probs=260.5
Q ss_pred CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEeCcHHHHH
Q 043610 69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI-PQEYSVLFLQGGATTQF 147 (430)
Q Consensus 69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~-~~~~~vv~~~~gaT~a~ 147 (430)
+.+|+...++++.|+.|++++.+.+.++..+.... .+..+.......+++++.+++++|. +++ +++++ +|+|+|+
T Consensus 23 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~~~-~v~~~-~g~t~a~ 98 (406)
T 1kmj_A 23 PLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRG--IHTLSAQATEKMENVRKRASLFINARSAE-ELVFV-RGTTEGI 98 (406)
T ss_dssp ECEECCTTTCCCCCHHHHHHHHHHHHHTCCCCSSC--SSHHHHHHHHHHHHHHHHHHHHTTCSCGG-GEEEE-SSHHHHH
T ss_pred ceEEecCCccCCCCHHHHHHHHHHHHhhcCCCCCC--cchHHHHHHHHHHHHHHHHHHHcCCCCCC-eEEEe-CChhHHH
Confidence 35788888788899999999999887543211100 0111223456788999999999999 443 67775 7899999
Q ss_pred HHHHhhc----CCCCCcEEEEeCChhHH--HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecC
Q 043610 148 AAVPLNL----CTPNDPVDYIVTGSWGD--KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANE 218 (430)
Q Consensus 148 ~~~~~sl----~~~gd~vl~~~~g~~~~--~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~ 218 (430)
+.++.++ +++||+|++..+++.+. .+...++..| +++.++..+ +..+|+++++ +++++++|++++++
T Consensus 99 ~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~d~~~l~~~l~~~~~~v~~~~~~ 174 (406)
T 1kmj_A 99 NLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP----DGTLQLETLPTLFDEKTRLLAITHVS 174 (406)
T ss_dssp HHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT----TSCBCGGGHHHHCCTTEEEEEEESBC
T ss_pred HHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC----CCCcCHHHHHHHhccCCeEEEEeCCC
Confidence 9999999 89999999888877653 2444556667 777777642 2247888887 78899999999999
Q ss_pred CCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCc--
Q 043610 219 TIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPL-- 291 (430)
Q Consensus 219 t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~-- 291 (430)
|+||.+.| +|.++ +++|+++++|++|+.|..++++.++ |++++|+||++||+|+|++++++++++.+.+....
T Consensus 175 nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~~g~~G~G~~~~~~~~~~~~~~~~~~~~ 254 (406)
T 1kmj_A 175 NVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGS 254 (406)
T ss_dssp TTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHHHHHHCCCSSCSTT
T ss_pred ccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEEchhccCCCCcEEEEEeHHHHhhcCCcccCCC
Confidence 99999999 78886 6899999999999999887777654 69999999999999999999999998876542210
Q ss_pred cc---------cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610 292 ML---------DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV 362 (430)
Q Consensus 292 ~~---------~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~ 362 (430)
+. .+... ......+|++...++++..+++++.+ .+++.+.++.+++++++++.|++..|+++.. .. .
T Consensus 255 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~-~ 330 (406)
T 1kmj_A 255 MIATVSLSEGTTWTKA-PWRFEAGTPNTGGIIGLGAALEYVSA-LGLNNIAEYEQNLMHYALSQLESVPDLTLYG-PQ-N 330 (406)
T ss_dssp SEEEEETTTEEEECCT-TGGGCCSSCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHTTSTTEEEES-CT-T
T ss_pred ceeecccccccccCCC-chhccCCCCCHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CC-C
Confidence 00 00000 01123468888888888889998764 4799999999999999999999755887764 21 2
Q ss_pred CccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC----------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 363 RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR----------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 363 rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~----------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
++ ..+.|.+++. ...++.+.|.++||.+.+|.. ..+++|||++.+++++|+++++++|+++++.
T Consensus 331 ~~-~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 404 (406)
T 1kmj_A 331 RL-GVIAFNLGKH-HAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRL 404 (406)
T ss_dssp CC-SEEEEEETTC-CHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cC-CEEEEEECCC-CHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 34 4566777632 123688889999999876531 1368999999999999999999999998764
No 28
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=3.3e-32 Score=270.13 Aligned_cols=337 Identities=15% Similarity=0.109 Sum_probs=253.9
Q ss_pred ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHH
Q 043610 71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAV 150 (430)
Q Consensus 71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~ 150 (430)
+|++..+.++.|+.|++++.+.+.+..+.+.+ .++++......++++++.+++++|++++ +++++ +|+|++++.+
T Consensus 3 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~-~g~t~a~~~~ 77 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVLEEMIVFYREKYGNPNS---AHGMGIEANLHMEKAREKVAKVLGVSPS-EIFFT-SCATESINWI 77 (384)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHTCCCCTTC---SSHHHHHHHHHHHHHHHHHHHHHTSCGG-GEEEE-SCHHHHHHHH
T ss_pred EEEecCccCCCCHHHHHHHHHHHHhcCCCCcc---ccHHHHHHHHHHHHHHHHHHHHcCCCCC-eEEEE-CCHHHHHHHH
Confidence 78888888899999999999988653222221 1223455667888999999999999865 67765 7899999999
Q ss_pred HhhcC----CCCCcEEEEeCChhHHH-HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcc
Q 043610 151 PLNLC----TPNDPVDYIVTGSWGDK-AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHG 222 (430)
Q Consensus 151 ~~sl~----~~gd~vl~~~~g~~~~~-~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG 222 (430)
+..+. ++||+|++....+.+.. ....++..| +++.++... .+ .+|+++|+ +++++++|++++++|+||
T Consensus 78 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~i~~~~~~v~~~~~~nptG 153 (384)
T 1eg5_A 78 LKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS---RG-VVKLEELEKLVDEDTFLVSIMAANNEVG 153 (384)
T ss_dssp HHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT---TS-CBCHHHHHHHCCTTEEEEEEESBCTTTC
T ss_pred HHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC---CC-ccCHHHHHHHhCCCCeEEEEECCCCCcc
Confidence 99886 78999988776666542 222334567 766666542 22 47888887 778999999999999999
Q ss_pred ccCC--CCccc-cCCC--cEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccc
Q 043610 223 VEFK--EYPSA-KNST--GILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDY 295 (430)
Q Consensus 223 ~~~p--ei~~~-~~~g--~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~ 295 (430)
.+.| +|.++ +++| +++++|++|++|..++++..+ |++++|+||++||+|+|++++++++ .+ .+.+..+
T Consensus 154 ~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~G~G~~~~~~~~--~~---~~~~~~~ 228 (384)
T 1eg5_A 154 TIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGV--PI---RPLIHGG 228 (384)
T ss_dssp BBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGTSCTTCEEEEECTTS--CC---CCSBCSS
T ss_pred cccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEecHHHhcCCCceEEEEEcCCC--cc---ccccccC
Confidence 9999 78886 6788 999999999999887777654 7999999999999999999999875 11 1111111
Q ss_pred cchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC
Q 043610 296 KIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS 375 (430)
Q Consensus 296 ~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~ 375 (430)
. .......++++...+.++..+|+...+ +++++.++++++++++++.|.+ .|+++.. .+....+..+.|.+++.
T Consensus 229 ~--~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~~~~~~~~~~~~~~~~ 302 (384)
T 1eg5_A 229 G--QERGLRSGTQNVPGIVGAARAMEIAVE--ELSEAAKHMEKLRSKLVSGLMN-LGAHIIT-PLEISLPNTLSVSFPNI 302 (384)
T ss_dssp C--TTTTTBCSCCCHHHHHHHHHHHHHHHH--THHHHHHHHHHHHHHHHHHHHT-TTCEECS-CTTSBCTTEEEEECTTC
T ss_pred c--ccccccCCCCChHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHhCC-CCeEEeC-CcccCCCCEEEEEeCCC
Confidence 1 011223468899999999999987543 6899999999999999999997 7887763 22223345677877642
Q ss_pred chhHHHHHHHHHcCCeecCCCCC---------------------CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 376 DLEAEFVKEAAKEKMVQLKGHRS---------------------VGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 376 ~~~~~~~~~L~~~Gi~~~~g~~~---------------------~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
...++.+.|.++||.+.+|... .+++||+++.+++++|+++++++|++++++
T Consensus 303 -~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 375 (384)
T 1eg5_A 303 -RGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSF 375 (384)
T ss_dssp -CHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 2337889999999998775311 257999999889999999999999998764
No 29
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=1.6e-31 Score=268.57 Aligned_cols=347 Identities=13% Similarity=0.110 Sum_probs=259.7
Q ss_pred CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEeCcHHHHHH
Q 043610 70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI-PQEYSVLFLQGGATTQFA 148 (430)
Q Consensus 70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~-~~~~~vv~~~~gaT~a~~ 148 (430)
.+++....+.+.|+.|++++.+.+.++..+... ....++..+...++++++.+++++|. +++ +++++ +|+|+|++
T Consensus 29 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~--~~~~y~~~~~~~~~~l~~~la~~~~~~~~~-~v~~~-~g~t~a~~ 104 (420)
T 1t3i_A 29 LVYLDNAATSQKPRAVLEKLMHYYENDNANVHR--GAHQLSVRATDAYEAVRNKVAKFINARSPR-EIVYT-RNATEAIN 104 (420)
T ss_dssp CEECBTTTCCCCCHHHHHHHHHHHHHTCCCC----CCSHHHHHHHHHHHHHHHHHHHHTTCSCGG-GEEEE-SSHHHHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhccCCCCc--ccchHHHHHHHHHHHHHHHHHHHcCCCCCC-eEEEc-CChHHHHH
Confidence 466666777788999999999988764322110 01223334457788999999999999 544 67775 78999999
Q ss_pred HHHhhc----CCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCC
Q 043610 149 AVPLNL----CTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANET 219 (430)
Q Consensus 149 ~~~~sl----~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t 219 (430)
.++.++ +++||+|++...++.+.. +...++..| +++.++... .+ .+|+++++ +++++++|++++++|
T Consensus 105 ~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~l~~~~~~v~~~~~~n 180 (420)
T 1t3i_A 105 LVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDE---QE-SFDLEHFKTLLSEKTKLVTVVHISN 180 (420)
T ss_dssp HHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCT---TS-SBCHHHHHHHCCTTEEEEEEESBCT
T ss_pred HHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCC---CC-CcCHHHHHHhhCCCceEEEEeCCcc
Confidence 999999 899999998887777632 444556678 777777642 22 47888887 788999999999999
Q ss_pred CccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCcc--
Q 043610 220 IHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLM-- 292 (430)
Q Consensus 220 ~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~-- 292 (430)
+||.+.| +|.++ +++|+++++|++|++|..++++.++ |++++|+||.+||.|+|++++++++++.+.+.....
T Consensus 181 ptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~G~~~~~~~~~~~~~~~~~~~~~ 260 (420)
T 1t3i_A 181 TLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMCAPTGIGFLYGKEEILEAMPPFFGGGEM 260 (420)
T ss_dssp TTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHHHHHHSCCCSCSTTS
T ss_pred cccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhcCCCEEEEehhhhcCCCceEEEEEchHHHhhcCceecCCCc
Confidence 9999999 78886 6899999999999999887776654 799999999889999999999999988765422110
Q ss_pred c--------cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC--C
Q 043610 293 L--------DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS--V 362 (430)
Q Consensus 293 ~--------~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~--~ 362 (430)
. .|.. ...+...++++...++++..+++++.+ .+++.+.++.+++++++++.|++..|+++...... .
T Consensus 261 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~ 338 (420)
T 1t3i_A 261 IAEVFFDHFTTGE-LPHKFEAGTPAIAEAIALGAAVDYLTD-LGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGD 338 (420)
T ss_dssp EEEECSSCEEECC-TTGGGCCSSCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSC
T ss_pred cccccccccCCCC-chhhccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccc
Confidence 0 0000 001122468888888888888988764 47899999999999999999997558887642110 1
Q ss_pred CccceEEEEcCCCchhHHHHHHHHHcCCeecCCC----------CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 363 RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGH----------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 363 rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~----------~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
++ ..+.|.+++ ....++.+.|.++||.+.+|. ...+++|||++.+++++|+++++++|+++++.
T Consensus 339 ~~-~~~~~~~~~-~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 412 (420)
T 1t3i_A 339 RA-ALASFNVAG-LHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRF 412 (420)
T ss_dssp BC-SEEEEEETT-BCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cC-CEEEEEECC-CCHHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 34 456777764 112368888999999988763 11457999999999999999999999998764
No 30
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=100.00 E-value=1.5e-32 Score=274.73 Aligned_cols=345 Identities=14% Similarity=0.115 Sum_probs=240.9
Q ss_pred CCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610 67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ 146 (430)
Q Consensus 67 ~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a 146 (430)
....+|++.++++++|+.|++++.+.+.+..+++.+. +..+....+.++++++.+++++|++++ +++++ +|+|+|
T Consensus 18 ~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~la~~~~~~~~-~v~~~-~g~t~a 92 (400)
T 3vax_A 18 GSHMTYLDAAATTRVDQRVADIVLHWMTAEFGNAGSR---HEYGIRAKRGVERAREYLASTVSAEPD-ELIFT-SGATES 92 (400)
T ss_dssp ----CCCCCCCCSSSCHHHHHHHHHHHHHHHSCSSCH---HHHHHHHHHHHHHHHHHHHHHTTCCGG-GEEEE-SCHHHH
T ss_pred cCCcEEecCCCCCCCCHHHHHHHHHHHHhccCCCccc---chhHHHHHHHHHHHHHHHHHHcCCCCC-cEEEe-CCHHHH
Confidence 3445899999999999999999999887644433321 122345567788999999999999865 67775 789999
Q ss_pred HHHHHhhcC----CCCC-cEEEEeCChhHHH-HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeec
Q 043610 147 FAAVPLNLC----TPND-PVDYIVTGSWGDK-AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICAN 217 (430)
Q Consensus 147 ~~~~~~sl~----~~gd-~vl~~~~g~~~~~-~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~ 217 (430)
++.++.++. ++|| +|++....+.+.. .....++.| +++.++..+ +..+|+++++ +++++++|+++++
T Consensus 93 l~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~i~~~~~~v~~~~~ 168 (400)
T 3vax_A 93 NNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP----SGRISVEGVMERLRPDTLLVSLMHV 168 (400)
T ss_dssp HHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT----TCCCCHHHHHTTCCTTEEEEECCSB
T ss_pred HHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC----CCCcCHHHHHHhcCCCceEEEEECC
Confidence 999999987 7899 9987766665532 122334457 777777643 2257888887 7889999999999
Q ss_pred CCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcccccc-ccEEEeCCCccccCCccEEEE-EcHHHHhcc-CCCCCc
Q 043610 218 ETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTR-FGVIYAGAQKNVGPSGVTIVI-VRKDLLGNA-QDKTPL 291 (430)
Q Consensus 218 ~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~-~d~~~~s~~K~~gp~G~g~l~-v~~~~~~~~-~~~~p~ 291 (430)
+|+||.+.| +|.++ +++|+++++|++|++|..++++.. .|++++|+||++||.|+|+++ ++++.+... ....+.
T Consensus 169 ~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~ 248 (400)
T 3vax_A 169 NNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTPIDMISISGHKIGAPKGVGALVTRRREEMDDERVPLEPI 248 (400)
T ss_dssp CTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSCCSEEEEETGGGTSCSSCEEEEECBCSSSTTCBCCCCCS
T ss_pred CCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhcCcEEEEeHHHhCCCCceEEEEEecchhccccccccCce
Confidence 999999999 78886 789999999999999998888766 589999999987999999999 987432210 111222
Q ss_pred cccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEE
Q 043610 292 MLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFT 371 (430)
Q Consensus 292 ~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~ 371 (430)
+..+. ...+...+|++...++++..+++.+.+ +++++.++++++++++++.|+ ..|+++.. ....+.+..+.|.
T Consensus 249 ~~~~~--~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~-~~~~~~~~~~~~~ 322 (400)
T 3vax_A 249 MFGGG--QERKLRPGTLPVPLIMGLAEAAKIFEA--EHAQWQVAAQDLRSRLLAGLA-STSFQVNG-DQDHVVPHILNLS 322 (400)
T ss_dssp SCSSC--TGGGTSCSCCCHHHHHHHHHHHHHHHH--SHHHHHHHHHHHHHHHHHHHT-TTTCEECS-CTTSBCTTEEEEE
T ss_pred ecCCC--ceeeeecCCCCHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHhhC-CCCEEEeC-CcccCCCCEEEEE
Confidence 21111 122334578999999999999997753 789999999999999999998 68888764 2223444567788
Q ss_pred cCCCchhHHHHHHHHHcCCeecCCCC-----------------C----CCeeEEee-cCCCCHHHHHHHHHHHHHHHHh
Q 043610 372 LEKSDLEAEFVKEAAKEKMVQLKGHR-----------------S----VGGMRASI-YNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 372 ~~~~~~~~~~~~~L~~~Gi~~~~g~~-----------------~----~g~iRis~-~~~~t~edv~~ll~~L~~~~~~ 428 (430)
+++. ...++.+.|. +||.+.+|.. . .+++||++ +.+++++|+++++++|++++++
T Consensus 323 ~~~~-~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 323 FEDV-DAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp CTTC-CHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred eCCC-CHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 7742 2337889999 9998766521 0 36899999 9899999999999999998764
No 31
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=100.00 E-value=5.9e-33 Score=284.32 Aligned_cols=347 Identities=11% Similarity=0.091 Sum_probs=257.8
Q ss_pred CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610 68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF 147 (430)
Q Consensus 68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~ 147 (430)
.+.+|+++.+.++.|+.|.+++.+.+..|...+...+..+ ...+.+..+++++.+++++|++++ +|++ ++|+|+++
T Consensus 66 ~~~iyld~~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~--~~~~~~~~~~l~~~la~~~g~~~~-~v~~-t~g~t~al 141 (465)
T 3e9k_A 66 ENAIYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVG--KRPWITGDESIVGLMKDIVGANEK-EIAL-MNALTVNL 141 (465)
T ss_dssp CBCEECBTTTSCCEETTHHHHHHHHHHHHHHHGGGGGTSS--SSCGGGTTHHHHGGGHHHHTCCGG-GEEE-CSCHHHHH
T ss_pred CCeEEecCCccCCChHHHHHHHHHHHHHHHhhCCcccccC--CccHHHhHHHHHHHHHHHcCCCcC-CEEE-ECCHHHHH
Confidence 4568999888888899999988888866643322111111 123445566889999999999875 7776 58999999
Q ss_pred HHHHhhcCCCCCc---EEEEeCChhHHH--HHHHHHHhC-Cce----EEecCCCCcCCCCCCccccc--cC---CCccEE
Q 043610 148 AAVPLNLCTPNDP---VDYIVTGSWGDK--AFKEAQKFC-NPQ----VIWSGKAEKYTKIPNFDALE--QN---PDAKYL 212 (430)
Q Consensus 148 ~~~~~sl~~~gd~---vl~~~~g~~~~~--~~~~a~~~g-~~~----~v~~~~~~~~g~~~d~~~l~--i~---~~~~lv 212 (430)
+.++.+++++|++ |++....|.+.. |...++..| ++. .+...+ ....+|+++++ ++ +++++|
T Consensus 142 ~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~---~~~~~d~~~l~~~i~~~~~~~~lv 218 (465)
T 3e9k_A 142 HLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPRE---GEETLRIEDILEVIEKEGDSIAVI 218 (465)
T ss_dssp HHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCT---TCSSCCHHHHHHHHHHHGGGEEEE
T ss_pred HHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCC---CCCccCHHHHHHHHHhcCCCeEEE
Confidence 9999999876655 887777766632 434556677 652 121111 22357888887 54 789999
Q ss_pred EEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc--cCCccEEEEEcHHHHhcc
Q 043610 213 HICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV--GPSGVTIVIVRKDLLGNA 285 (430)
Q Consensus 213 ~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~--gp~G~g~l~v~~~~~~~~ 285 (430)
++++++|+||.++| +|.++ +++|+++++|++|+.|..++++.++ |++++|+||++ ||.|+|++++++++++.+
T Consensus 219 ~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~ 298 (465)
T 3e9k_A 219 LFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTI 298 (465)
T ss_dssp EEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCEEEECSSSTTCCCTTCCCEEEECGGGTTTS
T ss_pred EEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCEEEECcccccccCCCceEEEEEcHHHHhhc
Confidence 99999999999999 78886 6899999999999999999998866 79999999999 588899999999998765
Q ss_pred CCCCCccccc--------------cchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc-
Q 043610 286 QDKTPLMLDY--------------KIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS- 350 (430)
Q Consensus 286 ~~~~p~~~~~--------------~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~- 350 (430)
.+....++.. .... .+...||+++..+.++.++++.+.+ .|+++++++..++++++++.|++.
T Consensus 299 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~gt~~~~~~~a~~aal~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~ 376 (465)
T 3e9k_A 299 KPALVGWFGHELSTRFKMDNKLQLIPGV-CGFRISNPPILLVCSLHASLEIFKQ-ATMKALRKKSVLLTGYLEYLIKHNY 376 (465)
T ss_dssp CCSSCCGGGBCHHHHTTCCSCCCBCSSG-GGGCCSCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcccCccCCCCCcccccCCCcCcCCCh-HHhccCCccHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 5432211110 0000 1123469999999999999998875 489999999999999999999874
Q ss_pred ---------CCceecCCC-CCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEee-cCCCCHHHHHHHH
Q 043610 351 ---------NGFYKCPVE-KSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASI-YNAMPLAGVEKLV 419 (430)
Q Consensus 351 ---------~G~~~~~~~-~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~-~~~~t~edv~~ll 419 (430)
.|++++... +..++ ..++|.++. . ..++.+.|.++||.+.. +..++||||+ +.+++++||++++
T Consensus 377 ~~~~~~~~~~g~~~~~p~~~~~~g-~~~~~~~~~-~-~~~l~~~L~~~Gi~v~~--~~~~~iRis~~~~~~t~edi~~~~ 451 (465)
T 3e9k_A 377 GKDKAATKKPVVNIITPSHVEERG-CQLTITFSV-P-NKDVFQELEKRGVVCDK--RNPNGIRVAPVPLYNSFHDVYKFT 451 (465)
T ss_dssp C---------CEEECSCSSGGGBC-SCEEEEECC-T-TCCHHHHHHTTTEECEE--ETTTEEEEBCCTTTCCHHHHHHHH
T ss_pred cccccccCCCCeEEeCCCCHhhcc-cEEEEEecC-C-HHHHHHHHHHCCEEEec--CCCCEEEEeCcccCCCHHHHHHHH
Confidence 688877422 22344 467788762 1 22688999999998753 2346899999 7899999999999
Q ss_pred HHHHHHHHh
Q 043610 420 AFMKDFQAK 428 (430)
Q Consensus 420 ~~L~~~~~~ 428 (430)
++|++++++
T Consensus 452 ~~l~~~l~~ 460 (465)
T 3e9k_A 452 NLLTSILDS 460 (465)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 999998763
No 32
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=2.8e-31 Score=267.63 Aligned_cols=344 Identities=13% Similarity=0.100 Sum_probs=258.4
Q ss_pred CCCCCceeecCCCCCCcHHHHHHHHHHhh--hccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH
Q 043610 66 GQEDRVFNFAAGPANLPEKVLLKAQSELY--NWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA 143 (430)
Q Consensus 66 ~~~~~~~l~~~gp~~~~~~V~~a~~~~~~--~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga 143 (430)
...+.+|++.++++++|+.|++++.+.+. +..+.+.+ ..+..+....+.++++++.+++++|++++ +|+++ +|+
T Consensus 19 ~~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~~-~v~~~-~gg 94 (423)
T 3lvm_A 19 AMKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPAS--RSHRFGWQAEEAVDIARNQIADLVGADPR-EIVFT-SGA 94 (423)
T ss_dssp -CCSSEECBTTTCCCCCHHHHHHHTTSSSTTSCCSCTTC--TTSHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEE-SSH
T ss_pred ccCCCEeecCCCcCCCCHHHHHHHHHHHhhcccccCCCc--cccchhHHHHHHHHHHHHHHHHHcCCCCC-eEEEe-CCh
Confidence 34566999999999999999999998876 32222221 01223445567888999999999999875 67775 789
Q ss_pred HHHHHHHHhhcC----CCCCcEEEEeCChhHHH-HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEe
Q 043610 144 TTQFAAVPLNLC----TPNDPVDYIVTGSWGDK-AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHIC 215 (430)
Q Consensus 144 T~a~~~~~~sl~----~~gd~vl~~~~g~~~~~-~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~ 215 (430)
|+|++.++.++. ++||+|++....+.+.. ....++..| +++.++... +..+|+++++ +++++++|+++
T Consensus 95 t~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~i~~~~~~v~~~ 170 (423)
T 3lvm_A 95 TESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR----NGIIDLKELEAAMRDDTILVSIM 170 (423)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT----TSCCCHHHHHHHCCTTEEEEECC
T ss_pred HHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC----CCccCHHHHHHhcCCCcEEEEEe
Confidence 999999988876 37999998777766542 222234557 777777643 2357888887 78899999999
Q ss_pred ecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCC
Q 043610 216 ANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTP 290 (430)
Q Consensus 216 ~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p 290 (430)
+++|+||.+.| +|.++ +++|+++++|++|++|..++++..+ |++++|+||++||.|+|+++++++.++.+.+..
T Consensus 171 ~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~~~~~~~~~- 249 (423)
T 3lvm_A 171 HVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQM- 249 (423)
T ss_dssp SBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSCCSEEEEESTTTTSCSSCEEEEECBTTBCCCCCSS-
T ss_pred CCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcCCCEEEechHHhcCCCCeEEEEEeccccCCCCccc-
Confidence 99999999999 78886 6889999999999999988887765 799999999889999999999988766543321
Q ss_pred ccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEE
Q 043610 291 LMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF 370 (430)
Q Consensus 291 ~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f 370 (430)
.++. .......+|++...+.++..+++.+.+ .++.+.++.+++++++++.|++..|+++.. .+..+.+..+.|
T Consensus 250 --~~~~--~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~ 322 (423)
T 3lvm_A 250 --HGGG--HERGMRSGTLPVHQIVGMGEAYRIAKE--EMATEMERLRGLRNRLWNGIKDIEEVYLNG-DLEHGAPNILNV 322 (423)
T ss_dssp --CSSC--TTTTTCCSCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTSTTEEEES-CSTTBCTTEEEE
T ss_pred --cCCc--ccccccCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCEEEeC-CccccCCCeEEE
Confidence 1111 112234578899999999999987764 378999999999999999998755888764 333344556777
Q ss_pred EcCCCchhHHHHHHHHHcCCeecCCCC---------------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 371 TLEKSDLEAEFVKEAAKEKMVQLKGHR---------------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 371 ~~~~~~~~~~~~~~L~~~Gi~~~~g~~---------------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
.+++. ...++.+.|.+ |.+.+|.. ..+.+||+++..++++|+++++++|++++++
T Consensus 323 ~~~~~-~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~ 398 (423)
T 3lvm_A 323 SFNYV-EGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGR 398 (423)
T ss_dssp EETTS-CHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EeCCC-CHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 77542 22367777766 55555421 0367999999999999999999999998764
No 33
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.97 E-value=2.1e-30 Score=260.65 Aligned_cols=340 Identities=13% Similarity=0.133 Sum_probs=246.9
Q ss_pred CCCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610 66 GQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATT 145 (430)
Q Consensus 66 ~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~ 145 (430)
...+.+|++..++++.|+.|++++.+.+.+.++...+ .++....+.+.++++++.+++++|++++ +|++ ++|+++
T Consensus 25 ~~~~~~yld~~~~~~~~~~v~~a~~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~-~~g~t~ 99 (416)
T 1qz9_A 25 LPEGVIYLDGNSLGARPVAALARAQAVIAEEWGNGLI---RSWNSAGWRDLSERLGNRLATLIGARDG-EVVV-TDTTSI 99 (416)
T ss_dssp CCTTCEECCTTTSCCCBTTHHHHHHHHHHTCCCCCGG---GHHHHTSGGGHHHHHHHHHHTTTTCCTT-SEEE-CSCHHH
T ss_pred CCCCeEeecCCCcCCCcHHHHHHHHHHHHHHHhccCc---cccchhhHHHHHHHHHHHHHHHcCCCcc-cEEE-eCChhH
Confidence 3456788888888889999999999988642221110 0011112346678999999999999765 7777 488999
Q ss_pred HHHHHHhhcC------CCCCcEEEEeCChhHH---HHHHHHHHh--C-CceEEecCCCCcCCCCCCccccc--cCCCccE
Q 043610 146 QFAAVPLNLC------TPNDPVDYIVTGSWGD---KAFKEAQKF--C-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKY 211 (430)
Q Consensus 146 a~~~~~~sl~------~~gd~vl~~~~g~~~~---~~~~~a~~~--g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~l 211 (430)
++..++..+. ++||+++++..++|+. .+...++.. | +++.++. +++++ +++++++
T Consensus 100 al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-----------~~~l~~~i~~~~~~ 168 (416)
T 1qz9_A 100 NLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS-----------PEELPQAIDQDTAV 168 (416)
T ss_dssp HHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS-----------GGGHHHHCSTTEEE
T ss_pred HHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc-----------HHHHHHHhCCCceE
Confidence 9988888765 8899877777665552 122233344 6 5544432 45665 6788999
Q ss_pred EEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCcc-EEEEEcHHHHhc
Q 043610 212 LHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGV-TIVIVRKDLLGN 284 (430)
Q Consensus 212 v~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~-g~l~v~~~~~~~ 284 (430)
|++++++|+||.+.| +|.++ +++|+++++|++|++|..++++..+ |++++|+||++ +++|+ |++++++++++.
T Consensus 169 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~~~~~~~~ 248 (416)
T 1qz9_A 169 VMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCDL 248 (416)
T ss_dssp EEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTTTTTT
T ss_pred EEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhcCCCEEEecCcccCCCCCCCeEEEEECHHHHhc
Confidence 999999999999999 78886 6889999999999999988777654 79999999998 56677 999999998776
Q ss_pred cCCCCCccc------cccch-----hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc-C-
Q 043610 285 AQDKTPLML------DYKIH-----DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS-N- 351 (430)
Q Consensus 285 ~~~~~p~~~------~~~~~-----~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~-~- 351 (430)
+.+....+. ++... ...+...+|++...++++.++++.+. ..+++++.++++++++++++.|.+. .
T Consensus 249 l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 327 (416)
T 1qz9_A 249 VPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFA-QTDMASLRRKSLALTDLFIELVEQRCAA 327 (416)
T ss_dssp SCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHT-TSCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 544221110 00000 01122457899999999999999765 3589999999999999999999874 3
Q ss_pred -CceecCCCCC-CCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecC-CCCHHHHHHHHHHHHHHHHh
Q 043610 352 -GFYKCPVEKS-VRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYN-AMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 352 -G~~~~~~~~~-~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~-~~t~edv~~ll~~L~~~~~~ 428 (430)
|+++...... .++ .++.|.+++ ..++.+.|.++||.+.. ...+.+||+++. +++++|+++++++|++++++
T Consensus 328 ~g~~~~~~~~~~~~~-~~~~~~~~~---~~~l~~~l~~~gi~~~~--~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~ 401 (416)
T 1qz9_A 328 HELTLVTPREHAKRG-SHVSFEHPE---GYAVIQALIDRGVIGDY--REPRIMRFGFTPLYTTFTEVWDAVQILGEILDR 401 (416)
T ss_dssp SCCEECSCSSGGGBC-SEEEEECTT---HHHHHHHHHTTTEECEE--ETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEeCCCCHHHcC-CEEEEecCC---HHHHHHHHHhCCcEecc--CCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhc
Confidence 7877642111 133 457777763 34799999999988642 124579999984 89999999999999998764
No 34
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.97 E-value=4.8e-31 Score=267.01 Aligned_cols=349 Identities=17% Similarity=0.131 Sum_probs=238.1
Q ss_pred ccCCCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH
Q 043610 64 QSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA 143 (430)
Q Consensus 64 ~~~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga 143 (430)
+....+.+|++..++.++|+.|++++.+.+.+..+.+.+ .+..+..+.+.++++|+.+++++|++++ +|+++ +|+
T Consensus 13 ~~~~~~~~~Ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~-~g~ 87 (432)
T 3a9z_A 13 ESPPNRKVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSS---SYVAGRKAKDIINTARASLAKMIGGKPQ-DIIFT-SGG 87 (432)
T ss_dssp -----CCEECBTTTCCCCCHHHHHHHHHHHHHCCSCTTC---SSHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEE-SCH
T ss_pred cCCCCCcEEeeCCccCCCCHHHHHHHHHHHHHhcCCCcc---CcHHHHHHHHHHHHHHHHHHHHcCCCcC-eEEEe-CCh
Confidence 444556789998888899999999999988653322221 1112345667889999999999999765 67775 789
Q ss_pred HHHHHHHHhhcC--------CCCCcEEEEeCChhH-------------H--HHHHHHHHhC-CceEEecCCCCcCCCCCC
Q 043610 144 TTQFAAVPLNLC--------TPNDPVDYIVTGSWG-------------D--KAFKEAQKFC-NPQVIWSGKAEKYTKIPN 199 (430)
Q Consensus 144 T~a~~~~~~sl~--------~~gd~vl~~~~g~~~-------------~--~~~~~a~~~g-~~~~v~~~~~~~~g~~~d 199 (430)
|++++.++.++. ++||+|++..+++.+ . .|...++..| +++.++..+. .+ .+|
T Consensus 88 t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~--~~-~~d 164 (432)
T 3a9z_A 88 TESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKV--NG-QVE 164 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTT--TS-SCC
T ss_pred HHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcc--cC-CcC
Confidence 999999988875 488877665544322 1 1333344567 7777776421 23 478
Q ss_pred ccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCC----------cEEEEeccCcCCCCccccccc--cEEEeC
Q 043610 200 FDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNST----------GILVADMSSNFCSKPVDVTRF--GVIYAG 262 (430)
Q Consensus 200 ~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g----------~~lvvD~a~s~G~~~idl~~~--d~~~~s 262 (430)
+++|+ +++++++|++++++|+||.+.| +|.++ +++| +++++|++|++|..++++.++ |+++.|
T Consensus 165 ~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~~~d~~~~s 244 (432)
T 3a9z_A 165 VEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIV 244 (432)
T ss_dssp HHHHHHTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHHCCSEEEEE
T ss_pred HHHHHHhccCCceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhhcCCCEEEEe
Confidence 88887 7888999999999999999999 78776 5677 999999999999888777544 789999
Q ss_pred CCccccCCccEEEEEcHHH-HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610 263 AQKNVGPSGVTIVIVRKDL-LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE 341 (430)
Q Consensus 263 ~~K~~gp~G~g~l~v~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~ 341 (430)
+|||+||. +|+++++++. ...+ .+.++++.. ......+|++...++++.++++++.+ +++++.++++++++
T Consensus 245 ~~K~~g~~-~G~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~a~~aal~~~~~--~~~~~~~~~~~~~~ 316 (432)
T 3a9z_A 245 GHKFYGPR-IGALYVRGVGKLTPL---YPMLFGGGQ--ERNFRPGTENTPMIAGLGKAADLVSE--NCETYEAHMRDIRD 316 (432)
T ss_dssp GGGTTCCS-CEEEEETTBTTTBCC---CCSCCSSCG--GGGTSCSCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
T ss_pred hhHhcCCc-ceEEEEccccccCCc---CceeecCCc--cccccCCCcCHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHH
Confidence 99999987 9999999875 3322 233332211 12234578999999999999997753 68999999999999
Q ss_pred HHHHHHHccCCceec--CC-CCCCCccceEEEEcCCCchhH-HHHHHHH----HcCCeecCCC-----------C-----
Q 043610 342 LLYNVIDGSNGFYKC--PV-EKSVRSFMNVPFTLEKSDLEA-EFVKEAA----KEKMVQLKGH-----------R----- 397 (430)
Q Consensus 342 ~l~~~l~~~~G~~~~--~~-~~~~rs~~iv~f~~~~~~~~~-~~~~~L~----~~Gi~~~~g~-----------~----- 397 (430)
++++.|.+..|+.+. .. +...+.+.++.|.+++.+.+. ++.+.|. +.|+.+.+++ +
T Consensus 317 ~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~ 396 (432)
T 3a9z_A 317 YLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDV 396 (432)
T ss_dssp HHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHCSSEECBSSCGGGGGGTTSCCHHHHHTTCCHHH
T ss_pred HHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHhcCeEEeccccccCCCCCCccHHHHhcCCCccc
Confidence 999999874465442 11 112345557778877422223 4555442 1233222210 0
Q ss_pred CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 398 SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 398 ~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
..+++|||++.+++++|+++++++|++++++
T Consensus 397 ~~~~iRis~~~~~t~eei~~~~~~l~~~~~~ 427 (432)
T 3a9z_A 397 ARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQ 427 (432)
T ss_dssp HTTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 1257999999999999999999999998753
No 35
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.96 E-value=3.4e-29 Score=247.64 Aligned_cols=333 Identities=12% Similarity=0.032 Sum_probs=238.7
Q ss_pred CCceeec-CCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHH-HHHHhCCCCCcEEEEEeCcHHHH
Q 043610 69 DRVFNFA-AGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESD-LRALLNIPQEYSVLFLQGGATTQ 146 (430)
Q Consensus 69 ~~~~l~~-~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~-la~l~g~~~~~~vv~~~~gaT~a 146 (430)
+.+|++. .+..++++.|++++.+.+....+.+... .++.+.......+++++. +++++|.+ +++++ +|+|+|
T Consensus 8 ~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~la~~~~~~---~v~~~-~g~t~a 81 (371)
T 2e7j_A 8 DFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCT--TGRLDEIKTPPIHDFIHNQLPKFLGCD---VARVT-NGAREA 81 (371)
T ss_dssp CCEECCHHHHTCCCCHHHHHHHHHC----------------------CCHHHHHHTHHHHHTTSS---EEEEE-SSHHHH
T ss_pred CcEEecccccCCCCCHHHHHHHHHHHhhcccCCccc--cccchhhHHHHHHHHHHHHHHHHcCCC---EEEEe-CChHHH
Confidence 3456655 5567789999999998875432111100 111222334556789999 99999986 56664 789999
Q ss_pred HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEe--cCCCCcCCCCCCccccc--cC-----CCccEEEEee
Q 043610 147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIW--SGKAEKYTKIPNFDALE--QN-----PDAKYLHICA 216 (430)
Q Consensus 147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~--~~~~~~~g~~~d~~~l~--i~-----~~~~lv~i~~ 216 (430)
+..++.+++++||+|++..+++.+... .++..| +++.++ ..+ +..+|+++++ ++ +++++|++++
T Consensus 82 ~~~~~~~~~~~gd~vl~~~~~~~~~~~--~~~~~g~~~~~v~~~~~~----~~~~d~~~l~~~l~~~~~~~~~~~v~~~~ 155 (371)
T 2e7j_A 82 KFAVMHSLAKKDAWVVMDENCHYSSYV--AAERAGLNIALVPKTDYP----DYAITPENFAQTIEETKKRGEVVLALITY 155 (371)
T ss_dssp HHHHHHHHCCTTCEEEEETTCCHHHHH--HHHHTTCEEEEECCCCTT----TCCCCHHHHHHHHHHHTTTSCEEEEEEES
T ss_pred HHHHHHHHhCCCCEEEEccCcchHHHH--HHHHcCCeEEEeecccCC----CCCcCHHHHHHHHHhhcccCCeEEEEEEC
Confidence 999999998999999988888777543 356677 777777 432 2247888887 55 7899999999
Q ss_pred cCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCcccc-CCccEEEEEcHHHHhc-cCCCC
Q 043610 217 NETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVG-PSGVTIVIVRKDLLGN-AQDKT 289 (430)
Q Consensus 217 ~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~g-p~G~g~l~v~~~~~~~-~~~~~ 289 (430)
++|+||.+.| +|.++ +++|+++++|++|+.|..++++..+ |++++|+||+++ |.|+|++++++++++. +.+..
T Consensus 156 ~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~~~~~~~~~~~ 235 (371)
T 2e7j_A 156 PDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSE 235 (371)
T ss_dssp SCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCS
T ss_pred CCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhcCCCEEEecCCcCCCCCCCcEEEEEechhhhhhccccc
Confidence 9999999999 78886 6899999999999999887776654 699999999995 7789999999988776 54322
Q ss_pred CccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHH--HHHHHHHHHHHHccCCceecCCCCCCCccce
Q 043610 290 PLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMN--RKKAELLYNVIDGSNGFYKCPVEKSVRSFMN 367 (430)
Q Consensus 290 p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~--~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~i 367 (430)
..+.. ..+...++++...++++..+++++.+ .+.++. +++++++++.|++. |+++.. ....++ ..
T Consensus 236 ~~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~l~~~L~~~-~~~~~~-~~~~~~-~~ 302 (371)
T 2e7j_A 236 KYKNK-----EVELLGCTARGATIITLMASFPHVRE-----RIKRWDEEVEKARRFAAEMEKL-GIKQLG-DNPHNH-DL 302 (371)
T ss_dssp SCTTS-----BGGGTTCCCCSHHHHHHHHHHHHHHH-----HGGGHHHHHHHHHHHHHHHHHT-TCEEES-SSSCCS-SE
T ss_pred cCccc-----ccccccCCcCHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHc-CcEEec-CCCccC-ce
Confidence 11100 00112468888888888888987652 677788 88999999999974 887763 211133 35
Q ss_pred EEEEcCCCchhHHHHHHHHHcCCeecCC---C----CCCCeeE-EeecCC-CCHHHHHHHHHHHHHHHHhh
Q 043610 368 VPFTLEKSDLEAEFVKEAAKEKMVQLKG---H----RSVGGMR-ASIYNA-MPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 368 v~f~~~~~~~~~~~~~~L~~~Gi~~~~g---~----~~~g~iR-is~~~~-~t~edv~~ll~~L~~~~~~~ 429 (430)
+.+.++ ...++.+.|.++||.+.+. . ...+.+| ++++.+ ++++|+++++++|++++++.
T Consensus 303 ~~~~~~---~~~~~~~~l~~~gi~~~~~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 303 MFFHAE---VLYEISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp EEEECH---HHHHHHHHSSSGGGHHHHHHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEECC---CHHHHHHHHHHCCEEEEeccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence 667765 1236888888889987541 0 1145799 999988 89999999999999998764
No 36
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.96 E-value=9.6e-28 Score=238.55 Aligned_cols=325 Identities=14% Similarity=0.018 Sum_probs=235.9
Q ss_pred ecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhh
Q 043610 74 FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLN 153 (430)
Q Consensus 74 ~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~s 153 (430)
++.+..++++.+++++.+.+....+.. ...+...+..+++++.+++++|++++ +++++ +|+|+++..++..
T Consensus 35 ~~~~~~~~~~~v~~a~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~la~~~~~~~~-~i~~~-~ggt~a~~~~~~~ 105 (397)
T 3f9t_A 35 FGSMCSNVLPITRKIVDIFLETNLGDP-------GLFKGTKLLEEKAVALLGSLLNNKDA-YGHIV-SGGTEANLMALRC 105 (397)
T ss_dssp CSCSCCCCCTHHHHHHHHHTTCCTTSG-------GGBHHHHHHHHHHHHHHHHHTTCTTC-EEEEE-SCHHHHHHHHHHH
T ss_pred EEEecCCCcHHHHHHHHHHHhhcCCCc-------ccChhHHHHHHHHHHHHHHHhCCCCC-CEEEe-cCcHHHHHHHHHH
Confidence 444556677899999998875321110 12346678888999999999999876 77765 7899999999888
Q ss_pred cCCC-------------CCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEee
Q 043610 154 LCTP-------------NDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICA 216 (430)
Q Consensus 154 l~~~-------------gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~ 216 (430)
+..+ ||+|++..+.+.+. ...++..| +++.++..+ . ..+|+++++ +++ ++++|++++
T Consensus 106 ~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~v~~~~---~-~~~d~~~l~~~i~~~~~~~v~~~~ 179 (397)
T 3f9t_A 106 IKNIWREKRRKGLSKNEHPKIIVPITAHFSF--EKGREMMDLEYIYAPIKE---D-YTIDEKFVKDAVEDYDVDGIIGIA 179 (397)
T ss_dssp HHHHHHHHHHTTCCCCSSCEEEEETTCCTHH--HHHHHHHTCEEEEECBCT---T-SSBCHHHHHHHHHHSCCCEEEEEB
T ss_pred HHHHHHhhhhhcccCCCCeEEEECCcchhHH--HHHHHHcCceeEEEeeCC---C-CcCCHHHHHHHHhhcCCeEEEEEC
Confidence 7654 89999887777663 34556678 777787643 2 247888887 666 899999999
Q ss_pred cCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--------------ccccc-cccEEEeCCCccc-cCCccEEEEE
Q 043610 217 NETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--------------PVDVT-RFGVIYAGAQKNV-GPSGVTIVIV 277 (430)
Q Consensus 217 ~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--------------~idl~-~~d~~~~s~~K~~-gp~G~g~l~v 277 (430)
++|+||.+.| +|.++ +++|+++++|++|+.+.. ++++. ..|+++.++||++ ++.++|++++
T Consensus 180 ~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~~~~g~~~~ 259 (397)
T 3f9t_A 180 GTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHCPIPSGGILF 259 (397)
T ss_dssp SCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCCCSSCEEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccccCCeEEEccccccCCCCCceEEEE
Confidence 9999999999 78886 689999999999985533 33333 4579999999999 5778999999
Q ss_pred cHHHH-hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec
Q 043610 278 RKDLL-GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC 356 (430)
Q Consensus 278 ~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~ 356 (430)
+++.+ +.+....+++.. .. .....+|++.....++.++++.+. ..++++..++.+++++++++.|++. |+.++
T Consensus 260 ~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 333 (397)
T 3f9t_A 260 KDIGYKRYLDVDAPYLTE-TR---QATILGTRVGFGGACTYAVLRYLG-REGQRKIVNECMENTLYLYKKLKEN-NFKPV 333 (397)
T ss_dssp SSGGGGGGTCEECTTSSS-SE---ECSSCSSCCSHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHT-TCCBS
T ss_pred eCHHHHHhhccCCccccC-CC---ccccccccccchHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE
Confidence 76643 333221221111 00 111224555455666666676654 3478899999999999999999974 87755
Q ss_pred CCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610 357 PVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 357 ~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~ 427 (430)
. ++ .. ..+.|.+++ ..++.+.|.++||.+.++.. .+++||+++.+++++|+++++++|+++++
T Consensus 334 ~-~~--~~-~~~~~~~~~---~~~~~~~l~~~gi~v~~~~~-~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 334 I-EP--IL-NIVAIEDED---YKEVCKKLRDRGIYVSVCNC-VKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp S-CC--SS-SEEEEECTT---HHHHHHHHHHTTCBCEECSS-SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred c-CC--Cc-cEEEEEeCC---HHHHHHHHHhCCeEEeccCC-CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 3 21 23 356677653 34789999999999876542 46899999999999999999999998764
No 37
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.96 E-value=4e-27 Score=232.56 Aligned_cols=309 Identities=9% Similarity=0.035 Sum_probs=230.1
Q ss_pred CCceeecCC--CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610 69 DRVFNFAAG--PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ 146 (430)
Q Consensus 69 ~~~~l~~~g--p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a 146 (430)
+.+++|+.| |.++++.|++++.+.+.++ ..+ +. ....++|+.+++++|++++ +++++ +|+|++
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----------~~y-~~--~~~~~lr~~la~~~~~~~~-~v~~~-~g~t~a 96 (363)
T 3ffh_A 32 TKITKLSSNENPLGTSKKVAAIQANSSVET----------EIY-PD--GWASSLRKEVADFYQLEEE-ELIFT-AGVDEL 96 (363)
T ss_dssp SCCEECSSCSCTTCCCHHHHHHHHTCBSCC----------CBC-------CHHHHHHHHHHHTCCGG-GEEEE-SSHHHH
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHHHHHh----------hcC-CC--cchHHHHHHHHHHhCCChh-hEEEe-CCHHHH
Confidence 456777665 3567899999998866421 111 11 2346889999999998775 77775 789999
Q ss_pred HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccc
Q 043610 147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGV 223 (430)
Q Consensus 147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~ 223 (430)
++.++.+++++||+|++..+.+.+. ...++..| +++.++..+ +..+|+++++ +++++++|++++++|+||.
T Consensus 97 ~~~~~~~~~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~ 170 (363)
T 3ffh_A 97 IELLTRVLLDTTTNTVMATPTFVQY--RQNALIEGAEVREIPLLQ----DGEHDLEGMLNAIDEKTTIVWICNPNNPTGN 170 (363)
T ss_dssp HHHHHHHHCSTTCEEEEEESSCHHH--HHHHHHHTCEEEEEECCT----TSCCCHHHHHHHCCTTEEEEEEESSCTTTCC
T ss_pred HHHHHHHHccCCCEEEEcCCChHHH--HHHHHHcCCEEEEecCCC----CCCcCHHHHHHhcccCCCEEEEeCCCCCcCC
Confidence 9999999999999999888876653 34566678 888887753 2357888887 7889999999999999999
Q ss_pred cCC--CCccc-cCC--CcEEEEeccCcCCCC---c--ccc-ccc--cEEEeCCCccccCCcc--EEEEEcHHHHhccCCC
Q 043610 224 EFK--EYPSA-KNS--TGILVADMSSNFCSK---P--VDV-TRF--GVIYAGAQKNVGPSGV--TIVIVRKDLLGNAQDK 288 (430)
Q Consensus 224 ~~p--ei~~~-~~~--g~~lvvD~a~s~G~~---~--idl-~~~--d~~~~s~~K~~gp~G~--g~l~v~~~~~~~~~~~ 288 (430)
++| ++.++ +.. |+++++|++|+.+.. + +.. ... .+++.|++|++|++|+ |++++++++++.+.+.
T Consensus 171 ~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~ 250 (363)
T 3ffh_A 171 YIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNIV 250 (363)
T ss_dssp CCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHHT
T ss_pred CcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHHHHHHHHh
Confidence 999 55554 222 999999999883221 1 111 112 2778999999998886 9999999988764321
Q ss_pred CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceE
Q 043610 289 TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV 368 (430)
Q Consensus 289 ~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv 368 (430)
. ..+++|...++++..+|+.. ..++.+.++++++++++++.|++..|+.+.+ . .+ ..+
T Consensus 251 ~--------------~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~-~---~~-~~~ 308 (363)
T 3ffh_A 251 R--------------PPFNTTSIGQKLAIEAIKDQ---AFIGECRTSNANGIKQYEAFAKRFEKVKLYP-A---NG-NFV 308 (363)
T ss_dssp C--------------CSCCCBHHHHHHHHHHHHCH---HHHHHHHHHHHHHHHHHHHHHHHCTTCEECC-C---CS-SEE
T ss_pred C--------------CCCCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHhhCCCceECC-C---CC-eEE
Confidence 1 12467888888888888742 2578899999999999999999757887753 1 23 345
Q ss_pred EEEcCCCchhHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610 369 PFTLEKSDLEAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDF 425 (430)
Q Consensus 369 ~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~ 425 (430)
.+.++. ...++.+.|.++||.+.+|.. ..+++|||++ +++|+++++++|+++
T Consensus 309 ~~~~~~--~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 309 LIDLGI--EAGTIFSYLEKNGYITRSGAALGFPTAVRITIG---KEEDNSAVIALLEKL 362 (363)
T ss_dssp EEECSS--CHHHHHHHHHHTTEECEETTTTTCTTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred EEECCC--CHHHHHHHHHHCCeEEEeCccCCCCCeEEEECC---CHHHHHHHHHHHHHh
Confidence 677763 234799999999999877643 2568999987 899999999999876
No 38
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.96 E-value=8.9e-27 Score=229.14 Aligned_cols=312 Identities=10% Similarity=0.005 Sum_probs=232.7
Q ss_pred CCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610 68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATT 145 (430)
Q Consensus 68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~ 145 (430)
.+.+++|+.|. .++++.|++++.+.+.+. .++.. ....++|+.+++++|++++ +++++ +|+++
T Consensus 15 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----------~~y~~---~~~~~l~~~la~~~~~~~~-~i~~~-~g~~~ 79 (354)
T 3ly1_A 15 TDNPIRINFNENPLGMSPKAQAAARDAVVKA----------NRYAK---NEILMLGNKLAAHHQVEAP-SILLT-AGSSE 79 (354)
T ss_dssp SSSCEECSSCCCSSCCCHHHHHHHHHTGGGT----------TSCCH---HHHHHHHHHHHHHTTSCGG-GEEEE-SHHHH
T ss_pred CCceEEccCCCCCCCCCHHHHHHHHHHHhhC----------cCCCC---CchHHHHHHHHHHhCCChH-HEEEe-CChHH
Confidence 45566666653 567899999999877531 12222 2456899999999999765 77775 89999
Q ss_pred HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC--CCccEEEEeecCCC
Q 043610 146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN--PDAKYLHICANETI 220 (430)
Q Consensus 146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~--~~~~lv~i~~~~t~ 220 (430)
+++.++..++++||+|++..+.+.+. ...++..| +++.++..+ +..+|+++++ ++ +++++|++++++|+
T Consensus 80 a~~~~~~~l~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~~~~~~----~~~~d~~~l~~~l~~~~~~~~v~l~~p~np 153 (354)
T 3ly1_A 80 GIRAAIEAYASLEAQLVIPELTYGDG--EHFAKIAGMKVTKVKMLD----NWAFDIEGLKAAVAAYSGPSIVYLVNPNNP 153 (354)
T ss_dssp HHHHHHHHHCCTTCEEEEESSSCTHH--HHHHHHTTCEEEEECCCT----TSCCCHHHHHHHHHTCSSCEEEEEESSCTT
T ss_pred HHHHHHHHHhCCCCeEEECCCCchHH--HHHHHHcCCEEEEecCCC----CCCCCHHHHHHHhccCCCCCEEEEeCCCCC
Confidence 99999999999999999887776654 34566778 777777643 2357888887 65 89999999999999
Q ss_pred ccccCC--CCccc---cCCCcEEEEeccCcCCCCc------cc-cc---cccEEEeCCCccccCCc--cEEEEEcHHHHh
Q 043610 221 HGVEFK--EYPSA---KNSTGILVADMSSNFCSKP------VD-VT---RFGVIYAGAQKNVGPSG--VTIVIVRKDLLG 283 (430)
Q Consensus 221 tG~~~p--ei~~~---~~~g~~lvvD~a~s~G~~~------id-l~---~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~ 283 (430)
||.++| ++.++ .++|+++++|++|+..... +. +. +.++++.|++|++|++| +|++++++++++
T Consensus 154 tG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~ 233 (354)
T 3ly1_A 154 TGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIA 233 (354)
T ss_dssp TCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHH
T ss_pred cCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHH
Confidence 999999 55554 2589999999998743321 11 12 22388999999999767 799999998877
Q ss_pred ccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCC
Q 043610 284 NAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVR 363 (430)
Q Consensus 284 ~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~r 363 (430)
.+.... ..+++|...++++..+|+.. ..++.++++++++++++++.|.+ .|+.+.+ + .
T Consensus 234 ~~~~~~--------------~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~--~--~ 291 (354)
T 3ly1_A 234 LMGRYV--------------AGEKINFSGVDAALASMNDS---AFITYSKKSNDVSRQILLKALED-LKLPYLP--S--E 291 (354)
T ss_dssp HHGGGT--------------TCSCCCHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHHHHHHHH-HTCCBCC--C--C
T ss_pred HHHHhc--------------CCCCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHH-CCCeECC--C--C
Confidence 653211 12577888888888888743 25788999999999999999987 4776543 1 2
Q ss_pred ccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 364 SFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 364 s~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
+ ..+.+.+++ ...++.+.|.++||.+. |.. ..+++|||++ +++|+++++++|+++++++
T Consensus 292 ~-~~~~~~~~~--~~~~~~~~l~~~gi~v~-g~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l~~~ 352 (354)
T 3ly1_A 292 G-NFVFHQLVV--PLKDYQTHMADAGVLIG-RAFPPADNWCRISLG---TPQEMQWVADTMREFRKKS 352 (354)
T ss_dssp S-SEEEEECSS--CHHHHHHHHHHTTEECC-CCCTTCTTEEEEECC---CHHHHHHHHHHHHHHHHTT
T ss_pred c-eEEEEECCC--CHHHHHHHHHHCCEEEe-ecCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHHhh
Confidence 3 345677764 23479999999999977 432 3468999986 7999999999999998764
No 39
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.95 E-value=5e-27 Score=232.07 Aligned_cols=310 Identities=11% Similarity=0.043 Sum_probs=229.2
Q ss_pred CCceeecCC--CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610 69 DRVFNFAAG--PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ 146 (430)
Q Consensus 69 ~~~~l~~~g--p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a 146 (430)
+.+++|+.| |.++++.|++++.+.+......+ ... ..++|+.+++++|++++ +|+++ +|++++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~---------~~~----~~~lr~~la~~~~~~~~-~v~~~-~g~~~a 94 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQNANKAHLYP---------DDS----MIELKSTLAQKYKVQNE-NIIIG-AGSDQV 94 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHHGGGTTSCC---------CTT----CHHHHHHHHHHHTCCGG-GEEEE-SSHHHH
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHhhccCC---------CCC----hHHHHHHHHHHhCCCcc-eEEEC-CCHHHH
Confidence 456666654 45678999999998875321111 011 13788999999998765 77775 789999
Q ss_pred HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccc
Q 043610 147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGV 223 (430)
Q Consensus 147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~ 223 (430)
++.++.+++++||+|++..+.+.+. ...++..| +++.++. .+ .+. +|+++++ +++++++|++++++|+||.
T Consensus 95 ~~~~~~~l~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~v~~-~~--~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~ 168 (365)
T 3get_A 95 IEFAIHSKLNSKNAFLQAGVTFAMY--EIYAKQCGAKCYKTQS-IT--HNL-DEFKKLYETHKDEIKLIFLCLPNNPLGE 168 (365)
T ss_dssp HHHHHHHHCCTTCEEEECSSCCTHH--HHHHHHHTCEEEECSS-SS--CCH-HHHHHHHHHTTTTEEEEEEESSCTTTCC
T ss_pred HHHHHHHHhCCCCEEEEeCCChHHH--HHHHHHcCCEEEEEec-CC--CCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCC
Confidence 9999999999999999877766653 34566677 7777766 11 234 7888887 7889999999999999999
Q ss_pred cCC--CCccc---cCCCcEEEEeccCc------CCCCccccc------cccEEEeCCCccccCCc--cEEEEEcHHHHhc
Q 043610 224 EFK--EYPSA---KNSTGILVADMSSN------FCSKPVDVT------RFGVIYAGAQKNVGPSG--VTIVIVRKDLLGN 284 (430)
Q Consensus 224 ~~p--ei~~~---~~~g~~lvvD~a~s------~G~~~idl~------~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~ 284 (430)
++| ++.++ .++|+++++|++|+ .+..+.+.. ..++++.|++|++|++| +|++++++++++.
T Consensus 169 ~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 248 (365)
T 3get_A 169 CLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISA 248 (365)
T ss_dssp CCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHH
T ss_pred CcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHHHHH
Confidence 999 55554 36799999999988 333333321 12388899999998767 8999999988776
Q ss_pred cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610 285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS 364 (430)
Q Consensus 285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs 364 (430)
+... ...+++|...++++..+|+.. ..++.++++++++++++++.|.+ .|+.+.+ + .+
T Consensus 249 ~~~~--------------~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~--~--~~ 306 (365)
T 3get_A 249 FYKL--------------RAPFNVSNLALKAAVAAMDDD---EFTEKTLENNFSQMELYKEFAKK-HNIKIID--S--YT 306 (365)
T ss_dssp HHHH--------------SCTTCSCHHHHHHHHHHHTCH---HHHHHHHHHHHHHHHHHHHHHHH-TTCEECC--C--SS
T ss_pred HHHh--------------cCCCCcCHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHHHHHh-CCCEECC--C--CC
Confidence 4320 011357888888888888742 25788999999999999999997 4887653 1 23
Q ss_pred cceEEEEcCCCchhHHHHHHHHHcCCeecCCCCC-CCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610 365 FMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRS-VGGMRASIYNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 365 ~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~-~g~iRis~~~~~t~edv~~ll~~L~~~~ 426 (430)
..+.+.+++. ...++.+.|.++||.+.+|... .+++|||++ +++|+++++++|++++
T Consensus 307 -~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~~~~iRis~~---~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 307 -NFITYFFDEK-NSTDLSEKLLKKGIIIRNLKSYGLNAIRITIG---TSYENEKFFTEFDKIL 364 (365)
T ss_dssp -SEEEEECSSS-CHHHHHHHHHTTTEECEECGGGTCSEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred -eEEEEECCCC-CHHHHHHHHHHCCEEEEECccCCCCEEEEEcC---CHHHHHHHHHHHHHHh
Confidence 2356777742 2337999999999998776422 468999987 8999999999999876
No 40
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.95 E-value=2.7e-26 Score=228.70 Aligned_cols=328 Identities=13% Similarity=0.114 Sum_probs=227.8
Q ss_pred CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcE-EEEEeCcHH
Q 043610 70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYS-VLFLQGGAT 144 (430)
Q Consensus 70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~-vv~~~~gaT 144 (430)
.++.|+.|- .+.++.+++++.+.+.+. ...|.. .....+..+.+.+.+++.+|. +++ + ++++ +|++
T Consensus 27 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----~~~y~~---~~g~~~l~~~la~~~~~~~g~~~~~~-~~v~~~-~g~~ 97 (389)
T 1gd9_A 27 DVISLGIGEPDFDTPQHIKEYAKEALDKG----LTHYGP---NIGLLELREAIAEKLKKQNGIEADPK-TEIMVL-LGAN 97 (389)
T ss_dssp SCEECCCCSCSSCCCHHHHHHHHHHHHTT----CCSCCC---TTCCHHHHHHHHHHHHHHHCCCCCTT-TSEEEE-SSTT
T ss_pred CeEecCCCCCCCCCCHHHHHHHHHHHhCC----CCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCCC-CeEEEc-CChH
Confidence 455555543 246889999998887541 111111 111233334444445454584 454 6 7765 7899
Q ss_pred HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610 145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH 221 (430)
Q Consensus 145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t 221 (430)
+++..++.+++++||+|++..+++.+.. ..++..| +++.++...+ .+..+|+++++ +++++++|++++++|+|
T Consensus 98 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~npt 173 (389)
T 1gd9_A 98 QAFLMGLSAFLKDGEEVLIPTPAFVSYA--PAVILAGGKPVEVPTYEE--DEFRLNVDELKKYVTDKTRALIINSPCNPT 173 (389)
T ss_dssp HHHHHHHTTTCCTTCEEEEEESCCTTHH--HHHHHHTCEEEEEECCGG--GTTCCCHHHHHHHCCTTEEEEEEESSCTTT
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCchhHH--HHHHHCCCEEEEeccCCc--cCCCCCHHHHHHhcCcCceEEEEECCCCCC
Confidence 9999999999899999999888877743 4456677 7777776431 22346888887 67789999999999999
Q ss_pred cccCC-----CCccc-cCCCcEEEEeccCcCCCC----ccccc------cccEEEeCCCccccCCc--cEEEEEcHHHHh
Q 043610 222 GVEFK-----EYPSA-KNSTGILVADMSSNFCSK----PVDVT------RFGVIYAGAQKNVGPSG--VTIVIVRKDLLG 283 (430)
Q Consensus 222 G~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~----~idl~------~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~ 283 (430)
|.+++ +|.++ +++|+++++|++|+.+.. +..+. ..|+++.|+||++|++| +|++++++++++
T Consensus 174 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 253 (389)
T 1gd9_A 174 GAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIE 253 (389)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHH
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHHHH
Confidence 99997 34554 589999999999986643 22222 23689999999999888 799999998877
Q ss_pred ccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCC
Q 043610 284 NAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVR 363 (430)
Q Consensus 284 ~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~r 363 (430)
.+... .....++++...++++..+|+......+++.+.++++++++++.+.|++ .|+++.. + .
T Consensus 254 ~l~~~------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~ 316 (389)
T 1gd9_A 254 RMVKF------------QMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNE-MGLPTVK--P--K 316 (389)
T ss_dssp HHHHH------------HTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCCCC--C--C
T ss_pred HHHHH------------HhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHH-cCCeecC--C--C
Confidence 64220 0012246677888888888875332125788899999999999999997 4876643 1 1
Q ss_pred ccceEEEEcCCCchhH-HHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 364 SFMNVPFTLEKSDLEA-EFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 364 s~~iv~f~~~~~~~~~-~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
....+.+.+++.+.+. ++.+.|. ++||.+.+|.. ..+++|||++. ++++++++++.|++++++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~--~~~~i~~~l~~l~~~~~~~ 386 (389)
T 1gd9_A 317 GAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT--AYEKLEEAMDRMERVLKER 386 (389)
T ss_dssp BTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS--CHHHHHHHHHHHHHHHHHT
T ss_pred eeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhc
Confidence 2333445665211233 7888887 88999876532 14579999985 8999999999999988754
No 41
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.95 E-value=8.3e-27 Score=232.11 Aligned_cols=329 Identities=11% Similarity=0.020 Sum_probs=233.2
Q ss_pred CCCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCc
Q 043610 67 QEDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGG 142 (430)
Q Consensus 67 ~~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~g 142 (430)
..+++++|..|. .+.++.|++++.+.+.+. ..+++....+..+++++.+++.+| ++++ +|+++ +|
T Consensus 25 ~g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~---------~~~y~~~~~~l~~~la~~l~~~~g~~~~~~-~i~~~-~g 93 (391)
T 3dzz_A 25 LKEKELPMWIAEMDFKIAPEIMASMEEKLKVA---------AFGYESVPAEYYKAVADWEEIEHRARPKED-WCVFA-SG 93 (391)
T ss_dssp CCTTCEECCSSCCSSCCCHHHHHHHHHHHTTC---------CCCCBCCCHHHHHHHHHHHHHHHSCCCCGG-GEEEE-SC
T ss_pred cCCCceeccccCCCCCCCHHHHHHHHHHHhcC---------cCCCCCCCHHHHHHHHHHHHHHhCCCCCHH-HEEEC-CC
Confidence 345677777664 467899999999887531 111111234666788888999988 4454 67664 78
Q ss_pred HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEeecC
Q 043610 143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHICANE 218 (430)
Q Consensus 143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~~~~ 218 (430)
++++++.++.+++++||+|++..+.+.+. ...++..| +++.++...+ +....+|+++++ ++ +++++|++++++
T Consensus 94 ~~~a~~~~~~~l~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~~v~i~~p~ 170 (391)
T 3dzz_A 94 VVPAISAMVRQFTSPGDQILVQEPVYNMF--YSVIEGNGRRVISSDLIYE-NSKYSVNWADLEEKLATPSVRMMVFCNPH 170 (391)
T ss_dssp HHHHHHHHHHHHSCTTCEEEECSSCCHHH--HHHHHHTTCEEEECCCEEE-TTEEECCHHHHHHHHTSTTEEEEEEESSB
T ss_pred HHHHHHHHHHHhCCCCCeEEECCCCcHHH--HHHHHHcCCEEEEeeeeec-CCceeecHHHHHHHHhccCceEEEEECCC
Confidence 99999999999999999999877776653 34566677 7776665311 011136888887 65 789999999999
Q ss_pred CCccccCC-----CCccc-cCCCcEEEEeccCcCCC----Ccccccc-----cc--EEEeCCCccccCCc--cEEEEEc-
Q 043610 219 TIHGVEFK-----EYPSA-KNSTGILVADMSSNFCS----KPVDVTR-----FG--VIYAGAQKNVGPSG--VTIVIVR- 278 (430)
Q Consensus 219 t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~----~~idl~~-----~d--~~~~s~~K~~gp~G--~g~l~v~- 278 (430)
|+||.+++ +|.++ +++|+++++|++|+.+. .+.++.. .| +++.|+||++|++| +|+++++
T Consensus 171 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~ 250 (391)
T 3dzz_A 171 NPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPN 250 (391)
T ss_dssp TTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCS
T ss_pred CCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECC
Confidence 99999987 35554 58999999999987532 2233322 35 88999999998667 8999997
Q ss_pred HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-cCCceecC
Q 043610 279 KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-SNGFYKCP 357 (430)
Q Consensus 279 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~~~ 357 (430)
+++++.+... . . ....++++...+.++..+++... ..++.+.++++++++++++.|++ ..|+.+..
T Consensus 251 ~~~~~~~~~~-------~---~-~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 317 (391)
T 3dzz_A 251 PDLRARAEES-------F---F-LAGIGEPNLLAIPAAIAAYEEGH--DWLRELKQVLRDNFAYAREFLAKEVPEVKVLD 317 (391)
T ss_dssp HHHHHHHHHH-------H---H-HHTCSSCCTTHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHHCTTSEECC
T ss_pred HHHHHHHHHH-------H---H-hhccCCCCHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHHHHhhCCCcEEec
Confidence 7777654210 0 0 01124567777888888887532 24788999999999999999997 55887753
Q ss_pred CCCCCCccceEEEEcCCCchhH-HHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 358 VEKSVRSFMNVPFTLEKSDLEA-EFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 358 ~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
+ .....+.+.++..+.+. ++.++|. ++||.+.+|.. ..+++|||++ +++++++++++.|++++++
T Consensus 318 --~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l~~ 388 (391)
T 3dzz_A 318 --S--NASYLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA--CPKELVIDGMQRLKQGVLN 388 (391)
T ss_dssp --C--CBSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC--SCHHHHHHHHHHHHHHHHT
T ss_pred --c--CceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 1 12334446666322233 7999984 88999877642 2367999998 5899999999999998875
No 42
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.95 E-value=3.6e-26 Score=233.25 Aligned_cols=330 Identities=13% Similarity=-0.045 Sum_probs=229.1
Q ss_pred CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCc----EEEEEeCcHHHHHHHHHhhc
Q 043610 79 ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEY----SVLFLQGGATTQFAAVPLNL 154 (430)
Q Consensus 79 ~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~----~vv~~~~gaT~a~~~~~~sl 154 (430)
++.++.+.+++.+.+.... . ....++...++.+++++.+++++|.+.+. .+++ ++|+|+++..++.++
T Consensus 52 ~~~~~~v~e~~~~a~~~~~---~----~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~-t~ggtea~~~al~a~ 123 (452)
T 2dgk_A 52 TWDDENVHKLMDLSINKNW---I----DKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTN-TIGSSEACMLGGMAM 123 (452)
T ss_dssp CCCCHHHHHHHHHTTTCBT---T----CTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEE-ESSHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHhccCC---C----ChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEE-eCCHHHHHHHHHHHH
Confidence 3566788888887764211 0 11235777888899999999999998652 3565 588999999888776
Q ss_pred CC--------CC-----CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecC
Q 043610 155 CT--------PN-----DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANE 218 (430)
Q Consensus 155 ~~--------~g-----d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~ 218 (430)
.. +| ++|++.. .+++ +...++..| +++.++..+ + +..+|+++|+ +++++++|++++++
T Consensus 124 ~~~~~~~~~~~G~~~~~~~vi~~~-~h~~--~~~~~~~~G~~v~~v~~~~--~-~~~~d~~~l~~~i~~~t~~v~~~~~~ 197 (452)
T 2dgk_A 124 KWRWRKRMEAAGKPTDKPNLVCGP-VQIC--WHKFARYWDVELREIPMRP--G-QLFMDPKRMIEACDENTIGVVPTFGV 197 (452)
T ss_dssp HHHHHHHHHHTTCCCSCCEEEESS-CCHH--HHHHHHHTTCEEEECCCBT--T-BCSCCHHHHHHHCCTTEEEEECBBSC
T ss_pred HHHHHHHHHhcCCCCCCcEEEECC-CcHH--HHHHHHHcCceEEEEecCC--C-CCeECHHHHHHHHhhCCEEEEEEcCC
Confidence 42 44 4666544 4433 344566678 777777642 1 2357889987 78899999999999
Q ss_pred CCccccCC--CCccc-cC------CCcEEEEeccCcCCCC-------cccc--ccccEEEeCCCccc-cCCccEEEEEcH
Q 043610 219 TIHGVEFK--EYPSA-KN------STGILVADMSSNFCSK-------PVDV--TRFGVIYAGAQKNV-GPSGVTIVIVRK 279 (430)
Q Consensus 219 t~tG~~~p--ei~~~-~~------~g~~lvvD~a~s~G~~-------~idl--~~~d~~~~s~~K~~-gp~G~g~l~v~~ 279 (430)
|+||.+.| +|.++ ++ +|++++||++|+.+.. +.++ ...|++++++|||+ +|.|+|++++++
T Consensus 198 n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~~~~~~ 277 (452)
T 2dgk_A 198 TYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRD 277 (452)
T ss_dssp TTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESS
T ss_pred cCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEEEEEcC
Confidence 99999999 78886 45 4999999999986543 2333 24578999999999 599999999975
Q ss_pred H-HH-hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecC
Q 043610 280 D-LL-GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCP 357 (430)
Q Consensus 280 ~-~~-~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~ 357 (430)
+ .+ +.+. ..+.|+... .......++.+.....++..+++.+.. .|++++.+++.++++++.++|.+..|++++.
T Consensus 278 ~~~~~~~~~-~~~~~~~~~--~~~~~~~~~r~~~~~~~~~aal~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 353 (452)
T 2dgk_A 278 EEALPQELV-FNVDYLGGQ--IGTFAINFSRPAGQVIAQYYEFLRLGR-EGYTKVQNASYQVAAYLADEIAKLGPYEFIC 353 (452)
T ss_dssp GGGSCGGGC-EEECCTTCC--EEECCSCCSCBCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred HHHHHHHhc-cCccccCCC--CCCcccCCCChhHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEEec
Confidence 4 33 3321 112232110 001112345555555666666776553 4789999999999999999999755688763
Q ss_pred CC-CCCCccceEEEEcCCCc---hh-HHHHHHHHHcCCeec----CCCC-CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610 358 VE-KSVRSFMNVPFTLEKSD---LE-AEFVKEAAKEKMVQL----KGHR-SVGGMRASIYNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 358 ~~-~~~rs~~iv~f~~~~~~---~~-~~~~~~L~~~Gi~~~----~g~~-~~g~iRis~~~~~t~edv~~ll~~L~~~~~ 427 (430)
.. +.... .+++|.+++.. .+ .++.++|.++||.+. ++.. ..+.+|||++.++|++|++++++.|+++++
T Consensus 354 ~~~~~~~~-~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~ 432 (452)
T 2dgk_A 354 TGRPDEGI-PAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLK 432 (452)
T ss_dssp ECCTTTBS-SEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCe-EEEEEEecCcccccCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 11 11233 57888887421 23 479999999998632 2211 134799999999999999999999998765
No 43
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.95 E-value=3.5e-26 Score=226.13 Aligned_cols=311 Identities=13% Similarity=0.058 Sum_probs=227.4
Q ss_pred CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEeCcHHH
Q 043610 69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI-PQEYSVLFLQGGATT 145 (430)
Q Consensus 69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~-~~~~~vv~~~~gaT~ 145 (430)
+++++|+.|. .++|+.|++++.+.+.+.... .+... ...++|+.+++++|+ +++ +|+++ +|+|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~--------~y~~~---~~~~l~~~la~~~g~~~~~-~i~~~-~g~t~ 96 (367)
T 3euc_A 30 HGLVKLDAMENPYRLPPALRSELAARLGEVALN--------RYPVP---SSEALRAKLKEVMQVPAGM-EVLLG-NGSDE 96 (367)
T ss_dssp TTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTT--------CSCCC---CHHHHHHHHHHHHTCCTTC-EEEEE-EHHHH
T ss_pred CCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhh--------cCCCC---cHHHHHHHHHHHhCCCCcc-eEEEc-CCHHH
Confidence 4566666654 557899999999887632111 11111 245888999999999 444 77765 78999
Q ss_pred HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCc
Q 043610 146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIH 221 (430)
Q Consensus 146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~t 221 (430)
+++.++.+++++||+|++..+.+.+.. ..++..| +++.++..+ +..+|+++++ +++ ++++|++++++|+|
T Consensus 97 a~~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~l~~~~~~~v~~~~~~npt 170 (367)
T 3euc_A 97 IISMLALAAARPGAKVMAPVPGFVMYA--MSAQFAGLEFVGVPLRA----DFTLDRGAMLAAMAEHQPAIVYLAYPNNPT 170 (367)
T ss_dssp HHHHHHHHTCCTTCEEEEEESCSCCSC--HHHHTTTCEEEEEECCT----TSCCCHHHHHHHHHHHCCSEEEEESSCTTT
T ss_pred HHHHHHHHHcCCCCEEEEcCCCHHHHH--HHHHHcCCeEEEecCCC----CCCCCHHHHHHHhhccCCCEEEEcCCCCCC
Confidence 999999999999999998887776532 3455677 777787753 2247888887 666 89999999999999
Q ss_pred cccCC--C---Cccc-cCC--CcEEEEeccCcCCCC-c--cccccc--cEEEeCCCccccCCc--cEEEEEcHHHHhccC
Q 043610 222 GVEFK--E---YPSA-KNS--TGILVADMSSNFCSK-P--VDVTRF--GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQ 286 (430)
Q Consensus 222 G~~~p--e---i~~~-~~~--g~~lvvD~a~s~G~~-~--idl~~~--d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~ 286 (430)
|.+++ + |.++ +++ |+++++|++|+.... . ..+... ++++.|++|+ +++| +|++++++++++.+.
T Consensus 171 G~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~~~~~~~ 249 (367)
T 3euc_A 171 GNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGDPQWLEQLD 249 (367)
T ss_dssp CCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCT-TSCSCCEEEEEECHHHHHHHG
T ss_pred CCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhh-cccccCceeeeeCHHHHHHHH
Confidence 99998 3 4443 578 999999999763221 1 122223 3788999999 7666 799999998877643
Q ss_pred CCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccc
Q 043610 287 DKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFM 366 (430)
Q Consensus 287 ~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~ 366 (430)
.. ...+++|...++++..+|+. . ..++.+.++++++++++.+.|++..|+.+.+ + .+ .
T Consensus 250 ~~--------------~~~~~~~~~~~~a~~~~l~~-~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~--~--~~-~ 307 (367)
T 3euc_A 250 KV--------------RPPYNVNVLTEATALFALEH-V--AVLDEQAAQLRAERSRVAEGMAAHGGVTVFP--S--AA-N 307 (367)
T ss_dssp GG--------------CCSSCCCHHHHHHHHHHHTT-H--HHHHHHHHHHHHHHHHHHHHHHTSTTCEECC--C--SS-S
T ss_pred Hh--------------CCCCCCCHHHHHHHHHHhcC-H--HHHHHHHHHHHHHHHHHHHHHHhCCCcEECC--C--CC-e
Confidence 21 11246788888888888875 2 2578899999999999999999755887543 1 23 3
Q ss_pred eEEEEcCCCchhHHHHHHHHHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610 367 NVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 367 iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~ 427 (430)
.+.+.+++ ..++.+.|.++||.+.+|.. ..+++|||++ +++|+++++++|+++++
T Consensus 308 ~~~~~~~~---~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 308 FLLARVPD---AAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS---TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp EEEEECSC---HHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred EEEEECCC---HHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC---CHHHHHHHHHHHHHHhc
Confidence 45566651 33788899999999876542 2468999987 89999999999998764
No 44
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.95 E-value=1.5e-26 Score=231.38 Aligned_cols=322 Identities=12% Similarity=0.049 Sum_probs=228.3
Q ss_pred CCCceeecCCC--C-CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610 68 EDRVFNFAAGP--A-NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT 144 (430)
Q Consensus 68 ~~~~~l~~~gp--~-~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT 144 (430)
.+.+++|+.|- . +.++.+++++.+.+.++. .+...+ .......+..+++++.+++++|.+ +++++ +|++
T Consensus 42 g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~~~~---~~~~g~~~~~~~l~~~la~~~g~~---~v~~~-~ggt 113 (398)
T 3a2b_A 42 GRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYG-TGCAGS---RFLNGTLDIHVELEEKLSAYVGKE---AAILF-STGF 113 (398)
T ss_dssp TEEEEECSCSCTTCGGGCHHHHHHHHHHHHHHC-SCCCSB---TTTTCCCHHHHHHHHHHHHHHTCS---EEEEE-SSHH
T ss_pred CceEEEeecccccCCCCCHHHHHHHHHHHHHcC-CCCCCc---CcccCCcHHHHHHHHHHHHHhCCC---cEEEE-CCHH
Confidence 34567777763 2 278899999998886532 111111 001112355678999999999973 67775 7899
Q ss_pred HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC----CccEEEEeec
Q 043610 145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP----DAKYLHICAN 217 (430)
Q Consensus 145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~----~~~lv~i~~~ 217 (430)
+++..++..++++||+|++..+.|.+.. ..++..| +++.++. +|+++++ +++ ++++|+++++
T Consensus 114 ~a~~~~~~~~~~~gd~V~~~~p~~~~~~--~~~~~~g~~~~~v~~---------~d~~~l~~~l~~~~~~~~~~v~~~~~ 182 (398)
T 3a2b_A 114 QSNLGPLSCLMGRNDYILLDERDHASII--DGSRLSFSKVIKYGH---------NNMEDLRAKLSRLPEDSAKLICTDGI 182 (398)
T ss_dssp HHHHHHHHHSSCTTCEEEEETTCCHHHH--HHHHHSSSEEEEECT---------TCHHHHHHHHHTSCSSSCEEEEEESB
T ss_pred HHHHHHHHHHhCCCCEEEECCccCHHHH--HHHHHcCCceEEeCC---------CCHHHHHHHHHhhccCCceEEEEeCC
Confidence 9999999999999999987776665542 3455567 6555543 4566666 433 7899999999
Q ss_pred CCCccccCC--CCccc-cCCCcEEEEeccCcCCCC---cccc------cc-ccEEEeCCCccccCCccEEEEEcHHHHhc
Q 043610 218 ETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK---PVDV------TR-FGVIYAGAQKNVGPSGVTIVIVRKDLLGN 284 (430)
Q Consensus 218 ~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~---~idl------~~-~d~~~~s~~K~~gp~G~g~l~v~~~~~~~ 284 (430)
+|+||.+.| +|.++ +++|+++++|++|+.+.. ..++ .+ .|+++.|+||++||+| |++++++++++.
T Consensus 183 ~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G-G~~~~~~~~~~~ 261 (398)
T 3a2b_A 183 FSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG-GFVAGDADVIDF 261 (398)
T ss_dssp CTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC-EEEEECHHHHHH
T ss_pred CCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC-cEEEeCHHHHHH
Confidence 999999999 78886 688999999999986642 1111 12 3799999999999999 999999988776
Q ss_pred cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610 285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS 364 (430)
Q Consensus 285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs 364 (430)
+..... .+ ...++++.....++..+|+.+. .++.+.++++++++++++.|++ .|+++.+ + .+
T Consensus 262 l~~~~~---~~-------~~~~~~~~~~~a~~~~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~g 323 (398)
T 3a2b_A 262 LKHNAR---SV-------MFSASMTPASVASTLKALEIIQ---NEPEHIEKLWKNTDYAKAQLLD-HGFDLGA--T--ES 323 (398)
T ss_dssp HHHHCH---HH-------HSSBCCCHHHHHHHHHHHHHHH---HCTHHHHHHHHHHHHHHHHHHH-TTCCBCS--C--CS
T ss_pred HHHhcc---cc-------eecCCCCHHHHHHHHHHHHHHh---hCHHHHHHHHHHHHHHHHHHHh-cCCCcCC--C--CC
Confidence 432110 00 0113444444445667887653 2467889999999999999997 5876643 2 23
Q ss_pred cceEEEEcCCCchhH-HHHHHHHHcCCeecCCCCC-----CCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 365 FMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHRS-----VGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 365 ~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~~-----~g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
..+.+.+++ +.+. ++.+.|.++||.+.+|... .+++||+++.+++++|+++++++|++++++.
T Consensus 324 -~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 324 -PILPIFIRS-NEKTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp -SEEEEECCC-HHHHHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred -CEEEEEcCC-HHHHHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 356677764 2333 7889998889998765321 3579999999999999999999999988753
No 45
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.95 E-value=1.8e-26 Score=229.63 Aligned_cols=324 Identities=11% Similarity=0.057 Sum_probs=229.6
Q ss_pred CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCcHH
Q 043610 69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGGAT 144 (430)
Q Consensus 69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~gaT 144 (430)
+.+++|+.|. .+.|+.|++++.+.+.+ +. .+++....+..+++++.+++++| ++++ +++++ +|+|
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~----~~-----~~y~~~~~~~~~~l~~~l~~~~g~~~~~~-~v~~~-~g~~ 100 (391)
T 4dq6_A 32 NDLLPMWVADMDFKAAPCIIDSLKNRLEQ----EI-----YGYTTRPDSYNESIVNWLYRRHNWKIKSE-WLIYS-PGVI 100 (391)
T ss_dssp SCSEECCSSSCSSCCCHHHHHHHHHHHTT----CC-----CCCBCCCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SCHH
T ss_pred CCceeccccCCCCCCCHHHHHHHHHHHhC----CC-----CCCCCCCHHHHHHHHHHHHHHhCCCCcHH-HeEEc-CChH
Confidence 4556666554 46789999999988753 11 11111224667789999999999 5554 67765 7899
Q ss_pred HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecC-CCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610 145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSG-KAEKYTKIPNFDALE--QNPDAKYLHICANETI 220 (430)
Q Consensus 145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~-~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~ 220 (430)
++++.++..++++||+|++..+++.+.. ..++..| +++.++.. .. +....+|+++++ +++ +++|++++++|+
T Consensus 101 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~-~~~~~~d~~~l~~~l~~-~~~v~i~~p~np 176 (391)
T 4dq6_A 101 PAISLLINELTKANDKIMIQEPVYSPFN--SVVKNNNRELIISPLQKLE-NGNYIMDYEDIENKIKD-VKLFILCNPHNP 176 (391)
T ss_dssp HHHHHHHHHHSCTTCEEEECSSCCTHHH--HHHHHTTCEEEECCCEECT-TSCEECCHHHHHHHCTT-EEEEEEESSBTT
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCHHHH--HHHHHcCCeEEeeeeeecC-CCceEeeHHHHHHHhhc-CCEEEEECCCCC
Confidence 9999999999999999998777776642 3556677 77777664 11 011236888887 666 999999999999
Q ss_pred ccccCC--C---Cccc-cCCCcEEEEeccCcCC----CCccccccc-------cEEEeCCCccccCCc--cEEEEEcH-H
Q 043610 221 HGVEFK--E---YPSA-KNSTGILVADMSSNFC----SKPVDVTRF-------GVIYAGAQKNVGPSG--VTIVIVRK-D 280 (430)
Q Consensus 221 tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G----~~~idl~~~-------d~~~~s~~K~~gp~G--~g~l~v~~-~ 280 (430)
||.+++ + |.++ +++|+++++|++|+.+ ..+.++..+ .+++.|++|++|++| +|++++++ +
T Consensus 177 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~ 256 (391)
T 4dq6_A 177 VGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEK 256 (391)
T ss_dssp TTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHH
T ss_pred CCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHH
Confidence 999988 3 4444 5899999999998863 222333322 278899999998767 78888875 6
Q ss_pred HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-cCCceecCCC
Q 043610 281 LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-SNGFYKCPVE 359 (430)
Q Consensus 281 ~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~~~~~ 359 (430)
+.+.+... ... ...++++...+.++..+++... ..++.+.++++++++++++.|++ .+|+.+..
T Consensus 257 ~~~~~~~~----------~~~-~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-- 321 (391)
T 4dq6_A 257 DYKLLDDA----------FTR-IDIKRNNCFSLVATEASYNNGE--SWLESFLEYLESNIDFAIKYINENMPKLKVRK-- 321 (391)
T ss_dssp HHHHHHHH----------HHH-TTCCCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHHCTTSEECC--
T ss_pred HHHHHHHH----------HHh-hcCCCCCHHHHHHHHHHHhchH--HHHHHHHHHHHHHHHHHHHHHHhhCCCCEecC--
Confidence 66553210 000 1235788888888888887532 23688899999999999999987 45887753
Q ss_pred CCCCccceEEEEcCCCchhH-HHHHHHHHc-CCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610 360 KSVRSFMNVPFTLEKSDLEA-EFVKEAAKE-KMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 360 ~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~-Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~ 426 (430)
+ .....+.+.++..+.+. ++.+.|.++ ||.+.+|.. ..+++|||++ +++++++++++.|++++
T Consensus 322 ~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 322 P--EGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA--CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp C--SBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred C--CccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 1 23334446666312233 799999887 999876532 2368999998 58999999999999876
No 46
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.95 E-value=2.7e-26 Score=229.01 Aligned_cols=324 Identities=13% Similarity=0.109 Sum_probs=229.7
Q ss_pred CCCceeecCCCC---CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610 68 EDRVFNFAAGPA---NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT 144 (430)
Q Consensus 68 ~~~~~l~~~gp~---~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT 144 (430)
.+.+++|+.|.. ..++.+++++.+.+.++. .+.+. +..........+++++.+++++|.+ +.++++ +||
T Consensus 42 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~-~~~~~---~~~~~g~~~~~~~l~~~la~~~~~~---~~i~~~-sGt 113 (399)
T 3tqx_A 42 EKEVLNFCANNYLGLADHPALIKTAQTVVEQYG-FGMAS---VRFICGTQTIHKELEKDISEFLGTD---DTILYS-SCF 113 (399)
T ss_dssp TEEEEECSSCCTTSCTTCHHHHHHHHHHHHHHC-SCCCS---CCCCCCCBHHHHHHHHHHHHHHTCS---EEEEES-CHH
T ss_pred CeeEEEeeccCcccccCCHHHHHHHHHHHHHhC-CCCCC---cCccccCchHHHHHHHHHHHHHCCC---cEEEEC-chH
Confidence 344666766631 347899999998887642 11110 0111111245678999999999986 345554 568
Q ss_pred HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC------CccEEEEe
Q 043610 145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP------DAKYLHIC 215 (430)
Q Consensus 145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~------~~~lv~i~ 215 (430)
+++..++.+++++||.|++..+.|.+. ...++..| +++.++. .|+++++ +.+ ++++|+++
T Consensus 114 ~a~~~~l~~~~~~gd~v~~~~~~~~~~--~~~~~~~g~~~~~~~~---------~d~~~l~~~l~~~~~~~~~~~~v~~~ 182 (399)
T 3tqx_A 114 DANGGLFETLLGPEDAIISDELNHASI--IDGIRLCKAQRYRYKN---------NAMGDLEAKLKEADEKGARFKLIATD 182 (399)
T ss_dssp HHHHTTHHHHCCTTCEEEEETTCCHHH--HHHHHSCCSEEEEECT---------TCTTHHHHHHHHHHTTTCSSEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEECCcccHHH--HHHHHHcCCceeEeCC---------CCHHHHHHHHHhhhccCCCceEEEEe
Confidence 999999989999999998766655543 23444556 5554543 3445554 322 79999999
Q ss_pred ecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc------ccc----ccccEEEeCCCcccc-CCccEEEEEcHHH
Q 043610 216 ANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP------VDV----TRFGVIYAGAQKNVG-PSGVTIVIVRKDL 281 (430)
Q Consensus 216 ~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~------idl----~~~d~~~~s~~K~~g-p~G~g~l~v~~~~ 281 (430)
+++|+||.+.| +|.++ +++|+++++|++|+.|... ++. ...|+++.|+||++| ++| |+++.++++
T Consensus 183 ~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~~~ 261 (399)
T 3tqx_A 183 GVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASG-GYTSGHKEI 261 (399)
T ss_dssp SEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCC-EEEEECHHH
T ss_pred CCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCce-EEEEcCHHH
Confidence 99999999999 78886 6899999999999766532 121 234799999999997 999 999999998
Q ss_pred HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 043610 282 LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS 361 (430)
Q Consensus 282 ~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~ 361 (430)
++.+......+ ...++++...+.++..+++.+. .+.+.+.++++++++++++.|.+ .|+++.+ +
T Consensus 262 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~- 325 (399)
T 3tqx_A 262 IEWLRNRSRPY----------LFSNTVAPVIVATSLKVLELLK--TEGPQLRKQLQENSRYFRAGMEK-LGFQLVP--G- 325 (399)
T ss_dssp HHHHHHHCHHH----------HSSCCCCHHHHHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHHHH-HTCCBCC--C-
T ss_pred HHHHHHhCcce----------eccCCCcHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHH-cCCCcCC--C-
Confidence 87643211100 1135778888888888998763 26899999999999999999997 4776652 1
Q ss_pred CCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC-----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 362 VRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR-----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 362 ~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~-----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
.+ ..+.+.+++.....++.++|.++||.+.++.. ..+++||+++.+++++|+++++++|++++++.
T Consensus 326 -~~-~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 326 -NH-PIIPVMLGDAQLATNMADHLLQEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp -SS-SEEEEEEECHHHHHHHHHHHHHTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred -CC-CEEEEEeCCHHHHHHHHHHHHHCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 23 34666776421223799999999999765321 12479999999999999999999999998753
No 47
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.95 E-value=6.7e-26 Score=229.46 Aligned_cols=324 Identities=13% Similarity=0.078 Sum_probs=232.2
Q ss_pred CCCCceeecCCC--C-CCcHHHHHHHHHHhhhcc-CCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610 67 QEDRVFNFAAGP--A-NLPEKVLLKAQSELYNWR-GSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG 142 (430)
Q Consensus 67 ~~~~~~l~~~gp--~-~~~~~V~~a~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g 142 (430)
..+.+++|+.|- . ..++.|++++.+.+.++. +.+.+.+ ..+ .....+++++.|++++|.+ +++++ ++
T Consensus 62 ~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~---~~G--~~~~~~~l~~~la~~~g~~---~~i~~-~s 132 (427)
T 2w8t_A 62 RGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRM---LNG--TFHDHMEVEQALRDFYGTT---GAIVF-ST 132 (427)
T ss_dssp TTEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTT---TTC--CCHHHHHHHHHHHHHHTCS---EEEEE-SC
T ss_pred CCceEEEEECcccccCCCCHHHHHHHHHHHHHhCCCCccccc---ccC--CcHHHHHHHHHHHHHhCCC---ceEEe-cC
Confidence 345567777773 2 367899999999887642 1221111 111 1245668899999999985 45665 56
Q ss_pred HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC----CccEEEEe
Q 043610 143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP----DAKYLHIC 215 (430)
Q Consensus 143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~----~~~lv~i~ 215 (430)
|++++..++..++++||.|++....+.+. ...++..| +++.++ ..|+++|+ +.+ ++++|+++
T Consensus 133 Gs~a~~~al~~l~~~gd~vl~~~~~h~~~--~~~~~~~g~~~~~~~---------~~d~~~le~~l~~~~~~~~~~v~~~ 201 (427)
T 2w8t_A 133 GYMANLGIISTLAGKGEYVILDADSHASI--YDGCQQGNAEIVRFR---------HNSVEDLDKRLGRLPKEPAKLVVLE 201 (427)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEETTCCHHH--HHHHHHSCSEEEEEC---------TTCHHHHHHHHHTSCSSSCEEEEEE
T ss_pred cHHHHHHHHHHhcCCCCEEEECCcccHHH--HHHHHHcCCeeEEeC---------CCCHHHHHHHHHhccCCCCeEEEEc
Confidence 78899998888889999888765554443 23344556 544443 14666665 433 78999999
Q ss_pred ecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc---------cccc-cccEEEeCCCccccCCccEEEEEcHHHH
Q 043610 216 ANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP---------VDVT-RFGVIYAGAQKNVGPSGVTIVIVRKDLL 282 (430)
Q Consensus 216 ~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~---------idl~-~~d~~~~s~~K~~gp~G~g~l~v~~~~~ 282 (430)
+++|++|.+.| +|.++ +++|+++++|++|+.|... +++. +.|+++.|++|++|++| |+++++++++
T Consensus 202 ~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g-G~v~~~~~l~ 280 (427)
T 2w8t_A 202 GVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG-GFVVSNHPKF 280 (427)
T ss_dssp SEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC-EEEEECCTTG
T ss_pred CCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC-CEEEeCHHHH
Confidence 99999999999 78886 6899999999999987654 4443 34799999999999889 9999998887
Q ss_pred hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610 283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV 362 (430)
Q Consensus 283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~ 362 (430)
+.+.+....+ ...++++...+.++.++|+.+. .++++.++++++++++++.|.+ .|+.+.. .+ .
T Consensus 281 ~~l~~~~~~~----------~~~~~~~~~~~aa~~~al~~~~---~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~-~ 344 (427)
T 2w8t_A 281 EAVRLACRPY----------IFTASLPPSVVATATTSIRKLM---TAHEKRERLWSNARALHGGLKA-MGFRLGT-ET-C 344 (427)
T ss_dssp GGGGGTCHHH----------HSSCCCCHHHHHHHHHHHHHHT---SCHHHHHHHHHHHHHHHHHHHH-HTCEESC-SS-C
T ss_pred HHHHHhcccc----------cccCCCCHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHH-cCCcccC-CC-C
Confidence 7654321111 0124677777888888898764 2578999999999999999997 4887652 11 1
Q ss_pred CccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCC-----CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 363 RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRS-----VGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 363 rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~-----~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
.+ .++.+.+++.....++.+.|.++||.+.++... .+++||+++.+++++|+++++++|++++++
T Consensus 345 ~~-~~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~ 414 (427)
T 2w8t_A 345 DS-AIVAVMLEDQEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRA 414 (427)
T ss_dssp CS-SEEEEEESSHHHHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CC-CEEEEEECCHHHHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 34 357777764212237889999999997654321 247999999999999999999999998765
No 48
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.95 E-value=6.7e-26 Score=234.42 Aligned_cols=332 Identities=12% Similarity=-0.015 Sum_probs=234.3
Q ss_pred CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--CCcEEEE--EeCcHHHHHHHHHh
Q 043610 77 GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--QEYSVLF--LQGGATTQFAAVPL 152 (430)
Q Consensus 77 gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~~~~vv~--~~~gaT~a~~~~~~ 152 (430)
.+..+++.+.+++.+.+..... ....++...++.+++++.+++++|++ ++ ++++ +++|+|+++..++.
T Consensus 64 ~t~~~~~~v~~~l~~~~~~~~~-------~~~~~p~~~~le~~~~~~la~l~g~~~~~~-~~~~g~~t~ggtea~~~a~~ 135 (502)
T 3hbx_A 64 VTTWMEPECDKLIMSSINKNYV-------DMDEYPVTTELQNRCVNMIAHLFNAPLEEA-ETAVGVGTVGSSEAIMLAGL 135 (502)
T ss_dssp SCCCCCHHHHHHHHHTTTCBTT-------CTTTCHHHHHHHHHHHHHHHHHTTCCCCSS-CCCEEEEESSHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHhccCCC-------ChhcChhHHHHHHHHHHHHHHHhCCCcccc-cCCcceecCcHHHHHHHHHH
Confidence 3466788999999887643111 11335677888889999999999998 43 3222 35789999998877
Q ss_pred hcCCC--------CC-----cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEee
Q 043610 153 NLCTP--------ND-----PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICA 216 (430)
Q Consensus 153 sl~~~--------gd-----~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~ 216 (430)
++..+ |+ +|++....+++ +.+.++..| +++.++..+ .+..+|+++++ +++++++|++++
T Consensus 136 a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s--~~~~~~~~G~~~~~v~~~~---~~~~~d~~~l~~~i~~~t~~v~~~~ 210 (502)
T 3hbx_A 136 AFKRKWQNKRKAEGKPVDKPNIVTGANVQVC--WEKFARYFEVELKEVKLSE---GYYVMDPQQAVDMVDENTICVAAIL 210 (502)
T ss_dssp HHHHHHHHHHHHTTCCCSCCEEEEETTCCHH--HHHHHHHTTCEEEEECCBT---TBCSCCHHHHHHHCCTTEEEEEEEB
T ss_pred HHHHHHhHHHHhcCCCCCCcEEEEcCCchHH--HHHHHHHcCceeEEEecCC---CcCcCCHHHHHHHHhhCCEEEEEec
Confidence 76433 65 67766556655 334566678 888887643 21357888887 788999999999
Q ss_pred cCCCccccCC--CCccc-cCC------CcEEEEeccCcCCC-------Cccccc--cccEEEeCCCccc-cCCccEEEEE
Q 043610 217 NETIHGVEFK--EYPSA-KNS------TGILVADMSSNFCS-------KPVDVT--RFGVIYAGAQKNV-GPSGVTIVIV 277 (430)
Q Consensus 217 ~~t~tG~~~p--ei~~~-~~~------g~~lvvD~a~s~G~-------~~idl~--~~d~~~~s~~K~~-gp~G~g~l~v 277 (430)
++|+||.+.| +|.++ +++ |++++||++|+.+. .+.++. ..|++.+++|||+ +|.|+|++++
T Consensus 211 ~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G~~~~ 290 (502)
T 3hbx_A 211 GSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIW 290 (502)
T ss_dssp SCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEE
T ss_pred CCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeEEEEE
Confidence 9999999999 78886 566 99999999998433 333443 4589999999999 6999999998
Q ss_pred cH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec
Q 043610 278 RK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC 356 (430)
Q Consensus 278 ~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~ 356 (430)
++ +.+.......+.|+... .......++.+...+.++..+++.+.. .|++++.++..+++++++++|.+..|++++
T Consensus 291 ~~~~~l~~~~~~~~~yl~~~--~~~~~~~~sr~~~~~~a~~~al~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 367 (502)
T 3hbx_A 291 RNKEDLPEELIFHINYLGAD--QPTFTLNFSKGSSQVIAQYYQLIRLGH-EGYRNVMENCRENMIVLREGLEKTERFNIV 367 (502)
T ss_dssp SSGGGSCGGGCEEECSSSSC--EEECCSCCSCBSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTTCEEEC
T ss_pred eCHHHhhHHhccCcccccCC--CCCccccCCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 74 44322211112222111 111122256665566777777876653 478999999999999999999985568886
Q ss_pred CCCCCCCccceEEEEcCCC-chhH-HHHHHHHHcCCeecC----CC-CCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610 357 PVEKSVRSFMNVPFTLEKS-DLEA-EFVKEAAKEKMVQLK----GH-RSVGGMRASIYNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 357 ~~~~~~rs~~iv~f~~~~~-~~~~-~~~~~L~~~Gi~~~~----g~-~~~g~iRis~~~~~t~edv~~ll~~L~~~~~ 427 (430)
. . .... .+++|.+++. +.+. ++.+.|.++||++.. .. ...+.+||+++.+++++|+++|++.|+++++
T Consensus 368 ~-~-~~~~-~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~ 442 (502)
T 3hbx_A 368 S-K-DEGV-PLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMR 442 (502)
T ss_dssp S-C-SSSS-SEEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred e-C-CCCc-eEEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 4 2 1133 4688888752 2344 799999999998531 11 1124799999999999999999999998765
No 49
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.95 E-value=2.4e-26 Score=227.78 Aligned_cols=320 Identities=11% Similarity=0.017 Sum_probs=227.1
Q ss_pred CCCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC------CCCCcEEEE
Q 043610 67 QEDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN------IPQEYSVLF 138 (430)
Q Consensus 67 ~~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g------~~~~~~vv~ 138 (430)
..+++++|+.|. .+.++.|++++.+.+.+. . .++.... .++|+.++++++ ++++ ++++
T Consensus 21 ~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~----~-----~~y~~~~----~~lr~~la~~~~~~~~~~~~~~-~i~~ 86 (377)
T 3fdb_A 21 YGQGVLPLWVAESDFSTCPAVLQAITDAVQRE----A-----FGYQPDG----SLLSQATAEFYADRYGYQARPE-WIFP 86 (377)
T ss_dssp SCTTSEECCSSCCCSCCCHHHHHHHHHHHHTT----C-----CSSCCSS----CCHHHHHHHHHHHHHCCCCCGG-GEEE
T ss_pred cCCCeeeecccCCCCCCCHHHHHHHHHHHHcC----C-----CCCCCCC----HHHHHHHHHHHHHHhCCCCCHH-HEEE
Confidence 456677777654 467899999999887641 1 1111100 244455555554 5554 6776
Q ss_pred EeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEe
Q 043610 139 LQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHIC 215 (430)
Q Consensus 139 ~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~ 215 (430)
+ +|++++++.++..++++||+|++..+++.+. ...++..| +++.++... + +|+++++ +++++++|+++
T Consensus 87 t-~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~~~~~~----~--~d~~~l~~~l~~~~~~v~i~ 157 (377)
T 3fdb_A 87 I-PDVVRGLYIAIDHFTPAQSKVIVPTPAYPPF--FHLLSATQREGIFIDATG----G--INLHDVEKGFQAGARSILLC 157 (377)
T ss_dssp E-SCHHHHHHHHHHHHSCTTCCEEEEESCCTHH--HHHHHHHTCCEEEEECTT----S--CCHHHHHHHHHTTCCEEEEE
T ss_pred e-CChHHHHHHHHHHhcCCCCEEEEcCCCcHhH--HHHHHHcCCEEEEccCCC----C--CCHHHHHHHhccCCCEEEEe
Confidence 5 8899999999999999999999888887764 34566678 888887742 2 7888887 67789999999
Q ss_pred ecCCCccccCC--CC---ccc-cCCCcEEEEeccCcC----C-CCccccccc-----cEEEeCCCccccCCc--cEEEEE
Q 043610 216 ANETIHGVEFK--EY---PSA-KNSTGILVADMSSNF----C-SKPVDVTRF-----GVIYAGAQKNVGPSG--VTIVIV 277 (430)
Q Consensus 216 ~~~t~tG~~~p--ei---~~~-~~~g~~lvvD~a~s~----G-~~~idl~~~-----d~~~~s~~K~~gp~G--~g~l~v 277 (430)
+++|+||.++| ++ .++ +++|+++++|++|+. | ..+.++..+ ++++.|++|++|++| +|++++
T Consensus 158 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 237 (377)
T 3fdb_A 158 NPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIF 237 (377)
T ss_dssp SSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEEC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEe
Confidence 99999999998 44 443 589999999999875 3 233344332 278899999998777 788777
Q ss_pred -cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-cCCcee
Q 043610 278 -RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-SNGFYK 355 (430)
Q Consensus 278 -~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~ 355 (430)
++++++.+..... ...++++...++++..+|+... ..++.+.++++++++++++.|++ ..|+.+
T Consensus 238 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 303 (377)
T 3fdb_A 238 SNPSDAEHWQQLSP------------VIKDGASTLGLIAAEAAYRYGT--DFLNQEVAYLKNNHDFLLHEIPKRIPGAKI 303 (377)
T ss_dssp CSHHHHHHHHHSCH------------HHHCCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred CCHHHHHHHHHHHH------------hhcCCCCHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHHHHhhCCCceE
Confidence 6777665432110 0124678888888888887532 24688899999999999999987 458877
Q ss_pred cCCCCCCCccceEEEEcCCCchhHHHHHHHHHc-CCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 356 CPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKE-KMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 356 ~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
.. + .....+.+.++..+.+.++.+.|.++ ||.+.+|.. ..+++|||++. ++++++++++.|+++++++
T Consensus 304 ~~--~--~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~--~~e~i~~~l~~l~~~l~~~ 376 (377)
T 3fdb_A 304 TP--M--QATYLMWIDFRDTTIEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT--SREVLEEAIDRMAKAVSHH 376 (377)
T ss_dssp CC--C--SBCSEEEEECTTSCCCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHTTC
T ss_pred ec--C--CeeEEEEEECcccCCCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC--CHHHHHHHHHHHHHHHhhc
Confidence 53 1 23344456776532334577777554 999877542 24689999984 8999999999999988764
No 50
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.95 E-value=1.4e-26 Score=229.77 Aligned_cols=326 Identities=13% Similarity=0.075 Sum_probs=229.5
Q ss_pred CCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCcH
Q 043610 68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGGA 143 (430)
Q Consensus 68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~ga 143 (430)
.+++++|+.|. .+.++.|++++.+.+.+. . .+++....+..+++++.+++.+| ++++ +|+++ +|+
T Consensus 23 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----~-----~~y~~~~~~~~~~l~~~l~~~~g~~~~~~-~v~~~-~g~ 91 (383)
T 3kax_A 23 NEELIHAWIADMDFEVPQPIQTALKKRIEHP----I-----FGYTLPPENIGDIICNWTKKQYNWDIQKE-WIVFS-AGI 91 (383)
T ss_dssp SSCCEECCCSSCSSCCCHHHHHHHHHHHHSC----C-----CCCCCCCTTHHHHHHHHHHHHHCCCCCGG-GEEEE-SCH
T ss_pred CCCeeecccccCCCCCCHHHHHHHHHHHhcC----C-----CCCCCCCHHHHHHHHHHHHHHhCCCCChh-hEEEc-CCH
Confidence 34566776654 457899999999887541 1 11111133556788899999999 4554 67765 889
Q ss_pred HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610 144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI 220 (430)
Q Consensus 144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~ 220 (430)
|++++.++..++++||+|++..+++.+.. ..++..| +++.++...... ...+|+++++ +++++++|++++++|+
T Consensus 92 ~~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~v~i~~p~np 168 (383)
T 3kax_A 92 VPALSTSIQAFTKENESVLVQPPIYPPFF--EMVTTNNRQLCVSPLQKQND-TYAIDFEHLEKQFQQGVKLMLLCSPHNP 168 (383)
T ss_dssp HHHHHHHHHHHCCTTCEEEECSSCCHHHH--HHHHHTTCEEEECCCEEETT-EEECCHHHHHHHHTTTCCEEEEESSBTT
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCcHHHH--HHHHHcCCEEEeccceecCC-cEEEcHHHHHHHhCcCCeEEEEeCCCCC
Confidence 99999999999999999998777766543 4566677 776666532100 1136888887 7889999999999999
Q ss_pred ccccCC--CCcc---c-cCCCcEEEEeccCcCCC----Cccccccc-------cEEEeCCCccccCCc--cEEEEE-cHH
Q 043610 221 HGVEFK--EYPS---A-KNSTGILVADMSSNFCS----KPVDVTRF-------GVIYAGAQKNVGPSG--VTIVIV-RKD 280 (430)
Q Consensus 221 tG~~~p--ei~~---~-~~~g~~lvvD~a~s~G~----~~idl~~~-------d~~~~s~~K~~gp~G--~g~l~v-~~~ 280 (430)
||.++| ++.+ + +++|+++++|++|+.+. .+.++..+ .+++.|++|++|++| +|++++ +++
T Consensus 169 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 248 (383)
T 3kax_A 169 IGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEK 248 (383)
T ss_dssp TTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHH
T ss_pred CCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHH
Confidence 999999 4444 3 58899999999987632 22233222 278999999999777 788888 577
Q ss_pred HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-cCCceecCCC
Q 043610 281 LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-SNGFYKCPVE 359 (430)
Q Consensus 281 ~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~~~~~ 359 (430)
+++.+.... . ....++++...++++..+++... ..++.+.++++++++++++.|++ ..|+.+..
T Consensus 249 ~~~~~~~~~----------~-~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-- 313 (383)
T 3kax_A 249 LRQAFTSIQ----------Y-RQGFHGLNIFAYTAMQSAYTECN--DWLNEIRFYIEDNAKFACEYIKDHIPTLSVMK-- 313 (383)
T ss_dssp HHHHHHHHH----------H-HTTCCCCCHHHHHHHHHHTTTCH--HHHHHHHHHHHHHHHHHHHHHHHHCTTCEECC--
T ss_pred HHHHHHHHH----------h-hcccCCCCHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHHHHHHHHhhCCCceEec--
Confidence 766542100 0 01124788888888888887432 24688899999999999999987 45787653
Q ss_pred CCCCccceEEEEcCCCchhH-HHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610 360 KSVRSFMNVPFTLEKSDLEA-EFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 360 ~~~rs~~iv~f~~~~~~~~~-~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~ 426 (430)
+ .....+.+.++..+.+. ++.+.|. ++||.+.+|.. ..+++|||++ +++++++++++.|++++
T Consensus 314 ~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 314 P--EGSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIG--CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp C--SBSSEEEEECGGGCCCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECS--SCHHHHHHHHHHHHHHH
T ss_pred C--CceEEEEEEccccCCCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 1 23333446666322233 7899986 68999877532 2368999998 48999999999999875
No 51
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.95 E-value=1.7e-25 Score=226.35 Aligned_cols=337 Identities=10% Similarity=0.014 Sum_probs=230.9
Q ss_pred CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC------CCCCcEEEEEe
Q 043610 69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN------IPQEYSVLFLQ 140 (430)
Q Consensus 69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g------~~~~~~vv~~~ 140 (430)
++++.|+.|- .++++.|++++.+.+.+... .++.... -..++|+.++++++ ++++ +|+++
T Consensus 44 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~--------~~y~~~~--g~~~lr~~la~~~~~~~g~~~~~~-~i~~t- 111 (437)
T 3g0t_A 44 TKFCRMEMGVPGLPAPQIGIETEIQKLREGVA--------SIYPNLD--GLPELKQEASRFAKLFVNIDIPAR-ACVPT- 111 (437)
T ss_dssp CCCEECCCCSCCSCCCHHHHHHHHHHHHHTGG--------GSCCCTT--CCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-
T ss_pred CCEEeccCcCCCCCCCHHHHHHHHHHHhCCcC--------cCCCCCC--ChHHHHHHHHHHHHHhhCCCCCcc-cEEEe-
Confidence 4566666544 45689999999988763110 1111110 01244555555554 3444 67765
Q ss_pred CcHHHHHHHHHhhcC--CCCC--cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c-CCCccEE
Q 043610 141 GGATTQFAAVPLNLC--TPND--PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q-NPDAKYL 212 (430)
Q Consensus 141 ~gaT~a~~~~~~sl~--~~gd--~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i-~~~~~lv 212 (430)
+|+|++++.++.+++ ++|| +|++..+++.+. ...++..| +++.++..+ .+..+|+++++ + ++++++|
T Consensus 112 ~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~--~~~~~~~g~~~~~v~~~~---~~~~~d~~~l~~~l~~~~~~~v 186 (437)
T 3g0t_A 112 VGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLN--KLQCRILGQKFESFDLFE---YRGEKLREKLESYLQTGQFCSI 186 (437)
T ss_dssp SHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHH--HHHHHHHTCCCEEEEGGG---GCTTHHHHHHHHHHTTTCCCEE
T ss_pred CCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhH--HHHHHHcCCEEEEEeecC---CCCccCHHHHHHHHhcCCceEE
Confidence 899999999999998 9999 999888887664 34566778 888888752 34347888887 6 7889999
Q ss_pred EEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCC----Ccc--------cccc-c--cEEEeCCCccccCCc
Q 043610 213 HICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS----KPV--------DVTR-F--GVIYAGAQKNVGPSG 271 (430)
Q Consensus 213 ~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~~i--------dl~~-~--d~~~~s~~K~~gp~G 271 (430)
++++++|+||.+++ + |.++ +++|+++++|++|+.+. .++ ++.+ . ++++.|++|++|++|
T Consensus 187 ~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 266 (437)
T 3g0t_A 187 IYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAG 266 (437)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGG
T ss_pred EEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCcc
Confidence 99999999999998 4 4444 58999999999997522 222 3333 2 488999999999778
Q ss_pred --cEEEEEcHHHHh-ccCCCCCcccc-------ccchhhcCCCCCCccHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHH
Q 043610 272 --VTIVIVRKDLLG-NAQDKTPLMLD-------YKIHDENNSLYNTPPCYCIYMCGLVFEYLLE-LGGLNEVEKMNRKKA 340 (430)
Q Consensus 272 --~g~l~v~~~~~~-~~~~~~p~~~~-------~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~-~~g~~~v~~~~~~l~ 340 (430)
+|++++++++++ ......+.+.. +.. . .....++++...++++..+|+.... ...++.+.+++++++
T Consensus 267 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 344 (437)
T 3g0t_A 267 QRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSS-A-LYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKA 344 (437)
T ss_dssp GCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTT-H-HHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHH
T ss_pred ceeEEEEECHHHhhhhhhcccccccccchhHHHHHH-H-HhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHH
Confidence 899999999887 51100000000 000 0 0011257788888888888886431 011889999999999
Q ss_pred HHHHHHHHccCCceecC----CCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCC----CCeeEEeecCCCCH
Q 043610 341 ELLYNVIDGSNGFYKCP----VEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRS----VGGMRASIYNAMPL 412 (430)
Q Consensus 341 ~~l~~~l~~~~G~~~~~----~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~----~g~iRis~~~~~t~ 412 (430)
+++++.|.+ .|+.+.. ..+.. ....+.+.+++ ....++.+.|.++||.+.++... .+++|||++ +.++
T Consensus 345 ~~l~~~L~~-~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~ 420 (437)
T 3g0t_A 345 RIMKKMFLD-NGFNIVYDKDGNEPLA-DGFYFTVGYKG-MDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTS-LLPE 420 (437)
T ss_dssp HHHHHHHHT-TTEEESSCEETTEECC-SSSEEEEEETT-CCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECS-SSCG
T ss_pred HHHHHHHHH-cCCEEeccccCCCCCc-eeEEEEEecCC-CCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEe-cCCH
Confidence 999999997 5887751 00111 22345567763 22337999999999998765421 257999998 5599
Q ss_pred HHHHHHHHHHHHHHHh
Q 043610 413 AGVEKLVAFMKDFQAK 428 (430)
Q Consensus 413 edv~~ll~~L~~~~~~ 428 (430)
+|+++++++|++++++
T Consensus 421 e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 421 SQFPDLEKRLQMLNAE 436 (437)
T ss_dssp GGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999998764
No 52
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.94 E-value=1.7e-25 Score=218.22 Aligned_cols=305 Identities=10% Similarity=0.076 Sum_probs=219.5
Q ss_pred CceeecC--CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610 70 RVFNFAA--GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF 147 (430)
Q Consensus 70 ~~~l~~~--gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~ 147 (430)
+.+.|+. .|.++++.|++++.+.+.+. +++.. ....++|+.+++++|++++ +|+++ +|+++++
T Consensus 17 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~~----------~~y~~---~~~~~lr~~la~~~~~~~~-~i~~t-~G~~~~l 81 (337)
T 3p1t_A 17 QAVCLAFNENPEAVEPRVQAAIAAAAARI----------NRYPF---DAEPRVMRKLAEHFSCPED-NLMLV-RGIDECF 81 (337)
T ss_dssp CCEECSSCCCCSCCCHHHHHHHHHHGGGT----------TSCCT---THHHHHHHHHHHHHTSCGG-GEEEE-SHHHHHH
T ss_pred CceEeeCCCCCCCCCHHHHHHHHHhhhhh----------ccCCC---CchHHHHHHHHHHhCcCHH-HEEEe-CCHHHHH
Confidence 3444444 56778999999998876531 12211 2356889999999999875 67765 8899999
Q ss_pred HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCC
Q 043610 148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFK 226 (430)
Q Consensus 148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p 226 (430)
+.++..+ +||+|++..+++.+. ...++..| +++.++... +..+|+++++-.+++++|++++++|+||.++|
T Consensus 82 ~~~~~~~--~gd~vl~~~p~~~~~--~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~~~~~~v~i~~p~nptG~~~~ 153 (337)
T 3p1t_A 82 DRISAEF--SSMRFVTAWPGFDGY--RARIAVSGLRHFEIGLTD----DLLLDPNDLAQVSRDDCVVLANPSNPTGQALS 153 (337)
T ss_dssp HHHHHHS--TTSEEEEESSSCSHH--HHHHTTSCCEEEEECBCT----TSSBCHHHHTTCCTTEEEEEESSCTTTCCCCC
T ss_pred HHHHHhc--CCCeEEEeCCCcHHH--HHHHHHcCCEEEEecCCC----CCCCCHHHHHhhcCCCEEEEeCCCCCCCCCCC
Confidence 9988887 899999887777664 24455667 777776642 22478888872267899999999999999999
Q ss_pred --CCccc-cCCCcEEEEeccCc-CCCC-c--cccccccEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccc
Q 043610 227 --EYPSA-KNSTGILVADMSSN-FCSK-P--VDVTRFGVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKI 297 (430)
Q Consensus 227 --ei~~~-~~~g~~lvvD~a~s-~G~~-~--idl~~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~ 297 (430)
++.++ +.+++ +++|++|+ ++.. + .+..+.++++.|++|++|++| +|++++++++++.+...
T Consensus 154 ~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~--------- 223 (337)
T 3p1t_A 154 AGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRK--------- 223 (337)
T ss_dssp HHHHHHHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTT---------
T ss_pred HHHHHHHHHhCCc-EEEECCChhhccccccccccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhh---------
Confidence 67776 56665 66799876 3322 2 223333589999999999777 69999999988765321
Q ss_pred hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCch
Q 043610 298 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDL 377 (430)
Q Consensus 298 ~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~ 377 (430)
...++++...+.++..+|+... .+++..+++.++++++.+.|.+ .|+.+.+ + .+ ..+.+..++
T Consensus 224 -----~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~~-~~~~~~~~~--- 286 (337)
T 3p1t_A 224 -----QWFCNVGTLDLHALEAALDNDR---AREAHIAKTLAQRRRVADALRG-LGYRVAS--S--EA-NFVLVENAA--- 286 (337)
T ss_dssp -----SCTTCSCHHHHHHHHHHHTCHH---HHHHHHHHHHHHHHHHHHHHHH-TTCCBCC--C--SS-SEEEEECTT---
T ss_pred -----cCCCCCCHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHHHHHH-CcCEECC--C--CC-eEEEEEcCC---
Confidence 1235677888888877776421 3567777888889999999987 5876643 1 12 345556553
Q ss_pred hHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610 378 EAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 378 ~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~ 427 (430)
..++.+.|.++||.+.+|.. ..+++|||++ +++|+++++++|+++.+
T Consensus 287 ~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 287 GERTLRFLRERGIQVKDAGQFGLHHHIRISIG---REEDNDRLLAALAEYSD 335 (337)
T ss_dssp THHHHHHHHHTTEECEEGGGGTCCSEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCeEEEECccCCCCCeEEEecC---CHHHHHHHHHHHHHHhh
Confidence 23677888899999877642 2468999987 79999999999998754
No 53
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.94 E-value=8.9e-26 Score=225.19 Aligned_cols=325 Identities=12% Similarity=0.074 Sum_probs=222.5
Q ss_pred CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHH
Q 043610 69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGAT 144 (430)
Q Consensus 69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT 144 (430)
+.+++|+.|- .++|+.+++++.+.+.+. ...|.. .....+..+.+.+.+...+|. +++ +|+++ +|++
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----~~~y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t-~g~~ 101 (385)
T 1b5p_A 31 VDLVALTAGEPDFDTPEHVKEAARRALAQG----KTKYAP---PAGIPELREALAEKFRRENGLSVTPE-ETIVT-VGGS 101 (385)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHHTT----CCSCCC---TTCCHHHHHHHHHHHHHTTCCCCCGG-GEEEE-SHHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhcC----CCCCCC---CCCCHHHHHHHHHHHHHHhCCCCChH-HEEEc-CChH
Confidence 3455665543 356789999988877531 111111 111233334444555554564 344 67764 8999
Q ss_pred HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610 145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH 221 (430)
Q Consensus 145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t 221 (430)
++++.++.+++++||+|++..+++.+. ...++..| +++.++..++ .+..+|+++++ +++++++|++++++|||
T Consensus 102 ~al~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~v~~~~p~NPt 177 (385)
T 1b5p_A 102 QALFNLFQAILDPGDEVIVLSPYWVSY--PEMVRFAGGVVVEVETLPE--EGFVPDPERVRRAITPRTKALVVNSPNNPT 177 (385)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCTHH--HHHHHHTTCEEEEEECCGG--GTTCCCHHHHHTTCCTTEEEEEEESSCTTT
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCchhH--HHHHHHcCCEEEEeecCcc--cCCCCCHHHHHHhcCCCCEEEEEeCCCCCC
Confidence 999999999999999999988887654 34566678 7778877531 23357888887 67889999999999999
Q ss_pred cccCC--C---Cccc-cCCCcEEEEeccCcCCCC---ccccccc----cEEEeCCCccccCCc--cEEEEEcHHHHhccC
Q 043610 222 GVEFK--E---YPSA-KNSTGILVADMSSNFCSK---PVDVTRF----GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQ 286 (430)
Q Consensus 222 G~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~---~idl~~~----d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~ 286 (430)
|.+++ + |.++ +++|+++++|++++.... ..++..+ ++++.|++|++|++| +|++++++++++.+.
T Consensus 178 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~ 257 (385)
T 1b5p_A 178 GAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMA 257 (385)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhcCCcccceEEEEeCHHHHHHHH
Confidence 99998 3 4443 588999999999875432 2233333 478899999999889 899999998877643
Q ss_pred CCCCccccccchhhcCCCCCCccHHHHHHHHHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCC
Q 043610 287 DKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY---LLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVR 363 (430)
Q Consensus 287 ~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~---l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~r 363 (430)
+. .. ....+++...+.++..+|+. .. . .++.++++++++++++++.|++. |+++.+ + .
T Consensus 258 ~~----------~~--~~~~~~~~~~~~a~~~~l~~~~~~~-~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~--~ 318 (385)
T 1b5p_A 258 SV----------SR--QSTTSPDTIAQWATLEALTNQEASR-A-FVEMAREAYRRRRDLLLEGLTAL-GLKAVR--P--S 318 (385)
T ss_dssp HH----------HH--TTTCSCCHHHHHHHHHHHHCHHHHH-H-HHHHHHHHHHHHHHHHHHHHHHH-TCCBCC--C--S
T ss_pred HH----------Hh--hccCCCCHHHHHHHHHHHhCCCcch-H-HHHHHHHHHHHHHHHHHHHHHHC-CCeecC--C--C
Confidence 20 00 11135566777777777763 22 2 36788999999999999999974 776643 1 1
Q ss_pred ccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610 364 SFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 364 s~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~ 427 (430)
....+.+.++..+.+. ++.+.|.++||.+.+|.. ..+++|||++ +++++++++++.|+++++
T Consensus 319 ~~~~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~--~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 319 GAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA--TSEENLRKALERFARVLG 383 (385)
T ss_dssp BTTEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGTCTTEEEEECC--SCHHHHHHHHHHGGGGC-
T ss_pred eeEEEEEecCCCCCCHHHHHHHHHHCCeEEecccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 2222334554212233 789999889999887642 2468999987 689999999999987654
No 54
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.94 E-value=4.4e-27 Score=242.15 Aligned_cols=347 Identities=12% Similarity=0.061 Sum_probs=235.3
Q ss_pred CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCC-CcHHHHHHHHHHHHHHHHHhCCCCCc---EEEEEeCcHH
Q 043610 69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSH-RGKEFKSIIEKAESDLRALLNIPQEY---SVLFLQGGAT 144 (430)
Q Consensus 69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~-~~~~~~~~~~~~r~~la~l~g~~~~~---~vv~~~~gaT 144 (430)
.+.+++.+|..++|+.|++++.+.+.+....|... ...+ ......++.+.+++.+++++|++.+. +|++ + +|+
T Consensus 44 ~~~i~L~a~e~~~~~~V~eA~~~~l~~~~~~g~p~-~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~-~-sGs 120 (483)
T 1rv3_A 44 RVGLELIASENFASRAVLEALGSCLNNKYSLGYPG-QRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQP-Y-SGS 120 (483)
T ss_dssp HSSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETT-EESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCC-S-SHH
T ss_pred hcCeEEEcCCCCCCHHHHHHHHHHHhccCcccCCC-ccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEE-C-CcH
Confidence 45788889999999999999998886533222210 0112 13445667778999999999998541 2443 3 456
Q ss_pred HHHHHHHhhcCCCCCcEEEEeCChhHHH--HHH----HHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEE
Q 043610 145 TQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFK----EAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHI 214 (430)
Q Consensus 145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~----~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i 214 (430)
+++.+++.++++|||+|++....+.++. +.. .++..| .++.++..-+ +.+..+|+++|+ ++ +++|+|++
T Consensus 121 ~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~-~~~~~iD~d~le~~i~~~~tklIi~ 199 (483)
T 1rv3_A 121 PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVN-PDTGYIDYDRLEENARLFHPKLIIA 199 (483)
T ss_dssp HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBC-TTTCSBCHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccc-cCCCcCCHHHHHHHHhhcCCcEEEE
Confidence 8888889999999999998775544321 100 011123 2555554211 122358899987 66 78999999
Q ss_pred eecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-----cccEEEeCCCccc-cCCccEEEEEcHHHHhcc
Q 043610 215 CANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-----RFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNA 285 (430)
Q Consensus 215 ~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-----~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~ 285 (430)
+++|++ .+.| +|.++ +++|+++++|++|+.|....++. ..|++++|+||++ ||.| |+++++++... +
T Consensus 200 -~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K~l~Gprg-G~i~~~~~~~~-~ 275 (483)
T 1rv3_A 200 -GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRA-GMIFYRRGVRS-V 275 (483)
T ss_dssp -CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSGGGCCCSC-EEEEEECSBCC--
T ss_pred -eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCcccCCCCCc-eEEEEcchhhh-h
Confidence 888877 8888 78886 68999999999998765543332 3489999999999 7999 99999976431 1
Q ss_pred CCC--CCccccccchh---hcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC
Q 043610 286 QDK--TPLMLDYKIHD---ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK 360 (430)
Q Consensus 286 ~~~--~p~~~~~~~~~---~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~ 360 (430)
... ....+++.... ......||++...+.++..+++.+.+ .+++++.++..++++++.+.|.+ .|++++.. .
T Consensus 276 ~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~-~ 352 (483)
T 1rv3_A 276 DPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMT-PEFKEYQRQVVANCRALSAALVE-LGYKIVTG-G 352 (483)
T ss_dssp ------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTS-HHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGG-S
T ss_pred ccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhC-hhHHHHHHHHHHHHHHHHHHHHh-cCCEeccC-C
Confidence 000 00000110000 01123578999999999999987653 36889999999999999999997 59887642 1
Q ss_pred CCCccceEEEEcCCCchhH-HHHHHHHHcCCeec----CCCC---CCCeeEEeecCCCC----HHHHHHHHHHHHHHHHh
Q 043610 361 SVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQL----KGHR---SVGGMRASIYNAMP----LAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 361 ~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~----~g~~---~~g~iRis~~~~~t----~edv~~ll~~L~~~~~~ 428 (430)
. ....+.+.+...+.+. ++.+.|.+.||.+. +|.. ..+++|||+..+++ ++|+++++++|+++++.
T Consensus 353 ~--~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 353 S--DNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp C--SSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred C--CCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 1 1123444554222333 67788888999987 6642 13579999998777 99999999999998754
No 55
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.94 E-value=9.9e-26 Score=224.95 Aligned_cols=325 Identities=12% Similarity=0.114 Sum_probs=224.5
Q ss_pred CCCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcH--HHHHHHHHHHHHHHHHhC--CCCCcEEEEEe
Q 043610 67 QEDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGK--EFKSIIEKAESDLRALLN--IPQEYSVLFLQ 140 (430)
Q Consensus 67 ~~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~--~~~~~~~~~r~~la~l~g--~~~~~~vv~~~ 140 (430)
..+++++|+.|- .++++.|++++.+.+.+. . ..+.. ...+..+++.+.+.+.+| ++++ +|+++
T Consensus 29 ~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~----~-----~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~v~~t- 97 (391)
T 3h14_A 29 AGRRIIHMEVGQPGTGAPRGAVEALAKSLETD----A-----LGYTVALGLPALRQRIARLYGEWYGVDLDPG-RVVIT- 97 (391)
T ss_dssp TTCCCEECCCSSCSSCSCHHHHHHHHHHHC-------------------CCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-
T ss_pred cCCCeEEccCCCCCCCCCHHHHHHHHHHHhcC----C-----CCCCCCCChHHHHHHHHHHHHHHhCCCCCHH-HEEEe-
Confidence 445677777654 456889999998877531 0 11111 123334444455555556 4444 67765
Q ss_pred CcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-cCCCccEEEEeecC
Q 043610 141 GGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-QNPDAKYLHICANE 218 (430)
Q Consensus 141 ~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-i~~~~~lv~i~~~~ 218 (430)
+|++++++.++.+++++||+|++..+++.+.. ..++..| +++.++...+ .+..+|+++++ . ++++|++++++
T Consensus 98 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~--~~~~v~i~~p~ 171 (391)
T 3h14_A 98 PGSSGGFLLAFTALFDSGDRVGIGAPGYPSYR--QILRALGLVPVDLPTAPE--NRLQPVPADFAGL--DLAGLMVASPA 171 (391)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--HHHHHTTCEEEEEECCGG--GTTSCCHHHHTTS--CCSEEEEESSC
T ss_pred cChHHHHHHHHHHhcCCCCEEEEcCCCCccHH--HHHHHcCCEEEEeecCcc--cCCCCCHHHHHhc--CCeEEEECCCC
Confidence 88999999999999999999998888876643 4566778 8888877542 22346888887 5 89999999999
Q ss_pred CCccccCC--C---Cccc-cCCCcEEEEeccCcCCC---Cccccccc---cEEEeCCCccccCCc--cEEEEEcHHHHhc
Q 043610 219 TIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS---KPVDVTRF---GVIYAGAQKNVGPSG--VTIVIVRKDLLGN 284 (430)
Q Consensus 219 t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~---~~idl~~~---d~~~~s~~K~~gp~G--~g~l~v~~~~~~~ 284 (430)
|+||.++| + |.++ +++|+++++|++|+... .+..+.++ .+++.|++|++|++| +|++++++++++.
T Consensus 172 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~ 251 (391)
T 3h14_A 172 NPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPEDQVRV 251 (391)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCGGGHHH
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCHHHHHH
Confidence 99999999 4 4443 58999999999987432 23333332 388899999999777 7999998887765
Q ss_pred cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610 285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS 364 (430)
Q Consensus 285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs 364 (430)
+... .....++++...++++.++|+. ...++.+.++++++++++.+.|++ .|+.... .+ ..
T Consensus 252 ~~~~------------~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~-~~--~~ 312 (391)
T 3h14_A 252 VERI------------AQNMFICAPHASQVAALAALDC---DAELQANLDVYKANRKLMLERLPK-AGFTRIA-PP--DG 312 (391)
T ss_dssp HHHH------------HHHTTCCCCHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHHHHH-HTCCCBC-CC--CB
T ss_pred HHHH------------HhhhccCCCHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHH-cCCCccc-CC--Ce
Confidence 4210 0012247788888888788872 235788999999999999999987 4554321 12 12
Q ss_pred cceEEEEcCCCchhH-HHHHHHHH-cCCeecCCCC-----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 365 FMNVPFTLEKSDLEA-EFVKEAAK-EKMVQLKGHR-----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 365 ~~iv~f~~~~~~~~~-~~~~~L~~-~Gi~~~~g~~-----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
...+.+.++..+.+. ++.+.|.+ +||.+.+|.. ..+++|||++. +++|++++++.|+++++++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~--~~~~i~~~l~~l~~~~~~~ 382 (391)
T 3h14_A 313 AFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR--ATADIEEGLDRLEAFMQAR 382 (391)
T ss_dssp TTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS--CHHHHHHHHHHHHHHHHHC
T ss_pred eEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence 234555666422233 78888766 4999876532 24579999987 7899999999999998765
No 56
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.94 E-value=5.6e-25 Score=217.20 Aligned_cols=315 Identities=13% Similarity=0.093 Sum_probs=224.7
Q ss_pred CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610 69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ 146 (430)
Q Consensus 69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a 146 (430)
+.++.|+.|. .++++.|++++.+.+.+. +.+ ...+... ...++|+.+++++|++++ +|+++ +|++++
T Consensus 26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~---~~~---~~~y~~~---~~~~lr~~la~~~g~~~~-~i~~t-~g~~~a 94 (360)
T 3hdo_A 26 ASWIKLNTNENPYPPSPEVVKAILEELGPD---GAA---LRIYPSA---SSQKLREVAGELYGFDPS-WIIMA-NGSDEV 94 (360)
T ss_dssp TTSEECSSCCCSSCCCHHHHHHHHHHHTTT---CGG---GGSCCCS---SCHHHHHHHHHHHTCCGG-GEEEE-SSHHHH
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHHhcc---cch---hhcCCCC---chHHHHHHHHHHhCcCcc-eEEEc-CCHHHH
Confidence 4566666654 567899999999887541 000 1111111 124788999999998765 77775 789999
Q ss_pred HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccC
Q 043610 147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEF 225 (430)
Q Consensus 147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~ 225 (430)
++.++.+++++||+|++..+++.+. ...++..| +++.++..+ ++ .+ +++.-..++++|++++++|+||.++
T Consensus 95 l~~~~~~l~~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~v~~~~--~~--~~--~~l~~~~~~~~v~i~~p~nptG~~~ 166 (360)
T 3hdo_A 95 LNNLIRAFAAEGEEIGYVHPSYSYY--GTLAEVQGARVRTFGLTG--DF--RI--AGFPERYEGKVFFLTTPNAPLGPSF 166 (360)
T ss_dssp HHHHHHHHCCTTCEEEEESSSCTHH--HHHHHHHTCEEEEECBCT--TS--SB--TTCCSSBCSSEEEEESSCTTTCCCC
T ss_pred HHHHHHHHhCCCCEEEEcCCChHHH--HHHHHHCCCEEEEeeCCC--CC--CH--HHHHhhcCCCEEEEeCCCCCCCCCc
Confidence 9999999999999999887776654 34566678 777777643 12 12 4454122467999999999999999
Q ss_pred C--CCccc-cCCCcEEEEeccCcC--CCCcccc-ccc--cEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccc
Q 043610 226 K--EYPSA-KNSTGILVADMSSNF--CSKPVDV-TRF--GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDY 295 (430)
Q Consensus 226 p--ei~~~-~~~g~~lvvD~a~s~--G~~~idl-~~~--d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~ 295 (430)
| ++.++ +++|+++++|++|+. +.....+ +.. .+++.|++|++|++| +|++++++++++.+...
T Consensus 167 ~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~------- 239 (360)
T 3hdo_A 167 PLEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEVIAALDKI------- 239 (360)
T ss_dssp CHHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHHHHHHHHH-------
T ss_pred CHHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCccceeeEeeCHHHHHHHHHh-------
Confidence 9 77776 678999999999873 2112222 122 378899999998767 79999998887764220
Q ss_pred cchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC
Q 043610 296 KIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS 375 (430)
Q Consensus 296 ~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~ 375 (430)
...+++|...+.++..+|+.. ..++++.++++++++++++.|.+ .|+.+.+ + .+ ..+.+.+++.
T Consensus 240 -------~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~--~--~~-~~~~~~~~~~ 303 (360)
T 3hdo_A 240 -------RDHYNLDRLAQAACVAALRDQ---AYLSECCRRIRETREWFTTELRS-IGYDVIP--S--QG-NYLFATPPDR 303 (360)
T ss_dssp -------SCSCCSCHHHHHHHHHHHHCH---HHHHHHHHHHHHHHHHHHHHHHH-TTCEECC--C--SS-SEEEEECTTC
T ss_pred -------CCCCCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHH-CCCEEcC--C--Cc-cEEEEECCCC
Confidence 012467888888888888752 24788999999999999999997 4887653 1 23 3455666642
Q ss_pred chhHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 376 DLEAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 376 ~~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
...++.+.|.++||.+.++.. ..+++|||++ +++|+++++++|+++.+.|
T Consensus 304 -~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~e~~~l~~al~~~~~~~ 355 (360)
T 3hdo_A 304 -DGKRVYDGLYARKVLVRHFSDPLLAHGMRISIG---TREEMEQTLAALKEIGEGH 355 (360)
T ss_dssp -CHHHHHHHHHHTTEECBCCCSTTTTTSEEEECC---CHHHHHHHHHHHHHHHC--
T ss_pred -CHHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHhccc
Confidence 233788999999999876542 2467999987 8999999999999987755
No 57
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.94 E-value=1e-25 Score=225.46 Aligned_cols=321 Identities=15% Similarity=0.115 Sum_probs=226.6
Q ss_pred CCCceeecCC-CCC--CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610 68 EDRVFNFAAG-PAN--LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT 144 (430)
Q Consensus 68 ~~~~~l~~~g-p~~--~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT 144 (430)
.+.+++|+.| |.+ .++.+++++.+.+.++. .+.+ .+.+........+++++.+++++|++ +.+++ ++||
T Consensus 44 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~-~~~~---~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~-~sGs 115 (401)
T 1fc4_A 44 GSHVINFCANNYLGLANHPDLIAAAKAGMDSHG-FGMA---SVRFICGTQDSHKELEQKLAAFLGME---DAILY-SSCF 115 (401)
T ss_dssp SCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHC-SCCC---SCHHHHCCBHHHHHHHHHHHHHHTCS---EEEEE-SCHH
T ss_pred CccEEEeeccCcccccCCHHHHHHHHHHHHHhC-CCCC---CCCcccCCcHHHHHHHHHHHHHhCCC---cEEEe-CChH
Confidence 3456666665 332 38899999998876532 1111 00000001245678999999999987 34555 4678
Q ss_pred HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC------CccEEEEe
Q 043610 145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP------DAKYLHIC 215 (430)
Q Consensus 145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~------~~~lv~i~ 215 (430)
+++..++..++++||.|++....+.+. ...++..| +++.++. .|+++++ +++ ++++|+++
T Consensus 116 ~a~~~~~~~~~~~gd~v~~~~~~~~~~--~~~~~~~g~~~~~~~~---------~d~~~l~~~l~~~~~~~~~~~~v~~~ 184 (401)
T 1fc4_A 116 DANGGLFETLLGAEDAIISDALNHASI--IDGVRLCKAKRYRYAN---------NDMQELEARLKEAREAGARHVLIATD 184 (401)
T ss_dssp HHHHTTHHHHCCTTCEEEEETTCCHHH--HHHHHTSCSEEEEECT---------TCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEcchhHHHH--HHHHHHcCCceEEECC---------CCHHHHHHHHHHhhccCCCceEEEEe
Confidence 899998888889999888665544332 23455556 5544431 3556665 332 78999999
Q ss_pred ecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC-c--------cccc-cccEEEeCCCccc-cCCccEEEEEcHHH
Q 043610 216 ANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK-P--------VDVT-RFGVIYAGAQKNV-GPSGVTIVIVRKDL 281 (430)
Q Consensus 216 ~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~-~--------idl~-~~d~~~~s~~K~~-gp~G~g~l~v~~~~ 281 (430)
+++|+||.+.| +|.++ +++|+++++|++|+.|.. + +++. +.|+++.|+||++ |+.| |++++++++
T Consensus 185 ~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g-G~~~~~~~~ 263 (401)
T 1fc4_A 185 GVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG-GYTAARKEV 263 (401)
T ss_dssp SEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC-EEEEECHHH
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC-EEEEcCHHH
Confidence 99999999999 78776 688999999999976553 2 3443 3479999999999 7778 999999998
Q ss_pred HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 043610 282 LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS 361 (430)
Q Consensus 282 ~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~ 361 (430)
++.+...... + ...++++...++++..+|+.+.+ .+.+.++++++++++++.|++ .|+++.+
T Consensus 264 ~~~l~~~~~~---~-------~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~l~~~L~~-~g~~~~~---- 325 (401)
T 1fc4_A 264 VEWLRQRSRP---Y-------LFSNSLAPAIVAASIKVLEMVEA---GSELRDRLWANARQFREQMSA-AGFTLAG---- 325 (401)
T ss_dssp HHHHHHHCHH---H-------HHSCCCCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHHHH-TTCCBCC----
T ss_pred HHHHHHhCcC---c-------eeCCCCCHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHH-cCCcccC----
Confidence 7764321100 0 01247788888989999987642 478899999999999999997 5776642
Q ss_pred CCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCCC-----CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 362 VRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHRS-----VGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 362 ~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~~-----~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
..+ ..+.+.+++ ..+. ++.+.|.++||.+.++... .+.+||+++.+++++|+++++++|++++++
T Consensus 326 ~~~-~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 396 (401)
T 1fc4_A 326 ADH-AIIPVMLGD-AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQ 396 (401)
T ss_dssp SSS-SEEEEEEEC-HHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCC-CEEEEEcCC-hHHHHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 123 456677764 2233 6889999999997664321 246999999999999999999999998765
No 58
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.94 E-value=2.9e-26 Score=228.04 Aligned_cols=317 Identities=13% Similarity=0.099 Sum_probs=229.2
Q ss_pred CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610 70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF 147 (430)
Q Consensus 70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~ 147 (430)
.+++|+.|- .+.++.+++++.+.+.+ .. +++.. ....++|+.++++++++++ +++++ +|+++++
T Consensus 26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~--------~y~~~--~~~~~l~~~la~~~~~~~~-~v~~~-~g~~~a~ 91 (381)
T 1v2d_A 26 GAVNLGQGFPSNPPPPFLLEAVRRALGR--QD--------QYAPP--AGLPALREALAEEFAVEPE-SVVVT-SGATEAL 91 (381)
T ss_dssp TCEECCCCSCSSCCCHHHHHHHHHHTTT--SC--------SCCCT--TCCHHHHHHHHHHHTSCGG-GEEEE-SSHHHHH
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHHH--hc--------CCCCC--CCCHHHHHHHHHhcCCChh-hEEEc-CChHHHH
Confidence 345665543 34678999999988753 11 11111 1234788999999999875 67665 8899999
Q ss_pred HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecC--CCCcCCCCCCccccc--cCCCccEEEEeecCCCcc
Q 043610 148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSG--KAEKYTKIPNFDALE--QNPDAKYLHICANETIHG 222 (430)
Q Consensus 148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~--~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG 222 (430)
+.++.+++++||+|++..+++.+.. ..++..| +++.++.. ++ ++ .+|+++++ +++++++|++++++|+||
T Consensus 92 ~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~-~~--~~d~~~l~~~l~~~~~~v~~~~~~nptG 166 (381)
T 1v2d_A 92 YVLLQSLVGPGDEVVVLEPFFDVYL--PDAFLAGAKARLVRLDLTPE-GF--RLDLSALEKALTPRTRALLLNTPMNPTG 166 (381)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECEEETT-EE--ECCHHHHHTTCCTTEEEEEEESSCTTTC
T ss_pred HHHHHHhCCCCCEEEEcCCCchhHH--HHHHHcCCEEEEEeCCCCCc-cC--CcCHHHHHHhcCcCCEEEEECCCCCCCC
Confidence 9999999899999999888877643 3456677 77777764 11 12 46888887 678899999999999999
Q ss_pred ccCC--C---Cccc-cCCCcEEEEeccCcCC---CCccccc----cccEEEeCCCccccCCc--cEEEEEcHHHHhccCC
Q 043610 223 VEFK--E---YPSA-KNSTGILVADMSSNFC---SKPVDVT----RFGVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQD 287 (430)
Q Consensus 223 ~~~p--e---i~~~-~~~g~~lvvD~a~s~G---~~~idl~----~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~ 287 (430)
.++| + |.++ +++|+++++|++|+.+ ..+.++. +.|+++.|+||++|++| +|++++++++++.+..
T Consensus 167 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 246 (381)
T 1v2d_A 167 LVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAG 246 (381)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHH
Confidence 9998 3 4444 5899999999998753 3333333 34689999999999888 8999999887765421
Q ss_pred CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccce
Q 043610 288 KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN 367 (430)
Q Consensus 288 ~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~i 367 (430)
.. . ...++++...++++..+|+......+++.+.++++++++++.+.|++ .|+++.. + .....
T Consensus 247 -------~~---~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~~~~~ 309 (381)
T 1v2d_A 247 -------MR---Q--WTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRA-MGLRVYV--P--EGTYF 309 (381)
T ss_dssp -------HH---H--HHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH-TTCCEEC--C--SBSSE
T ss_pred -------HH---h--hcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHH-CCCEecC--C--CcceE
Confidence 00 0 01246677888888888886532346789999999999999999997 6887653 2 12234
Q ss_pred EEEEcCCCchhHHHHHHHHHcCCeecCCCC------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 368 VPFTLEKSDLEAEFVKEAAKEKMVQLKGHR------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 368 v~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
+.+.+++. + +.+.|.++||.+.+|.. ..+++|||++. +++|++++++.|+++++.
T Consensus 310 ~~~~~~~~--~--~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~--~~~~i~~~~~~l~~~l~~ 370 (381)
T 1v2d_A 310 LMAELPGW--D--AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK--TEEELHLALERLGRVVNS 370 (381)
T ss_dssp EEEECTTC--C--HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS--CHHHHHHHHHHHHHHC--
T ss_pred EEEecChH--h--HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC--CHHHHHHHHHHHHHHHhh
Confidence 55677642 2 66677889999876531 24589999986 899999999999987653
No 59
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.94 E-value=2.2e-25 Score=220.57 Aligned_cols=317 Identities=12% Similarity=0.001 Sum_probs=214.5
Q ss_pred CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc---
Q 043610 78 PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--- 154 (430)
Q Consensus 78 p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl--- 154 (430)
.+++++.|++++.+.+.+.+ ...+ ...+++++.+++++|.+ +++++ +|+|+|++.++.++
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~---------~~~~----~~~~~l~~~la~~~~~~---~v~~~-~ggt~al~~~~~~~~~~ 70 (375)
T 2fnu_A 8 EPCLDKEDKKAVLEVLNSKQ---------LTQG----KRSLLFEEALCEFLGVK---HALVF-NSATSALLTLYRNFSEF 70 (375)
T ss_dssp CCCCCHHHHHHHHHHHTSSC---------CSSS----HHHHHHHHHHHHHHTCS---EEEEE-SCHHHHHHHHHHHSSCC
T ss_pred CCCCCHHHHHHHHHHHHcCc---------ccCC----hHHHHHHHHHHHHhCCC---eEEEe-CCHHHHHHHHHHHhccc
Confidence 45689999999998875311 0112 24668999999999986 67765 78999999999999
Q ss_pred CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCc
Q 043610 155 CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYP 229 (430)
Q Consensus 155 ~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~ 229 (430)
+++||+|++....+.+.. ..++..| +++.++..+ .+ .+|+++++ +++++++|+++|+ ||.+.| +|.
T Consensus 71 ~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~~~~~~---~~-~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~l~~i~ 141 (375)
T 2fnu_A 71 SADRNEIITTPISFVATA--NMLLESGYTPVFAGIKN---DG-NIDELALEKLINERTKAIVSVDY---AGKSVEVESVQ 141 (375)
T ss_dssp CTTSCEEEECSSSCTHHH--HHHHHTTCEEEECCBCT---TS-SBCGGGSGGGCCTTEEEEEEECG---GGCCCCHHHHH
T ss_pred CCCCCEEEECCCccHhHH--HHHHHCCCEEEEeccCC---CC-CCCHHHHHhhcCcCceEEEEeCC---cCCccCHHHHH
Confidence 889999998777776653 2345567 777776643 23 57888887 6788999888876 899999 788
Q ss_pred cc-cCCCcEEEEeccCcCCCCccc--cccc-cEE--EeCCCccccCCccEEEEEc--HHHHhccCCCCCccc----cccc
Q 043610 230 SA-KNSTGILVADMSSNFCSKPVD--VTRF-GVI--YAGAQKNVGPSGVTIVIVR--KDLLGNAQDKTPLML----DYKI 297 (430)
Q Consensus 230 ~~-~~~g~~lvvD~a~s~G~~~id--l~~~-d~~--~~s~~K~~gp~G~g~l~v~--~~~~~~~~~~~p~~~----~~~~ 297 (430)
++ +++|+++++|++|++|..+.+ +..+ |+. .+++||++|+ |+|+++++ +++++.+.+...... .+..
T Consensus 142 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~K~~~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (375)
T 2fnu_A 142 KLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPITT-AEGGAVVTNDSELHEKMKLFRSHGMLKKDFFEG 220 (375)
T ss_dssp HHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHHHHTBTTEEESSSSCE
T ss_pred HHHHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCCCCCccc-cCceEEEeCCHHHHHHHHHHHhcCCcccccccc
Confidence 86 688999999999999876533 3333 444 5556699998 99999985 566655432110000 0000
Q ss_pred h-hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCC-CCCCccceEEEEcCCC
Q 043610 298 H-DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVE-KSVRSFMNVPFTLEKS 375 (430)
Q Consensus 298 ~-~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~-~~~rs~~iv~f~~~~~ 375 (430)
. ...+...+..+... ..++ .. ..+++++.++.+++++++++.|.+..|+++.... ....+..++.+.++..
T Consensus 221 ~~~~~~~~~~~~~~~~----a~~~--~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (375)
T 2fnu_A 221 EVKSIGHNFRLNEIQS----ALGL--SQ-LKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQK 293 (375)
T ss_dssp EESSCCCBCCCCHHHH----HHHH--HH-HTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGG
T ss_pred ccccccccCCCCHHHH----HHHH--HH-HHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCcc
Confidence 0 00011111112111 1122 11 2378899999999999999999975588775421 1122334445666532
Q ss_pred ch-hH-HHHHHHHHcCCeecCCCCC-----------------------CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 376 DL-EA-EFVKEAAKEKMVQLKGHRS-----------------------VGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 376 ~~-~~-~~~~~L~~~Gi~~~~g~~~-----------------------~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
+. +. ++.+.|.++||.+..+... .+.+||+++.+++++|+++++++|++++++
T Consensus 294 ~~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~ 371 (375)
T 2fnu_A 294 FFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFES 371 (375)
T ss_dssp GGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHH
Confidence 22 33 7999999999987622110 146999999999999999999999998765
No 60
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.94 E-value=2.8e-25 Score=224.94 Aligned_cols=326 Identities=12% Similarity=0.087 Sum_probs=229.9
Q ss_pred CCCceeecCCC------CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC-----CCCCcEE
Q 043610 68 EDRVFNFAAGP------ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN-----IPQEYSV 136 (430)
Q Consensus 68 ~~~~~l~~~gp------~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g-----~~~~~~v 136 (430)
.+.+++|+.|- .++++.|++++.+.+.+....+. .+. ....++|+.++++++ ++++ +|
T Consensus 53 ~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y--------~~~--~g~~~lr~~la~~~~~~~~~~~~~-~v 121 (427)
T 3dyd_A 53 NKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGY--------APS--IGFLSSREEIASYYHCPEAPLEAK-DV 121 (427)
T ss_dssp TSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSC--------CCT--TCCHHHHHHHHHHHCBTTBCCCGG-GE
T ss_pred CCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCC--------CCC--CCcHHHHHHHHHHHhhcCCCCChH-HE
Confidence 34567776543 37899999999988764211111 110 113477889999998 5554 67
Q ss_pred EEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEE
Q 043610 137 LFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLH 213 (430)
Q Consensus 137 v~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~ 213 (430)
+++ +|+|+|++.++..+.++||+|++..+++.++. ..++..| +++.++...+ .+..+|+++++ +++++++|+
T Consensus 122 ~~t-~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~l~~~~~~v~ 196 (427)
T 3dyd_A 122 ILT-SGCSQAIDLCLAVLANPGQNILVPRPGFSLYK--TLAESMGIEVKLYNLLPE--KSWEIDLKQLEYLIDEKTACLI 196 (427)
T ss_dssp EEE-SSHHHHHHHHHHHHCCTTCEEEEEESCCTHHH--HHHHHTTCEEEEEEEEGG--GTTEECHHHHHSSCCTTEEEEE
T ss_pred EEe-cCcHHHHHHHHHHhcCCCCEEEEcCCCchhHH--HHHHHcCCEEEEEecccc--cCCCCCHHHHHHHhccCCCEEE
Confidence 765 78999999999999999999998888876643 4566678 7777776432 22246888887 678899999
Q ss_pred EeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCC----CCccccccc--c---EEEeCCCccccCCc--cEEEE
Q 043610 214 ICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFC----SKPVDVTRF--G---VIYAGAQKNVGPSG--VTIVI 276 (430)
Q Consensus 214 i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G----~~~idl~~~--d---~~~~s~~K~~gp~G--~g~l~ 276 (430)
+++++|+||.++| + |.++ +++|+++++|++|+.. .....+..+ + +++.|++|.+|++| +|+++
T Consensus 197 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~ 276 (427)
T 3dyd_A 197 VNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWIL 276 (427)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEE
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEE
Confidence 9999999999999 3 4444 5899999999998752 222333333 2 66789999998778 89999
Q ss_pred EcH-------HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610 277 VRK-------DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG 349 (430)
Q Consensus 277 v~~-------~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~ 349 (430)
+++ ++++.+.. + .. ..++++...++++..+|+... ...++++.++++++++++++.|++
T Consensus 277 ~~~~~~~~~~~i~~~l~~-------~---~~---~~~~~~~~~~~a~~~~L~~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 342 (427)
T 3dyd_A 277 IHDRRDIFGNEIRDGLVK-------L---SQ---RILGPCTIVQGALKSILCRTP-GEFYHNTLSFLKSNADLCYGALAA 342 (427)
T ss_dssp EECSTTSSHHHHHHHHHH-------H---HH---HHCCSCHHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCcchhhHHHHHHHHHH-------H---Hh---ccCCCCHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 874 44433211 0 00 124778888888888887422 235788899999999999999997
Q ss_pred cCCceecCCCCCCCccceEEEEcCC-----CchhHHHHHHH-HHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHH
Q 043610 350 SNGFYKCPVEKSVRSFMNVPFTLEK-----SDLEAEFVKEA-AKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAF 421 (430)
Q Consensus 350 ~~G~~~~~~~~~~rs~~iv~f~~~~-----~~~~~~~~~~L-~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~ 421 (430)
.+|+.+.. + ...+.+.+.++. .....+++++| +++||.+.+|.. ..+++||++. +++++++++++.
T Consensus 343 ~~g~~~~~--p--~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~--~~~e~i~~~l~~ 416 (427)
T 3dyd_A 343 IPGLRPVR--P--SGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVIT--VPEVMMLEACSR 416 (427)
T ss_dssp STTEEEEC--C--SBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESC--SCHHHHHHHHHH
T ss_pred CCCceecC--C--CeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEEC--CCHHHHHHHHHH
Confidence 55887642 1 122334445541 11233788887 578999887642 3468999986 689999999999
Q ss_pred HHHHHHhh
Q 043610 422 MKDFQAKH 429 (430)
Q Consensus 422 L~~~~~~~ 429 (430)
|+++++++
T Consensus 417 l~~~l~~~ 424 (427)
T 3dyd_A 417 IQEFCEQH 424 (427)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998875
No 61
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.94 E-value=2e-25 Score=222.01 Aligned_cols=319 Identities=11% Similarity=0.062 Sum_probs=222.0
Q ss_pred CCCceeecCCC--C-CCcHHHHHHHHHHhhhcc-CCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH
Q 043610 68 EDRVFNFAAGP--A-NLPEKVLLKAQSELYNWR-GSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA 143 (430)
Q Consensus 68 ~~~~~l~~~gp--~-~~~~~V~~a~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga 143 (430)
.+.+++|+.|- . +.++.+++++.+.+.++. +.+.+.+ .. ......+++++.+++++|.+ +.+++ ++|
T Consensus 38 g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~---~~--g~~~~~~~l~~~la~~~g~~---~~i~~-~sG 108 (384)
T 1bs0_A 38 DRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGH---VS--GYSVVHQALEEELAEWLGYS---RALLF-ISG 108 (384)
T ss_dssp TEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTT---TT--CCCHHHHHHHHHHHHHHTCS---EEEEE-SCH
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCc---cc--CChHHHHHHHHHHHHHhCCC---cEEEe-CCc
Confidence 34466777754 2 478899999999886532 1111111 01 11245678999999999985 45665 456
Q ss_pred HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC---CccEEEEeec
Q 043610 144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP---DAKYLHICAN 217 (430)
Q Consensus 144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~---~~~lv~i~~~ 217 (430)
|+++..++..+.++||.|++..+. |+. ....++..| +++.++. .|+++++ +++ ++++|+++++
T Consensus 109 t~a~~~~~~~~~~~gd~v~~~~~~-~~~-~~~~~~~~g~~~~~~~~---------~d~~~l~~~l~~~~~~~~~v~~~~~ 177 (384)
T 1bs0_A 109 FAANQAVIAAMMAKEDRIAADRLS-HAS-LLEAASLSPSQLRRFAH---------NDVTHLARLLASPCPGQQMVVTEGV 177 (384)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETTC-CHH-HHHHHHTSSSEEEEECT---------TCHHHHHHHHHSCCSSCEEEEEESB
T ss_pred HHHHHHHHHHhCCCCcEEEEcccc-cHH-HHHHHHHcCCCEEEeCC---------CCHHHHHHHHHhcCCCCeEEEEeCC
Confidence 999999999888999988755444 432 223344556 5555542 3556665 332 4789999999
Q ss_pred CCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc-----c-c-c-ccccEEEeCCCccccCCccEEEEEcHHHHhccC
Q 043610 218 ETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP-----V-D-V-TRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQ 286 (430)
Q Consensus 218 ~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~-----i-d-l-~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~ 286 (430)
+|+||.+.| +|.++ +++|+++++|++|+.|... + + + ...|+++.|+||++||+| |++++++++++.+.
T Consensus 178 ~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G-G~~~~~~~~~~~l~ 256 (384)
T 1bs0_A 178 FSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSG-AAVLCSSTVADYLL 256 (384)
T ss_dssp CTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCC-EEEEECHHHHHHHH
T ss_pred CCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhhccC-cEEEeCHHHHHHHH
Confidence 999999999 78776 6899999999999877531 1 1 1 123799999999999999 99999998877643
Q ss_pred CCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccc
Q 043610 287 DKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFM 366 (430)
Q Consensus 287 ~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~ 366 (430)
.... .| ...++++...+.++..+++.+.+ ++.+.+.++++++++++++.|++ .|+++.+ ..+ .
T Consensus 257 ~~~~---~~-------~~~~~~~~~~~~~~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~----~~~-~ 319 (384)
T 1bs0_A 257 QFAR---HL-------IYSTSMPPAQAQALRASLAVIRS-DEGDARREKLAALITRFRAGVQD-LPFTLAD----SCS-A 319 (384)
T ss_dssp HHCH---HH-------HSSBCCCHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHTT-SSCEECS----CCS-S
T ss_pred Hhch---hh-------hcCCCCCHHHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHHh-cCCcccC----CCC-C
Confidence 2110 01 01125777888888888987652 13578899999999999999987 5877652 123 2
Q ss_pred eEEEEcCCCchhH-HHHHHHHHcCCeecCCCC-----CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610 367 NVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHR-----SVGGMRASIYNAMPLAGVEKLVAFMKDF 425 (430)
Q Consensus 367 iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~-----~~g~iRis~~~~~t~edv~~ll~~L~~~ 425 (430)
.+.+.+++ +.+. ++.+.|.++||.+.++.. ..+.+||+++.+++++|+++++++|+++
T Consensus 320 ~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 320 IQPLIVGD-NSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp BCCEEEES-HHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEeCC-HHHHHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 34466653 2233 788999889999876432 1257999999999999999999999875
No 62
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.94 E-value=1.3e-25 Score=223.79 Aligned_cols=328 Identities=13% Similarity=0.115 Sum_probs=223.1
Q ss_pred CCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcH
Q 043610 68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGA 143 (430)
Q Consensus 68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~ga 143 (430)
.+.+++|+.|- .+.++.+++++.+.+.+ +...|.. .....+..+.+.+.+.+.+|. +++ +|+++ +|+
T Consensus 29 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~----~~~~y~~---~~g~~~l~~~la~~~~~~~g~~~~~~-~v~~~-~g~ 99 (388)
T 1j32_A 29 GIDVCSFSAGEPDFNTPKHIVEAAKAALEQ----GKTRYGP---AAGEPRLREAIAQKLQRDNGLCYGAD-NILVT-NGG 99 (388)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHHT----TCCSCCC---TTCCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SHH
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHhc----CCCCCCC---CCCCHHHHHHHHHHHHHhcCCCCChh-hEEEc-CCH
Confidence 34556665553 34678999999887753 1111111 111334445566666666675 343 67765 889
Q ss_pred HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610 144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI 220 (430)
Q Consensus 144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~ 220 (430)
+++++.++.+++++||+|++..+++.+.. ..++..| +++.++...+ .+..+|+++++ +++++++|++++++|+
T Consensus 100 ~~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~v~~~~p~np 175 (388)
T 1j32_A 100 KQSIFNLMLAMIEPGDEVIIPAPFWVSYP--EMVKLAEGTPVILPTTVE--TQFKVSPEQIRQAITPKTKLLVFNTPSNP 175 (388)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESSCCTHHH--HHHHHTTCEEEEECCCGG--GTTCCCHHHHHHHCCTTEEEEEEESSCTT
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCChhHH--HHHHHcCCEEEEecCCcc--cCCCCCHHHHHHhcCcCceEEEEeCCCCC
Confidence 99999999999999999998887776643 4456677 7777776431 12347888887 7788999999999999
Q ss_pred ccccCC-----CCccc-cCCCcEEEEeccCcCCCC----c---ccc----ccccEEEeCCCccccCCc--cEEEEEcHHH
Q 043610 221 HGVEFK-----EYPSA-KNSTGILVADMSSNFCSK----P---VDV----TRFGVIYAGAQKNVGPSG--VTIVIVRKDL 281 (430)
Q Consensus 221 tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~----~---idl----~~~d~~~~s~~K~~gp~G--~g~l~v~~~~ 281 (430)
||.++| +|.++ +++|+++++|++|+.+.. . ..+ ...++++.|+||++|++| +|++++++++
T Consensus 176 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~ 255 (388)
T 1j32_A 176 TGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPL 255 (388)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHH
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHHH
Confidence 999987 34454 588999999999875432 1 122 223689999999999889 9999999988
Q ss_pred HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 043610 282 LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS 361 (430)
Q Consensus 282 ~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~ 361 (430)
++.+... ..... .+++...++++..+|+.. ...++.+.++++++++++.+.|++..|+++.. +
T Consensus 256 ~~~l~~~-----------~~~~~-~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~- 318 (388)
T 1j32_A 256 VKAATKI-----------QGHST-SNVCTFAQYGAIAAYENS--QDCVQEMLAAFAERRRYMLDALNAMPGLECPK--P- 318 (388)
T ss_dssp HHHHHHH-----------HHTTT-CSCCHHHHHHHHHHHHSC--SHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCC--C-
T ss_pred HHHHHHH-----------Hhhcc-cCCCHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHhhCCCCcccC--C-
Confidence 7754220 00111 234555666666666532 12467888999999999999999744776643 1
Q ss_pred CCccceEEEEcCCCchh-HHHHHHHHH-cCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 362 VRSFMNVPFTLEKSDLE-AEFVKEAAK-EKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 362 ~rs~~iv~f~~~~~~~~-~~~~~~L~~-~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
.....+.+.++..+.+ .++.+.|.+ +||.+.+|.. ..+++|||++ +++++++++++.|++++++
T Consensus 319 -~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~i~~~~~~l~~~l~~ 386 (388)
T 1j32_A 319 -DGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA--TDLDTIKRGMERLEKFLHG 386 (388)
T ss_dssp -CBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred -CeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 1223333444420122 378888875 7999877532 2468999997 5899999999999998765
No 63
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.94 E-value=3.4e-26 Score=229.11 Aligned_cols=331 Identities=12% Similarity=0.093 Sum_probs=227.5
Q ss_pred CceeecCC---CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCcHH
Q 043610 70 RVFNFAAG---PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--QEYSVLFLQGGAT 144 (430)
Q Consensus 70 ~~~l~~~g---p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~gaT 144 (430)
.+++|+.| |.+.++.|++++.+.+.+....+ |.. .....+..+++++.+++++|.+ ++.+++++ +|++
T Consensus 40 ~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~---y~~---~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~-~g~~ 112 (407)
T 3nra_A 40 RPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQA---YTE---YRGDLGIRDLLAPRLAAFTGAPVDARDGLIIT-PGTQ 112 (407)
T ss_dssp CCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHH---SCC---TTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEE-SHHH
T ss_pred ceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCC---cCC---CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEe-CCcH
Confidence 36777653 34688899999998876421101 101 1223456678889999999984 21267775 8999
Q ss_pred HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCC--CcCCCCCCccccc--cCCCccEEEEeecCC
Q 043610 145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKA--EKYTKIPNFDALE--QNPDAKYLHICANET 219 (430)
Q Consensus 145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~--~~~g~~~d~~~l~--i~~~~~lv~i~~~~t 219 (430)
++++.++.+++++||+|++..+.+.+. ...++..| +++.++.... .+.+..+|+++++ +.+++++|++++++|
T Consensus 113 ~a~~~~~~~l~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~n 190 (407)
T 3nra_A 113 GALFLAVAATVARGDKVAIVQPDYFAN--RKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNN 190 (407)
T ss_dssp HHHHHHHHTTCCTTCEEEEEESCCTHH--HHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCT
T ss_pred HHHHHHHHHhCCCCCEEEEcCCcccch--HHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCC
Confidence 999999999999999999888877764 34566677 7777776310 0012347888887 667899999999999
Q ss_pred CccccCC--C---Cccc-cCCCcEEEEeccCcCCC----Ccccccc-----c--cEEEeCCCccccCCc--cEEEEEcHH
Q 043610 220 IHGVEFK--E---YPSA-KNSTGILVADMSSNFCS----KPVDVTR-----F--GVIYAGAQKNVGPSG--VTIVIVRKD 280 (430)
Q Consensus 220 ~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~~idl~~-----~--d~~~~s~~K~~gp~G--~g~l~v~~~ 280 (430)
+||.++| + |.++ +++|+++++|++|+.+. ....+.. . ++++.|++|++|++| +|+++.+++
T Consensus 191 ptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~ 270 (407)
T 3nra_A 191 PAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRA 270 (407)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHH
T ss_pred CCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHH
Confidence 9999999 3 4444 58899999999998632 2222221 2 388999999999777 799999998
Q ss_pred HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC
Q 043610 281 LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK 360 (430)
Q Consensus 281 ~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~ 360 (430)
+++.+.... . ....+++...++++..+|+.. ...+++..++++++++++++.|++..|+.+.. +
T Consensus 271 ~~~~l~~~~----------~--~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~ 334 (407)
T 3nra_A 271 IIARMEKLQ----------A--IVSLRAAGYSQAVLRGWFDEA--PGWMEDRIARHQAIRDELLHVLRGCEGVFART--P 334 (407)
T ss_dssp HHHHHHHHH----------H--HHTSSSCHHHHGGGGGTTCCC--TTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCC--C
T ss_pred HHHHHHHHH----------h--hhccCCChHHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHHhcCCCceecc--C
Confidence 877643200 0 011244556666666565421 12467888999999999999999755776642 1
Q ss_pred CCCccceEEEEcCCCchhH-HHHHHHHH-cCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 361 SVRSFMNVPFTLEKSDLEA-EFVKEAAK-EKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 361 ~~rs~~iv~f~~~~~~~~~-~~~~~L~~-~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
.....+.+.++..+.+. ++.+.|.+ +||.+.+|.. ..+++|||++. ++++|+++++.|++++++.
T Consensus 335 --~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 335 --QAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ--DHEAAVAAARRIVTLVERY 405 (407)
T ss_dssp --SBSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS--CHHHHHHHHHHHHHHHHHH
T ss_pred --CeeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC--CHHHHHHHHHHHHHHHHHh
Confidence 12223445555422333 78888865 6999876532 24579999985 8999999999999988753
No 64
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.94 E-value=6.3e-26 Score=222.73 Aligned_cols=317 Identities=17% Similarity=0.114 Sum_probs=218.7
Q ss_pred CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH
Q 043610 70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA 149 (430)
Q Consensus 70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~ 149 (430)
.+++.+.+++++++.|++++.+.+..+. .+ ....+..+++++.+++++|.+++ +++++ +|+|++++.
T Consensus 15 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~--------~~---~g~~~~~~~~~~~l~~~~g~~~~-~v~~~-~g~t~a~~~ 81 (359)
T 1svv_A 15 PYSFVNDYSVGMHPKILDLMARDNMTQH--------AG---YGQDSHCAKAARLIGELLERPDA-DVHFI-SGGTQTNLI 81 (359)
T ss_dssp CEECSCSCSSCCCHHHHHHHHHHTTCCC--------CS---TTCSHHHHHHHHHHHHHHTCTTS-EEEEE-SCHHHHHHH
T ss_pred eEEecCCCcCCCCHHHHHHHHHHHhhcc--------cc---ccccHHHHHHHHHHHHHhCCCCc-cEEEe-CCchHHHHH
Confidence 5666666667889999999998875311 11 11235567899999999998775 77765 789999999
Q ss_pred HHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCC-------ccEEEEeecCC
Q 043610 150 VPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPD-------AKYLHICANET 219 (430)
Q Consensus 150 ~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~-------~~lv~i~~~~t 219 (430)
++..+.++||+|++..+++.+......++..| +++.++.. ++ .+|+++++ ++++ +++|+++++ |
T Consensus 82 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~--~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ 155 (359)
T 1svv_A 82 ACSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP---DG--KLRVADIESALHENRSEHMVIPKLVYISNT-T 155 (359)
T ss_dssp HHHHHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TS--CCCHHHHHHHHHHSCSTTSCEEEEEEEESS-C
T ss_pred HHHHHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CC--eecHHHHHHHHHHHHhccCCCceEEEEEcC-C
Confidence 99999889999998877776653211245667 87777763 12 47888887 5443 899999998 7
Q ss_pred CccccCC--C---Cccc-cCCCcEEEEeccC---cCCCCccccc------cccEEEeCCCccccCCccEEEEEcHHHHhc
Q 043610 220 IHGVEFK--E---YPSA-KNSTGILVADMSS---NFCSKPVDVT------RFGVIYAGAQKNVGPSGVTIVIVRKDLLGN 284 (430)
Q Consensus 220 ~tG~~~p--e---i~~~-~~~g~~lvvD~a~---s~G~~~idl~------~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~ 284 (430)
+||.++| + |.++ +++|+++++|++| ++|..+.+.. ..|+++.++||+.+|.|+|++++++++++.
T Consensus 156 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~~~~~g~l~~~~~~~~~ 235 (359)
T 1svv_A 156 EVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFGEALIILNDALKPN 235 (359)
T ss_dssp TTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTCSSCEEEEECSGGGCTT
T ss_pred CCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCCCCceEEEEEcccHHHH
Confidence 8999998 3 4444 5889999999998 6676655443 237899999999779999999999888665
Q ss_pred cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610 285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS 364 (430)
Q Consensus 285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs 364 (430)
+.+ ... ..+... +.+.....++..+ +. ..+++++.++++++++++++.|+ ..|+++.. + ..+
T Consensus 236 ~~~----~~~-----~~~~~~-~~~~~~~~~~~~~---l~-~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~--~-~~~ 297 (359)
T 1svv_A 236 ARH----LIK-----QRGALM-AKGWLLGIQFEVL---MK-DNLFFELGAHSNKMAAILKAGLE-ACGIRLAW--P-SAS 297 (359)
T ss_dssp HHH----HHH-----HTTCCC-TTTHHHHHHHHHH---TS-TTHHHHHHHHHHHHHHHHHHHHH-HTTCCBSS--C-CSS
T ss_pred HHH----HHh-----cCCccc-ccchhhHHHHHHH---Hh-hhhHHHHHHHHHHHHHHHHHHhc-cCCeEEcc--C-Ccc
Confidence 321 000 011111 1122222222222 22 34578899999999999999994 57887653 1 122
Q ss_pred cceEEEEcCCCchhHHHHHHHHHc-CCeecCCC-CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 365 FMNVPFTLEKSDLEAEFVKEAAKE-KMVQLKGH-RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 365 ~~iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~-~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
..+.+.++ .++.++|.++ ||.+.... ...+++||+++.+++++|+++++++|++++++.
T Consensus 298 -~~~~~~~~-----~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 298 -NQLFPILE-----NTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp -SEECBEEE-----HHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred -ceEEEEcC-----HHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 23334433 3688889888 99984311 123479999988899999999999999987653
No 65
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.94 E-value=5.2e-25 Score=223.73 Aligned_cols=299 Identities=11% Similarity=0.013 Sum_probs=207.7
Q ss_pred cHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCCCCcEEEEeCChhHHH--HHHHHHHhC-CceE
Q 043610 110 GKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQV 185 (430)
Q Consensus 110 ~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~ 185 (430)
++.+.+.++++++.+++++|.+++ ++++ +.|+|.+++++...+ +++||+|++....|.+.. |...++..| +++.
T Consensus 103 ~~g~~~~~~~~~~~la~~~g~~~~-~i~~-~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~ 180 (438)
T 1wyu_A 103 SQGVLQATFEYQTMIAELAGLEIA-NASM-YDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLT 180 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSSEE-CSCB-SSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred hhhHHHHHHHHHHHHHHHhCCCcc-ceEE-eCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEE
Confidence 567788899999999999999764 5555 477885555554443 478999998777776542 333455678 7777
Q ss_pred EecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEecc-CcCCCCccccccc--cEE
Q 043610 186 IWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMS-SNFCSKPVDVTRF--GVI 259 (430)
Q Consensus 186 v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a-~s~G~~~idl~~~--d~~ 259 (430)
++. + .+ .+|+++ ++++|++|+++|+ |+||.+.| +|.++ +++|+++++|+. +++|..+.+ .++ |++
T Consensus 181 v~~-~---~~-~~d~~~--i~~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~-~~~g~D~~ 251 (438)
T 1wyu_A 181 LPL-E---GG-RTPLPE--VGEEVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPP-GAYGADIA 251 (438)
T ss_dssp ECC-B---TT-BCCCCC--CCTTEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCH-HHHTCSEE
T ss_pred EcC-c---CC-ccCHHH--hCCCeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCC-ccCCCCEE
Confidence 775 2 23 466666 6789999999998 99999999 78886 789999998865 667765443 333 789
Q ss_pred EeCCCc-----cc-cCCccEEEEEcHHHHhccCCCCC-----------ccccccchhh-cCCCCCCccH---HHHHHHHH
Q 043610 260 YAGAQK-----NV-GPSGVTIVIVRKDLLGNAQDKTP-----------LMLDYKIHDE-NNSLYNTPPC---YCIYMCGL 318 (430)
Q Consensus 260 ~~s~~K-----~~-gp~G~g~l~v~~~~~~~~~~~~p-----------~~~~~~~~~~-~~~~~~T~~~---~~~~a~~~ 318 (430)
++|+|| |+ || |+|++++++++++.+....- +.+++..... .....+|+|+ ..+.++.+
T Consensus 252 ~~s~kk~~~~~~~~Gp-~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~a 330 (438)
T 1wyu_A 252 VGDGQSLGLPMGFGGP-HFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMG 330 (438)
T ss_dssp EEECTTTTCCCGGGCS-CCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHH
T ss_pred EECCcccCCCccCCCC-CeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHH
Confidence 988888 67 57 99999999998776532110 0111100000 0011245544 34444444
Q ss_pred H--HHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCee--cC
Q 043610 319 V--FEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQ--LK 394 (430)
Q Consensus 319 a--l~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~--~~ 394 (430)
+ ++.+.+ .|++++.+++.+++++++++|++..|+++.. +.. ....+.|.++. ...++.++|.++||.+ .+
T Consensus 331 a~~l~~~~~-~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~--~~~~~~~~~~~--~~~~~~~~L~~~gi~v~~~~ 404 (438)
T 1wyu_A 331 AMYLAALGP-EGLREVALKSVEMAHKLHALLLEVPGVRPFT-PKP--FFNEFALALPK--DPEAVRRALAERGFHGATPV 404 (438)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTCEECS-CSS--BCSEEEEECSS--CHHHHHHHHHHTTCCCCEEC
T ss_pred HHHHHHhCH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEECC-CCC--eEEEEEEeCCC--CHHHHHHHHHHCCceecccc
Confidence 4 665553 4789999999999999999999755998864 211 11234555541 2337999999999987 44
Q ss_pred CC-CCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610 395 GH-RSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 395 g~-~~~g~iRis~~~~~t~edv~~ll~~L~~~~ 426 (430)
+. ...+.+|||++.+++++|+++++++|++++
T Consensus 405 ~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 405 PREYGENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp CTTSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred ccccCCCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 43 225689999999999999999999999864
No 66
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.94 E-value=3.9e-25 Score=222.12 Aligned_cols=325 Identities=12% Similarity=0.061 Sum_probs=225.7
Q ss_pred CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCc--HHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCc
Q 043610 69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRG--KEFKSIIEKAESDLRALLNIP--QEYSVLFLQGG 142 (430)
Q Consensus 69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~--~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~g 142 (430)
+++++|+.|- .+.++.|++++.+.+.+.. ...+. ....+..+.+.+.+++.+|.+ ++++|+++ +|
T Consensus 47 ~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t-~G 117 (404)
T 2o1b_A 47 LPLINMAVGIPDGPTPQGIIDHFQKALTIPE--------NQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCIL-YG 117 (404)
T ss_dssp SCCEECCCCSCSSCCCHHHHHHHHHHTTCHH--------HHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEE-SS
T ss_pred CCEEecCCcCCCCCCCHHHHHHHHHHHhCCC--------CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEc-CC
Confidence 4466776664 3457899999988774210 11111 122333334444444444975 21267765 78
Q ss_pred HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCC
Q 043610 143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANET 219 (430)
Q Consensus 143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t 219 (430)
++++++.++..++++||+|++..+++.+.. ..++..| +++.++... .+..+|+++++ +++++++|++++++|
T Consensus 118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~v~~~~---~~~~~d~~~l~~~l~~~~~~v~l~~p~n 192 (404)
T 2o1b_A 118 TKNGLVAVPTCVINPGDYVLLPDPGYTDYL--AGVLLADGKPVPLNLEP---PHYLPDWSKVDSQIIDKTKLIYLTYPNN 192 (404)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCSSHH--HHHHHTTCEEEEEECCT---TTCCCCGGGSCHHHHHHEEEEEECSSCT
T ss_pred cHHHHHHHHHHhcCCCCEEEEcCCCchhHH--HHHHHCCCEEEEeccCc---ccCcCCHHHHHHhhccCceEEEEcCCCC
Confidence 999999999999899999999888877643 3455677 777777642 23346888887 667899999999999
Q ss_pred CccccCC--C---Cccc-cCCCcEEEEeccCcCCC---Ccccccc------ccEEEeCCCccccCCc--cEEEEEcHHHH
Q 043610 220 IHGVEFK--E---YPSA-KNSTGILVADMSSNFCS---KPVDVTR------FGVIYAGAQKNVGPSG--VTIVIVRKDLL 282 (430)
Q Consensus 220 ~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~---~~idl~~------~d~~~~s~~K~~gp~G--~g~l~v~~~~~ 282 (430)
+||.++| + |.++ +++|+++++|++|+.+. .+.++.+ .++++.|++|++|++| +|+++++++++
T Consensus 193 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~ 272 (404)
T 2o1b_A 193 PTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMI 272 (404)
T ss_dssp TTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHH
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHHH
Confidence 9999998 3 4454 68999999999988643 2233322 2488999999999778 79999999887
Q ss_pred hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610 283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV 362 (430)
Q Consensus 283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~ 362 (430)
+.+.... . ...++++...++++..+|+... ..++.++++++++++++.+.|++ .|+.+.. +
T Consensus 273 ~~l~~~~----------~--~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~-- 333 (404)
T 2o1b_A 273 QALKKYQ----------T--HTNAGMFGALQDAAIYALNHYD--DFLEEQSNVFKTRRDRFEAMLAK-ADLPFVH--A-- 333 (404)
T ss_dssp HHHHHHH----------H--HHCCCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHH-TTCCEEC--C--
T ss_pred HHHHHHH----------h--hccCCCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHh-cCCeecC--C--
Confidence 7643200 0 0124677788888888887532 25788899999999999999997 4776643 1
Q ss_pred CccceEEEEcCCCchhH-HHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 363 RSFMNVPFTLEKSDLEA-EFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 363 rs~~iv~f~~~~~~~~~-~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
.++..+.+.+++ +.+. ++.+.|. ++||.+.+|.. ..+++|||++. ++++++++++.|+++++++
T Consensus 334 ~~g~~~~~~~~~-~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~--~~e~l~~~l~~l~~~l~~~ 403 (404)
T 2o1b_A 334 KGGIYVWLETPP-GYDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL--DDQKLDEAAIRLTELAYLY 403 (404)
T ss_dssp CBSSEEEEECCT-TCCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS--CTTHHHHHHHHHHGGGGGG
T ss_pred CcceEEEEeCCC-CCCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC--CHHHHHHHHHHHHHHHHhh
Confidence 233345667764 2233 6888876 57999877632 14589999986 7889999999999887764
No 67
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.94 E-value=1.1e-25 Score=227.34 Aligned_cols=327 Identities=12% Similarity=0.065 Sum_probs=231.1
Q ss_pred CCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCcH
Q 043610 68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGGA 143 (430)
Q Consensus 68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~ga 143 (430)
.++++.|..|. .+.++.|++++.+.+... . ..+.....+..+++++.+++.+| ++++ +|+++ +|+
T Consensus 60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~----~-----~~y~~~~~~l~~~l~~~l~~~~g~~~~~~-~v~~~-~g~ 128 (421)
T 3l8a_A 60 NPELLQMWVADMDFLPVPEIKEAIINYGREH----I-----FGYNYFNDDLYQAVIDWERKEHDYAVVKE-DILFI-DGV 128 (421)
T ss_dssp CTTCEECCSSCCCSCCCHHHHHHHHHHHHHC----C-----SSCBCCCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SCH
T ss_pred CCCeeecccCCCCCCCCHHHHHHHHHHHhcC----C-----cCCCCCCHHHHHHHHHHHHHHhCCCCCHH-HEEEc-CCH
Confidence 45677776654 457899999999987641 1 11111114566788899999999 4454 67764 889
Q ss_pred HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEeecCC
Q 043610 144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHICANET 219 (430)
Q Consensus 144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~~~~t 219 (430)
++|++.++..+.++||+|++..+.+.+. ...++..| +++.++.... +.+..+|+++|+ ++ +++++|++++++|
T Consensus 129 ~ea~~~a~~~~~~~gd~Vi~~~~~y~~~--~~~~~~~g~~~~~~~~~~~-~~~~~~d~~~le~~i~~~~~~~vil~~p~n 205 (421)
T 3l8a_A 129 VPAISIALQAFSEKGDAVLINSPVYYPF--ARTIRLNDHRLVENSLQII-NGRFEIDFEQLEKDIIDNNVKIYLLCSPHN 205 (421)
T ss_dssp HHHHHHHHHHHSCTEEEEEEEESCCHHH--HHHHHHTTEEEEEEECEEE-TTEEECCHHHHHHHHHHTTEEEEEEESSBT
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCcHHH--HHHHHHCCCEEEecccccc-CCCeeeCHHHHHHHhhccCCeEEEECCCCC
Confidence 9999999999999999999888877664 34556677 7777776411 011236888887 55 7999999999999
Q ss_pred CccccCC-----CCccc-cCCCcEEEEeccCcCCC----Ccccc-------ccccEEEeCCCccccCCc--cEEEEEc-H
Q 043610 220 IHGVEFK-----EYPSA-KNSTGILVADMSSNFCS----KPVDV-------TRFGVIYAGAQKNVGPSG--VTIVIVR-K 279 (430)
Q Consensus 220 ~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~----~~idl-------~~~d~~~~s~~K~~gp~G--~g~l~v~-~ 279 (430)
++|.+.+ +|.++ +++|+++++|++|+... ....+ .+..+++.|++|++|++| +|+++++ +
T Consensus 206 ptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~ 285 (421)
T 3l8a_A 206 PGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNE 285 (421)
T ss_dssp TTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSH
T ss_pred CCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCH
Confidence 9999987 35554 58899999999987532 11122 222378999999999777 5999998 7
Q ss_pred HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCC
Q 043610 280 DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVE 359 (430)
Q Consensus 280 ~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~ 359 (430)
++.+.+.+. . .....+++|..++.++.++++... ..++++.++.+++++++++.|++.+|+.+..
T Consensus 286 ~l~~~~~~~----------~-~~~~~~~~n~~~~~a~~aal~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~-- 350 (421)
T 3l8a_A 286 SLRRKFQYR----------Q-LANNQHEVPTVGMIATQAAFQYGK--PWLEELKTVIEGNIKLVIKELEAKTKIKVME-- 350 (421)
T ss_dssp HHHHHHHHH----------H-HHTTCSCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHHCSCEEEC--
T ss_pred HHHHHHHHH----------H-HhcccCCCCHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHHHHhCCCceEeC--
Confidence 776653210 0 011235788889999998987533 2478899999999999999998755777653
Q ss_pred CCCCccceEEEEcCCCchhH-HHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610 360 KSVRSFMNVPFTLEKSDLEA-EFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 360 ~~~rs~~iv~f~~~~~~~~~-~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~ 427 (430)
+ .......+.++..+.+. ++.+.|. ++||.+.+|.. ..+.+||++. +++++++++++.|+++++
T Consensus 351 ~--~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 351 P--EGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA--TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp C--SBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHC-
T ss_pred C--CeeEEEEEeccccCCCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 1 22333436665311223 7888886 56999876532 2468999998 489999999999998764
No 68
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.94 E-value=1.4e-24 Score=215.12 Aligned_cols=315 Identities=7% Similarity=0.017 Sum_probs=222.5
Q ss_pred eeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCc-HHHHHHHHHHHHHHHHHh--CCCCCcEEEEEeCcHHHH
Q 043610 72 FNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRG-KEFKSIIEKAESDLRALL--NIPQEYSVLFLQGGATTQ 146 (430)
Q Consensus 72 ~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~-~~~~~~~~~~r~~la~l~--g~~~~~~vv~~~~gaT~a 146 (430)
++|+.|. .+.++.+++++.+.+.+... . .+++. ....+..+.+.+.+++.+ +++++ +|++ ++|++++
T Consensus 33 idl~~~~~~~~~~~~v~~a~~~~~~~~~~-~-----~~~y~~~~~~~l~~~la~~l~~~~g~~~~~~-~v~~-~~G~~~a 104 (369)
T 3cq5_A 33 IRLNTNENPYPPSEALVADLVATVDKIAT-E-----LNRYPERDAVELRDELAAYITKQTGVAVTRD-NLWA-ANGSNEI 104 (369)
T ss_dssp EECSSCCCCSCCCHHHHHHHHHHHHHHGG-G-----TTSCCCTTCHHHHHHHHHHHHHHHCCCCCGG-GEEE-ESHHHHH
T ss_pred eeccCCCCCCCCCHHHHHHHHHHHHhccc-c-----cccCCCccHHHHHHHHHHhhhhcccCCCChH-hEEE-CCChHHH
Confidence 5555543 45789999999988865210 0 11111 111223333334444444 44454 6666 5899999
Q ss_pred HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCcc
Q 043610 147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIHG 222 (430)
Q Consensus 147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~tG 222 (430)
++.++.+++++||+|++..+++.+.. ..++..| +++.++... ++ .+|+++++ +++ ++++|++++++|+||
T Consensus 105 l~~~~~~l~~~gd~Vl~~~~~y~~~~--~~~~~~g~~~~~v~~~~--~~--~~d~~~l~~~i~~~~~~~v~~~~~~nptG 178 (369)
T 3cq5_A 105 LQQLLQAFGGPGRTALGFQPSYSMHP--ILAKGTHTEFIAVSRGA--DF--RIDMDVALEEIRAKQPDIVFVTTPNNPTG 178 (369)
T ss_dssp HHHHHHHHCSTTCEEEEEESSCTHHH--HHHHHTTCEEEEEECCT--TS--SCCHHHHHHHHHHHCCSEEEEESSCTTTC
T ss_pred HHHHHHHhcCCCCEEEEcCCChHHHH--HHHHHcCCEEEEecCCc--CC--CCCHHHHHHHhhccCCCEEEEeCCCCCCC
Confidence 99999999899999998888776643 3456677 777777532 22 47888886 566 899999999999999
Q ss_pred ccCC--CCccc-cCCCcEEEEeccCcCCCCc---ccc-ccc---cEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCC
Q 043610 223 VEFK--EYPSA-KNSTGILVADMSSNFCSKP---VDV-TRF---GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTP 290 (430)
Q Consensus 223 ~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~---idl-~~~---d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p 290 (430)
.+.| ++.++ +.+++++++|++|+.+... .++ +.+ ++++.|++|++|++| +|++++++++++.+....
T Consensus 179 ~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~- 257 (369)
T 3cq5_A 179 DVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVR- 257 (369)
T ss_dssp CCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTTS-
T ss_pred CCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHcC-
Confidence 9999 67775 4566999999999866532 222 222 388999999999778 799999988877643211
Q ss_pred ccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEE
Q 043610 291 LMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF 370 (430)
Q Consensus 291 ~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f 370 (430)
..+++|...++++..+|+.. ..++.+.++++++++++.+.|++ .|+++.+ + .+ ..+.+
T Consensus 258 -------------~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~~-~~~~~ 315 (369)
T 3cq5_A 258 -------------LPYHLSALSQAAAIVALRHS---ADTLGTVEKLSVERVRVAARLEE-LGYAVVP--S--ES-NFVFF 315 (369)
T ss_dssp -------------CTTCSCHHHHHHHHHHHHTH---HHHHTHHHHHHHHHHHHHHHHHH-HTCEEEC--C--SS-SEEEE
T ss_pred -------------CCCCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHh-CCCEECC--C--CC-eEEEE
Confidence 12357778888888888742 24678899999999999999987 6777653 1 23 34566
Q ss_pred EcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 371 TLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 371 ~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
.++. ...++.+.|.++||.+.+| ...+++|||++ +++|+++++++|+++++.+
T Consensus 316 ~~~~--~~~~l~~~l~~~gi~v~~~-~~~~~iRis~~---~~~~i~~~~~~l~~~~~~~ 368 (369)
T 3cq5_A 316 GDFS--DQHAAWQAFLDRGVLIRDV-GIAGHLRTTIG---VPEENDAFLDAAAEIIKLN 368 (369)
T ss_dssp ECCS--SHHHHHHHHHHTTEECBCC-SCTTEEEEECC---CHHHHHHHHHHHHHHHTTC
T ss_pred ECCC--CHHHHHHHHHHCCEEEEEC-CCCCeEEEEeC---CHHHHHHHHHHHHHHHhcc
Confidence 7651 2337888999999998876 23468999998 7999999999999987653
No 69
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.94 E-value=3.1e-25 Score=221.58 Aligned_cols=320 Identities=14% Similarity=0.110 Sum_probs=220.1
Q ss_pred CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHH
Q 043610 69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGAT 144 (430)
Q Consensus 69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT 144 (430)
+.+++|..|- .+.++.+++++.+.+.+. ...|.. .....+..+.+.+.+.+.+|. +++ +++++ +|++
T Consensus 41 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----~~~y~~---~~g~~~lr~~la~~~~~~~g~~~~~~-~v~~~-~g~t 111 (389)
T 1o4s_A 41 EDVINLTAGEPDFPTPEPVVEEAVRFLQKG----EVKYTD---PRGIYELREGIAKRIGERYKKDISPD-QVVVT-NGAK 111 (389)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHTTC----CCCCCC---TTCCHHHHHHHHHHHHHHHTCCCCGG-GEEEE-SHHH
T ss_pred CCEEEccCCCCCCCCCHHHHHHHHHHHhcC----CCCCCC---CCCCHHHHHHHHHHHHHHhCCCCCHH-HEEEe-cCHH
Confidence 3455555543 346789999998887531 111111 111233333444444444476 344 67765 8999
Q ss_pred HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610 145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH 221 (430)
Q Consensus 145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t 221 (430)
++++.++..++++||+|++..+++.+.. ..++..| +++.++..++ .+..+|+++++ +++++++|++++++|+|
T Consensus 112 ~al~~~~~~l~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~v~~~~p~npt 187 (389)
T 1o4s_A 112 QALFNAFMALLDPGDEVIVFSPVWVSYI--PQIILAGGTVNVVETFMS--KNFQPSLEEVEGLLVGKTKAVLINSPNNPT 187 (389)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECCGG--GTTCCCHHHHHHTCCTTEEEEEEESSCTTT
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCchhHH--HHHHHcCCEEEEEecCCc--cCCCCCHHHHHHhcccCceEEEEcCCCCCC
Confidence 9999999999899999999888877643 3456677 7777776431 12346888887 67889999999999999
Q ss_pred cccCC--C---Cccc-cCCCcEEEEeccCcCCCC---ccc---c---ccccEEEeCCCccccCCc--cEEEEEcHHHHhc
Q 043610 222 GVEFK--E---YPSA-KNSTGILVADMSSNFCSK---PVD---V---TRFGVIYAGAQKNVGPSG--VTIVIVRKDLLGN 284 (430)
Q Consensus 222 G~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~---~id---l---~~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~ 284 (430)
|.++| + |.++ +++|+++++|++|+.+.. +.+ + .+.|+++.|+||++|++| +|++++++++++.
T Consensus 188 G~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~ 267 (389)
T 1o4s_A 188 GVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATA 267 (389)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHHH
Confidence 99988 3 4444 588999999999886543 222 2 233689999999999888 8999999988776
Q ss_pred cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610 285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS 364 (430)
Q Consensus 285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs 364 (430)
+.+.. . ... .+.+...+.++..+|+ . +++.+.++++++++++++.|.+ .|+++.. + ..
T Consensus 268 l~~~~----------~-~~~-~~~~~~~~~a~~~~l~----~-~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~~ 325 (389)
T 1o4s_A 268 VSKIQ----------S-HTT-SCINTVAQYAALKALE----V-DNSYMVQTFKERKNFVVERLKK-MGVKFVE--P--EG 325 (389)
T ss_dssp HHHHH----------H-HHT-CSCCHHHHHHHHHHTT----C-CCHHHHHHHHHHHHHHHHHHHH-TTCCCCC--C--SB
T ss_pred HHHHh----------h-hcc-cCCCHHHHHHHHHHHh----c-cHHHHHHHHHHHHHHHHHHHHh-cCCeeec--C--Cc
Confidence 43200 0 001 2345555665555553 2 4788999999999999999997 4776642 2 23
Q ss_pred cceEEEEcCCCchhHHHHHHHH-HcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610 365 FMNVPFTLEKSDLEAEFVKEAA-KEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 365 ~~iv~f~~~~~~~~~~~~~~L~-~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~ 427 (430)
...+.+.++ ....++.+.|. ++||.+.+|.. ..+++|||++. ++++++++++.|+++++
T Consensus 326 ~~~~~~~~~--~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 326 AFYLFFKVR--GDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT--SIERLTEALDRIEDFLN 387 (389)
T ss_dssp SSEEEEECS--SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS--CHHHHHHHHHHHHHHHT
T ss_pred ceEEEEeCC--CCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeC--CHHHHHHHHHHHHHHHh
Confidence 334555665 11337888886 88999876532 24689999984 89999999999999875
No 70
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.94 E-value=2e-25 Score=221.09 Aligned_cols=316 Identities=14% Similarity=0.102 Sum_probs=218.5
Q ss_pred CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCcHH
Q 043610 69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGGAT 144 (430)
Q Consensus 69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~gaT 144 (430)
+.+++|..|- .+.++.+++++.+.+.+. ...|.. .....+..+.+.+.+.+.+| .+++ +++++ +|++
T Consensus 29 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----~~~y~~---~~~~~~l~~~la~~~~~~~g~~~~~~-~v~~~-~g~~ 99 (370)
T 2z61_A 29 KKVIHLEIGEPDFNTPKPIVDEGIKSLKEG----KTHYTD---SRGILELREKISELYKDKYKADIIPD-NIIIT-GGSS 99 (370)
T ss_dssp CCCEECCCCSCSSCCCHHHHHHHHHHHHTT----CCSCCC---TTCCHHHHHHHHHHHHHHSSCCCCGG-GEEEE-SSHH
T ss_pred CCEEEccCCCCCCCCCHHHHHHHHHHHHcC----ccCCCC---CCCCHHHHHHHHHHHHHHhCCCCChh-hEEEC-CChH
Confidence 3455555543 235789999998887531 111111 11122223333333433334 4444 67765 7899
Q ss_pred HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610 145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH 221 (430)
Q Consensus 145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t 221 (430)
++++.++..++++||+|++..+++.+.. ..++..| +++.++ +|+++++ +++++++|++++++|+|
T Consensus 100 ~a~~~~~~~~~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~v~----------~d~~~l~~~l~~~~~~v~~~~p~npt 167 (370)
T 2z61_A 100 LGLFFALSSIIDDGDEVLIQNPCYPCYK--NFIRFLGAKPVFCD----------FTVESLEEALSDKTKAIIINSPSNPL 167 (370)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSCCTHHH--HHHHHTTCEEEEEC----------SSHHHHHHHCCSSEEEEEEESSCTTT
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCchhHH--HHHHHcCCEEEEeC----------CCHHHHHHhcccCceEEEEcCCCCCc
Confidence 9999999999999999998888777643 3455667 554443 4667776 67789999999999999
Q ss_pred cccCC-CCccc-cCCCcEEEEeccCcCCCC---ccccc------cccEEEeCCCccccCCc--cEEEEEcHHHHhccCCC
Q 043610 222 GVEFK-EYPSA-KNSTGILVADMSSNFCSK---PVDVT------RFGVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDK 288 (430)
Q Consensus 222 G~~~p-ei~~~-~~~g~~lvvD~a~s~G~~---~idl~------~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~ 288 (430)
|.++| +|.++ +++|+++++|++|+.+.. +.++. ..|+++.|+||++|++| +|++++++++++.+...
T Consensus 168 G~~~~~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 247 (370)
T 2z61_A 168 GEVIDREIYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILKL 247 (370)
T ss_dssp CCCCCHHHHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHH
T ss_pred CcccCHHHHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHHHHHHHHHH
Confidence 99999 85554 688999999999986643 23332 23588999999999888 99999999887764320
Q ss_pred CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceE
Q 043610 289 TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV 368 (430)
Q Consensus 289 ~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv 368 (430)
. . ...+++|...++++..+|+.+. ...++.+.++++++++++.+.|.+ .|+++.. + .+...+
T Consensus 248 ~----------~--~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~~~~~~ 309 (370)
T 2z61_A 248 Q----------Q--NLFISAPTISQYAALKAFEKET-EREINSMIKEFDRRRRLVLKYVKD-FGWEVNN--P--IGAYYV 309 (370)
T ss_dssp H----------H--HHTSSSCHHHHHHHGGGGSHHH-HHHHHHHHHHHHHHHHHHHHHHHH-TTCBCCC--C--CBTTEE
T ss_pred H----------h--hcccCCCHHHHHHHHHHHhccC-HHHHHHHHHHHHHHHHHHHHHHHH-cCCeecC--C--CcceEE
Confidence 0 0 0124677888888888887511 225788899999999999999997 4776643 1 123334
Q ss_pred EEEcCCCchhHHHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610 369 PFTLEKSDLEAEFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 369 ~f~~~~~~~~~~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~ 427 (430)
.+.+++ ...++.+.|. ++||.+.+|.. ..+++|||++ +++++++++++.|+++++
T Consensus 310 ~~~~~~--~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~--~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 310 FPNIGE--DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA--NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp CCBCSS--CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC--SCHHHHHHHHHHHHHHHC
T ss_pred EEecCC--CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 456653 2337888886 78999876532 1457999999 599999999999998875
No 71
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.94 E-value=4e-25 Score=220.19 Aligned_cols=321 Identities=9% Similarity=0.015 Sum_probs=222.1
Q ss_pred CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC-CCc-EEEEEeCcHHH
Q 043610 70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP-QEY-SVLFLQGGATT 145 (430)
Q Consensus 70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~-~~~-~vv~~~~gaT~ 145 (430)
.+++|..|- .+.++.+++++.+.+.+ +...|.. .....+..+.+.+.+++.+|.+ +.+ +|+++ +|+++
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~----~~~~y~~---~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~-~g~~~ 102 (386)
T 1u08_A 31 QAINLSQGFPDFDGPRYLQERLAHHVAQ----GANQYAP---MTGVQALREAIAQKTERLYGYQPDADSDITVT-AGATE 102 (386)
T ss_dssp TCEECCCSSCSSCCCHHHHHHHHHHHHT----TCCSCCC---TTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEE-SSHHH
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHHh----hccCCCC---CCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEc-CChHH
Confidence 345555543 24678999999988753 1111111 1112344445555666666854 222 56664 88999
Q ss_pred HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcc
Q 043610 146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHG 222 (430)
Q Consensus 146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG 222 (430)
+++.++..++++||+|++..+++.+.. ..++..| +++.++...+ +..+|+++++ +++++++|++++++|+||
T Consensus 103 a~~~~~~~~~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~v~~~~~---~~~~d~~~l~~~l~~~~~~v~l~~p~nptG 177 (386)
T 1u08_A 103 ALYAAITALVRNGDEVICFDPSYDSYA--PAIALSGGIVKRMALQPP---HFRVDWQEFAALLSERTRLVILNTPHNPSA 177 (386)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECCTT---TCCCCHHHHHHHCCTTEEEEEEESSCTTTC
T ss_pred HHHHHHHHhCCCCCEEEEeCCCchhHH--HHHHHcCCEEEEeecCcc---cCcCCHHHHHHhhcccCEEEEEeCCCCCCC
Confidence 999999999899999999888877643 3556677 7777776431 1247888887 778899999999999999
Q ss_pred ccCC-----CCccc-cCCCcEEEEeccCcCC----CC--cc-ccc---cccEEEeCCCccccCCc--cEEEEEcHHHHhc
Q 043610 223 VEFK-----EYPSA-KNSTGILVADMSSNFC----SK--PV-DVT---RFGVIYAGAQKNVGPSG--VTIVIVRKDLLGN 284 (430)
Q Consensus 223 ~~~p-----ei~~~-~~~g~~lvvD~a~s~G----~~--~i-dl~---~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~ 284 (430)
.++| +|.++ +++|+++++|++|+.. .. ++ .+. +.++++.|++|++|++| +|++++++++++.
T Consensus 178 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 257 (386)
T 1u08_A 178 TVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAE 257 (386)
T ss_dssp CCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHHHHHH
Confidence 9998 34554 6899999999998752 21 22 221 23689999999999889 8999999988776
Q ss_pred cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610 285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS 364 (430)
Q Consensus 285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs 364 (430)
+... .. ...++.+...+.++..+|+.. ...++.++++++++++++++.|++ .|+.+.. + ..
T Consensus 258 l~~~----~~--------~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~~ 318 (386)
T 1u08_A 258 IRKV----HQ--------YLTFSVNTPAQLALADMLRAE--PEHYLALPDFYRQKRDILVNALNE-SRLEILP--C--EG 318 (386)
T ss_dssp HHHH----HH--------HHTSSCCHHHHHHHHHHHHHC--THHHHTHHHHHHHHHHHHHHHTTS-SSCEECC--C--CB
T ss_pred HHHH----HH--------hhccCCChHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHH-CCCeecC--C--Cc
Confidence 4320 00 011355666777788888753 225788899999999999999987 5887653 2 12
Q ss_pred cceEEEEcCCC--chhHHHHHHHH-HcCCeecCCCC------CCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610 365 FMNVPFTLEKS--DLEAEFVKEAA-KEKMVQLKGHR------SVGGMRASIYNAMPLAGVEKLVAFMKD 424 (430)
Q Consensus 365 ~~iv~f~~~~~--~~~~~~~~~L~-~~Gi~~~~g~~------~~g~iRis~~~~~t~edv~~ll~~L~~ 424 (430)
...+.+.+++. ....++.++|. ++||.+.+|.. ..+++|||++. ++++++++++.|++
T Consensus 319 g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 319 TYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK--KESTLLAAAERLRQ 385 (386)
T ss_dssp SSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS--CHHHHHHHHHHHTT
T ss_pred eEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcC--CHHHHHHHHHHHhh
Confidence 33566777642 11337888775 67999876531 23579999974 89999999999865
No 72
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.6e-24 Score=220.87 Aligned_cols=328 Identities=13% Similarity=0.040 Sum_probs=233.6
Q ss_pred CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEeCcHHHHHHHHHhhcCC---
Q 043610 81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP-QEYSVLFLQGGATTQFAAVPLNLCT--- 156 (430)
Q Consensus 81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~-~~~~vv~~~~gaT~a~~~~~~sl~~--- 156 (430)
.++.+.+++.+.+..+...+. + ....++...++.+++++.+++++|.+ +..+++++ +|+|+++..++.++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~-~ggt~a~~~a~~a~~~~~~ 151 (497)
T 3mc6_A 76 GGDDLIHLQTIAYEKYCVANQ--L-HPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTT-SGGTESLLLACLSAKMYAL 151 (497)
T ss_dssp CCHHHHHHHHHHHHHTSSCBT--T-CTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEE-SSHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhhcCC--C-CcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEc-CcHHHHHHHHHHHHHHHHH
Confidence 346788887777654322111 0 11224667788889999999999998 22266665 7899999999888743
Q ss_pred --CC---CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--
Q 043610 157 --PN---DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK-- 226 (430)
Q Consensus 157 --~g---d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p-- 226 (430)
+| |+|++..+.+.+. ...++..| +++.++..+ .+..+|+++|+ +++++++|++++++|++|.+.|
T Consensus 152 ~~~g~~~~~Vi~~~~~h~~~--~~~~~~~G~~~~~v~~~~---~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~ 226 (497)
T 3mc6_A 152 HHRGITEPEIIAPVTAHAGF--DKAAYYFGMKLRHVELDP---TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIE 226 (497)
T ss_dssp HHSCCSSCEEEEETTSCHHH--HHHHHHSCCEEEEECBCT---TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCT
T ss_pred hcCCCCCceEEEeCCccHHH--HHHHHHcCCeEEEEecCc---ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHH
Confidence 45 7887766666553 34556678 888887643 12357888887 7889999999999999999999
Q ss_pred CCccc-cCCCcEEEEeccCcC-----------CCC-ccccc--cccEEEeCCCccc-cCCccEEEEEcHHHHhccCC-CC
Q 043610 227 EYPSA-KNSTGILVADMSSNF-----------CSK-PVDVT--RFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQD-KT 289 (430)
Q Consensus 227 ei~~~-~~~g~~lvvD~a~s~-----------G~~-~idl~--~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~-~~ 289 (430)
+|.++ +++|+++++|++|+. |.. +++.. ..|+++.++|||+ ||.|+|+++++++.+..... ..
T Consensus 227 ~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~ 306 (497)
T 3mc6_A 227 GLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVN 306 (497)
T ss_dssp TTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCB
T ss_pred HHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhccc
Confidence 78886 689999999999872 222 34443 3479999999998 69999999998776554321 11
Q ss_pred CccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-cCCceecCCCCCCCccceE
Q 043610 290 PLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-SNGFYKCPVEKSVRSFMNV 368 (430)
Q Consensus 290 p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~~~~~~~~rs~~iv 368 (430)
+.+... ........+|.+...+.++..+++.+.. .|++++.++..+++++++++|.+ ..|++++. .+ .. .++
T Consensus 307 ~~~~~~--~~~~~~~~g~~~~~~~~a~~aal~~l~~-~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~-~~--~~-~~v 379 (497)
T 3mc6_A 307 PAWTGG--LYGSPTLAGSRPGAIVVGCWATMVNMGE-NGYIESCQEIVGAAMKFKKYIQENIPDLDIMG-NP--RY-SVI 379 (497)
T ss_dssp TTCTTS--CBCCSSSCSSCBHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHSCTTCEECS-CC--CS-SEE
T ss_pred ccccCC--CcCCcCcccCCcchhHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec-CC--Ce-eEE
Confidence 111110 0011223356777777888888887764 47899999999999999999998 46888763 21 22 467
Q ss_pred EEEcCCCchhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 369 PFTLEKSDLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 369 ~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
+|..++ .+. ++.+.|.++||.+..+. ....+|+++. .++++|+++++++|+++++.
T Consensus 380 ~~~~~~--~~~~~l~~~L~~~Gi~v~~~~-~~~~~ri~~~-~~t~e~i~~~~~~L~~~l~~ 436 (497)
T 3mc6_A 380 SFSSKT--LNIHELSDRLSKKGWHFNALQ-KPVALHMAFT-RLSAHVVDEICDILRTTVQE 436 (497)
T ss_dssp EEECTT--TTHHHHHHHHHTTTCBCEECC-SSCCEEEECC-TTTTCTHHHHHHHHHHHHHH
T ss_pred EEeCCC--CCHHHHHHHHHhCCEEEecCC-CCCeEEEEEe-CCCHHHHHHHHHHHHHHHHH
Confidence 777653 333 79999999999875432 2346899998 78999999999999998764
No 73
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.94 E-value=6.5e-25 Score=218.92 Aligned_cols=325 Identities=10% Similarity=0.034 Sum_probs=221.6
Q ss_pred CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHH-HHHHHHHHHHHHhC--CCCCcEEEEEeCcHH
Q 043610 70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKS-IIEKAESDLRALLN--IPQEYSVLFLQGGAT 144 (430)
Q Consensus 70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~r~~la~l~g--~~~~~~vv~~~~gaT 144 (430)
+++.|+.|. .+.++.|++++.+.+.+ +. .++.....+ ..+++.+.+.+.+| .+++ +|+++ +|++
T Consensus 29 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~----~~-----~~y~~~~~~~lr~~la~~l~~~~g~~~~~~-~v~~t-~g~~ 97 (390)
T 1d2f_A 29 DLLPFTISDMDFATAPCIIEALNQRLMH----GV-----FGYSRWKNDEFLAAIAHWFSTQHYTAIDSQ-TVVYG-PSVI 97 (390)
T ss_dssp -CEECCSSSCSSCCCHHHHHHHHHHHTT----CC-----CCCCCSCCHHHHHHHHHHHHHHSCCCCCGG-GEEEE-SCHH
T ss_pred CeeEeeecCCCCCCCHHHHHHHHHHHhC----CC-----CCCCCCChHHHHHHHHHHHHHhcCCCCCHH-HEEEc-CCHH
Confidence 455555544 35788999999988743 11 111111222 33344444444457 4554 67664 8899
Q ss_pred HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCC
Q 043610 145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETI 220 (430)
Q Consensus 145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~ 220 (430)
++++.++.++.++||+|++..+++.+. ...++..| +++.++...+. ....+|+++++ +++ ++++|++++++|+
T Consensus 98 ~al~~~~~~l~~~gd~vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~l~~~~~~~v~l~~p~np 174 (390)
T 1d2f_A 98 YMVSELIRQWSETGEGVVIHTPAYDAF--YKAIEGNQRTVMPVALEKQA-DGWFCDMGKLEAVLAKPECKIMLLCSPQNP 174 (390)
T ss_dssp HHHHHHHHHSSCTTCEEEEEESCCHHH--HHHHHHTTCEEEEEECEECS-SSEECCHHHHHHHHTSTTEEEEEEESSCTT
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCcHHH--HHHHHHCCCEEEEeecccCC-CccccCHHHHHHHhccCCCeEEEEeCCCCC
Confidence 999999999989999999888877764 34456677 77777764210 01136788887 554 8999999999999
Q ss_pred ccccCC--C---Cccc-cCCCcEEEEeccCcCCC----Cccccc----cc-cEEEeCCCccccCCc--cEEEEEc-HHHH
Q 043610 221 HGVEFK--E---YPSA-KNSTGILVADMSSNFCS----KPVDVT----RF-GVIYAGAQKNVGPSG--VTIVIVR-KDLL 282 (430)
Q Consensus 221 tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~~idl~----~~-d~~~~s~~K~~gp~G--~g~l~v~-~~~~ 282 (430)
||.++| + |.++ +++|+++++|++|+.+. ...++. ++ |. +.|++|++|++| +|+++++ ++++
T Consensus 175 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~ 253 (390)
T 1d2f_A 175 TGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSR 253 (390)
T ss_dssp TCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHH
T ss_pred CCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHH
Confidence 999998 3 4443 58999999999998632 223332 22 66 999999999878 6999985 6776
Q ss_pred hccCCCCCccccccchhhc-CCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-cCCceecCCCC
Q 043610 283 GNAQDKTPLMLDYKIHDEN-NSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-SNGFYKCPVEK 360 (430)
Q Consensus 283 ~~~~~~~p~~~~~~~~~~~-~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~~~~~~ 360 (430)
+.+.. . .. ...++++|...++++..+|+... ..++.++++++++++++.+.|++ .+|+.+.+ +
T Consensus 254 ~~~~~-------~----~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~ 318 (390)
T 1d2f_A 254 DAYLS-------A----LKGRDGLSSPSVLALTAHIAAYQQGA--PWLDALRIYLKDNLTYIADKMNAAFPELNWQI--P 318 (390)
T ss_dssp HHHHH-------H----HHTTSCCCSCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCC--C
T ss_pred HHHHH-------H----HhhhcccCCCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEec--C
Confidence 65321 0 01 12234788888888888887532 24678899999999999999987 45765542 1
Q ss_pred CCCccceEEEEcCCCchhH-HHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 361 SVRSFMNVPFTLEKSDLEA-EFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 361 ~~rs~~iv~f~~~~~~~~~-~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
.++..+.+.+++.+.+. ++.+.|. ++||.+.+|.. ..+++|||++. ++++++++++.|++++++
T Consensus 319 --~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~~ 388 (390)
T 1d2f_A 319 --QSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC--PRSKLEKGVAGLINAIRA 388 (390)
T ss_dssp --SBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHH
T ss_pred --CccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 23344456776321233 7888888 67999877542 24589999986 689999999999998865
No 74
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.94 E-value=3e-25 Score=222.85 Aligned_cols=327 Identities=11% Similarity=0.093 Sum_probs=222.3
Q ss_pred CCCceeecCCCC-----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEe
Q 043610 68 EDRVFNFAAGPA-----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQ 140 (430)
Q Consensus 68 ~~~~~l~~~gp~-----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~ 140 (430)
.+..+.|..|-. +.++.+++++.+.+.+. ...|.. .....+..+.+.+.+.+.+| .+++ +|+++
T Consensus 37 g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~y~~---~~g~~~l~~~la~~l~~~~g~~~~~~-~v~~t- 107 (406)
T 1xi9_A 37 GIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEG----HNYYGD---SEGLPELRKAIVEREKRKNGVDITPD-DVRVT- 107 (406)
T ss_dssp TCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTT----CCSCCC---TTCCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-
T ss_pred CCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcC----CCCCCC---CCCcHHHHHHHHHHHHHhcCCCCCHH-HEEEc-
Confidence 344555555433 56789999998887531 111111 11122333344444444444 4444 67764
Q ss_pred CcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeec
Q 043610 141 GGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICAN 217 (430)
Q Consensus 141 ~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~ 217 (430)
+|+++++..++..++++||+|++..+++.+. ...++..| +++.++..++ .+..+|+++++ +++++++|+++++
T Consensus 108 ~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~--~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~v~i~~p 183 (406)
T 1xi9_A 108 AAVTEALQLIFGALLDPGDEILVPGPSYPPY--TGLVKFYGGKPVEYRTIEE--EDWQPDIDDIRKKITDRTKAIAVINP 183 (406)
T ss_dssp SHHHHHHHHHHHHHCCTTCEEEEEESCCHHH--HHHHHHTTCEEEEEEEEGG--GTSEECHHHHHHHCCTTEEEEEEESS
T ss_pred CChHHHHHHHHHHhCCCCCEEEEcCCCCccH--HHHHHHcCCEEEEeecCCC--cCCcCCHHHHHHhhCcCceEEEEECC
Confidence 8899999999999989999999888877664 34456677 7777776421 22246888887 7788999999999
Q ss_pred CCCccccCC-----CCccc-cCCCcEEEEeccCcCCCC---ccccc----cc-cEEEeCCCccccCCc--cEEEE--EcH
Q 043610 218 ETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCSK---PVDVT----RF-GVIYAGAQKNVGPSG--VTIVI--VRK 279 (430)
Q Consensus 218 ~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~---~idl~----~~-d~~~~s~~K~~gp~G--~g~l~--v~~ 279 (430)
+|+||.++| +|.++ +++|+++++|++|+.+.. +..+. +. ++++.|++|++|++| +|+++ .++
T Consensus 184 ~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 263 (406)
T 1xi9_A 184 NNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPE 263 (406)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTT
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEeccccccCCCccEEEEEEEecCc
Confidence 999999987 34444 588999999999876432 22332 23 578899999999888 89999 788
Q ss_pred ----HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCcee
Q 043610 280 ----DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYK 355 (430)
Q Consensus 280 ----~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~ 355 (430)
++++.+.. . ... . +++|...++++..+|+... .+++.+.++++++++++++.|.+..|+.+
T Consensus 264 ~~~~~l~~~l~~-------~---~~~--~-~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 328 (406)
T 1xi9_A 264 NKLSEVREAIDR-------L---ARI--R-LCPNTPAQFAAIAGLTGPM--DYLKEYMKKLKERRDYIYKRLNEIPGIST 328 (406)
T ss_dssp CTTHHHHHHHHH-------H---HHH--T-CCSCSHHHHHHHHHHHSCC--HHHHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred hhHHHHHHHHHH-------H---HHh--h-cCCCHHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHHHHHHHHhCCCCee
Confidence 77665421 0 011 1 3566777888888886322 13678889999999999999997447776
Q ss_pred cCCCCCCCccceEEEEcCC--CchhHHHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 356 CPVEKSVRSFMNVPFTLEK--SDLEAEFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 356 ~~~~~~~rs~~iv~f~~~~--~~~~~~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
.. + .+...+.+.+++ .....++.+.|. ++||.+.+|.. ..+++|||++ +++++++++++.|++++++
T Consensus 329 ~~--~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~--~~~~~i~~~~~~l~~~l~~ 402 (406)
T 1xi9_A 329 TK--P--QGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL--PPIEILEEAMDRFEKFMKE 402 (406)
T ss_dssp CC--C--CBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred ec--C--CeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 43 2 122333335552 112337888886 88999876532 1457999997 7999999999999998865
No 75
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.93 E-value=8.8e-25 Score=216.10 Aligned_cols=312 Identities=13% Similarity=0.066 Sum_probs=221.6
Q ss_pred CCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610 68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATT 145 (430)
Q Consensus 68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~ 145 (430)
.+.+++|+.|. .+.++.+++++.+.+.+. +++... ...++|+.+++++|++++ +|+++ +|+++
T Consensus 23 ~~~~idl~~~~~~~~~~~~v~~a~~~~~~~~----------~~y~~~---~~~~l~~~la~~~~~~~~-~v~~~-~g~~~ 87 (364)
T 1lc5_A 23 PDQLLDFSANINPLGMPVSVKRALIDNLDCI----------ERYPDA---DYFHLHQALARHHQVPAS-WILAG-NGETE 87 (364)
T ss_dssp GGGSEECSSCCCTTCCCHHHHHHHHHTGGGG----------GSCCCT---TCHHHHHHHHHHHTSCGG-GEEEE-SSHHH
T ss_pred ccceEEeccccCCCCCCHHHHHHHHHHHHHh----------hcCCCC---CHHHHHHHHHHHHCcCHH-HEEEC-CCHHH
Confidence 34566776664 347889999998877531 111111 245888999999998765 67765 88999
Q ss_pred HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCcccc-c-cCCCccEEEEeecCCCcc
Q 043610 146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDAL-E-QNPDAKYLHICANETIHG 222 (430)
Q Consensus 146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l-~-i~~~~~lv~i~~~~t~tG 222 (430)
+++.++..+ +||+|++..+++.+. ...++..| +++.++.... .+..+ ++++ + +++++++|++++++|+||
T Consensus 88 al~~~~~~~--~gd~vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~--~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG 160 (364)
T 1lc5_A 88 SIFTVASGL--KPRRAMIVTPGFAEY--GRALAQSGCEIRRWSLREA--DGWQL-TDAILEALTPDLDCLFLCTPNNPTG 160 (364)
T ss_dssp HHHHHHHHH--CCSEEEEEESCCTHH--HHHHHHTTCEEEEEECCGG--GTTCC-CTTHHHHCCTTCCEEEEESSCTTTC
T ss_pred HHHHHHHHc--CCCeEEEeCCCcHHH--HHHHHHcCCeEEEEeCCcc--cccch-hHHHHHhccCCCCEEEEeCCCCCCC
Confidence 999998888 679999888877664 34556677 7777776431 12112 3543 3 667899999999999999
Q ss_pred ccCC--C---Cccc-cCCCcEEEEeccCcCCCC----cccc-ccc--cEEEeCCCccccCCc--cEEEE-EcHHHHhccC
Q 043610 223 VEFK--E---YPSA-KNSTGILVADMSSNFCSK----PVDV-TRF--GVIYAGAQKNVGPSG--VTIVI-VRKDLLGNAQ 286 (430)
Q Consensus 223 ~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~----~idl-~~~--d~~~~s~~K~~gp~G--~g~l~-v~~~~~~~~~ 286 (430)
.++| + |.++ +++|+++++|++|+.+.. .+++ +.. ++++.|++|++|++| +|+++ .++++++.+.
T Consensus 161 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~ 240 (364)
T 1lc5_A 161 LLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMR 240 (364)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHH
Confidence 9998 3 4443 578999999999875432 1332 223 588999999999778 69999 8998877643
Q ss_pred CCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccc
Q 043610 287 DKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFM 366 (430)
Q Consensus 287 ~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~ 366 (430)
+.. ..+++|...++++..+|+. . ..++.++++++++++++.+.|.+..|+.+.+ + .+.
T Consensus 241 ~~~--------------~~~~~~~~~~~~~~~~l~~-~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~--~g~- 298 (364)
T 1lc5_A 241 RQQ--------------MPWSVNALAALAGEVALQD-S--AWQQATWHWLREEGARFYQALCQLPLLTVYP--G--RAN- 298 (364)
T ss_dssp HHS--------------CTTCSCHHHHHHHHHGGGC-H--HHHHHHHHHHHHHHHHHHHHHHTSTTEEECC--C--SSS-
T ss_pred HhC--------------CCCCCCHHHHHHHHHHHhC-c--HHHHHHHHHHHHHHHHHHHHHhcCCCCEECC--C--CCe-
Confidence 200 1246788888888888864 2 2578889999999999999998755887653 1 232
Q ss_pred eEEEEcCCCchhHHHHHHHHHcCCeecCCCCC----CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 367 NVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRS----VGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 367 iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~----~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
.+.+.+++ . ..++.+.|.++||.+.+|... .+++|||+. +++|+++++++|++++++
T Consensus 299 ~~~~~~~~-~-~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~~ 359 (364)
T 1lc5_A 299 YLLLRCER-E-DIDLQRRLLTQRILIRSCANYPGLDSRYYRVAIR---SAAQNERLLAALRNVLTG 359 (364)
T ss_dssp EEEEEESC-T-TCCHHHHHHTTTEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHC--
T ss_pred EEEEECCC-c-HHHHHHHHHHCCcEEeeCcccCCCCCCEEEEEeC---CHHHHHHHHHHHHHHhhc
Confidence 35567764 1 226888998899998776421 458999976 699999999999998664
No 76
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.93 E-value=7.2e-25 Score=217.56 Aligned_cols=320 Identities=13% Similarity=0.054 Sum_probs=220.8
Q ss_pred CCCceeecCCCC--CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh----CCC--CCcEEEEE
Q 043610 68 EDRVFNFAAGPA--NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL----NIP--QEYSVLFL 139 (430)
Q Consensus 68 ~~~~~l~~~gp~--~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~----g~~--~~~~vv~~ 139 (430)
.+.+++|+.|-. +.++.+++++.+.+.+. ..+.++.. ....++|+.+++++ |.+ ++.+|+++
T Consensus 24 g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~--------~~~~y~~~--~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~ 93 (376)
T 2dou_A 24 GVGLIDLSIGSTDLPPPEAPLKALAEALNDP--------TTYGYCLK--SCTLPFLEEAARWYEGRYGVGLDPRREALAL 93 (376)
T ss_dssp TCCCEECSSCCCCCCCCHHHHHHHHHHTTCG--------GGSSCCCH--HHHHHHHHHHHHHHHHHHSCCCCTTTSEEEE
T ss_pred CCCEEeccCCCCCCCCCHHHHHHHHHHHhCC--------CcCCCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCccEEEc
Confidence 345666666542 35789999998877431 01222221 12345555555555 875 22267765
Q ss_pred eCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEee
Q 043610 140 QGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICA 216 (430)
Q Consensus 140 ~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~ 216 (430)
+|++++++.++..+.++||+|++..+++.+. ...++..| +++.++. + .+..+|+++++ +++++++|++++
T Consensus 94 -~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~--~~~~~~~g~~~~~~~~-~---~~~~~d~~~l~~~l~~~~~~v~l~~ 166 (376)
T 2dou_A 94 -IGSQEGLAHLLLALTEPEDLLLLPEVAYPSY--FGAARVASLRTFLIPL-R---EDGLADLKAVPEGVWREAKVLLLNY 166 (376)
T ss_dssp -SSHHHHHHHHHHHHCCTTCEEEEESSCCHHH--HHHHHHTTCEEEEECB-C---TTSSBCGGGSCHHHHHHEEEEEECS
T ss_pred -CCcHHHHHHHHHHhcCCCCEEEECCCCcHhH--HHHHHHcCCEEEEeeC-C---CCCCCCHHHHHHhhccCceEEEECC
Confidence 7899999999999988999999887776664 24456677 7777766 2 23347888887 667899999999
Q ss_pred cCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCC---Cc---ccc-c--cccEEEeCCCccccCCc--cEEEEEcH
Q 043610 217 NETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS---KP---VDV-T--RFGVIYAGAQKNVGPSG--VTIVIVRK 279 (430)
Q Consensus 217 ~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~---~~---idl-~--~~d~~~~s~~K~~gp~G--~g~l~v~~ 279 (430)
++|+||.++| + |.++ +++|+++++|++|+.+. .+ +++ + +.++++.|++|++|++| +|+++.++
T Consensus 167 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 246 (376)
T 2dou_A 167 PNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE 246 (376)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECH
T ss_pred CCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCH
Confidence 9999999998 3 4443 58999999999987542 22 222 1 22478899999999778 79999999
Q ss_pred HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCC
Q 043610 280 DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVE 359 (430)
Q Consensus 280 ~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~ 359 (430)
++++.+.... . ...++.|...++++..+|+... ..++.+.++++++++++.+.|.+ . +.+..
T Consensus 247 ~~~~~l~~~~----------~--~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~-- 308 (376)
T 2dou_A 247 EALARLERVK----------G--VIDFNQYAGVLRMGVEALKTPK--EVVRGYARVYRERALGMAEALKG-V-LSLLP-- 308 (376)
T ss_dssp HHHHHHHHHH----------H--HHCCCSCHHHHHHHHHHHTSCH--HHHHHHHHHHHHHHHHHHHHHTT-T-SEECC--
T ss_pred HHHHHHHHHH----------H--hcccCCCHHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHHH-h-cCccC--
Confidence 8877643200 0 0113557777888877886422 24678889999999999999986 4 55542
Q ss_pred CCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610 360 KSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 360 ~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~ 426 (430)
+ .+...+.+.+++.....++.+.|.++||.+.+|.. ..+++|||++. ++++++++++.|++++
T Consensus 309 ~--~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~~--~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 309 P--RATMYLWGRLPEGVDDLEFGLRLVERGVALAPGRGFGPGGKGFVRIALVR--PLEELLEAAKRIREAL 375 (376)
T ss_dssp C--CBSSEEEEECCTTCCHHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHTC
T ss_pred C--CeeEEEEEECCCCCCHHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 1 13334557776421123789999888999876532 14589999985 8999999999998764
No 77
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.93 E-value=7e-25 Score=220.55 Aligned_cols=325 Identities=10% Similarity=0.031 Sum_probs=221.6
Q ss_pred CCCceeecCCCC--CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh----CC--CCCcEEEEE
Q 043610 68 EDRVFNFAAGPA--NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL----NI--PQEYSVLFL 139 (430)
Q Consensus 68 ~~~~~l~~~gp~--~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~----g~--~~~~~vv~~ 139 (430)
.+.+++|+.|-. +.++.+++++.+.+.+.. ...|.. .... .++|+.+++++ |. +++.+|+++
T Consensus 36 g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~---~~~y~~---~~g~----~~l~~~ia~~~~~~~g~~~~~~~~v~~t 105 (412)
T 2x5d_A 36 GEDIIDLSMGNPDGPTPPHIVEKLCTVAQRED---THGYST---SRGI----PRLRRAISHWYRDRYDVQIDPESEAIVT 105 (412)
T ss_dssp TCCCEECSSCCCCSCCCHHHHHHHHHTC------------C---TTCC----HHHHHHHHHHHHHHHCCCCCTTTSEEEE
T ss_pred CCCEEecCCCCCCCCCCHHHHHHHHHHHhCCC---CCCCCC---CCCc----HHHHHHHHHHHHHHhCCCCCCCcCEEEc
Confidence 345667766542 467899999988765310 000100 1112 24455555555 86 331267765
Q ss_pred eCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEee
Q 043610 140 QGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICA 216 (430)
Q Consensus 140 ~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~ 216 (430)
+|++++++.++..++++||+|++..+++.+.. ..++..| +++.++...+ .+..+|+++++ +++++++|++++
T Consensus 106 -~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~v~l~~ 180 (412)
T 2x5d_A 106 -IGSKEGLAHLMLATLDHGDTILVPNPSYPIHI--YGAVIAGAQVRSVPLVPG--IDFFNELERAIRESIPKPRMMILGF 180 (412)
T ss_dssp -SCHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--HHHHHHTCEEEEEECSTT--SCHHHHHHHHHHTEESCCSEEEEES
T ss_pred -CChHHHHHHHHHHhCCCCCEEEEcCCCchhHH--HHHHHcCCEEEEeecCCc--cCCCCCHHHHHHhcccCceEEEECC
Confidence 78999999999999999999998888877643 3455677 7777776431 12225677776 678899999999
Q ss_pred cCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCC----ccc---cc---cccEEEeCCCccccCCc--cEEEEEc
Q 043610 217 NETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSK----PVD---VT---RFGVIYAGAQKNVGPSG--VTIVIVR 278 (430)
Q Consensus 217 ~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~----~id---l~---~~d~~~~s~~K~~gp~G--~g~l~v~ 278 (430)
++|+||.++| + |.++ +++|+++++|++|+.+.. +.+ +. +.++++.|++|++|++| +|+++++
T Consensus 181 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 260 (412)
T 2x5d_A 181 PSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGN 260 (412)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEEC
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcC
Confidence 9999999998 3 4444 588999999999986542 222 22 23588999999999778 7999999
Q ss_pred HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC
Q 043610 279 KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV 358 (430)
Q Consensus 279 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~ 358 (430)
+++++.+... .. ...++.+...++++..+|+... ..++.+.++++++++++.+.|.+. |+.+..
T Consensus 261 ~~~~~~l~~~----~~--------~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~- 324 (412)
T 2x5d_A 261 PELVSALARI----KS--------YHDYGTFTPLQVAAIAALEGDQ--QCVRDIARQYQQRRDVLVKGLREA-GWMVEN- 324 (412)
T ss_dssp HHHHHHHHHH----HH--------HHCCCCCHHHHHHHHHHHHSCS--HHHHHHHHHHHHHHHHHHHHHHHH-TCCCCC-
T ss_pred HHHHHHHHHH----Hh--------hhccCCCHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHC-CCEecC-
Confidence 9887764320 00 0124667788888877776422 246888999999999999999974 776542
Q ss_pred CCCCCccceEEEEcCCCch----hHHHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 359 EKSVRSFMNVPFTLEKSDL----EAEFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 359 ~~~~rs~~iv~f~~~~~~~----~~~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
+ .+...+.+.++. +. ..++.+.|. ++||.+.+|.. ..+++|||++. ++++++++++.|++++++.
T Consensus 325 -~--~~g~~~~~~~~~-~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~ 398 (412)
T 2x5d_A 325 -P--KASMYVWAKIPE-PYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE--NRDRLRQAVRGIKAMFRAD 398 (412)
T ss_dssp -C--SBSSEEEEECCT-TTGGGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHHT
T ss_pred -C--CeeeEEEEEcCC-ccCCCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhc
Confidence 1 233345567763 22 337888885 46999876532 14589999986 8999999999999988753
No 78
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.93 E-value=9e-25 Score=218.44 Aligned_cols=325 Identities=10% Similarity=0.045 Sum_probs=221.2
Q ss_pred CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCcHHH
Q 043610 70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGGATT 145 (430)
Q Consensus 70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~gaT~ 145 (430)
.+++|+.|- .++++.|++++.+.+.+. . .++.....+..+.+.+.+++.+| .+++ +|+++ +|+++
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----~-----~~y~~~~~~l~~~la~~l~~~~g~~~~~~-~v~~t-~g~~~ 100 (399)
T 1c7n_A 32 EVVPLSVADMEFKNPPELIEGLKKYLDET----V-----LGYTGPTEEYKKTVKKWMKDRHQWDIQTD-WIINT-AGVVP 100 (399)
T ss_dssp TCCCCCSSSCSSCCCHHHHHHHHHHHHHC----C-----CSSBCCCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SSHHH
T ss_pred CceeeeecCCCCCCCHHHHHHHHHHHhcC----C-----CCCCCCcHHHHHHHHHHHHHHhCCCCChh-hEEEc-CCHHH
Confidence 455555544 356889999999887531 1 11111123334444555555568 4454 67764 88999
Q ss_pred HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCC-CCCCccccc--cC-CCccEEEEeecCCC
Q 043610 146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYT-KIPNFDALE--QN-PDAKYLHICANETI 220 (430)
Q Consensus 146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g-~~~d~~~l~--i~-~~~~lv~i~~~~t~ 220 (430)
+++.++.++.++||+|++..+.+.+.. ..++..| +++.++...+ .| ..+|+++++ ++ +++++|++++++|+
T Consensus 101 a~~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~--~g~~~~d~~~l~~~l~~~~~~~v~~~~~~np 176 (399)
T 1c7n_A 101 AVFNAVREFTKPGDGVIIITPVYYPFF--MAIKNQERKIIECELLEK--DGYYTIDFQKLEKLSKDKNNKALLFCSPHNP 176 (399)
T ss_dssp HHHHHHHHHCCTTCEEEECSSCCTHHH--HHHHTTTCEEEECCCEEE--TTEEECCHHHHHHHHTCTTEEEEEEESSBTT
T ss_pred HHHHHHHHhcCCCCEEEEcCCCcHhHH--HHHHHcCCEEEecccccC--CCCEEEcHHHHHHHhccCCCcEEEEcCCCCC
Confidence 999999999899999998777766642 3455667 6666655311 11 136788887 55 78999999999999
Q ss_pred ccccCC--C---Cccc-cCCCcEEEEeccCcCCC----Ccccccc-----c--cEEEeCCCccccCCc--cEEEEEc-HH
Q 043610 221 HGVEFK--E---YPSA-KNSTGILVADMSSNFCS----KPVDVTR-----F--GVIYAGAQKNVGPSG--VTIVIVR-KD 280 (430)
Q Consensus 221 tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~~idl~~-----~--d~~~~s~~K~~gp~G--~g~l~v~-~~ 280 (430)
||.++| + |.++ +++|+++++|++|+.+. .+.++.. . ++++.|++|++|++| +|+++++ ++
T Consensus 177 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 256 (399)
T 1c7n_A 177 VGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPD 256 (399)
T ss_dssp TTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHH
T ss_pred CCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHH
Confidence 999998 3 4444 58999999999988532 2233322 2 378899999999778 7999997 56
Q ss_pred HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-cCCceecCCC
Q 043610 281 LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-SNGFYKCPVE 359 (430)
Q Consensus 281 ~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~~~~~ 359 (430)
+++.+.... . ....+++|...++++..+|+... ..++.+.++++++++++.+.|++ .+|+.+..
T Consensus 257 ~~~~l~~~~----------~-~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-- 321 (399)
T 1c7n_A 257 IRERFTKSR----------D-ATSGMPFTTLGYKACEICYKECG--KWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPL-- 321 (399)
T ss_dssp HHHHHHHHH----------H-HTTCCCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCC--
T ss_pred HHHHHHHHH----------h-hcccCCCCHHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHHhhCCCCeEec--
Confidence 766542100 0 01124678888888888887432 25788899999999999999987 45776542
Q ss_pred CCCCccceEEEEcCCCchhH-HHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 360 KSVRSFMNVPFTLEKSDLEA-EFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 360 ~~~rs~~iv~f~~~~~~~~~-~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
+ .+...+.+.+++.+.+. ++.+.|. ++||.+.+|.. ..+++|||++. ++++++++++.|++++++
T Consensus 322 ~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~ 392 (399)
T 1c7n_A 322 I--EGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA--PSSVIQESLERLNKALKD 392 (399)
T ss_dssp C--SBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHH
T ss_pred C--CceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc--CHHHHHHHHHHHHHHHHH
Confidence 1 23344456776311233 7888886 68999877542 24589999986 488999999999887764
No 79
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.93 E-value=2.6e-26 Score=234.65 Aligned_cols=332 Identities=9% Similarity=-0.020 Sum_probs=222.8
Q ss_pred ccCCCCCceeecCCCCCCcHHHHHHHHHHhh-hccCCCCccc-ccC------CCcHHHHHHHHHHHHHHHHHhCCCCCcE
Q 043610 64 QSGQEDRVFNFAAGPANLPEKVLLKAQSELY-NWRGSGMSVM-EMS------HRGKEFKSIIEKAESDLRALLNIPQEYS 135 (430)
Q Consensus 64 ~~~~~~~~~l~~~gp~~~~~~V~~a~~~~~~-~~~~~g~s~~-~~~------~~~~~~~~~~~~~r~~la~l~g~~~~~~ 135 (430)
+......+|+++++.++.|+.|+++|..... .+. .+.+.. ... ..++.+.++.+++++.+++++|+++ +
T Consensus 75 ~~~~~~~~yld~aa~~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~--~ 151 (456)
T 2z67_A 75 LSMMDTDKDPKSVRIGEREARTYSKIHEELSSGFC-HGIGRSGNLVDPQPKASGASIMYALTNKILESFFKQLGLNV--H 151 (456)
T ss_dssp HHTTBGGGCTTCEECSSCCCCCSCHHHHHHTTTCT-TCBSBTTBTTSCCTTBHHHHHHHHHHHHHHHHHHHHTTCCC--E
T ss_pred HHhccccccccccccccccccccccccCccccccC-CCccHHHHHHhhCcccccCcHHHHHHHHHHHHHHHHcCCCC--C
Confidence 4444556899999999999999999887432 221 111110 000 1123467888999999999999986 4
Q ss_pred EEEEeCcHH-HHHHHHHhhcCC--CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c-C--
Q 043610 136 VLFLQGGAT-TQFAAVPLNLCT--PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q-N-- 206 (430)
Q Consensus 136 vv~~~~gaT-~a~~~~~~sl~~--~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i-~-- 206 (430)
+++ ++|+| .++..++..+.. +|++|++....+.+. .+.++..| +++.++....++.+ .+|+++|+ + +
T Consensus 152 ~~~-t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~--~~~~~~~G~~~~~v~~~~~~~~~-~~d~~~l~~~i~~~~ 227 (456)
T 2z67_A 152 AIA-TPISTGMSISLCLSAARKKYGSNVVIYPYASHKSP--IKAVSFVGMNMRLVETVLDGDRV-YVPVEDIENAIKKEI 227 (456)
T ss_dssp EEE-ESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH--HHHHHHTTCEEEEECCEEETTEE-ECCHHHHHHHHHHHH
T ss_pred EEE-eCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHH--HHHHHHcCCCceEEEEeccCCCC-CcCHHHHHHHHHHHh
Confidence 555 47788 455544554322 566677676655552 24555678 77777652100122 57888886 6 4
Q ss_pred --CCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCc---CCCCccccc----cccEEEeCCCccc-cCCccE
Q 043610 207 --PDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSN---FCSKPVDVT----RFGVIYAGAQKNV-GPSGVT 273 (430)
Q Consensus 207 --~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s---~G~~~idl~----~~d~~~~s~~K~~-gp~G~g 273 (430)
+++.+|++++++|+||.+.| +|.++ +++|+++++|++++ +|..+.++. ..|++++|+|||+ +|.|+|
T Consensus 228 ~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~D~~~~s~hK~~~~p~g~G 307 (456)
T 2z67_A 228 ELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVVSSSDKNLLTPIGGG 307 (456)
T ss_dssp HTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCSEEEEEHHHHHCCCSSCE
T ss_pred hCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCCCEEEEcCCCCcCCCCCeE
Confidence 46778888889999999999 78886 68899999997654 444455442 3589999999997 699999
Q ss_pred EEEE-cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC-
Q 043610 274 IVIV-RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN- 351 (430)
Q Consensus 274 ~l~v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~- 351 (430)
++++ ++++++.+.+ .+..+ ..++ ...++..++..+.. .|++++.++..++++++++.|.+..
T Consensus 308 ~l~~~~~~~~~~l~~---~~~g~--------~~~~----~~~~~~aal~~l~~-~~~~~~~~~~~~~~~~l~~~L~~~~~ 371 (456)
T 2z67_A 308 LVYSTDAEFIKEISL---SYPGR--------ASAT----PVVNTLVSLLSMGS-KNYLELVKNQKNSKKLLDELLNDLSK 371 (456)
T ss_dssp EEEESCHHHHHHHHT---TSCSC--------BCSH----HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCHHHHhhcCc---CCCCC--------CCCC----HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999 4677765532 22211 1112 24445556665543 4789999999999999999999753
Q ss_pred --CceecCCCCCCCccceEEEEc--CCCchhHHHHHHHHHcCC---eec------CC----CCCCCeeEEeecCCCCHHH
Q 043610 352 --GFYKCPVEKSVRSFMNVPFTL--EKSDLEAEFVKEAAKEKM---VQL------KG----HRSVGGMRASIYNAMPLAG 414 (430)
Q Consensus 352 --G~~~~~~~~~~rs~~iv~f~~--~~~~~~~~~~~~L~~~Gi---~~~------~g----~~~~g~iRis~~~~~t~ed 414 (430)
|+.+++ +. .+++|.+ ++ ...++.++|.++|+ .+. .| ....+++|+|++.++|++|
T Consensus 372 ~~g~~v~~--~~----~~v~~~~~~~~--~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~ee 443 (456)
T 2z67_A 372 KTGGKFLD--VE----SPIASCISVNS--DPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTED 443 (456)
T ss_dssp HSSCCBCC--CC----CSSEEEEECSS--CHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHH
T ss_pred ccCCEecC--CC----CeEEEEEeccc--HHHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcCCCHHH
Confidence 765543 22 2456666 43 22378888988875 232 01 1124689999999999999
Q ss_pred HHHHHHHHHHHH
Q 043610 415 VEKLVAFMKDFQ 426 (430)
Q Consensus 415 v~~ll~~L~~~~ 426 (430)
|++++++|++++
T Consensus 444 id~~l~~L~~~~ 455 (456)
T 2z67_A 444 IVNSVSKLEKIL 455 (456)
T ss_dssp HHHHHHHHHTC-
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
No 80
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.93 E-value=1.3e-24 Score=219.56 Aligned_cols=330 Identities=13% Similarity=0.035 Sum_probs=226.0
Q ss_pred CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcH--HHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCcH
Q 043610 70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGK--EFKSIIEKAESDLRALLNIP--QEYSVLFLQGGA 143 (430)
Q Consensus 70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~--~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~ga 143 (430)
.+++|..|- .+.++.|++++.+.+.+.. .+ ..+++. ...+..+++.+.+++.+|.+ ++.+|++ ++|+
T Consensus 38 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~-----~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~-~~g~ 110 (429)
T 1yiz_A 38 KPLNLGQGFPDYHAPKYALNALAAAANSPD-PL-----ANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLV-TVGA 110 (429)
T ss_dssp CCEECCSSSCSSCCCHHHHHHHHHHHTCSC-GG-----GGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEE-ESHH
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHhccc-cC-----ccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEE-ecCh
Confidence 355555542 2468899999998875421 01 111111 12344445555566666853 3215666 4899
Q ss_pred HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCc------CCCCCCccccc--cCCCccEEEE
Q 043610 144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEK------YTKIPNFDALE--QNPDAKYLHI 214 (430)
Q Consensus 144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~------~g~~~d~~~l~--i~~~~~lv~i 214 (430)
+++++.++..++++||+|++..+++.+.. ..++..| +++.++...+.. .+..+|+++++ +++++++|++
T Consensus 111 ~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~ 188 (429)
T 1yiz_A 111 YEALYATIQGHVDEGDEVIIIEPFFDCYE--PMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIII 188 (429)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCchhHH--HHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEE
Confidence 99999999999899999998888777643 3455667 777777643100 01236788887 7788999999
Q ss_pred eecCCCccccCC-----CCccc-cCCCcEEEEeccCcCCC------Ccc-ccc---cccEEEeCCCccccCCc--cEEEE
Q 043610 215 CANETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCS------KPV-DVT---RFGVIYAGAQKNVGPSG--VTIVI 276 (430)
Q Consensus 215 ~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~------~~i-dl~---~~d~~~~s~~K~~gp~G--~g~l~ 276 (430)
++++|+||.+++ +|.++ +++|+++|+|++|+... .++ .+. +.++++.|++|++|++| +|+++
T Consensus 189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~ 268 (429)
T 1yiz_A 189 NTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAY 268 (429)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEE
T ss_pred CCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEE
Confidence 999999999998 34454 58899999999987421 122 222 23689999999999889 99999
Q ss_pred EcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHH-----HHHhcCHHHHHHHHHHHHHHHHHHHHccC
Q 043610 277 VRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY-----LLELGGLNEVEKMNRKKAELLYNVIDGSN 351 (430)
Q Consensus 277 v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~-----l~~~~g~~~v~~~~~~l~~~l~~~l~~~~ 351 (430)
+++++++.+... .. ...++.+...+.++..+|+. ......++.++++++++++++.+.|.+ .
T Consensus 269 ~~~~~~~~l~~~-----------~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~ 335 (429)
T 1yiz_A 269 GPEALLKNLQMV-----------HQ-NCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAE-V 335 (429)
T ss_dssp SCHHHHHHHHHH-----------HH-TTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred eCHHHHHHHHHH-----------Hh-hcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHh-C
Confidence 999887754210 00 11246677778888888876 211234788999999999999999987 4
Q ss_pred CceecCCCCCCCccceEEEEcCCCc-----------hhH-HHHHHHH-HcCCeecCCCCC---------CCeeEEeecCC
Q 043610 352 GFYKCPVEKSVRSFMNVPFTLEKSD-----------LEA-EFVKEAA-KEKMVQLKGHRS---------VGGMRASIYNA 409 (430)
Q Consensus 352 G~~~~~~~~~~rs~~iv~f~~~~~~-----------~~~-~~~~~L~-~~Gi~~~~g~~~---------~g~iRis~~~~ 409 (430)
|+.+.. + .....+.+.+++.. .+. ++.++|. ++||.+.+|... .+++|||+..
T Consensus 336 g~~~~~--~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~- 410 (429)
T 1yiz_A 336 GMNPTV--P--QGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFK- 410 (429)
T ss_dssp TCEEEE--C--SBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCS-
T ss_pred CCcccC--C--CcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecC-
Confidence 777653 1 12345667776420 233 6888775 789998775311 4589999984
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 043610 410 MPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 410 ~t~edv~~ll~~L~~~~~ 427 (430)
++++|+++++.|+++++
T Consensus 411 -~~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 411 -KDENLQKAAEILRKWKG 427 (429)
T ss_dssp -CHHHHHHHHHHHHHHSC
T ss_pred -CHHHHHHHHHHHHHhcc
Confidence 89999999999998764
No 81
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.93 E-value=1.9e-24 Score=222.36 Aligned_cols=341 Identities=11% Similarity=-0.012 Sum_probs=226.6
Q ss_pred CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCc---------EEEE
Q 043610 68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEY---------SVLF 138 (430)
Q Consensus 68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~---------~vv~ 138 (430)
.++.+.+-+++...|..+.+.+...+. .++. .+..++...++.+++.+.+++++|.+.+. ..++
T Consensus 78 ~p~~~~~~~~~~~~~~~~~~~~~~~~n---~~~~----~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~ 150 (481)
T 4e1o_A 78 SPHMHAYYPALTSWPSLLGDMLADAIN---CLGF----TWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVL 150 (481)
T ss_dssp STTBCSSSCCCCCHHHHHHHHHHHHHC---CCCS----STTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEE
T ss_pred CCCeeEeCCCCCCHHHHHHHHHHHHhC---cccC----CcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEE
Confidence 456677777776666555555555442 1111 12346788888899999999999998532 4455
Q ss_pred EeCcHHHHHHHHHhhcC-------------------CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCC
Q 043610 139 LQGGATTQFAAVPLNLC-------------------TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIP 198 (430)
Q Consensus 139 ~~~gaT~a~~~~~~sl~-------------------~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~ 198 (430)
++|||+++..++.... .+++.|++....|++. .+.++..| +++.++..+ . ..+
T Consensus 151 -~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~~~~~~g~~~~~v~~~~---~-~~~ 223 (481)
T 4e1o_A 151 -QSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSV--EKAGLISLVKMKFLPVDD---N-FSL 223 (481)
T ss_dssp -ESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHH--HHHHHHHTCEEEEECCCT---T-SCC
T ss_pred -eCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHH--HHHHHhCCCceEEEEcCC---C-CcC
Confidence 5789999987766542 1455666555666653 34444557 777887642 2 358
Q ss_pred Cccccc--cCCC------ccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcc--------ccccccEE
Q 043610 199 NFDALE--QNPD------AKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV--------DVTRFGVI 259 (430)
Q Consensus 199 d~~~l~--i~~~------~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i--------dl~~~d~~ 259 (430)
|+++|+ ++++ +.+|++++++|++|.+.| +|+++ +++|++++||++++.+.... .++..|++
T Consensus 224 d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi 303 (481)
T 4e1o_A 224 RGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSF 303 (481)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEE
T ss_pred CHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEE
Confidence 898887 5433 678999999999999988 78886 68999999999998764321 12334899
Q ss_pred EeCCCcccc-CCccEEEEEcHHH-HhccCCCCCccccccch-----hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHH
Q 043610 260 YAGAQKNVG-PSGVTIVIVRKDL-LGNAQDKTPLMLDYKIH-----DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEV 332 (430)
Q Consensus 260 ~~s~~K~~g-p~G~g~l~v~~~~-~~~~~~~~p~~~~~~~~-----~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v 332 (430)
++++|||++ |.|+|+++++++. +.......+.|+..... .......++.+ +....+..+++.+.. .|++++
T Consensus 304 ~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~al~~~g~-~g~~~~ 381 (481)
T 4e1o_A 304 TFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRR-FRSVKLWFVIRSFGV-KNLQAH 381 (481)
T ss_dssp EECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCC-CTHHHHHHHHHHHHH-HHHHHH
T ss_pred EEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCcccccccCCCC-ccHHHHHHHHHHhHH-HHHHHH
Confidence 999999996 9999999998654 33322223333311100 00001112222 233455556665543 479999
Q ss_pred HHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc-hhHHHHHHHHHcCCeec-CCC-CCCCeeEEeecCC
Q 043610 333 EKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD-LEAEFVKEAAKEKMVQL-KGH-RSVGGMRASIYNA 409 (430)
Q Consensus 333 ~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~-~~~~~~~~L~~~Gi~~~-~g~-~~~g~iRis~~~~ 409 (430)
.++..++++++++.|++..|++++. ++ .. .+++|.+++.+ ...++.++|.++|++.. ++. .....+|+++.++
T Consensus 382 ~~~~~~~a~~l~~~L~~~~g~~~~~-~~--~~-~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~ 457 (481)
T 4e1o_A 382 VRHGTEMAKYFESLVRNDPSFEIPA-KR--HL-GLVVFRLKGPNSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQ 457 (481)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEECCS-CC--CS-SEEEEEESSCHHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCT
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEec-CC--ce-eEEEEEeCCchHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCC
Confidence 9999999999999999866998863 22 23 47889886432 23378889988885533 221 1123699998875
Q ss_pred -CCHHHHHHHHHHHHHHHHh
Q 043610 410 -MPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 410 -~t~edv~~ll~~L~~~~~~ 428 (430)
++++||++++++|++++++
T Consensus 458 ~tt~~di~~~~~~i~~~~~~ 477 (481)
T 4e1o_A 458 FTTRDDILRDWNLIRDAATL 477 (481)
T ss_dssp TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 4899999999999998764
No 82
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.93 E-value=6e-24 Score=219.45 Aligned_cols=340 Identities=11% Similarity=-0.017 Sum_probs=223.0
Q ss_pred CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH
Q 043610 70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA 149 (430)
Q Consensus 70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~ 149 (430)
..|+.....++.++.+++++.....+. +.. .+..++...++.+++++.+++++|.+++.+++|+ +|+|+++..
T Consensus 101 ~~yl~~~~~~~~~~~v~~~~~~~~~n~--~~~----~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t-~ggt~a~~~ 173 (497)
T 2qma_A 101 PDCIAHLHTPPLMPAVAAEAMIAALNQ--SMD----SWDQASSATYVEQKVVNWLCDKYDLSEKADGIFT-SGGTQSNQM 173 (497)
T ss_dssp TTBCSSSCCCCBHHHHHHHHHHHHHCC--CTT----CGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEE-SSHHHHHHH
T ss_pred CCeeEeCCCCCcHHHHHHHHHHHhhcc--ccc----chhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEc-CCchHHHHH
Confidence 356666666789999999987765431 111 1223466777778889999999999753377765 789999998
Q ss_pred HHhhc----C---------CC------CC-cEEEEeCChhHHHHHHHHHHhC----CceEEecCCCCcCCCCCCccccc-
Q 043610 150 VPLNL----C---------TP------ND-PVDYIVTGSWGDKAFKEAQKFC----NPQVIWSGKAEKYTKIPNFDALE- 204 (430)
Q Consensus 150 ~~~sl----~---------~~------gd-~vl~~~~g~~~~~~~~~a~~~g----~~~~v~~~~~~~~g~~~d~~~l~- 204 (430)
++... + .+ |+ .|++....+++. .+.++..| +++.++..+ . ..+|+++|+
T Consensus 174 al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~--~~~~~~~g~g~~~v~~v~~~~---~-~~~d~~~L~~ 247 (497)
T 2qma_A 174 GLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTV--QKSASWMGLGEKAVMTVDANA---D-GTMDITKLDE 247 (497)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHH--HHHHHHTTSCGGGEEEECBCT---T-SSBCGGGHHH
T ss_pred HHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHH--HHHHHHcCCCcccEEEEecCC---C-CcCCHHHHHH
Confidence 87762 2 12 35 455444556653 23344443 356666532 2 257888887
Q ss_pred -cCC----Ccc--EEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccc----c---ccccEEEeCCCccc
Q 043610 205 -QNP----DAK--YLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVD----V---TRFGVIYAGAQKNV 267 (430)
Q Consensus 205 -i~~----~~~--lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~id----l---~~~d~~~~s~~K~~ 267 (430)
+++ +++ +|++++++|+||.+.| +|.++ +++|+++++|++|+.+..+.+ + +..|++++++|||+
T Consensus 248 ~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l 327 (497)
T 2qma_A 248 VIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLF 327 (497)
T ss_dssp HHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTT
T ss_pred HHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhcc
Confidence 543 244 8899999999999988 78886 689999999999998876555 2 24489999999999
Q ss_pred c-CCccEEEEEcHHH-HhccCCCCCccccccch----hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610 268 G-PSGVTIVIVRKDL-LGNAQDKTPLMLDYKIH----DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE 341 (430)
Q Consensus 268 g-p~G~g~l~v~~~~-~~~~~~~~p~~~~~~~~----~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~ 341 (430)
+ |.|+|+++++++. ++.+.. .+.|+..... .......++... ....+..+++.+. ..|++++.++..++++
T Consensus 328 ~~p~~~G~l~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~r~~-~al~~~~~l~~lg-~~g~~~~~~~~~~~a~ 404 (497)
T 2qma_A 328 YQTISCGALLVNDKSNFKFLLH-HADYLNREHDELPNLVDKSIATTKRF-DALKVFMTMQNVG-PKALGDMYDHLLAQTL 404 (497)
T ss_dssp CCCSSCEEEEESCGGGGGGGCC---------------------CCSCCC-THHHHHHHHHHTC-HHHHHHHHHHHHHHHH
T ss_pred CCCcceEEEEEeCHHHHHHhcC-CchhcCCccccCCCccccCCCCCCch-hHHHHHHHHHHhC-HHHHHHHHHHHHHHHH
Confidence 5 8899999998654 443321 1222211000 000000011111 1123344566543 2478899999999999
Q ss_pred HHHHHHHccCCceecCCCCCCCccceEEEEcCCCc-----hhHHHHHHHHHcCCeecCCCC--CCCeeEEee-cCCCCHH
Q 043610 342 LLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD-----LEAEFVKEAAKEKMVQLKGHR--SVGGMRASI-YNAMPLA 413 (430)
Q Consensus 342 ~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~-----~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~-~~~~t~e 413 (430)
++++.|++..|++++. ++ +. .+++|.+.+.+ ...++.+.|.++|+.+..+.. ..+.+||++ +.+++++
T Consensus 405 ~l~~~L~~~~~~~~~~-~~--~~-~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~e 480 (497)
T 2qma_A 405 EVADMIRTNDQFELLA-EP--SL-STVLFRATHETADLDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCLTTS 480 (497)
T ss_dssp HHHHHHHTCTTEEECS-CC--SS-SEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHH
T ss_pred HHHHHHhhCCCeEEEc-CC--Cc-eEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHH
Confidence 9999999766888763 22 23 46888876422 122577778888988754321 124799998 7789999
Q ss_pred HHHHHHHHHHHHHHhh
Q 043610 414 GVEKLVAFMKDFQAKH 429 (430)
Q Consensus 414 dv~~ll~~L~~~~~~~ 429 (430)
||+++++.|++++++-
T Consensus 481 di~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 481 DFESLLSKINMLAVEL 496 (497)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999988753
No 83
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.93 E-value=2e-24 Score=215.82 Aligned_cols=329 Identities=13% Similarity=0.079 Sum_probs=220.9
Q ss_pred CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCc--HHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCc
Q 043610 69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRG--KEFKSIIEKAESDLRALLNI--PQEYSVLFLQGG 142 (430)
Q Consensus 69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~--~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~g 142 (430)
+++++|+.|- .++++.|++++.+.+.+.. .+ ...+++ ....+..+++.+.+++.+|. +++ +|+++ +|
T Consensus 35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~---~~--~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~-~i~~~-~g 107 (398)
T 3ele_A 35 ENVYDFSIGNPSIPAPQIVNDTIKELVTDYD---SV--ALHGYTSAQGDVETRAAIAEFLNNTHGTHFNAD-NLYMT-MG 107 (398)
T ss_dssp GGCEECCSCCCCSCCCHHHHHHHHHHHHHSC---HH--HHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SS
T ss_pred CCeEEeecCCCCCCCCHHHHHHHHHHHhcCC---cc--ccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChH-HEEEc-cC
Confidence 4566666653 2567899999998876411 00 011111 11234555666677777774 444 67765 78
Q ss_pred HHHHHHHHHhhcCCCC-CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecC
Q 043610 143 ATTQFAAVPLNLCTPN-DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANE 218 (430)
Q Consensus 143 aT~a~~~~~~sl~~~g-d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~ 218 (430)
++++++.++..++++| |+|++..+++.+. ...++..| +++.++..+ .+..+|+++++ +++++++|++++++
T Consensus 108 ~~~al~~~~~~l~~~g~d~vl~~~p~~~~~--~~~~~~~g~~~~~v~~~~---~~~~~d~~~l~~~l~~~~~~v~~~~p~ 182 (398)
T 3ele_A 108 AAASLSICFRALTSDAYDEFITIAPYFPEY--KVFVNAAGARLVEVPADT---EHFQIDFDALEERINAHTRGVIINSPN 182 (398)
T ss_dssp HHHHHHHHHHHHCCSTTCEEEEESSCCTHH--HHHHHHTTCEEEEECCCT---TTSSCCHHHHHHTCCTTEEEEEECSSC
T ss_pred HHHHHHHHHHHHcCCCCCEEEEeCCCchhh--HHHHHHcCCEEEEEecCC---cCCcCCHHHHHHHhCcCCCEEEEcCCC
Confidence 9999999999999999 9999888777664 34566678 777777643 13357888887 77899999999999
Q ss_pred CCccccCC--CCc---cc-cC------CCcEEEEeccCcCCC-----Cccccccc--cEEEeCCCccccCCc--cEEEEE
Q 043610 219 TIHGVEFK--EYP---SA-KN------STGILVADMSSNFCS-----KPVDVTRF--GVIYAGAQKNVGPSG--VTIVIV 277 (430)
Q Consensus 219 t~tG~~~p--ei~---~~-~~------~g~~lvvD~a~s~G~-----~~idl~~~--d~~~~s~~K~~gp~G--~g~l~v 277 (430)
|+||.++| ++. ++ ++ +|+++++|++|+... .+...+.. ++++.|++|++|++| +|++++
T Consensus 183 nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 262 (398)
T 3ele_A 183 NPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLV 262 (398)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEE
Confidence 99999999 444 43 45 899999999987522 23222223 488999999999777 899999
Q ss_pred cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecC
Q 043610 278 RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCP 357 (430)
Q Consensus 278 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~ 357 (430)
++++++...- .. .+... .......+++...+.++..+++ ... ..++++++++++++.|++ .|+.+..
T Consensus 263 ~~~~~~~~~~-~~---~~~~~-~~~~~~~~~~~~~~~a~~~~l~----~~~---~~~~~~~~~~~l~~~L~~-~g~~~~~ 329 (398)
T 3ele_A 263 PDEVYDKAEL-YA---AVCGA-GRALGYVCAPSLFQKMIVKCQG----ATG---DINAYKENRDLLYEGLTR-IGYHCFK 329 (398)
T ss_dssp CTTSTTHHHH-HH---HHHHH-HHHTTCCCSCHHHHHHHTTCTT----CCC---CHHHHHHHHHHHHHHHHH-HTCCEEC
T ss_pred cchhhhHHHH-HH---HHHHH-hhhccccCCCHHHHHHHHHHhc----CHH---HHHHHHHHHHHHHHHHHH-cCCeecC
Confidence 8875432000 00 00000 0011123556666666555553 111 467788888999999987 4776653
Q ss_pred CCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 358 VEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 358 ~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
+ .....+.+.+++. ...++.+.|.++||.+.+|.. ..+++|||++ +++++++++++.|++++++.
T Consensus 330 --~--~~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~~~ 396 (398)
T 3ele_A 330 --P--DGAFYMFVKALED-DSNAFCEKAKEEDVLIVAADGFGCPGWVRISYC--VDREMIKHSMPAFEKIYKKY 396 (398)
T ss_dssp --C--SBSSEEEEECSSS-CHHHHHHHHHTTTEECEESGGGTCTTEEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred --C--CeeEEEEEEcCCC-CHHHHHHHHHHCCEEEeCccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 1 2333356677642 233788899999999887643 2468999996 59999999999999988753
No 84
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.93 E-value=4.3e-24 Score=221.37 Aligned_cols=301 Identities=13% Similarity=-0.000 Sum_probs=220.5
Q ss_pred cHHHHHHHHHHHHHHHHHhCCCC--CcEE--EEEeCcHHHHHHHHHhhcCCCC--------CcEEEEeCChhHHHHHHHH
Q 043610 110 GKEFKSIIEKAESDLRALLNIPQ--EYSV--LFLQGGATTQFAAVPLNLCTPN--------DPVDYIVTGSWGDKAFKEA 177 (430)
Q Consensus 110 ~~~~~~~~~~~r~~la~l~g~~~--~~~v--v~~~~gaT~a~~~~~~sl~~~g--------d~vl~~~~g~~~~~~~~~a 177 (430)
.+...++.+++++.+++++|.+. + ++ +++ +|+|+++..++..+..+| |+|++..+.+.+. ...+
T Consensus 134 ~p~~~~le~~l~~~la~~~g~~~~~~-~v~~~~t-~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~--~~~~ 209 (514)
T 3mad_A 134 WPSTAKFEAEVVAMTAHMLGGDAAGG-TVCGTVT-SGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAF--DKAA 209 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHTTGGGGTS-CCEEEEE-SSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHH--HHHH
T ss_pred ChHHHHHHHHHHHHHHHHcCCCCccC-CcceEEc-CcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHH--HHHH
Confidence 45666777788999999999973 2 44 664 789999999998886555 8888777766663 3456
Q ss_pred HHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--
Q 043610 178 QKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK-- 249 (430)
Q Consensus 178 ~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~-- 249 (430)
+..| +++.++..+ .+ .+|+++|+ +++++++|++++++|+||.+.| +|.++ +++|+++++|++|+.+..
T Consensus 210 ~~~G~~v~~v~~~~---~~-~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~ 285 (514)
T 3mad_A 210 QYFGIKLVRTPLDA---DY-RADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPW 285 (514)
T ss_dssp HHHTCEEEEECBCT---TS-CBCHHHHHHHCCTTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHH
T ss_pred HHcCCeeEEeeeCC---CC-CCCHHHHHHHhccCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchh
Confidence 6678 877787643 22 57888887 7889999999999999999999 78886 689999999999875432
Q ss_pred ---------ccccc--cccEEEeCCCccc-cCCccEEEEEcHHHHhccCCCCCccccccc-hhhcCCCCCCccHHHHHHH
Q 043610 250 ---------PVDVT--RFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPLMLDYKI-HDENNSLYNTPPCYCIYMC 316 (430)
Q Consensus 250 ---------~idl~--~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~T~~~~~~~a~ 316 (430)
+++.. ..|++++++|||+ |+.|+|+++++++.+....... ..+|.. ........|+++.....++
T Consensus 286 ~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~gs~~~~~~~a~ 363 (514)
T 3mad_A 286 AERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFI--AADWPGGLYFSPTFAGSRPGALSATA 363 (514)
T ss_dssp HHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEE--ESSCTTCSEEESSSCSSCCHHHHHHH
T ss_pred HHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCHHHhcccccc--ccccCCCcccCCccCCCCchHHHHHH
Confidence 34433 3479999999996 6889999999887655421100 001110 0011223467777778888
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCC
Q 043610 317 GLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGH 396 (430)
Q Consensus 317 ~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~ 396 (430)
..+++.+.. .+++++.++..++++++++.|++..|++++. .+ . .++.|..++. ...++.+.|.++||.+ .|.
T Consensus 364 ~aal~~l~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~---~-~~~~~~~~~~-~~~~l~~~L~~~Gi~v-~g~ 435 (514)
T 3mad_A 364 WAAMLSLGE-EGYLDATRRILQAADRLKAGVRAIPSLKILG-DP---L-WVIAVASDEL-NIYQVMEEMAGRGWRL-NGL 435 (514)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTSTTCEESS-CC---S-SEEEEECSSS-CHHHHHHHHHTTTCBC-EEE
T ss_pred HHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHhhCCCeEEeC-CC---e-EEEEEeCCCC-CHHHHHHHHHhcCCEe-ccC
Confidence 888887764 4789999999999999999999866888763 22 2 3566766431 1237999999999987 444
Q ss_pred CCCCeeEEeecCC-CCHHHHHHHHHHHHHHHHh
Q 043610 397 RSVGGMRASIYNA-MPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 397 ~~~g~iRis~~~~-~t~edv~~ll~~L~~~~~~ 428 (430)
...+.+|+++... +++++++++++.|++++++
T Consensus 436 ~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~ 468 (514)
T 3mad_A 436 HRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQ 468 (514)
T ss_dssp TTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 4456799999854 4679999999999988753
No 85
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.93 E-value=5.8e-25 Score=219.94 Aligned_cols=331 Identities=13% Similarity=0.085 Sum_probs=222.9
Q ss_pred ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCC-CcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH
Q 043610 71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSH-RGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA 149 (430)
Q Consensus 71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~-~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~ 149 (430)
.+++.++..++|+.|++++.+.+.+....|... .... ..+...++.+.+|+.+++++|.++ ..+++ ++||+++..
T Consensus 25 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~r~~la~~~g~~~--~~i~~-~sGt~a~~~ 100 (405)
T 2vi8_A 25 KIELIASENFVSRAVMEAQGSVLTNKYAEGYPG-RRYYGGCEYVDIVEELARERAKQLFGAEH--ANVQP-HSGAQANMA 100 (405)
T ss_dssp SEECCTTCCCCCHHHHHHHTSGGGGCCCCEETT-EESSSCCHHHHHHHHHHHHHHHHHHTCSE--EECCC-SSHHHHHHH
T ss_pred ceeeccCcccCCHHHHHHHHHHhhcccccCCCC-ccccccchHHHHHHHHHHHHHHHHhCCCc--eEEEe-cCcHHHHHH
Confidence 344446667779999999998875321111110 0111 124455566678999999999985 44444 456999999
Q ss_pred HHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC---CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCc
Q 043610 150 VPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC---NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIH 221 (430)
Q Consensus 150 ~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g---~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~t 221 (430)
++..++++||+|++..+.+.+.. +.. ....| ++..++..+ .+..+|+++++ +++ ++++|+++. +..
T Consensus 101 a~~~~~~~gd~Vl~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~---~~~~~d~~~l~~~i~~~~~~~v~~~~--~~~ 174 (405)
T 2vi8_A 101 VYFTVLEHGDTVLGMNLSHGGHLTHGSP-VNFSGVQYNFVAYGVDP---ETHVIDYDDVREKARLHRPKLIVAAA--AAY 174 (405)
T ss_dssp HHHHHCCTTCEEEEECGGGTCCTTTTCT-TSHHHHHSEEEEECBCT---TTCSBCHHHHHHHHHHHCCSEEEECC--SSC
T ss_pred HHHHhcCCCCEEEEecccccchhcccch-hhhccceeEEEeccccc---ccCCcCHHHHHHHHHhcCCeEEEEeC--CCC
Confidence 99999999999998775543321 100 01112 333343321 12247888887 554 788888743 334
Q ss_pred cccCC--CCccc-cCCCcEEEEeccCcCCCCccc-----cccccEEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCcc
Q 043610 222 GVEFK--EYPSA-KNSTGILVADMSSNFCSKPVD-----VTRFGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLM 292 (430)
Q Consensus 222 G~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~id-----l~~~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~ 292 (430)
|...+ +|.++ +++|+++++|++|++|..+.+ +...|++++|+||++| |.| |++++++++++.+.+..
T Consensus 175 ~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~~~~~~l~~~~--- 250 (405)
T 2vi8_A 175 PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRG-GMILCQEQFAKQIDKAI--- 250 (405)
T ss_dssp CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSC-EEEEECHHHHHHHHHHH---
T ss_pred CccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCC-eEEEEcHHHHHHHHhhh---
Confidence 66666 67775 688999999999986543221 2245799999999996 999 99999988876543210
Q ss_pred ccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEc
Q 043610 293 LDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTL 372 (430)
Q Consensus 293 ~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~ 372 (430)
.....++++...+.++.++++.+.+ .+++++.++.+++++++++.|.+ .|+++... . ..+ ..+.+.+
T Consensus 251 --------~~~~~~~~~~~~~aa~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~-~-~~~-~~~~~~~ 317 (405)
T 2vi8_A 251 --------FPGIQGGPLMHVIAAKAVAFGEALQ-DDFKAYAKRVVDNAKRLASALQN-EGFTLVSG-G-TDN-HLLLVDL 317 (405)
T ss_dssp --------TTTTCSSCCHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGG-S-CSS-SEEEEEC
T ss_pred --------cccccCCCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHh-CCCeEecC-C-CCc-eEEEEEc
Confidence 0112367778788888888887652 36889999999999999999997 48877631 1 123 3566777
Q ss_pred CCCchhH-HHHHHHHHcCCeecCCC--------CCCCeeEEeecC----CCCHHHHHHHHHHHHHHHHh
Q 043610 373 EKSDLEA-EFVKEAAKEKMVQLKGH--------RSVGGMRASIYN----AMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 373 ~~~~~~~-~~~~~L~~~Gi~~~~g~--------~~~g~iRis~~~----~~t~edv~~ll~~L~~~~~~ 428 (430)
++.+.+. ++.+.|.++||.+.+|. ...+++|||++. .++++|+++++++|++++++
T Consensus 318 ~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 386 (405)
T 2vi8_A 318 RPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKN 386 (405)
T ss_dssp GGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhc
Confidence 6322233 68888988999977643 113579999986 46799999999999998753
No 86
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.93 E-value=1.7e-24 Score=218.09 Aligned_cols=331 Identities=11% Similarity=0.033 Sum_probs=227.2
Q ss_pred CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCc--HHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCc
Q 043610 69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRG--KEFKSIIEKAESDLRALLNIP--QEYSVLFLQGG 142 (430)
Q Consensus 69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~--~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~g 142 (430)
+.+++|+.|- .++|+.|++++.+.+.+.. . ..+++ ....+..+.+.+.+.+.+|.+ ++.+|+++ +|
T Consensus 28 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~----~---~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~-~g 99 (422)
T 3fvs_A 28 HDVVNLGQGFPDFPPPDFAVEAFQHAVSGDF----M---LNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVT-VG 99 (422)
T ss_dssp SCCEECCCSSCSSCCCHHHHHHHHHHHHSCG----G---GGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEE-SH
T ss_pred CCceEeCCCCCCCCCCHHHHHHHHHHHhCCC----c---cCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEE-CC
Confidence 3566776655 3578999999998876411 0 11111 122344556666666666654 31267765 89
Q ss_pred HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCC----CC----cCCCCCCccccc--cCCCccE
Q 043610 143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGK----AE----KYTKIPNFDALE--QNPDAKY 211 (430)
Q Consensus 143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~----~~----~~g~~~d~~~l~--i~~~~~l 211 (430)
++++++.++..++++||+|++..+.+.+.. ..++..| +++.++... +. ..+..+|+++++ +++++++
T Consensus 100 ~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~ 177 (422)
T 3fvs_A 100 GYGALFTAFQALVDEGDEVIIIEPFFDCYE--PMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKA 177 (422)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEE
T ss_pred hHHHHHHHHHHHcCCCCEEEEcCCCchhhH--HHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCceE
Confidence 999999999999999999999888876643 4556677 777777643 00 012246778887 6789999
Q ss_pred EEEeecCCCccccCC-----CCccc-cCCCcEEEEeccCcC----CCCccccccc------cEEEeCCCccccCCc--cE
Q 043610 212 LHICANETIHGVEFK-----EYPSA-KNSTGILVADMSSNF----CSKPVDVTRF------GVIYAGAQKNVGPSG--VT 273 (430)
Q Consensus 212 v~i~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~----G~~~idl~~~------d~~~~s~~K~~gp~G--~g 273 (430)
|++++++|+||.+++ +|.++ +++|+++++|++|+. |..+.++..+ .+++.|++|++|++| +|
T Consensus 178 v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G 257 (422)
T 3fvs_A 178 LVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVG 257 (422)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCE
T ss_pred EEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEE
Confidence 999999999999997 34554 588999999999875 3233333222 378899999999778 89
Q ss_pred EEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH-----HhcCHHHHHHHHHHHHHHHHHHHH
Q 043610 274 IVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL-----ELGGLNEVEKMNRKKAELLYNVID 348 (430)
Q Consensus 274 ~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~-----~~~g~~~v~~~~~~l~~~l~~~l~ 348 (430)
++++++++++.+.. . .. ...++++...++++..+|+... ....++.+.++++++++++++.|.
T Consensus 258 ~~~~~~~~~~~~~~-------~----~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 325 (422)
T 3fvs_A 258 WVLGPDHIMKHLRT-------V----HQ-NSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQ 325 (422)
T ss_dssp EEECCHHHHHHHHH-------H----HH-TTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCHHHHHHHHH-------H----Hh-hccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988775421 0 00 1224667788888888887411 123578899999999999999999
Q ss_pred ccCCceecCCCCCCCccceEEEEcCCCch-------------hHHHHHHH-HHcCCeecCCCC---------CCCeeEEe
Q 043610 349 GSNGFYKCPVEKSVRSFMNVPFTLEKSDL-------------EAEFVKEA-AKEKMVQLKGHR---------SVGGMRAS 405 (430)
Q Consensus 349 ~~~G~~~~~~~~~~rs~~iv~f~~~~~~~-------------~~~~~~~L-~~~Gi~~~~g~~---------~~g~iRis 405 (430)
+ .|+.+.. + . ....+.+.++.... ..++...| +++||.+.+|.. ..+++|||
T Consensus 326 ~-~g~~~~~--~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis 400 (422)
T 3fvs_A 326 S-VGLKPII--P-Q-GSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFC 400 (422)
T ss_dssp T-TTCEEEB--C-S-BSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEE
T ss_pred H-cCCeecC--C-C-eeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEE
Confidence 7 5887653 1 1 22234444432000 23677765 567999877542 14689999
Q ss_pred ecCCCCHHHHHHHHHHHHHHHHh
Q 043610 406 IYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 406 ~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
+.. ++++++++++.|++++++
T Consensus 401 ~~~--~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 401 FVK--DEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp CCC--CHHHHHHHHHHHHHHHHC
T ss_pred ecC--CHHHHHHHHHHHHHHHhh
Confidence 886 999999999999998764
No 87
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.1e-24 Score=221.95 Aligned_cols=327 Identities=14% Similarity=0.091 Sum_probs=224.9
Q ss_pred CCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcH--HHHHHHHHHHHHHHHHhCC--CCCcEEEEEeC
Q 043610 68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGK--EFKSIIEKAESDLRALLNI--PQEYSVLFLQG 141 (430)
Q Consensus 68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~--~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~ 141 (430)
.+++++|+.|- .+.|+.|++++.+.+.+. + ..++++ ...++.+++.+.+++.+|. +++ +|+++ +
T Consensus 56 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~---~-----~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t-~ 125 (447)
T 3b46_A 56 GRELINLGQGFFSYSPPQFAIKEAQKALDIP---M-----VNQYSPTRGRPSLINSLIKLYSPIYNTELKAE-NVTVT-T 125 (447)
T ss_dssp TSCCEECCCCSCSSCCCHHHHHHHHHHTTSG---G-----GGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGG-GEEEE-S
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhCc---C-----CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChh-hEEEe-C
Confidence 45678887774 346789999998887531 1 112211 1223333444444444564 344 67664 8
Q ss_pred cHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCC--------cCCCCCCccccc--cCCCcc
Q 043610 142 GATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAE--------KYTKIPNFDALE--QNPDAK 210 (430)
Q Consensus 142 gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~--------~~g~~~d~~~l~--i~~~~~ 210 (430)
|+++|+..++.+++++||+|++..+.+.+.. ..++..| +++.++...+. ..+..+|+++|+ ++++++
T Consensus 126 G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 203 (447)
T 3b46_A 126 GANEGILSCLMGLLNAGDEVIVFEPFFDQYI--PNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTK 203 (447)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEE
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCchhHH--HHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCe
Confidence 8999999999999999999999887776642 3456677 77777764310 001246788887 678899
Q ss_pred EEEEeecCCCccccCC-----CCccc-cCCCcEEEEeccCcCCCC-----cc-cc----ccccEEEeCCCccccCCc--c
Q 043610 211 YLHICANETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCSK-----PV-DV----TRFGVIYAGAQKNVGPSG--V 272 (430)
Q Consensus 211 lv~i~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~-----~i-dl----~~~d~~~~s~~K~~gp~G--~ 272 (430)
+|++++++|+||.+++ +|.++ +++|+++++|++|+.... ++ .+ .+.++++.|++|++|++| +
T Consensus 204 ~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~ri 283 (447)
T 3b46_A 204 AVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRI 283 (447)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCC
T ss_pred EEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhh
Confidence 9999999999999987 35554 589999999999875321 21 12 123589999999999889 9
Q ss_pred EEEEE-cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC
Q 043610 273 TIVIV-RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN 351 (430)
Q Consensus 273 g~l~v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~ 351 (430)
|++++ ++++++.+.. .. . ...++.+.+.++++..+|+....+..++.++++++++++++.+.|.+ .
T Consensus 284 G~~~~~~~~l~~~l~~-------~~---~--~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~ 350 (447)
T 3b46_A 284 GWVLSLNAELLSYAAK-------AH---T--RICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDE-L 350 (447)
T ss_dssp EEEECSCHHHHHHHHH-------HH---H--HHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred EEEEeCCHHHHHHHHH-------HH---h--hccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHH-C
Confidence 99999 8888775421 00 0 01235677788888888886533345788999999999999999997 4
Q ss_pred CceecCCCCCCCccceEEEEcCCC--------------chhH-HHHHHHH-HcCCeecCCCCC---------CCeeEEee
Q 043610 352 GFYKCPVEKSVRSFMNVPFTLEKS--------------DLEA-EFVKEAA-KEKMVQLKGHRS---------VGGMRASI 406 (430)
Q Consensus 352 G~~~~~~~~~~rs~~iv~f~~~~~--------------~~~~-~~~~~L~-~~Gi~~~~g~~~---------~g~iRis~ 406 (430)
|+.+.. + .....+.+.+++. ..+. ++.++|. ++||.+.+|... .+++|||+
T Consensus 351 g~~~~~--~--~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~ 426 (447)
T 3b46_A 351 GLPYTA--P--EGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAV 426 (447)
T ss_dssp TCCEEC--C--SBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEEC
T ss_pred CCeecC--C--CeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEE
Confidence 776642 1 1223345566531 1233 7888875 579998776321 46899999
Q ss_pred cCCCCHHHHHHHHHHHHHH
Q 043610 407 YNAMPLAGVEKLVAFMKDF 425 (430)
Q Consensus 407 ~~~~t~edv~~ll~~L~~~ 425 (430)
.. ++++++++++.|+++
T Consensus 427 ~~--~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 427 CK--DDAYLENAVERLKLL 443 (447)
T ss_dssp CS--CHHHHHHHHHHGGGG
T ss_pred eC--CHHHHHHHHHHHHHH
Confidence 85 899999999999874
No 88
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.93 E-value=6.1e-25 Score=220.95 Aligned_cols=326 Identities=14% Similarity=0.063 Sum_probs=222.3
Q ss_pred ceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCcHHHH
Q 043610 71 VFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--QEYSVLFLQGGATTQ 146 (430)
Q Consensus 71 ~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~gaT~a 146 (430)
.++|..|- .+.++.+++++.+.+.+. ...|.. .....+..+++.+.+.+.+|.+ ++++|+++ +|++++
T Consensus 27 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~----~~~y~~---~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t-~g~~~a 98 (411)
T 2o0r_A 27 AVNLGQGFPDEDGPPKMLQAAQDAIAGG----VNQYPP---GPGSAPLRRAIAAQRRRHFGVDYDPETEVLVT-VGATEA 98 (411)
T ss_dssp CEESSCSSCSSCCCHHHHHHHHHHHHTT----CCSCCC---TTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEE-EHHHHH
T ss_pred eeeccCcCCCCCCCHHHHHHHHHHHhcC----CCCCCC---CCCCHHHHHHHHHHHHHHcCCCCCCCceEEEe-CCHHHH
Confidence 45554443 246789999999888641 111111 1112344445556666666853 32157765 789999
Q ss_pred HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccc
Q 043610 147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGV 223 (430)
Q Consensus 147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~ 223 (430)
+..++..++++||+|++..+.+.+.. ..++..| +++.++...+ ..+..+|+++++ +++++++|++++++|+||.
T Consensus 99 l~~~~~~~~~~gd~Vl~~~~~y~~~~--~~~~~~g~~~~~v~~~~~-~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~ 175 (411)
T 2o0r_A 99 IAAAVLGLVEPGSEVLLIEPFYDSYS--PVVAMAGAHRVTVPLVPD-GRGFALDADALRRAVTPRTRALIINSPHNPTGA 175 (411)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECEEE-TTEEECCHHHHHHHCCTTEEEEEEESSCTTTCC
T ss_pred HHHHHHHhcCCCCEEEEeCCCcHhHH--HHHHHcCCEEEEeecccc-ccCCCCCHHHHHHhhccCceEEEEeCCCCCCCC
Confidence 99999999899999999888877643 3456677 7777776421 012237888887 7788999999999999999
Q ss_pred cCC-----CCccc-cCCCcEEEEeccCcCCCC----cccc------ccccEEEeCCCccccCCc--cEEEEEcHHHHhcc
Q 043610 224 EFK-----EYPSA-KNSTGILVADMSSNFCSK----PVDV------TRFGVIYAGAQKNVGPSG--VTIVIVRKDLLGNA 285 (430)
Q Consensus 224 ~~p-----ei~~~-~~~g~~lvvD~a~s~G~~----~idl------~~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~ 285 (430)
++| +|.++ +++|+++++|++|+.+.. +.++ ...|+++.|++|++|++| +|++++++++++.+
T Consensus 176 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l 255 (411)
T 2o0r_A 176 VLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGV 255 (411)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCHHHHHHH
Confidence 998 34444 589999999999986432 2222 223689999999999889 99999999887754
Q ss_pred CCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCcc
Q 043610 286 QDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF 365 (430)
Q Consensus 286 ~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~ 365 (430)
.... .+ ..++.+...++++..+|+... ..++.+.++++++++++++.|++ .|+.+.. + .+.
T Consensus 256 ~~~~----~~--------~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~~g 316 (411)
T 2o0r_A 256 RAAK----QY--------LSYVGGAPFQPAVALALDTED--AWVAALRNSLRARRDRLAAGLTE-IGFAVHD--S--YGT 316 (411)
T ss_dssp HHHH----HH--------HTSCCCTTHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHH-HTCEECC--C--CBS
T ss_pred HHHH----hh--------ccCCCChHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHHH-cCCEecC--C--Cee
Confidence 2200 00 112445556677777787532 25788899999999999999987 4887653 2 133
Q ss_pred ceEEEEcCCC-ch-hHHHHHHHH-HcCCeecCCCC---------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610 366 MNVPFTLEKS-DL-EAEFVKEAA-KEKMVQLKGHR---------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 366 ~iv~f~~~~~-~~-~~~~~~~L~-~~Gi~~~~g~~---------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~ 427 (430)
..+.+.+++. +. ..++.++|. ++||.+.+|.. ..+++|||++. +++|++++++.|+++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~--~~e~i~~~~~~l~~~~~ 394 (411)
T 2o0r_A 317 YFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCK--RDDTLDEAIRRLSVLAE 394 (411)
T ss_dssp SEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCS--CHHHHHHHHHHHGGGGC
T ss_pred EEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 3566777631 02 236888775 67999866421 13579999974 89999999999998765
Q ss_pred h
Q 043610 428 K 428 (430)
Q Consensus 428 ~ 428 (430)
+
T Consensus 395 ~ 395 (411)
T 2o0r_A 395 R 395 (411)
T ss_dssp -
T ss_pred c
Confidence 4
No 89
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.93 E-value=3.6e-24 Score=212.23 Aligned_cols=314 Identities=11% Similarity=0.055 Sum_probs=219.6
Q ss_pred CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHHH
Q 043610 70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGATT 145 (430)
Q Consensus 70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT~ 145 (430)
++++|+.|- .+.|+.|++++.+.+.....-+ . .....+..+++.+.+++.+|. +++ +|+++ +|+++
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~-----~---~~g~~~lr~~la~~l~~~~g~~~~~~-~i~~t-~g~~~ 93 (376)
T 3ezs_A 24 RGLDLGIGEPQFETPKFIQDALKNHTHSLNIYP-----K---SAFEESLRAAQRGFFKRRFKIELKEN-ELIST-LGSRE 93 (376)
T ss_dssp CCCBCSSCCCCSCCCHHHHHHHHTTGGGGGSCC-----C---TTCCHHHHHHHHHHHHHHHSCCCCGG-GEEEE-SSSHH
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHhhhhcCCCC-----C---CCCCHHHHHHHHHHHHHHhCCCCCHH-HEEEC-cCcHH
Confidence 556665543 4578899999988763211100 0 111234455666666667787 444 67765 78999
Q ss_pred HHHHHHhhcCCC--CCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610 146 QFAAVPLNLCTP--NDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI 220 (430)
Q Consensus 146 a~~~~~~sl~~~--gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~ 220 (430)
+++.++..+.++ ||+|++..+++.+. ...++..| +++.++...+ .+ .++ +++ +.+++++|++++++|+
T Consensus 94 al~~~~~~~~~~~~gd~vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~--~~--~~~-~l~~~~~~~~~~v~~~~p~np 166 (376)
T 3ezs_A 94 VLFNFPSFVLFDYQNPTIAYPNPFYQIY--EGAAKFIKAKSLLMPLTKE--ND--FTP-SLNEKELQEVDLVILNSPNNP 166 (376)
T ss_dssp HHHHHHHHHTTTCSSCEEEEEESCCTHH--HHHHHHTTCEEEEEECCGG--GT--SCC-CCCHHHHHHCSEEEECSSCTT
T ss_pred HHHHHHHHHcCCCCCCEEEEecCCcHhH--HHHHHHcCCEEEEcccCCC--CC--cch-hHHhhhccCCCEEEEcCCCCC
Confidence 999999999999 99999888887764 34566677 8888877532 12 333 554 5678999999999999
Q ss_pred ccccCC--CCc---cc-cCCCcEEEEeccCcCCCC---ccccc---------cc--cEEEeCCCccccCCc--cEEEEEc
Q 043610 221 HGVEFK--EYP---SA-KNSTGILVADMSSNFCSK---PVDVT---------RF--GVIYAGAQKNVGPSG--VTIVIVR 278 (430)
Q Consensus 221 tG~~~p--ei~---~~-~~~g~~lvvD~a~s~G~~---~idl~---------~~--d~~~~s~~K~~gp~G--~g~l~v~ 278 (430)
||.++| ++. ++ +++|+++++|++|+.... +..+. .. ++++.|++|++|++| +|+++.+
T Consensus 167 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~ 246 (376)
T 3ezs_A 167 TGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGD 246 (376)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEEC
T ss_pred cCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeC
Confidence 999999 444 43 588999999999885432 22221 22 488999999998777 8999999
Q ss_pred HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC
Q 043610 279 KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV 358 (430)
Q Consensus 279 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~ 358 (430)
+++++.+.. . .....+++|...+.++..+++.. ..++.+.++++++++++.+.|+ |+. .+
T Consensus 247 ~~~~~~~~~-------~-----~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~l~---~~~-~~- 306 (376)
T 3ezs_A 247 SRLLEKYKA-------F-----RAYLGYTSANAIQKASEAAWLDD---RHAEFFRNIYANNLKLARKIFK---NTL-IY- 306 (376)
T ss_dssp HHHHHHHHH-------H-----HTTTCCCCCHHHHHHHHHHHHCS---HHHHHHHHHHHHHHHHHHHHST---TCC-CC-
T ss_pred HHHHHHHHH-------H-----HhhhcCCCChHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHhc---CCC-CC-
Confidence 988776421 0 01123477888888888888742 2468888999999999999886 443 11
Q ss_pred CCCCCccceEEEEcCCCchhHHHHHHHHH-cCCeecCCCC------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 359 EKSVRSFMNVPFTLEKSDLEAEFVKEAAK-EKMVQLKGHR------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 359 ~~~~rs~~iv~f~~~~~~~~~~~~~~L~~-~Gi~~~~g~~------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
.....+.+.+++ ..++.+.|.+ +||.+.+|.. ..+++|||++. +++|++++++.|+++++++
T Consensus 307 ----~~~~~~~~~~~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~--~~~~i~~~l~~l~~~l~~~ 375 (376)
T 3ezs_A 307 ----PYSFYVYLPVQN---GENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY--DTPLLEKPLEIIETYRENH 375 (376)
T ss_dssp ----SBSSEEEEECSC---HHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS--CHHHHHHHHHHHHHHHCC-
T ss_pred ----CcceEEEEECCC---HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC--CHHHHHHHHHHHHHHHHhc
Confidence 122345566652 3478888877 8999876531 24589999985 9999999999999998765
No 90
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.93 E-value=6.9e-24 Score=208.85 Aligned_cols=310 Identities=11% Similarity=0.063 Sum_probs=222.8
Q ss_pred CCCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610 67 QEDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT 144 (430)
Q Consensus 67 ~~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT 144 (430)
..+++++|+.|. .++|+.|++++.+.+.+... +.. ....++|+.++++++++++ +++++ +|+|
T Consensus 24 ~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~----------y~~---~~~~~l~~~la~~~~~~~~-~i~~~-~g~t 88 (361)
T 3ftb_A 24 KGRELLDYSSNINPLGIPKSFLNNIDEGIKNLGV----------YPD---VNYRRLNKSIENYLKLKDI-GIVLG-NGAS 88 (361)
T ss_dssp ----CEETTCCCCTTCSCHHHHTTHHHHHHGGGS----------CCC---TTCHHHHHHHHHHHTCCSC-EEEEE-SSHH
T ss_pred CCCCEEEecCCCCCCCCCHHHHHHHHHHHHHhcC----------CCC---ccHHHHHHHHHHHhCCCcc-eEEEc-CCHH
Confidence 345677777663 45789999999988764211 111 1135788999999998775 77765 8899
Q ss_pred HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610 145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH 221 (430)
Q Consensus 145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t 221 (430)
++++.++..+ |+|++..+.+.+. ...++..| +++.++..+ .+ ..++++++ +++ +++|++++++|+|
T Consensus 89 ~al~~~~~~~----d~vi~~~~~~~~~--~~~~~~~g~~~~~~~~~~---~~-~~~~~~l~~~l~~-~~~v~i~~p~npt 157 (361)
T 3ftb_A 89 EIIELSISLF----EKILIIVPSYAEY--EINAKKHGVSVVFSYLDE---NM-CIDYEDIISKIDD-VDSVIIGNPNNPN 157 (361)
T ss_dssp HHHHHHHTTC----SEEEEEESCCTHH--HHHHHHTTCEEEEEECCT---TS-CCCHHHHHHHTTT-CSEEEEETTBTTT
T ss_pred HHHHHHHHHc----CcEEEecCChHHH--HHHHHHcCCeEEEeecCc---cc-CCCHHHHHHhccC-CCEEEEeCCCCCC
Confidence 9999998887 8999888777664 34566678 888887753 12 35667776 666 9999999999999
Q ss_pred cccCC--CCcc---c-cCCCcEEEEeccCcCCCCc-----ccc-ccc--cEEEeCCCccccCCc--cEEEE-EcHHHHhc
Q 043610 222 GVEFK--EYPS---A-KNSTGILVADMSSNFCSKP-----VDV-TRF--GVIYAGAQKNVGPSG--VTIVI-VRKDLLGN 284 (430)
Q Consensus 222 G~~~p--ei~~---~-~~~g~~lvvD~a~s~G~~~-----idl-~~~--d~~~~s~~K~~gp~G--~g~l~-v~~~~~~~ 284 (430)
|.++| ++.+ + +++|+++++|++|+.+... ... ... .+++.|++|++|++| +|+++ .++++++.
T Consensus 158 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~ 237 (361)
T 3ftb_A 158 GGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAK 237 (361)
T ss_dssp TBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHH
T ss_pred CCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHH
Confidence 99999 4444 3 4899999999998744331 111 112 277889999999777 68888 67888776
Q ss_pred cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCce-ecCCCCCCC
Q 043610 285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFY-KCPVEKSVR 363 (430)
Q Consensus 285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~-~~~~~~~~r 363 (430)
+... ...+++|...++++..+|+.. ..++.+.++++++++++++.|++..|+. +.+ + .
T Consensus 238 ~~~~--------------~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~--~ 296 (361)
T 3ftb_A 238 IKAK--------------QNPWNINCFAEMAAINCLKDT---NYIEESLLWIKKERKRFIEELNKIGFIKRVFS--P--H 296 (361)
T ss_dssp HHTT--------------SCTTCSCHHHHHHHHHTSSCH---HHHHHHHHHHHHHHHHHHHHHHHSSSEEEEEC--C--S
T ss_pred HHhh--------------CCCCCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHhCCCCceecC--C--C
Confidence 4321 112477888888888888742 2578899999999999999999755776 543 1 2
Q ss_pred ccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 364 SFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 364 s~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
+ ..+.+.+++ ....++.+.|.++||.+.+|.. ..+++|||++ +.+|+++++++|+++.+.
T Consensus 297 ~-~~~~~~~~~-~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 297 A-NFVLCRLEN-ISGEKLYDSLLKEDIVIRRCCNFIGLDDSFVRFAIK---DEKKNTKFLRALKGVENN 360 (361)
T ss_dssp S-SEEEEEESS-SCHHHHHHHHHTTTEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHHHT
T ss_pred C-eEEEEEcCC-CCHHHHHHHHHHCCeEEeeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHhc
Confidence 2 345677764 2233799999999999877642 2468999987 899999999999988753
No 91
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.93 E-value=4.2e-25 Score=221.01 Aligned_cols=323 Identities=15% Similarity=0.125 Sum_probs=222.2
Q ss_pred CCceeecCCCC----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610 69 DRVFNFAAGPA----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT 144 (430)
Q Consensus 69 ~~~~l~~~gp~----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT 144 (430)
+.+++|+.|-. ..++.+++++.+.+.+... ....+... ....++|+.+++++|.+++ +|+++ +|++
T Consensus 32 ~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~------~~~~y~~~--~~~~~l~~~la~~~g~~~~-~v~~~-~g~~ 101 (397)
T 2zyj_A 32 PGILSFAGGLPAPELFPKEEAAEAAARILREKGE------VALQYSPT--EGYAPLRAFVAEWIGVRPE-EVLIT-TGSQ 101 (397)
T ss_dssp TTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHH------HHTSCCCT--TCCHHHHHHHHHHHTSCGG-GEEEE-SHHH
T ss_pred CCceecCCCCCCchhCCHHHHHHHHHHHHHhcch------hhhCCCCC--CCCHHHHHHHHHHhCCChh-hEEEe-ccHH
Confidence 45667766532 2567899998887754110 01111111 1234788899999998665 67764 8999
Q ss_pred HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEE-EEeecCC
Q 043610 145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYL-HICANET 219 (430)
Q Consensus 145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv-~i~~~~t 219 (430)
++++.++.++.++||+|++..+++.+.. ..++..| +++.++..+ .+ +|+++++ +++ ++++| ++++++|
T Consensus 102 ~al~~~~~~~~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~---~~--~d~~~l~~~l~~~~~~~v~~~~~~~n 174 (397)
T 2zyj_A 102 QALDLVGKVFLDEGSPVLLEAPSYMGAI--QAFRLQGPRFLTVPAGE---EG--PDLDALEEVLKRERPRFLYLIPSFQN 174 (397)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCHHHH--HHHHTTCCEEEEEEEET---TE--ECHHHHHHHHHHCCCSCEEECCBSCT
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCcHHHH--HHHHHcCCEEEecCcCC---CC--CCHHHHHHHHhhcCCeEEEECCCCcC
Confidence 9999999999899999998887776643 3455677 777776632 22 6788886 554 78887 5789999
Q ss_pred CccccCC--C---Cccc-cCCCcEEEEeccCcCCC----Cccccccc------c--EEEeCCCccccCCc--cEEEEEcH
Q 043610 220 IHGVEFK--E---YPSA-KNSTGILVADMSSNFCS----KPVDVTRF------G--VIYAGAQKNVGPSG--VTIVIVRK 279 (430)
Q Consensus 220 ~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~~idl~~~------d--~~~~s~~K~~gp~G--~g~l~v~~ 279 (430)
+||.++| + |.++ +++|+++++|++|+.+. .+.++..+ + +++.|+||++| +| +|++++++
T Consensus 175 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~ 253 (397)
T 2zyj_A 175 PTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHP 253 (397)
T ss_dssp TTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCH
T ss_pred CCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEecCH
Confidence 9999999 3 4444 58899999999998643 22333332 2 78899999999 66 79999999
Q ss_pred HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc-C-CceecC
Q 043610 280 DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS-N-GFYKCP 357 (430)
Q Consensus 280 ~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~-~-G~~~~~ 357 (430)
++++.+..... ....++ |...+.++..+|+.... ..++++.++++++++++.+.|++. . |+.+..
T Consensus 254 ~~~~~l~~~~~-----------~~~~~~-~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~ 320 (397)
T 2zyj_A 254 EALQKLVQAKQ-----------GADLHT-PMLNQMLVHELLKEGFS-ERLERVRRVYREKAQAMLHALDREVPKEVRYTR 320 (397)
T ss_dssp HHHHHHHHHHH-----------HHHSSC-CHHHHHHHHHHHTTTHH-HHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECC
T ss_pred HHHHHHHHHHH-----------hhcCCC-CHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEcc
Confidence 88776432000 001123 66677777777753210 236788888999999999999863 3 676642
Q ss_pred CCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCC------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 358 VEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHR------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 358 ~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
+ ..+ ..+.+.+++ +.+. ++.+.|.++||.+.+|.. ..+++|||++.. +++|++++++.|++++++
T Consensus 321 --~-~~g-~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~ 392 (397)
T 2zyj_A 321 --P-KGG-MFVWMELPK-GLSAEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYATL-DREGIAEGVRRLGRALKG 392 (397)
T ss_dssp --C-SBS-SEEEEECST-TCCHHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSSS-CHHHHHHHHHHHHHHHHH
T ss_pred --C-Ccc-EEEEEEcCC-CCCHHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHH
Confidence 1 122 345677764 2233 799999989999877532 245799999875 899999999999988764
No 92
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.93 E-value=5.8e-24 Score=212.21 Aligned_cols=322 Identities=10% Similarity=0.031 Sum_probs=224.1
Q ss_pred CCCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC---CCcEEEEEeC
Q 043610 67 QEDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP---QEYSVLFLQG 141 (430)
Q Consensus 67 ~~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~---~~~~vv~~~~ 141 (430)
..+++++|+.|- .+.|+.|++++.+.+....+-+. .....+..+++.+.+++.+|.+ ++.+|+++ +
T Consensus 28 ~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~--------~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t-~ 98 (396)
T 3jtx_A 28 EGMEAVPLHIGEPKHPTPKVITDALTASLHELEKYPL--------TAGLPELRQACANWLKRRYDGLTVDADNEILPV-L 98 (396)
T ss_dssp TTCCCEECSCCSCCSCCCHHHHHHHHHTGGGGGSCCC--------TTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEE-S
T ss_pred cCCCeEEeCCcCCCCCCCHHHHHHHHHHhhhccCCCC--------CCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEc-C
Confidence 345677776654 45788999999987753221110 1112344556667777777853 43257664 8
Q ss_pred cHHHHHHHHHhhcCCCC-----CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEE
Q 043610 142 GATTQFAAVPLNLCTPN-----DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLH 213 (430)
Q Consensus 142 gaT~a~~~~~~sl~~~g-----d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~ 213 (430)
|++++++.++..++++| |+|++..+.+.+.. ..++..| +++.++..+ .+..+|+++++ +.+++++|+
T Consensus 99 g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~--~~~~~~g~~~~~v~~~~---~g~~~d~~~l~~~~~~~~~~v~ 173 (396)
T 3jtx_A 99 GSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYE--GATLLGGGEIHFANCPA---PSFNPDWRSISEEVWKRTKLVF 173 (396)
T ss_dssp SHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHH--HHHHHTTCEEEEEECCT---TTCCCCGGGSCHHHHHTEEEEE
T ss_pred CcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHH--HHHHHcCCEEEEeecCC---CCCccCHHHHHHhhccCcEEEE
Confidence 89999999999998886 68888777765542 3566678 888887732 34457888887 677899999
Q ss_pred EeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCC----Ccccc----------ccccEEEeCCCccccCCc--
Q 043610 214 ICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS----KPVDV----------TRFGVIYAGAQKNVGPSG-- 271 (430)
Q Consensus 214 i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~~idl----------~~~d~~~~s~~K~~gp~G-- 271 (430)
+++++|+||.+++ + |.++ +++|+++++|++|+... .++.. .+.++++.|++|.+|++|
T Consensus 174 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 253 (396)
T 3jtx_A 174 VCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLR 253 (396)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGC
T ss_pred EECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccc
Confidence 9999999999999 4 5554 58899999999987532 23221 122488999999988667
Q ss_pred cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC
Q 043610 272 VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN 351 (430)
Q Consensus 272 ~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~ 351 (430)
+|+++.++++++.+... .. ...+++|...++++..+++. ...++.++++++++++.+.+.|.+.
T Consensus 254 ~G~~~~~~~~~~~~~~~----~~--------~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~l~~~- 317 (396)
T 3jtx_A 254 SGFVAGDAELLKNFLLY----RT--------YHGSAMSIPVQRASIAAWDD---EQHVIDNRRLYQEKFERVIPILQQV- 317 (396)
T ss_dssp CEEEEECHHHHHHHHHH----HH--------HHTCCCCHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHTTT-
T ss_pred eEEEEeCHHHHHHHHHH----Hh--------hcccCCCHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 89999998887764320 00 11246788888888888864 2357888999999999999999863
Q ss_pred CceecCCCCCCCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCC----------CCCeeEEeecCCCCHHHHHHHHH
Q 043610 352 GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHR----------SVGGMRASIYNAMPLAGVEKLVA 420 (430)
Q Consensus 352 G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~----------~~g~iRis~~~~~t~edv~~ll~ 420 (430)
+.+. .+ .....+.+.+++ ....++.+.| +++||.+.+|.. ..+++|||++. ++++++++++
T Consensus 318 -~~~~--~~--~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~--~~~~i~~~l~ 389 (396)
T 3jtx_A 318 -FDVK--LP--DASFYIWLKVPD-GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA--DVATCVKAAE 389 (396)
T ss_dssp -SCCC--CC--SSSSEEEEECTT-SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS--CHHHHHHHHH
T ss_pred -CCcc--CC--CeeEEEEEECCC-CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC--CHHHHHHHHH
Confidence 3322 11 233455667764 2234788888 557999876531 23589999986 8999999999
Q ss_pred HHHHHH
Q 043610 421 FMKDFQ 426 (430)
Q Consensus 421 ~L~~~~ 426 (430)
.|++++
T Consensus 390 ~l~~~l 395 (396)
T 3jtx_A 390 DIVSLY 395 (396)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 998864
No 93
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.93 E-value=5e-24 Score=214.21 Aligned_cols=322 Identities=12% Similarity=0.067 Sum_probs=217.8
Q ss_pred CCceeecCCCC--CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCcHH
Q 043610 69 DRVFNFAAGPA--NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGGAT 144 (430)
Q Consensus 69 ~~~~l~~~gp~--~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~gaT 144 (430)
+.++.|+.|-. +.++.+++++ +.+.+ +...|.. .....+..+.+.+.+.+.+| .+++ +++++ +|+|
T Consensus 43 ~~~i~l~~~~~~~~~~~~v~~a~-~~l~~----~~~~y~~---~~g~~~l~~~la~~~~~~~g~~~~~~-~v~~~-~g~t 112 (409)
T 2gb3_A 43 VRIHHLNIGQPDLKTPEVFFERI-YENKP----EVVYYSH---SAGIWELREAFASYYKRRQRVDVKPE-NVLVT-NGGS 112 (409)
T ss_dssp CEEEECSSCCCCSCCCTHHHHHH-HHTCC----SSCCCCC---TTCCHHHHHHHHHHHHHTSCCCCCGG-GEEEE-SHHH
T ss_pred CCEEeccCCCCCCCCCHHHHHHH-HHHhc----CCCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCHH-HEEEe-CCHH
Confidence 44555555432 4678899999 77642 1111111 11122223333344433344 3344 67765 8999
Q ss_pred HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610 145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH 221 (430)
Q Consensus 145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t 221 (430)
+|++.++..++++||+|++..+.+.+.. ..++..| +++.++..++ .+..+ +++|+ +++++++|++++++|+|
T Consensus 113 ~a~~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~~--~~~~~-~~~l~~~l~~~~~~v~~~~p~npt 187 (409)
T 2gb3_A 113 EAILFSFAVIANPGDEILVLEPFYANYN--AFAKIAGVKLIPVTRRME--EGFAI-PQNLESFINERTKGIVLSNPCNPT 187 (409)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCTHHH--HHHHHHTCEEEEEECCGG--GTSCC-CTTGGGGCCTTEEEEEEESSCTTT
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCchhHH--HHHHHcCCEEEEeccCCC--CCCcc-HHHHHHhhCcCCeEEEECCCCCCC
Confidence 9999999999899999998888876642 3455677 7777776431 12123 67776 67789999999999999
Q ss_pred cccCC-----CCccc-cCCCcEEEEeccCcCCCC---ccc-cc---cccEEEeCCCccccCCc--cEEEEEcH-HHHhcc
Q 043610 222 GVEFK-----EYPSA-KNSTGILVADMSSNFCSK---PVD-VT---RFGVIYAGAQKNVGPSG--VTIVIVRK-DLLGNA 285 (430)
Q Consensus 222 G~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~---~id-l~---~~d~~~~s~~K~~gp~G--~g~l~v~~-~~~~~~ 285 (430)
|.+++ +|.++ +++|+++++|++|+.+.. ++. +. ..|+++.|+||++|++| +|++++++ ++++.+
T Consensus 188 G~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l 267 (409)
T 2gb3_A 188 GVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHA 267 (409)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHH
Confidence 99987 34454 589999999999986543 222 22 33688999999999888 89999998 777654
Q ss_pred CCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCcee-cCCCCCCCc
Q 043610 286 QDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYK-CPVEKSVRS 364 (430)
Q Consensus 286 ~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~-~~~~~~~rs 364 (430)
.. . ... .. +++...+.++..+|+... .+++.+.+++.++++++.+.|.+ .|+++ .. + ..
T Consensus 268 ~~-------~---~~~--~~-~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~--~--~~ 327 (409)
T 2gb3_A 268 MK-------L---AQG--RL-APPLLEQIGSVGLLNLDD--SFFDFVRETYRERVETVLKKLEE-HGLKRFTK--P--SG 327 (409)
T ss_dssp HH-------H---HHH--SC-CCCHHHHHHHHHHHTCCH--HHHHHHHHHHHHHHHHHHHHHHH-TTCCCBCC--C--SB
T ss_pred HH-------H---Hhc--cC-CCCHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHHHHH-cCceeeeC--C--Ce
Confidence 21 0 000 11 567777777777775322 24778889999999999999997 47766 32 2 12
Q ss_pred cceEEEEcCCCchhHHHHHHHHHc------CCeecCCCC-------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 365 FMNVPFTLEKSDLEAEFVKEAAKE------KMVQLKGHR-------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 365 ~~iv~f~~~~~~~~~~~~~~L~~~------Gi~~~~g~~-------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
...+.+.+++ ....++.+.|.++ ||.+.+|.. ..+++||+++ +++++++++++.|++++++
T Consensus 328 ~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~ 401 (409)
T 2gb3_A 328 AFYITAELPV-EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV--LEKDLLSRAIDVLMEGLKM 401 (409)
T ss_dssp SSEEEEECSS-SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCC-CCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 3334456652 1233788888876 999876531 1457999998 7999999999999998764
No 94
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.93 E-value=3.9e-25 Score=221.36 Aligned_cols=336 Identities=14% Similarity=0.083 Sum_probs=227.2
Q ss_pred CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHH-HHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610 69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIE-KAESDLRALLNIPQEYSVLFLQGGATTQF 147 (430)
Q Consensus 69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~-~~r~~la~l~g~~~~~~vv~~~~gaT~a~ 147 (430)
++.+++.+|..++++.|++++.+.+.+....+... .....+....+.++ .+|+.+++++|.++ ..+++ ++||+++
T Consensus 23 ~~~i~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~g~~~~~~~e~~ar~~la~~~g~~~--~~i~~-~sGt~a~ 98 (407)
T 2dkj_A 23 REGLELIASENFVSKQVREAVGSVLTNKYAEGYPG-ARYYGGCEVIDRVESLAIERAKALFGAAW--ANVQP-HSGSQAN 98 (407)
T ss_dssp HTSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETT-EESSSCCHHHHHHHHHHHHHHHHHHTCSE--EECCC-SSHHHHH
T ss_pred hcceeeccCCCCCCHHHHHHHHhhhhcCcccCCCc-ccccCCchHHHHHHHHHHHHHHHHhCCCc--ceEEe-cchHHHH
Confidence 45788888888889999999998875411111110 01111222223333 47789999999975 33444 4567899
Q ss_pred HHHHhhcCCCCCcEEEEeCChhHHHH-HHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEeecCCCcc
Q 043610 148 AAVPLNLCTPNDPVDYIVTGSWGDKA-FKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHICANETIHG 222 (430)
Q Consensus 148 ~~~~~sl~~~gd~vl~~~~g~~~~~~-~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~~~~t~tG 222 (430)
..++..++++||+|++..+.+.+... ...++..| .+..++..-+ +....+|+++++ ++ +++++|++++++++
T Consensus 99 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~-- 175 (407)
T 2dkj_A 99 MAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVR-PDTELIDLEEVRRLALEHRPKVIVAGASAYP-- 175 (407)
T ss_dssp HHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCC-TTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--
T ss_pred HHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCC-cccCccCHHHHHHHHhhcCCeEEEEeccccC--
Confidence 99999988999999987765543310 01122334 3444444211 112247888887 55 48999999777774
Q ss_pred ccCC--CCccc-cCCCcEEEEeccCcCCCCccc-----cccccEEEeCCCccc-cCCccEEEEEc-HHHHhccCCCCCcc
Q 043610 223 VEFK--EYPSA-KNSTGILVADMSSNFCSKPVD-----VTRFGVIYAGAQKNV-GPSGVTIVIVR-KDLLGNAQDKTPLM 292 (430)
Q Consensus 223 ~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~id-----l~~~d~~~~s~~K~~-gp~G~g~l~v~-~~~~~~~~~~~p~~ 292 (430)
...| +|.++ +++|+++++|++|+.|..+.+ ++..|++++|+||++ |+.| |+++++ +++++.+.+..
T Consensus 176 ~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~l~~~~--- 251 (407)
T 2dkj_A 176 RFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRG-GLILSNDPELGKRIDKLI--- 251 (407)
T ss_dssp SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSC-EEEEESCHHHHHHHHHHH---
T ss_pred CCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCc-eEEEECCHHHHHHHHhhh---
Confidence 6667 67775 688999999999987543222 223589999999999 5887 999999 78877643210
Q ss_pred ccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEc
Q 043610 293 LDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTL 372 (430)
Q Consensus 293 ~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~ 372 (430)
.....++++...+.++.++++.+.. .+++++.++.+++++++++.|++ .|+++.. ++ ..+ ..+.+.+
T Consensus 252 --------~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~-~~~-~~~~~~~ 318 (407)
T 2dkj_A 252 --------FPGIQGGPLEHVIAGKAVAFFEALQ-PEFKEYSRLVVENAKRLAEELAR-RGYRIVT-GG-TDN-HLFLVDL 318 (407)
T ss_dssp --------TTTTCSSCCHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHH-TTCEEGG-GS-CSS-SEEEEEC
T ss_pred --------cccccCCCcHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHh-CCceeec-CC-CCc-eEEEEEC
Confidence 0112357777777778888887642 36899999999999999999997 4887763 11 223 3566777
Q ss_pred CCCchhH-HHHHHHHHcCCeecCCCC--------CCCeeEEeecCC----CCHHHHHHHHHHHHHHHHh
Q 043610 373 EKSDLEA-EFVKEAAKEKMVQLKGHR--------SVGGMRASIYNA----MPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 373 ~~~~~~~-~~~~~L~~~Gi~~~~g~~--------~~g~iRis~~~~----~t~edv~~ll~~L~~~~~~ 428 (430)
++.+.+. ++.+.|.++||.+.+|.. ..+++|+|++.+ ++++|+++++++|++++++
T Consensus 319 ~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 319 RPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp GGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 6322233 688889999999876531 135799999753 6899999999999998764
No 95
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.93 E-value=2.3e-24 Score=221.37 Aligned_cols=339 Identities=12% Similarity=0.010 Sum_probs=219.7
Q ss_pred CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCc--------EEEEEe
Q 043610 69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEY--------SVLFLQ 140 (430)
Q Consensus 69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~--------~vv~~~ 140 (430)
++.+.+-+++...+..+.+.+...+ + .++. .+..++...++.+++.+.+++++|.+++. ..+|+
T Consensus 74 p~~~~~~~~~~~~~~~~~~~l~~~~-n--~~~~----~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t- 145 (475)
T 3k40_A 74 PKFHAYFPTANSYPAIVADMLSGAI-A--CIGF----TWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQ- 145 (475)
T ss_dssp TTBCCSSCCCCCHHHHHHHHHHHHH-C--CCSS----SCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEE-
T ss_pred cCceeeCCCCCcHHHHHHHHHHHHh-C--cccc----CccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEc-
Confidence 4555555566545544444544443 2 1111 12236778888889999999999998532 45664
Q ss_pred CcHHHHHHHHHhhcC-------------------CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCc
Q 043610 141 GGATTQFAAVPLNLC-------------------TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNF 200 (430)
Q Consensus 141 ~gaT~a~~~~~~sl~-------------------~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~ 200 (430)
+|||+++..++.... .+++.|++....|++ +.+.++..| +++.++.++ +. +|+
T Consensus 146 ~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s--~~~~~~~~g~~~~~v~~d~----~~-~d~ 218 (475)
T 3k40_A 146 GTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSS--VERAGLLGGVKLRSVQSEN----HR-MRG 218 (475)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHH--HHHHHHHHTCEEEEECCBT----TB-CCH
T ss_pred CchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHH--HHHHHHHcCCceEEEECCC----CC-cCH
Confidence 789999887665541 123455555555655 334455567 888887742 33 788
Q ss_pred cccc--cCCC------ccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcc--------ccccccEEEe
Q 043610 201 DALE--QNPD------AKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV--------DVTRFGVIYA 261 (430)
Q Consensus 201 ~~l~--i~~~------~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i--------dl~~~d~~~~ 261 (430)
++|+ +.++ +.+|++++++|++|.+.| +|+++ +++|+++++|++++.+.... .+...|++++
T Consensus 219 ~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~ 298 (475)
T 3k40_A 219 AALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNF 298 (475)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEE
T ss_pred HHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEE
Confidence 8887 5433 678999999999999998 78886 78999999999998764321 1223489999
Q ss_pred CCCcccc-CCccEEEEEcHHH-HhccCCCCCccccccch---hh--cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHH
Q 043610 262 GAQKNVG-PSGVTIVIVRKDL-LGNAQDKTPLMLDYKIH---DE--NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEK 334 (430)
Q Consensus 262 s~~K~~g-p~G~g~l~v~~~~-~~~~~~~~p~~~~~~~~---~~--~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~ 334 (430)
++|||++ |.|+|+++++++. +.......+.|+..... .. .....++.+ +....+..+|+.+.. .|++++.+
T Consensus 299 ~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~~l~l~~al~~~g~-~g~~~~~~ 376 (475)
T 3k40_A 299 NPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRR-FRALKLWFVLRLYGV-ENLQAHIR 376 (475)
T ss_dssp CHHHHSSCCSSCEEEEESSGGGC---------------------------CCCGG-GTHHHHHHHHHHHHH-HHHHHHHH
T ss_pred CchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCc-ccHHHHHHHHHHHhH-HHHHHHHH
Confidence 9999995 9999999998653 22211112223311100 00 001112222 234556667776653 48999999
Q ss_pred HHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCch-hHHHHHHHHHcCCeecCCCC--CCCeeEEeecCC-C
Q 043610 335 MNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDL-EAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNA-M 410 (430)
Q Consensus 335 ~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~-~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~-~ 410 (430)
+..++++++++.|++..|++++. ++ .. .+++|.+++... ..++.++|.++|++...+.. ....+|+++.++ +
T Consensus 377 ~~~~~a~~l~~~L~~~~g~~l~~-~~--~~-~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t 452 (475)
T 3k40_A 377 RHCNFAKQFGDLCVADSRFELAA-EI--NM-GLVCFRLKGSNERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFT 452 (475)
T ss_dssp HHHHHHHHHHHHHHHSTTEEESS-CC--BT-TEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHHhcCCCEEEec-CC--ce-EEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCC
Confidence 99999999999999867999874 22 23 578899864322 23788899888775432111 124799998765 5
Q ss_pred CHHHHHHHHHHHHHHHHh
Q 043610 411 PLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 411 t~edv~~ll~~L~~~~~~ 428 (430)
+++||+++++.|++++++
T Consensus 453 t~~di~~~~~~i~~~~~~ 470 (475)
T 3k40_A 453 QSEDMEYSWKEVSAAADE 470 (475)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 899999999999998764
No 96
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.92 E-value=1.7e-24 Score=217.72 Aligned_cols=328 Identities=14% Similarity=0.110 Sum_probs=223.3
Q ss_pred CceeecCC------CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC------------CC
Q 043610 70 RVFNFAAG------PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN------------IP 131 (430)
Q Consensus 70 ~~~l~~~g------p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g------------~~ 131 (430)
.+++|+.| ..++++.|++++.+.+.+.. .+.+++. ....++|+.++++++ ++
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~--~~~~~lr~~la~~~~~~~~~~~~~~~~~~ 103 (416)
T 1bw0_A 34 PIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQE--------CNGYFPT--VGSPEAREAVATWWRNSFVHKEELKSTIV 103 (416)
T ss_dssp CCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTC--------SSSCCCT--TCCHHHHHHHHHHHHHHHCCSTTTGGGCC
T ss_pred CeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCc--------cCCcCCC--CCCHHHHHHHHHHHHhhhcccccCCCCCC
Confidence 45566554 25778999999998875421 1111110 112356677777776 55
Q ss_pred CCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCC
Q 043610 132 QEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPD 208 (430)
Q Consensus 132 ~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~ 208 (430)
++ +|+++ +|++++++.++..++++||+|++..+++.+.. ..++..| +++.++...+ .+..+|+++++ ++++
T Consensus 104 ~~-~v~~~-~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~ 177 (416)
T 1bw0_A 104 KD-NVVLC-SGGSHGILMAITAICDAGDYALVPQPGFPHYE--TVCKAYGIGMHFYNCRPE--NDWEADLDEIRRLKDDK 177 (416)
T ss_dssp GG-GEEEE-SHHHHHHHHHHHHHCCTTCEEEEEESCCTHHH--HHHHHTTCEEEEEEEEGG--GTTEECHHHHHHHCCTT
T ss_pred cc-eEEEe-CChHHHHHHHHHHhCCCCCEEEEcCCCcHhHH--HHHHHcCcEEEEeecCcc--cCCCCCHHHHHHHhccC
Confidence 54 67765 79999999999999999999999888877643 4566677 7777776431 12246888887 7788
Q ss_pred ccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcC----CC----Cccccccc-----cEEEeCCCccccC
Q 043610 209 AKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNF----CS----KPVDVTRF-----GVIYAGAQKNVGP 269 (430)
Q Consensus 209 ~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~----G~----~~idl~~~-----d~~~~s~~K~~gp 269 (430)
+++|++++++|+||.++| + |.++ +++|+++++|++++. |. ...++..+ .+++.|++|+++.
T Consensus 178 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 257 (416)
T 1bw0_A 178 TKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVV 257 (416)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSC
T ss_pred CeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCC
Confidence 999999999999999999 3 4443 578999999999875 22 12233222 2678899999987
Q ss_pred Cc--cEEEEEcHH--HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 043610 270 SG--VTIVIVRKD--LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYN 345 (430)
Q Consensus 270 ~G--~g~l~v~~~--~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~ 345 (430)
+| +|+++++++ +++.+.. ....+ ....+++|...++++..+|+... ..+++...++++++++++++
T Consensus 258 ~Glr~G~~~~~~~~~~~~~~~~---~~~~~------~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~ 327 (416)
T 1bw0_A 258 PGWRLGWLLYVDPHGNGPSFLE---GLKRV------GMLVCGPCTVVQAALGEALLNTP-QEHLDQIVAKIEESAMYLYN 327 (416)
T ss_dssp GGGCCEEEEEECTTCSCHHHHH---HHHHH------HHHHTCSCHHHHHHHHHHHHSSC-HHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEeeCchhhHHHHHH---HHHHH------hccccCCCcHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHH
Confidence 78 899998764 3332110 00000 00124678888888888887422 23578889999999999999
Q ss_pred HHHccCCceecCCCCCCCccceEEEEcCCC-----chhHHHHHHH-HHcCCeecCCCC--CCCeeEEeecCCCCHHHHHH
Q 043610 346 VIDGSNGFYKCPVEKSVRSFMNVPFTLEKS-----DLEAEFVKEA-AKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEK 417 (430)
Q Consensus 346 ~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~-----~~~~~~~~~L-~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ 417 (430)
.|.+..|+.+.. + ..+ ..+.+.++.. ....++.+.| .++||.+.+|.. ..+++|||++ ++++++++
T Consensus 328 ~L~~~~g~~~~~--~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~--~~~e~l~~ 401 (416)
T 1bw0_A 328 HIGECIGLAPTM--P-RGA-MYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTT--RPVEVYRE 401 (416)
T ss_dssp HHTTSTTEEECC--C-CBT-TEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC--SCHHHHHH
T ss_pred HHHhCCCCcccC--C-Cee-EEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEec--CCHHHHHH
Confidence 998745877652 2 122 2344566421 1133688887 578999877642 2468999995 58999999
Q ss_pred HHHHHHHHHHhh
Q 043610 418 LVAFMKDFQAKH 429 (430)
Q Consensus 418 ll~~L~~~~~~~ 429 (430)
+++.|+++++++
T Consensus 402 ~l~~l~~~l~~~ 413 (416)
T 1bw0_A 402 AVERIKAFCQRH 413 (416)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999988764
No 97
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.92 E-value=3.1e-24 Score=215.18 Aligned_cols=324 Identities=11% Similarity=0.033 Sum_probs=218.2
Q ss_pred CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610 69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA 148 (430)
Q Consensus 69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~ 148 (430)
..+++++.|..+.++.|++++.+.+.+ + .+ ..+ ....++++.+++++|.+ +++++ +|||+++.
T Consensus 30 ~~~id~~~~~~~~~~~v~~a~~~~~~~----~--~y---~~~----~~~~~l~~~la~~~~~~---~~v~~-~~Gt~a~~ 92 (399)
T 2oga_A 30 VPFLDLKAAYEELRAETDAAIARVLDS----G--RY---LLG----PELEGFEAEFAAYCETD---HAVGV-NSGMDALQ 92 (399)
T ss_dssp BCSCCHHHHHHHTHHHHHHHHHHHHHH----T--CC---SSS----HHHHHHHHHHHHHTTSS---EEEEE-SCHHHHHH
T ss_pred CcccccCcCCCCCCHHHHHHHHHHHhc----C--CC---CCc----hhHHHHHHHHHHHHCCC---eEEEe-cCHHHHHH
Confidence 346778777766779999999988753 0 01 111 34568899999999986 45665 67899999
Q ss_pred HHHhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcccc
Q 043610 149 AVPLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVE 224 (430)
Q Consensus 149 ~~~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~ 224 (430)
.++.++ +++||+|++...++.+. ...++..| +++.++..++ +..+|+++++ +++++++|++ +|+||.+
T Consensus 93 ~~l~~~~~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~~~~~~~---~~~~d~~~l~~~i~~~~~~v~~---~n~tG~~ 164 (399)
T 2oga_A 93 LALRGLGIGPGDEVIVPSHTYIAS--WLAVSATGATPVPVEPHED---HPTLDPLLVEKAITPRTRALLP---VHLYGHP 164 (399)
T ss_dssp HHHHHTTCCTTCEEEEESSSCTHH--HHHHHHTTCEEEEECBCSS---SSSBCHHHHHHHCCTTEEEECC---BCGGGCC
T ss_pred HHHHHhCCCCcCEEEECCCccHHH--HHHHHHCCCEEEEEecCCC---CCCcCHHHHHHhcCCCCeEEEE---eCCcCCc
Confidence 999998 88999999887776663 23456678 7777776431 2247888887 7778887774 5789999
Q ss_pred CC--CCccc-cCCCcEEEEeccCcCCCCccc---ccc-ccEEEeCC--CccccCCc-cEEEEEc-HHHHhccCCCCC--c
Q 043610 225 FK--EYPSA-KNSTGILVADMSSNFCSKPVD---VTR-FGVIYAGA--QKNVGPSG-VTIVIVR-KDLLGNAQDKTP--L 291 (430)
Q Consensus 225 ~p--ei~~~-~~~g~~lvvD~a~s~G~~~id---l~~-~d~~~~s~--~K~~gp~G-~g~l~v~-~~~~~~~~~~~p--~ 291 (430)
.| +|.++ +++|+++++|++|++|... + +.. .|++++|+ +|++|++| .|+++.+ +++++.+.+... .
T Consensus 165 ~~l~~i~~l~~~~~~~li~Dea~~~g~~~-~~~~~~~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~~g~ 243 (399)
T 2oga_A 165 ADMDALRELADRHGLHIVEDAAQAHGARY-RGRRIGAGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRNYGS 243 (399)
T ss_dssp CCHHHHHHHHHHHTCEECEECTTCTTCEE-TTEETTCTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHBTTC
T ss_pred cCHHHHHHHHHHcCCEEEEECcccccCcc-CCeecccccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHhcCc
Confidence 98 78886 6889999999999988642 2 222 27888998 59998765 5777775 777665422100 0
Q ss_pred cccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEE
Q 043610 292 MLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFT 371 (430)
Q Consensus 292 ~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~ 371 (430)
...|.. .......+++....+++..+++. ++.+.++.+++++++++.|.+..|+++.. .++......+.|.
T Consensus 244 ~~~~~~--~~~g~~~~~~~~~~a~~~~~l~~------~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~~~~~~~~~~~ 314 (399)
T 2oga_A 244 RQKYSH--ETKGTNSRLDEMQAAVLRIRLAH------LDSWNGRRSALAAEYLSGLAGLPGIGLPV-TAPDTDPVWHLFT 314 (399)
T ss_dssp SSTTCC--CSCCCBCCCCHHHHHHHHHHHHT------HHHHHHHHHHHHHHHHHHTTTCTTCBCCC-CCTTEECCCSSEE
T ss_pred cccccc--cccccCCCcCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHhccCCCccccC-CCCCCcceeEEEE
Confidence 000100 00001124455555555556653 34567788888999999998755776532 2222222111233
Q ss_pred cCCCchhHHHHHHHHHcCCeecCCCCC-------------------------CCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610 372 LEKSDLEAEFVKEAAKEKMVQLKGHRS-------------------------VGGMRASIYNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 372 ~~~~~~~~~~~~~L~~~Gi~~~~g~~~-------------------------~g~iRis~~~~~t~edv~~ll~~L~~~~ 426 (430)
+.. ....++.+.|.++||.+..+... .+.|||+++.+++++|+++++++|++++
T Consensus 315 ~~~-~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 393 (399)
T 2oga_A 315 VRT-ERRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWA 393 (399)
T ss_dssp EEC-SSHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHH
T ss_pred EEC-CCHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 332 11337999999999987654310 1469999999999999999999999987
Q ss_pred Hh
Q 043610 427 AK 428 (430)
Q Consensus 427 ~~ 428 (430)
++
T Consensus 394 ~~ 395 (399)
T 2oga_A 394 ER 395 (399)
T ss_dssp HS
T ss_pred HH
Confidence 64
No 98
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.92 E-value=8.2e-24 Score=219.21 Aligned_cols=342 Identities=13% Similarity=0.034 Sum_probs=221.7
Q ss_pred CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEeCcHHHH
Q 043610 68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE-YSVLFLQGGATTQ 146 (430)
Q Consensus 68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~-~~vv~~~~gaT~a 146 (430)
.++.+.+-+++...+.-+.+++...+.. +.. .+..++...++.+++++.+++++|.+.+ ..++++ +|+|++
T Consensus 95 ~p~f~~~~~~~~~~~~~~~e~l~~~~~~----~~~---~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t-~ggt~a 166 (511)
T 3vp6_A 95 HPRFFNQLSTGLDIIGLAGEWLTSTANT----NMF---TYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFS-PGGAIS 166 (511)
T ss_dssp STTEESSSSCCCCHHHHHHHHHHHHHCC----CSS---CTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEE-SSHHHH
T ss_pred CCCceEeecCCCcHHHHHHHHHHHHhcc----CCC---CcccCchHHHHHHHHHHHHHHHhCCCCCCCceEEC-CchHHH
Confidence 3445555566554444444555554421 111 1123577888888999999999999832 256664 789999
Q ss_pred HHHHHhhcCC--------------CCCcEEEEeCChhHHHHHHHHHHhC----CceEEecCCCCcCCCCCCccccc--cC
Q 043610 147 FAAVPLNLCT--------------PNDPVDYIVTGSWGDKAFKEAQKFC----NPQVIWSGKAEKYTKIPNFDALE--QN 206 (430)
Q Consensus 147 ~~~~~~sl~~--------------~gd~vl~~~~g~~~~~~~~~a~~~g----~~~~v~~~~~~~~g~~~d~~~l~--i~ 206 (430)
+..++..+.. +++.|++....+++. .+.++..| +++.++... .+ .+|+++|+ +.
T Consensus 167 ~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~--~~~~~~~g~g~~~~~~v~~d~---~~-~~d~~~Le~~i~ 240 (511)
T 3vp6_A 167 NMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSI--KKAGAALGFGTDNVILIKCNE---RG-KIIPADFEAKIL 240 (511)
T ss_dssp HHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHH--HHHHHHTTSCGGGEEEECBCT---TS-CBCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHH--HHHHHHcCCCCCcEEEeecCC---CC-ccCHHHHHHHHH
Confidence 9877666532 355566555556553 33444444 345555532 23 57888887 54
Q ss_pred CC------ccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc-----ccc---ccccEEEeCCCcccc-
Q 043610 207 PD------AKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP-----VDV---TRFGVIYAGAQKNVG- 268 (430)
Q Consensus 207 ~~------~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~-----idl---~~~d~~~~s~~K~~g- 268 (430)
++ +++|++++++|++|.+.| +|+++ +++|++++||++++.|... .++ ...|++++++|||++
T Consensus 241 ~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~ 320 (511)
T 3vp6_A 241 EAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGV 320 (511)
T ss_dssp HHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCC
T ss_pred HHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCC
Confidence 43 889999999999999988 78886 6899999999999987762 223 344899999999995
Q ss_pred CCccEEEEEcHH-HHhccCCCCCccccccch-----hh--cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043610 269 PSGVTIVIVRKD-LLGNAQDKTPLMLDYKIH-----DE--NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKA 340 (430)
Q Consensus 269 p~G~g~l~v~~~-~~~~~~~~~p~~~~~~~~-----~~--~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~ 340 (430)
|.|+|+++++++ ++.......+.|+..... .. ......+.+ +...++..+++.+.. .|++++.+++.+++
T Consensus 321 p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~-~~al~~~~al~~~g~-~gl~~~~~~~~~~a 398 (511)
T 3vp6_A 321 LLQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRH-VDIFKFWLMWKAKGT-VGFENQINKCLELA 398 (511)
T ss_dssp CSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCC-CCHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred CcCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCc-hHHHHHHHHHHHHhH-HHHHHHHHHHHHHH
Confidence 999999999764 444432222323211000 00 000111211 234555666666553 48999999999999
Q ss_pred HHHHHHHHccCCceecCCCCCCCccceEEEEcCCCch----------------hHHHHHHHHHcCCeecC-C--CCCCCe
Q 043610 341 ELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDL----------------EAEFVKEAAKEKMVQLK-G--HRSVGG 401 (430)
Q Consensus 341 ~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~----------------~~~~~~~L~~~Gi~~~~-g--~~~~g~ 401 (430)
+++++.|++.+|++++...++ .. .+++|.+.+.+. ..++.++|.++|++... . ....+.
T Consensus 399 ~~l~~~L~~~pg~~l~~~~~p-~~-~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~ 476 (511)
T 3vp6_A 399 EYLYAKIKNREEFEMVFNGEP-EH-TNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANF 476 (511)
T ss_dssp HHHHHHHHSCTTEEESSSSCC-SS-SCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEE
T ss_pred HHHHHHHhcCCCEEEEecCCC-Ce-EEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEE
Confidence 999999998679998742122 23 357777543221 11477888888876432 1 111236
Q ss_pred eEEee-cCCCCHHHHHHHHHHHHHHHH
Q 043610 402 MRASI-YNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 402 iRis~-~~~~t~edv~~ll~~L~~~~~ 427 (430)
+||++ +.+++++||++++++|+++.+
T Consensus 477 lRi~~~~~~~t~~di~~ll~~i~~~~~ 503 (511)
T 3vp6_A 477 FRMVISNPAATQSDIDFLIEEIERLGQ 503 (511)
T ss_dssp EEECCCCTTCCHHHHHHHHHHHHHHHC
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 99999 568899999999999998754
No 99
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.92 E-value=1.3e-24 Score=223.09 Aligned_cols=347 Identities=14% Similarity=0.090 Sum_probs=218.1
Q ss_pred CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHH-HHHHHHHHHHhCCCCCcE-EEEEeCcHHHHH
Q 043610 70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSII-EKAESDLRALLNIPQEYS-VLFLQGGATTQF 147 (430)
Q Consensus 70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~-~~~r~~la~l~g~~~~~~-vv~~~~gaT~a~ 147 (430)
+.+++.++|.++++.|+++|...+.+..+.|... .....+.++.+.+ +.+++.+++++|++.++- +.+.++|||+|+
T Consensus 55 ~~i~lias~n~~~~~V~eA~~~~l~~~y~~G~~g-~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An 133 (490)
T 2a7v_A 55 RGLELIASENFCSRAALEALGSCLNNKYSEGYPG-KRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPAN 133 (490)
T ss_dssp HSEECCTTCCCCCHHHHHHHTSGGGTCCCCC-------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHH
T ss_pred cCceEECCCCCCCHHHHHHHHHHHcCCCccCCCc-ccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHH
Confidence 6788889999999999999999887655434311 1122233443333 478899999999986311 344456899999
Q ss_pred HHHHhhcCCCCCcEEEEeCChhH---HHHHH---HHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEeec
Q 043610 148 AAVPLNLCTPNDPVDYIVTGSWG---DKAFK---EAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHICAN 217 (430)
Q Consensus 148 ~~~~~sl~~~gd~vl~~~~g~~~---~~~~~---~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~~~ 217 (430)
.+++.++++|||+|++....+.+ +.+.. .....| ....++..-+.+.+ .+|+++++ +. +++++|+++.+
T Consensus 134 ~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~-~iD~d~le~~l~~~~~klIi~~~s 212 (490)
T 2a7v_A 134 LAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTG-LIDYNQLALTARLFRPRLIIAGTS 212 (490)
T ss_dssp HHHHHHHCCSCEECCC-------------------------------CCBCTTTC-SBCHHHHHHHHHHHCCSEEEECCS
T ss_pred HHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccC-CcCHHHHHHHHhhcCCcEEEEcCC
Confidence 99999999999999976644322 22211 111224 33333332111123 68999887 43 47888887765
Q ss_pred CCCccccCC--CCccc-cCCCcEEEEeccCcCCC-----CccccccccEEEeCCCccc-cCCccEEEEEcHHHHhccCCC
Q 043610 218 ETIHGVEFK--EYPSA-KNSTGILVADMSSNFCS-----KPVDVTRFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDK 288 (430)
Q Consensus 218 ~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~-----~~idl~~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~ 288 (430)
.+ |+..| +|.++ +++|+++++|++|.+|. .+..+...|++++|+||++ ||.| |+++++++++.. .+.
T Consensus 213 ~~--~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~aDiv~~S~hK~l~Gp~G-G~i~~~~~~~~~-~~~ 288 (490)
T 2a7v_A 213 AY--ARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARS-GLIFYRKGVKAV-DPK 288 (490)
T ss_dssp SC--CSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCSCSC-EEEEEECSEEEE-ETT
T ss_pred CC--CCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCCCCEEEECCcccCccccc-hheeeccchhcc-ccc
Confidence 55 56677 78886 68999999999987543 2334445689999999999 6998 999988753210 000
Q ss_pred --CCccccccchhh---cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCC
Q 043610 289 --TPLMLDYKIHDE---NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVR 363 (430)
Q Consensus 289 --~p~~~~~~~~~~---~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~r 363 (430)
.+.+.++....+ .....++|+...+.++..|++.... .++++..++..++++++++.|.+ .|+.+.. .. ..
T Consensus 289 ~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~-~~~~~~~~~~~~na~~L~~~L~~-~G~~v~~-~~-t~ 364 (490)
T 2a7v_A 289 TGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACT-PMFREYSLQVLKNARAMADALLE-RGYSLVS-GG-TD 364 (490)
T ss_dssp TEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHH-TTCEEGG-GS-CS
T ss_pred ccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHH-cCcEEec-CC-CC
Confidence 000111111111 1112367888888888888887652 24578889999999999999997 7998863 11 12
Q ss_pred ccceEEEEcCCCchhH-HHHHHHHHcCCeecC----CCC---CCCeeEEeecC----CCCHHHHHHHHHHHHHHHH
Q 043610 364 SFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLK----GHR---SVGGMRASIYN----AMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 364 s~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~----g~~---~~g~iRis~~~----~~t~edv~~ll~~L~~~~~ 427 (430)
+ +++.+.+.+.+.+. ++.+.|.+.||.+.. +.+ ..++|||+... ..+++|+++++++|.+++.
T Consensus 365 t-~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~ 439 (490)
T 2a7v_A 365 N-HLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp S-SEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred C-eEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHH
Confidence 2 45667776444444 677888889999753 322 13579998633 4589999999999998775
No 100
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.92 E-value=1.1e-23 Score=208.70 Aligned_cols=285 Identities=13% Similarity=0.098 Sum_probs=206.2
Q ss_pred HHHHHHHHHh-CCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCC
Q 043610 119 KAESDLRALL-NIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTK 196 (430)
Q Consensus 119 ~~r~~la~l~-g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~ 196 (430)
++|+.+++++ +.+++ +++++ +|+++|+..++.+++++||+|++..+++.+.. ..++..| +++.++...+ .+.
T Consensus 67 ~l~~~la~~~~~~~~~-~v~~~-~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~~--~~~ 140 (375)
T 3op7_A 67 AFKKSVSQLYTGVKPE-QILQT-NGATGANLLVLYSLIEPGDHVISLYPTYQQLY--DIPKSLGAEVDLWQIEEE--NGW 140 (375)
T ss_dssp HHHHHHHTTSSSCCGG-GEEEE-SHHHHHHHHHHHHHCCTTCEEEEEESSCTHHH--HHHHHTTCEEEEEEEEGG--GTT
T ss_pred HHHHHHHHHhccCChh-hEEEc-CChHHHHHHHHHHhcCCCCEEEEeCCCchhHH--HHHHHcCCEEEEEecccc--CCC
Confidence 6778888887 45555 67765 89999999999999999999998888877643 4466677 7777776432 233
Q ss_pred CCCccccc--cCCCccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCCc-----cccccccEEEeCC
Q 043610 197 IPNFDALE--QNPDAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSKP-----VDVTRFGVIYAGA 263 (430)
Q Consensus 197 ~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~~-----idl~~~d~~~~s~ 263 (430)
.+|+++++ +++++++|++++++|+||.+.| + |.++ +++|+++++|++|+.+... .+..+.++++.|+
T Consensus 141 ~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~ 220 (375)
T 3op7_A 141 LPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSL 220 (375)
T ss_dssp EECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEEEES
T ss_pred CCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhhcCCEEEEeEC
Confidence 46888887 7889999999999999999999 3 4444 5899999999998754332 1222224889999
Q ss_pred CccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610 264 QKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE 341 (430)
Q Consensus 264 ~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~ 341 (430)
+|++|++| +|++++++++++.+..... ....+++...++++..+++...+ .++..+++++++++
T Consensus 221 sK~~~~~G~r~G~v~~~~~l~~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~ 286 (375)
T 3op7_A 221 SKTYSLPGIRIGWVAANHQVTDILRDYRD------------YTMICAGVFDDLVAQLALAHYQE--ILERNRHILEENLA 286 (375)
T ss_dssp SSSSSCGGGCCEEEECCHHHHHHHTTTGG------------GTTSCCCHHHHHHHHHHHHTHHH--HHHHHHHHHHHHHH
T ss_pred hhhcCCcccceEEEEeCHHHHHHHHHHHh------------hhccCCCcHHHHHHHHHHhccHH--HHHHHHHHHHHHHH
Confidence 99999777 6999999998887643111 11135566777777777775432 46778888899999
Q ss_pred HHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHH
Q 043610 342 LLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKL 418 (430)
Q Consensus 342 ~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~l 418 (430)
.+.+.|.+..++.... +. .+ ..+.+.++......++.++| +++||.+.+|.. ..+++||+++. +.++++++
T Consensus 287 ~l~~~l~~~~~~~~~~--~~-~~-~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~i~~~ 360 (375)
T 3op7_A 287 ILDQWIEEEPLVSYIR--PA-VV-STSFVKIAVDMPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFAC--EQETLIKG 360 (375)
T ss_dssp HHHHHHHHCTTEEECC--CS-SS-SCEEEEECCSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCS--CHHHHHHH
T ss_pred HHHHHHhhCCCceEec--CC-Ce-EEEeEEcCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecC--CHHHHHHH
Confidence 9999998755776543 11 12 22334454322233788877 678999877542 24689999875 55999999
Q ss_pred HHHHHHHHHhh
Q 043610 419 VAFMKDFQAKH 429 (430)
Q Consensus 419 l~~L~~~~~~~ 429 (430)
++.|++++++.
T Consensus 361 l~~l~~~l~~~ 371 (375)
T 3op7_A 361 LEKLSQFLRRF 371 (375)
T ss_dssp HHHHHHHHGGG
T ss_pred HHHHHHHHHHH
Confidence 99999988754
No 101
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.92 E-value=2.7e-24 Score=215.27 Aligned_cols=310 Identities=12% Similarity=0.052 Sum_probs=212.9
Q ss_pred CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC--CCC
Q 043610 81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC--TPN 158 (430)
Q Consensus 81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~--~~g 158 (430)
.++.|++++.+.+.++..... .+ ...+ ......+++|+.+++++|.++ ++++ ++ |++++..++..+. .+|
T Consensus 61 ~~p~v~~a~~~~~~~~~~~~~-~~-~~~~--~~~~~~~~l~~~la~~~~~~~--~i~~-~s-G~~a~~~~~~~l~~~~~g 132 (401)
T 2bwn_A 61 QHPVVLAAMHEALEAVGAGSG-GT-RNIS--GTTAYHRRLEAEIAGLHQKEA--ALVF-SS-AYNANDATLSTLRVLFPG 132 (401)
T ss_dssp GCHHHHHHHHHHHHHHCSCCC-SB-TTTB--CCBHHHHHHHHHHHHHTTCSE--EEEE-SC-HHHHHHHHHHHHHHHSTT
T ss_pred CCHHHHHHHHHHHHHcCCCCC-Cc-Cccc--CChHHHHHHHHHHHHHhCCCc--EEEE-CC-cHHHHHHHHHHHhcCCCC
Confidence 466899999998876432111 00 0011 112456689999999999852 5554 45 4557776655543 589
Q ss_pred CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c---C-CCccEEEEeecCCCccccCC--CCc
Q 043610 159 DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q---N-PDAKYLHICANETIHGVEFK--EYP 229 (430)
Q Consensus 159 d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i---~-~~~~lv~i~~~~t~tG~~~p--ei~ 229 (430)
|+|++....|.+.. ..++..| +++.++.. |+++++ + . +++++|++++++|+||.+.| +|.
T Consensus 133 d~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~---------d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~ 201 (401)
T 2bwn_A 133 LIIYSDSLNHASMI--EGIKRNAGPKRIFRHN---------DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEIC 201 (401)
T ss_dssp CEEEEETTCCHHHH--HHHHHSCCCEEEECTT---------CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHH
T ss_pred CEEEECchhhHHHH--HHHHHcCCeEEEEcCC---------CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHH
Confidence 98887665555432 2345567 76666541 344554 3 2 58999999999999999999 788
Q ss_pred cc-cCCCcEEEEeccCcCCCC-c--------ccc-ccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccch
Q 043610 230 SA-KNSTGILVADMSSNFCSK-P--------VDV-TRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIH 298 (430)
Q Consensus 230 ~~-~~~g~~lvvD~a~s~G~~-~--------idl-~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~ 298 (430)
++ +++|+++++|++|+.|.. + .++ +..++++.|++|++|.+| |+++.++++++.+...... +
T Consensus 202 ~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G-G~~~~~~~~~~~l~~~~~~---~--- 274 (401)
T 2bwn_A 202 DIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG-GYIAASARMVDAVRSYAPG---F--- 274 (401)
T ss_dssp HHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC-EEEEECHHHHHHHHHHCHH---H---
T ss_pred HHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC-CEEecCHHHHHHHHHhCcC---c---
Confidence 86 688999999999995532 1 122 134788999999999778 9999998877653210000 0
Q ss_pred hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchh
Q 043610 299 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLE 378 (430)
Q Consensus 299 ~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~ 378 (430)
. ...++++ ..++++..+++++. ..|++.+.++++++++++++.|.+. |+++.+ + +++ ++.|.+++ +.+
T Consensus 275 --~-~~~~~~~-~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~--~~~-~~~~~~~~-~~~ 342 (401)
T 2bwn_A 275 --I-FSTSLPP-AIAAGAQASIAFLK-TAEGQKLRDAQQMHAKVLKMRLKAL-GMPIID--H--GSH-IVPVVIGD-PVH 342 (401)
T ss_dssp --H-TSBCCCH-HHHHHHHHHHHHHT-SHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCC--C--SSS-CEEEECCC-HHH
T ss_pred --e-ecCCCCH-HHHHHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHHHHC-CCcccC--C--CCC-eEEEEeCC-hHH
Confidence 0 1124555 67888888998775 3357899999999999999999974 877653 2 243 57788764 233
Q ss_pred H-HHHHHHH-HcCCeecCCCC---C--CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 379 A-EFVKEAA-KEKMVQLKGHR---S--VGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 379 ~-~~~~~L~-~~Gi~~~~g~~---~--~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
. ++.+.|. ++||.+.++.. . .+.+|||++.+++++|+++++++|++++++
T Consensus 343 ~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 343 TKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp HHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence 3 6888885 78999865431 1 247999999999999999999999998764
No 102
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.92 E-value=1e-23 Score=211.38 Aligned_cols=322 Identities=14% Similarity=0.129 Sum_probs=218.2
Q ss_pred CceeecCCCC----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh----CC--CCCcEEEEE
Q 043610 70 RVFNFAAGPA----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL----NI--PQEYSVLFL 139 (430)
Q Consensus 70 ~~~l~~~gp~----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~----g~--~~~~~vv~~ 139 (430)
.+++|+.|-. ..++.+++++.+.+.+.. .. .. ++.. ....++|+.+++++ |. +++ +|+++
T Consensus 35 ~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~---~~---~~-y~~~--~~~~~l~~~la~~~~~~~g~~~~~~-~v~~t 104 (407)
T 2zc0_A 35 KLISLAAGDPDPELIPRAVLGEIAKEVLEKEP---KS---VM-YTPA--NGIPELREELAAFLKKYDHLEVSPE-NIVIT 104 (407)
T ss_dssp CCEECCSCCCCTTTSCHHHHHHHHHHHHHHCG---GG---GS-CCCT--TCCHHHHHHHHHHHHHHSCCCCCGG-GEEEE
T ss_pred ceEeCCCCCCCchhCCHHHHHHHHHHHHhhcc---cc---cc-CCCC--CCCHHHHHHHHHHHHHhcCCCCCcc-eEEEe
Confidence 5677766532 256789999988876421 00 11 1110 01234555555555 84 444 67664
Q ss_pred eCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC----C--Ccc
Q 043610 140 QGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN----P--DAK 210 (430)
Q Consensus 140 ~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~----~--~~~ 210 (430)
+|+|++++.++..++++||+|++..+++.+. ...++..| +++.++..+ .+ +|+++++ ++ + +++
T Consensus 105 -~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~--~~~~~~~g~~~~~v~~~~---~~--~d~~~l~~~l~~~~~~~~~~~ 176 (407)
T 2zc0_A 105 -IGGTGALDLLGRVLIDPGDVVITENPSYINT--LLAFEQLGAKIEGVPVDN---DG--MRVDLLEEKIKELKAKGQKVK 176 (407)
T ss_dssp -SHHHHHHHHHHHHHCCTTCEEEEEESCCHHH--HHHHHTTTCEEEEEEEET---TE--ECHHHHHHHHHHHHHTTCCEE
T ss_pred -cCHHHHHHHHHHHhcCCCCEEEEeCCChHHH--HHHHHHcCCEEEEcccCC---CC--CCHHHHHHHHHhhhcccCCce
Confidence 7899999999999989999999888877664 34455667 777777632 22 6788886 55 5 788
Q ss_pred EE-EEeecCCCccccCC-----CCccc-cCCCcEEEEeccCcCCCC----ccccccc-----cEEEeCCCccccCCc--c
Q 043610 211 YL-HICANETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCSK----PVDVTRF-----GVIYAGAQKNVGPSG--V 272 (430)
Q Consensus 211 lv-~i~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~----~idl~~~-----d~~~~s~~K~~gp~G--~ 272 (430)
+| ++++++|+||.++| +|.++ +++|+++++|++|+.+.. ..++..+ .+++.|++|++| +| +
T Consensus 177 ~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~ 255 (407)
T 2zc0_A 177 LIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRI 255 (407)
T ss_dssp EEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-TTSCC
T ss_pred EEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccC-CCcce
Confidence 87 57888999999999 34444 588999999999886532 1223322 268889999999 67 8
Q ss_pred EEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHcc-
Q 043610 273 TIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLEL-GGLNEVEKMNRKKAELLYNVIDGS- 350 (430)
Q Consensus 273 g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~-~g~~~v~~~~~~l~~~l~~~l~~~- 350 (430)
|++++++++++.+.... . ....+.+...+.++..+++..... ..++.+.++++++++++.+.|.+.
T Consensus 256 G~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 323 (407)
T 2zc0_A 256 GWIIAEGEILKKVLMQK-----------Q-PIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHL 323 (407)
T ss_dssp EEEECCHHHHHHHHHHH-----------T-TTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEecCHHHHHHHHHHH-----------H-hhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999988877642200 0 011234666677777777643111 357788899999999999999863
Q ss_pred CCceecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHc-CCeecCCCC------CCCeeEEeecCCCCHHHHHHHHHHH
Q 043610 351 NGFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKE-KMVQLKGHR------SVGGMRASIYNAMPLAGVEKLVAFM 422 (430)
Q Consensus 351 ~G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~-Gi~~~~g~~------~~g~iRis~~~~~t~edv~~ll~~L 422 (430)
.|+.+.. + .....+.+.+++ +.+. ++.+.|.++ ||.+.+|.. ..+++|||++.. +++|++++++.|
T Consensus 324 ~~~~~~~--~--~~~~~~~~~~~~-~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l 397 (407)
T 2zc0_A 324 PNAEFTK--P--IAGMFVMFFLPE-GADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRP-SKEEIPIGIKKL 397 (407)
T ss_dssp TTSCBCC--C--SBSSEEEEECST-TCCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSS-CTTHHHHHHHHH
T ss_pred CCCEEec--C--CCcEEEEEEcCC-CCCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCC-CHHHHHHHHHHH
Confidence 4665432 2 122356677764 2333 799999887 999877642 235799999876 899999999999
Q ss_pred HHHHHh
Q 043610 423 KDFQAK 428 (430)
Q Consensus 423 ~~~~~~ 428 (430)
++++++
T Consensus 398 ~~~l~~ 403 (407)
T 2zc0_A 398 AKLYKE 403 (407)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998764
No 103
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.92 E-value=4.9e-24 Score=214.19 Aligned_cols=307 Identities=11% Similarity=-0.005 Sum_probs=214.9
Q ss_pred CcHHHHHHHHHHhhhcc-CCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCC
Q 043610 81 LPEKVLLKAQSELYNWR-GSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPND 159 (430)
Q Consensus 81 ~~~~V~~a~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd 159 (430)
.++.+++++.+.+.++. +.+.+.+..+ ..+..+++++.+++++|.+. .+++ ++|++++..++..++++||
T Consensus 74 ~~p~v~~a~~~~l~~~~~~~~~~~~~~g-----~~~~~~~l~~~la~~~g~~~---~i~~-~sGt~a~~~~l~~~~~~gd 144 (409)
T 3kki_A 74 NHPLIKARLAKSLLEEQQSLFMSASFLQ-----NDYDKPMIEKRLAKFTGFDE---CLLS-QSGWNANVGLLQTICQPNT 144 (409)
T ss_dssp TCHHHHHHHHHHHHSCCCCCCSBGGGGC-----STTTSCHHHHHHHHHHTCSE---EEEE-SCHHHHHHHHHHHHCCTTC
T ss_pred CCHHHHHHHHHHHHHcCCCCCccccccC-----CcHHHHHHHHHHHHHhCCCe---EEEe-cchHHHHHHHHHHhcCCCC
Confidence 47899999999887642 1111111111 11234578899999999863 4555 4678999999999999999
Q ss_pred cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEeecCCCccccCC--CCccc-c
Q 043610 160 PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHICANETIHGVEFK--EYPSA-K 232 (430)
Q Consensus 160 ~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~~~~t~tG~~~p--ei~~~-~ 232 (430)
.|++....+.+.. ...+..| +++.++ ..|+++++ +. .++++|++++++|+||.+.| +|.++ +
T Consensus 145 ~Vl~~~~~~~~~~--~~~~~~g~~~~~~~---------~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~ 213 (409)
T 3kki_A 145 NVYIDFFAHMSLW--EGARYANAQAHPFM---------HNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISK 213 (409)
T ss_dssp EEEEETTSCHHHH--HHHHHTTCEEEEEC---------TTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHH
T ss_pred EEEECCCcCHHHH--HHHHHcCCeEEEec---------CCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHH
Confidence 9987655554432 2333445 443332 25677776 44 35899999999999999999 78886 6
Q ss_pred CCCcEEEEeccCcCCCCc---------cccc-cccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcC
Q 043610 233 NSTGILVADMSSNFCSKP---------VDVT-RFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENN 302 (430)
Q Consensus 233 ~~g~~lvvD~a~s~G~~~---------idl~-~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~ 302 (430)
++|+++++|++|+.|... .++. +.|+++.|++|++|+.| |+++.++++++.+...... +.
T Consensus 214 ~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g-g~v~~~~~~~~~~~~~~~~-~~-------- 283 (409)
T 3kki_A 214 EFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA-GAIWCNNEVNRCVPFISYP-AI-------- 283 (409)
T ss_dssp HHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC-EEEEESSSGGGTHHHHCHH-HH--------
T ss_pred HcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc-eEEEECHHHHHHHHHhCcC-cc--------
Confidence 899999999999875431 2232 34799999999998766 9999998876653211000 00
Q ss_pred CCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHH
Q 043610 303 SLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFV 382 (430)
Q Consensus 303 ~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~ 382 (430)
..++.+...+.++.++++.+.+ . ++++++++++++++++.|.+ .|+++.. .+ ..+.+.+++.....++.
T Consensus 284 -~~~~~~~~~~aa~~aal~~~~~-~--~~~~~~~~~~~~~l~~~L~~-~g~~~~~-----~~-~~~~~~~~~~~~~~~~~ 352 (409)
T 3kki_A 284 -FSSTLLPYEAAGLETTLEIIES-A--DNRRQHLDRMARKLRIGLSQ-LGLTIRS-----ES-QIIGLETGDERNTEKVR 352 (409)
T ss_dssp -HSBCCCHHHHHHHHHHHHHHHH-C--HHHHHHHHHHHHHHHHHHHT-TTCCCCC-----SS-SEEEEEEESHHHHHHHH
T ss_pred -ccCCCcHHHHHHHHHHHHHHhc-C--HHHHHHHHHHHHHHHHHHHH-cCCccCC-----CC-CEEEEEeCCHHHHHHHH
Confidence 1124566777888888987753 2 68899999999999999997 5776541 23 35666766422223688
Q ss_pred HHHHHcCCeecCCC-----CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 383 KEAAKEKMVQLKGH-----RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 383 ~~L~~~Gi~~~~g~-----~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
+.|.++||.+.+.. ...+++||++..+++++|+++++++|++++++
T Consensus 353 ~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 353 DYLESNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp HHHHHTTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence 99999999874321 12357999999999999999999999998875
No 104
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.92 E-value=8.5e-24 Score=215.01 Aligned_cols=331 Identities=13% Similarity=0.127 Sum_probs=222.1
Q ss_pred CCCceeecCCC--CCCcHHHHHHHHHHhhhccC-CCCcccccCCCcHHHHHHHHHHHHHHHHHh----CCCCCcEEEEEe
Q 043610 68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRG-SGMSVMEMSHRGKEFKSIIEKAESDLRALL----NIPQEYSVLFLQ 140 (430)
Q Consensus 68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~r~~la~l~----g~~~~~~vv~~~ 140 (430)
.+++++|+.|- .+.++.|++++.+.+.+... .+. +.+.+. ....++|+.+++++ +++++ +|+++
T Consensus 68 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~-----~~y~~~--~g~~~lr~~ia~~~~~g~~~~~~-~i~~t- 138 (449)
T 3qgu_A 68 DAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGY-----SGYGAE--QGQGALREAVASTFYGHAGRAAD-EIFIS- 138 (449)
T ss_dssp TCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCC-----CCSTTT--TCCHHHHHHHHHHHHTTTTCCGG-GEEEE-
T ss_pred CCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCC-----CCCCCC--CCcHHHHHHHHHHHHcCCCCCHH-HEEEc-
Confidence 45677777764 45789999999998875321 111 112111 12346777888877 66655 77775
Q ss_pred CcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-C----------ceEEecCCCCcCCCCCCccccccCCCc
Q 043610 141 GGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-N----------PQVIWSGKAEKYTKIPNFDALEQNPDA 209 (430)
Q Consensus 141 ~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~----------~~~v~~~~~~~~g~~~d~~~l~i~~~~ 209 (430)
+|+++++..+ ..++++||+|++..+.+.++. ..++..| + +..++...+ .+..+++++ . +++
T Consensus 139 ~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~--~~~~~~g~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~-~~~ 210 (449)
T 3qgu_A 139 DGSKCDIARI-QMMFGSKPTVAVQDPSYPVYV--DTSVMMGMTGDHNGTGFDGIEYMVCNPD--NHFFPDLSK--A-KRT 210 (449)
T ss_dssp SCHHHHHHHH-HHHHCSSSCEEEEESCCTHHH--HHHHHHTCSCCBCSSSBTTEEEEECCGG--GTTCCCGGG--C-CCC
T ss_pred cCHHHHHHHH-HHHhCCCCEEEEcCCCChhHH--HHHHHcCCcccccccccceeEEEecccc--cCCcCChhH--c-CCC
Confidence 7899999998 888899999998888877653 4455667 6 777776432 122222222 2 689
Q ss_pred cEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcC----CCCcccccc------ccEEEeCCCccccCCc--
Q 043610 210 KYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNF----CSKPVDVTR------FGVIYAGAQKNVGPSG-- 271 (430)
Q Consensus 210 ~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~----G~~~idl~~------~d~~~~s~~K~~gp~G-- 271 (430)
++|++++++||||.+++ + |.++ +++|+++++|++|+. |..+..+.. .++++.|++|++|++|
T Consensus 211 ~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r 290 (449)
T 3qgu_A 211 DIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVR 290 (449)
T ss_dssp SEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCC
T ss_pred CEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccce
Confidence 99999999999999998 3 4443 588999999999875 222333322 2488999999999778
Q ss_pred cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC
Q 043610 272 VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN 351 (430)
Q Consensus 272 ~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~ 351 (430)
+|++++++++++.. ..+..-.+.. .....+++++.+.+.++..+++.... ..++++.++++++++++++.|.+ .
T Consensus 291 ~G~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~ 364 (449)
T 3qgu_A 291 LGWTVVPKALKYAN--GEPVHADWNR--VMTTCFNGASNIVQAGGLACLQPEGL-KEMNAMIKFYKENAQILKTTFTE-M 364 (449)
T ss_dssp CEEEECCTTCBCTT--SCBHHHHHHH--HHHHSCCCCCHHHHHHHHHHTSHHHH-HHHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred eEEEecCHHHHhhh--hhhHHHHHHH--HhhcccCCCCHHHHHHHHHHHhhcCH-HHHHHHHHHHHHHHHHHHHHHHH-C
Confidence 89999988775420 0000000000 00112346778888888888764221 24688899999999999999997 5
Q ss_pred CceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHc-CCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610 352 GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKE-KMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 352 G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~ 426 (430)
|+.+.. + ..+ ..+.+.+++ ....++.+.|.++ ||.+.+|.. ..++||||+.. ++++++++++.|++++
T Consensus 365 g~~~~~--~-~~~-~~~~~~~~~-~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~--~~e~i~~~l~~l~~~~ 437 (449)
T 3qgu_A 365 GFSVYG--G-DDA-PYIWVGFPG-KPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG--SRENILEAVRRFKEAY 437 (449)
T ss_dssp TCCEEE--S-SSS-SEEEEECTT-SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHH
T ss_pred CCeeeC--C-CCe-eEEEEECCC-CCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHH
Confidence 877653 1 122 345667762 2233788887664 999877642 24689999654 9999999999999987
Q ss_pred Hh
Q 043610 427 AK 428 (430)
Q Consensus 427 ~~ 428 (430)
++
T Consensus 438 ~~ 439 (449)
T 3qgu_A 438 GK 439 (449)
T ss_dssp C-
T ss_pred Hh
Confidence 64
No 105
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.92 E-value=2.9e-23 Score=203.97 Aligned_cols=307 Identities=12% Similarity=0.093 Sum_probs=213.4
Q ss_pred CCCceeecCC--CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610 68 EDRVFNFAAG--PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATT 145 (430)
Q Consensus 68 ~~~~~l~~~g--p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~ 145 (430)
.+.+++|+.| +.+.++.|++++.+.+..+...+ ... ..++|+.+++++|++++ +|+++ +|+++
T Consensus 14 g~~~id~~~~~~~~~~~~~v~~a~~~~~~~~~~y~---------~~~----~~~lr~~la~~~~~~~~-~i~~t-~g~~~ 78 (350)
T 3fkd_A 14 SSEIVNFSTTVWTDGDKDHLEKHLVENLNCIRHYP---------EPD----AGTLRQMLAKRNSVDNN-AILVT-NGPTA 78 (350)
T ss_dssp --CCEECSCCSCCCSCCHHHHHHHHHTGGGGGSCC---------CTT----CHHHHHHHHHHTTCCGG-GEEEE-SHHHH
T ss_pred cccEEEccCCCCCCCCCHHHHHHHHHhHhHHhcCC---------CCc----HHHHHHHHHHHhCcCHH-HEEEc-CCHHH
Confidence 3667887776 35678999999988774322111 111 13788999999999875 77775 89999
Q ss_pred HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEec-CCCCcCCCCCCccccccCCCccEEEEeecCCCccc
Q 043610 146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWS-GKAEKYTKIPNFDALEQNPDAKYLHICANETIHGV 223 (430)
Q Consensus 146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~-~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~ 223 (430)
+++.++..+. ||+|++..+.+.+.. ..++..| +++.++. .+. .+ ++ . +++++|++++++||||.
T Consensus 79 al~~~~~~l~--gd~Vi~~~p~~~~~~--~~~~~~g~~~~~v~~~~~~--~~--~~-----~-~~~~~v~i~~p~nptG~ 144 (350)
T 3fkd_A 79 AFYQIAQAFR--GSRSLIAIPSFAEYE--DACRMYEHEVCFYPSNEDI--GE--AD-----F-SNMDFCWLCNPNNPDGR 144 (350)
T ss_dssp HHHHHHHHTT--TCEEEEEESCCHHHH--HHHHHTTCEEEEEETTSCG--GG--SC-----C-TTCSEEEEESSCTTTCC
T ss_pred HHHHHHHHHC--CCEEEEeCCCcHHHH--HHHHHcCCeEEEEecCCcc--cc--Cc-----c-CCCCEEEEeCCCCCcCC
Confidence 9999998886 999998887776642 4566678 7777776 321 11 11 1 68999999999999999
Q ss_pred cCC--CCccc-cC-CCcEEEEeccCcCCCCc-----cccccc--cEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCC
Q 043610 224 EFK--EYPSA-KN-STGILVADMSSNFCSKP-----VDVTRF--GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTP 290 (430)
Q Consensus 224 ~~p--ei~~~-~~-~g~~lvvD~a~s~G~~~-----idl~~~--d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p 290 (430)
++| ++.++ +. ...++++|++|+..... ..++.. ++++.|++|++|++| +|++++++++++.+....
T Consensus 145 ~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~- 223 (350)
T 3fkd_A 145 LLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFS- 223 (350)
T ss_dssp CCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTC-
T ss_pred CCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhC-
Confidence 999 66664 21 22499999998643321 122222 378899999999667 899999999887653311
Q ss_pred ccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEE
Q 043610 291 LMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF 370 (430)
Q Consensus 291 ~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f 370 (430)
..++++...+.++..+|+... .-.+.+.++. ++++++++.|.+..|+.+.+ + .+ ..+.+
T Consensus 224 -------------~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~--~--~~-~~~~~ 282 (350)
T 3fkd_A 224 -------------TPWAVNALAIEAAKFILIHPA--QFTLPIRKWQ-RNTVDFITALNRLDGVEVHP--S--GT-TFFLL 282 (350)
T ss_dssp -------------CTTCSCHHHHHHHHHHHHCTT--TTCCCHHHHH-HHHHHHHHHHHHSTTEEECC--C--SS-SEEEE
T ss_pred -------------CCCCCCHHHHHHHHHHHhCHH--HHHHHHHHHH-HHHHHHHHHHhcCCCcEECC--C--CC-cEEEE
Confidence 124677788888877776321 0123344444 88899999998755887753 1 23 33457
Q ss_pred EcCCCchhHHHHHHHHH-cCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 371 TLEKSDLEAEFVKEAAK-EKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 371 ~~~~~~~~~~~~~~L~~-~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
.++.. ...++.+.|.+ +||.+.+|.. ..+++|||++ +++|+++++++|+++.+++
T Consensus 283 ~~~~~-~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~~~~~ 342 (350)
T 3fkd_A 283 RLKKG-TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ---RPAQNQLFIKALETFLEKY 342 (350)
T ss_dssp EESSS-CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHHTC-
T ss_pred ECCCC-CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHHHh
Confidence 77753 23379999988 8999887642 2468999987 7999999999999988653
No 106
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.92 E-value=9e-24 Score=208.62 Aligned_cols=274 Identities=10% Similarity=0.095 Sum_probs=199.2
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCC-CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcC
Q 043610 117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPN-DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKY 194 (430)
Q Consensus 117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~g-d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~ 194 (430)
..++|+.+++++|++++ +|+++ +|++++++.++.+++++| |+|++..+++.++. ..++..| +++.++..+ ++
T Consensus 60 ~~~lr~~la~~~~~~~~-~v~~~-~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~--~~~~~~g~~~~~v~~~~--~~ 133 (356)
T 1fg7_A 60 PKAVIENYAQYAGVKPE-QVLVS-RGADEGIELLIRAFCEPGKDAILYCPPTYGMYS--VSAETIGVECRTVPTLD--NW 133 (356)
T ss_dssp CHHHHHHHHHHHTSCGG-GEEEE-SHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHH--HHHHHHTCEEEECCCCT--TS
T ss_pred HHHHHHHHHHHhCCChH-HEEEc-CCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHH--HHHHHcCCEEEEeeCCC--CC
Confidence 35888999999999865 77765 789999999999998899 99998777766643 3455667 766666542 23
Q ss_pred CCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc---cCCCcEEEEeccCcCCCC--c-ccc-ccc--cEEEe
Q 043610 195 TKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA---KNSTGILVADMSSNFCSK--P-VDV-TRF--GVIYA 261 (430)
Q Consensus 195 g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~---~~~g~~lvvD~a~s~G~~--~-idl-~~~--d~~~~ 261 (430)
.+|+++++ ++ ++++|++++++|+||.++| ++.++ .++|+++++|++|+.... + .++ +.. ++++.
T Consensus 134 --~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~ 210 (356)
T 1fg7_A 134 --QLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILR 210 (356)
T ss_dssp --CCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEE
T ss_pred --CCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEe
Confidence 46888876 66 8999999999999999999 45543 138999999999884331 1 222 223 47889
Q ss_pred CCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043610 262 GAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKK 339 (430)
Q Consensus 262 s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l 339 (430)
|++|++|++| +|++++++++++.+.... ...++|...+.++.++|+....+ .++...++++++
T Consensus 211 s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~--------------~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~ 275 (356)
T 1fg7_A 211 TLSKAFALAGLRCGFTLANEEVINLLMKVI--------------APYPLSTPVADIAAQALSPQGIV-AMRERVAQIIAE 275 (356)
T ss_dssp ESSSTTCCGGGCCEEEEECHHHHHHHHHHS--------------CSSCSCHHHHHHHHHHTSHHHHH-HHHHHHHHHHHH
T ss_pred cchHhhcCchhhhEEEEeCHHHHHHHHHhc--------------CCCCCCHHHHHHHHHHhcCccHH-HHHHHHHHHHHH
Confidence 9999999888 799999998877643210 11256777777777777642111 267888999999
Q ss_pred HHHHHHHHHccCC-ceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecC-CCC--CCCeeEEeecCCCCHHHH
Q 043610 340 AELLYNVIDGSNG-FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK-GHR--SVGGMRASIYNAMPLAGV 415 (430)
Q Consensus 340 ~~~l~~~l~~~~G-~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~-g~~--~~g~iRis~~~~~t~edv 415 (430)
++++.+.|++..+ +...+ . .+ ..+.+.+++ ..++.+.|.++||.+.+ |.. ..+++|||++ +++|+
T Consensus 276 ~~~l~~~L~~~~~~~~~~~---~-~~-~~~~~~~~~---~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~~---~~~e~ 344 (356)
T 1fg7_A 276 REYLIAALKEIPCVEQVFD---S-ET-NYILARFKA---SSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG---TREES 344 (356)
T ss_dssp HHHHHHHHHHSTTEEEECC---C-SS-SEEEEEETT---HHHHHHHHHHTTEECEECTTSTTCTTEEEEECC---CHHHH
T ss_pred HHHHHHHHHhCCCceEECC---C-CC-eEEEEECCC---HHHHHHHHHHCCEEEEECCCCCCCCCeEEEEeC---CHHHH
Confidence 9999999997433 33322 1 23 335566651 33789999999999877 642 2358999997 68999
Q ss_pred HHHHHHHHHH
Q 043610 416 EKLVAFMKDF 425 (430)
Q Consensus 416 ~~ll~~L~~~ 425 (430)
++++++|+++
T Consensus 345 ~~~~~~l~~~ 354 (356)
T 1fg7_A 345 QRVIDALRAE 354 (356)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhh
Confidence 9999999864
No 107
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.92 E-value=6.1e-24 Score=220.38 Aligned_cols=302 Identities=13% Similarity=0.063 Sum_probs=200.3
Q ss_pred cHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC-------C-CCC------cEEEEeCChhHHHHHH
Q 043610 110 GKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC-------T-PND------PVDYIVTGSWGDKAFK 175 (430)
Q Consensus 110 ~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~-------~-~gd------~vl~~~~g~~~~~~~~ 175 (430)
++.+.++.+++++.+++++|.+++ +++++ +|+|+++..++..+. + +|+ +|++....+++.. .
T Consensus 143 s~~~~~le~~~~~~la~l~g~~~~-~~~~t-~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~--~ 218 (515)
T 2jis_A 143 APVFVLMEEEVLRKLRALVGWSSG-DGIFC-PGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQ--K 218 (515)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSSC-EEEEE-SSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH--H
T ss_pred chHHHHHHHHHHHHHHHHhCCCCC-CeEEc-CCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHH--H
Confidence 577788889999999999999864 67765 789999887776652 2 465 4554444566532 3
Q ss_pred HHHHhC----CceEEecCCCCcCCCCCCccccc--cCC------CccEEEEeecCCCccccCC--CCccc-cCCCcEEEE
Q 043610 176 EAQKFC----NPQVIWSGKAEKYTKIPNFDALE--QNP------DAKYLHICANETIHGVEFK--EYPSA-KNSTGILVA 240 (430)
Q Consensus 176 ~a~~~g----~~~~v~~~~~~~~g~~~d~~~l~--i~~------~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvv 240 (430)
.++..| +++.++..+ .+ .+|+++|+ +++ ++++|++++++|++|.+.| +|.++ +++|+++++
T Consensus 219 ~~~~~g~g~~~v~~v~~~~---~~-~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~v 294 (515)
T 2jis_A 219 GAAFLGLGTDSVRVVKADE---RG-KMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHV 294 (515)
T ss_dssp HHHHTTSCGGGEEEECBCT---TS-CBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEE
T ss_pred HHHHcCCCCCcEEEEecCC---CC-cCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEE
Confidence 334443 355566532 23 57888886 543 4899999999999999999 78886 689999999
Q ss_pred eccCcCCCCccc-----cc---cccEEEeCCCcccc-CCccEEEEEcHH--HHhccCCCCCccc-cccch----hhcC--
Q 043610 241 DMSSNFCSKPVD-----VT---RFGVIYAGAQKNVG-PSGVTIVIVRKD--LLGNAQDKTPLML-DYKIH----DENN-- 302 (430)
Q Consensus 241 D~a~s~G~~~id-----l~---~~d~~~~s~~K~~g-p~G~g~l~v~~~--~~~~~~~~~p~~~-~~~~~----~~~~-- 302 (430)
|++++.+..+.+ +. ..|++++++|||++ |.|+|+++++++ +++......+.|+ +.... .+.+
T Consensus 295 D~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~ 374 (515)
T 2jis_A 295 DAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDK 374 (515)
T ss_dssp EETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGG
T ss_pred ehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCC
Confidence 999998877654 43 44899999999996 999999999877 6554221122222 10000 0000
Q ss_pred CCCCC--ccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC-----
Q 043610 303 SLYNT--PPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS----- 375 (430)
Q Consensus 303 ~~~~T--~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~----- 375 (430)
....+ .....++++ ++.+.. .|++++.++..++++++++.|++..|++++. ++ .. .+++|.+.+.
T Consensus 375 ~~~~~rr~~al~~~~~---l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~-~~--~~-~~v~f~~~p~~~~~~ 446 (515)
T 2jis_A 375 VVQCGRRVDCLKLWLM---WKAQGD-QGLERRIDQAFVLARYLVEEMKKREGFELVM-EP--EF-VNVCFWFVPPSLRGK 446 (515)
T ss_dssp CSCSSCCCCHHHHHHH---HHHHHH-HHHHHHHHHHHHHHHHHHHHHHTSTTEEESS-CC--SS-SEEEEEECCGGGTTC
T ss_pred CCCCCCcccHHHHHHH---HHHHhH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEEeC-CC--Ce-eEEEEEEeCcccccc
Confidence 00000 112233333 443432 4789999999999999999999866898874 22 22 3577765211
Q ss_pred ----chhH-------HHHHHHHHcCCeecCC---CCCCCeeEEee-cCCCCHHHHHHHHHHHHHHHH
Q 043610 376 ----DLEA-------EFVKEAAKEKMVQLKG---HRSVGGMRASI-YNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 376 ----~~~~-------~~~~~L~~~Gi~~~~g---~~~~g~iRis~-~~~~t~edv~~ll~~L~~~~~ 427 (430)
.... ++.+.|.+.|+..... ....+.+||++ +.++|++||+++++.|+++++
T Consensus 447 ~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~ 513 (515)
T 2jis_A 447 QESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQ 513 (515)
T ss_dssp TTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred ccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 1111 2556677778765321 11134799999 788999999999999998865
No 108
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.92 E-value=1.6e-24 Score=219.13 Aligned_cols=325 Identities=13% Similarity=0.122 Sum_probs=219.7
Q ss_pred CCCceeecCCCC----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh----C---CCCCcEE
Q 043610 68 EDRVFNFAAGPA----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL----N---IPQEYSV 136 (430)
Q Consensus 68 ~~~~~l~~~gp~----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~----g---~~~~~~v 136 (430)
.+.+++|+.|-. ..++.+++++.+.+.+.. .. ...++.. ....++|+.+++++ | ++++ +|
T Consensus 42 ~~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~---~~---~~~y~~~--~g~~~lr~~la~~l~~~~g~~~~~~~-~v 112 (425)
T 1vp4_A 42 DKDAISFGGGVPDPETFPRKELAEIAKEIIEKEY---HY---TLQYSTT--EGDPVLKQQILKLLERMYGITGLDED-NL 112 (425)
T ss_dssp STTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSH---HH---HTSCCCT--TCCHHHHHHHHHHHHHHHCCCSCCGG-GE
T ss_pred CCCceeCCCCCCCcccCCHHHHHHHHHHHHhhcc---hh---hcCCCCC--CCCHHHHHHHHHHHHhccCCCCCCcc-cE
Confidence 345778876632 256789999988775411 00 1111110 01124445555555 8 4454 67
Q ss_pred EEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC------
Q 043610 137 LFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP------ 207 (430)
Q Consensus 137 v~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~------ 207 (430)
+++ +|++++++.++.+++++||+|++..+++.+. ...++..| +++.++..+ .+ +|+++++ +++
T Consensus 113 ~~t-~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~---~~--~d~~~l~~~l~~~~~~~~ 184 (425)
T 1vp4_A 113 IFT-VGSQQALDLIGKLFLDDESYCVLDDPAYLGA--INAFRQYLANFVVVPLED---DG--MDLNVLERKLSEFDKNGK 184 (425)
T ss_dssp EEE-EHHHHHHHHHHHHHCCTTCEEEEEESCCHHH--HHHHHTTTCEEEEEEEET---TE--ECHHHHHHHHHHHHHTTC
T ss_pred EEe-ccHHHHHHHHHHHhCCCCCEEEEeCCCcHHH--HHHHHHcCCEEEEeccCC---CC--CCHHHHHHHHHhhhhccc
Confidence 765 7899999999999989999999888887664 34455677 777777642 22 6778776 444
Q ss_pred --CccEE-EEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCC----Ccccccc-----ccEEEeCCCccccC
Q 043610 208 --DAKYL-HICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS----KPVDVTR-----FGVIYAGAQKNVGP 269 (430)
Q Consensus 208 --~~~lv-~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~~idl~~-----~d~~~~s~~K~~gp 269 (430)
++++| ++++++|+||.++| + |.++ +++|+++++|++|+.+. .+.++.. .++++.|++|++|
T Consensus 185 ~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~- 263 (425)
T 1vp4_A 185 IKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA- 263 (425)
T ss_dssp GGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-
T ss_pred CCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-
Confidence 78888 57899999999998 3 4444 58999999999988643 2233322 2478899999999
Q ss_pred Cc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Q 043610 270 SG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVI 347 (430)
Q Consensus 270 ~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l 347 (430)
+| +|++++++++++.+..... ...++.|...++++..+|+.......++.+.++++++++++.+.|
T Consensus 264 ~G~r~G~~~~~~~~~~~l~~~~~------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L 331 (425)
T 1vp4_A 264 PGLRIGMVAGSKEFIRKIVQAKQ------------SADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNAL 331 (425)
T ss_dssp GGGCEEEEECCHHHHHHHHHHHH------------HHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred cccceEEEeeCHHHHHHHHHHhh------------hhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78 6999999988776432000 011345777888888888752001246788888999999999999
Q ss_pred Hcc-C---CceecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCC------CCCeeEEeecCCCCHHHHH
Q 043610 348 DGS-N---GFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHR------SVGGMRASIYNAMPLAGVE 416 (430)
Q Consensus 348 ~~~-~---G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~------~~g~iRis~~~~~t~edv~ 416 (430)
.+. . |+.+.. + .....+.+.+++ +.+. ++.+.|.++||.+.+|.. ..+++|||++.. +++|++
T Consensus 332 ~~~~~~~~g~~~~~--~--~~g~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~e~i~ 405 (425)
T 1vp4_A 332 EEYFSDIPGVKWVK--S--EGGLFIWLTLPE-GFDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLP-PDEKIV 405 (425)
T ss_dssp HHHSTTSTTCEECC--C--SBSSEEEEECCT-TCCTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSS-CHHHHH
T ss_pred HHhCCCCCceEEec--C--CccEEEEEEcCC-CCCHHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCCC-CHHHHH
Confidence 863 2 576542 1 122356677764 2223 688888888999876532 235799999864 899999
Q ss_pred HHHHHHHHHHHh
Q 043610 417 KLVAFMKDFQAK 428 (430)
Q Consensus 417 ~ll~~L~~~~~~ 428 (430)
++++.|++++++
T Consensus 406 ~~l~~l~~~l~~ 417 (425)
T 1vp4_A 406 EGIKRLREVVLE 417 (425)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988754
No 109
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.92 E-value=1.2e-23 Score=214.54 Aligned_cols=327 Identities=11% Similarity=0.070 Sum_probs=220.7
Q ss_pred CCCceeecCCCC----CCcHHHHHHHHHHhhhccCCCCcccccCCCc--HHHHHHHHHHHHHHHHHhCC-CCCcEEEEEe
Q 043610 68 EDRVFNFAAGPA----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRG--KEFKSIIEKAESDLRALLNI-PQEYSVLFLQ 140 (430)
Q Consensus 68 ~~~~~l~~~gp~----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~--~~~~~~~~~~r~~la~l~g~-~~~~~vv~~~ 140 (430)
.+.+++|+.|-. .+++.+.+++.+.+.+.. .. ..+++ ....++.+.+.+.+++.+|. +++ +|+++
T Consensus 75 ~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~---~~---~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-~v~~t- 146 (448)
T 3aow_A 75 TSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYA---DK---ALQYGTTKGFTPLRETLMKWLGKRYGISQDN-DIMIT- 146 (448)
T ss_dssp TSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSH---HH---HHSCCCTTCCHHHHHHHHHHHHHHHCCCTTS-EEEEE-
T ss_pred CCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhh---HH---HhCCCCCCCcHHHHHHHHHHHHHhcCcCChh-hEEEe-
Confidence 346788877642 156788888888775310 00 01111 11222333333444344498 444 77664
Q ss_pred CcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC----C--CccE
Q 043610 141 GGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN----P--DAKY 211 (430)
Q Consensus 141 ~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~----~--~~~l 211 (430)
+|++++++.++..++++||+|++..+++.+. ...++..| +++.++..+ .| +|+++|+ ++ + ++++
T Consensus 147 ~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~---~g--~d~~~L~~~l~~~~~~~~~~k~ 219 (448)
T 3aow_A 147 SGSQQALDLIGRVFLNPGDIVVVEAPTYLAA--LQAFNFYEPQYIQIPLDD---EG--MKVEILEEKLKELKSQGKKVKV 219 (448)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEEESCCHHH--HHHHHTTCCEEEEEEEET---TE--ECHHHHHHHHHHHHHTTCCEEE
T ss_pred CcHHHHHHHHHHHHcCCCCEEEEeCCChHHH--HHHHHHcCCEEEEeccCC---CC--CCHHHHHHHHhhhhccCCCCeE
Confidence 7899999999999999999999988877664 34455667 777777642 23 6788886 55 5 7898
Q ss_pred E-EEeecCCCccccCC-----CCccc-cCCCcEEEEeccCcCCCC----ccccccc-----cEEEeCCCccccCCc--cE
Q 043610 212 L-HICANETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCSK----PVDVTRF-----GVIYAGAQKNVGPSG--VT 273 (430)
Q Consensus 212 v-~i~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~----~idl~~~-----d~~~~s~~K~~gp~G--~g 273 (430)
| ++++++||||.+++ +|.++ +++|+++|+|++|+.+.. ..++..+ ++++.|++|++| +| +|
T Consensus 220 v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG 298 (448)
T 3aow_A 220 VYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIG 298 (448)
T ss_dssp EEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCE
T ss_pred EEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEE
Confidence 7 46889999999998 34554 588999999999886432 1223222 378899999999 78 89
Q ss_pred EEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc-C-
Q 043610 274 IVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS-N- 351 (430)
Q Consensus 274 ~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~-~- 351 (430)
++++++++++.+.... .. ...++|...+.++..+|+...-...++.++++++++++++.+.|++. .
T Consensus 299 ~v~~~~~l~~~l~~~~----------~~--~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 366 (448)
T 3aow_A 299 WMVGDPGIIRKMEIAK----------QS--TDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPE 366 (448)
T ss_dssp EEEECHHHHHHHHHHH----------HH--HHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred EEEeCHHHHHHHHHHH----------HH--hcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999887643200 00 01245777777777777632001246778888889999999999863 3
Q ss_pred CceecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCC------CCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610 352 GFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHR------SVGGMRASIYNAMPLAGVEKLVAFMKD 424 (430)
Q Consensus 352 G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~------~~g~iRis~~~~~t~edv~~ll~~L~~ 424 (430)
|+.+.. + .....+.+.+++ +.+. ++.++|.++||.+.+|.. ..+++|||++. .++++++++++.|++
T Consensus 367 g~~~~~--p--~~g~~~~v~~~~-~~~~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~-~~~e~i~~~~~~L~~ 440 (448)
T 3aow_A 367 GVKWTK--P--EGGMFIWVTLPD-GIDSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTY-VDEDKIMEGIKRLAE 440 (448)
T ss_dssp TCEECC--C--SBSSEEEEECST-TCCHHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSS-SCTHHHHHHHHHHHH
T ss_pred CeEEeC--C--CccEEEEEEcCC-CCCHHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHH
Confidence 676542 2 122445677764 2333 799999888999877632 24579999885 489999999999999
Q ss_pred HHHh
Q 043610 425 FQAK 428 (430)
Q Consensus 425 ~~~~ 428 (430)
++++
T Consensus 441 ~l~~ 444 (448)
T 3aow_A 441 TIKE 444 (448)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 110
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.92 E-value=7.6e-24 Score=212.63 Aligned_cols=334 Identities=14% Similarity=0.119 Sum_probs=221.0
Q ss_pred CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCc-HHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610 70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRG-KEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA 148 (430)
Q Consensus 70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~-~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~ 148 (430)
+.+.+.+++.++++.|++++.+.+.+....+... .....+ .......+.+++.+++++|++++ +|+ ++ +||+++.
T Consensus 26 ~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~i~-~~-sGt~a~~ 101 (417)
T 3n0l_A 26 EGLEMIASENFTLPEVMEVMGSILTNKYAEGYPG-KRYYGGCEFVDEIETLAIERCKKLFNCKFA-NVQ-PN-SGSQANQ 101 (417)
T ss_dssp HSEECCTTCCCCCHHHHHHHTBGGGGCCCCEETT-EESSSCCHHHHHHHHHHHHHHHHHHTCSEE-ECC-CS-SHHHHHH
T ss_pred cCeeeecccCCCCHHHHHHHhhhhhccccccCCC-ccccccchHHHHHHHHHHHHHHHHhCCCCc-ceE-ec-cHHHHHH
Confidence 4566778888889999999998874422222110 011222 23344555688999999999763 454 44 4589999
Q ss_pred HHHhhcCCCCCcEEEEeCChhHHHHH-HHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEeecCCCccc
Q 043610 149 AVPLNLCTPNDPVDYIVTGSWGDKAF-KEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHICANETIHGV 223 (430)
Q Consensus 149 ~~~~sl~~~gd~vl~~~~g~~~~~~~-~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~~~~t~tG~ 223 (430)
.++..++++||+|++..+++.+.... ......| ....++...+ +.+ .+|+++++ ++ +++++|+++++++ |.
T Consensus 102 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~-~~d~~~l~~~i~~~~~~~v~~~~~~~--G~ 177 (417)
T 3n0l_A 102 GVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE-LDG-RIDYEKVREIAKKEKPKLIVCGASAY--AR 177 (417)
T ss_dssp HHHHHHSCTTCEEEEECC----------------CCSEEEEECCC-TTS-SCCHHHHHHHHHHHCCSEEEECCSSC--CS
T ss_pred HHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC-CCC-CcCHHHHHHHHHhcCCeEEEECCccc--Cc
Confidence 99999999999999887766553211 1112233 3434433221 122 47888887 55 6899999888664 99
Q ss_pred cCC--CCccc-cCCCcEEEEeccCcCCCC-----ccccccccEEEeCCCccc-cCCccEEEEEc-HHHHhccCCCCCccc
Q 043610 224 EFK--EYPSA-KNSTGILVADMSSNFCSK-----PVDVTRFGVIYAGAQKNV-GPSGVTIVIVR-KDLLGNAQDKTPLML 293 (430)
Q Consensus 224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~~-----~idl~~~d~~~~s~~K~~-gp~G~g~l~v~-~~~~~~~~~~~p~~~ 293 (430)
..| +|.++ +++|+++++|++|+.|.. +.++...|++++|+||++ |+.| |+++.+ +++.+.+.+.
T Consensus 178 ~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~~~~~----- 251 (417)
T 3n0l_A 178 VIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRG-GIIMTNDEELAKKINSA----- 251 (417)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTCSCSC-EEEEESCHHHHHHHHHH-----
T ss_pred cCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccccceEEEeeCccccCCCCe-eEEEECCHHHHHHHhhh-----
Confidence 999 78886 689999999999875543 444555689999999999 6877 999998 6776654210
Q ss_pred cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC
Q 043610 294 DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE 373 (430)
Q Consensus 294 ~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~ 373 (430)
......++++...+.++..+++...+ .++++..++..++++++.+.|.+ .|+.+.. .. ... ..+.+.+.
T Consensus 252 ------~~~~~~~~~~~~~~aa~~~a~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~-~~~-~~~~~~~~ 320 (417)
T 3n0l_A 252 ------IFPGIQGGPLMHVIAAKAVGFKFNLS-DEWKVYAKQVRTNAQVLANVLMD-RKFKLVS-DG-TDN-HLVLMSFL 320 (417)
T ss_dssp ------HTTTTCSSCCHHHHHHHHHHHHHHTS-HHHHHHHHHHHHHHHHHHHHHHH-TTCEEGG-GS-CSS-SEEEEECT
T ss_pred ------hCCcccCCcHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHh-CCceecc-CC-CCc-eEEEEEcc
Confidence 00112357777777887778776432 35788999999999999999997 7887763 11 122 34555665
Q ss_pred CCchhH-HHHHHHHHcCCeecCCC----C----CCCeeEEeecCC----CCHHHHHHHHHHHHHHHHh
Q 043610 374 KSDLEA-EFVKEAAKEKMVQLKGH----R----SVGGMRASIYNA----MPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 374 ~~~~~~-~~~~~L~~~Gi~~~~g~----~----~~g~iRis~~~~----~t~edv~~ll~~L~~~~~~ 428 (430)
+.+.+. ++.+.|.++||.+..+. . ...++|+++... .+++|+++++++|+++++.
T Consensus 321 ~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 388 (417)
T 3n0l_A 321 DREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDD 388 (417)
T ss_dssp TSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 433344 67778888999875321 0 124699997642 5789999999999998764
No 111
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.92 E-value=1.4e-23 Score=216.08 Aligned_cols=338 Identities=14% Similarity=0.038 Sum_probs=219.7
Q ss_pred CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCC--------cEEEEEeC
Q 043610 70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE--------YSVLFLQG 141 (430)
Q Consensus 70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~--------~~vv~~~~ 141 (430)
+.+.+.+++...+..+.+++...+.. ... ....++...++.+++++.+++++|.+.+ .++++ ++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~n~---~~~----~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~-t~ 146 (486)
T 1js3_A 75 YFFAYFPTASSYPAMLADMLCGAIGC---IGF----SWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVI-QG 146 (486)
T ss_dssp TBCSSSCCCCCHHHHHHHHHHHHHCC---CCS----SGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEE-ES
T ss_pred CceEeCCCCCCHHHHHHHHHHHHhCc---Ccc----ccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEE-cC
Confidence 34444455544555667777666521 111 1112466777788999999999999742 24566 48
Q ss_pred cHHHHHHHHHhhcCC---C------CC--------c--EEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCcc
Q 043610 142 GATTQFAAVPLNLCT---P------ND--------P--VDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFD 201 (430)
Q Consensus 142 gaT~a~~~~~~sl~~---~------gd--------~--vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~ 201 (430)
|+|+|+..++..+.. + || + |++....|++ +.+.++..| +++.++... . ..+|++
T Consensus 147 ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s--~~~~~~~~G~~v~~v~~d~---~-~~~d~~ 220 (486)
T 1js3_A 147 SASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSS--VERAGLIGGVKLKAIPSDG---K-FAMRAS 220 (486)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHH--HHHHHHHHTCEEEEECCCT---T-SCCCHH
T ss_pred CcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcHH--HHHHHHhCCCceEEeecCC---C-CCCCHH
Confidence 899999887766421 1 43 4 3334455655 345566678 888887742 2 357999
Q ss_pred ccc--cCCCcc------EEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcc-c-------cccccEEEeC
Q 043610 202 ALE--QNPDAK------YLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV-D-------VTRFGVIYAG 262 (430)
Q Consensus 202 ~l~--i~~~~~------lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i-d-------l~~~d~~~~s 262 (430)
+|+ ++++++ +|++++++|+||.+.| +|.++ +++|+++++|++++.+.... + +...|+++++
T Consensus 221 ~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~ 300 (486)
T 1js3_A 221 ALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFN 300 (486)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEEC
T ss_pred HHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEc
Confidence 987 666554 8999999999999988 78886 68999999999998766432 1 2345889999
Q ss_pred CCcccc-CCccEEEEEcHHH--HhccCCCCCccccccch-----h--hcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHH
Q 043610 263 AQKNVG-PSGVTIVIVRKDL--LGNAQDKTPLMLDYKIH-----D--ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEV 332 (430)
Q Consensus 263 ~~K~~g-p~G~g~l~v~~~~--~~~~~~~~p~~~~~~~~-----~--~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v 332 (430)
+|||++ |.|+|+++++++. .+.+.. .+.|+..... . ......++... ...++..+++.+.. .|++++
T Consensus 301 ~hK~~~~p~~~G~l~~~~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~rr~-~~~~~~~al~~~g~-~g~~~~ 377 (486)
T 1js3_A 301 PHKWLLVNFDCSAMWVKRRTDLTGAFKL-DPVYLKHSHQGSGLITDYRHWQLPLGRRF-RSLKMWFVFRMYGV-KGLQAY 377 (486)
T ss_dssp HHHHSSCCSSCEEEEESCHHHHHGGGC-------------CCSCCCGGGSSSCSCCCC-THHHHHHHHHHHHH-HHHHHH
T ss_pred hhhhcCCCcceEEEEEeCHHHHHHHhcC-CchhhCCCcccccCCCCccccCCCCCCch-hHHHHHHHHHHHhH-HHHHHH
Confidence 999996 8899999997653 344421 2223211000 0 00001111111 23445556665543 478999
Q ss_pred HHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc-hhHHHHHHHHHcCCeecCCC--CCCCeeEEeec-C
Q 043610 333 EKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD-LEAEFVKEAAKEKMVQLKGH--RSVGGMRASIY-N 408 (430)
Q Consensus 333 ~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~-~~~~~~~~L~~~Gi~~~~g~--~~~g~iRis~~-~ 408 (430)
.+++.++++++++.|.+..|++++. ++ . ..+++|.+++.. ...++.++|.++|++...+. ...+.+|+++. .
T Consensus 378 ~~~~~~~a~~l~~~L~~~~~~~~~~-~~--~-~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~ 453 (486)
T 1js3_A 378 IRKHVQLSHEFEAFVLQDPRFEVCA-EV--T-LGLVCFRLKGSDGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSR 453 (486)
T ss_dssp HHHHHHHHHHHHHHHHHCTTEEECS-CC--C-SSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCT
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEeC-CC--c-eeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCC
Confidence 9999999999999999866898863 22 2 346888886421 23478888988887643221 12347999974 4
Q ss_pred CCCHHHHHHHHHHHHHHHHh
Q 043610 409 AMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 409 ~~t~edv~~ll~~L~~~~~~ 428 (430)
+++++||+++++.|++++++
T Consensus 454 ~~t~~di~~~~~~l~~~~~~ 473 (486)
T 1js3_A 454 KVESGHVRLAWEHIRGLAAE 473 (486)
T ss_dssp TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 68999999999999988653
No 112
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.92 E-value=1.1e-23 Score=211.07 Aligned_cols=328 Identities=12% Similarity=0.067 Sum_probs=212.7
Q ss_pred CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHH--hC-CCCCcEEEEEeCcH
Q 043610 69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRAL--LN-IPQEYSVLFLQGGA 143 (430)
Q Consensus 69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l--~g-~~~~~~vv~~~~ga 143 (430)
+.++.|+.|. .++++.|++++.+.+.+.... .. ...+++. ....++|+.++++ +| ++++ +|+++ +|+
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~-~~---~~~y~~~--~g~~~lr~~la~~l~~g~~~~~-~v~~~-~G~ 104 (400)
T 3asa_A 33 HTVINLSIGDTTQPLNASVAEAFASSIARLSSP-TT---CRGYGPD--FGLPALRQKLSEDFYRGFVDAK-EIFIS-DGA 104 (400)
T ss_dssp SCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSS-SC---CCCCCCT--TCCHHHHHHHHHTTSTTSSCGG-GEEEE-SCH
T ss_pred CceEeccCCCCCCCCCHHHHHHHHHHHhccccc-cc---ccCCCCC--CCCHHHHHHHHHHHHcCCCCHH-HEEEc-cCh
Confidence 3455555553 367889999999887653211 00 1112111 1234778888888 57 5554 77775 789
Q ss_pred HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-C-ceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCc
Q 043610 144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-N-PQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIH 221 (430)
Q Consensus 144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~-~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~t 221 (430)
+++++.++ .++++||+|++..+++.+.. ..++..| + +..++..++ .+..++ ++..+++++|++++++|||
T Consensus 105 ~~al~~~~-~~~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~--~~~~~~---l~~~~~~~~v~l~~p~npt 176 (400)
T 3asa_A 105 KVDLFRLL-SFFGPNQTVAIQDPSYPAYL--DIARLTGAKEIIALPCLQE--NAFFPE---FPEDTHIDILCLCSPNNPT 176 (400)
T ss_dssp HHHHHHHH-HHHCSSCEEEEEESCCHHHH--HHHHHTTCSEEEEEECCGG--GTTCCC---CCTTCCCSEEEEESSCTTT
T ss_pred HHHHHHHH-HHcCCCCEEEECCCCcHHHH--HHHHHcCCcceEecccchh--cCcccC---hhhccCccEEEEeCCCCCC
Confidence 99999864 55588999998888776643 4456678 7 777776431 111222 3311678999999999999
Q ss_pred cccCC--C---Cccc-cCCCcEEEEeccCc-CC---CCcccccc----cc--EEEeCCCccccCCc--cEEEEEcHHHHh
Q 043610 222 GVEFK--E---YPSA-KNSTGILVADMSSN-FC---SKPVDVTR----FG--VIYAGAQKNVGPSG--VTIVIVRKDLLG 283 (430)
Q Consensus 222 G~~~p--e---i~~~-~~~g~~lvvD~a~s-~G---~~~idl~~----~d--~~~~s~~K~~gp~G--~g~l~v~~~~~~ 283 (430)
|.++| + |.++ +++|+++++|++|+ ++ ..+.++.. .| +++.|++|++|++| +|++++++++.+
T Consensus 177 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~ 256 (400)
T 3asa_A 177 GTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTY 256 (400)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBC
T ss_pred CCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhcc
Confidence 99999 3 4443 58999999999988 53 22333322 23 78899999999888 799999877631
Q ss_pred ccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCC
Q 043610 284 NAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVR 363 (430)
Q Consensus 284 ~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~r 363 (430)
........... ......++++|.+.+.++..+|+.. .++.+.++++++++++++.|.+ .|+++.+ + ..
T Consensus 257 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~-~~ 324 (400)
T 3asa_A 257 ADGHFVIQDWE----RFLSTTFNGASIPAQEAGVAGLSIL----PQLEAIHYYRENSDLLRKALLA-TGFEVFG--G-EH 324 (400)
T ss_dssp TTSCBHHHHHH----HHHHHHCCCCCHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHHHHHH-TTCEEEE--C-SS
T ss_pred chhhhHHHHHH----HHhccCccCCChHHHHHHHHHhCcH----HHHHHHHHHHHHHHHHHHHHHH-CCCeeeC--C-CC
Confidence 10000000000 0000112467888888887777632 4678899999999999999997 5887653 1 12
Q ss_pred ccceEEEE-cCCCchhH-HHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 364 SFMNVPFT-LEKSDLEA-EFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 364 s~~iv~f~-~~~~~~~~-~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
+ ..+.+. +++ +.+. ++.+.|. ++||.+.+|.. ..+++|||+ ++++++++++++.|++++++
T Consensus 325 ~-~~~~~~~~~~-~~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~--~~~~e~i~~~l~~l~~~~~~ 392 (400)
T 3asa_A 325 A-PYLWVKPTQA-NISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSS--LGKREDILAACERLQMAPAL 392 (400)
T ss_dssp S-SEEEEECCCT-TCCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEEC--CSCHHHHHHHHHHHHC----
T ss_pred c-eEEEEeccCC-CCCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEe--eCCHHHHHHHHHHHHHHHHh
Confidence 3 345667 653 2223 6887775 45999877642 135799994 56899999999999988764
No 113
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.92 E-value=1.6e-23 Score=209.89 Aligned_cols=327 Identities=13% Similarity=0.068 Sum_probs=219.4
Q ss_pred CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcH--HHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCc
Q 043610 69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGK--EFKSIIEKAESDLRALLNI--PQEYSVLFLQGG 142 (430)
Q Consensus 69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~--~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~g 142 (430)
+.+++|+.|- .++|+.|++++.+.+.+.. .+++.. ...+..+.+.+.+.+.+|. +++.+|+++ +|
T Consensus 23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~-~g 93 (410)
T 3e2y_A 23 PSVVNLGQGFPDISPPSYVKEELSKAAFIDN--------MNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVA-VG 93 (410)
T ss_dssp TTSEECSSCCCCSCCCHHHHHHHHHHHTCGG--------GGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEE-SH
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCcc--------ccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEe-CC
Confidence 4566666654 3578999999998875321 111111 1233334444555555554 331267765 89
Q ss_pred HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCc-------CCCCCCccccc--cCCCccEE
Q 043610 143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEK-------YTKIPNFDALE--QNPDAKYL 212 (430)
Q Consensus 143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~-------~g~~~d~~~l~--i~~~~~lv 212 (430)
++++++.++..++++||+|++..+.+.+.. ..++..| +++.++...... .+..+|+++++ +++++++|
T Consensus 94 ~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v 171 (410)
T 3e2y_A 94 AYGSLFNSIQGLVDPGDEVIIMVPFYDCYE--PMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAI 171 (410)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEE
T ss_pred cHHHHHHHHHHhcCCCCEEEEeCCCchhhH--HHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEE
Confidence 999999999999999999998888776643 3456677 777776642100 11236777776 67889999
Q ss_pred EEeecCCCccccCC-----CCccc-cCCCcEEEEeccCcCCC----Cccccccc------cEEEeCCCccccCCc--cEE
Q 043610 213 HICANETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCS----KPVDVTRF------GVIYAGAQKNVGPSG--VTI 274 (430)
Q Consensus 213 ~i~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~----~~idl~~~------d~~~~s~~K~~gp~G--~g~ 274 (430)
++++++|+||.+++ +|.++ +++|+++++|++|+... .+.++..+ .+++.|++|++|++| +|+
T Consensus 172 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~ 251 (410)
T 3e2y_A 172 ILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGW 251 (410)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEE
T ss_pred EEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEE
Confidence 99999999999987 35554 58899999999987532 22233222 278899999999778 899
Q ss_pred EEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH-----HhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610 275 VIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL-----ELGGLNEVEKMNRKKAELLYNVIDG 349 (430)
Q Consensus 275 l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~-----~~~g~~~v~~~~~~l~~~l~~~l~~ 349 (430)
++.++++++.+.. . .. ...++++...+.++..+|+... ....++.+.++++++++++++.|++
T Consensus 252 ~~~~~~~~~~~~~-------~----~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 319 (410)
T 3e2y_A 252 SIGPAHLIKHLQT-------V----QQ-NSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNS 319 (410)
T ss_dssp EECCHHHHHHHHH-------H----HH-TTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEECHHHHHHHHH-------H----HH-hhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988776421 0 00 1224667788888888886310 1235788899999999999999997
Q ss_pred cCCceecCCCCCCCccceEEEEcCC--Cch---------hHHHHHHH-HHcCCeecCCCCC---------CCeeEEeecC
Q 043610 350 SNGFYKCPVEKSVRSFMNVPFTLEK--SDL---------EAEFVKEA-AKEKMVQLKGHRS---------VGGMRASIYN 408 (430)
Q Consensus 350 ~~G~~~~~~~~~~rs~~iv~f~~~~--~~~---------~~~~~~~L-~~~Gi~~~~g~~~---------~g~iRis~~~ 408 (430)
.|+.+.. + .....+.+.+.. .+. +.+++++| +++||.+.+|... .+++|||+..
T Consensus 320 -~g~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~ 394 (410)
T 3e2y_A 320 -VGLKPIV--P--DGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIK 394 (410)
T ss_dssp -TTCEEEB--C--SBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCC
T ss_pred -CCCeecC--C--CccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcC
Confidence 5887653 1 122334444432 111 12677765 6679998775421 3689999876
Q ss_pred CCCHHHHHHHHHHHHHH
Q 043610 409 AMPLAGVEKLVAFMKDF 425 (430)
Q Consensus 409 ~~t~edv~~ll~~L~~~ 425 (430)
++++++++++.|+++
T Consensus 395 --~~e~l~~~l~~l~~~ 409 (410)
T 3e2y_A 395 --KDSTLDAAEEIFRAW 409 (410)
T ss_dssp --CHHHHHHHHHHHHTC
T ss_pred --CHHHHHHHHHHHHhc
Confidence 999999999998763
No 114
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.92 E-value=1.7e-23 Score=204.60 Aligned_cols=298 Identities=13% Similarity=0.076 Sum_probs=210.6
Q ss_pred CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC---CCCCcEEEEEeCcHH
Q 043610 70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN---IPQEYSVLFLQGGAT 144 (430)
Q Consensus 70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g---~~~~~~vv~~~~gaT 144 (430)
..+.|..|- .+.|+.|++++.+.+.+. + .+++... ...++|+.++++++ ++++ +|+++ +|++
T Consensus 20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~---~-----~~~y~~~---~~~~lr~~la~~~~~~~~~~~-~v~~~-~G~~ 86 (335)
T 1uu1_A 20 DKTYLALNENPFPFPEDLVDEVFRRLNSD---A-----LRIYYDS---PDEELIEKILSYLDTDFLSKN-NVSVG-NGAD 86 (335)
T ss_dssp CSEEESSCCCSSCCCHHHHHHHHHTCCGG---G-----GGSCCCS---SCHHHHHHHHHHHTCSSCCGG-GEEEE-SSHH
T ss_pred cceECCCCCCCCCCCHHHHHHHHHHhhhh---h-----hhcCCCC---chHHHHHHHHHHcCCCCCCHH-HEEEc-CChH
Confidence 334444432 467899999998876321 1 1112111 14588899999999 7665 77775 7899
Q ss_pred HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccc
Q 043610 145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGV 223 (430)
Q Consensus 145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~ 223 (430)
++++.++..+ ||+|++. +++.+. ...++..| +++.++..+ ++ .+|++++ +++++|++++++|+||.
T Consensus 87 ~al~~~~~~~---gd~Vl~~-p~y~~~--~~~~~~~g~~~~~v~~~~--~~--~~d~~~l---~~~~~v~l~~p~nptG~ 153 (335)
T 1uu1_A 87 EIIYVMMLMF---DRSVFFP-PTYSCY--RIFAKAVGAKFLEVPLTK--DL--RIPEVNV---GEGDVVFIPNPNNPTGH 153 (335)
T ss_dssp HHHHHHHHHS---SEEEECS-SSCHHH--HHHHHHHTCEEEECCCCT--TS--CCCCCCC---CTTEEEEEESSCTTTCC
T ss_pred HHHHHHHHHh---CCcEEEC-CCcHHH--HHHHHHcCCeEEEeccCC--CC--CCCHHHc---CCCCEEEEeCCCCCCCC
Confidence 9999998887 8898877 666553 34556677 666666532 12 3566665 68999999999999999
Q ss_pred cCC--CCccc-cCCCcEEEEeccCc-CCCCc-cc-cccc--cEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccc
Q 043610 224 EFK--EYPSA-KNSTGILVADMSSN-FCSKP-VD-VTRF--GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLML 293 (430)
Q Consensus 224 ~~p--ei~~~-~~~g~~lvvD~a~s-~G~~~-id-l~~~--d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~ 293 (430)
++| ++.++ +..| ++++|++|+ ++..+ ++ ++.. ++++.|++|++|++| +|++++++++++.+.+..
T Consensus 154 ~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~---- 228 (335)
T 1uu1_A 154 VFEREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVR---- 228 (335)
T ss_dssp CCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHS----
T ss_pred CCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhc----
Confidence 999 66665 4448 899999987 32211 23 2223 488999999999778 799999998877643200
Q ss_pred cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC
Q 043610 294 DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE 373 (430)
Q Consensus 294 ~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~ 373 (430)
..+++|...++++..+|+.. ..++.+.++++++++++.+.|.+. |+++.+ . .+ ..+.+.++
T Consensus 229 ----------~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~---~-~~-~~~~~~~~ 289 (335)
T 1uu1_A 229 ----------LPFNVSYVSQMFAKVALDHR---EIFEERTKFIVEERERMKSALREM-GYRITD---S-RG-NFVFVFME 289 (335)
T ss_dssp ----------CTTCSCHHHHHHHHHHHHTH---HHHHHHHHHHHHHHHHHHHHHHHH-TCCBCC---C-CS-SEEEEECC
T ss_pred ----------CCCCcCHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHHHHHHC-CcEEcC---C-CC-eEEEEECC
Confidence 11477888888888888752 246788999999999999999874 776432 1 23 34567776
Q ss_pred CCchhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610 374 KSDLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF 425 (430)
Q Consensus 374 ~~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~ 425 (430)
+ .+. ++.+.|.++||.+.++ .+++|||++ +.+|+++++++|+++
T Consensus 290 ~--~~~~~~~~~l~~~gi~v~~~---~~~iRis~~---~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 290 K--EEKERLLEHLRTKNVAVRSF---REGVRITIG---KREENDMILRELEVF 334 (335)
T ss_dssp T--HHHHHHHHHHHHHTEEEEEE---TTEEEEECC---CHHHHHHHHHHHHCC
T ss_pred C--CCHHHHHHHHHHCCEEEEEC---CCeEEEEeC---CHHHHHHHHHHHHhh
Confidence 4 233 6888998899998762 357999986 578999999999764
No 115
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.92 E-value=1.5e-23 Score=207.54 Aligned_cols=322 Identities=11% Similarity=0.017 Sum_probs=214.7
Q ss_pred CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH
Q 043610 70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA 149 (430)
Q Consensus 70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~ 149 (430)
.+++++.|...+++ +++++.+.+... .+++ ....+++++.+++++|.+ +++++ +|||+|++.
T Consensus 7 ~~~~l~~~~~~~~~-~~~~~~~~~~~~-----------~~~~--~~~~~~l~~~la~~~~~~---~~~~~-~~gt~a~~~ 68 (374)
T 3uwc_A 7 PYSYLERQFADIEP-YLNDLREFIKTA-----------DFTL--GAELEKFEKRFAALHNAP---HAIGV-GTGTDALAM 68 (374)
T ss_dssp CSCCHHHHTSSCHH-HHHHHHHHHHHT-----------CCSS--CHHHHHHHHHHHHHTTCS---EEEEE-SCHHHHHHH
T ss_pred eeeccccCCCCchH-HHHHHHHHHHcC-----------Cccc--ChhHHHHHHHHHHHhCCC---cEEEe-CCHHHHHHH
Confidence 35677777767777 888888776531 1111 134568899999999986 56665 788999999
Q ss_pred HHhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccC
Q 043610 150 VPLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEF 225 (430)
Q Consensus 150 ~~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~ 225 (430)
++.++ +++||+|++....+.+.. ..++..| +++.++... +..+|+++++ +++++++|+ ++|+||.+.
T Consensus 69 ~~~~~~~~~gd~v~~~~~~~~~~~--~~~~~~g~~~~~~~~~~----~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~ 139 (374)
T 3uwc_A 69 SFKMLNIGAGDEVITCANTFIASV--GAIVQAGATPVLVDSEN----GYVIDPEKIEAAITDKTKAIM---PVHYTGNIA 139 (374)
T ss_dssp HHHHTTCCTTCEEEEESSSCHHHH--HHHHHTTCEEEEECBCT----TSSBCGGGTGGGCCTTEEEEC---CBCGGGCCC
T ss_pred HHHHcCCCCCCEEEECCCccHHHH--HHHHHcCCEEEEEecCC----CCCcCHHHHHHhCCCCceEEE---EeCCcCCcC
Confidence 99999 899999998887776643 3456677 777777642 2247888887 678888877 667999999
Q ss_pred C--CCccc-cCCCcEEEEeccCcCCCCcccccc----ccEEEeCCC--ccccCCc-cEEEEEcH-HHHhccCCCCCcccc
Q 043610 226 K--EYPSA-KNSTGILVADMSSNFCSKPVDVTR----FGVIYAGAQ--KNVGPSG-VTIVIVRK-DLLGNAQDKTPLMLD 294 (430)
Q Consensus 226 p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~----~d~~~~s~~--K~~gp~G-~g~l~v~~-~~~~~~~~~~p~~~~ 294 (430)
| +|.++ +++|+++++|++|+.|.. ++... .|+++.|+| |++|+.| .|+++.++ ++.+.+.......
T Consensus 140 ~~~~i~~~~~~~~~~li~D~~~~~g~~-~~~~~~~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~-- 216 (374)
T 3uwc_A 140 DMPALAKIAKKHNLHIVEDACQTILGR-INDKFVGSWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHG-- 216 (374)
T ss_dssp CHHHHHHHHHHTTCEEEEECTTCTTCE-ETTEETTSSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTT--
T ss_pred CHHHHHHHHHHcCCEEEEeCCCccCce-eCCeeccccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcC--
Confidence 9 78886 689999999999998865 33222 278888977 9998644 57777654 4544432111000
Q ss_pred ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCC-ceecCCCCCCCccc--eEEEE
Q 043610 295 YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNG-FYKCPVEKSVRSFM--NVPFT 371 (430)
Q Consensus 295 ~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G-~~~~~~~~~~rs~~--iv~f~ 371 (430)
....... .. .+.+. .+..+..++.... ..+++++.++.+++++++++.|.+..+ +.+.. .+...... .+.+.
T Consensus 217 ~~~~~~~-~~-~~~~~-~~~~~~aa~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~ 291 (374)
T 3uwc_A 217 LINRDVC-VE-YGINC-RMDTIQAVIANRL-MNQLETITEKRRGIAHLYDQSFVDLSEFIDVPV-RREGVYHVFHIYVLR 291 (374)
T ss_dssp EEETTEE-SS-CCCBC-BCCHHHHHHHHHH-GGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCC-CCTTEECCCSSEEEE
T ss_pred ccccCcc-cc-ccccC-CCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCCeEEecc-CCCCCceeeEEEEEE
Confidence 0000000 00 11111 1122333333332 346788999999999999999997555 66542 22222221 23333
Q ss_pred cCCCchhHHHHHHHHHcCCeecCCCC-------------------------CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610 372 LEKSDLEAEFVKEAAKEKMVQLKGHR-------------------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 372 ~~~~~~~~~~~~~L~~~Gi~~~~g~~-------------------------~~g~iRis~~~~~t~edv~~ll~~L~~~~ 426 (430)
.+ ...++.+.|.++||.+.+++. ..+.+|++++.++|++||++++++|++++
T Consensus 292 ~~---~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 368 (374)
T 3uwc_A 292 VK---YRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFY 368 (374)
T ss_dssp ET---THHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHH
T ss_pred cC---CHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 32 123789999999998766540 01479999999999999999999999998
Q ss_pred Hhh
Q 043610 427 AKH 429 (430)
Q Consensus 427 ~~~ 429 (430)
+++
T Consensus 369 ~~~ 371 (374)
T 3uwc_A 369 LEK 371 (374)
T ss_dssp HTT
T ss_pred Hhh
Confidence 754
No 116
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.91 E-value=3.9e-23 Score=213.72 Aligned_cols=302 Identities=12% Similarity=0.030 Sum_probs=202.7
Q ss_pred cHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCcHHHHHHHHHhhcCC--------CC-----C-cEEEEeCChhHHHH
Q 043610 110 GKEFKSIIEKAESDLRALLNIP--QEYSVLFLQGGATTQFAAVPLNLCT--------PN-----D-PVDYIVTGSWGDKA 173 (430)
Q Consensus 110 ~~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~gaT~a~~~~~~sl~~--------~g-----d-~vl~~~~g~~~~~~ 173 (430)
++...++.+++++.+++++|.+ .+ +++++ +|+|+++..++..+.. +| + .|++....+++..
T Consensus 127 ~~~~~~le~~~~~~la~~~g~~~~~~-~~~~t-~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~- 203 (504)
T 2okj_A 127 APVFVLMEQITLKKMREIVGWSSKDG-DGIFS-PGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIK- 203 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCSSSC-EEEEE-SSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH-
T ss_pred ChHHHHHHHHHHHHHHHHhCCCCCCC-CEEEe-CCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHH-
Confidence 4566677778889999999998 44 66665 7899999988777631 46 5 4554445666532
Q ss_pred HHHHHHhC----CceEEecCCCCcCCCCCCccccc--cCC------CccEEEEeecCCCccccCC--CCccc-cCCCcEE
Q 043610 174 FKEAQKFC----NPQVIWSGKAEKYTKIPNFDALE--QNP------DAKYLHICANETIHGVEFK--EYPSA-KNSTGIL 238 (430)
Q Consensus 174 ~~~a~~~g----~~~~v~~~~~~~~g~~~d~~~l~--i~~------~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~l 238 (430)
+.++..| +++.++..+ .+ .+|+++|+ +++ ++++|++++++|+||.+.| +|.++ +++|+++
T Consensus 204 -~~~~~~g~g~~~v~~v~~~~---~~-~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~l 278 (504)
T 2okj_A 204 -KAGAALGFGTDNVILIKCNE---RG-KIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWL 278 (504)
T ss_dssp -HHHHHTTSCGGGEEEECBCT---TS-CBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEE
T ss_pred -HHHHHcCCCcccEEEEecCC---CC-CCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEE
Confidence 2333333 455666532 23 57888887 544 5899999999999999999 78886 6899999
Q ss_pred EEeccCcCCCCc-----ccc---ccccEEEeCCCcccc-CCccEEEEEcHH-HHhccCCCCCccc-c----------ccc
Q 043610 239 VADMSSNFCSKP-----VDV---TRFGVIYAGAQKNVG-PSGVTIVIVRKD-LLGNAQDKTPLML-D----------YKI 297 (430)
Q Consensus 239 vvD~a~s~G~~~-----idl---~~~d~~~~s~~K~~g-p~G~g~l~v~~~-~~~~~~~~~p~~~-~----------~~~ 297 (430)
+||++++.+... .++ ...|++++++|||+| |.|+|+++++++ +++......+.|+ + +..
T Consensus 279 hvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 358 (504)
T 2okj_A 279 HVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGD 358 (504)
T ss_dssp EEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGG
T ss_pred EEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCccc
Confidence 999999877653 233 345899999999996 999999999874 5553211122222 1 100
Q ss_pred h-hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc
Q 043610 298 H-DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD 376 (430)
Q Consensus 298 ~-~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~ 376 (430)
. .+.+.+. ....++++..++ .. .|++++.++..++++++++.|++..|++++...++ ...+++|.+.+..
T Consensus 359 ~~~~~~rr~---~~l~~~a~l~~l---g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p--~~~~v~f~~~~~~ 429 (504)
T 2okj_A 359 KAIQCGRHV---DIFKFWLMWKAK---GT-VGFENQINKCLELAEYLYAKIKNREEFEMVFNGEP--EHTNVCFWYIPQS 429 (504)
T ss_dssp GSSCSSCBC---CHHHHHHHHHHH---HH-HHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCC--SSSCEEEEECCGG
T ss_pred CCCCCCCCc---cHHHHHHHHHHh---hH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCC--CeEEEEEEEeCcc
Confidence 0 0111111 233444443333 32 37899999999999999999997668988631112 2346778753211
Q ss_pred ----------------hhHHHHHHHHHcCCeecCCC--CC-CCeeEEeec-CCCCHHHHHHHHHHHHHHHHh
Q 043610 377 ----------------LEAEFVKEAAKEKMVQLKGH--RS-VGGMRASIY-NAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 377 ----------------~~~~~~~~L~~~Gi~~~~g~--~~-~g~iRis~~-~~~t~edv~~ll~~L~~~~~~ 428 (430)
...++.++|.++|++...+. .. .+.+||+++ .+++++||+++++.|++++++
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 501 (504)
T 2okj_A 430 LRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQD 501 (504)
T ss_dssp GSSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 02257888888896543211 11 247999997 789999999999999998753
No 117
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.91 E-value=2.4e-23 Score=207.80 Aligned_cols=328 Identities=9% Similarity=0.008 Sum_probs=212.6
Q ss_pred CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610 69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA 148 (430)
Q Consensus 69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~ 148 (430)
++++++..|...+++.+++++.+.+...+ .. .......++|+.+++++|.+ +++++ +|||+|++
T Consensus 22 ~~~~~l~~~~p~~~~~~~~a~~~~~~~~~---------~~---~~~~~~~~l~~~la~~~~~~---~~i~~-~~gt~al~ 85 (391)
T 3dr4_A 22 SDLPRISVAAPRLDGNERDYVLECMDTTW---------IS---SVGRFIVEFEKAFADYCGVK---HAIAC-NNGTTALH 85 (391)
T ss_dssp ------CCCCCCCCSSHHHHHHHHHHHTC---------CS---SCSHHHHHHHHHHHHHHTCS---EEEEE-SSHHHHHH
T ss_pred CCCceeccCCCCCCHHHHHHHHHHHHcCC---------cc---CCChHHHHHHHHHHHHhCCC---cEEEe-CCHHHHHH
Confidence 45777888887888999999988775311 01 01134568999999999987 56665 78899999
Q ss_pred HHHhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcccc
Q 043610 149 AVPLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVE 224 (430)
Q Consensus 149 ~~~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~ 224 (430)
.++.++ +++||+|++...++.+.. ..++..| +++.++... .+..+|+++++ +++++++|++ +|+||..
T Consensus 86 ~~l~~~~~~~gd~vl~~~~~~~~~~--~~~~~~g~~~~~~~~~~---~~~~~d~~~l~~~~~~~~~~v~~---~n~tG~~ 157 (391)
T 3dr4_A 86 LALVAMGIGPGDEVIVPSLTYIASA--NSVTYCGATPVLVDNDP---RTFNLDAAKLEALITPRTKAIMP---VHLYGQI 157 (391)
T ss_dssp HHHHHHTCCTTCEEEEESSSCTHHH--HHHHHTTCEEEEECBCT---TTCSBCGGGSGGGCCTTEEEECC---BCGGGCC
T ss_pred HHHHHcCCCCcCEEEECCCchHHHH--HHHHHCCCEEEEEecCc---cccCcCHHHHHHhcCCCceEEEE---ECCCCCh
Confidence 999999 899999998887777653 3455677 777777653 12247888887 6788888874 4699999
Q ss_pred CC--CCccc-cCCCcEEEEeccCcCCCCccc--cccc-cE--EEeCCCccccCCccEEEEEcH-HHHhccCCCCCccccc
Q 043610 225 FK--EYPSA-KNSTGILVADMSSNFCSKPVD--VTRF-GV--IYAGAQKNVGPSGVTIVIVRK-DLLGNAQDKTPLMLDY 295 (430)
Q Consensus 225 ~p--ei~~~-~~~g~~lvvD~a~s~G~~~id--l~~~-d~--~~~s~~K~~gp~G~g~l~v~~-~~~~~~~~~~p~~~~~ 295 (430)
.| +|.++ +++|+++++|++|+.|....+ ...+ |+ +.++.||++++...|+++.++ ++.+.+..... ...
T Consensus 158 ~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~~~~~~~--~g~ 235 (391)
T 3dr4_A 158 CDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRG--QGM 235 (391)
T ss_dssp CCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHHB--TTC
T ss_pred hhHHHHHHHHHHcCCEEEEECcccccceECCeeecccCCEEEEECCCCCcCCcCCeEEEEECCHHHHHHHHHHHh--cCC
Confidence 98 78886 689999999999998876433 2222 44 445578999642247777654 45444321000 000
Q ss_pred cc-hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC--CC-CCCccceEEEE
Q 043610 296 KI-HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV--EK-SVRSFMNVPFT 371 (430)
Q Consensus 296 ~~-~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~--~~-~~rs~~iv~f~ 371 (430)
.. ........+... .+..+.+++.+.. ..+++++.++.+++++++++.|.+. |+.+... .. ......++.+.
T Consensus 236 ~~~~~~~~~~~g~~~--~~~~l~aa~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~i~ 311 (391)
T 3dr4_A 236 DPNRRYWFPIVGFNY--RMTNIQAAIGLAQ-LERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRHVFWMYTVR 311 (391)
T ss_dssp CTTSTTCCSSCCCBC--BCCHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCCCSSEEEE
T ss_pred CCCCccccccccccc--CCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCcceeEEEEEE
Confidence 00 000000001000 1112222333222 2368889999999999999999985 8776542 11 12233345666
Q ss_pred cCCC-chhH-HHHHHHHHcCCeecCCCC----------------------CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610 372 LEKS-DLEA-EFVKEAAKEKMVQLKGHR----------------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 372 ~~~~-~~~~-~~~~~L~~~Gi~~~~g~~----------------------~~g~iRis~~~~~t~edv~~ll~~L~~~~ 426 (430)
+++. +.+. ++.+.|.++||.+.++.. ..+.+|++++.++|++||++++++|++++
T Consensus 312 ~~~~~~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 312 LGEGLSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp ECSSCSSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred ECCccchhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 6641 2233 799999999998766531 02369999999999999999999998754
No 118
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.91 E-value=1.4e-22 Score=207.97 Aligned_cols=328 Identities=12% Similarity=0.015 Sum_probs=217.4
Q ss_pred CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc----C
Q 043610 80 NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL----C 155 (430)
Q Consensus 80 ~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl----~ 155 (430)
...+.+++++.+.+.. ..++.....++.+.++++++++.+++++|.+. . +++++|+++++..++..+ .
T Consensus 77 ~~~p~v~~~~~~~~~~-----~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~--~-~~~~~ggt~a~~~al~~~~~~~~ 148 (474)
T 1wyu_B 77 KYNPKLHEEAARLFAD-----LHPYQDPRTAQGALRLMWELGEYLKALTGMDA--I-TLEPAAGAHGELTGILIIRAYHE 148 (474)
T ss_dssp CCCCHHHHHHHHTTSS-----CCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE--E-ECCCSSHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHh-----cCCCCchhhChHHHHHHHHHHHHHHHHHCCCc--e-eecChHHHHHHHHHHHHHHHHHH
Confidence 3445677777665321 11211111357778899999999999999974 3 445689999998754443 2
Q ss_pred CCCC-----cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcccc-CC
Q 043610 156 TPND-----PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVE-FK 226 (430)
Q Consensus 156 ~~gd-----~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~-~p 226 (430)
++|| +|++..+.|.+.. ..++..| +++.++..+ .+ .+|+++|+ +++++++|+++++ |++|.+ .+
T Consensus 149 ~~Gd~~~r~~Vlv~~~~h~~~~--~~~~~~G~~vv~v~~~~---~~-~~d~~~L~~~i~~~t~~v~~~~p-n~~G~~~~~ 221 (474)
T 1wyu_B 149 DRGEGRTRRVVLVPDSAHGSNP--ATASMAGYQVREIPSGP---EG-EVDLEALKRELGPHVAALMLTNP-NTLGLFERR 221 (474)
T ss_dssp HTTCTTTCCEEEEETTSCTHHH--HHHHHTTCEEEEECBCT---TS-SBCHHHHHHHCSTTEEEEEECSS-CTTSCCCTT
T ss_pred hcCCccCCCEEEEeCCcChhhH--HHHHHCCCEEEEecCCC---CC-CcCHHHHHHhhCCCceEEEEECC-CCCcccCCC
Confidence 4777 8887665554432 3455667 887787642 23 57888887 7889999999986 579998 46
Q ss_pred --CCccc-cCCCcEEEEeccCcCCCC-cccccc--ccEEEeCCCcccc-CC-----ccEEEEEcHHHHhccCCC------
Q 043610 227 --EYPSA-KNSTGILVADMSSNFCSK-PVDVTR--FGVIYAGAQKNVG-PS-----GVTIVIVRKDLLGNAQDK------ 288 (430)
Q Consensus 227 --ei~~~-~~~g~~lvvD~a~s~G~~-~idl~~--~d~~~~s~~K~~g-p~-----G~g~l~v~~~~~~~~~~~------ 288 (430)
+|.++ +++|+++++|++|+.+.. .++..+ .|++++|+||+++ |. |+|++++++++++.+...
T Consensus 222 l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g 301 (474)
T 1wyu_B 222 ILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGE 301 (474)
T ss_dssp HHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECS
T ss_pred HHHHHHHHHHcCCEEEEeCchhhhhccCCCcccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccC
Confidence 67776 688999999999975554 333333 3799999999996 64 599999999887765310
Q ss_pred CCccccccchhh-cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccce
Q 043610 289 TPLMLDYKIHDE-NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN 367 (430)
Q Consensus 289 ~p~~~~~~~~~~-~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~i 367 (430)
..+++++..... .....++.+...+.++..+++.+.. .+++++.++..++++++++.|.+ .|+++.. ... ... .
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~-~~l~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~~-~~~-~ 376 (474)
T 1wyu_B 302 EGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGL-EGLKKAAALAVLNARYLKELLKE-KGYRVPY-DGP-SMH-E 376 (474)
T ss_dssp SCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-TTCBCSS-CSS-CCS-C
T ss_pred CeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhh-cCcEecC-CCC-cce-E
Confidence 011122110000 0112235666666666666654432 36788899999999999999997 4887632 111 111 1
Q ss_pred EEEEcCCCchhHHHHHHHHHcCCeecC-CCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610 368 VPFTLEKSDLEAEFVKEAAKEKMVQLK-GHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 368 v~f~~~~~~~~~~~~~~L~~~Gi~~~~-g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~ 427 (430)
+.+.++......++.++|.++||.... ... ..+.+||++..+++++|+++++++|+++++
T Consensus 377 ~~~~~~~~~~~~~l~~~L~~~Gi~~~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~ 439 (474)
T 1wyu_B 377 FVAQPPEGFRALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLK 439 (474)
T ss_dssp EEEBCSTTCCHHHHHHHHHHTTCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHT
T ss_pred EEEEcCCCCCHHHHHHHHHHCCccccccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHH
Confidence 233443211233799999999997421 111 245799999999999999999999998865
No 119
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.91 E-value=1.5e-23 Score=207.91 Aligned_cols=322 Identities=13% Similarity=0.030 Sum_probs=208.0
Q ss_pred ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHH
Q 043610 71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAV 150 (430)
Q Consensus 71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~ 150 (430)
.++++.++.++++.+++++.+.+...+ ...+ ...+++|+.+++++|.+ +++++ +|||+|++.+
T Consensus 5 ~~~l~~~~~~~~~~~~~a~~~~~~~~~---------~~~~----~~~~~l~~~la~~~~~~---~~i~~-~sgt~al~~~ 67 (373)
T 3frk_A 5 FASFKPMHDEIEYEIKFKFEEIYKRNW---------FILG----DEDKKFEQEFADYCNVN---YCIGC-GNGLDALHLI 67 (373)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHTC---------CSSS----HHHHHHHHHHHHHHTSS---EEEEE-SCHHHHHHHH
T ss_pred ccCCCcccCCCCHHHHHHHHHHHHCCC---------ccCC----chHHHHHHHHHHHhCCC---eEEEe-CCHHHHHHHH
Confidence 344555555677888888888765311 0111 34668999999999986 56775 7899999999
Q ss_pred Hhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC
Q 043610 151 PLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK 226 (430)
Q Consensus 151 ~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p 226 (430)
+.++ +++||+|++....+.+.. ..++..| +++.++..+ .+..+|+++++ +++++++|+ ++|+||...|
T Consensus 68 l~~l~~~~gd~Vi~~~~~~~~~~--~~~~~~g~~~~~~~~~~---~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~ 139 (373)
T 3frk_A 68 LKGYDIGFGDEVIVPSNTFIATA--LAVSYTGAKPIFVEPDI---RTYNIDPSLIESAITEKTKAII---AVHLYGQPAD 139 (373)
T ss_dssp HHHTTCCTTCEEEEETTSCTHHH--HHHHHHSCEEEEECEET---TTTEECGGGTGGGCCTTEEEEE---EECCTTCCCC
T ss_pred HHHcCCCCcCEEEECCCCcHHHH--HHHHHcCCEEEEEeccc---cccCcCHHHHHHhcCCCCeEEE---EECCCcCccc
Confidence 9999 899999998887777643 3455668 777777642 12246888887 778898888 4468999998
Q ss_pred --CCccc-cCCCcEEEEeccCcCCCCcccccc----ccEEEeC--CCccccCCc-cEEEEEc-HHHHhccCCCCCccccc
Q 043610 227 --EYPSA-KNSTGILVADMSSNFCSKPVDVTR----FGVIYAG--AQKNVGPSG-VTIVIVR-KDLLGNAQDKTPLMLDY 295 (430)
Q Consensus 227 --ei~~~-~~~g~~lvvD~a~s~G~~~idl~~----~d~~~~s--~~K~~gp~G-~g~l~v~-~~~~~~~~~~~p~~~~~ 295 (430)
+|.++ +++|+++++|++|++|.. ++... .|++++| .||++|+.| .|+++.+ +++.+.+...... ..
T Consensus 140 l~~i~~l~~~~~~~li~D~a~~~g~~-~~~~~~~~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~--g~ 216 (373)
T 3frk_A 140 MDEIKRIAKKYNLKLIEDAAQAHGSL-YKGMKVGSLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNY--GS 216 (373)
T ss_dssp HHHHHHHHHHHTCEEEEECTTCTTCE-ETTEETTSSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBT--TC
T ss_pred HHHHHHHHHHcCCEEEEECCcccCCE-ECCEeccccccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhc--Cc
Confidence 78886 688999999999998876 44333 2677777 669998644 5667765 4454443210000 00
Q ss_pred cchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCcc--ceEEEEcC
Q 043610 296 KIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF--MNVPFTLE 373 (430)
Q Consensus 296 ~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~--~iv~f~~~ 373 (430)
.. .......|... .+..+.+++.... ..+++++.++.+++++++++.|.+ .++.+.. .+..... ..+.+..+
T Consensus 217 ~~-~~~~~~~g~~~--~~~~~~aa~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 290 (373)
T 3frk_A 217 EK-KYHHIYKGFNS--RLDELQAGFLRVK-LKYLDKWNEERRKIAQKYIAGINN-PNVIIPV-EADYAKHVWYTFVIRSE 290 (373)
T ss_dssp SB-TTBCCSCCCBC--CCCHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHCCC-TTEECCC-CCTTEECCCSSEEEEES
T ss_pred cc-CCccccccccC--CCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcc-CceEecc-CCCCCceeeEEEEEEeC
Confidence 00 00000111100 1112222333222 236788999999999999999986 4555432 2211111 22333332
Q ss_pred CCchhHHHHHHHHHcCCeecCCCC-----------------C--------CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 374 KSDLEAEFVKEAAKEKMVQLKGHR-----------------S--------VGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 374 ~~~~~~~~~~~L~~~Gi~~~~g~~-----------------~--------~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
...++.+.|.++||.+..++. . .+.+|++++.++|++||++++++|++...+
T Consensus 291 ---~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~ 367 (373)
T 3frk_A 291 ---KRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLE 367 (373)
T ss_dssp ---SHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred ---CHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence 123789999999998764330 0 146999999999999999999999987665
Q ss_pred h
Q 043610 429 H 429 (430)
Q Consensus 429 ~ 429 (430)
|
T Consensus 368 ~ 368 (373)
T 3frk_A 368 H 368 (373)
T ss_dssp -
T ss_pred h
Confidence 4
No 120
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.91 E-value=1e-23 Score=206.80 Aligned_cols=309 Identities=12% Similarity=0.055 Sum_probs=204.8
Q ss_pred CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC
Q 043610 77 GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT 156 (430)
Q Consensus 77 gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~ 156 (430)
.+.+.++.|++++.+.+.. . ...++ .....+++++.+++++| ++ .+++++ +|+|+++..++..+.+
T Consensus 16 ~~~~~~~~v~~a~~~~~~~-----~----~~~~~--~~~~~~~l~~~la~~~g-~~-~~v~~~-~~gt~a~~~al~~~~~ 81 (356)
T 1v72_A 16 NIAGASPEVAQALVKHSSG-----Q----AGPYG--TDELTAQVKRKFCEIFE-RD-VEVFLV-PTGTAANALCLSAMTP 81 (356)
T ss_dssp GGCCCCHHHHHHHHHTTSS-----C----CCSTT--CSHHHHHHHHHHHHHHT-SC-CEEEEE-SCHHHHHHHHHHTSCC
T ss_pred CccCCCHHHHHHHHhhccC-----c----ccccc--cchHHHHHHHHHHHHhC-CC-CcEEEe-CCccHHHHHHHHHhcC
Confidence 3456789999999886521 0 01111 12446789999999999 43 267765 7899999999999888
Q ss_pred CCCcEEEEeCChhHHHHHHHHHHh--C-CceEEecCCCCcCCCCCCccccc---cCC-------CccEEEEeecCCCccc
Q 043610 157 PNDPVDYIVTGSWGDKAFKEAQKF--C-NPQVIWSGKAEKYTKIPNFDALE---QNP-------DAKYLHICANETIHGV 223 (430)
Q Consensus 157 ~gd~vl~~~~g~~~~~~~~~a~~~--g-~~~~v~~~~~~~~g~~~d~~~l~---i~~-------~~~lv~i~~~~t~tG~ 223 (430)
+||+|++..+.+++......+... | +++.++.. .+ .+|+++++ +++ ++++|+++++++ ||.
T Consensus 82 ~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----~~-~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~ 155 (356)
T 1v72_A 82 PWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP----AA-KLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGS 155 (356)
T ss_dssp TTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG----GG-CCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSC
T ss_pred CCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC----CC-eEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCc
Confidence 999988766555543211013445 7 66656542 22 46777663 333 689999999765 999
Q ss_pred cCC-----CCccc-cCCCcEEEEeccCcCC------CCcccc---ccccEEEeCCCccccCCccEEEEEcHHHHhccCCC
Q 043610 224 EFK-----EYPSA-KNSTGILVADMSSNFC------SKPVDV---TRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDK 288 (430)
Q Consensus 224 ~~p-----ei~~~-~~~g~~lvvD~a~s~G------~~~idl---~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~ 288 (430)
+++ +|.++ +++|+++++|+++..+ ..+..+ ...|+++.|+||+.+|.|+|+++.++++++.+..
T Consensus 156 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~g~~~G~g~~~~~~~~~~~~~~- 234 (356)
T 1v72_A 156 IYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLAAEAIVLFNTSLATEMSY- 234 (356)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGGTCSSCEEEEESSGGGHHHHHH-
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccCCCcCccEEEEECHHHHhhHHH-
Confidence 887 35554 5899999999998632 122122 1457888999999448888899999888765421
Q ss_pred CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceE
Q 043610 289 TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV 368 (430)
Q Consensus 289 ~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv 368 (430)
... .. ++.+.....++..+++.+. ...++...++..++++++++.|.+..|+++.. + ..+. .+
T Consensus 235 ---~~~-----~~----~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~-~~~~-~~ 297 (356)
T 1v72_A 235 ---RRK-----RA----GHLSSKMRFLSAQIDAYLT-DDLWLRNARKANAAAQRLAQGLEGLGGVEVLG--G-TEAN-IL 297 (356)
T ss_dssp ---HHH-----HT----TCCCSSTHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEES--C-CCSS-EE
T ss_pred ---Hhh-----cc----CchhhhHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHhhCCCcEEcc--C-CCcc-EE
Confidence 000 01 1111112233334455443 23356678888999999999998756887652 2 1232 34
Q ss_pred EEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 369 PFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 369 ~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
.+.++ .++.++|.++||.+.+|....+.+||+++.+++++|++++++.|++++++
T Consensus 298 ~~~~~-----~~~~~~l~~~gi~v~~g~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~ 352 (356)
T 1v72_A 298 FCRLD-----SAMIDALLKAGFGFYHDRWGPNVVRFVTSFATTAEDVDHLLNQVRLAADR 352 (356)
T ss_dssp EEEEC-----HHHHHHHHHTTCBCBCSSSSTTEEEEECCTTCCHHHHHHHHHHHHHTC--
T ss_pred EEEcC-----HHHHHHHHhcCeEEeccccCCCeEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 45554 26888998999998866422468999999899999999999999987654
No 121
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.91 E-value=1.4e-22 Score=201.97 Aligned_cols=318 Identities=11% Similarity=0.029 Sum_probs=211.6
Q ss_pred CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCCCC
Q 043610 81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTPND 159 (430)
Q Consensus 81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~gd 159 (430)
+++.+++++.+.+.. +. .++.. ....+++|+.+++++|.+. . ++++ +||++++.++.++ +++||
T Consensus 15 ~~~~~~~a~~~~l~~----~~----~~~~~---~~~~~~l~~~la~~~~~~~--~-i~~~-sGt~al~~~l~~l~~~~gd 79 (388)
T 1b9h_A 15 YDDAERNGLVRALEQ----GQ----WWRMG---GDEVNSFEREFAAHHGAAH--A-LAVT-NGTHALELALQVMGVGPGT 79 (388)
T ss_dssp CCHHHHHHHHHHHHT----SC----CBTTT---CSHHHHHHHHHHHHTTCSE--E-EEES-CHHHHHHHHHHHTTCCTTC
T ss_pred CCHHHHHHHHHHHHc----CC----eeecC---CHHHHHHHHHHHHHhCCCe--E-EEeC-CHHHHHHHHHHHcCCCCcC
Confidence 458999999988753 11 01111 1345689999999999862 4 4554 4699999999998 88999
Q ss_pred cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cC
Q 043610 160 PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KN 233 (430)
Q Consensus 160 ~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~ 233 (430)
+|++...++.+.. ..++..| +++.++..++ +..+|+++++ +++++++|+ ++|+||.+.| +|.++ ++
T Consensus 80 ~Vi~~~~~~~~~~--~~~~~~g~~~~~v~~~~~---~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~la~~ 151 (388)
T 1b9h_A 80 EVIVPAFTFISSS--QAAQRLGAVTVPVDVDAA---TYNLDPEAVAAAVTPRTKVIM---PVHMAGLMADMDALAKISAD 151 (388)
T ss_dssp EEEEESSSCTHHH--HHHHHTTCEEEEECBCTT---TCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHH
T ss_pred EEEECCCccHHHH--HHHHHcCCEEEEEecCCC---cCCCCHHHHHHhcCcCceEEE---EeCCccCcCCHHHHHHHHHH
Confidence 9998887777653 3456678 7777776431 1247888887 788888877 6788999999 78886 68
Q ss_pred CCcEEEEeccCcCCCCc--cccccc---cEEEeCCCcccc-CCccEEEEEcHH-H--HhccCCCCCccccccchhhcCCC
Q 043610 234 STGILVADMSSNFCSKP--VDVTRF---GVIYAGAQKNVG-PSGVTIVIVRKD-L--LGNAQDKTPLMLDYKIHDENNSL 304 (430)
Q Consensus 234 ~g~~lvvD~a~s~G~~~--idl~~~---d~~~~s~~K~~g-p~G~g~l~v~~~-~--~~~~~~~~p~~~~~~~~~~~~~~ 304 (430)
+|+++++|++|+.|..+ .++..+ ++..+|.||+++ +. .|+++.+++ + ++.+...................
T Consensus 152 ~~~~li~D~a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (388)
T 1b9h_A 152 TGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGE-GGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKI 230 (388)
T ss_dssp HTCCBCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSS-CEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCS
T ss_pred cCCEEEEecchhcCCccCCeecccccceEEEEccCCCcccCCC-eEEEEECCHHHHHHHHHHHHHhCCCCccCccceeec
Confidence 89999999999988754 445444 355566779995 54 588888875 4 44331100000000000000011
Q ss_pred CCC---ccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC--CCccceEEEEcCCCc-hh
Q 043610 305 YNT---PPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS--VRSFMNVPFTLEKSD-LE 378 (430)
Q Consensus 305 ~~T---~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~--~rs~~iv~f~~~~~~-~~ 378 (430)
.|+ ++....+++..+++ .+++..++.+++++++.+.|.+..|+.+....+. ......+.|.+++.. .+
T Consensus 231 ~g~~~~~~~~~~a~~~~~~~------~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (388)
T 1b9h_A 231 AGSNMRLNEFSASVLRAQLA------RLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEER 304 (388)
T ss_dssp CCCBCBCBHHHHHHHHHHHT------THHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHH
T ss_pred ccccCCcCHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcCccc
Confidence 233 45444433333332 4567788888899999999997558877542111 123456778887521 13
Q ss_pred H-HHHHHHHHcCCeecCCCCC-------------------------------CCeeEEeecCCC-CHHHHHHHHHHHHHH
Q 043610 379 A-EFVKEAAKEKMVQLKGHRS-------------------------------VGGMRASIYNAM-PLAGVEKLVAFMKDF 425 (430)
Q Consensus 379 ~-~~~~~L~~~Gi~~~~g~~~-------------------------------~g~iRis~~~~~-t~edv~~ll~~L~~~ 425 (430)
. ++.+.|.++||.+..++.. .+.||++++..+ |++||++++++|+++
T Consensus 305 ~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~ 384 (388)
T 1b9h_A 305 RNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADA 384 (388)
T ss_dssp HHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHH
Confidence 3 6999999999987544211 125999999999 999999999999998
Q ss_pred HHh
Q 043610 426 QAK 428 (430)
Q Consensus 426 ~~~ 428 (430)
+++
T Consensus 385 ~~~ 387 (388)
T 1b9h_A 385 VAR 387 (388)
T ss_dssp HHH
T ss_pred Hhh
Confidence 764
No 122
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.91 E-value=1.8e-23 Score=210.28 Aligned_cols=335 Identities=15% Similarity=0.117 Sum_probs=210.5
Q ss_pred CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHH-HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610 70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFK-SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA 148 (430)
Q Consensus 70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~ 148 (430)
+.+++.+++.++++.|++++.+.+.+..+.+... .....+.... ...+.+++.+++++|.+. +.++++||++|+.
T Consensus 33 ~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~~---~~v~~~~Gs~a~~ 108 (425)
T 3ecd_A 33 SQVELIASENIVSRAVLDAQGSVLTNKYAEGYPG-KRYYGGCEFADEVEALAIERVKRLFNAGH---ANVQPHSGAQANG 108 (425)
T ss_dssp HSEECCTTCCCCCHHHHHHHTSGGGSSCTTC-------------CCHHHHHHHHHHHHHHTCSE---EECCCSSHHHHHH
T ss_pred cceeeecccCCCCHHHHHHHhhhhhcccccCCCc-chhcCCChHHHHHHHHHHHHHHHHhCCCC---ceeecCchHHHHH
Confidence 4677888888889999999998875322222110 0111112221 233445688999999874 3333478999999
Q ss_pred HHHhhcCCCCCcEEEEeCChhHHHHHH-HHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEeecCCCccc
Q 043610 149 AVPLNLCTPNDPVDYIVTGSWGDKAFK-EAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHICANETIHGV 223 (430)
Q Consensus 149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~-~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~~~~t~tG~ 223 (430)
.++..++++||+|++..+.+.+..... .....| ....++...+ +.+..+|+++++ +. +++++|+++++++ |.
T Consensus 109 ~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--~~ 185 (425)
T 3ecd_A 109 AVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVS-RDTMLIDYDQVEALAQQHKPSLIIAGFSAY--PR 185 (425)
T ss_dssp HHHHHHCCTTCEEEEECC------------------CEEEEECCC-TTTSSCCHHHHHHHHHHHCCSEEEEECSCC--CS
T ss_pred HHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCC-cccCccCHHHHHHHHhhcCCcEEEEccccC--CC
Confidence 999999999999998877665521111 111234 4444433221 112247888887 54 6899999987666 55
Q ss_pred cCC--CCccc-cCCCcEEEEeccCcCCCC-----ccccccccEEEeCCCccc-cCCccEEEEEc-HHHHhccCCCCCccc
Q 043610 224 EFK--EYPSA-KNSTGILVADMSSNFCSK-----PVDVTRFGVIYAGAQKNV-GPSGVTIVIVR-KDLLGNAQDKTPLML 293 (430)
Q Consensus 224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~~-----~idl~~~d~~~~s~~K~~-gp~G~g~l~v~-~~~~~~~~~~~p~~~ 293 (430)
..+ +|.++ +++|+++++|++|+.|.. +-.+...|++++|+||++ ||.| |+++.+ +++.+.+...
T Consensus 186 ~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~-g~~~~~~~~~~~~~~~~----- 259 (425)
T 3ecd_A 186 KLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPRG-GFVLTNDEEIAKKINSA----- 259 (425)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCCCSC-EEEEESCHHHHHHHHHH-----
T ss_pred cCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCcccCCCCc-EEEEeCCHHHHHHHHhh-----
Confidence 666 67776 689999999999865532 222334689999999999 5876 999988 4555443210
Q ss_pred cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC
Q 043610 294 DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE 373 (430)
Q Consensus 294 ~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~ 373 (430)
......++++...+.++..++..+.+ .+++.+.++..++++++++.|.+ .|+.+.. +...+ ..+.+.++
T Consensus 260 ------~~~~~~~~~~~~~~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~~~~~-~~~~~~~~ 328 (425)
T 3ecd_A 260 ------VFPGLQGGPLMHVIAGKAVAFGEALT-DDFKTYIDRVLANAQALGDVLKA-GGVDLVT--GGTDN-HLLLVDLR 328 (425)
T ss_dssp ------HC-----CCCHHHHHHHHHHHHHHTS-HHHHHHHHHHHHHHHHHHHHHHH-TTCEEGG--GSCSS-SEEEEECG
T ss_pred ------hCccccCCccHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHh-CCCeecc--CCCCc-eEEEEEeC
Confidence 00112246677777777777765432 35788999999999999999997 7887763 11123 34556665
Q ss_pred CCchhH-HHHHHHHHcCCeec----CCCC----CCCeeEEeecCC----CCHHHHHHHHHHHHHHHHh
Q 043610 374 KSDLEA-EFVKEAAKEKMVQL----KGHR----SVGGMRASIYNA----MPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 374 ~~~~~~-~~~~~L~~~Gi~~~----~g~~----~~g~iRis~~~~----~t~edv~~ll~~L~~~~~~ 428 (430)
+.+.+. .+.+.|.++||.+. +|.. ..+++|+++... .+++|+++++++|+++++.
T Consensus 329 ~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~ 396 (425)
T 3ecd_A 329 PKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEA 396 (425)
T ss_dssp GGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhc
Confidence 322233 57778888999987 4421 124799995554 4599999999999998764
No 123
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.91 E-value=6.6e-23 Score=205.18 Aligned_cols=315 Identities=14% Similarity=0.060 Sum_probs=213.5
Q ss_pred CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCCC
Q 043610 80 NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTPN 158 (430)
Q Consensus 80 ~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~g 158 (430)
.+++++++++.+.+...+. ...+ ...+++|+.+++++|.+ +++++ +|+|++++.++.++ +++|
T Consensus 9 ~~~~~v~~a~~~~~~~~~~--------~~~g----~~~~~l~~~la~~~~~~---~v~~~-~ggt~al~~~~~~l~~~~g 72 (394)
T 1o69_A 9 HMGGNELKYIEEVFKSNYI--------APLG----EFVNRFEQSVKDYSKSE---NALAL-NSATAALHLALRVAGVKQD 72 (394)
T ss_dssp ---CCHHHHHHHHHHHTTT--------SCTT----HHHHHHHHHHHHHHCCS---EEEEE-SCHHHHHHHHHHHTTCCTT
T ss_pred CCCHHHHHHHHHHHHcCCc--------cCCC----hHHHHHHHHHHHHhCCC---cEEEe-CCHHHHHHHHHHHcCCCCC
Confidence 3556788888887753110 0011 34668999999999983 67775 78999999999998 8999
Q ss_pred CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC---CccEEEEeecCCCccccCC--CCcc
Q 043610 159 DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP---DAKYLHICANETIHGVEFK--EYPS 230 (430)
Q Consensus 159 d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~---~~~lv~i~~~~t~tG~~~p--ei~~ 230 (430)
|+|++..+.+.+.. ..++..| +++.++..+ .+ .+|+++++ +++ ++++|++++ ++|...+ +|.+
T Consensus 73 d~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~ 143 (394)
T 1o69_A 73 DIVLASSFTFIASV--APICYLKAKPVFIDCDE---TY-NIDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVE 143 (394)
T ss_dssp CEEEEESSSCGGGT--HHHHHTTCEEEEECBCT---TS-SBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHH
T ss_pred CEEEECCCccHHHH--HHHHHcCCEEEEEEeCC---CC-CcCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHH
Confidence 99998887776643 2344567 777777642 22 47888886 554 799999986 7898888 7888
Q ss_pred c-cCCCcEEEEeccCcCCCCcccc-----ccccEEEeCCCccccCCccEEEEEc-HHHHhccCCCCCcccc---ccchhh
Q 043610 231 A-KNSTGILVADMSSNFCSKPVDV-----TRFGVIYAGAQKNVGPSGVTIVIVR-KDLLGNAQDKTPLMLD---YKIHDE 300 (430)
Q Consensus 231 ~-~~~g~~lvvD~a~s~G~~~idl-----~~~d~~~~s~~K~~gp~G~g~l~v~-~~~~~~~~~~~p~~~~---~~~~~~ 300 (430)
+ +++|+++++|++|++|....+. ...|++.++.+|.+++.++|+++++ +++++.+......... +-....
T Consensus 144 l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 223 (394)
T 1o69_A 144 ICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLD 223 (394)
T ss_dssp HHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSS
T ss_pred HHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccccc
Confidence 6 6899999999999987654322 2356888888999987789999995 7877654321111100 000112
Q ss_pred cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCcc-ceEEEEcCCC----
Q 043610 301 NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF-MNVPFTLEKS---- 375 (430)
Q Consensus 301 ~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~-~iv~f~~~~~---- 375 (430)
.+..++|++....+++.. ++ .+++..++.+++++++++.|.+ . +++.+.....+.. .+++|.+++.
T Consensus 224 ~g~~~~~~~~~aa~~l~~-l~------~l~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 294 (394)
T 1o69_A 224 YGYNYRLSNVLGAIGVAQ-ME------VLEQRVLKKREIYEWYKEFLGE-Y-FSFLDELENSRSNRWLSTALINFDKNEL 294 (394)
T ss_dssp CCCBCBCCHHHHHHHHHH-HT------THHHHHHHHHHHHHHHHHHHTT-T-EECCCCCTTEECCCSSEEEEESCCGGGS
T ss_pred cCcccCcCHHHHHHHHHH-HH------HHHHHHHHHHHHHHHHHHHhcc-c-ccccCCCCCCcceeEEEEEEecchhhcc
Confidence 233445777766555442 43 3556788999999999999986 4 6655321111122 2466777632
Q ss_pred ----------------chhH-HHHHHHHHcCCeecCCCCC---------C-------------CeeEEeecCCCCHHHHH
Q 043610 376 ----------------DLEA-EFVKEAAKEKMVQLKGHRS---------V-------------GGMRASIYNAMPLAGVE 416 (430)
Q Consensus 376 ----------------~~~~-~~~~~L~~~Gi~~~~g~~~---------~-------------g~iRis~~~~~t~edv~ 416 (430)
+.+. ++.+.|.++||.+.+++.. . ..+|+..+.++|++||+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~ 374 (394)
T 1o69_A 295 NACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVY 374 (394)
T ss_dssp CCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHH
T ss_pred ccccccccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHH
Confidence 1234 6889999999987665210 0 34666778899999999
Q ss_pred HHHHHHHHHHHh
Q 043610 417 KLVAFMKDFQAK 428 (430)
Q Consensus 417 ~ll~~L~~~~~~ 428 (430)
+++++|++++.+
T Consensus 375 ~~~~~l~~~~~~ 386 (394)
T 1o69_A 375 EISKLILKSIKA 386 (394)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHHhc
Confidence 999999998764
No 124
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.91 E-value=8.2e-23 Score=199.15 Aligned_cols=273 Identities=10% Similarity=-0.047 Sum_probs=182.9
Q ss_pred HHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCcCC
Q 043610 119 KAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEKYT 195 (430)
Q Consensus 119 ~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~~g 195 (430)
++++.+++++|.+ +.+++ ++||++++.++.+++++||+|++....+.+.. +...++..| +++.++.
T Consensus 2 ~l~~~la~~~g~~---~~i~~-~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------- 70 (331)
T 1pff_A 2 ALEGKIAKLEHAE---ACAAT-ASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM------- 70 (331)
T ss_dssp HHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-------
T ss_pred hHHHHHHHHhCCC---eEEEe-CChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-------
Confidence 5789999999986 34555 45699999999998899999998877766542 111134567 5555542
Q ss_pred CCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cC-CCcEEEEeccCcCCCCccccc-cccEEEeCCCcccc
Q 043610 196 KIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KN-STGILVADMSSNFCSKPVDVT-RFGVIYAGAQKNVG 268 (430)
Q Consensus 196 ~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~-~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K~~g 268 (430)
.|+++++ +++++++|++++++|+||.+.| +|.++ ++ +|+++++|++|+.|....+++ ..|+++.|+||++|
T Consensus 71 --~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~ 148 (331)
T 1pff_A 71 --AVPGNIEKHLKPNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPLDLGVDIVVHSATKYIN 148 (331)
T ss_dssp --TSTTHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTS
T ss_pred --CCHHHHHHhhcCCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChhhcCCcEEEEECccccC
Confidence 3566776 6789999999999999999999 78886 68 999999999999876543342 23799999999996
Q ss_pred -CCc--cEEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 043610 269 -PSG--VTIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLY 344 (430)
Q Consensus 269 -p~G--~g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~ 344 (430)
|.| .|++++++ ++++.+.+....+ ..++++....+++..+++.+. ...++..+..+.+.
T Consensus 149 ~~~~r~~G~~~~~~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~ 211 (331)
T 1pff_A 149 GHTDVVAGLVCSRADIIAKVKSQGIKDI-----------TGAIISPHDAWLITRGTLTLD------MRVKRAAENAQKVA 211 (331)
T ss_dssp SSSSCCCEEEEECHHHHHHHHHTCCCCC-----------CCCCCCHHHHHHHHHHHHHHH------HHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEeCcHHHHHHHHHHHHhh-----------cCCCCCHHHHHHHHcCcchHH------HHHHHHHHHHHHHH
Confidence 655 79999998 8877654321100 113566666666666666432 12222233333333
Q ss_pred HHHHcc--------------CCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCC---C-----------
Q 043610 345 NVIDGS--------------NGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKG---H----------- 396 (430)
Q Consensus 345 ~~l~~~--------------~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g---~----------- 396 (430)
+.+++. .|+++..... .....+++|.+++ ..++.+.|.+.||.+... .
T Consensus 212 ~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~ 287 (331)
T 1pff_A 212 EFLHEHKAVKKVYYPGLPDHPGHEIAKKQM-KMFGSMIAFDVDG---LEKAKKVLDNCHVVSLAVSLGGPESLIQHPASM 287 (331)
T ss_dssp HHHHHCTTCCCEECTTSTTSTTHHHHHHHC-SSCCSEEEEECSS---HHHHHHHHHTCSSSEECSSCCSSSCEEECHHHH
T ss_pred HHHHcCCCeeEEECCCCCCCccHHHHHhhC-CCCceEEEEEECC---HHHHHHHHHhCCCceeccCCCCcceeeecchhh
Confidence 443321 1222221000 1123567788762 236777888899964221 1
Q ss_pred --------------CCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610 397 --------------RSVGGMRASIYNAMPLAGVEKLVAFMKDF 425 (430)
Q Consensus 397 --------------~~~g~iRis~~~~~t~edv~~ll~~L~~~ 425 (430)
...+.+|||++.+++++|+++++++|+++
T Consensus 288 ~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 288 THAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp TSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred cccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 01368999999999999999999999864
No 125
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.91 E-value=2.6e-22 Score=200.04 Aligned_cols=327 Identities=10% Similarity=0.053 Sum_probs=215.1
Q ss_pred CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH
Q 043610 70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA 149 (430)
Q Consensus 70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~ 149 (430)
+++.|+. |. +|+.+++++.+.+.+.+ ...+ ....++++.+++++|.+ +++++ +|+|+|++.
T Consensus 9 ~~i~~~~-p~-~~~~~~~a~~~~~~~~~---------~~~~----~~~~~l~~~la~~~~~~---~~~~~-~~gt~al~~ 69 (393)
T 1mdo_A 9 DFLPFSR-PA-MGAEELAAVKTVLDSGW---------ITTG----PKNQELEAAFCRLTGNQ---YAVAV-SSATAGMHI 69 (393)
T ss_dssp CCBCSCC-CC-CCHHHHHHHHHHHHHTC---------CSSS----HHHHHHHHHHHHHHCCS---EEEEE-SCHHHHHHH
T ss_pred cccccCC-CC-CCHHHHHHHHHHHhcCC---------cCCC----hHHHHHHHHHHHHhCCC---cEEEe-cChHHHHHH
Confidence 3555654 53 67889999988875411 0112 34568999999999985 57765 789999999
Q ss_pred HHhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccC
Q 043610 150 VPLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEF 225 (430)
Q Consensus 150 ~~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~ 225 (430)
++.++ +++||+|++..+++.+.. ..++..| +++.++..+ .+..+|+++++ +++++++|++++ ++|...
T Consensus 70 ~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~---~~~~~d~~~l~~~l~~~~~~v~~~~---~~G~~~ 141 (393)
T 1mdo_A 70 ALMALGIGEGDEVITPSMTWVSTL--NMIVLLGANPVMVDVDR---DTLMVTPEHIEAAITPQTKAIIPVH---YAGAPA 141 (393)
T ss_dssp HHHHTTCCTTCEEEEESSSCHHHH--HHHHHTTCEEEEECBCT---TTCCBCHHHHHHHCCTTEEEECCBC---GGGCCC
T ss_pred HHHHcCCCCCCEEEeCCCccHhHH--HHHHHCCCEEEEEeccC---CcCCCCHHHHHHhcCCCceEEEEeC---CCCCcC
Confidence 99999 899999998877776643 3456678 777777643 22347888887 777899888864 799998
Q ss_pred C--CCccc-cCCCcEEEEeccCcCCCCcc--ccccccEEEeCCC--ccccCCccEEEEEc-HHHHhccCCCCC--cccc-
Q 043610 226 K--EYPSA-KNSTGILVADMSSNFCSKPV--DVTRFGVIYAGAQ--KNVGPSGVTIVIVR-KDLLGNAQDKTP--LMLD- 294 (430)
Q Consensus 226 p--ei~~~-~~~g~~lvvD~a~s~G~~~i--dl~~~d~~~~s~~--K~~gp~G~g~l~v~-~~~~~~~~~~~p--~~~~- 294 (430)
| +|.++ +++|+++++|++|+.|.... .+...|++++|+| |++++...|+++.+ +++++.+.+... ...+
T Consensus 142 ~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~ 221 (393)
T 1mdo_A 142 DLDAIYALGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDA 221 (393)
T ss_dssp CHHHHHHHHHHHTCCBCEECTTCTTCEETTEETTSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-
T ss_pred CHHHHHHHHHHcCCeEEEECccccCCeECCeecCCCCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCcccc
Confidence 8 78886 68899999999999875421 1111579999999 99964336888886 777665432110 0000
Q ss_pred ccchhh---cC---CCCCC-ccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC-CCC-cc
Q 043610 295 YKIHDE---NN---SLYNT-PPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK-SVR-SF 365 (430)
Q Consensus 295 ~~~~~~---~~---~~~~T-~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~-~~r-s~ 365 (430)
+..... .. ...|+ .....+ .+..++..+. +++++.++.+++++++++.|.+ .++++..... ..+ ..
T Consensus 222 ~~~~~~~~~~~~~~~~~g~~~~~~~~-~~a~~~~~l~---~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~ 296 (393)
T 1mdo_A 222 WDRQSGGRAPQAEVLAPGYKYNLPDL-NAAIALAQLQ---KLDALNARRAAIAAQYHQAMAD-LPFQPLSLPSWEHIHAW 296 (393)
T ss_dssp ----------CCEESSCCCBCCCCHH-HHHHHHHHHH---THHHHHHHHHHHHHHHHHHHHT-SSCEECCCCSSCEECCC
T ss_pred hhhhcccccccccccccCccCCCCHH-HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCCCcee
Confidence 000000 00 01122 011111 1222222222 5778888888999999999987 5566542110 112 22
Q ss_pred ceEEEEcCC---CchhHHHHHHHHHcCCeecCCCCC-----------------------CCeeEEeecCCCCHHHHHHHH
Q 043610 366 MNVPFTLEK---SDLEAEFVKEAAKEKMVQLKGHRS-----------------------VGGMRASIYNAMPLAGVEKLV 419 (430)
Q Consensus 366 ~iv~f~~~~---~~~~~~~~~~L~~~Gi~~~~g~~~-----------------------~g~iRis~~~~~t~edv~~ll 419 (430)
..+.+.+++ .....++.+.|.++||.+.+|... .+.+|++++.+++++|+++++
T Consensus 297 ~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~ 376 (393)
T 1mdo_A 297 HLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVI 376 (393)
T ss_dssp SCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHH
T ss_pred EEEEEEecccccccCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHH
Confidence 356777762 112337999999999987765421 126999999999999999999
Q ss_pred HHHHHHHHh
Q 043610 420 AFMKDFQAK 428 (430)
Q Consensus 420 ~~L~~~~~~ 428 (430)
++|+++++.
T Consensus 377 ~~l~~~~~~ 385 (393)
T 1mdo_A 377 TALHQIAGQ 385 (393)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHhc
Confidence 999998764
No 126
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.90 E-value=1.9e-23 Score=211.30 Aligned_cols=327 Identities=12% Similarity=-0.030 Sum_probs=222.0
Q ss_pred CCceeecCCCC---CCcHHH--HHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh-----CCCCCcE---
Q 043610 69 DRVFNFAAGPA---NLPEKV--LLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL-----NIPQEYS--- 135 (430)
Q Consensus 69 ~~~~l~~~gp~---~~~~~V--~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~-----g~~~~~~--- 135 (430)
+.+++|+.|-. ..++.+ ++++.+.+.+. + ..++.+. .-..++|+.+++++ +++++ +
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~---~-----~~~y~~~--~g~~~lr~~ia~~~~~~~~~~~~~-~~~~ 115 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPD---E-----IFPYAPP--QGIEELRDLWQQKMLRDNPELSID-NMSR 115 (430)
T ss_dssp TCSEECCCSSCEETTEECCCHHHHTTBSSCCGG---G-----TSSCCCT--TCCHHHHHHHHHHHHHHCTTCCGG-GBCC
T ss_pred CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcc---c-----ccccCCC--CCCHHHHHHHHHHHhccCcccCCC-ccce
Confidence 45677777643 345555 66665544220 0 1122211 11236677777777 77765 6
Q ss_pred EEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHH-hC-CceEEecCCCCcCCCCCCccccc--cCC---C
Q 043610 136 VLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQK-FC-NPQVIWSGKAEKYTKIPNFDALE--QNP---D 208 (430)
Q Consensus 136 vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~-~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~---~ 208 (430)
|+++ +|++++++.++.+++++||+|++..+++.+.. ..++. .| +++.++...+ ++ .+|+++++ +++ +
T Consensus 116 i~~t-~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~~g~~~~~~~~~~~-~~--~~d~~~l~~~l~~~~~~ 189 (430)
T 2x5f_A 116 PIVT-NALTHGLSLVGDLFVNQDDTILLPEHNWGNYK--LVFNTRNGANLQTYPIFDK-DG--HYTTDSLVEALQSYNKD 189 (430)
T ss_dssp CEEE-SHHHHHHHHHHHHHCCTTCEEEEESSCCTHHH--HHHTTTTCCEEEEECCBCT-TS--CBCSHHHHHHHHHCCSS
T ss_pred EEEc-CCchHHHHHHHHHHhCCCCEEEEcCCcCccHH--HHHHHhcCCeEEEEeccCc-cC--CcCHHHHHHHHHhcCCC
Confidence 6664 89999999999999999999998877776643 44556 77 7777766431 12 36788886 544 7
Q ss_pred ccEEEEeecCCCccccCC--C---Cccc-cC-----CCcEEEEeccCcCCC------Ccc--ccc---cc---cEEEeCC
Q 043610 209 AKYLHICANETIHGVEFK--E---YPSA-KN-----STGILVADMSSNFCS------KPV--DVT---RF---GVIYAGA 263 (430)
Q Consensus 209 ~~lv~i~~~~t~tG~~~p--e---i~~~-~~-----~g~~lvvD~a~s~G~------~~i--dl~---~~---d~~~~s~ 263 (430)
+++|++++++||||.++| + |.++ ++ +|+++++|++|+... .++ ++. .. ++++.|+
T Consensus 190 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 269 (430)
T 2x5f_A 190 KVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGA 269 (430)
T ss_dssp EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEH
T ss_pred CEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEec
Confidence 899999999999999999 3 4443 47 999999999987432 122 332 23 4678999
Q ss_pred CccccCCc--cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHH-HHHHhcCHHHHHHHHH
Q 043610 264 QKNVGPSG--VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFE-YLLELGGLNEVEKMNR 337 (430)
Q Consensus 264 ~K~~gp~G--~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~-~l~~~~g~~~v~~~~~ 337 (430)
+|++|++| +|++++ ++++++.+...... ... ...+++|...++++..+|+ ...-...++.+.++++
T Consensus 270 sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~-------~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 341 (430)
T 2x5f_A 270 TKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKG-------LIR-SNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLK 341 (430)
T ss_dssp HHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHH-------HHH-TTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhh-------hhh-cccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHH
Confidence 99999778 799999 88887764320000 000 1224678888888888887 3110112566899999
Q ss_pred HHHHHHHHHHHc---cCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHH-cCCeecCCCCCCCeeEEeecCCCCHH
Q 043610 338 KKAELLYNVIDG---SNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAK-EKMVQLKGHRSVGGMRASIYNAMPLA 413 (430)
Q Consensus 338 ~l~~~l~~~l~~---~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~-~Gi~~~~g~~~~g~iRis~~~~~t~e 413 (430)
++++++.+.|.+ ..|+.+.+ + .+...+.+.+++ ....++.+.|.+ +||.+.+| ..+++|||++. ++++
T Consensus 342 ~~~~~l~~~L~~~~~~~g~~~~~--~--~~g~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g--~~~~iRis~~~-~~~e 413 (430)
T 2x5f_A 342 ERYEVTKEVVYADQYHSHWQAYD--F--NSGYFMAIKVHD-VDPEALRKHLIDKYSIGVIAL--NATDIRIAFSC-VEKD 413 (430)
T ss_dssp HHHHHHHHHHTCGGGTTTEEECC--C--CBSSEEEEEESS-SCHHHHHHHHHHHHCEECEEC--SSSEEEEEGGG-SCGG
T ss_pred HHHHHHHHHHHhhCCCCCceeeC--C--CceEEEEeCCCC-CCHHHHHHHHHHhCCEEEecC--CCCeEEEEEec-CCHH
Confidence 999999999983 14776653 1 233345667762 123378999987 89999887 34689999984 5899
Q ss_pred HHHHHHHHHHHHHHh
Q 043610 414 GVEKLVAFMKDFQAK 428 (430)
Q Consensus 414 dv~~ll~~L~~~~~~ 428 (430)
|++++++.|++++++
T Consensus 414 ~i~~~~~~l~~~l~~ 428 (430)
T 2x5f_A 414 DIPHVFDSIAKAIDD 428 (430)
T ss_dssp GHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998865
No 127
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.90 E-value=3.9e-23 Score=208.79 Aligned_cols=286 Identities=15% Similarity=0.057 Sum_probs=197.3
Q ss_pred HHHHHHHHHhC--------CCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecC
Q 043610 119 KAESDLRALLN--------IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSG 189 (430)
Q Consensus 119 ~~r~~la~l~g--------~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~ 189 (430)
++|+.++++++ .+++ +|+++ +|++++++.++..++++||+|++..+.|.+.. ...++..| +++.++..
T Consensus 87 ~lr~~la~~~~~~~g~~~~~~~~-~i~~~-~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~-~~~~~~~g~~~~~v~~~ 163 (428)
T 1iay_A 87 EFRKAIAKFMEKTRGGRVRFDPE-RVVMA-GGATGANETIIFCLADPGDAFLVPSPYYPAFN-RDLRWRTGVQLIPIHCE 163 (428)
T ss_dssp HHHHHHHHHHHHHTTTCSCCCTT-SCEEE-EHHHHHHHHHHHHHCCTTCEEEEESSCCTTHH-HHTTTTTCCEEEEECCC
T ss_pred HHHHHHHHHHHHhcCCCCCCChh-hEEEc-cChHHHHHHHHHHhCCCCCeEEEccCCCcchH-HHHHHhcCCEEEEeecC
Confidence 55566666655 5555 67765 78999999999999999999998877765532 11222457 66666654
Q ss_pred CCCcCCCCCCccccc--cC------CCccEEEEeecCCCccccCC--CC---ccc-cCCCcEEEEeccCcC---CCC-cc
Q 043610 190 KAEKYTKIPNFDALE--QN------PDAKYLHICANETIHGVEFK--EY---PSA-KNSTGILVADMSSNF---CSK-PV 251 (430)
Q Consensus 190 ~~~~~g~~~d~~~l~--i~------~~~~lv~i~~~~t~tG~~~p--ei---~~~-~~~g~~lvvD~a~s~---G~~-~i 251 (430)
.+ .+..+|+++++ ++ +++++|++++++|+||.+.| ++ .++ +++|+++++|++|+. +.. ..
T Consensus 164 ~~--~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~ 241 (428)
T 1iay_A 164 SS--NNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFV 241 (428)
T ss_dssp TT--TTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCC
T ss_pred Cc--cCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCcc
Confidence 21 22246788776 43 47999999999999999999 34 443 589999999999874 221 11
Q ss_pred c---cc-c-------cc--EEEeCCCccccCCc--cEEEEE-cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHH
Q 043610 252 D---VT-R-------FG--VIYAGAQKNVGPSG--VTIVIV-RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYM 315 (430)
Q Consensus 252 d---l~-~-------~d--~~~~s~~K~~gp~G--~g~l~v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a 315 (430)
+ +. . .| +++.|+||++|++| +|++++ ++++++.+.. . ..+++.+...+.+
T Consensus 242 ~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~-------~-------~~~~~~~~~~~~a 307 (428)
T 1iay_A 242 SIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARK-------M-------SSFGLVSTQTQYF 307 (428)
T ss_dssp CHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHH-------H-------HTTSCCCHHHHHH
T ss_pred CHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHH-------H-------HhcccCCHHHHHH
Confidence 2 21 1 46 78899999999888 599999 6777665421 0 0113556777777
Q ss_pred HHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc-----hhH-HHHHHHHHc
Q 043610 316 CGLVFEYLL-ELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD-----LEA-EFVKEAAKE 388 (430)
Q Consensus 316 ~~~al~~l~-~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~-----~~~-~~~~~L~~~ 388 (430)
+..+|+... -...++.+.+++.++++++++.|.+ .|+.+.+ + . ....+.+.+++.. ... ++.+.|.++
T Consensus 308 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~-~-~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 382 (428)
T 1iay_A 308 LAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEV-VGIKCLK--N-N-AGLFCWMDLRPLLRESTFDSEMSLWRVIIND 382 (428)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCBCC--C-S-SSSEEEEECGGGCSSSSHHHHHHHHHHHHHT
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcccC--C-C-eeEEEEEechhhcCCCchhHHHHHHHHHHHh
Confidence 777775421 0114678889999999999999997 4776543 1 1 2234556775311 122 688888776
Q ss_pred -CCeecCCCCC----CCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 389 -KMVQLKGHRS----VGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 389 -Gi~~~~g~~~----~g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
||.+.+|... .+++||+++ +++++++++++++|+++++++
T Consensus 383 ~gi~v~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~~ 427 (428)
T 1iay_A 383 VKLNVSPGSSFECQEPGWFRVCFA-NMDDGTVDIALARIRRFVGVE 427 (428)
T ss_dssp SCEECEEGGGGTCSSSSEEEEECS-SSCHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEeCchhhCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHhcc
Confidence 9998765321 357999998 679999999999999998764
No 128
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.90 E-value=1.2e-22 Score=204.47 Aligned_cols=328 Identities=12% Similarity=0.059 Sum_probs=212.3
Q ss_pred CCceeecCC-------CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610 69 DRVFNFAAG-------PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG 141 (430)
Q Consensus 69 ~~~~l~~~g-------p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ 141 (430)
+++++|+.| +.++++.|.+++.+...... .+.+ .. ....+..+.+.+.+....+.+...+|++ ++
T Consensus 38 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~---~~---~g~~~lr~~ia~~~~~~~~~~~~~~i~~-t~ 109 (418)
T 3rq1_A 38 ENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEH-VGYA---PI---AGIPDFLCAAEKECFGNFRPEGHIRSIA-TA 109 (418)
T ss_dssp GGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHH-HSCC---CT---TCCHHHHHHHHHHHHGGGCCSSEEEEEE-ES
T ss_pred CCeEECCCCcccCCCCCccccHHHHHHHHHhccccc-CCCC---CC---CChHHHHHHHHHHHhcccCccccccEEE-CC
Confidence 457777777 67788899998866432100 0110 00 1122222333333333334322115665 58
Q ss_pred cHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC----Ccc-EEE
Q 043610 142 GATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP----DAK-YLH 213 (430)
Q Consensus 142 gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~----~~~-lv~ 213 (430)
|+++++..++.+++++||+|++..+.+.++. ..++..| +++.++...+ ++ .+|+++++ +++ +++ +++
T Consensus 110 g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~--~~~~~~g~~~~~v~~~~~-~~--~~d~~~l~~~l~~~~~~~~~~~vi 184 (418)
T 3rq1_A 110 GGTGGIHHLIHNYTEPGDEVLTADWYWGAYR--VICSDTGRTLVTYSLFDE-HN--NFNHEAFQNRVNELAAKQTNVVVI 184 (418)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEESSCCTHHH--HHHHHTTCEEEEECSBCT-TS--SBCHHHHHHHHHHHHHHCSEEEEE
T ss_pred chHHHHHHHHHHhcCCCCEEEECCCCchhHH--HHHHHcCCEEEEEeeeCC-CC--CcCHHHHHHHHHHhhccCCCEEEE
Confidence 9999999999999999999998887766543 3556677 8877876432 22 46888886 443 566 788
Q ss_pred Eeec-CCCccccCC--CCccc----c------CCCcEEEEeccCc-CCCCc-----c--ccccc--c---EEEeCCCccc
Q 043610 214 ICAN-ETIHGVEFK--EYPSA----K------NSTGILVADMSSN-FCSKP-----V--DVTRF--G---VIYAGAQKNV 267 (430)
Q Consensus 214 i~~~-~t~tG~~~p--ei~~~----~------~~g~~lvvD~a~s-~G~~~-----i--dl~~~--d---~~~~s~~K~~ 267 (430)
++++ +||||.+.| ++.++ + ++|+++++|+++. ++... + ....+ + +++.|++|.+
T Consensus 185 ~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 264 (418)
T 3rq1_A 185 FNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGF 264 (418)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTT
T ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCC
Confidence 8888 999999999 44443 3 7999999999974 22211 0 11112 2 6778999999
Q ss_pred cCCc--cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH--H--hcCHHHHHHHHHH
Q 043610 268 GPSG--VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL--E--LGGLNEVEKMNRK 338 (430)
Q Consensus 268 gp~G--~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~--~--~~g~~~v~~~~~~ 338 (430)
|++| +|++++ ++++++.+.... .+ ... ..+.+++..++.++..+|+... + ...++.+++++++
T Consensus 265 ~~~G~r~G~~~~~~~~~~~~~~~~~~~----~~---~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 336 (418)
T 3rq1_A 265 TMYGQRVGAMIGISDDEEIADEFFEVN----KS---TSR-ATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRD 336 (418)
T ss_dssp TCCSSCCEEEEEEESSHHHHHHHHHHH----HH---HHH-HHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcCCcceEEEEEeCCHHHHHHHHHHH----HH---HHh-hccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 9778 799998 888877643210 00 000 0113567777777777774321 0 0124567788899
Q ss_pred HHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHH
Q 043610 339 KAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKL 418 (430)
Q Consensus 339 l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~l 418 (430)
+++++.+.|.+ .|+++.+ + .....+.+.+++ ..++.+.|.++||.+.+|. +++|||++ ..++++++++
T Consensus 337 ~~~~l~~~L~~-~g~~~~~--~--~~~~~~~~~~~~---~~~~~~~l~~~gi~v~~g~---~~iRis~~-~~~~~~i~~~ 404 (418)
T 3rq1_A 337 RADIFKQEAAQ-VGLPMLP--Y--RGGFFITIPTDS---ANAICEELKKEHIYVIALA---NGIRIAAC-GIPKCQMTGL 404 (418)
T ss_dssp HHHHHHHHHHH-HTCCCCC--C--CSSSEEEEECTT---HHHHHHHHHHTTEECEECS---SEEEEEGG-GSCHHHHTTH
T ss_pred HHHHHHHHHHh-cCCCCCC--C--CceEEEEcCCCC---HHHHHHHHHhCCEEEecCC---CCeEEEEe-cCCHHHHHHH
Confidence 99999999987 4776653 1 122233334431 3378888999999998863 47999977 5689999999
Q ss_pred HHHHHHHHHhh
Q 043610 419 VAFMKDFQAKH 429 (430)
Q Consensus 419 l~~L~~~~~~~ 429 (430)
++.|++++++.
T Consensus 405 ~~~l~~~l~~~ 415 (418)
T 3rq1_A 405 AEKIYNAMKSL 415 (418)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 99999988754
No 129
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.90 E-value=3.5e-22 Score=201.96 Aligned_cols=289 Identities=13% Similarity=0.095 Sum_probs=202.8
Q ss_pred HHHHHHHHHHHHHhCCCC--------CcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceE
Q 043610 115 SIIEKAESDLRALLNIPQ--------EYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQV 185 (430)
Q Consensus 115 ~~~~~~r~~la~l~g~~~--------~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~ 185 (430)
+..+.+.+.+++.+|.+. +.+|++ ++|++++++.++..++++||+|++..+++.+. ...++..| +++.
T Consensus 82 ~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~-t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~ 158 (425)
T 2r2n_A 82 ELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCV-TSGSQQGLCKVFEMIINPGDNVLLDEPAYSGT--LQSLHPLGCNIIN 158 (425)
T ss_dssp HHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEE-ESSHHHHHHHHHHHHCCTTCEEEEESSCCHHH--HHHHGGGTCEEEE
T ss_pred HHHHHHHHHHHHhcCCCCccccccCCcCcEEE-eCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHH--HHHHHHcCCEEEE
Confidence 445567777777788764 126666 58899999999999999999999888777664 24455667 7777
Q ss_pred EecCCCCcCCCCCCccccc--cC------------CCccEEEE-eecCCCccccCC-----CCccc-cCCCcEEEEeccC
Q 043610 186 IWSGKAEKYTKIPNFDALE--QN------------PDAKYLHI-CANETIHGVEFK-----EYPSA-KNSTGILVADMSS 244 (430)
Q Consensus 186 v~~~~~~~~g~~~d~~~l~--i~------------~~~~lv~i-~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~ 244 (430)
++..+ .+ +|+++|+ +. +++++|++ ++++||||.+++ +|.++ +++|+++++|++|
T Consensus 159 v~~~~---~~--~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~ 233 (425)
T 2r2n_A 159 VASDE---SG--IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPY 233 (425)
T ss_dssp ECEET---TE--ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred eCcCC---CC--CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCc
Confidence 76632 23 6777776 44 46888876 688999999999 34454 5899999999998
Q ss_pred c---CC-CCccccccc-----cEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHH
Q 043610 245 N---FC-SKPVDVTRF-----GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCI 313 (430)
Q Consensus 245 s---~G-~~~idl~~~-----d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~ 313 (430)
+ ++ ..+.++..+ .+++.|++|++| +| +|++++++++++.+.. . .....+++|...+
T Consensus 234 ~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~~-------~-----~~~~~~~~~~~~q 300 (425)
T 2r2n_A 234 YFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVIL-------H-----IQVSTLHPSTFNQ 300 (425)
T ss_dssp GGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEHHHHHHHHH-------H-----HHTTTCSSCHHHH
T ss_pred ccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCHHHHHHHHH-------H-----HHHhcCCCCHHHH
Confidence 7 32 222233222 378899999999 78 7999999988776421 0 0012246788888
Q ss_pred HHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHHHHHHcc-CCceecCCCCCCCccceEEEEcCCCchhHH-HHHHHHHc
Q 043610 314 YMCGLVFEYLLE---LGGLNEVEKMNRKKAELLYNVIDGS-NGFYKCPVEKSVRSFMNVPFTLEKSDLEAE-FVKEAAKE 388 (430)
Q Consensus 314 ~a~~~al~~l~~---~~g~~~v~~~~~~l~~~l~~~l~~~-~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~-~~~~L~~~ 388 (430)
.++..+|+.+.+ ...++.++++++++++++.+.|.+. .|+..+. .+ .....+.+.+++.....+ +.+.|.++
T Consensus 301 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~p--~~g~~~~~~~~~~~~~~~~~~~~l~~~ 377 (425)
T 2r2n_A 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWH-VP--AAGMFLWIKVKGINDVKELIEEKAVKM 377 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEC-CC--SBSSEEEEEETTCSCCHHHHHTHHHHT
T ss_pred HHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEe-CC--CceEEEEEEeCCCCCHHHHHHHHHHHC
Confidence 888888875321 1135777888899999999999863 3653221 12 122345567764222335 56788899
Q ss_pred CCeecCCCC-------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 389 KMVQLKGHR-------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 389 Gi~~~~g~~-------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
||.+.+|.. ..+++|||++. .++++++++++.|++++++
T Consensus 378 gv~v~pg~~f~~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 378 GVLMLPGNAFYVDSSAPSPYLRASFSS-ASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp TEECEEGGGGSSSTTSCCCEEEEECSS-CCHHHHHHHHHHHHHHHHH
T ss_pred CcEEechhhhcCCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHH
Confidence 999877532 13579999983 5999999999999998865
No 130
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.90 E-value=4.8e-22 Score=200.30 Aligned_cols=332 Identities=10% Similarity=0.020 Sum_probs=211.2
Q ss_pred CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CC
Q 043610 78 PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CT 156 (430)
Q Consensus 78 p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~ 156 (430)
..++++.+++++.+.+.+.+ .+ .+... ....+..+++++.+++++|.+ +++++ +|||++++.++.++ ++
T Consensus 11 ~~~~~~~~~~a~~~~~~~~~-~~--~~~~~---~g~~~l~~~l~~~la~~~g~~---~~i~~-~~gt~al~~~~~~~~~~ 80 (418)
T 2c81_A 11 WPQHSDRTRRKIEEVFQSNR-WA--ISGYW---TGEESMERKFAKAFADFNGVP---YCVPT-TSGSTALMLALEALGIG 80 (418)
T ss_dssp SSCCCHHHHHHHHHHHHHTC-CS--TTSBC---CSSCCHHHHHHHHHHHHHTCS---EEEEE-SCHHHHHHHHHHHTTCC
T ss_pred CCCCCHHHHHHHHHHHhcCC-cc--ccCcc---cCCHHHHHHHHHHHHHHhCCC---cEEEe-CCHHHHHHHHHHHcCCC
Confidence 34678999999999886521 11 01000 111244678899999999987 45665 67899999999998 88
Q ss_pred CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc
Q 043610 157 PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA 231 (430)
Q Consensus 157 ~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~ 231 (430)
+||+|++...++.+.. ..++..| +++.++..+ .+..+|+++++ +++++++|+++| +||...+ +|.++
T Consensus 81 ~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~~~~~~---~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~~~~i~~~ 152 (418)
T 2c81_A 81 EGDEVIVPSLTWIATA--TAVLNVNALPVFVDVEA---DTYCIDPQLIKSAITDKTKAIIPVH---LFGSMANMDEINEI 152 (418)
T ss_dssp TTCEEEEESSSCTHHH--HHHHHTTCEEEEECBCT---TTCSBCHHHHGGGCCTTEEEECCBC---CTTCCCCHHHHHHH
T ss_pred CcCEEEECCCccHhHH--HHHHHcCCEEEEEecCC---CCCCcCHHHHHHhhCCCCeEEEEeC---CcCCcccHHHHHHH
Confidence 9999998887777653 3455677 777777642 12247888887 678899888764 7899888 78886
Q ss_pred -cCCCcEEEEeccCcCCCC-c-cccccc-cEEE--eCCCccccCCccEEEEEc-HHHHhccCCCCCccccccch---hhc
Q 043610 232 -KNSTGILVADMSSNFCSK-P-VDVTRF-GVIY--AGAQKNVGPSGVTIVIVR-KDLLGNAQDKTPLMLDYKIH---DEN 301 (430)
Q Consensus 232 -~~~g~~lvvD~a~s~G~~-~-idl~~~-d~~~--~s~~K~~gp~G~g~l~v~-~~~~~~~~~~~p~~~~~~~~---~~~ 301 (430)
+++|+++++|++|+.|.. . ..+..+ |+.+ +++||++|+...|+++.+ +++++.+.+........... ...
T Consensus 153 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~~~~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 232 (418)
T 2c81_A 153 AQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKVLTAGEGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMH 232 (418)
T ss_dssp HHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCT
T ss_pred HHHCCCEEEEECcccccCccCCEecccccceEEEeccCCcccCCCCeEEEEECCHHHHHHHHHHHHhCcccccccccccc
Confidence 689999999999998873 1 112222 3444 455999987236888884 67665532210000000000 000
Q ss_pred CCC--CCCccHHH----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC--CCccceEEEEcC
Q 043610 302 NSL--YNTPPCYC----IYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS--VRSFMNVPFTLE 373 (430)
Q Consensus 302 ~~~--~~T~~~~~----~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~--~rs~~iv~f~~~ 373 (430)
... .+++...+ +..+.+++.... ..+++++.++.+++++++++.|.+..|+++...... .....++++.++
T Consensus 233 ~~~~~~~~~~~~g~~~~~~~~~aa~~~~~-l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 311 (418)
T 2c81_A 233 GDMQLVKKGDIQGSNYCLSEFQSAILLDQ-LQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFD 311 (418)
T ss_dssp TCBSEEECCSSCCCBCCCCHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEEC
T ss_pred chhhccccccccCcCCCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEc
Confidence 000 00111100 001112222111 235788889999999999999987558877521111 223335667776
Q ss_pred C---Cchh-HHHHHHHHHc-CCe---ecCCCCC--------------------------------------CCeeEEeec
Q 043610 374 K---SDLE-AEFVKEAAKE-KMV---QLKGHRS--------------------------------------VGGMRASIY 407 (430)
Q Consensus 374 ~---~~~~-~~~~~~L~~~-Gi~---~~~g~~~--------------------------------------~g~iRis~~ 407 (430)
+ .+.+ .++.+.|.++ ||. +..++.. .+.||++++
T Consensus 312 ~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~ 391 (418)
T 2c81_A 312 PVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHA 391 (418)
T ss_dssp GGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGG
T ss_pred cccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCC
Confidence 3 0123 3799999888 999 6554310 147999999
Q ss_pred CCC-CHHHHHHHHHHHHHHHHh
Q 043610 408 NAM-PLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 408 ~~~-t~edv~~ll~~L~~~~~~ 428 (430)
.++ |++||++++++|++++++
T Consensus 392 ~~~gt~edi~~~~~~l~~~~~~ 413 (418)
T 2c81_A 392 ILLAEPSHLSLLVDAVAELARK 413 (418)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHT
T ss_pred ccCCCHHHHHHHHHHHHHHHHh
Confidence 999 999999999999998764
No 131
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.90 E-value=1.8e-22 Score=208.61 Aligned_cols=330 Identities=11% Similarity=0.055 Sum_probs=219.4
Q ss_pred CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCcHHH
Q 043610 68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGGATT 145 (430)
Q Consensus 68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~gaT~ 145 (430)
.+..+++..|+...|..+++++.+.+.+..+.+...|... ....++.+.+.+.+.+..| ++++ +|+++ +|+++
T Consensus 94 ~p~~i~~~~~~~~~p~~~~~~a~~~l~~~~~~~~~~Y~~~---~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t-~G~~~ 168 (500)
T 3tcm_A 94 HPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHS---QGIHGLRDAIASGIASRDGFPANAD-DIFLT-DGASP 168 (500)
T ss_dssp SGGGGGCTTHHHHSCHHHHHHHHHHHTTSTTSCSSSCCCT---TCCHHHHHHHHHHHHHHHSSCCCGG-GEEEE-SSSHH
T ss_pred CcccccCCCCcccCCHHHHHHHHHHHHcCCCCcCCCcCCC---cChHHHHHHHHHHHHhhcCCCCCcc-cEEEc-CCHHH
Confidence 3456667666666888899988777765322122222111 2223344455555555556 3444 67664 78999
Q ss_pred HHHHHHhhcC-CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC------CccEEEEe
Q 043610 146 QFAAVPLNLC-TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP------DAKYLHIC 215 (430)
Q Consensus 146 a~~~~~~sl~-~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~------~~~lv~i~ 215 (430)
++..++..++ ++||+|++..+.+.++ ...++..| +++.++..++..| .+|+++|+ +++ ++++|+++
T Consensus 169 al~~~~~~l~~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~--~~d~~~l~~~l~~~~~~~~~~k~ivl~ 244 (500)
T 3tcm_A 169 GVHLMMQLLIRNEKDGILVPIPQYPLY--SASIALHGGALVPYYLNESTGW--GLETSDVKKQLEDARSRGINVRALVVI 244 (500)
T ss_dssp HHHHHHHHHCCSTTEEEEEEESCCTHH--HHHHHHTTCEEEEEECBTTTTS--BCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHcCCCCCEEEEeCCCcHhH--HHHHHHcCCEEEEEecccccCC--CCCHHHHHHHHHHHHhcCCCceEEEEE
Confidence 9999999998 7999999888877654 34455667 7777877543223 47888887 544 78999999
Q ss_pred ecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCC-----ccc-------c---cc-cc-EEEeCCCccc-cCCc
Q 043610 216 ANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSK-----PVD-------V---TR-FG-VIYAGAQKNV-GPSG 271 (430)
Q Consensus 216 ~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~-----~id-------l---~~-~d-~~~~s~~K~~-gp~G 271 (430)
+++||||.+++ + |.++ +++|+++++|+++..+.. ..+ + .+ .. +++.|++|.+ |++|
T Consensus 245 ~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G 324 (500)
T 3tcm_A 245 NPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECG 324 (500)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGG
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCc
Confidence 99999999999 3 4443 588999999999874321 122 1 11 12 5678999999 8888
Q ss_pred --cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHH-----------HHHHhcCHHHHHHH
Q 043610 272 --VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFE-----------YLLELGGLNEVEKM 335 (430)
Q Consensus 272 --~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~-----------~l~~~~g~~~v~~~ 335 (430)
+|++++ ++++++.+.. . . ....+++..+++++..+++ +.. .++.+.++
T Consensus 325 ~R~G~~~~~~~~~~~~~~l~~-------~---~---~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~ 388 (500)
T 3tcm_A 325 KRGGYFEITGFSAPVREQIYK-------I---A---SVNLCSNITGQILASLVMNPPKASDESYASYKA---EKDGILAS 388 (500)
T ss_dssp GCCEEEEEESCCTTHHHHHHH-------H---H---HTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHH---HHHHHHHH
T ss_pred cceEEEEEeCCCHHHHHHHHH-------H---H---hcccCCCHHHHHHHHHHhcCccccchhHHHHHH---HHHHHHHH
Confidence 799888 7777765421 0 0 1224678888888887775 322 35788899
Q ss_pred HHHHHHHHHHHHHccCCceecCCCCCCCccceEEE--EcCCC----------chhHHHH-HHHHHcCCeecCCCCC----
Q 043610 336 NRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF--TLEKS----------DLEAEFV-KEAAKEKMVQLKGHRS---- 398 (430)
Q Consensus 336 ~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f--~~~~~----------~~~~~~~-~~L~~~Gi~~~~g~~~---- 398 (430)
++++++++++.|.+..|+.+.+ + .+.+.+.+ .++.. ..+..++ +.|.++||.+.+|...
T Consensus 389 l~~~~~~l~~~L~~~~g~~~~~--~--~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~ 464 (500)
T 3tcm_A 389 LARRAKALEHAFNKLEGITCNE--A--EGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVP 464 (500)
T ss_dssp HHHHHHHHHHHHHTSTTEECCC--C--CBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCT
T ss_pred HHHHHHHHHHHHhcCCCcEEec--C--CeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCC
Confidence 9999999999999755887753 1 12232222 22210 0012233 4567789998876432
Q ss_pred -CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 399 -VGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 399 -~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
.+.+|+++. +++++++++++.|++++++
T Consensus 465 g~~~iRis~~--~~~e~i~~~i~~l~~~~~~ 493 (500)
T 3tcm_A 465 GTWHFRCTIL--PQEDKIPAVISRFTVFHEA 493 (500)
T ss_dssp TCCBEEEESC--SCTTTHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEC--CCHHHHHHHHHHHHHHHHH
Confidence 236999998 6888999999888887654
No 132
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.90 E-value=3.8e-23 Score=207.58 Aligned_cols=333 Identities=15% Similarity=0.120 Sum_probs=211.9
Q ss_pred ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHH-HHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH
Q 043610 71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEF-KSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA 149 (430)
Q Consensus 71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~-~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~ 149 (430)
.+.+.++....++.|++++.+.+.+..+.|... ...+.+... ....+.+++.+++++|.+++ + +++ ++|++++..
T Consensus 32 ~~~~~~~~n~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~-v~~-~sGs~a~~~ 107 (420)
T 3gbx_A 32 HIELIASENYTSPRVMQAQGSQLTNKYAEGYPG-KRYYGGCEYVDVVEQLAIDRAKELFGADYA-N-VQP-HSGSQANFA 107 (420)
T ss_dssp SEECCTTCCCCCHHHHHHHTSGGGGCCC---------------CHHHHHHHHHHHHHHHTCSEE-E-CCC-SSHHHHHHH
T ss_pred ceeeeccCCCCCHHHHHHHHHHHhcccccCCCC-ccccCchHHHHHHHHHHHHHHHHHhCCCCc-e-eEe-cCcHHHHHH
Confidence 345556666689999999998875422112110 011111111 23455677899999999753 3 434 456899999
Q ss_pred HHhhcCCCCCcEEEEeCChhHHHHH-HHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCcccc
Q 043610 150 VPLNLCTPNDPVDYIVTGSWGDKAF-KEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIHGVE 224 (430)
Q Consensus 150 ~~~sl~~~gd~vl~~~~g~~~~~~~-~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~tG~~ 224 (430)
++.+++++||+|++....+.+.... ......| .+..++...+ +.+ .+|+++++ +++ ++++|+++++++ |..
T Consensus 108 a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~-~~d~~~l~~~i~~~~~~~v~~~~~~~--~~~ 183 (420)
T 3gbx_A 108 VYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID-ESG-KIDYDEMAKLAKEHKPKMIIGGFSAY--SGV 183 (420)
T ss_dssp HHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEEC-TTC-SCCHHHHHHHHHHHCCSEEEECCTTC--CSC
T ss_pred HHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCC-ccC-CcCHHHHHHHHHhcCCeEEEEecCcc--CCc
Confidence 9999999999999877665442110 1111223 3343333211 122 47888887 554 689999987666 456
Q ss_pred CC--CCccc-cCCCcEEEEeccCcCCCC-----ccccccccEEEeCCCccc-cCCccEEEEEcH---HHHhccCCCCCcc
Q 043610 225 FK--EYPSA-KNSTGILVADMSSNFCSK-----PVDVTRFGVIYAGAQKNV-GPSGVTIVIVRK---DLLGNAQDKTPLM 292 (430)
Q Consensus 225 ~p--ei~~~-~~~g~~lvvD~a~s~G~~-----~idl~~~d~~~~s~~K~~-gp~G~g~l~v~~---~~~~~~~~~~p~~ 292 (430)
.| +|.++ +++|+++++|++|+.|.. +..+...|++++|+||++ ||.| |+++.++ ++.+.+... .
T Consensus 184 ~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-g~~~~~~~~~~~~~~~~~~---~ 259 (420)
T 3gbx_A 184 VDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRG-GLILAKGGDEELYKKLNSA---V 259 (420)
T ss_dssp CCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSGGGCSCSC-EEEEESSCCHHHHHHHHHH---H
T ss_pred cCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCCEEEeecccCCCCCCc-eEEEEcCCcHHHHHHhhhh---c
Confidence 77 67776 689999999999875543 444555689999999999 6888 9999987 555543210 0
Q ss_pred ccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEc
Q 043610 293 LDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTL 372 (430)
Q Consensus 293 ~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~ 372 (430)
.....++++...+.++..++..+. ..+++++.++..++++++++.|.+ .|+++.. +...+ ..+.+.+
T Consensus 260 --------~~~~~~~~~~~~~~a~~~a~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~~~~~-~~~~~~~ 326 (420)
T 3gbx_A 260 --------FPSAQGGPLMHVIAGKAVALKEAM-EPEFKVYQQQVAKNAKAMVEVFLN-RGYKVVS--GGTEN-HLFLLDL 326 (420)
T ss_dssp --------C----CCCCHHHHHHHHHHHHHTT-SHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGG--GSCSS-SEEEEEC
T ss_pred --------CCCCCCCcchhHHHHHHHHHHHHH-hHhHHHHHHHHHHHHHHHHHHHHh-cCCeecc--CCCCC-eEEEEEc
Confidence 011235677777777777776543 235788899999999999999997 7888763 11123 3455565
Q ss_pred CCCchhH-HHHHHHHHcCCeecC-------CCC-CCCeeEEeecCC----CCHHHHHHHHHHHHHHHHh
Q 043610 373 EKSDLEA-EFVKEAAKEKMVQLK-------GHR-SVGGMRASIYNA----MPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 373 ~~~~~~~-~~~~~L~~~Gi~~~~-------g~~-~~g~iRis~~~~----~t~edv~~ll~~L~~~~~~ 428 (430)
++.+.+. .+.+.|.++||.+.+ +.. ...++||++... .+++|+++++++|++++++
T Consensus 327 ~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 327 VDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDN 395 (420)
T ss_dssp GGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhC
Confidence 4322334 577788888999765 221 123599998754 4589999999999988754
No 133
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.90 E-value=5.7e-22 Score=200.50 Aligned_cols=330 Identities=12% Similarity=0.118 Sum_probs=213.7
Q ss_pred CCCceeecCCC--CCCcHHHHHHHHHHhhhccC-CCCcccccCCCcHHHHHHHHHHHHHHHHHh----CCCCCcEEEEEe
Q 043610 68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRG-SGMSVMEMSHRGKEFKSIIEKAESDLRALL----NIPQEYSVLFLQ 140 (430)
Q Consensus 68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~r~~la~l~----g~~~~~~vv~~~ 140 (430)
.+++++|+.|- .+.|+.|++++.+.+.++.. .+...|... .. ..++++.+++++ +.+++ +|+++
T Consensus 55 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~---~g----~~~l~~~ia~~~~~~~~~~~~-~i~~t- 125 (432)
T 3ei9_A 55 DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAE---QG----AKPLRAAIAKTFYGGLGIGDD-DVFVS- 125 (432)
T ss_dssp TCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCT---TC----CHHHHHHHHHHHHTTTTCCGG-GEEEE-
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCC---CC----CHHHHHHHHHHHHccCCCCcc-eEEEC-
Confidence 34677777765 46789999999998875422 222211111 11 235556666664 77665 77775
Q ss_pred CcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-------------CceEEecCCCCcCCCCCCccccccCC
Q 043610 141 GGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-------------NPQVIWSGKAEKYTKIPNFDALEQNP 207 (430)
Q Consensus 141 ~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-------------~~~~v~~~~~~~~g~~~d~~~l~i~~ 207 (430)
+|+++++.. +..++++||+|++..+.+.+.. ..++..| ++..++.... .+..++ ++..+
T Consensus 126 ~G~~~al~~-l~~l~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---l~~~~ 197 (432)
T 3ei9_A 126 DGAKCDISR-LQVMFGSNVTIAVQDPSYPAYV--DSSVIMGQTGQFNTDVQKYGNIEYMRCTPE--NGFFPD---LSTVG 197 (432)
T ss_dssp SCHHHHHHH-HHHHHCTTCCEEEEESCCTHHH--HHHHHHTCSCCEETTTTEETTCEEEECCGG--GTTSCC---GGGCC
T ss_pred CChHHHHHH-HHHHcCCCCEEEEeCCCCHHHH--HHHHHcCCcccccccccccCceEEeccCcc--cCCcCC---hhhCC
Confidence 789999987 4777799999999888877642 2333334 3455555321 121222 33246
Q ss_pred CccEEEEeecCCCccccCC--CC---ccc-cCCCcEEEEeccCc---CCCCccccc------cccEEEeCCCccccCCc-
Q 043610 208 DAKYLHICANETIHGVEFK--EY---PSA-KNSTGILVADMSSN---FCSKPVDVT------RFGVIYAGAQKNVGPSG- 271 (430)
Q Consensus 208 ~~~lv~i~~~~t~tG~~~p--ei---~~~-~~~g~~lvvD~a~s---~G~~~idl~------~~d~~~~s~~K~~gp~G- 271 (430)
++++|++++++||||.+++ ++ .++ +++|+++++|++|+ ++..+..+. +.++++.|++|++|++|
T Consensus 198 ~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~ 277 (432)
T 3ei9_A 198 RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGV 277 (432)
T ss_dssp CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTT
T ss_pred CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCccc
Confidence 8999999999999999998 44 443 58899999999988 333232222 22488999999999888
Q ss_pred -cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc
Q 043610 272 -VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS 350 (430)
Q Consensus 272 -~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~ 350 (430)
+|+++++++.+... ..+..-.+.... ....++++.+++.++..+++.... ..++++.++++++++++++.|.+
T Consensus 278 r~G~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~- 351 (432)
T 3ei9_A 278 RLGWTVIPKKLLYSD--GFPVAKDFNRII--CTCFNGASNISQAGALACLTPEGL-EAMHKVIGFYKENTNIIIDTFTS- 351 (432)
T ss_dssp CCEEEECCTTCBCTT--SCBHHHHHHHHH--HHSCCCSCHHHHHHHHHHSSHHHH-HHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred ceEEEEEChHHhhcc--hHHHHHHHHHHh--ccccCCCCHHHHHHHHHHHhcccH-HHHHHHHHHHHHHHHHHHHHHHH-
Confidence 89999987762110 000000010000 012346777888887777752211 24688899999999999999997
Q ss_pred CCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHH-cCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610 351 NGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAK-EKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDF 425 (430)
Q Consensus 351 ~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~-~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~ 425 (430)
.|+.+.+ + ..+ ..+.+.+++ ....++.+.|.+ +||.+.+|.. ..+++|||+. +++++++++++.|++-
T Consensus 352 ~g~~~~~--~-~~~-~~~~~~~~~-~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~--~~~e~l~~~l~rl~~~ 424 (432)
T 3ei9_A 352 LGYDVYG--G-KNA-PYVWVHFPN-QSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAF--GHRENILEACRRFKQL 424 (432)
T ss_dssp TTCCEEE--C-SSS-SEEEEECTT-SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred CCceecC--C-Ccc-eEEEEECCC-CCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEec--CCHHHHHHHHHHHHHH
Confidence 5877653 1 123 346677763 223367777654 5999877642 2468999974 4999999999999986
Q ss_pred HH
Q 043610 426 QA 427 (430)
Q Consensus 426 ~~ 427 (430)
-+
T Consensus 425 ~~ 426 (432)
T 3ei9_A 425 YK 426 (432)
T ss_dssp HT
T ss_pred hh
Confidence 44
No 134
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.90 E-value=1.5e-22 Score=205.01 Aligned_cols=284 Identities=14% Similarity=0.086 Sum_probs=195.2
Q ss_pred HHHHHHHHHhC--------CCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHH-HhC-CceEEec
Q 043610 119 KAESDLRALLN--------IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQ-KFC-NPQVIWS 188 (430)
Q Consensus 119 ~~r~~la~l~g--------~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~-~~g-~~~~v~~ 188 (430)
++|+.++++++ ++++ +++++ +|++++++.++..+.++||+|++..+.+.+.. ..++ ..| +++.++.
T Consensus 90 ~l~~~la~~~~~~~~~~~~~~~~-~v~~~-~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~~g~~~~~~~~ 165 (435)
T 3piu_A 90 AFKKAMVDFMAEIRGNKVTFDPN-HLVLT-AGATSANETFIFCLADPGEAVLIPTPYYPGFD--RDLKWRTGVEIVPIHC 165 (435)
T ss_dssp HHHHHHHHHHHHHTTTSSCCCGG-GEEEE-EHHHHHHHHHHHHHCCTTCEEEEEESCCTTHH--HHTTTTTCCEEEEEEC
T ss_pred HHHHHHHHHHHHhhCCCCCCCHH-HEEEc-CChHHHHHHHHHHhcCCCCeEEECCCccccHH--HHHHHhcCCEEEEeeC
Confidence 56666777666 5554 67775 78999999999999999999998888766542 2333 457 7777776
Q ss_pred CCCCcCCCCCCccccc--cC------CCccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCC---CC-c
Q 043610 189 GKAEKYTKIPNFDALE--QN------PDAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFC---SK-P 250 (430)
Q Consensus 189 ~~~~~~g~~~d~~~l~--i~------~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G---~~-~ 250 (430)
..+ .+..+|+++|+ +. +++++|++++++|+||.+++ + |.++ +++|+++++|++|+.+ .. .
T Consensus 166 ~~~--~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~ 243 (435)
T 3piu_A 166 TSS--NGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSF 243 (435)
T ss_dssp CGG--GTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCC
T ss_pred CCc--cCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC
Confidence 532 12246788776 43 38999999999999999999 3 4443 5889999999998742 21 1
Q ss_pred cccc----c---------cc--EEEeCCCccccCCc--cEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHH
Q 043610 251 VDVT----R---------FG--VIYAGAQKNVGPSG--VTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYC 312 (430)
Q Consensus 251 idl~----~---------~d--~~~~s~~K~~gp~G--~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~ 312 (430)
..+. + .| +++.|++|++|++| +|+++++ +.+.+.+... ..+++.+...
T Consensus 244 ~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~--------------~~~~~~~~~~ 309 (435)
T 3piu_A 244 ISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM--------------SSFGLVSSQT 309 (435)
T ss_dssp CCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHH--------------GGGSCCCHHH
T ss_pred cCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHH--------------hhcCCCCHHH
Confidence 1111 1 22 78899999999778 7999984 5554433210 0113445566
Q ss_pred HHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc------hhHHHHHHH
Q 043610 313 IYMCGLVFEYLLE-LGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD------LEAEFVKEA 385 (430)
Q Consensus 313 ~~a~~~al~~l~~-~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~------~~~~~~~~L 385 (430)
+.++..+++.... ...+++.+++++++++++++.|.+ .|+++.+ + .+...+.+.+++.. ...++.++|
T Consensus 310 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~~g~~~~~~l~~~~~~~~~~~~~~~~~~l 384 (435)
T 3piu_A 310 QHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQK-SGISCLN--G--NAGLFCWVDMRHLLRSNTFEAEMELWKKI 384 (435)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTCEECC--C--CSSSEEEEECGGGSSSSSHHHHHHHHHHH
T ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcccC--C--CeeEEEEEEcccccccCCchhHHHHHHHH
Confidence 6666666653210 114577888999999999999997 5887653 1 12234556665311 122688888
Q ss_pred HHc-CCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 386 AKE-KMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 386 ~~~-Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
.++ ||.+.+|.. ..+++||++... ++++++++++.|++++++
T Consensus 385 ~~~~gi~v~~g~~~~~~~~~~iRi~~~~~-~~e~i~~~l~~l~~~l~~ 431 (435)
T 3piu_A 385 VYEVHLNISPGSSCHCTEPGWFRVCFANL-PERTLDLAMQRLKAFVGE 431 (435)
T ss_dssp HHTSCEECEEGGGGTCSSTTEEEEECSSS-CHHHHHHHHHHHHHHHHH
T ss_pred HHHCCEEEeCCcccCCCCCCEEEEEeeCC-CHHHHHHHHHHHHHHHHH
Confidence 666 999876532 246899999755 999999999999998875
No 135
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.90 E-value=6.9e-23 Score=205.77 Aligned_cols=330 Identities=11% Similarity=0.068 Sum_probs=196.5
Q ss_pred CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh----C--CCCCcEEEEEeCc
Q 043610 69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL----N--IPQEYSVLFLQGG 142 (430)
Q Consensus 69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~----g--~~~~~~vv~~~~g 142 (430)
+.+++|+.|-....+.+.+++.+.+.+....+........++.. .-..++|+.+++++ | ++++ +|+++ +|
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~--~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t-~G 106 (417)
T 3g7q_A 31 PGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGP--QGKTALLNALAVLLRETLGWDIEPQ-NIALT-NG 106 (417)
T ss_dssp -CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCT--TSHHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SC
T ss_pred CCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCC--CCcHHHHHHHHHHHHHHhCCCCCcc-cEEEe-CC
Confidence 56888888765444444444444332211011000000111110 11234555555555 4 5555 77775 78
Q ss_pred HHHHHHHHHhhcCCCCC-----cEEEE-eCChhHHHHHHHHH---Hh-C-CceEEecCCCCcCCCCCCccccccCCCccE
Q 043610 143 ATTQFAAVPLNLCTPND-----PVDYI-VTGSWGDKAFKEAQ---KF-C-NPQVIWSGKAEKYTKIPNFDALEQNPDAKY 211 (430)
Q Consensus 143 aT~a~~~~~~sl~~~gd-----~vl~~-~~g~~~~~~~~~a~---~~-g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~l 211 (430)
+|++++.++..++++|| +|++. .+.+.++.. .+. .. + .+.+.....+ .++..+|++++++++++++
T Consensus 107 ~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~l~~~~~~~~ 183 (417)
T 3g7q_A 107 SQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYAD--SGLEDDLFVSARPNIELLPEG-QFKYHVDFEHLHIGEETGM 183 (417)
T ss_dssp HHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-------CCEEECCCEEEEEGGG-EEEEECCGGGCCCCTTEEE
T ss_pred cHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchh--hccchhhhccccCcccccCCc-ccccccCHHHhccccCceE
Confidence 99999999999988877 77765 445444321 111 11 2 3333333211 1122467777777788999
Q ss_pred EEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCC-----cc--ccccccEEEeCCCccccCCc--cEEEE
Q 043610 212 LHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSK-----PV--DVTRFGVIYAGAQKNVGPSG--VTIVI 276 (430)
Q Consensus 212 v~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~-----~i--dl~~~d~~~~s~~K~~gp~G--~g~l~ 276 (430)
|++++++||||.++| + |.++ +++|+++++|++|+.... .. +..+.++++.|++|+ +++| +|+++
T Consensus 184 v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~ 262 (417)
T 3g7q_A 184 ICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSKL-GLPGSRCGIII 262 (417)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGGG-TCTTSCCEEEE
T ss_pred EEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEechhc-cCCCcceEEEE
Confidence 999999999999999 3 4443 589999999999874221 11 122335889999994 6556 89999
Q ss_pred EcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHcc-
Q 043610 277 VRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLN-----EVEKMNRKKAELLYNVIDGS- 350 (430)
Q Consensus 277 v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~-----~v~~~~~~l~~~l~~~l~~~- 350 (430)
.++++++.+.. .. . ....+++...+.++..+++. ..+. .+.++++++++.+++.|.+.
T Consensus 263 ~~~~~~~~~~~-------~~---~--~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 326 (417)
T 3g7q_A 263 ANDKTITAIAN-------MN---G--IISLAPGGMGPAMMCEMIKR----NDLLRLSETVIKPFYYQRVQQTIAIIRRYL 326 (417)
T ss_dssp CCHHHHHHHHH-------HH---H--HHCCCCCSHHHHHHHHHHHT----TCHHHHHHHTHHHHHHHHHHHHHHHHHHHC
T ss_pred eCHHHHHHHHH-------hh---c--ceeeCCCcHHHHHHHHHHcC----cchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99888776422 00 0 01123455556666555542 1222 25667777888888888763
Q ss_pred C--CceecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCCC-----------CCeeEEeecCCCCHHHHH
Q 043610 351 N--GFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHRS-----------VGGMRASIYNAMPLAGVE 416 (430)
Q Consensus 351 ~--G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~~-----------~g~iRis~~~~~t~edv~ 416 (430)
. |+.+.. + .....+.+.++..+.+. ++.+.|.++||.+.+|... .+++|||++. ++++++
T Consensus 327 ~~~~~~~~~--~--~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~--~~~~i~ 400 (417)
T 3g7q_A 327 SEERCLIHK--P--EGAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP--EPDKIE 400 (417)
T ss_dssp CTTTCEEEC--C--CBSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS--CHHHHH
T ss_pred ccCCceeeC--C--CcceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC--CHHHHH
Confidence 2 455432 1 12234556776422333 7999999999998765321 3579999985 999999
Q ss_pred HHHHHHHHHHHh
Q 043610 417 KLVAFMKDFQAK 428 (430)
Q Consensus 417 ~ll~~L~~~~~~ 428 (430)
++++.|++++++
T Consensus 401 ~~~~~l~~~l~~ 412 (417)
T 3g7q_A 401 AGVKILAEEIER 412 (417)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 136
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.90 E-value=6.2e-22 Score=196.07 Aligned_cols=319 Identities=11% Similarity=0.044 Sum_probs=208.2
Q ss_pred eeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHH
Q 043610 72 FNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVP 151 (430)
Q Consensus 72 ~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~ 151 (430)
++++.+..++++.+++++.+.+... ....+ ...+++++.+++++|.+ +++++ +|||+|++.++
T Consensus 5 ~~~~~~~~~~~~~v~~a~~~~~~~~---------~~~~~----~~~~~l~~~la~~~~~~---~~~~~-~sGt~al~~al 67 (367)
T 3nyt_A 5 IDLKNQQARIKDKIDAGIQRVLRHG---------QYILG----PEVTELEDRLADFVGAK---YCISC-ANGTDALQIVQ 67 (367)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHC---------CCSSC----HHHHHHHHHHHHHHTCS---EEEEE-SCHHHHHHHHH
T ss_pred ccccccccccCHHHHHHHHHHHhcC---------CccCC----hHHHHHHHHHHHHhCCC---cEEEe-CCHHHHHHHHH
Confidence 3455555567888999988876531 01112 23568899999999986 56765 78999999999
Q ss_pred hhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC-
Q 043610 152 LNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK- 226 (430)
Q Consensus 152 ~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p- 226 (430)
.++ +++||+|++....+.+.. ..++..| +++.++..++ . ..+|+++++ +++++++|+ +++++|...|
T Consensus 68 ~~~~~~~gd~Vi~~~~~~~~~~--~~~~~~G~~~~~~~~~~~--~-~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~~ 139 (367)
T 3nyt_A 68 MALGVGPGDEVITPGFTYVATA--ETVALLGAKPVYVDIDPR--T-YNLDPQLLEAAITPRTKAII---PVSLYGQCADF 139 (367)
T ss_dssp HHTTCCTTCEEEEESSSCTHHH--HHHHHTTCEEEEECBCTT--T-CSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCH
T ss_pred HHhCCCCcCEEEECCCccHHHH--HHHHHcCCEEEEEecCCc--c-CCcCHHHHHHhcCcCCcEEE---eeCCccChhhH
Confidence 998 799999998887776643 3455678 8877877532 1 247888887 788888877 5678999888
Q ss_pred -CCccc-cCCCcEEEEeccCcCCCCc--cccccc-cEEEeC--CCccccCCc-cEEEEEc-HHHHhccCCCCCc--cccc
Q 043610 227 -EYPSA-KNSTGILVADMSSNFCSKP--VDVTRF-GVIYAG--AQKNVGPSG-VTIVIVR-KDLLGNAQDKTPL--MLDY 295 (430)
Q Consensus 227 -ei~~~-~~~g~~lvvD~a~s~G~~~--idl~~~-d~~~~s--~~K~~gp~G-~g~l~v~-~~~~~~~~~~~p~--~~~~ 295 (430)
+|.++ +++|+++++|++|++|... ..+..+ |++++| .+|++|+.| .|+++.+ +++.+.+...... ...|
T Consensus 140 ~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~~g~~~~~ 219 (367)
T 3nyt_A 140 DAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIARHGQDRRY 219 (367)
T ss_dssp HHHHHHHHHTTCCBEEECTTTTTCEETTEETTSSSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEETT
T ss_pred HHHHHHHHHcCCEEEEECccccCCeECCeeccCCCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHhcCCCcCc
Confidence 78886 6899999999999988651 112222 778877 589998755 5666664 5665543221110 0000
Q ss_pred cchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC-CCccceEEEEcCC
Q 043610 296 KIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS-VRSFMNVPFTLEK 374 (430)
Q Consensus 296 ~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~-~rs~~iv~f~~~~ 374 (430)
.. ...+.. ...+.....++...++ .+++..++.+++++++++.|.+ .|+.+....+. ......+.+.+++
T Consensus 220 ~~-~~~g~~-~~~~~~~aa~~~~~l~------~~~~~~~~~~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (367)
T 3nyt_A 220 HH-IRVGVN-SRLDTLQAAILLPKLE------IFEEEIALRQKVAAEYDLSLKQ-VGIGTPFIEVNNISVYAQYTVRMDN 290 (367)
T ss_dssp EE-CSCCCB-CCCCHHHHHHHHHHHH------THHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCTTEECCCSSEEEECSS
T ss_pred ee-eccCcC-CCccHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHhcc-CCeeccCCCCCCceeeEEEEEEeCC
Confidence 00 000111 1233322222222232 4577888889999999999997 46554322111 1233345555542
Q ss_pred CchhHHHHHHHHHcCCeecCCCC----------------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610 375 SDLEAEFVKEAAKEKMVQLKGHR----------------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 375 ~~~~~~~~~~L~~~Gi~~~~g~~----------------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~ 427 (430)
..++.+.|.++||.+..++. ....+|++++..+|++||+++++.|++.-.
T Consensus 291 ---~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~~~ 362 (367)
T 3nyt_A 291 ---RESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNLEH 362 (367)
T ss_dssp ---HHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC---
T ss_pred ---HHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHhh
Confidence 23689999999998654321 013699999999999999999999987543
No 137
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.89 E-value=1.9e-22 Score=205.49 Aligned_cols=336 Identities=13% Similarity=0.078 Sum_probs=219.9
Q ss_pred CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHH-HHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610 70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAE-SDLRALLNIPQEYSVLFLQGGATTQFA 148 (430)
Q Consensus 70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r-~~la~l~g~~~~~~vv~~~~gaT~a~~ 148 (430)
+.+++.+++.++++.|++++.+.+.+....|... .....+....+.++++. +.+++++|++. +.++++||++++.
T Consensus 46 ~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~g~~~-~~~~~g~~~~~~~e~~a~~~la~~~g~~~---~~v~~~sGs~a~~ 121 (447)
T 3h7f_A 46 DTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPG-RRYYGGCEHVDVVENLARDRAKALFGAEF---ANVQPHSGAQANA 121 (447)
T ss_dssp HSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETT-EESSSCCHHHHHHHHHHHHHHHHHHTCSE---EECCCSSHHHHHH
T ss_pred CceeEecCCCCCCHHHHHHHHHHhcCCccccCCc-ccccCccHHHHHHHHHHHHHHHHHcCCCc---eEEEeCCHHHHHH
Confidence 4577788888889999999998875422222211 12222344444555555 99999999874 3342467899999
Q ss_pred HHHhhcCCCCCcEEEEeCChhHHHHHH-HHHHhC-CceE--EecCCCCcCCCCCCccccc--c-CCCccEEEEeecCCCc
Q 043610 149 AVPLNLCTPNDPVDYIVTGSWGDKAFK-EAQKFC-NPQV--IWSGKAEKYTKIPNFDALE--Q-NPDAKYLHICANETIH 221 (430)
Q Consensus 149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~-~a~~~g-~~~~--v~~~~~~~~g~~~d~~~l~--i-~~~~~lv~i~~~~t~t 221 (430)
.++.+++++||+|++....+.++.... .....| .... ++... +. ..+|+++++ + ..++++|+++.+++++
T Consensus 122 ~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~-~~~d~~~l~~~i~~~~~~~i~~~~~~~~~ 198 (447)
T 3h7f_A 122 AVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDP--AT-HLIDMDAVRATALEFRPKVIIAGWSAYPR 198 (447)
T ss_dssp HHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCT--TT-CSCCHHHHHHHHHHHCCSEEEEECSSCCS
T ss_pred HHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCc--cc-CCcCHHHHHHHHHhcCCeEEEEcCCCCCC
Confidence 999999999999998776553311000 001112 2333 33322 12 257888887 4 3578899998888877
Q ss_pred cccCCCCccc-cCCCcEEEEeccCcCCC-----CccccccccEEEeCCCccc-cCCccEEEEEcHHHHhccCCCCCcccc
Q 043610 222 GVEFKEYPSA-KNSTGILVADMSSNFCS-----KPVDVTRFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPLMLD 294 (430)
Q Consensus 222 G~~~pei~~~-~~~g~~lvvD~a~s~G~-----~~idl~~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~~~~ 294 (430)
+.-+.+|.++ +++|+++++|++|..|. .+-.+...|+++.|+||++ ||.| |+++.++++++.+.+.
T Consensus 199 ~~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~~di~~~s~sK~l~G~~g-G~i~~~~~~~~~l~~~------ 271 (447)
T 3h7f_A 199 VLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGGGRS-GLIVGKQQYAKAINSA------ 271 (447)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSGGGCCCSC-EEEEECGGGHHHHHHH------
T ss_pred ccCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCCCcEEEecCCcCCCCCCe-EEEEECHHHHHHHhhh------
Confidence 7622278886 68999999999986542 2212344589999999999 5988 9999998776653210
Q ss_pred ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc----CCceecCCCCCCCccceEEE
Q 043610 295 YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS----NGFYKCPVEKSVRSFMNVPF 370 (430)
Q Consensus 295 ~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~----~G~~~~~~~~~~rs~~iv~f 370 (430)
......++++...+.++..++..+.+ .++++..++..++++++.+.|.+. .|+.++. .+ ..+ ..+.+
T Consensus 272 -----~~~~~~~~~~~~~~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~-~~-~~~-~~~~~ 342 (447)
T 3h7f_A 272 -----VFPGQQGGPLMHVIAGKAVALKIAAT-PEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVS-GG-TDV-HLVLV 342 (447)
T ss_dssp -----HTTTTCSSCCHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGG-GS-CSS-SEEEE
T ss_pred -----cCCcccCCccHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEec-CC-CCC-CEEEE
Confidence 01113357777777888888875542 256888999999999999999863 2887763 11 122 23445
Q ss_pred EcCCCchhH-HHHHHHHHcCCeec----CCC----CCCCeeEEeecCC----CCHHHHHHHHHHHHHHHHh
Q 043610 371 TLEKSDLEA-EFVKEAAKEKMVQL----KGH----RSVGGMRASIYNA----MPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 371 ~~~~~~~~~-~~~~~L~~~Gi~~~----~g~----~~~g~iRis~~~~----~t~edv~~ll~~L~~~~~~ 428 (430)
.+.+.+.+. .+.+.|.++||.+. ++. ...+++||++... .+++|+++++++|++++..
T Consensus 343 ~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~ 413 (447)
T 3h7f_A 343 DLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALAT 413 (447)
T ss_dssp ECTTSSCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHS
T ss_pred EcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 665433344 45566777799876 331 1235799997653 5799999999999998753
No 138
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.89 E-value=3.1e-23 Score=211.30 Aligned_cols=279 Identities=10% Similarity=0.040 Sum_probs=198.1
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcC
Q 043610 116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKY 194 (430)
Q Consensus 116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~ 194 (430)
.++++++.+++ +|++ + +++ +++|+|+++.+++.+++++||+|++..+.|.+.. ..+...| +++.++...+.++
T Consensus 58 ~~~~~~~~la~-~g~~-~-~v~-~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~--~~~~~~G~~~~~v~~~~~~~~ 131 (446)
T 2x3l_A 58 VILKSMKQVEK-HSDY-D-GYF-LVNGTTSGILSVIQSFSQKKGDILMARNVHKSVL--HALDISQQEGHFIETHQSPLT 131 (446)
T ss_dssp HHHHHHHHHCS-CTTE-E-EEE-ESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHH--HHHHHHTCCEEECEEEECTTT
T ss_pred HHHHHHHHHHh-cCCC-c-eEE-EeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHH--HHHHHcCCeEEEEeCeecccc
Confidence 45689999999 9987 2 555 4689999999999999999999998887777643 2334467 7777766211122
Q ss_pred C--CCCCccccccCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC-----ccccccc--cEEEeC
Q 043610 195 T--KIPNFDALEQNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK-----PVDVTRF--GVIYAG 262 (430)
Q Consensus 195 g--~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~-----~idl~~~--d~~~~s 262 (430)
+ ..+|++++ +++++++|++++ .|++|.+.| +|.++ +++|+++++|++|+. .. +++...+ |+++.|
T Consensus 132 ~~~~~~d~~~l-~~~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~-~~~f~~~~~~~~~~g~Di~~~S 208 (446)
T 2x3l_A 132 NHYNKVNLSRL-NNDGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGA-HFGLQGFPDSTLNYQADYVVQS 208 (446)
T ss_dssp SSEEEEEC--------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCT-TTTSTTSCCCGGGGTCSEEEEC
T ss_pred CcCCCCCHHHH-cCCCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhh-hhccCCCCCChHHcCCCEEEEC
Confidence 2 13566666 678899999999 667999999 78886 689999999999875 22 4444433 799999
Q ss_pred CCccc-cCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610 263 AQKNV-GPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE 341 (430)
Q Consensus 263 ~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~ 341 (430)
+||++ |+.|+|++++++++++ ..+ +... .. ....++++...++++..+++++.+ .|.+++.++..++++
T Consensus 209 ~~K~l~~~~g~g~l~~~~~~i~-~~~----~~~~---~~-~~~~~s~~~~~~aal~~a~~~l~~-~g~~~~~~~~~~l~~ 278 (446)
T 2x3l_A 209 FHKTLPALTMGSVLYIHKNAPY-REN----IIEY---LS-YFQTSSPSYLIMASLESAAQFYKT-YDSTLFFAKRAQLIE 278 (446)
T ss_dssp HHHHSSSCTTCEEEEEETTCTT-HHH----HHHH---HH-HHSCSSCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHH
T ss_pred CccccccccccEEEEEcCCcCC-HHH----HHHH---HH-HHcCCCchHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHH
Confidence 99988 6889999999887654 111 0000 00 012367888888888888888774 466768888888888
Q ss_pred HHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCeec-CCCCCCCeeEEeecCCCCHHHHHHHH
Q 043610 342 LLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQL-KGHRSVGGMRASIYNAMPLAGVEKLV 419 (430)
Q Consensus 342 ~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~-~g~~~~g~iRis~~~~~t~edv~~ll 419 (430)
++++. |++++... .+..+.+.+++ .+. ++.+.|.++||.+. .|. +.+|++++.+++++|+ +++
T Consensus 279 ~l~~~-----g~~~~~~~----~~~~l~i~~~~--~~~~~l~~~L~~~GI~v~~~g~---~~iRi~~~~~~t~e~i-~l~ 343 (446)
T 2x3l_A 279 CLENK-----GFEMLQVD----DPLKLLIKYEG--FTGHDIQNWFMNAHIYLELADD---YQALAILPLWHHDDTY-LFD 343 (446)
T ss_dssp HHHHH-----TCEEEECS----STTEEEEECTT--SCHHHHHHHHHHTTEEESEECS---SCEEEECCCCCTTCCC-CHH
T ss_pred HHHHc-----CCEECcCC----CCeEEEEEeCC--cCHHHHHHHHHHCCCEEEecCC---CEEEEEeecCCCHHHH-HHH
Confidence 88876 66665311 12346677763 333 78889988899986 443 4799999999999999 999
Q ss_pred HHHHHHHHh
Q 043610 420 AFMKDFQAK 428 (430)
Q Consensus 420 ~~L~~~~~~ 428 (430)
++|++++++
T Consensus 344 ~aL~~~~~~ 352 (446)
T 2x3l_A 344 SLLRKIEDM 352 (446)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 999998754
No 139
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.89 E-value=7.7e-23 Score=200.37 Aligned_cols=306 Identities=14% Similarity=0.107 Sum_probs=194.1
Q ss_pred CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCC
Q 043610 80 NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPND 159 (430)
Q Consensus 80 ~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd 159 (430)
.+++.+++++.+... +...+ ...+ ...++|+.+++++|.+ +++++ +|||+++.+++.++++|||
T Consensus 15 ~p~~~~~~a~~~~~~-----~~~~y---~~~~----~~~~l~~~la~~~g~~---~~~~~-~~gt~a~~~~~~~~~~~gd 78 (347)
T 1jg8_A 15 KPTEEMRKAMAQAEV-----GDDVY---GEDP----TINELERLAAETFGKE---AALFV-PSGTMGNQVSIMAHTQRGD 78 (347)
T ss_dssp CCCHHHHHHHHTCCC-----CCGGG---TCCH----HHHHHHHHHHHHHTCS---EEEEE-SCHHHHHHHHHHHHCCTTC
T ss_pred CCCHHHHHHHhcCCC-----CCccc---CCCh----HHHHHHHHHHHHhCCc---eEEEe-cCcHHHHHHHHHHhcCCCC
Confidence 456788888865421 11001 1122 3457889999999985 45665 6788999998888889999
Q ss_pred cEEEEeCChhHHH-HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC------CccEEEEeecCCCc-cccCC--
Q 043610 160 PVDYIVTGSWGDK-AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP------DAKYLHICANETIH-GVEFK-- 226 (430)
Q Consensus 160 ~vl~~~~g~~~~~-~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~------~~~lv~i~~~~t~t-G~~~p-- 226 (430)
+|++..+.+++.. ....++..| +++.+ ..+ .+ .+|+++++ +++ ++++|++++++|+| |.++|
T Consensus 79 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~---~~-~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~ 153 (347)
T 1jg8_A 79 EVILEADSHIFWYEVGAMAVLSGVMPHPV-PGK---NG-AMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLE 153 (347)
T ss_dssp EEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEE---TT-EECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHH
T ss_pred EEEEcCcchhhhccccchhhccCeEEEEe-cCC---CC-ccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHH
Confidence 9998777655421 112344556 66655 321 22 46888886 554 69999999999999 99998
Q ss_pred C---Cccc-cCCCcEEEEeccCcCCC---Cccccc----cccEEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCcccc
Q 043610 227 E---YPSA-KNSTGILVADMSSNFCS---KPVDVT----RFGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLD 294 (430)
Q Consensus 227 e---i~~~-~~~g~~lvvD~a~s~G~---~~idl~----~~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~ 294 (430)
+ |.++ +++|+++++|++|.++. ...+.. ..|.++.++||++| |.| ++++.++++++.+....+ .+
T Consensus 154 ~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G-~~~~~~~~~~~~~~~~~~-~~- 230 (347)
T 1jg8_A 154 NIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVG-SVVVGDRDFIERARKARK-ML- 230 (347)
T ss_dssp HHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSC-EEEEECHHHHHHHHHHHH-HH-
T ss_pred HHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCce-EEEEcCHHHHHHHHHHHH-Hc-
Confidence 3 4444 57899999999886532 122222 34777789999997 544 366678877765321000 00
Q ss_pred ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC
Q 043610 295 YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK 374 (430)
Q Consensus 295 ~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~ 374 (430)
+.. ...+....++...+++... +.+. +..++++++++.|++. |+.+.. .+ ..+ ..+.+.+++
T Consensus 231 -------~~~-~~~~~~~~~~~~~~l~~~~-----~~~~-~~~~~~~~l~~~L~~~-~~~~~~-~~-~~~-~~~~~~~~~ 292 (347)
T 1jg8_A 231 -------GGG-MRQAGVLAAAGIIALTKMV-----DRLK-EDHENARFLALKLKEI-GYSVNP-ED-VKT-NMVILRTDN 292 (347)
T ss_dssp -------TCC-CSSTHHHHHHHHHHHHHSS-----TTHH-HHHHHHHHHHHHHHHH-TCBCCG-GG-CCS-SEEEEECTT
T ss_pred -------CCc-hhHHHHHHHHHHHHHHHHH-----HHHH-HHHHHHHHHHHHHHhc-Cceecc-CC-Ccc-eEEEEEccc
Confidence 000 0112222233334454321 2222 2334667888888874 766421 11 233 346677763
Q ss_pred CchhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 375 SDLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 375 ~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
.+.+. ++.++|.++||.+.++. .+.+|++++.+++++|+++++++|++++++.
T Consensus 293 ~~~~~~~~~~~l~~~gi~v~~~~--~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 293 LKVNAHGFIEALRNSGVLANAVS--DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp SSSCHHHHHHHHHHHTEECEEEE--TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHCCCEEecCC--CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 12233 79999988999876532 3579999998999999999999999988753
No 140
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.89 E-value=6.4e-21 Score=190.21 Aligned_cols=317 Identities=10% Similarity=0.018 Sum_probs=210.0
Q ss_pred eeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHH
Q 043610 72 FNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVP 151 (430)
Q Consensus 72 ~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~ 151 (430)
+++..++..+++.+++++.+.+.+. .+.. ....+++++.+++++|.+ +++++ +|||++++.++
T Consensus 4 ~~~~~~~~~~~~~~~~a~~~~~~~~----------~~~~---~~~~~~l~~~la~~~~~~---~~i~~-~sGt~a~~~al 66 (390)
T 3b8x_A 4 INYPLASSTWDDLEYKAIQSVLDSK----------MFTM---GEYVKQYETQFAKTFGSK---YAVMV-SSGSTANLLMI 66 (390)
T ss_dssp -CBCSCCCCCCHHHHHHHHHHHHHT----------CCSS---CHHHHHHHHHHHHHHTCS---EEEEE-SCHHHHHHHHH
T ss_pred eeccCCCCCCCHHHHHHHHHHHHcC----------CCCC---ChHHHHHHHHHHHHHCCC---cEEEE-CCHHHHHHHHH
Confidence 4555688889999999999887541 1111 134668999999999986 45665 67889999999
Q ss_pred hhc-------CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610 152 LNL-------CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH 221 (430)
Q Consensus 152 ~sl-------~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t 221 (430)
.++ +++||+|++....+.+.. ..++..| +++.++..++ . ..+|+++++ +++++++|++++ ++
T Consensus 67 ~~~~~~~~~~~~~g~~Vi~~~~~~~~~~--~~~~~~g~~~~~~~~~~~--~-~~~d~~~l~~~i~~~~~~v~~~~---~~ 138 (390)
T 3b8x_A 67 AALFFTKKPRLKKGDEIIVPAVSWSTTY--YPLQQYGLRVKFVDIDIN--T-LNIDIESLKEAVTDSTKAILTVN---LL 138 (390)
T ss_dssp HHTTSSSSCSCCTTCEEEEESSSCHHHH--HHHHHTTCEEEEECBCTT--T-CSBCHHHHHHHCCTTEEEEEEEC---GG
T ss_pred HHHHhhhhcCCCCcCEEEECCCCcHHHH--HHHHHcCCEEEEEecCcc--c-cCcCHHHHHHHhCcCCeEEEEEC---Cc
Confidence 988 788999998877776643 2345667 7777776531 1 247888887 788899999984 56
Q ss_pred cccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc----cEEE---eCCCccccCCccEEEEEcH-HHHhccCCCCC
Q 043610 222 GVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF----GVIY---AGAQKNVGPSGVTIVIVRK-DLLGNAQDKTP 290 (430)
Q Consensus 222 G~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~----d~~~---~s~~K~~gp~G~g~l~v~~-~~~~~~~~~~p 290 (430)
|...| +|.++ +++|+++++|++|++|..+ +...+ |+.. .+++|..++.| |+++.++ ++.+.+.+...
T Consensus 139 g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~g~~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~~~~~~~~~ 216 (390)
T 3b8x_A 139 GNPNNFDEINKIIGGRDIILLEDNCESMGATF-NNKCAGTFGLMGTFSSFYSNHIATMEG-GCIVTDDEEIYHILLCIRA 216 (390)
T ss_dssp GCCCCHHHHHHHHTTSCCEEEEECTTCTTCEE-TTEETTSSSSEEEEECCTTSSSCSSSC-EEEEESCHHHHHHHHHHTB
T ss_pred cChhhHHHHHHHHHHcCCEEEEECcCcccCEE-CCcccccccceEEEEccCCCCCccCCc-eEEEeCCHHHHHHHHHHHh
Confidence 88888 78886 7899999999999998765 44333 3333 33445335667 9999886 55443221010
Q ss_pred cc--cc---------------ccc---hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc
Q 043610 291 LM--LD---------------YKI---HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS 350 (430)
Q Consensus 291 ~~--~~---------------~~~---~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~ 350 (430)
.- .+ +.. ....+..+++++....+++.. ++. ++++.++.+++++++++.|.+.
T Consensus 217 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~-l~~------l~~~~~~~~~~~~~l~~~L~~~ 289 (390)
T 3b8x_A 217 HGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQ-LKK------LPRFISVRRKNAEYFLDKFKDH 289 (390)
T ss_dssp TTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHH-HHH------HHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHH-HHH------HHHHHHHHHHHHHHHHHHhcCC
Confidence 00 00 000 001122234667666655543 442 4678889999999999999875
Q ss_pred CCceecCCCCCCCccceEEEEcCCC-chhH-HHHHHHHHcCCeecC---CCC--C----------------------CCe
Q 043610 351 NGFYKCPVEKSVRSFMNVPFTLEKS-DLEA-EFVKEAAKEKMVQLK---GHR--S----------------------VGG 401 (430)
Q Consensus 351 ~G~~~~~~~~~~rs~~iv~f~~~~~-~~~~-~~~~~L~~~Gi~~~~---g~~--~----------------------~g~ 401 (430)
.|+++.. .+.......+.+.+++. +.+. ++.+.|.++||.+.. |.. . .+.
T Consensus 290 ~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (390)
T 3b8x_A 290 PYLDVQQ-ETGESSWFGFSFIIKKDSGVIRKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNG 368 (390)
T ss_dssp SSEEECC-CCSBCCCCEEEEEECTTSCCCHHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHE
T ss_pred CCcccCC-CCCCcccEEEEEEecCcCcccHHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCE
Confidence 5887653 22122223355555521 1233 789999999998654 210 0 025
Q ss_pred eEEeecCCCCHHHHHHHHHHHH
Q 043610 402 MRASIYNAMPLAGVEKLVAFMK 423 (430)
Q Consensus 402 iRis~~~~~t~edv~~ll~~L~ 423 (430)
||++++.++|++||++++++|+
T Consensus 369 l~l~~~~~~t~~di~~i~~~l~ 390 (390)
T 3b8x_A 369 LFVGNHQIELFDEIDYLREVLK 390 (390)
T ss_dssp EEEECCSSCCHHHHHHHHHHTC
T ss_pred EEeeCCCCCCHHHHHHHHHhhC
Confidence 9999999999999999998873
No 141
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.89 E-value=4.3e-23 Score=209.39 Aligned_cols=336 Identities=9% Similarity=0.032 Sum_probs=201.3
Q ss_pred CCce-eecCCCCCCcHHHHHHHHHHhhhccCC-------CC-cccccCCCcHHHHHHHHHHHHHHHHHh------CCCCC
Q 043610 69 DRVF-NFAAGPANLPEKVLLKAQSELYNWRGS-------GM-SVMEMSHRGKEFKSIIEKAESDLRALL------NIPQE 133 (430)
Q Consensus 69 ~~~~-l~~~gp~~~~~~V~~a~~~~~~~~~~~-------g~-s~~~~~~~~~~~~~~~~~~r~~la~l~------g~~~~ 133 (430)
+.++ +|+.|-...++.+.+++.+.+.+...+ +. +....+ +... .-..++|+.+++++ +++++
T Consensus 31 ~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~~~--~g~~~lr~~ia~~l~~~~g~~~~~~ 107 (444)
T 3if2_A 31 DQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMAN-YSNP--QGDSAFIDALVGFFNRHYDWNLTSE 107 (444)
T ss_dssp SSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHS-CCCT--TCCHHHHHHHHHHHHHHHCCCCCGG
T ss_pred chhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhc-cCCC--CCCHHHHHHHHHHHHhhcCCCCCHH
Confidence 5677 777776566777777777766553322 21 110011 1111 11235555555555 44555
Q ss_pred cEEEEEeCcHHHHHHHHHhhcCCCCC--------------cEEEE-eCChhHHHHHH----HHHHhC-CceEEecCCCCc
Q 043610 134 YSVLFLQGGATTQFAAVPLNLCTPND--------------PVDYI-VTGSWGDKAFK----EAQKFC-NPQVIWSGKAEK 193 (430)
Q Consensus 134 ~~vv~~~~gaT~a~~~~~~sl~~~gd--------------~vl~~-~~g~~~~~~~~----~a~~~g-~~~~v~~~~~~~ 193 (430)
+|+++ +|+|++++.++..++++|| +|+++ .+.+.++...- .....| .+..++...+..
T Consensus 108 -~i~~t-~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 185 (444)
T 3if2_A 108 -NIALT-NGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEG 185 (444)
T ss_dssp -GEEEE-SSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEE
T ss_pred -HEEEe-cCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccC
Confidence 77775 7899999999999988887 67654 34444432100 011224 444444421000
Q ss_pred -CCCCCCccccc-----cCCCccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCC-----cc--ccc
Q 043610 194 -YTKIPNFDALE-----QNPDAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSK-----PV--DVT 254 (430)
Q Consensus 194 -~g~~~d~~~l~-----i~~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~-----~i--dl~ 254 (430)
++..+|+++|+ +++++++|++++++|+||.++| + |.++ +++|+++|+|++|+.+.. +. +..
T Consensus 186 ~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 265 (444)
T 3if2_A 186 FFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWD 265 (444)
T ss_dssp EEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCC
T ss_pred ccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCC
Confidence 01236887776 3788999999999999999999 3 4443 589999999999874321 11 122
Q ss_pred cccEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHH-H
Q 043610 255 RFGVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLN-E 331 (430)
Q Consensus 255 ~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~-~ 331 (430)
+.++++.|++|+ +++| +|+++.++++++.+.... . . ...+++...+.++..+++......... .
T Consensus 266 ~~~i~~~S~sK~-~~~G~r~G~~~~~~~l~~~~~~~~-------~--~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 332 (444)
T 3if2_A 266 NNTILCFSLSKI-GLPGMRTGIIVADAKVIEAVSAMN-------A--V---VNLAPTRFGAAIATPLVANDRIKQLSDNE 332 (444)
T ss_dssp TTEEEEEESTTT-TCGGGCCEEEECCHHHHHHHHHHH-------H--H---HHSSCCCHHHHHHHHHHHTSHHHHHHHHT
T ss_pred CCEEEEechhhc-cCCCCceEEEEECHHHHHHHHHHH-------H--h---ccCCCChHHHHHHHHHHHcCchhHHHHHH
Confidence 345889999997 5445 888988988877642200 0 0 002334455555555554211000112 2
Q ss_pred HHHHHHHHHHHHHHHHHcc-C--CceecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCCC---------
Q 043610 332 VEKMNRKKAELLYNVIDGS-N--GFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHRS--------- 398 (430)
Q Consensus 332 v~~~~~~l~~~l~~~l~~~-~--G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~~--------- 398 (430)
+.++++++++.+.+.|.+. . ++.+.. + . ....+.+.++..+.+. ++.+.|.++||.+.+|...
T Consensus 333 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~--~-~-~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~ 408 (444)
T 3if2_A 333 IKPFYQKQATLAVKLLKQALGDYPLMIHK--P-E-GAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDY 408 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSSSSEEEEC--C-C-BSSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCceEec--C-C-ccEEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCccc
Confidence 5566677777777777652 2 444432 1 1 2234556666422333 7999999999998765321
Q ss_pred ---CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 399 ---VGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 399 ---~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
.++||||++. ++++|+++++.|++++++
T Consensus 409 ~~~~~~iRis~~~--~~e~i~~~l~~l~~~~~~ 439 (444)
T 3if2_A 409 QHAHECIRMSIAA--DEQTLIDGIKVIGEVVRE 439 (444)
T ss_dssp SGGGSEEEEESSS--CHHHHHHHHHHHHHHHHH
T ss_pred ccCCCeEEEEEeC--CHHHHHHHHHHHHHHHHH
Confidence 2579999997 999999999999998764
No 142
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.89 E-value=1.6e-21 Score=192.98 Aligned_cols=311 Identities=12% Similarity=0.084 Sum_probs=204.8
Q ss_pred CCceeecCC----CCC-CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH
Q 043610 69 DRVFNFAAG----PAN-LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA 143 (430)
Q Consensus 69 ~~~~l~~~g----p~~-~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga 143 (430)
+..++|+.| +.. .++.+++++.+.+.++. .... .+.. ....++++.+++++|.+ + +++++ +|+
T Consensus 28 ~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~-~~~~-----~y~~---~~~~~l~~~la~~~g~~-~-~v~~~-~g~ 95 (375)
T 2eh6_A 28 KEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLL-HVSN-----LYEN---PWQEELAHKLVKHFWTE-G-KVFFA-NSG 95 (375)
T ss_dssp CEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCS-CCCT-----TBCC---HHHHHHHHHHHHTSSSC-E-EEEEE-SSH
T ss_pred CEEEEcCCcccccccCCCCHHHHHHHHHHHHhcc-ccCc-----ccCC---HHHHHHHHHHHhhcCCC-C-eEEEe-Cch
Confidence 345556544 223 68899999999886531 1111 1111 23457889999999984 3 77765 789
Q ss_pred HHHHHHHHhh---cC---CCC-CcEEEEeCChhHHHHHHHHHHhC-Cce----EEecCCCCcCC--CCCCccccc--cCC
Q 043610 144 TTQFAAVPLN---LC---TPN-DPVDYIVTGSWGDKAFKEAQKFC-NPQ----VIWSGKAEKYT--KIPNFDALE--QNP 207 (430)
Q Consensus 144 T~a~~~~~~s---l~---~~g-d~vl~~~~g~~~~~~~~~a~~~g-~~~----~v~~~~~~~~g--~~~d~~~l~--i~~ 207 (430)
+++++.++.. +. +|| |+|++..+++.+... .+...+ ... ..+... +.. ..+|+++++ +++
T Consensus 96 t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~l~~ 171 (375)
T 2eh6_A 96 TESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTY--GSLSATGQPKFHKGFEPLVP--GFSYAKLNDIDSVYKLLDE 171 (375)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSH--HHHHHCBCGGGTTTTCSCCS--SEEEECTTCHHHHHTTCCT
T ss_pred HHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCch--hhhhhcCCccccCCCCCCCC--CceeCCCchHHHHHHHhcC
Confidence 9999988764 34 678 899988776555322 122222 211 001100 000 014677776 678
Q ss_pred CccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCCc--ccccc----ccEEEeCCCcccc-CCcc
Q 043610 208 DAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSKP--VDVTR----FGVIYAGAQKNVG-PSGV 272 (430)
Q Consensus 208 ~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~~--idl~~----~d~~~~s~~K~~g-p~G~ 272 (430)
++++|++++++|+||.+.| +|.++ +++|+++++|++|+ +|..+ ++++. .|++++| |++| +.++
T Consensus 172 ~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~s~S--K~~~~g~~~ 249 (375)
T 2eh6_A 172 ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALA--KGLGGGVPI 249 (375)
T ss_dssp TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSCC
T ss_pred CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEEEEc--ccccCCCCe
Confidence 8999999999999999965 34444 58999999999998 76543 33433 3566544 9996 5669
Q ss_pred EEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCC
Q 043610 273 TIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNG 352 (430)
Q Consensus 273 g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G 352 (430)
|++++++++++.+.+.. .+...++ +...+.++..+|+.+. ...++.+++++++++.|++ .+
T Consensus 250 G~~~~~~~~~~~~~~~~-----------~~~~~~~-~~~~~~~~~~~l~~~~------~~~~~~~~~~~~l~~~L~~-~~ 310 (375)
T 2eh6_A 250 GAILAREEVAQSFTPGS-----------HGSTFGG-NPLACRAGTVVVDEVE------KLLPHVREVGNYFKEKLKE-LG 310 (375)
T ss_dssp EEEEEEHHHHTTCCTTS-----------CCCSSTT-CHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHH-TT
T ss_pred EEEEEcHHHHhhhcCCC-----------CCCCCCC-CHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHH-Hh
Confidence 99999998877654310 0112233 4555666666776532 6788888999999999986 44
Q ss_pred ceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610 353 FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF 425 (430)
Q Consensus 353 ~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~ 425 (430)
....+ ..+ ..+.+.+++ . ..++.+.|.++||.+.++. .+++||+++.+++++|+++++++|+++
T Consensus 311 ~~~~~----~~g-~~~~~~~~~-~-~~~~~~~l~~~gi~~~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 311 KGKVK----GRG-LMLGLELER-E-CKDYVLKALEKGLLINCTA--GKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp SSEEE----EET-TEEEEECSS-C-CHHHHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred cCCce----EEE-EEEEEEEcC-c-HHHHHHHHHHCCCEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 32221 122 356677764 1 3478889988999887542 457999999889999999999999875
No 143
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.89 E-value=5.5e-22 Score=198.05 Aligned_cols=321 Identities=10% Similarity=0.043 Sum_probs=210.9
Q ss_pred CCceeecCC----C-CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH
Q 043610 69 DRVFNFAAG----P-ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA 143 (430)
Q Consensus 69 ~~~~l~~~g----p-~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga 143 (430)
+..++++.| + +..++.|++++.+.+.++. .+.. .+ .....+++++.+++++|.+.+ +++++ +|+
T Consensus 45 ~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~-~~~~-----~~---~~~~~~~l~~~la~~~~~~~~-~v~~~-~gg 113 (395)
T 1vef_A 45 NEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLM-AMPQ-----TL---PTPMRGEFYRTLTAILPPELN-RVFPV-NSG 113 (395)
T ss_dssp CEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCC-CCCT-----TS---CCHHHHHHHHHHHHTSCTTEE-EEEEE-SSH
T ss_pred CEEEEccCccccccCCCCCHHHHHHHHHHHHhCC-CCcc-----cc---CCHHHHHHHHHHHHhcCCCcC-EEEEc-CcH
Confidence 334555443 3 3478999999999886532 1111 11 124567899999999987654 67665 789
Q ss_pred HHHHHHHHhhcC--CCCCcEEEEeCChhHHHHHHHHHHhC-Cce---EEecCCCCcCCCCCCccccc--cCCCccEEEEe
Q 043610 144 TTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQ---VIWSGKAEKYTKIPNFDALE--QNPDAKYLHIC 215 (430)
Q Consensus 144 T~a~~~~~~sl~--~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~---~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~ 215 (430)
++|+..++..+. .+||+|++....+.+... ......| +.. .++...+...-...|+++++ +++++++|+++
T Consensus 114 ~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~-~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~ 192 (395)
T 1vef_A 114 TEANEAALKFARAHTGRKKFVAAMRGFSGRTM-GSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILE 192 (395)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEETTCCCCSSH-HHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEcCCcCCCch-hhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEe
Confidence 999999887763 578898887765543211 1122223 211 01111000000024677777 67889999998
Q ss_pred ecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC----cccccc--ccEEEeCCCcccc-CCccEEEEEcHH
Q 043610 216 ANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK----PVDVTR--FGVIYAGAQKNVG-PSGVTIVIVRKD 280 (430)
Q Consensus 216 ~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~----~idl~~--~d~~~~s~~K~~g-p~G~g~l~v~~~ 280 (430)
+++++||.+.| +|.++ +++|+++++|++|+ ++.. +++... .|++ +++|+++ +.++|+++++++
T Consensus 193 ~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~g~~~G~~~~~~~ 270 (395)
T 1vef_A 193 PVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL--TLAKALGGGVPLGVAVMREE 270 (395)
T ss_dssp SEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGTTSSCEEEEEEHH
T ss_pred CccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE--EEcccccCCCceEEEEehHH
Confidence 88889998765 34454 58999999999998 5422 223222 2555 6699996 456999999999
Q ss_pred HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC
Q 043610 281 LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK 360 (430)
Q Consensus 281 ~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~ 360 (430)
+++.+.+. . . ....+++...++++..+++.+.+ +.+.++.+++++++++.|++ .+..++. ..
T Consensus 271 ~~~~l~~~-~----------~-~~~~~~~~~~~~a~~~al~~~~~----~~~~~~~~~~~~~l~~~l~~-~~~~~~~-~~ 332 (395)
T 1vef_A 271 VARSMPKG-G----------H-GTTFGGNPLAMAAGVAAIRYLER----TRLWERAAELGPWFMEKLRA-IPSPKIR-EV 332 (395)
T ss_dssp HHHTSCTT-S----------S-CCSSTTCHHHHHHHHHHHHHHHH----HTTHHHHHHHHHHHHHHHHT-SCCTTEE-EE
T ss_pred HHhhhccC-C----------c-CCCcCCCHHHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHHHH-hhcCceE-EE
Confidence 87765321 0 0 11235677888888889987653 35678888999999999986 4432111 00
Q ss_pred CCCccceEEEEcCCCchhHHHHHHHH-HcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610 361 SVRSFMNVPFTLEKSDLEAEFVKEAA-KEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 361 ~~rs~~iv~f~~~~~~~~~~~~~~L~-~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~ 426 (430)
...+ ..+.+.+++ . ..++.+.|. ++||.+.++. .+++||+++.+++++|+++++++|++++
T Consensus 333 ~~~g-~~~~~~~~~-~-~~~l~~~l~~~~gi~v~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 333 RGMG-LMVGLELKE-K-AAPYIARLEKEHRVLALQAG--PTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp EEET-TEEEEEESS-C-SHHHHHHHHHHHCEECEESS--TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEE-EEEEEEEcC-h-HHHHHHHHHHHCCeEEecCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 1122 456677764 2 347889998 8999987642 4589999998899999999999999876
No 144
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.88 E-value=6.8e-21 Score=192.32 Aligned_cols=319 Identities=9% Similarity=0.001 Sum_probs=207.0
Q ss_pred CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCC
Q 043610 79 ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPN 158 (430)
Q Consensus 79 ~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~g 158 (430)
.+.|+.+++++.+.+.. + .+.. ....+.++|+.+++++|.+ +++++ +|+|++++.++.++. +|
T Consensus 28 ~~~p~~~~~a~~~~~~~----~-------~y~~-~~~~~~~l~~~la~~~~~~---~v~~~-~ggt~al~~~l~~l~-~g 90 (424)
T 2po3_A 28 RIDRARLYERLDRALDS----Q-------WLSN-GGPLVREFEERVAGLAGVR---HAVAT-CNATAGLQLLAHAAG-LT 90 (424)
T ss_dssp CCCHHHHHHHHHHHHHH----T-------CCSS-SCHHHHHHHHHHHHHHTSS---EEEEE-SCHHHHHHHHHHHHT-CC
T ss_pred CCChHHHHHHHHHHHhc----C-------Cccc-CCHHHHHHHHHHHHHhCCC---eEEEe-CCHHHHHHHHHHHcC-CC
Confidence 45577999999887753 1 1111 1134568899999999984 67765 789999999998884 78
Q ss_pred CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-c
Q 043610 159 DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-K 232 (430)
Q Consensus 159 d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~ 232 (430)
|+|++..+++.+.. ..++..| +++.++..+ .+..+|+++++ +++++++|+++| ++|...+ +|.++ +
T Consensus 91 d~Vlv~~~~~~~~~--~~~~~~G~~~~~v~~~~---~~~~~d~~~l~~~i~~~~~~v~~~~---~tG~~~~l~~i~~la~ 162 (424)
T 2po3_A 91 GEVIMPSMTFAATP--HALRWIGLTPVFADIDP---DTGNLDPDQVAAAVTPRTSAVVGVH---LWGRPCAADQLRKVAD 162 (424)
T ss_dssp SEEEEESSSCTHHH--HHHHHTTCEEEEECBCT---TTSSBCHHHHGGGCCTTEEEEEEEC---GGGCCCCHHHHHHHHH
T ss_pred CEEEECCCccHHHH--HHHHHcCCEEEEEecCC---CcCCcCHHHHHHhhCcCCcEEEEEC---CCCCcCCHHHHHHHHH
Confidence 99998887777653 3455667 777777643 12347888887 678899999875 7899888 78886 6
Q ss_pred CCCcEEEEeccCcCCCCc--cccccc-cEEEeCCC--ccccCCccEEEEEc-HHHHhccCCCCCccccccchhhcCCCCC
Q 043610 233 NSTGILVADMSSNFCSKP--VDVTRF-GVIYAGAQ--KNVGPSGVTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYN 306 (430)
Q Consensus 233 ~~g~~lvvD~a~s~G~~~--idl~~~-d~~~~s~~--K~~gp~G~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 306 (430)
++|+++++|++|++|... ..+..+ |+++.|+| |++++...|+++.+ +++++.+.+.... .+.. .......+
T Consensus 163 ~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~--~~~~-~~~~~~~g 239 (424)
T 2po3_A 163 EHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNF--GFDL-PGGSPAGG 239 (424)
T ss_dssp HTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBT--TTTC-TTCCTTCC
T ss_pred HcCCEEEEECccccCCeECCeecccccCEEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhc--Cccc-cccccccC
Confidence 899999999999976641 122222 68888877 88876446999988 7776654321000 0000 00000111
Q ss_pred CccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC-CCCCCccceEEEEcCC---CchhHHHH
Q 043610 307 TPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV-EKSVRSFMNVPFTLEK---SDLEAEFV 382 (430)
Q Consensus 307 T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~-~~~~rs~~iv~f~~~~---~~~~~~~~ 382 (430)
+.......++..++..+. +++.+.++..++++++++.|.+..|+.+... +.......++.+.+++ .....++.
T Consensus 240 ~~~~~~~~~aa~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 316 (424)
T 2po3_A 240 TNAKMSEAAAAMGLTSLD---AFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVM 316 (424)
T ss_dssp CBCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHH
T ss_pred cCCCcCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCccchhhHHHHH
Confidence 110011122223333222 4677888899999999999987558877531 1111222355566652 11123788
Q ss_pred HHHHHcCCeecCCCC-C---------C------C-------eeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 383 KEAAKEKMVQLKGHR-S---------V------G-------GMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 383 ~~L~~~Gi~~~~g~~-~---------~------g-------~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
+.|.++||.+.+... . . + .||++++.+++++|+++++++|++++++
T Consensus 317 ~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~ 385 (424)
T 2po3_A 317 EVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCATR 385 (424)
T ss_dssp HHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 899999998754211 0 0 1 1888888999999999999999988753
No 145
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.88 E-value=1.4e-21 Score=197.15 Aligned_cols=278 Identities=13% Similarity=0.013 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCC
Q 043610 115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKA 191 (430)
Q Consensus 115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~ 191 (430)
...+++++.+++++|.+ +++++ +|+++|++.++.+++++||+|++....+.+.. +...+++.| ++..++.
T Consensus 82 p~~~~le~~lA~l~g~~---~~i~~-ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~--- 154 (415)
T 2fq6_A 82 LTHFSLQQAMCELEGGA---GCVLF-PCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDP--- 154 (415)
T ss_dssp HHHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECT---
T ss_pred chHHHHHHHHHHHhCCC---eEEEe-CCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECC---
Confidence 34568899999999985 34555 67899999999999999999998777666543 112234567 6655543
Q ss_pred CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cC--CCcEEEEeccCcCC--CCccccccccEEEeC
Q 043610 192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KN--STGILVADMSSNFC--SKPVDVTRFGVIYAG 262 (430)
Q Consensus 192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~--~g~~lvvD~a~s~G--~~~idl~~~d~~~~s 262 (430)
.|+++++ ++++|++|++++++|++|.++| +|.++ ++ +|+++++|++|+.+ ..|+++ ..|+++.|
T Consensus 155 ------~d~~~le~ai~~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~~~-g~Div~~S 227 (415)
T 2fq6_A 155 ------LIGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDF-GIDVSIQA 227 (415)
T ss_dssp ------TCGGGGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGGGG-TCSEEEEE
T ss_pred ------CCHHHHHHhhccCCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCCcccc-CCeEEEEe
Confidence 2567777 7889999999999999999999 78886 68 99999999999855 445543 34899999
Q ss_pred CCccccCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043610 263 AQKNVGPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKK 339 (430)
Q Consensus 263 ~~K~~gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l 339 (430)
+||++|++| .|+++.++++++.+.. +. .. ..++.+....+.+..+++. +....++..+.
T Consensus 228 ~sK~lg~~g~~~~G~l~~~~~~~~~l~~-------~~---~~--~G~~~~~~~a~~~~~~l~~------l~~r~~~~~~n 289 (415)
T 2fq6_A 228 ATKYLVGHSDAMIGTAVCNARCWEQLRE-------NA---YL--MGQMVDADTAYITSRGLRT------LGVRLRQHHES 289 (415)
T ss_dssp TTTTTTCSSSCCCEEEEECTTTHHHHHH-------HH---HH--TTCCCCHHHHHHHHHHHHH------HHHHHHHHHHH
T ss_pred CccccCCCCCceEEEEEeCHHHHHHHHH-------HH---Hh--cCCCCCHHHHHHHHhhhhH------HHHHHHHHHHH
Confidence 999998766 6999998876654321 10 00 1123333334444444543 23455566667
Q ss_pred HHHHHHHHHccCCcee--cCC---CCC--------CCccceEEEEcCCC-ch-hH-HHHHHHHHcCCeecCC-------C
Q 043610 340 AELLYNVIDGSNGFYK--CPV---EKS--------VRSFMNVPFTLEKS-DL-EA-EFVKEAAKEKMVQLKG-------H 396 (430)
Q Consensus 340 ~~~l~~~l~~~~G~~~--~~~---~~~--------~rs~~iv~f~~~~~-~~-~~-~~~~~L~~~Gi~~~~g-------~ 396 (430)
+..+.+.|.+.+++.- ++. .+. ...+.+++|.+++. .. +. .|+..|...++.+..| +
T Consensus 290 ~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~~s~~~~ 369 (415)
T 2fq6_A 290 SLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILA 369 (415)
T ss_dssp HHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECSCCCSSSCEEEE
T ss_pred HHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEeccCCCCceeEEe
Confidence 7778888876433332 221 110 12356889999752 11 12 3444443222222111 0
Q ss_pred ----------------CCCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610 397 ----------------RSVGGMRASIYNAMPLAGVEKLVAFMKD 424 (430)
Q Consensus 397 ----------------~~~g~iRis~~~~~t~edv~~ll~~L~~ 424 (430)
...+.||+|++..+++++|+.+.++|++
T Consensus 370 ~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 370 NQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp ECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred cCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 0135799999999999999999999875
No 146
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.88 E-value=5.5e-22 Score=198.78 Aligned_cols=314 Identities=10% Similarity=0.017 Sum_probs=199.4
Q ss_pred eecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHh
Q 043610 73 NFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPL 152 (430)
Q Consensus 73 l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~ 152 (430)
.+...|....+.+.+++.. +. .+.+.+..+.. .....+++++.+++++|.+ +++++ +||+++++.++.
T Consensus 30 ~d~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~---~~~~~~~l~~~la~~~g~~---~~i~~-~sG~~a~~~~l~ 97 (398)
T 2rfv_A 30 PIFQTSTFVFDSAEQGAAR-FA----LEESGYIYTRL---GNPTTDALEKKLAVLERGE---AGLAT-ASGISAITTTLL 97 (398)
T ss_dssp CCCCCSBCCCSSHHHHHHH-C---------CCSBTTT---CCHHHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHH
T ss_pred CCcCCCccccCCHHHHHHh-hc----CCCCCCceeCC---CChHHHHHHHHHHHHhCCC---cEEEE-CCHHHHHHHHHH
Confidence 3445555666667776652 11 11111111111 1245678999999999986 45665 467899999999
Q ss_pred hcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC-
Q 043610 153 NLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK- 226 (430)
Q Consensus 153 sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p- 226 (430)
+++++||+|++..+.|.+.. +...++..| +++.++. .|+++++ +++++++|++++++|+||.+.|
T Consensus 98 ~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l 168 (398)
T 2rfv_A 98 TLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDA---------AKPEEIRAAMRPETKVVYIETPANPTLSLVDI 168 (398)
T ss_dssp HHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECT---------TSHHHHHHHCCTTEEEEEEESSBTTTTBCCCH
T ss_pred HHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCC---------CCHHHHHHhcCCCCeEEEEECCCCCCCcccCH
Confidence 99899999998877666542 111235567 6555543 2567776 7789999999999999999999
Q ss_pred -CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCcccc-CCc--cEEEEEcHHHHh-ccCCCCCccccccchh
Q 043610 227 -EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQKNVG-PSG--VTIVIVRKDLLG-NAQDKTPLMLDYKIHD 299 (430)
Q Consensus 227 -ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K~~g-p~G--~g~l~v~~~~~~-~~~~~~p~~~~~~~~~ 299 (430)
+|.++ +++|+++++|++|+.+..+..+. ..|+++.|+||+++ |.+ .|+++++++.++ .+.+ +.
T Consensus 169 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~----~~------ 238 (398)
T 2rfv_A 169 ETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFV----GL------ 238 (398)
T ss_dssp HHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHT----HH------
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHH----HH------
Confidence 78886 68999999999999776532221 24799999999996 555 499999998876 3321 00
Q ss_pred hcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC--------------CceecCCCCCCCcc
Q 043610 300 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN--------------GFYKCPVEKSVRSF 365 (430)
Q Consensus 300 ~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~--------------G~~~~~~~~~~rs~ 365 (430)
.. ...++.+...++++..+++.+ +...++..+..+.+.+.|.+.. ++++..... ....
T Consensus 239 ~~-~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~-~~~g 310 (398)
T 2rfv_A 239 KD-ITGGCMSPFNAWLTLRGVKTL------GIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQM-SLPG 310 (398)
T ss_dssp HH-TTCCCCCHHHHHHHHHHHTTH------HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHC-SSCC
T ss_pred Hh-CCCCCCCHHHHHHHHhhhhhH------HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhC-CCCc
Confidence 00 012467777777777777533 3334445556666677776521 111111000 1123
Q ss_pred ceEEEEcCCCchhH-HHHHHHHHcCCeecCCCC-------------------------CCCeeEEeecCCCCHHHHHHHH
Q 043610 366 MNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHR-------------------------SVGGMRASIYNAMPLAGVEKLV 419 (430)
Q Consensus 366 ~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~-------------------------~~g~iRis~~~~~t~edv~~ll 419 (430)
.++.|.+++...+. ++.+++...|+.+..|.. ..+.+|+|++..++++++++++
T Consensus 311 ~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~ 390 (398)
T 2rfv_A 311 GIISFEIAGGLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLE 390 (398)
T ss_dssp SEEEEEETTHHHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHH
T ss_pred eEEEEEEcCCHHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHH
Confidence 56778887411111 233333333555443410 1468999999999999999999
Q ss_pred HHHHHH
Q 043610 420 AFMKDF 425 (430)
Q Consensus 420 ~~L~~~ 425 (430)
++|+++
T Consensus 391 ~al~~~ 396 (398)
T 2rfv_A 391 HAIRKA 396 (398)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 999864
No 147
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.88 E-value=1.6e-21 Score=208.63 Aligned_cols=300 Identities=11% Similarity=-0.001 Sum_probs=209.5
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcC
Q 043610 116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKY 194 (430)
Q Consensus 116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~ 194 (430)
.++++++.+|+++|++. . +++++|+|+++.+++.+++++||+|++..+.|.+.... .++..| +++.++...+ ++
T Consensus 174 ~i~e~e~~lA~~~gae~--~-i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~-~~~l~Ga~~v~v~~~~~-~~ 248 (730)
T 1c4k_A 174 PAVAAEKHAARVYNADK--T-YFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNS-ALAMAGGRPVYLQTNRN-PY 248 (730)
T ss_dssp HHHHHHHHHHHHTTCSE--E-EEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH-HTTTTCCEEEEECEEEC-TT
T ss_pred HHHHHHHHHHHHHCCCc--E-EEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHH-HHHHCCCEEEEEeCCcc-cc
Confidence 57899999999999974 4 55668888999999999999999999888887765321 134456 6666654321 23
Q ss_pred C--CCCCcccc-----c--cCCC------c----cEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCC----C
Q 043610 195 T--KIPNFDAL-----E--QNPD------A----KYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFC----S 248 (430)
Q Consensus 195 g--~~~d~~~l-----~--i~~~------~----~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G----~ 248 (430)
+ ..+|++++ + +.++ + ++|+++++ |++|.+.| +|.++ +++|+++++|++|+.+ .
T Consensus 249 ~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~ 327 (730)
T 1c4k_A 249 GFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIP 327 (730)
T ss_dssp CCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSG
T ss_pred CccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccCc
Confidence 2 13677888 6 5554 5 89999886 68999999 78886 7899999999998632 1
Q ss_pred -----Cccccc--ccc----EEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCccccccchhh--cCCCCCCccHHHHH
Q 043610 249 -----KPVDVT--RFG----VIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDE--NNSLYNTPPCYCIY 314 (430)
Q Consensus 249 -----~~idl~--~~d----~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~T~~~~~~~ 314 (430)
.+++++ ..| +++.|+||+++ |.|.|+++++++.+..- ..+.+.....+ .....++|+...+.
T Consensus 328 ~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g~----~~~i~~~~~~~~~~~~~stsp~~~~ia 403 (730)
T 1c4k_A 328 MMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQ----LRYCDHKHFNNSFNLFMSTSPFYPMYA 403 (730)
T ss_dssp GGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTTS----TTCCCHHHHHHHHHHHSCSSCCHHHHH
T ss_pred ccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcCc----ccccCHHHHHHHHHHhCCCCCcHHHHH
Confidence 123332 235 89999999995 88889999988765210 01111100000 01123688999999
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-cCCceecCCCC--------------------------------C
Q 043610 315 MCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-SNGFYKCPVEK--------------------------------S 361 (430)
Q Consensus 315 a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~~~~~~--------------------------------~ 361 (430)
++..|++++...+| ++..++..++++++++.|.+ .+|++++..+. .
T Consensus 404 al~aA~~~l~~~~g-~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 482 (730)
T 1c4k_A 404 ALDVNAAMQEGEAG-RKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYE 482 (730)
T ss_dssp HHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCT
T ss_pred HHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhcccc
Confidence 99999987764233 55678889999999999987 57888763211 0
Q ss_pred -C-C-----ccceEEEEcCC----------CchhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHH
Q 043610 362 -V-R-----SFMNVPFTLEK----------SDLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMK 423 (430)
Q Consensus 362 -~-r-----s~~iv~f~~~~----------~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~ 423 (430)
. . .++.++|..++ .+.+. ++.+.|.++||.+... ..+.+|++++..+|++|+++++++|+
T Consensus 483 ~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~--~~~~ir~~~s~g~t~e~i~~Ll~aL~ 560 (730)
T 1c4k_A 483 GYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKS--DLNSILFLMTPAETPAKMNNLITQLL 560 (730)
T ss_dssp TCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEE--CSSEEEEECCTTCCHHHHHHHHHHHH
T ss_pred ccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEEC--CCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 0 0 13346777752 12344 6888999999987431 23579999999999999999999999
Q ss_pred HHHHh
Q 043610 424 DFQAK 428 (430)
Q Consensus 424 ~~~~~ 428 (430)
++.+.
T Consensus 561 ~i~~~ 565 (730)
T 1c4k_A 561 QLQRL 565 (730)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88653
No 148
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.88 E-value=2.3e-21 Score=193.38 Aligned_cols=318 Identities=11% Similarity=0.040 Sum_probs=207.3
Q ss_pred CCCceeecCCC--CC---CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610 68 EDRVFNFAAGP--AN---LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG 142 (430)
Q Consensus 68 ~~~~~l~~~gp--~~---~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g 142 (430)
.++.++|..+. .+ .++.|++++.+.+.+... +.. ... ....+++++.+++++| .+ +++++ +|
T Consensus 35 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~-----~~~---~~~~~~l~~~la~~~g--~~-~v~~~-~~ 101 (392)
T 3ruy_A 35 GNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTL-TSR-----AFH---SDQLGPWYEKVAKLTN--KE-MVLPM-NT 101 (392)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSC-CCT-----TSE---ETTHHHHHHHHHHHHT--CS-EEEEE-SS
T ss_pred CCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhccc-ccc-----ccC---CHHHHHHHHHHHHhcC--CC-EEEEe-Cc
Confidence 34455565543 22 579999999998864311 110 011 1345688899999998 33 67775 78
Q ss_pred HHHHHHHHHhhcCCC----------CCcEEEEeCChhHHHHHHHHHHhC-C-ce---EEecCCC-CcCCCCCCccccc--
Q 043610 143 ATTQFAAVPLNLCTP----------NDPVDYIVTGSWGDKAFKEAQKFC-N-PQ---VIWSGKA-EKYTKIPNFDALE-- 204 (430)
Q Consensus 143 aT~a~~~~~~sl~~~----------gd~vl~~~~g~~~~~~~~~a~~~g-~-~~---~v~~~~~-~~~g~~~d~~~l~-- 204 (430)
++++++.++..+..+ +|+|++....+.+... .+...+ . .. ..+...+ .... ..|+++++
T Consensus 102 gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~l~~~ 178 (392)
T 3ruy_A 102 GAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTM--GAVSMSSNEEYKRGFGPMLPGIIVIP-YGDLEALKAA 178 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSH--HHHHTCSCTTTTTTCCSCCSSEEEEC-TTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCH--hhhhccCChhhccccCCCCCCCeeeC-cccHHHHHHH
Confidence 999999988765432 5688776666544321 111221 1 00 0000000 0011 12667777
Q ss_pred cCCCccEEEEeecCCCccccCC--C-Ccc---c-cCCCcEEEEeccCc-CCCC----ccccccc--cEEEeCCCccccC-
Q 043610 205 QNPDAKYLHICANETIHGVEFK--E-YPS---A-KNSTGILVADMSSN-FCSK----PVDVTRF--GVIYAGAQKNVGP- 269 (430)
Q Consensus 205 i~~~~~lv~i~~~~t~tG~~~p--e-i~~---~-~~~g~~lvvD~a~s-~G~~----~idl~~~--d~~~~s~~K~~gp- 269 (430)
+++++++|++++++|+||.+.| + +.+ + +++|+++++|++|+ +|.. .++.... |++++ +|+++.
T Consensus 179 l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~--SK~l~gG 256 (392)
T 3ruy_A 179 ITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYIL--GKALGGG 256 (392)
T ss_dssp CCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEE--CGGGGTT
T ss_pred hccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEEEE--chhhhCC
Confidence 6789999999999999999997 4 444 3 58999999999985 5431 2222222 56655 599854
Q ss_pred -CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 043610 270 -SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVID 348 (430)
Q Consensus 270 -~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~ 348 (430)
..+|++++++++++.+.+.. . ....+++...+.++..+|+.+.. +.+.++.+++++++++.|+
T Consensus 257 ~~~~G~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~l~~~L~ 320 (392)
T 3ruy_A 257 VFPISCAAANRDILGVFEPGS-----------H-GSTFGGNPLACAVSIAALEVLEE----EKLTERSLQLGEKLVGQLK 320 (392)
T ss_dssp TSCCEEEEECHHHHTTCCTTS-----------S-CCSSTTCHHHHHHHHHHHHHHHH----TTHHHHHHHHHHHHHHHHT
T ss_pred hhhhEEEEECHHHHhhhccCC-----------c-CCCCCCCHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHHH
Confidence 33899999999887653311 0 11236788888889999987643 5788899999999999998
Q ss_pred ccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610 349 GSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 349 ~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~ 426 (430)
+ .+...+...+ ..+ ..+.+.+++ ...++.+.|.++||.+.++. .+.+||+++..++++|+++++++|++++
T Consensus 321 ~-~~~~~~~~~~-~~g-~~~~~~~~~--~~~~l~~~l~~~gi~v~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 321 E-IDNPMITEVR-GKG-LFIGIELNE--PARPYCEQLKAAGLLCKETH--ENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp T-CCCTTEEEEE-EET-TEEEEEESS--CSHHHHHHHHTTTEECCCBT--TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred H-hcCCCceEEE-eee-eEEEEEEcc--hHHHHHHHHHHCCcEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 6 4322111001 122 345666664 23479999999999987753 4689999999999999999999999876
No 149
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.88 E-value=6e-22 Score=197.61 Aligned_cols=318 Identities=12% Similarity=0.020 Sum_probs=201.8
Q ss_pred CCceeecCC-------CCCCcHHHHHHHHH-HhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC------CCCc
Q 043610 69 DRVFNFAAG-------PANLPEKVLLKAQS-ELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI------PQEY 134 (430)
Q Consensus 69 ~~~~l~~~g-------p~~~~~~V~~a~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~------~~~~ 134 (430)
+.+++|+.| +.++++.|++++.+ .+.+....+.. .. .. ..++|+.++++++. +++.
T Consensus 26 ~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~---~~---~g----~~~lr~~la~~~~~~~~~~~~~~~ 95 (397)
T 3fsl_A 26 SDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYL---PM---EG----LNCYRHAIAPLLFGADHPVLKQQR 95 (397)
T ss_dssp SCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCC---CT---TC----CHHHHHHHHHHHHCTTCHHHHTTC
T ss_pred CCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCC---CC---Cc----hHHHHHHHHHHHhcCCcccccccc
Confidence 345666555 45666999999998 76431111111 10 11 23556666666643 2321
Q ss_pred -EEEEEeCcHHHHHHHHH--hhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC--
Q 043610 135 -SVLFLQGGATTQFAAVP--LNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-- 206 (430)
Q Consensus 135 -~vv~~~~gaT~a~~~~~--~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-- 206 (430)
+|++ ++|++++++.++ .+++++||+|++..+++.+. ...++..| +++.++...+ .+..+|+++++ +.
T Consensus 96 ~~i~~-t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~l~~~ 170 (397)
T 3fsl_A 96 VATIQ-TLGGSGALKVGADFLKRYFPESGVWVSDPTWENH--VAIFAGAGFEVSTYPWYDE--ATNGVRFNDLLATLKTL 170 (397)
T ss_dssp EEEEE-ESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHH--HHHHHHTTCCEEEECCEET--TTTEECHHHHHHHHTTC
T ss_pred eEEEE-cCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhH--HHHHHHcCCceEEEeeeec--cCCcCcHHHHHHHHHhC
Confidence 4565 589999999984 55678999999887777664 34566778 8888876321 12247888886 54
Q ss_pred -CCccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCCc-----ccc------ccccEEEeCCCcccc
Q 043610 207 -PDAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSKP-----VDV------TRFGVIYAGAQKNVG 268 (430)
Q Consensus 207 -~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~~-----idl------~~~d~~~~s~~K~~g 268 (430)
++++++++++++|+||.+++ + |.++ +++|+++++|++++..... ..+ .+..+++.|++|.+|
T Consensus 171 ~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 250 (397)
T 3fsl_A 171 QAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFS 250 (397)
T ss_dssp CTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTT
T ss_pred CCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEeccccccc
Confidence 67899999999999999998 3 4444 5899999999998754432 111 112378899999999
Q ss_pred CCc--cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHH--HH--hcCHHHHHHHHHHH
Q 043610 269 PSG--VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYL--LE--LGGLNEVEKMNRKK 339 (430)
Q Consensus 269 p~G--~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l--~~--~~g~~~v~~~~~~l 339 (430)
++| +|++++ +++.++.+... ..... ....++++...+.++..+++.. .. ...++.++++++++
T Consensus 251 ~~G~riG~~~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~ 322 (397)
T 3fsl_A 251 LYGERVGGLSVMCEDAEAAGRVLGQ------LKATV--RRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAM 322 (397)
T ss_dssp CGGGCCEEEEEECSSHHHHHHHHHH------HHHHH--HTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCeeEEEEecCCHHHHHHHHHH------HHHHH--HhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 889 788875 34554432100 00000 0122355666666666555421 00 12467889999999
Q ss_pred HHHHHHHHHccC---CceecCCCCCCCccceEEE-EcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHH
Q 043610 340 AELLYNVIDGSN---GFYKCPVEKSVRSFMNVPF-TLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGV 415 (430)
Q Consensus 340 ~~~l~~~l~~~~---G~~~~~~~~~~rs~~iv~f-~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv 415 (430)
++++++.|.+.. |+.+.. + .. +.+.+ .++ ...+.+.|.++||.+.+|. |||+... ++++|
T Consensus 323 ~~~l~~~L~~~~~~~~~~~~~--~--~~-~~~~~~~~~----~~~~~~~l~~~gi~v~~g~------Ris~~~~-~~~~i 386 (397)
T 3fsl_A 323 RQELVKVLSTEMPERNFDYLL--N--QR-GMFSYTGLS----AAQVDRLREEFGVYLIASG------RMCVAGL-NTANV 386 (397)
T ss_dssp HHHHHHHHHHHCTTSCCTHHH--H--CC-SSEEECCCC----HHHHHHHHHTTCEECCTTC------EEEGGGC-CTTTH
T ss_pred HHHHHHHHHhcCCCCCceeec--C--Cc-eEEEecCCC----HHHHHHHHHhCCEEECCCC------eEEEEec-CHhhH
Confidence 999999998743 555432 1 11 22322 221 2245566788899998753 9998754 45779
Q ss_pred HHHHHHHHHH
Q 043610 416 EKLVAFMKDF 425 (430)
Q Consensus 416 ~~ll~~L~~~ 425 (430)
++++++|+++
T Consensus 387 ~~~~~~l~~~ 396 (397)
T 3fsl_A 387 QRVAKAFAAV 396 (397)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999999875
No 150
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.88 E-value=4.6e-21 Score=193.10 Aligned_cols=283 Identities=12% Similarity=0.027 Sum_probs=187.6
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCC
Q 043610 115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKA 191 (430)
Q Consensus 115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~ 191 (430)
...+++++.+++++|.+ +++++ +|+++|++.++.+++++||+|++....+.+.. +...++..| +++.++.
T Consensus 56 ~~~~~l~~~la~~~g~~---~~~~~-~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--- 128 (412)
T 2cb1_A 56 PTAKALEERLKALEGAL---EAVVL-ASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDP--- 128 (412)
T ss_dssp HHHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECS---
T ss_pred hHHHHHHHHHHHHhCCC---cEEEE-CCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC---
Confidence 34678999999999985 57765 78999999999998899999998777665432 211133456 5554432
Q ss_pred CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC---ccccccccEEEeCC
Q 043610 192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK---PVDVTRFGVIYAGA 263 (430)
Q Consensus 192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~---~idl~~~d~~~~s~ 263 (430)
|+++++ +++++++|++++++|++|.+.| +|.++ +++|+++++|++|+.+.. +++. ..|++++|+
T Consensus 129 -------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~-~~di~~~S~ 200 (412)
T 2cb1_A 129 -------EPEAVREALSAKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALCRPLAW-GAHVVVESL 200 (412)
T ss_dssp -------SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGGG-TCSEEEEET
T ss_pred -------CHHHHHHHhccCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccCCcccc-CCeEEEECC
Confidence 356776 7889999999999999999999 78886 689999999999997732 3322 348999999
Q ss_pred Ccccc-CCc-cEEEEEcHHHHh-----ccCCCCCccc-----------cccchhhcC--CCCC-CccHHHHHHHHHHHHH
Q 043610 264 QKNVG-PSG-VTIVIVRKDLLG-----NAQDKTPLML-----------DYKIHDENN--SLYN-TPPCYCIYMCGLVFEY 322 (430)
Q Consensus 264 ~K~~g-p~G-~g~l~v~~~~~~-----~~~~~~p~~~-----------~~~~~~~~~--~~~~-T~~~~~~~a~~~al~~ 322 (430)
||+++ |.| +|++++.++.+. .+.+ |... ++....+.+ ...| +.+....+.+...++
T Consensus 201 ~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~- 277 (412)
T 2cb1_A 201 TKWASGHGSVLGGAVLSRETELWRNYPQFLQ--PDLKGQIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLE- 277 (412)
T ss_dssp TTTTTCSSCCCCEEEEECCCSGGGGSGGGGC--C-------HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGG-
T ss_pred cccccCCCCcEEEEEEecccccccccccccc--ccccccchhhccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCc-
Confidence 99995 666 788887652211 0100 1000 000000110 1112 223333332223333
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec--CCCCC-----------CCccceEEEEcCCCchhHHHHHHHHHcC
Q 043610 323 LLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC--PVEKS-----------VRSFMNVPFTLEKSDLEAEFVKEAAKEK 389 (430)
Q Consensus 323 l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~--~~~~~-----------~rs~~iv~f~~~~~~~~~~~~~~L~~~G 389 (430)
.++...++..++++++.++|.+..++..+ +..+. .....+++|.+ + + ..++.+.|.+.|
T Consensus 278 -----~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~-~-~~~~~~~l~~~~ 349 (412)
T 2cb1_A 278 -----TVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-G-D-LERASRFLGAIR 349 (412)
T ss_dssp -----GHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-S-S-HHHHHHHHHHCS
T ss_pred -----hHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-C-C-HHHHHHHHHhCC
Confidence 34556667778899999999876677643 21110 12346788998 4 2 235677788889
Q ss_pred CeecCCC----------C------------------CCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610 390 MVQLKGH----------R------------------SVGGMRASIYNAMPLAGVEKLVAFMKD 424 (430)
Q Consensus 390 i~~~~g~----------~------------------~~g~iRis~~~~~t~edv~~ll~~L~~ 424 (430)
|.+ .+. . ..+.||+|++.++++++|++++++|++
T Consensus 350 i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 350 LLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp SEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred eee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 887 441 1 036799999999999999999999875
No 151
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.87 E-value=1.2e-21 Score=196.97 Aligned_cols=325 Identities=12% Similarity=0.043 Sum_probs=204.4
Q ss_pred CceeecCC-------CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610 70 RVFNFAAG-------PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG 142 (430)
Q Consensus 70 ~~~l~~~g-------p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g 142 (430)
++++|+.| +.++++.|.+++.+.... ...+. .. .....+..+++.+.+....+.....++++ ++|
T Consensus 38 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~Y---~~---~~g~~~lr~~la~~~~~~~~~~~~~~i~~-t~g 109 (413)
T 3t18_A 38 AVINAALGTLLDDKGKIIALPSVYDRLDEMDRS-HIASY---AP---IEGEKDYRKIVIDTLFGPYKPEGYISAIA-TPG 109 (413)
T ss_dssp GCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHH-HHHSC---CC---TTCCHHHHHHHHHHHHGGGCCSSEEEEEE-ESH
T ss_pred ceEeccccCccCCCCCcCChHHHHHHHHhcCcc-cccCc---CC---CCCCHHHHHHHHHHHhcccCccccCcEEE-cCc
Confidence 45666555 567888998887663321 00011 01 11122223333343433333322215665 589
Q ss_pred HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC----Ccc-EEEE
Q 043610 143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP----DAK-YLHI 214 (430)
Q Consensus 143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~----~~~-lv~i 214 (430)
+++++..++..++++||+|++..+.+.++. ..++..| +++.++...+ ++ .+|+++++ +.+ +++ ++++
T Consensus 110 ~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~-~~--~~d~~~l~~~l~~~~~~~~~~~vi~ 184 (413)
T 3t18_A 110 GTGAIRSAIFSYLDEGDPLICHDYYWAPYR--KICEEFGRNFKTFEFFTD-DF--AFNIDVYKEAIDEGIRDSDRIASLI 184 (413)
T ss_dssp HHHHHHHHHHHHCCSSCEEEEESSCCTHHH--HHHHHHTCEEEEECCBCT-TS--SBCHHHHHHHHHHHHHHCSEEEEEE
T ss_pred cHHHHHHHHHHhcCCCCEEEECCCCcccHH--HHHHHhCCeEEEeeccCC-CC--CcCHHHHHHHHHHHhhcCCCEEEEE
Confidence 999999999999999999998877665543 3456677 7777776332 22 46888886 543 677 7888
Q ss_pred eec-CCCccccCC--CCccc----c------CCCcEEEEeccCc-CCCC-----cc--ccccc--c---EEEeCCCcccc
Q 043610 215 CAN-ETIHGVEFK--EYPSA----K------NSTGILVADMSSN-FCSK-----PV--DVTRF--G---VIYAGAQKNVG 268 (430)
Q Consensus 215 ~~~-~t~tG~~~p--ei~~~----~------~~g~~lvvD~a~s-~G~~-----~i--dl~~~--d---~~~~s~~K~~g 268 (430)
+++ +||||.+.| ++.++ + ++|+++++|+++. ++.. ++ ....+ + +++.|++|.+|
T Consensus 185 ~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 264 (413)
T 3t18_A 185 NSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHT 264 (413)
T ss_dssp ECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTT
T ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCC
Confidence 888 999999999 44443 3 7999999999964 2221 11 11112 2 67789999999
Q ss_pred CCc--cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH---HhcCHHHHHHHHHHHH
Q 043610 269 PSG--VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL---ELGGLNEVEKMNRKKA 340 (430)
Q Consensus 269 p~G--~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~---~~~g~~~v~~~~~~l~ 340 (430)
++| +|++++ ++++++.+..... +. . ...+++++...+.++..+++... -...++.+++++++++
T Consensus 265 ~~G~riG~~~~~~~~~~~~~~~~~~~~-~~------~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 336 (413)
T 3t18_A 265 AYGLRSGAAVGISSSKEIIEEFEASLA-HS------A-RCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRA 336 (413)
T ss_dssp CGGGCCEEEEEEESCHHHHHHHHHHHH-HH------H-HHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCcCcEEEEEecCCHHHHHHHHHHHH-Hh------h-hccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence 888 899998 8888776432100 00 0 00113467777777777765321 0113567788899999
Q ss_pred HHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHH
Q 043610 341 ELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA 420 (430)
Q Consensus 341 ~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~ 420 (430)
+++.+.|.+ .|+++.+ + .+...+.+.+. ...++.+.|.++||.+.+| .+++|||+...++++.++++.+
T Consensus 337 ~~l~~~l~~-~g~~~~~--~--~~~~~~~~~~~---~~~~~~~~l~~~gv~v~~g---~~~iRis~~~~~~~~~l~~l~~ 405 (413)
T 3t18_A 337 DVFVTAAKE-NKLTMIP--Y--FGGFFTFIPTD---KAFDIVKDLEKENIFTIPS---AKGIRVAICGVGEEKIPKLVQR 405 (413)
T ss_dssp HHHHHHHHH-TTCCCBC--C--CSSSCEEEECS---CHHHHHHHHHHTTEECEEC---SSEEEECTTTSCGGGHHHHHHH
T ss_pred HHHHHHHHH-cCCCccC--C--CceEEEEeCCC---CHHHHHHHHHhCCEEEecC---CCceEEEEeeCCHHHHHHHHHH
Confidence 999999987 5877653 1 12222333332 1337888899999999887 3579999986555555666666
Q ss_pred HHHHHH
Q 043610 421 FMKDFQ 426 (430)
Q Consensus 421 ~L~~~~ 426 (430)
+|+++.
T Consensus 406 ~l~~~~ 411 (413)
T 3t18_A 406 LAFYTN 411 (413)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 666553
No 152
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.87 E-value=5.1e-20 Score=185.10 Aligned_cols=275 Identities=14% Similarity=0.041 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCC
Q 043610 115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKA 191 (430)
Q Consensus 115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~ 191 (430)
...+++++.+++++|.+ +++++ +|+++++..++.+++++||+|++..+.+.+.. |...++..| +++.++..
T Consensus 62 ~~~~~l~~~ia~~~g~~---~~i~~-~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-- 135 (404)
T 1e5e_A 62 PTVSNLEGKIAFLEKTE---ACVAT-SSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-- 135 (404)
T ss_dssp HHHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT--
T ss_pred hHHHHHHHHHHHHhCCC---cEEEe-CChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC--
Confidence 44568899999999985 45665 56789999999999999999998877665532 211455667 66655541
Q ss_pred CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cC-CCcEEEEeccCcCCCC--ccccccccEEEeCC
Q 043610 192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KN-STGILVADMSSNFCSK--PVDVTRFGVIYAGA 263 (430)
Q Consensus 192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~-~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~ 263 (430)
|+++++ +++++++|++++++|+||.+.| +|.++ ++ +|+++++|++|+.+.. ++++ ..|+++.|+
T Consensus 136 -------d~~~l~~~i~~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~~~-~~di~~~S~ 207 (404)
T 1e5e_A 136 -------IPGEVKKHMKPNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPVDF-GVDVVVHSA 207 (404)
T ss_dssp -------STTHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGGGG-TCSEEEEET
T ss_pred -------CHHHHHHhcCCCCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCCcccc-CCEEEEEcC
Confidence 556776 7889999999999999999999 78886 68 9999999999997763 4432 347999999
Q ss_pred Ccccc-CCc--cEEEEEcHHHHh-ccCCCCCccccccchhhcCCC-CCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 043610 264 QKNVG-PSG--VTIVIVRKDLLG-NAQDKTPLMLDYKIHDENNSL-YNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRK 338 (430)
Q Consensus 264 ~K~~g-p~G--~g~l~v~~~~~~-~~~~~~p~~~~~~~~~~~~~~-~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~ 338 (430)
+|++| |.+ .|+++++++.++ .+.+... .+ .++.+...++++..+++. ++...++..+
T Consensus 208 sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~------------~~~g~~~~~~~~~~~~~~l~~------~~~~~~~~~~ 269 (404)
T 1e5e_A 208 TKYINGHTDVVAGLICGKADLLQQIRMVGIK------------DITGSVISPHDAWLITRGLST------LNIRMKAESE 269 (404)
T ss_dssp TTTTTCSSCCCCEEEEECHHHHHHHHHTCCC------------CCCCCCCCHHHHHHHHHHHTT------HHHHHHHHHH
T ss_pred ccccCCCCCCeEEEEEECHHHHHHHHHHHHH------------hCCCCCCCHHHHHHHHHhHhH------HHHHHHHHHH
Confidence 99997 544 499999998877 5433111 11 134566666666666642 3445555566
Q ss_pred HHHHHHHHHHccCCce--ecCCCCC-----------CCccceEEEEcCCCchhHHHHHHHHHcCCeecC---CC------
Q 043610 339 KAELLYNVIDGSNGFY--KCPVEKS-----------VRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK---GH------ 396 (430)
Q Consensus 339 l~~~l~~~l~~~~G~~--~~~~~~~-----------~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~---g~------ 396 (430)
..+.+.+.+++...+. ..+.-+. ....+.+.|.+++ ...+..+.|.+.||.... |.
T Consensus 270 ~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~l~~~~i~~~~~s~G~~~sl~~ 347 (404)
T 1e5e_A 270 NAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS--GFEGAKKLLDNLKLITLAVSLGGCESLIQ 347 (404)
T ss_dssp HHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT--HHHHHHHHHHTCSSSEESSCCCSSSCEEE
T ss_pred HHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC--CHHHHHHHHHhCCCceeccCCCCcceeee
Confidence 6667777776532221 1110000 0113567788764 222455566777875321 21
Q ss_pred -------------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610 397 -------------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 397 -------------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~~ 427 (430)
...+.+|||++. ||++++++.|+++++
T Consensus 348 ~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~----e~~~~li~~l~~al~ 393 (404)
T 1e5e_A 348 HPASMTHAVVPKEEREAAGITDGMIRLSVGI----EDADELIADFKQGLD 393 (404)
T ss_dssp CGGGTTTTTSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHHH
T ss_pred cccccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHH
Confidence 013679999996 667777766666543
No 153
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.87 E-value=6.7e-22 Score=197.22 Aligned_cols=319 Identities=13% Similarity=0.032 Sum_probs=205.7
Q ss_pred CCceeecCCC-------CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh-CC--CCCcEEEE
Q 043610 69 DRVFNFAAGP-------ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL-NI--PQEYSVLF 138 (430)
Q Consensus 69 ~~~~l~~~gp-------~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~-g~--~~~~~vv~ 138 (430)
+..++|+.|- .++++.|++++.+.+.+.. ...+.+. .-..++|+.+++++ +. +++ +|++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~--~g~~~lr~~la~~~~~~~~~~~-~v~~ 94 (394)
T 2ay1_A 26 QGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETET--------TKTYAGL--SGEPEFQKAMGELILGDGLKSE-TTAT 94 (394)
T ss_dssp TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCC--------CCCCCCS--SCCHHHHHHHHHHHHGGGCCGG-GEEE
T ss_pred ccccccccceeeCCCCCccCcHHHHHHHHHhcCCcc--------cCCCCCC--CCcHHHHHHHHHHHhCCCCCcc-cEEE
Confidence 3456666653 3567899999988765311 1111110 11236677777776 54 444 6776
Q ss_pred -EeCcHHHHHHHHHhhcC--CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC---Cc
Q 043610 139 -LQGGATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP---DA 209 (430)
Q Consensus 139 -~~~gaT~a~~~~~~sl~--~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~---~~ 209 (430)
.++|+++|++.++..+. .+||+|++..+++.+.. ..++..| +++.++...+ .+..+|+++++ +++ ++
T Consensus 95 ~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~l~~~~~~~ 170 (394)
T 2ay1_A 95 LATVGGTGALRQALELARMANPDLRVFVSDPTWPNHV--SIMNFMGLPVQTYRYFDA--ETRGVDFEGMKADLAAAKKGD 170 (394)
T ss_dssp EEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHH--HHHHHHTCCEEEEECEET--TTTEECHHHHHHHHHTCCTTC
T ss_pred EecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHH--HHHHHcCCceEEEecccc--cCCccCHHHHHHHHHhCCCCC
Confidence 14789999999887763 48999998888777643 4456677 8887876321 12246788876 432 46
Q ss_pred cEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCC-------ccc-cccc--c-EEEeCCCccccCCc-
Q 043610 210 KYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSK-------PVD-VTRF--G-VIYAGAQKNVGPSG- 271 (430)
Q Consensus 210 ~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~-------~id-l~~~--d-~~~~s~~K~~gp~G- 271 (430)
+++++++++|+||.+++ + |.++ +++|+++++|++|+.... ++. +... + +++.|++|++|++|
T Consensus 171 ~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 250 (394)
T 2ay1_A 171 MVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRE 250 (394)
T ss_dssp EEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGG
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCC
Confidence 77888999999999998 3 4444 578999999999885432 222 3222 2 67889999999889
Q ss_pred -cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH--H--hcCHHHHHHHHHHHHHHH
Q 043610 272 -VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL--E--LGGLNEVEKMNRKKAELL 343 (430)
Q Consensus 272 -~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~--~--~~g~~~v~~~~~~l~~~l 343 (430)
+|++++ ++++++.+.. .+ ... .....+++|...++++..+|+... + ..+++.+.++++++++++
T Consensus 251 riG~~~~~~~~~~~~~~l~~----~~--~~~--~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l 322 (394)
T 2ay1_A 251 RTGCLLALCADAATRELAQG----AM--AFL--NRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQL 322 (394)
T ss_dssp CEEEEEEECSSHHHHHHHHH----HH--HHH--HHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEeCCHHHHHHHHH----HH--HHH--HhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 599998 6765443210 00 000 001223456677777777776430 0 125788899999999999
Q ss_pred HHHHHccC---CceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHH
Q 043610 344 YNVIDGSN---GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA 420 (430)
Q Consensus 344 ~~~l~~~~---G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~ 420 (430)
.+.|++.. ++++.. + .....+.+.++ ...+...|.++||.+.+| +|||++ +++++|++++++
T Consensus 323 ~~~L~~~~~~~~~~~~~--~--~~g~~~~~~~~----~~~~~~~l~~~gi~v~~~------~Ris~~-~~~~~~i~~~~~ 387 (394)
T 2ay1_A 323 AGELRDLSGSDRFGFVA--E--HRGMFSRLGAT----PEQVKRIKEEFGIYMVGD------SRINIA-GLNDNTIPILAR 387 (394)
T ss_dssp HHHHHHHHTSSTTTHHH--H--CCSSEEECCCC----HHHHHHHHHHHCEECCTT------CEEEGG-GCCTTTHHHHHH
T ss_pred HHHHHhcCCCCCeeEEc--C--CceEEEeeCCC----HHHHHHHHHhCCEEecCC------CeEEee-cCCHhhHHHHHH
Confidence 99998632 244432 1 11222222222 224666677889998753 799988 578999999999
Q ss_pred HHHHH
Q 043610 421 FMKDF 425 (430)
Q Consensus 421 ~L~~~ 425 (430)
+|+++
T Consensus 388 ~l~~~ 392 (394)
T 2ay1_A 388 AIIEV 392 (394)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 99875
No 154
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.87 E-value=6.1e-21 Score=191.30 Aligned_cols=278 Identities=13% Similarity=0.001 Sum_probs=188.0
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHH-H-HHHHHhC-CceEEecCCC
Q 043610 115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKA-F-KEAQKFC-NPQVIWSGKA 191 (430)
Q Consensus 115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~-~-~~a~~~g-~~~~v~~~~~ 191 (430)
...+++++.+++++|.+ +.+++ +||++|++.++.+++++||+|++....|.+... . ..++..| ++..++.
T Consensus 65 ~~~~~l~~~la~~~g~~---~~i~~-~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--- 137 (398)
T 1gc0_A 65 PTLNLLEARMASLEGGE---AGLAL-ASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM--- 137 (398)
T ss_dssp HHHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT---
T ss_pred hHHHHHHHHHHHHhCCC---cEEEE-CCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC---
Confidence 45678999999999986 34555 467899999999988999999988777665421 1 1124456 5544432
Q ss_pred CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCc
Q 043610 192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQK 265 (430)
Q Consensus 192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K 265 (430)
.|+++++ +++++++|++++++|+||.+.| +|.++ +++|+++++|++|+.+.....+. ..|+++.|+||
T Consensus 138 ------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK 211 (398)
T 1gc0_A 138 ------ADLQALEAAMTPATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATK 211 (398)
T ss_dssp ------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTT
T ss_pred ------CCHHHHHHhcCCCCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCCchhhCceEEEECCcc
Confidence 3567776 7889999999999999999999 78886 78999999999998776433332 24799999999
Q ss_pred ccc-CCc--cEEEEEcHHHHh-ccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610 266 NVG-PSG--VTIVIVRKDLLG-NAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE 341 (430)
Q Consensus 266 ~~g-p~G--~g~l~v~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~ 341 (430)
++| |.+ .|+++++++.++ .+.+. .. ....++.+....+++..+++. ++...++..+.+.
T Consensus 212 ~~~~~~~~~~G~l~~~~~~~~~~~~~~----~~-------~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~ 274 (398)
T 1gc0_A 212 YLSGHGDITAGIVVGSQALVDRIRLQG----LK-------DMTGAVLSPHDAALLMRGIKT------LNLRMDRHCANAQ 274 (398)
T ss_dssp TTTCSSSCCCEEEEECHHHHHHHHHTH----HH-------HHTCCCCCHHHHHHHHHHHTT------HHHHHHHHHHHHH
T ss_pred ccCCCCCCeEEEEEEChHHHHHHHHHH----hh-------ccCCCCCCHHHHHHHHhccch------HHHHHHHHHHHHH
Confidence 997 554 599999988765 33210 00 001246677666666666653 3445556666666
Q ss_pred HHHHHHHccCCce--------------ecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecC---CC--------
Q 043610 342 LLYNVIDGSNGFY--------------KCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK---GH-------- 396 (430)
Q Consensus 342 ~l~~~l~~~~G~~--------------~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~---g~-------- 396 (430)
.+.+.|.+..++. +.. ........+++|.+++ ...+..+.|.+.|+.... |.
T Consensus 275 ~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~~--~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~ 351 (398)
T 1gc0_A 275 VLAEFLARQPQVELIHYPGLASFPQYTLAR-QQMSQPGGMIAFELKG--GIGAGRRFMNALQLFSRAVSLGDAESLAQHP 351 (398)
T ss_dssp HHHHHHHTCTTEEEEEEC-----------------CCTTEEEEEETT--HHHHHHHHHHHCSSSEECSCCSCSSCEEECG
T ss_pred HHHHHHhcCCCeeEEECCCCCCCcCHHHHH-hhCCCCceEEEEEECC--CHHHHHHHHHhCCCceeccCCCCcceeeecc
Confidence 7777776532222 111 0001234578888864 222455566777766432 20
Q ss_pred -----C------------CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610 397 -----R------------SVGGMRASIYNAMPLAGVEKLVAFMKDF 425 (430)
Q Consensus 397 -----~------------~~g~iRis~~~~~t~edv~~ll~~L~~~ 425 (430)
. ..+.||||++..+++++|+.+.++|+++
T Consensus 352 ~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 352 ASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp GGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 0 1368999999999999999999999875
No 155
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.87 E-value=2.3e-21 Score=195.55 Aligned_cols=319 Identities=13% Similarity=0.042 Sum_probs=202.8
Q ss_pred CCceeecCC-------CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC------CCCc-
Q 043610 69 DRVFNFAAG-------PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI------PQEY- 134 (430)
Q Consensus 69 ~~~~l~~~g-------p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~------~~~~- 134 (430)
+++++|+.| ++++++.|++++.+.+.+....+.. .. .. ..++|+.++++++. +++.
T Consensus 49 ~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~---~~---~g----~~~lr~~ia~~l~~~~~~~~~~~~~ 118 (420)
T 4f4e_A 49 PTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYL---PI---DG----IAAYDASVQKLLLGDDSPLIAAGRV 118 (420)
T ss_dssp SSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCC---CT---TC----CHHHHHHHHHHHHCTTCHHHHTTCE
T ss_pred CCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCC---CC---CC----cHHHHHHHHHHhcCCCccccccCce
Confidence 456777776 3456689999999887641111111 11 11 12455566665533 2221
Q ss_pred EEEEEeCcHHHHHHHH--HhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC---
Q 043610 135 SVLFLQGGATTQFAAV--PLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN--- 206 (430)
Q Consensus 135 ~vv~~~~gaT~a~~~~--~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~--- 206 (430)
+|++ ++|++++++.+ +.+++++||+|++..+++.++ ...++..| +++.++..++ .+..+|+++++ ++
T Consensus 119 ~i~~-t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~--~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~ 193 (420)
T 4f4e_A 119 VTAQ-ALGGTGALKIGADFLRTLNPKAKVAISDPSWENH--RALFDMAGFEVVAYPYYDA--KTNGVNFDGMLAALNGYE 193 (420)
T ss_dssp EEEE-EEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHH--HHHHHHTTCCEEEEECEET--TTTEECHHHHHHHHTTCC
T ss_pred EEEE-CCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhH--HHHHHHcCCeEEEeeeecc--ccCccCHHHHHHHHHhCC
Confidence 5666 47899999998 456678999999988877664 34566678 8888887321 12347888876 54
Q ss_pred CCccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCCc-----ccc------ccccEEEeCCCccccC
Q 043610 207 PDAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSKP-----VDV------TRFGVIYAGAQKNVGP 269 (430)
Q Consensus 207 ~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~~-----idl------~~~d~~~~s~~K~~gp 269 (430)
++++++++++++||||.+++ + |.++ +++|+++++|++++..... ..+ .+..+++.|++|.+|+
T Consensus 194 ~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 273 (420)
T 4f4e_A 194 PGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSL 273 (420)
T ss_dssp TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTC
T ss_pred CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcC
Confidence 78899999999999999998 3 4444 5889999999997643321 111 1123788999999998
Q ss_pred Cc--cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH--H--hcCHHHHHHHHHHHH
Q 043610 270 SG--VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL--E--LGGLNEVEKMNRKKA 340 (430)
Q Consensus 270 ~G--~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~--~--~~g~~~v~~~~~~l~ 340 (430)
+| +|++++ +++.++.+.. .+.... .....+++...+.++..+++... + +..++.+++++++++
T Consensus 274 ~G~RiG~~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 345 (420)
T 4f4e_A 274 YGERVGALSIITDSKDEAARVLS------QLKRVI--RTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMR 345 (420)
T ss_dssp GGGCEEEEEEECSSHHHHHHHHH------HHHHHH--HTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcEEEEEEcCCHHHHHHHHH------HHHHHH--hcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 89 888864 3555443110 000000 01223455666666666554310 0 124678899999999
Q ss_pred HHHHHHHHcc---CCceecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHH
Q 043610 341 ELLYNVIDGS---NGFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVE 416 (430)
Q Consensus 341 ~~l~~~l~~~---~G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~ 416 (430)
+++++.|++. .|+.+.. + .. +.+.+ +. .+. .+.+.|.++||.+.++ .|||+.. .++++|+
T Consensus 346 ~~l~~~L~~~~~~~~~~~~~--~--~~-g~~~~-~~---~~~~~~~~~l~~~gI~v~~~------~Ris~~~-~~~~~i~ 409 (420)
T 4f4e_A 346 NGLVERLKAAGIERDFSFIN--A--QR-GMFSY-SG---LTSAQVDRLREEFGIYAVST------GRICVAA-LNTRNLD 409 (420)
T ss_dssp HHHHHHHHHTTCSSCCTHHH--H--SC-SSEEE-CC---CCHHHHHHHHHHHCEECCTT------SEEEGGG-CCTTTHH
T ss_pred HHHHHHHHhcCCCCCceeEC--C--Cc-cEEEE-eC---CCHHHHHHHHHhCCEEecCC------CeEEEec-CCHHHHH
Confidence 9999999974 2554432 1 12 22322 11 223 4556677889998764 3999874 3566799
Q ss_pred HHHHHHHHHH
Q 043610 417 KLVAFMKDFQ 426 (430)
Q Consensus 417 ~ll~~L~~~~ 426 (430)
+++++|++++
T Consensus 410 ~~~~~l~~~l 419 (420)
T 4f4e_A 410 VVANAIAAVL 419 (420)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999876
No 156
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.87 E-value=3.1e-21 Score=193.12 Aligned_cols=279 Identities=11% Similarity=0.062 Sum_probs=191.0
Q ss_pred HHHHHHHHHHhCC-----CCCcEEEEEeCcHHHHHHHHHhhcCCCCC----cEEEEeCChhHHHHHHHHHHhC-CceEEe
Q 043610 118 EKAESDLRALLNI-----PQEYSVLFLQGGATTQFAAVPLNLCTPND----PVDYIVTGSWGDKAFKEAQKFC-NPQVIW 187 (430)
Q Consensus 118 ~~~r~~la~l~g~-----~~~~~vv~~~~gaT~a~~~~~~sl~~~gd----~vl~~~~g~~~~~~~~~a~~~g-~~~~v~ 187 (430)
.++|+.++++++. .++.+|+++ +|+++++..++..++++|| +|++..+.+.++ ...++..| +++.++
T Consensus 71 ~~lr~aia~~~~~~g~~~~~~~~i~~t-~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~--~~~~~~~g~~~~~~~ 147 (391)
T 3bwn_A 71 PELEDAIKDLHGVVGNAATEDRYIVVG-TGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTY--VEETTYVRSGMYKWE 147 (391)
T ss_dssp HHHHHHHHHHHHHHCSBCCSSSEEEEE-EHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHH--HHHHHTTCBTTEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEe-CChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhH--HHHHHHcCCeEEEec
Confidence 3566677776662 232277775 7899999999999988999 888777766654 34556678 777666
Q ss_pred cCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCCCCccc-cCCCcEEEEeccCcCCCC-cccc-ccccEEEeCCC
Q 043610 188 SGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSA-KNSTGILVADMSSNFCSK-PVDV-TRFGVIYAGAQ 264 (430)
Q Consensus 188 ~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~pei~~~-~~~g~~lvvD~a~s~G~~-~idl-~~~d~~~~s~~ 264 (430)
.+. +.++ .+++++|++++++||||.++++|.+. +.+++++++|+++..+.. ++.. .+.++++.|++
T Consensus 148 ~d~----------~~l~-~~~~k~v~l~~p~NPtG~~~~~l~~~~~~~~~~ii~De~y~~~~~~~l~~~~~~~i~~~S~S 216 (391)
T 3bwn_A 148 GDA----------WGFD-KKGPYIELVTSPNNPDGTIRETVVNRPDDDEAKVIHDFAYYWPHYTPITRRQDHDIMLFTFS 216 (391)
T ss_dssp EES----------TTCC-CCSCEEEEEESSCTTTCCCCCCCC-----CCCEEEEECTTCSTTTSCCCCCBCCSEEEEEHH
T ss_pred CCH----------HHcC-CCCCEEEEECCCCCCCchhHHHHHHHhhcCCCEEEEeCCCCCCCCCccccCCCCeEEEEech
Confidence 531 1222 36789999999999999999976552 233499999999886432 2322 12258999999
Q ss_pred ccccCCc--cEEEEE-cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHH--------hcCHHHHH
Q 043610 265 KNVGPSG--VTIVIV-RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLE--------LGGLNEVE 333 (430)
Q Consensus 265 K~~gp~G--~g~l~v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~--------~~g~~~v~ 333 (430)
|.+|++| +|++++ ++++++.+.... . ....+++.+.+.++..+|+...+ ...++.++
T Consensus 217 K~~g~~GlRiG~~~~~~~~l~~~l~~~~----~--------~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 284 (391)
T 3bwn_A 217 KITGHAGSRIGWALVKDKEVAKKMVEYI----I--------VNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGR 284 (391)
T ss_dssp HHHSCGGGCEEEEEECCHHHHHHHHHHH----H--------HHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHH
T ss_pred hhcCCCccceEEEEecCHHHHHHHHHHh----c--------ccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHH
Confidence 9999999 599998 788876543200 0 01135677888888888875321 23578899
Q ss_pred HHHHHHHHHHHHHHHccCCceecCCCCCC---------CccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCC---CCe
Q 043610 334 KMNRKKAELLYNVIDGSNGFYKCPVEKSV---------RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRS---VGG 401 (430)
Q Consensus 334 ~~~~~l~~~l~~~l~~~~G~~~~~~~~~~---------rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~---~g~ 401 (430)
++++++++++.+.|++..|+++....... .....+.+.+++. ..+.+.|.++||.+.+|... .++
T Consensus 285 ~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~---~~~~~~l~~~gV~v~pg~~fg~~~~~ 361 (391)
T 3bwn_A 285 EMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEE---TDLVSELRRHKVMSRAGERCGSDKKH 361 (391)
T ss_dssp HHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESSS---CCHHHHHHHTTEECEEGGGGTCCTTE
T ss_pred HHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCcH---HHHHHHHHHCCEEEccCCCCCCCCCE
Confidence 99999999999999974466654211110 1112345666531 24666778899998876422 468
Q ss_pred eEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610 402 MRASIYNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 402 iRis~~~~~t~edv~~ll~~L~~~~~ 427 (430)
+|||++. ++++++++++.|+++++
T Consensus 362 iRis~~~--~~e~i~~~~~~L~~~~~ 385 (391)
T 3bwn_A 362 VRVSMLS--REDVFNVFLERLANMKL 385 (391)
T ss_dssp EEEESCS--CHHHHHHHHHHHHSCC-
T ss_pred EEEEecC--CHHHHHHHHHHHHHHHH
Confidence 9999984 89999999999998754
No 157
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.87 E-value=2.9e-20 Score=188.58 Aligned_cols=317 Identities=15% Similarity=0.091 Sum_probs=199.5
Q ss_pred CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-----
Q 043610 80 NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL----- 154 (430)
Q Consensus 80 ~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl----- 154 (430)
.+++.+++++.+.+.+.+ ...+ ...+++++.+++++|.+ +++++ +|||++++.++.++
T Consensus 40 ~~~~~~~~a~~~~~~~~~---------~~~~----~~~~~l~~~la~~~g~~---~~i~~-~sGt~a~~~al~~l~~~~~ 102 (437)
T 3bb8_A 40 VIGTKELQLMVEASLDGW---------LTTG----RFNDAFEKKLGEYLGVP---YVLTT-TSGSSANLLALTALTSPKL 102 (437)
T ss_dssp CCCHHHHHHHHHHHHHCC---------CBSC----HHHHHHHHHHHHHHTCS---EEEEE-SCHHHHHHHHHHHTTCGGG
T ss_pred CCCHHHHHHHHHHHHcCC---------cCCC----hHHHHHHHHHHHHHCCC---cEEEe-CCHHHHHHHHHHHhhhccc
Confidence 467889999988875310 1112 24678999999999986 46665 67889999999887
Q ss_pred ----CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC-
Q 043610 155 ----CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK- 226 (430)
Q Consensus 155 ----~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p- 226 (430)
+++||+|++....+.+.. ..++..| +++.++..++ +..+|+++++ +++++++|+++| .+|...|
T Consensus 103 ~~~~~~~gd~Vi~~~~~~~~~~--~~~~~~g~~~~~v~~~~~---~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~ 174 (437)
T 3bb8_A 103 GVRALKPGDEVITVAAGFPTTV--NPTIQNGLIPVFVDVDIP---TYNVNASLIEAAVSDKTKAIMIAH---TLGNLFDL 174 (437)
T ss_dssp GGGSCCTTCEEEECSSSCHHHH--HHHHHTTCEEEECCEETT---TTEECGGGHHHHCCTTEEEEEEEC---GGGCCCCH
T ss_pred ccccCCCcCEEEECCCCcHHHH--HHHHHcCCEEEEEeccCc---cCCcCHHHHHHhcCCCCeEEEEeC---CCCChhcH
Confidence 788999998777766543 3345567 7766665321 2246888887 788999999986 4677777
Q ss_pred -CCccc-cCCCcEEEEeccCcCCCCcccccc----ccEEEeCCCcccc-CCc-cEEEEEcHHHHhc-cCCCCCcccc---
Q 043610 227 -EYPSA-KNSTGILVADMSSNFCSKPVDVTR----FGVIYAGAQKNVG-PSG-VTIVIVRKDLLGN-AQDKTPLMLD--- 294 (430)
Q Consensus 227 -ei~~~-~~~g~~lvvD~a~s~G~~~idl~~----~d~~~~s~~K~~g-p~G-~g~l~v~~~~~~~-~~~~~p~~~~--- 294 (430)
+|.++ +++|+++++|++|++|..+ +... .|+++.|++|..+ +.| .|+++.+++.+.. +....++..+
T Consensus 175 ~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~~~~~d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (437)
T 3bb8_A 175 AEVRRVADKYNLWLIEDCCDALGSTY-DGKMAGTFGDIGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYC 253 (437)
T ss_dssp HHHHHHHHHHTCEEEEECTTCTTCEE-TTEETTSSSSEEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC--
T ss_pred HHHHHHHHHcCCEEEEECccccCceE-CCeecccccCEEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCccccc
Confidence 78876 6889999999999988765 4432 2676676544443 223 4788877554432 1100000000
Q ss_pred -----------c----cchh----h------cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610 295 -----------Y----KIHD----E------NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG 349 (430)
Q Consensus 295 -----------~----~~~~----~------~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~ 349 (430)
+ .... + .+...++.+.....++ .+|+. +++..++.++++++++++|.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l-~~l~~------~~~~~~~~~~~~~~l~~~L~~ 326 (437)
T 3bb8_A 254 APGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGL-AQLER------IEEFVEKRKANFKYLKDALQS 326 (437)
T ss_dssp --------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHH-HHHHH------HHHHHHHHHHHHHHHHHHGGG
T ss_pred ccccccccccccccccccccccccccccccccCcccCCCHHHHHHHH-HHHHH------HHHHHHHHHHHHHHHHHHhhc
Confidence 0 0000 0 0001112333333322 22332 245556668889999999987
Q ss_pred cCCceecCCCCCCC--ccceEEEEcCCC-chhH-HHHHHHHHcCCeecCCCC------C--------------------C
Q 043610 350 SNGFYKCPVEKSVR--SFMNVPFTLEKS-DLEA-EFVKEAAKEKMVQLKGHR------S--------------------V 399 (430)
Q Consensus 350 ~~G~~~~~~~~~~r--s~~iv~f~~~~~-~~~~-~~~~~L~~~Gi~~~~g~~------~--------------------~ 399 (430)
..|+.+++..+..+ +..++.+.++.. +.+. ++.+.|.++||.+..++. . .
T Consensus 327 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 406 (437)
T 3bb8_A 327 CADFIELPEATENSDPSWFGFPITLKEDSGVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMN 406 (437)
T ss_dssp GTTTEECCCCCTTEECCCSSEEEEECGGGSSCHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHH
T ss_pred cCCccccCCCCCCCceeeEEEEEEECCcCcCcHHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhc
Confidence 55766654222122 222344433311 1233 799999999998654321 0 1
Q ss_pred CeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 400 GGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 400 g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
+.||++++.++|++||++++++|+++++.+
T Consensus 407 ~~lrl~~~~~~t~~di~~i~~~l~~~~~~~ 436 (437)
T 3bb8_A 407 QTFWIGIYPGLTHDHLDYVVSKFEEFFGLN 436 (437)
T ss_dssp HEEEECCSTTCCHHHHHHHHHHHHHHTTTT
T ss_pred CEEEecCCCCCCHHHHHHHHHHHHHHHccc
Confidence 149999999999999999999999987654
No 158
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.87 E-value=1.1e-20 Score=195.08 Aligned_cols=317 Identities=15% Similarity=0.106 Sum_probs=204.8
Q ss_pred CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC-C--CCCcEEEEEeCcHHHHHHHHHhhcCCC
Q 043610 81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN-I--PQEYSVLFLQGGATTQFAAVPLNLCTP 157 (430)
Q Consensus 81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g-~--~~~~~vv~~~~gaT~a~~~~~~sl~~~ 157 (430)
.|..+++++.+.+.+..+.+...|.... ...++.+.+.+.+++..| . +++ +|+++ +|+++++..++..++.+
T Consensus 102 ~P~~~~~~~~~~l~~~~~~~~~~Y~~~~---G~~~lr~~ia~~~~~~~gG~~~~~~-~i~~t-~G~~~ai~~~~~~l~~~ 176 (498)
T 3ihj_A 102 FPEDAKKRARRILQACGGNSLGSYSASQ---GVNCIREDVAAYITRRDGGVPADPD-NIYLT-TGASDGISTILKILVSG 176 (498)
T ss_dssp SCHHHHHHHHHHHHHC----------CC---SCHHHHHHHHHHHHHHTTTCCCCGG-GEEEE-SSHHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCCC---CHHHHHHHHHHHHHHhcCCCCCCcc-cEEEc-CCHHHHHHHHHHHHcCC
Confidence 5777888877777653321111221211 222334455556666654 4 344 67765 78999999999999888
Q ss_pred CC----cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-----CccEEEEeecCCCccccC
Q 043610 158 ND----PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-----DAKYLHICANETIHGVEF 225 (430)
Q Consensus 158 gd----~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-----~~~lv~i~~~~t~tG~~~ 225 (430)
|| +|++..+.+.++ ...++..| +++.++..++.+| .+|+++|+ +++ ++++|++++++||||.++
T Consensus 177 gd~~~d~Vlv~~p~y~~~--~~~~~~~g~~~v~~~~~~~~~~--~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~ 252 (498)
T 3ihj_A 177 GGKSRTGVMIPIPQYPLY--SAVISELDAIQVNYYLDEENCW--ALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQ 252 (498)
T ss_dssp CGGGSEEEEEEESCCTHH--HHHHHHTTCEEEEEECBGGGTT--BCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCC
T ss_pred CCCCCCEEEEeCCCchhH--HHHHHHcCCEEEEeeccccccC--CCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcC
Confidence 75 888877776654 33455667 7777777643334 37888887 444 589999999999999999
Q ss_pred C--C---Cccc-cCCCcEEEEeccCcCCCC-----cccccc------------cc-EEEeCCCccc-cCCc--cEEEEE-
Q 043610 226 K--E---YPSA-KNSTGILVADMSSNFCSK-----PVDVTR------------FG-VIYAGAQKNV-GPSG--VTIVIV- 277 (430)
Q Consensus 226 p--e---i~~~-~~~g~~lvvD~a~s~G~~-----~idl~~------------~d-~~~~s~~K~~-gp~G--~g~l~v- 277 (430)
+ + |.++ +++|+++++|+++..... ...+.. .. +++.|++|.+ |++| +|++++
T Consensus 253 s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~ 332 (498)
T 3ihj_A 253 SRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVI 332 (498)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEE
T ss_pred CHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEe
Confidence 9 3 5554 589999999999875322 222222 11 5678999999 7778 788874
Q ss_pred --cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHH-----------HHHHhcCHHHHHHHHHHHHHHHH
Q 043610 278 --RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFE-----------YLLELGGLNEVEKMNRKKAELLY 344 (430)
Q Consensus 278 --~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~-----------~l~~~~g~~~v~~~~~~l~~~l~ 344 (430)
++++++.+... .. ...+++..++.++..+++ ++. ..+.+.+++++++++++
T Consensus 333 ~~~~~l~~~l~~~----------~~---~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~---~~~~~~~~l~~~~~~l~ 396 (498)
T 3ihj_A 333 NLHPEIKGQLVKL----------LS---VRLCPPVSGQAAMDIVVNPPVAGEESFEQFSR---EKESVLGNLAKKAKLTE 396 (498)
T ss_dssp SCCHHHHHHHHHH----------HH---HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHH---HHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHH----------Hh---ccCCCCHHHHHHHHHHhcCCccCcccHHHHHH---HHHHHHHHHHHHHHHHH
Confidence 77777654210 00 123567778877777663 222 24678889999999999
Q ss_pred HHHHccCCceecCCCCCCCccceEEEEcCCC----------chhH-HH-H-HHHHHcCCeecCCCCC-----CCeeEEee
Q 043610 345 NVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS----------DLEA-EF-V-KEAAKEKMVQLKGHRS-----VGGMRASI 406 (430)
Q Consensus 345 ~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~----------~~~~-~~-~-~~L~~~Gi~~~~g~~~-----~g~iRis~ 406 (430)
+.|.+..|+.+.+ + .+...+.+.+... +.+. ++ + +.|.++||.+.+|... .+++|+++
T Consensus 397 ~~L~~~~g~~~~~--p--~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~ 472 (498)
T 3ihj_A 397 DLFNQVPGIHCNP--L--QGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTI 472 (498)
T ss_dssp HHHHTSTTEECCC--C--CBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEEC
T ss_pred HHHhcCCCcEecC--C--CeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEe
Confidence 9999755887653 1 2223222233210 1122 32 4 4567789998775421 23799999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHh
Q 043610 407 YNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 407 ~~~~t~edv~~ll~~L~~~~~~ 428 (430)
. .++++++++++.|++++++
T Consensus 473 ~--~~~e~l~~~i~~L~~~~~~ 492 (498)
T 3ihj_A 473 L--PPVEKLKTVLQKVKDFHIN 492 (498)
T ss_dssp C--SCHHHHHHHHHHHHHHHHH
T ss_pred C--CCHHHHHHHHHHHHHHHHH
Confidence 5 6899999999999888764
No 159
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.87 E-value=1.9e-21 Score=194.89 Aligned_cols=277 Identities=14% Similarity=0.054 Sum_probs=182.9
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-HH-HHHHHhC-CceEEecCCCC
Q 043610 116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-AF-KEAQKFC-NPQVIWSGKAE 192 (430)
Q Consensus 116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~~-~~a~~~g-~~~~v~~~~~~ 192 (430)
.++++|+.+++++|.+ ++++++ |||+|++.++. ++++||+|++....+.+.. ++ ..++..| +++.++..
T Consensus 56 ~~~~lr~~la~~~g~~---~~i~~~-sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~--- 127 (393)
T 1n8p_A 56 NRENLERAVAALENAQ---YGLAFS-SGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDL--- 127 (393)
T ss_dssp HHHHHHHHHHHHTTCS---EEEEES-CHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSH---
T ss_pred hHHHHHHHHHHHhCCC---cEEEEC-ChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCC---
Confidence 4678999999999986 345554 56999999999 8899999998776554331 22 1234557 77666541
Q ss_pred cCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCC----CcEEEEeccCcCCCCcccccc--ccEEEe
Q 043610 193 KYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNS----TGILVADMSSNFCSKPVDVTR--FGVIYA 261 (430)
Q Consensus 193 ~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~----g~~lvvD~a~s~G~~~idl~~--~d~~~~ 261 (430)
| ++++ +++++++|++++++|++|.++| +|.++ +++ |+++++|++|+.+... ++.+ .|+++.
T Consensus 128 ------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~~~~~~~di~~~ 199 (393)
T 1n8p_A 128 ------L-NDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPLNFGADIVVH 199 (393)
T ss_dssp ------H-HHHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGGGGTCSEEEE
T ss_pred ------h-HHHHHhcccCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-CHHHcCCeEEEE
Confidence 5 6666 6789999999999999999999 78886 677 9999999999877542 3333 479999
Q ss_pred CCCccccCCc--c-EEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 043610 262 GAQKNVGPSG--V-TIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNR 337 (430)
Q Consensus 262 s~~K~~gp~G--~-g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~ 337 (430)
|+||++|++| + |+++++ +++++.+.. +. ...+ ++.+....+++..+++. +....++..
T Consensus 200 S~sK~~g~~G~rigG~~~~~~~~~~~~l~~-------~~--~~~g---~~~~~~~~~~~~~~l~~------~~~~~~~~~ 261 (393)
T 1n8p_A 200 SATKYINGHSDVVLGVLATNNKPLYERLQF-------LQ--NAIG---AIPSPFDAWLTHRGLKT------LHLRVRQAA 261 (393)
T ss_dssp ETTTTTTCSSCCCCEEEEESCHHHHHHHHH-------HH--HHHC---CCCCHHHHHHHHHHHTT------HHHHHHHHH
T ss_pred ECcccccCCCCceeEEEEeCCHHHHHHHHH-------HH--HhcC---CCCCHHHHHHHHhccch------HHHHHHHHH
Confidence 9999999888 7 999885 677665421 00 0011 23444444444444442 344555566
Q ss_pred HHHHHHHHHHHccCC-cee--cC-CC-CCC--------C--c-cceEEEEcCCCchhH-HHHHHHHHcCCeecCC-----
Q 043610 338 KKAELLYNVIDGSNG-FYK--CP-VE-KSV--------R--S-FMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKG----- 395 (430)
Q Consensus 338 ~l~~~l~~~l~~~~G-~~~--~~-~~-~~~--------r--s-~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g----- 395 (430)
+.+..+.+.|.+... +.- .+ .. .+. + . +.+++|.+++...+. .++..|...++.+..|
T Consensus 262 ~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~~~~~~s~G~~~s~ 341 (393)
T 1n8p_A 262 LSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGGIESL 341 (393)
T ss_dssp HHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCCSSCE
T ss_pred HHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCcceECCCCCCCcce
Confidence 667777778876332 321 11 10 010 1 2 467889997521122 4555554333222111
Q ss_pred --------C------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610 396 --------H------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 396 --------~------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~ 426 (430)
+ ...+.||+|++.++++++|+.+.++|+++.
T Consensus 342 ~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~~ 392 (393)
T 1n8p_A 342 LEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQAT 392 (393)
T ss_dssp EECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHHH
T ss_pred eeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHhh
Confidence 1 013579999999999999999999998764
No 160
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.87 E-value=1.7e-20 Score=186.99 Aligned_cols=278 Identities=13% Similarity=0.051 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-HHH-HHHHHhC-CceEEecCCCC
Q 043610 116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-KAF-KEAQKFC-NPQVIWSGKAE 192 (430)
Q Consensus 116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~~~-~~a~~~g-~~~~v~~~~~~ 192 (430)
..+++++.+++++|.+ + . ++++ +|+++++.++..++++||+|++....+.+. ... ..++..| ++..++.
T Consensus 53 ~~~~l~~~la~~~~~~-~-~-i~~~-sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---- 124 (386)
T 1cs1_A 53 TRDVVQRALAELEGGA-G-A-VLTN-TGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ---- 124 (386)
T ss_dssp HHHHHHHHHHHHHTCS-E-E-EEES-SHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECT----
T ss_pred cHHHHHHHHHHHhCCC-c-E-EEeC-CHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCC----
Confidence 3568889999999987 2 4 4454 569999999999889999999877666552 222 2234556 5554442
Q ss_pred cCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCcc
Q 043610 193 KYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQKN 266 (430)
Q Consensus 193 ~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K~ 266 (430)
.|+++++ +++++++|++++++|+||.+.| +|.++ +++|+++++|++|+.+.....++ ..|+++.|+||+
T Consensus 125 -----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~ 199 (386)
T 1cs1_A 125 -----GDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKY 199 (386)
T ss_dssp -----TCHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTT
T ss_pred -----CCHHHHHHhhccCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCceEEEEcCccc
Confidence 2567776 6788999999999999999999 78886 68999999999999887643332 237999999999
Q ss_pred cc-CCcc--EEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610 267 VG-PSGV--TIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL 342 (430)
Q Consensus 267 ~g-p~G~--g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~ 342 (430)
+| |.|. |++++++ ++++.+.+ .... ..++.+....+++..+++. ++...++..+.++.
T Consensus 200 ~~~~~~~~~G~~~~~~~~l~~~l~~---~~~~---------~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~ 261 (386)
T 1cs1_A 200 LNGHSDVVAGVVIAKDPDVVTELAW---WANN---------IGVTGGAFDSYLLLRGLRT------LVPRMELAQRNAQA 261 (386)
T ss_dssp TTCSSCCCCEEEEESSHHHHHHHHH---HHHH---------HTCBCCHHHHHHHHHHHTT------HHHHHHHHHHHHHH
T ss_pred ccCCCCceeEEEEeCcHHHHHHHHH---HHHh---------cCCCCCHHHHHHHHhcccH------HHHHHHHHHHHHHH
Confidence 96 6553 9999986 67665422 0000 1134566655555555543 34455666667777
Q ss_pred HHHHHHccCCceec--CC-CC----------CCCccceEEEEcCCCchhHHHHHHHHHcCCeecC---C-----------
Q 043610 343 LYNVIDGSNGFYKC--PV-EK----------SVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK---G----------- 395 (430)
Q Consensus 343 l~~~l~~~~G~~~~--~~-~~----------~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~---g----------- 395 (430)
+.+.|.+..++... +. .. ......++.|.+++ . ..++.+.|.++||.+.. |
T Consensus 262 l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~ 339 (386)
T 1cs1_A 262 IVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG-D-EQTLRRFLGGLSLFTLAESLGGVESLISHAAT 339 (386)
T ss_dssp HHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-C-HHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGG
T ss_pred HHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC-C-HHHHHHHHHhCCcceEcccCCCcceeeecccc
Confidence 77777763333211 10 00 01123567788874 2 33677788888998752 3
Q ss_pred -C-------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610 396 -H-------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 396 -~-------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~ 426 (430)
. ...+.+|||++..+++++++++.++|+++.
T Consensus 340 ~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~~ 384 (386)
T 1cs1_A 340 MTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAAN 384 (386)
T ss_dssp TTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHT
T ss_pred cccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHhh
Confidence 0 113689999999999999999999998864
No 161
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.86 E-value=4.5e-21 Score=191.76 Aligned_cols=313 Identities=13% Similarity=0.037 Sum_probs=191.2
Q ss_pred ecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC------CCcEEEEE-eCcHHHH
Q 043610 74 FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP------QEYSVLFL-QGGATTQ 146 (430)
Q Consensus 74 ~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~------~~~~vv~~-~~gaT~a 146 (430)
+..++.++.+.+.+++.+.+.+....++. .. . . ..++|+.++++++.. ++ +|+++ ++|++++
T Consensus 40 d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~---~~-~--g----~~~lr~~ia~~~~~~~~~~~~~~-~i~~v~t~G~~~a 108 (401)
T 7aat_A 40 DDNGKPYVLNCVRKAEAMIAAKKMDKEYL---PI-A--G----LADFTRASAELALGENSEAFKSG-RYVTVQGISGTGS 108 (401)
T ss_dssp CTTSCCCCCHHHHHHHHHHHHTTCCCCCC---CT-T--C----CHHHHHHHHHHHHCTTCHHHHTT-CEEEEEEEHHHHH
T ss_pred CCCCCEechHHHHHHHHHhcccccccCCC---CC-C--C----CHHHHHHHHHHhcCCCccccccC-ceEEEecCcchHH
Confidence 33445566678898888765421111111 10 1 1 235566666666532 44 67652 5789999
Q ss_pred HHHHHhhc---CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccc----cc-cCCCccEEEEeec
Q 043610 147 FAAVPLNL---CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDA----LE-QNPDAKYLHICAN 217 (430)
Q Consensus 147 ~~~~~~sl---~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~----l~-i~~~~~lv~i~~~ 217 (430)
++.++..+ ++|||+|++..+.+.++. ..++..| +++.++...+..+ .+|+++ ++ +.+++++|+++++
T Consensus 109 l~~~~~~l~~~~~~gd~Vlv~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~--~~d~~~l~~~l~~~~~~~~~v~i~~p 184 (401)
T 7aat_A 109 LRVGANFLQRFFKFSRDVYLPKPSWGNHT--PIFRDAGLQLQAYRYYDPKTC--SLDFTGAMEDISKIPEKSIILLHACA 184 (401)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESCCTTHH--HHHHHTTCEEEEEECEETTTT--EECHHHHHHHHTTSCTTCEEEEESSS
T ss_pred HHHHHHHHHHhccCCCEEEEcCCCchhHH--HHHHHcCCeeEeeeeeccccC--ccCHHHHHHHHHhCCCCcEEEEeCCC
Confidence 99877654 489999999888776653 3456677 7777776432112 467774 33 4578999999999
Q ss_pred CCCccccCC--C---Cccc-cCCCcEEEEeccCc-CCCCcc--c---cc------cccEEEeCCCccccCCc--cEEEEE
Q 043610 218 ETIHGVEFK--E---YPSA-KNSTGILVADMSSN-FCSKPV--D---VT------RFGVIYAGAQKNVGPSG--VTIVIV 277 (430)
Q Consensus 218 ~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s-~G~~~i--d---l~------~~d~~~~s~~K~~gp~G--~g~l~v 277 (430)
+||||.+++ + |.++ +++|+++++|+++. ++..+. + +. ...+++.|++|.+|++| +|++++
T Consensus 185 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~ 264 (401)
T 7aat_A 185 HNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTV 264 (401)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEE
Confidence 999999998 3 4444 58999999999865 333221 1 11 11378899999999889 899887
Q ss_pred ---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHH--HHH--hcCHHHHHHHHHHHHHHHHHHHHcc
Q 043610 278 ---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY--LLE--LGGLNEVEKMNRKKAELLYNVIDGS 350 (430)
Q Consensus 278 ---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~--l~~--~~g~~~v~~~~~~l~~~l~~~l~~~ 350 (430)
+++..+.+.... ... .. .....++...+.++..+++. +.. ...++..++++++++++++++|.+
T Consensus 265 ~~~~~~~~~~~~~~~---~~~---~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~- 335 (401)
T 7aat_A 265 ICRDAEEAKRVESQL---KIL---IR--PMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKK- 335 (401)
T ss_dssp ECSSHHHHHHHHHHH---HHH---HH--HHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred EeCCHHHHHHHHHHH---HHH---HH--hccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 444322210000 000 00 01123344455555444421 100 113677888999999999999987
Q ss_pred CC----ceecCCCCCCCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610 351 NG----FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF 425 (430)
Q Consensus 351 ~G----~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~ 425 (430)
.| +...+ + .. +.+.+ .+ .+.+++.+| .++||.+.+ ++|||++..++++ |++++++|+++
T Consensus 336 ~~~~~~~~~~~--~--~~-~~~~~--~~--~~~~~~~~ll~~~gi~v~~------~~Ris~~~~~~~~-i~~~~~~l~~~ 399 (401)
T 7aat_A 336 EGSSHNWQHIT--D--QI-GMFCF--TG--LKPEQVERLTKEFSIYMTK------DGRISVAGVASSN-VGYLAHAIHQV 399 (401)
T ss_dssp TTCCSCCHHHH--H--CC-SSEEE--CC--CCHHHHHHHHHHHCEECCT------TCEEEGGGCCTTT-HHHHHHHHHHH
T ss_pred cCCCCCCceec--C--Cc-ceEEe--cC--CCHHHHHHHHHhCCEeccC------CCeEEeccCChhh-HHHHHHHHHHH
Confidence 44 33321 1 11 12222 22 234444554 678998864 3899998665555 99999999987
Q ss_pred H
Q 043610 426 Q 426 (430)
Q Consensus 426 ~ 426 (430)
+
T Consensus 400 ~ 400 (401)
T 7aat_A 400 T 400 (401)
T ss_dssp H
T ss_pred h
Confidence 5
No 162
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.86 E-value=3.5e-21 Score=197.00 Aligned_cols=278 Identities=12% Similarity=0.055 Sum_probs=178.7
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHH--HHHHHHhC-CceEEecCCCC
Q 043610 116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKA--FKEAQKFC-NPQVIWSGKAE 192 (430)
Q Consensus 116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~--~~~a~~~g-~~~~v~~~~~~ 192 (430)
..+++++.+++++|.+ +++++ +||++|+..++. ++++||+|++..+.|.+... ...++..| +++.++.
T Consensus 134 ~~~~l~~~la~~~g~~---~~i~~-~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~---- 204 (464)
T 1ibj_A 134 TRDALESLLAKLDKAD---RAFCF-TSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT---- 204 (464)
T ss_dssp HHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECT----
T ss_pred HHHHHHHHHHHHhCCC---eEEEE-CCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCC----
Confidence 4678999999999975 56665 677899988775 77999999987776655421 11234456 6555543
Q ss_pred cCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--ccccccccEEEeCCCc
Q 043610 193 KYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--PVDVTRFGVIYAGAQK 265 (430)
Q Consensus 193 ~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~~K 265 (430)
.|+++++ +++++++|++++++|+||.+.| +|.++ +++|+++++|++|+.|.. ++++ ..|+++.|+||
T Consensus 205 -----~d~~~l~~~i~~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~~-~~div~~S~sK 278 (464)
T 1ibj_A 205 -----TKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLEL-GADIVMHSATK 278 (464)
T ss_dssp -----TSHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGGT-TCSEEEEETTT
T ss_pred -----CCHHHHHHHhccCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccCChhhc-CCEEEEECCcc
Confidence 2567776 7889999999999999999999 78886 689999999999988765 4543 34899999999
Q ss_pred ccc-CCcc--EEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610 266 NVG-PSGV--TIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE 341 (430)
Q Consensus 266 ~~g-p~G~--g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~ 341 (430)
+++ |.|+ |++++++ ++++.+.. +. . ...++.+....+++..+|+.+.. .++...+....+.+
T Consensus 279 ~~~g~~Gl~~G~l~~~~~~l~~~l~~----~~------~--~~g~~~~~~~~~a~~~al~~~~~--r~~~~~~~~~~l~~ 344 (464)
T 1ibj_A 279 FIAGHSDVMAGVLAVKGEKLAKEVYF----LQ------N--SEGSGLAPFDCWLCLRGIKTMAL--RIEKQQENARKIAM 344 (464)
T ss_dssp TTTCSSCCCCEEEEECSHHHHHHHHH----HH------H--HTTCBCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHH
T ss_pred cccCCCCCcEEEEEEChHHHHHHHHH----HH------H--hcCCCCCHHHHHHHHhchhhHHH--HHHHHHHHHHHHHH
Confidence 995 8886 9999985 66655321 00 0 01134455566665556542211 01222222222233
Q ss_pred HHH----------HHHHccCCceecCCCCCCCccceEEEEcCCCchh-H-HHHHHHHHcCCeecCCC-------------
Q 043610 342 LLY----------NVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLE-A-EFVKEAAKEKMVQLKGH------------- 396 (430)
Q Consensus 342 ~l~----------~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~-~-~~~~~L~~~Gi~~~~g~------------- 396 (430)
++. ++|.+..|+++..... .....++.|.+++ .+ . +|++.|...||.+..|.
T Consensus 345 ~l~~~~~v~~~~~~~L~~~p~~~~~~~~~-~g~g~~~~~~l~~--~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~ 421 (464)
T 1ibj_A 345 YLSSHPRVKKVYYAGLPDHPGHHLHFSQA-KGAGSVFSFITGS--VALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSH 421 (464)
T ss_dssp HHHTCTTCCEEECTTSTTSTTHHHHTTTC-SCCCSEEEEECSC--HHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTT
T ss_pred HHHhCCCceEEECCCCCCCcchHHHhccC-CCCceEEEEEECC--HHHHHHHHHhcCcceEeecCCCCceeeeccccccc
Confidence 332 2222222343332111 1123467888853 22 2 47777766666654442
Q ss_pred ------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610 397 ------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 (430)
Q Consensus 397 ------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~ 429 (430)
...+.+|+|++. ||++++++.|++++++.
T Consensus 422 ~~~~~~~~~~~g~~~~~iRlsvg~----edi~~li~~L~~al~~~ 462 (464)
T 1ibj_A 422 ASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFKTF 462 (464)
T ss_dssp CSCCSSSSSSSSCCTTCEEEECCS----SCHHHHHHHHHHHHHSC
T ss_pred ccCCHHHHHhcCCCcCeEEEEeCC----CCHHHHHHHHHHHHhhc
Confidence 013579999985 89999999999988754
No 163
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.86 E-value=7.3e-21 Score=193.41 Aligned_cols=279 Identities=12% Similarity=0.023 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-HHHH-HHHHhC-CceEEecCCC
Q 043610 115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-KAFK-EAQKFC-NPQVIWSGKA 191 (430)
Q Consensus 115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~~~~-~a~~~g-~~~~v~~~~~ 191 (430)
..++++++.+++++|.+ +.+++ ++|+++++.++.+++++||+|++....|.+. .++. .+++.| +++.++.
T Consensus 114 ~~~~~l~~~lA~l~g~~---~~v~~-~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~--- 186 (445)
T 1qgn_A 114 PTTVVLEEKISALEGAE---STLLM-ASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDP--- 186 (445)
T ss_dssp HHHHHHHHHHHHHHTCS---EEEEE-SCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECS---
T ss_pred hHHHHHHHHHHHHhCCC---cEEEe-CCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCC---
Confidence 45678999999999986 34555 4567999999999999999999877665543 2222 244567 6655543
Q ss_pred CcCCCCCCccccc--cCCCc-cEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCC
Q 043610 192 EKYTKIPNFDALE--QNPDA-KYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQ 264 (430)
Q Consensus 192 ~~~g~~~d~~~l~--i~~~~-~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~ 264 (430)
.|+++++ +++++ ++|++++++|++|.+.| +|.++ +++|+++++|++|+.+.....++ ..|+++.|+|
T Consensus 187 ------~d~~~l~~ai~~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~~~~g~Div~~S~s 260 (445)
T 1qgn_A 187 ------ADVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSAT 260 (445)
T ss_dssp ------SCHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTT
T ss_pred ------CCHHHHHHHhccCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCCEEEEECCc
Confidence 2567776 67888 99999999999999999 78886 68999999999998765422221 2479999999
Q ss_pred ccccCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610 265 KNVGPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE 341 (430)
Q Consensus 265 K~~gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~ 341 (430)
|++|+.| +|+++.++++++.+.. +. . ...++++....+.+..+++. +....+++.+.+.
T Consensus 261 K~~gg~gd~~~G~l~~~~~l~~~l~~-------~~---~--~~g~~~~~~~a~~~~~~l~~------l~~r~~~~~~~a~ 322 (445)
T 1qgn_A 261 KFLGGHNDVLAGCISGPLKLVSEIRN-------LH---H--ILGGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 322 (445)
T ss_dssp TTTTCSSSCCCEEEEECHHHHHHHHH-------HH---H--HHCCCCCHHHHHHHHHHGGG------HHHHHHHHHHHHH
T ss_pred ccccccccceEEEEEECHHHHHHHHH-------HH---H--HhCCCCCHHHHHHHHHhHHH------HHHHHHHHHHHHH
Confidence 9998777 8999999988775421 00 0 01123555444444444443 3344555666678
Q ss_pred HHHHHHHccCCc-eecCC-CCC-----------CCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCC-----------
Q 043610 342 LLYNVIDGSNGF-YKCPV-EKS-----------VRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGH----------- 396 (430)
Q Consensus 342 ~l~~~l~~~~G~-~~~~~-~~~-----------~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~----------- 396 (430)
++.+.|.+.+++ .+... .+. .....+++|.+++...+. +++..|+..++.+..|.
T Consensus 323 ~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~ 402 (445)
T 1qgn_A 323 RMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIM 402 (445)
T ss_dssp HHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHH
T ss_pred HHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCceEeccCCCCceeeeccccc
Confidence 888999875555 33211 111 013457889997521112 45555543233322221
Q ss_pred --------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 397 --------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 397 --------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
...+.||+|++ .||++.+++.|++.+++
T Consensus 403 ~h~~~~~~~~~~~g~~~~~iRlSvG----~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 403 SYWDLSQSDRAKYGIMDNLVRFSFG----VEDFDDLKADILQALDS 444 (445)
T ss_dssp HSTTSCHHHHHTTTCCSSEEEEECC----SSCHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHhh
Confidence 11357999998 47899999999998764
No 164
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.86 E-value=3.6e-21 Score=193.32 Aligned_cols=308 Identities=11% Similarity=-0.000 Sum_probs=199.7
Q ss_pred CCCcHHHHHHHHH-HhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC------CCCcEEEE--EeCcHHHHHHH
Q 043610 79 ANLPEKVLLKAQS-ELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI------PQEYSVLF--LQGGATTQFAA 149 (430)
Q Consensus 79 ~~~~~~V~~a~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~------~~~~~vv~--~~~gaT~a~~~ 149 (430)
.++++.|++++.+ .+.. +. .+++++. .-..++|+.++++++. +++ +|++ + +|++++++.
T Consensus 46 ~~~~~~v~~a~~~~~~~~----~~----~~~y~~~--~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~t-~g~~~a~~~ 113 (412)
T 1yaa_A 46 PWVLPSVKAAEKLIHNDS----SY----NHEYLGI--TGLPSLTSNAAKIIFGTQSDALQED-RVISVQS-LSGTGALHI 113 (412)
T ss_dssp BCCCHHHHHHHHHHHTCT----TC----CCCCCCT--TCCHHHHHHHHHHHHCTTCHHHHTT-CEEEEEE-EHHHHHHHH
T ss_pred CCCcHHHHHHHHhhhcCc----cc----ccCCCCC--CCcHHHHHHHHHHHhcCCCCCCCcc-eEEEEec-cchHhHHHH
Confidence 4678999999988 7641 10 1111111 1133666777777632 344 6776 5 689999998
Q ss_pred H--HhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC---CccEEEEeecCCCc
Q 043610 150 V--PLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP---DAKYLHICANETIH 221 (430)
Q Consensus 150 ~--~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~---~~~lv~i~~~~t~t 221 (430)
+ +..++.+||+|++..+++.+.. ..++..| +++.++..++ .+..+|+++++ +++ .+.++++++++|||
T Consensus 114 ~~~~~~~~~~gd~Vl~~~p~~~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPt 189 (412)
T 1yaa_A 114 SAKFFSKFFPDKLVYLSKPTWANHM--AIFENQGLKTATYPYWAN--ETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPT 189 (412)
T ss_dssp HHHHHHHHCTTCCEEEEESCCTTHH--HHHHTTTCCEEEEECEET--TTTEECHHHHHHHHHHSCTTCEEEEECSSCTTT
T ss_pred HHHHHHHhCCCCEEEEeCCCCccHH--HHHHHcCceEEEEeeecC--CCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence 7 3444579999999888877643 4566678 8877776211 12247888876 432 24555669999999
Q ss_pred cccCC--C---Cccc-cCCCcEEEEeccCc-C--CC---C--cc-ccc---c---ccEEEeCCCccccCCc--cEEEE--
Q 043610 222 GVEFK--E---YPSA-KNSTGILVADMSSN-F--CS---K--PV-DVT---R---FGVIYAGAQKNVGPSG--VTIVI-- 276 (430)
Q Consensus 222 G~~~p--e---i~~~-~~~g~~lvvD~a~s-~--G~---~--~i-dl~---~---~d~~~~s~~K~~gp~G--~g~l~-- 276 (430)
|.+++ + |.++ +++|+++++|++|+ + +. . ++ ++. . .++++.|++|.+||+| +|+++
T Consensus 190 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~ 269 (412)
T 1yaa_A 190 GLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLA 269 (412)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEE
Confidence 99998 3 4444 58999999999974 3 21 1 22 322 1 2377899999999989 69988
Q ss_pred E-----cHH----HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHH
Q 043610 277 V-----RKD----LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL----ELGGLNEVEKMNRKKAELL 343 (430)
Q Consensus 277 v-----~~~----~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~----~~~g~~~v~~~~~~l~~~l 343 (430)
. +++ +++.+.. . .. ...+++|...+.++..+|+... -..+++.++++++++++++
T Consensus 270 ~~~~~~~~~~~~~l~~~l~~-------~---~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 337 (412)
T 1yaa_A 270 LTKQAQNKTIKPAVTSQLAK-------I---IR--SEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHAL 337 (412)
T ss_dssp CCSCTTHHHHHHHHHHHHHH-------H---HH--TTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCHHHHHHHHHHHHH-------H---Hh--hccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 555 4443211 0 00 1224667788888888886431 0125788999999999999
Q ss_pred HHHHHccC---CceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHH
Q 043610 344 YNVIDGSN---GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA 420 (430)
Q Consensus 344 ~~~l~~~~---G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~ 420 (430)
++.|++.. ++++.+ + ... .+.+ +. .. ...+...|.++||.+.+ ++|||++. .+++|++++++
T Consensus 338 ~~~L~~~~~~~~~~~~~--~--~~~-~~~~-~~-~~-~~~~~~~l~~~gi~v~~------~~Ris~~~-~~~~~i~~~~~ 402 (412)
T 1yaa_A 338 RDHLVKLGTPGNWDHIV--N--QCG-MFSF-TG-LT-PQMVKRLEETHAVYLVA------SGRASIAG-LNQGNVEYVAK 402 (412)
T ss_dssp HHHHHHHTCSSCCTHHH--H--CCS-SEEE-CC-CC-HHHHHHHHHHHCEECCT------TSEEEGGG-CCTTTHHHHHH
T ss_pred HHHHHhhCCCCCeeeec--c--Cce-EEEe-eC-CC-HHHHHHHHHhCCEEecc------CcEEEEcc-CCHhHHHHHHH
Confidence 99998732 255432 1 122 2222 21 11 22454455678998865 48999984 58999999999
Q ss_pred HHHHHHHhh
Q 043610 421 FMKDFQAKH 429 (430)
Q Consensus 421 ~L~~~~~~~ 429 (430)
+|+++++..
T Consensus 403 ~l~~~~~~~ 411 (412)
T 1yaa_A 403 AIDEVVRFY 411 (412)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhh
Confidence 999988753
No 165
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.77 E-value=1.6e-23 Score=209.24 Aligned_cols=324 Identities=10% Similarity=0.023 Sum_probs=212.2
Q ss_pred CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCcHHH
Q 043610 70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGGATT 145 (430)
Q Consensus 70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~gaT~ 145 (430)
.++.|+.|- .+.++.+++++.+.+.+ + ..++.....+..+++.+.+++.+| .+++ +|++ ++|+++
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~----~-----~~~y~~~~~~l~~~la~~l~~~~g~~~~~~-~v~~-~~g~~~ 100 (392)
T 3b1d_A 32 QLLPAWIADMDFEVMPEVKQAIHDYAEQ----L-----VYGYTYASDELLQAVLDWEKSEHQYSFDKE-DIVF-VEGVVP 100 (392)
Confidence 556665554 35678899998887642 1 112222233333444444444556 4444 6666 478999
Q ss_pred HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCC-CCCCccccc--cC-CCccEEEEeecCCC
Q 043610 146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYT-KIPNFDALE--QN-PDAKYLHICANETI 220 (430)
Q Consensus 146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g-~~~d~~~l~--i~-~~~~lv~i~~~~t~ 220 (430)
++.+++..+.++||+|++..+.+.+.. ..++..| +++.++.... .+ ..+|+++++ +. +++++|++++++|+
T Consensus 101 a~~~~~~~~~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~--~g~~~~d~~~l~~~l~~~~~~~v~~~~~~np 176 (392)
T 3b1d_A 101 AISIAIQAFTKEGEAVLINSPVYPPFA--RSVRLNNRKLVSNSLKEE--NGLFQIDFEQLENDIVENDVKLYLLCNPHNP 176 (392)
Confidence 999999998889999998777666542 3445566 7766665321 11 236778887 55 68899999999999
Q ss_pred ccccCC--C---Cccc-cCCCcEEEEeccCcCCCC----cccc---cc--c--cEEEeCCCccccCCc--cEEEEEcHH-
Q 043610 221 HGVEFK--E---YPSA-KNSTGILVADMSSNFCSK----PVDV---TR--F--GVIYAGAQKNVGPSG--VTIVIVRKD- 280 (430)
Q Consensus 221 tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~----~idl---~~--~--d~~~~s~~K~~gp~G--~g~l~v~~~- 280 (430)
||.+++ + |.++ +++|+++++|++++.... ...+ .. . .+++.|++|++|.+| +|+++++++
T Consensus 177 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 256 (392)
T 3b1d_A 177 GGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPT 256 (392)
Confidence 999988 3 4444 589999999999875321 1122 11 2 378899999998767 788888654
Q ss_pred HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-cCCceecCCC
Q 043610 281 LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-SNGFYKCPVE 359 (430)
Q Consensus 281 ~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~~~~~ 359 (430)
+++.+..... ....++++...++++..+|+.. ...++.++++++++++++.+.|++ ..|+.+..
T Consensus 257 ~~~~~~~~~~-----------~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-- 321 (392)
T 3b1d_A 257 LCAQFKHQQL-----------VNNHHEVSSLGYIATETAYRYG--KPWLVALKAVLEENIQFAVEYFAQEAPRLKVMK-- 321 (392)
Confidence 6665432110 0112356677777777777642 235788889999999999999986 34665542
Q ss_pred CCCCccceEEEEcCCCchhH-HHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610 360 KSVRSFMNVPFTLEKSDLEA-EFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 360 ~~~rs~~iv~f~~~~~~~~~-~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~ 427 (430)
+ .+...+.+.++..+.+. ++.+.|. ++||.+.+|.. ..+++||++.. ++++++++++.|+++++
T Consensus 322 ~--~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~--~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 322 P--QGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA--PKSLVEEICKRIVCCLP 391 (392)
Confidence 1 22233334555311233 6888885 78999877642 13479999875 68999999999998765
No 166
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.86 E-value=2.9e-20 Score=187.36 Aligned_cols=323 Identities=13% Similarity=0.090 Sum_probs=207.4
Q ss_pred CceeecCCCCC-----CcHHHHHHHH--HHhhhccCCCCcccccCCC-cHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610 70 RVFNFAAGPAN-----LPEKVLLKAQ--SELYNWRGSGMSVMEMSHR-GKEFKSIIEKAESDLRALLNIPQEYSVLFLQG 141 (430)
Q Consensus 70 ~~~l~~~gp~~-----~~~~V~~a~~--~~~~~~~~~g~s~~~~~~~-~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ 141 (430)
..++|+.|-.. .|+.+++++. +.+. .+.. ..++ ++. .-..++|+.++++++++++ +|++ ++
T Consensus 26 ~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~----~~~~---~~~Yp~~~--~g~~~lr~~ia~~~~~~~~-~i~~-t~ 94 (423)
T 3ez1_A 26 LNLNMQRGQPADADFDLSNGLLTVLGAEDVRM----DGLD---LRNYPGGV--AGLPSARALFAGYLDVKAE-NVLV-WN 94 (423)
T ss_dssp CCEESCCCCCCHHHHHTTGGGGGSCCGGGCEE----TTEE---TTSSCSCT--TCCHHHHHHHHHHTTSCGG-GEEE-CS
T ss_pred ceEecCCCCCChHhCCCcHHHHHHHhhhHHhh----cchh---hhCCCCCC--CChHHHHHHHHHHhCCChh-hEEE-eC
Confidence 46777776533 5556777775 3222 1110 1122 111 1134788999999999876 7776 57
Q ss_pred cHHHHHH--HHHhhcCC--C---------CCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c
Q 043610 142 GATTQFA--AVPLNLCT--P---------NDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q 205 (430)
Q Consensus 142 gaT~a~~--~~~~sl~~--~---------gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i 205 (430)
|++++++ .++..++. + ||+|++..+++.+.. ..++..| +++.++... .+ +|+++++ +
T Consensus 95 G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~---~g--~d~~~l~~~l 167 (423)
T 3ez1_A 95 NSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHF--LLLQTLGFELLTVDMQS---DG--PDVDAVERLA 167 (423)
T ss_dssp SCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHH--HHHHHHTCEEEEEEEET---TE--ECHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHH--HHHHHcCCEEEeccCCC---CC--CCHHHHHHHH
Confidence 8999997 78888766 7 589998887776643 3456677 777777643 23 7888887 5
Q ss_pred --CCCccEEEE-eecCCCccccCC-----CCccc--cCCCcEEEEeccCcC---CC----Ccccc---------ccccEE
Q 043610 206 --NPDAKYLHI-CANETIHGVEFK-----EYPSA--KNSTGILVADMSSNF---CS----KPVDV---------TRFGVI 259 (430)
Q Consensus 206 --~~~~~lv~i-~~~~t~tG~~~p-----ei~~~--~~~g~~lvvD~a~s~---G~----~~idl---------~~~d~~ 259 (430)
++++++|++ ++++||||.+++ +|.++ +++|+++++|++|+. .. .+.++ .+.+++
T Consensus 168 ~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 247 (423)
T 3ez1_A 168 GTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFV 247 (423)
T ss_dssp HSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEE
T ss_pred hhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEE
Confidence 688999875 488999999999 35553 589999999999873 21 11121 123488
Q ss_pred EeCCCcccc-CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHH-HH-HhcCHHHHHHHH
Q 043610 260 YAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY-LL-ELGGLNEVEKMN 336 (430)
Q Consensus 260 ~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~-l~-~~~g~~~v~~~~ 336 (430)
+.|++|+++ ..++|+++.++++++.+.... . ....+++...+.++..+|+. .. -...++...+++
T Consensus 248 ~~S~sK~~~~G~r~G~~~~~~~~~~~~~~~~----------~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 315 (423)
T 3ez1_A 248 FASTSKITFAGAGLGFVASSEDNIRWLSKYL----------G--AQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAII 315 (423)
T ss_dssp EEESTTTSCSSSSCEEEEECHHHHHHHHHHH----------H--HSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHH
T ss_pred EeCchhhccCCcceEEEEeCHHHHHHHHHHH----------h--hhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 999999853 345899999998877642200 0 01134566667776666654 10 001234455555
Q ss_pred HHHHHHHHHHHHcc---CC--ceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecC-CCC-------CCCeeE
Q 043610 337 RKKAELLYNVIDGS---NG--FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK-GHR-------SVGGMR 403 (430)
Q Consensus 337 ~~l~~~l~~~l~~~---~G--~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~-g~~-------~~g~iR 403 (430)
+++++.+.+.|.+. .| +.+.. + .....+.+.+++. ...++.+.|.++||.+.+ |.. ..+++|
T Consensus 316 ~~~~~~l~~~l~~~l~~~~~~~~~~~--p--~~g~~~~~~~~~~-~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iR 390 (423)
T 3ez1_A 316 APKFRAVDEVLRAELGEGGEYATWTL--P--KGGYFISLDTAEP-VADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLR 390 (423)
T ss_dssp HHHHHHHHHHHHHHHTTTTSSEEECC--C--SBSSCEEEEESSS-CHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEE
T ss_pred HHHHHHHHHHHHHhcCcCCCceEEeC--C--CccEEEEEECCCC-cHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEE
Confidence 55555555555431 33 54432 2 1223456677652 233688888999999887 421 246899
Q ss_pred EeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 404 ASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 404 is~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
||+... ++++++++++.|++++++
T Consensus 391 is~~~~-~~~~i~~~~~~l~~~l~~ 414 (423)
T 3ez1_A 391 LAPTRP-PVEEVRTAMQVVAACIRL 414 (423)
T ss_dssp ECCSSS-CHHHHHHHHHHHHHHHHH
T ss_pred EEcCCC-CHHHHHHHHHHHHHHHHH
Confidence 999755 999999999999988764
No 167
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.86 E-value=1.2e-20 Score=189.44 Aligned_cols=320 Identities=11% Similarity=-0.002 Sum_probs=209.2
Q ss_pred CCceeecCCC-------CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh-CC-----CCCcE
Q 043610 69 DRVFNFAAGP-------ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL-NI-----PQEYS 135 (430)
Q Consensus 69 ~~~~l~~~gp-------~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~-g~-----~~~~~ 135 (430)
+.+++|+.|- .++++.|.+++.+.+.+. +. .+.+++. .-..++|+.+++++ +. +++ +
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~---~~----~~~y~~~--~g~~~lr~~la~~~~~~~~~~~~~~-~ 99 (412)
T 1ajs_A 30 PRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNS---SL----NHEYLPI--LGLAEFRTCASRLALGDDSPALQEK-R 99 (412)
T ss_dssp TTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCT---TC----CCCCCCT--TCCHHHHHHHHHHHHCTTCHHHHTT-C
T ss_pred CCceeeccceecCCCCCccccHHHHHHHHHhhhCh---hh----ccCCCCC--CCCHHHHHHHHHHHhcCCCCccCCC-c
Confidence 4456666654 356789999988776221 00 1111111 11346778888887 43 444 6
Q ss_pred EEE--EeCcHHHHHHHHH--hhcCCCC-----CcEEEEeCChhHHHHHHHHHHhC-C-ceEEecCCCCcCCCCCCccccc
Q 043610 136 VLF--LQGGATTQFAAVP--LNLCTPN-----DPVDYIVTGSWGDKAFKEAQKFC-N-PQVIWSGKAEKYTKIPNFDALE 204 (430)
Q Consensus 136 vv~--~~~gaT~a~~~~~--~sl~~~g-----d~vl~~~~g~~~~~~~~~a~~~g-~-~~~v~~~~~~~~g~~~d~~~l~ 204 (430)
|++ + +|+++|++.++ ..++.+| |+|++..+++.++. ..++..| + ++.++...+ .+..+|+++++
T Consensus 100 v~~~~t-~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~--~~~~~d~~~l~ 174 (412)
T 1ajs_A 100 VGGVQS-LGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHN--GVFTTAGFKDIRSYRYWDT--EKRGLDLQGFL 174 (412)
T ss_dssp EEEEEE-EHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHH--HHHHHTTCSCEEEEECEET--TTTEECHHHHH
T ss_pred EEEEEC-CCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHH--HHHHHcCCceeEEEeeecC--CCCccCHHHHH
Confidence 776 5 78999999885 3455789 99999888877643 4566677 7 877876321 12246788776
Q ss_pred --cC---CCccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCc-CCCC-------ccc-ccc-cc--EEEe
Q 043610 205 --QN---PDAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSN-FCSK-------PVD-VTR-FG--VIYA 261 (430)
Q Consensus 205 --i~---~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s-~G~~-------~id-l~~-~d--~~~~ 261 (430)
+. ++++++++++++|+||.+++ + |.++ +++|+++++|+++. ++.. ++. +.. .| +++.
T Consensus 175 ~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 254 (412)
T 1ajs_A 175 SDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQ 254 (412)
T ss_dssp HHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEE
T ss_pred HHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEE
Confidence 43 47888889999999999998 3 4554 58899999999954 4332 122 221 23 7899
Q ss_pred CCCccccCCc--cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH----HhcCHHHH
Q 043610 262 GAQKNVGPSG--VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL----ELGGLNEV 332 (430)
Q Consensus 262 s~~K~~gp~G--~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~----~~~g~~~v 332 (430)
|++|.+|++| +|++++ ++++++.+... ...+ .....+++|...++++..+|+... -...++.+
T Consensus 255 s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 326 (412)
T 1ajs_A 255 SFSKNFGLYNERVGNLTVVAKEPDSILRVLSQ---MQKI-----VRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTM 326 (412)
T ss_dssp ECTTTSCCGGGCEEEEEEECSSHHHHHHHHHH---HHHH-----HHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred ecccccCCCCcceEEEEEecCCHHHHHHHHHH---HHHH-----HhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 9999999999 799999 77754331100 0000 011224567778888888887431 01256889
Q ss_pred HHHHHHHHHHHHHHHHccCC----ceecCCCCCCCccceEEEEcCCCchhHH-HHHHHHHcCCeecCCCCCCCeeEEeec
Q 043610 333 EKMNRKKAELLYNVIDGSNG----FYKCPVEKSVRSFMNVPFTLEKSDLEAE-FVKEAAKEKMVQLKGHRSVGGMRASIY 407 (430)
Q Consensus 333 ~~~~~~l~~~l~~~l~~~~G----~~~~~~~~~~rs~~iv~f~~~~~~~~~~-~~~~L~~~Gi~~~~g~~~~g~iRis~~ 407 (430)
.++++++++++++.|.+ .| +.+.. + .. +.+.+ + + .+.+ +...|.++||.+.++ +|||++
T Consensus 327 ~~~~~~~~~~l~~~L~~-~~~~~~~~~~~--~--~~-~~~~~-~-~--~~~~~~~~~l~~~gv~v~~~------~Ris~~ 390 (412)
T 1ajs_A 327 ADRILSMRSELRARLEA-LKTPGTWNHIT--D--QI-GMFSF-T-G--LNPKQVEYLINQKHIYLLPS------GRINMC 390 (412)
T ss_dssp HHHHHHHHHHHHHHHHH-TTCSSCCHHHH--H--CC-SSEEE-C-C--CCHHHHHHHHHTTCEECCTT------SEEEGG
T ss_pred HHHHHHHHHHHHHHHHh-hCCCCCeeEEc--C--CC-ceEEE-e-C--CCHHHHHHHHHhCCEEecCC------cEEEee
Confidence 99999999999999987 44 55432 1 11 22332 1 1 1233 444567789998753 799998
Q ss_pred CCCCHHHHHHHHHHHHHHHHh
Q 043610 408 NAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 408 ~~~t~edv~~ll~~L~~~~~~ 428 (430)
. .+++|++++++.|++++++
T Consensus 391 ~-~~~~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 391 G-LTTKNLDYVATSIHEAVTK 410 (412)
T ss_dssp G-CCTTTHHHHHHHHHHHHHH
T ss_pred e-CCHHHHHHHHHHHHHHHHh
Confidence 4 5899999999999998865
No 168
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.86 E-value=7.4e-20 Score=184.87 Aligned_cols=315 Identities=7% Similarity=-0.050 Sum_probs=202.5
Q ss_pred CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC---C-
Q 043610 81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC---T- 156 (430)
Q Consensus 81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~---~- 156 (430)
.++.|++++.+.+.+...... +.+.. ....++++.++++++.+.+ +|+|+ +|++++++.++..+. +
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~~-----~~~~~---~~~~~l~~~la~~~~~~~~-~v~~~-~ggtea~~~ai~~~~~~~~~ 129 (429)
T 1s0a_A 60 NHPQLNAAMKSQIDAMSHVMF-----GGITH---APAIELCRKLVAMTPQPLE-CVFLA-DSGSVAVEVAMKMALQYWQA 129 (429)
T ss_dssp SCHHHHHHHHHHHHHCSCCCC-----SSEEC---HHHHHHHHHHHHHSCTTCC-EEEEE-SSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcccccc-----cccCC---HHHHHHHHHHHHhCCCCCC-EEEEe-CCHHHHHHHHHHHHHHHhcc
Confidence 589999999998865321111 01111 2245677789999987665 77775 789999999887542 2
Q ss_pred ---CCCcEEEEeCChhHHHHHHHHHH----------h---C-CceEEecCCC---CcCCCCCCccccc--cC---CCccE
Q 043610 157 ---PNDPVDYIVTGSWGDKAFKEAQK----------F---C-NPQVIWSGKA---EKYTKIPNFDALE--QN---PDAKY 211 (430)
Q Consensus 157 ---~gd~vl~~~~g~~~~~~~~~a~~----------~---g-~~~~v~~~~~---~~~g~~~d~~~l~--i~---~~~~l 211 (430)
|||+|++..+.+.+.... .... + . .+..++.... ..++ ..|+++++ ++ +++++
T Consensus 130 ~g~~~~~vi~~~~~yh~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~l~~~l~~~~~~~~~ 207 (429)
T 1s0a_A 130 KGEARQRFLTFRNGYHGDTFG-AMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWD-ERDMVGFARLMAAHRHEIAA 207 (429)
T ss_dssp HTCCCCEEEEETTCCCCSSHH-HHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCC-GGGGHHHHHHHHHHTTTEEE
T ss_pred cCCCCCeEEEECCCCCCCchh-hhhhcCCchhhcccccCCCCCceEeCCCcccccccch-HHHHHHHHHHHHhCCCCEEE
Confidence 689999877655442110 1100 0 1 2445554210 0122 35777776 44 56777
Q ss_pred EEEeec-CCCccccCC------CCccc-cCCCcEEEEeccCc-CCCCc----ccccc--ccEEEeCCCcccc-C-CccEE
Q 043610 212 LHICAN-ETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSKP----VDVTR--FGVIYAGAQKNVG-P-SGVTI 274 (430)
Q Consensus 212 v~i~~~-~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~~----idl~~--~d~~~~s~~K~~g-p-~G~g~ 274 (430)
|++..+ +|+||.+.+ +|.++ +++|+++++|++|+ +|... ++... .|++ +++|++| + .++|+
T Consensus 208 vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~l~~G~~~iG~ 285 (429)
T 1s0a_A 208 VIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDIL--CLGKALTGGTMTLSA 285 (429)
T ss_dssp EEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGTSSSCCEE
T ss_pred EEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEE--EecccccCCCccceE
Confidence 777776 799997665 24444 58999999999997 65321 22212 2555 4569996 4 67999
Q ss_pred EEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc---C
Q 043610 275 VIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS---N 351 (430)
Q Consensus 275 l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~---~ 351 (430)
+++++++++.+.+.....+ .. ....+.|..++.++.++++.+.+ +...++.+++++++++.|++. .
T Consensus 286 ~~~~~~~~~~l~~~~~~~~------~~-~~t~~~n~~~~~a~~aal~~~~~----~~~~~~~~~~~~~l~~~L~~l~~~~ 354 (429)
T 1s0a_A 286 TLTTREVAETISNGEAGCF------MH-GPTFMGNPLACAAANASLAILES----GDWQQQVADIEVQLREQLAPARDAE 354 (429)
T ss_dssp EEECHHHHHHHHTSTTSSC------SC-CCTTTTCHHHHHHHHHHHHHHHT----CHHHHHHHHHHHHHHHHHGGGGGCT
T ss_pred EEeCHHHHHHhhcCCCccc------cc-CCCCCCCHHHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999988776432100000 00 01135678888999999997753 256788888999999999863 1
Q ss_pred CceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 352 GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 352 G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
++.... + .+ ..+.+.+++.....++.+.|.++||.+.+. .+.+||+++..++++|+++++++|++++++
T Consensus 355 ~~~~~~--~--~g-~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~---~~~iRis~~~~~t~e~i~~~~~~l~~~~~~ 423 (429)
T 1s0a_A 355 MVADVR--V--LG-AIGVVETTHPVNMAALQKFFVEQGVWIRPF---GKLIYLMPPYIILPQQLQRLTAAVNRAVQD 423 (429)
T ss_dssp TEEEEE--E--ET-TEEEEEESSCBCHHHHHHHHHHTTEECCCB---TTEEEECCCTTCCHHHHHHHHHHHHHHTSS
T ss_pred CEEEEE--E--ee-EEEEEEECCcccHHHHHHHHHHCCCEEecc---CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 232111 1 12 345566664211236888898999998653 257999999899999999999999998653
No 169
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.86 E-value=1e-20 Score=189.12 Aligned_cols=302 Identities=10% Similarity=-0.011 Sum_probs=200.5
Q ss_pred CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC----
Q 043610 81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT---- 156 (430)
Q Consensus 81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~---- 156 (430)
.++.|++++.+.+.++.. +.. .+. ....+++++.+++++|. + +++++ +|+++|+..++..+..
T Consensus 57 ~~~~v~~a~~~~~~~~~~-~~~-----~~~---~~~~~~l~~~la~~~g~--~-~v~~~-~gg~~a~~~al~~~~~~~~~ 123 (397)
T 2ord_A 57 SHPRLVEAIKDQAEKLIH-CSN-----LFW---NRPQMELAELLSKNTFG--G-KVFFA-NTGTEANEAAIKIARKYGKK 123 (397)
T ss_dssp TCHHHHHHHHHHHHHCSC-CCT-----TSE---EHHHHHHHHHHHHTTTS--C-EEEEE-SSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccc-Ccc-----ccC---CHHHHHHHHHHHHhcCC--C-eEEEe-CCHHHHHHHHHHHHHHHhhc
Confidence 588999999998865321 111 011 23456888999999984 3 67775 7899999998887642
Q ss_pred --C-CCcEEEEeCChhHHHHHHHHHHhC-C------------ceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecC
Q 043610 157 --P-NDPVDYIVTGSWGDKAFKEAQKFC-N------------PQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANE 218 (430)
Q Consensus 157 --~-gd~vl~~~~g~~~~~~~~~a~~~g-~------------~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~ 218 (430)
+ +++|++.+..+.+... ..++..| + +..++ ..|+++++ +++++++|++++++
T Consensus 124 ~~~~~~~vi~~~~~yh~~~~-~~~~~~g~~~~~~~~~p~~~~~~~~~---------~~d~~~l~~~l~~~~~~v~~~~~~ 193 (397)
T 2ord_A 124 KSEKKYRILSAHNSFHGRTL-GSLTATGQPKYQKPFEPLVPGFEYFE---------FNNVEDLRRKMSEDVCAVFLEPIQ 193 (397)
T ss_dssp HCTTCCEEEEEBTCCCCSSH-HHHHHSBCHHHHGGGCSCCTTEEEEC---------TTCHHHHHHHCCTTEEEEEECSEE
T ss_pred CCCCCceEEEEcCCcCCCch-hhhhccCChhhccccCCCCCCeeEec---------CCCHHHHHHHhhcCeEEEEEeccc
Confidence 5 4678777665544211 1122233 2 22221 13667776 67899999999999
Q ss_pred CCccc-cCC-----CCccc-cCCCcEEEEeccCc-CCC--Ccccccc----ccEEEeCCCcccc-CCccEEEEEcHHHHh
Q 043610 219 TIHGV-EFK-----EYPSA-KNSTGILVADMSSN-FCS--KPVDVTR----FGVIYAGAQKNVG-PSGVTIVIVRKDLLG 283 (430)
Q Consensus 219 t~tG~-~~p-----ei~~~-~~~g~~lvvD~a~s-~G~--~~idl~~----~d~~~~s~~K~~g-p~G~g~l~v~~~~~~ 283 (430)
|+||. ..+ +|.++ +++|+++++|++|+ ++. .++.+.. .|++ +++|++| ..++|+++++++++
T Consensus 194 nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~r~G~~~~~~~~~- 270 (397)
T 2ord_A 194 GESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVL--TTAKGLGGGVPIGAVIVNERAN- 270 (397)
T ss_dssp CTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGTTSCCEEEEECSTTC-
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCee--eeccccCCCcCeEEEEEchHhc-
Confidence 99999 666 45554 58999999999987 432 1233222 2555 5589997 23499999988764
Q ss_pred ccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC-CceecCCCCCC
Q 043610 284 NAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN-GFYKCPVEKSV 362 (430)
Q Consensus 284 ~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~-G~~~~~~~~~~ 362 (430)
.+.+. .. ....+.|...+.++.++|+.+.+ +++.++.+++++++++.|++.. ++..+. ....
T Consensus 271 ~l~~~-----------~~-~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~ 333 (397)
T 2ord_A 271 VLEPG-----------DH-GTTFGGNPLACRAGVTVIKELTK----EGFLEEVEEKGNYLMKKLQEMKEEYDVVA-DVRG 333 (397)
T ss_dssp CCCTT-----------SS-CCSSTTCHHHHHHHHHHHHHHTS----TTHHHHHHHHHHHHHHHHHHHHHHCTTEE-EEEE
T ss_pred ccCCC-----------Cc-CCCCCCCHHHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHHHHHHHhCCceE-EEEE
Confidence 43210 00 11235677788888888987542 4678888899999999987631 232210 0011
Q ss_pred CccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 363 RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 363 rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
.+ ..+.+.+++.....++.+.|.++||.+.++. .+.+||++...++++|+++++++|++++++
T Consensus 334 ~g-~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~--~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 334 MG-LMIGIQFREEVSNREVATKCFENKLLVVPAG--NNTIRFLPPLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp ET-TEEEEEECTTSCHHHHHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred Ee-EEEEEEECChHHHHHHHHHHHHCCCEEccCC--CCEEEEECCcCCCHHHHHHHHHHHHHHHhh
Confidence 22 4566777642223379999988999987652 457999998889999999999999998753
No 170
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.86 E-value=1.5e-20 Score=189.75 Aligned_cols=283 Identities=12% Similarity=0.044 Sum_probs=190.9
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEeCcHHHHH--HHHHhhcCCC------------CCcEEEEeCChhHHHHHHHHHHhC-C
Q 043610 118 EKAESDLRALLNIPQEYSVLFLQGGATTQF--AAVPLNLCTP------------NDPVDYIVTGSWGDKAFKEAQKFC-N 182 (430)
Q Consensus 118 ~~~r~~la~l~g~~~~~~vv~~~~gaT~a~--~~~~~sl~~~------------gd~vl~~~~g~~~~~~~~~a~~~g-~ 182 (430)
.++|+.++++++++++ +|++ ++|+++++ ..++..+..+ +|+|++..+++.++. ..++..| +
T Consensus 79 ~~lr~~ia~~~~~~~~-~i~~-t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~--~~~~~~g~~ 154 (422)
T 3d6k_A 79 ADIRELWAEALGLPAD-LVVA-QDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHF--TITEHFGFE 154 (422)
T ss_dssp HHHHHHHHHHHTCCGG-GEEE-CSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHH--HHHHHHTCE
T ss_pred HHHHHHHHHHhCCChh-HEEE-ecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHH--HHHHHcCCE
Confidence 4788999999999876 7776 47889987 5666666544 346888777776643 4456677 7
Q ss_pred ceEEecCCCCcCCCCCCccccc--cCC-CccEEE-EeecCCCccccCC-----CCccc-c-CCCcEEEEeccCc---CCC
Q 043610 183 PQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLH-ICANETIHGVEFK-----EYPSA-K-NSTGILVADMSSN---FCS 248 (430)
Q Consensus 183 ~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~-i~~~~t~tG~~~p-----ei~~~-~-~~g~~lvvD~a~s---~G~ 248 (430)
++.++..+ .| +|+++++ +++ ++++|+ +++++||||.+++ +|.++ + ++|+++++|++|+ ++.
T Consensus 155 ~~~v~~~~---~g--~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~ 229 (422)
T 3d6k_A 155 MINVPMTD---EG--PDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSD 229 (422)
T ss_dssp EEEEEEET---TE--ECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSS
T ss_pred EEecCCCC---CC--CCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCC
Confidence 77777643 23 7888887 554 789888 6899999999999 35554 5 7899999999997 322
Q ss_pred C-----cc-cc------ccccEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHH
Q 043610 249 K-----PV-DV------TRFGVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIY 314 (430)
Q Consensus 249 ~-----~i-dl------~~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~ 314 (430)
. ++ ++ .+..+++.|++|+ +.+| +|++++++++++.+.... . ....++|...+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~~~l~~~l~~~~----------~--~~~~~~~~~~q~ 296 (422)
T 3d6k_A 230 EFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFASSKENIEWYASHA----------N--VRGIGPNKLNQL 296 (422)
T ss_dssp CCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEECCHHHHHHHHHHH----------H--HHCSCCCHHHHH
T ss_pred CCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEEeCHHHHHHHHHHH----------H--hhcCCCCHHHHH
Confidence 1 22 11 1224889999999 4336 899999998877643200 0 011356777788
Q ss_pred HHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcc---CC-ceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcC
Q 043610 315 MCGLVFEYLLE-LGGLNEVEKMNRKKAELLYNVIDGS---NG-FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEK 389 (430)
Q Consensus 315 a~~~al~~l~~-~~g~~~v~~~~~~l~~~l~~~l~~~---~G-~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~G 389 (430)
++..+|+.... ...++.+++++++.++++++.|.+. .| +.+.. + . ....+.+.+++. ...++.+.|.++|
T Consensus 297 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~--p-~-~g~~~~~~~~~~-~~~~~~~~l~~~g 371 (422)
T 3d6k_A 297 AHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTS--P-T-GGYFISVDVVPG-TASRVVELAKEAG 371 (422)
T ss_dssp HHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECC--C-S-BSSCEEEEESTT-CHHHHHHHHHHTT
T ss_pred HHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeC--C-C-cceEEEEECCCC-CHHHHHHHHHHCC
Confidence 77777753100 0135566777777777777777642 22 44432 2 1 223455677642 2336777889999
Q ss_pred CeecC-CCC-------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 390 MVQLK-GHR-------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 390 i~~~~-g~~-------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
|.+.+ |.. ..+++|||++. +++++++++++.|++++++
T Consensus 372 V~v~~~g~~f~~~~~~~~~~iRis~~~-~~~e~i~~~~~~l~~~l~~ 417 (422)
T 3d6k_A 372 IALTGAGSSFPLHNDPNNENIRLAPSL-PPVAELEVAMDGFATCVLM 417 (422)
T ss_dssp EECCCTTTTSGGGCCTTSCEEEECCSS-SCHHHHHHHHHHHHHHHHH
T ss_pred eEEEcCccccCCCCCCCCCeEEEecCC-CCHHHHHHHHHHHHHHHHH
Confidence 99887 431 13589999997 8999999999999998764
No 171
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.86 E-value=1.2e-20 Score=189.73 Aligned_cols=275 Identities=15% Similarity=0.064 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCc
Q 043610 117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEK 193 (430)
Q Consensus 117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~ 193 (430)
.+++++.+++++|.+. . +++ ++|++|+..++. ++++||+|++....|.+.. +...++..| +++.++.
T Consensus 69 ~~~l~~~la~~~g~~~--~-i~~-~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~----- 138 (403)
T 3cog_A 69 RNCLEKAVAALDGAKY--C-LAF-ASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDC----- 138 (403)
T ss_dssp HHHHHHHHHHHHTCSE--E-EEE-SCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECT-----
T ss_pred HHHHHHHHHHHhCCCc--E-EEE-CCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECC-----
Confidence 5688999999999862 4 444 456799999988 8899999998877765532 222234567 6655543
Q ss_pred CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCC-cEEEEeccCcCCC--CccccccccEEEeCCCc
Q 043610 194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNST-GILVADMSSNFCS--KPVDVTRFGVIYAGAQK 265 (430)
Q Consensus 194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g-~~lvvD~a~s~G~--~~idl~~~d~~~~s~~K 265 (430)
.|+++++ +++++++|++++++|+||.+.| +|.++ +++| +++++|++++.+. .++++ ..|+++.|++|
T Consensus 139 ----~d~~~l~~~i~~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~~~-~~div~~S~sK 213 (403)
T 3cog_A 139 ----SKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLAL-GADISMYSATK 213 (403)
T ss_dssp ----TSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTTTT-TCSEEEEETTT
T ss_pred ----CCHHHHHHhcCcCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCCcccc-CCeEEEEcChh
Confidence 1567776 7889999999999999999999 78886 7899 9999999998775 45553 34899999999
Q ss_pred ccc-CCc--cEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610 266 NVG-PSG--VTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE 341 (430)
Q Consensus 266 ~~g-p~G--~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~ 341 (430)
++| |.| .|+++++ +++++.+.+. ... ..++++....+++..+++.+ +...++..+.+.
T Consensus 214 ~~~g~~~~~~G~v~~~~~~l~~~l~~~---~~~---------~g~~~~~~~~~~~~~~l~~l------~~r~~~~~~n~~ 275 (403)
T 3cog_A 214 YMNGHSDVVMGLVSVNCESLHNRLRFL---QNS---------LGAVPSPIDCYLCNRGLKTL------HVRMEKHFKNGM 275 (403)
T ss_dssp TTTCSSCCCCEEEEECCHHHHHHHHHH---HHH---------HCCCCCHHHHHHHHHHHTTH------HHHHHHHHHHHH
T ss_pred hccCCCCCeEEEEEECcHHHHHHHHHH---HHh---------cCCCCCHHHHHHHHhhhhHH------HHHHHHHHHHHH
Confidence 996 766 4999995 6776654210 000 11355666666665566532 333444444444
Q ss_pred HHHHHHHcc--------------CCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeec---CCC--------
Q 043610 342 LLYNVIDGS--------------NGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQL---KGH-------- 396 (430)
Q Consensus 342 ~l~~~l~~~--------------~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~---~g~-------- 396 (430)
.+.+.+++. +|+++..... .....+++|.+++. ..+..+.|.+.|+... .|.
T Consensus 276 ~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~-~~~g~~~~~~l~~~--~~~~~~~l~~~~i~~~~~s~G~~~sl~~~p 352 (403)
T 3cog_A 276 AVAQFLESNPWVEKVIYPGLPSHPQHELVKRQC-TGCTGMVTFYIKGT--LQHAEIFLKNLKLFTLAESLGGFESLAELP 352 (403)
T ss_dssp HHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHC-SCCCSEEEEEESSC--HHHHHHHHHHCSSSEECSCCSSSSCEEECT
T ss_pred HHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcC-CCCceEEEEEecCC--HHHHHHHHHhCCcceEccCCCCcceeeecc
Confidence 555555432 1222221000 11245788888642 2345556677787532 120
Q ss_pred -----C------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610 397 -----R------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 397 -----~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~ 427 (430)
. ..+.||+|++..+++++|+++.++|+++++
T Consensus 353 ~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~~~~ 400 (403)
T 3cog_A 353 AIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAHP 400 (403)
T ss_dssp TTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHCC
T ss_pred cccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHHhhc
Confidence 0 135799999999999999999999987653
No 172
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.86 E-value=1.3e-20 Score=190.36 Aligned_cols=284 Identities=11% Similarity=0.028 Sum_probs=193.0
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEeCcHHHHH--HHHHhhcCC--C----------CCcEEEEeCChhHHHHHHHHHHhC-C
Q 043610 118 EKAESDLRALLNIPQEYSVLFLQGGATTQF--AAVPLNLCT--P----------NDPVDYIVTGSWGDKAFKEAQKFC-N 182 (430)
Q Consensus 118 ~~~r~~la~l~g~~~~~~vv~~~~gaT~a~--~~~~~sl~~--~----------gd~vl~~~~g~~~~~~~~~a~~~g-~ 182 (430)
.++|+.++++++++++ +|++ ++|+++++ +.++..++. | ||+|++..+++.++. ..++..| +
T Consensus 81 ~~lr~~ia~~~~~~~~-~i~~-t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~--~~~~~~g~~ 156 (427)
T 3ppl_A 81 VDIRQIWADLLGVPVE-QVLA-GDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHF--SITERFGFE 156 (427)
T ss_dssp HHHHHHHHHHHTSCGG-GEEE-CSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHH--HHHHHTTCE
T ss_pred HHHHHHHHHHhCCCcc-eEEE-eCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHH--HHHHHcCCE
Confidence 4788999999999876 7776 57899999 577777765 6 899998888776643 4566678 8
Q ss_pred ceEEecCCCCcCCCCCCccccc--c-CCCccEEEEe-ecCCCccccCC-----CCcc-c-cCCCcEEEEeccCcC---CC
Q 043610 183 PQVIWSGKAEKYTKIPNFDALE--Q-NPDAKYLHIC-ANETIHGVEFK-----EYPS-A-KNSTGILVADMSSNF---CS 248 (430)
Q Consensus 183 ~~~v~~~~~~~~g~~~d~~~l~--i-~~~~~lv~i~-~~~t~tG~~~p-----ei~~-~-~~~g~~lvvD~a~s~---G~ 248 (430)
++.++..+ .| +|+++++ + .+++++|+++ +++||||.++| +|.+ + +++|+++|+|++|+. +.
T Consensus 157 ~~~v~~~~---~g--~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~ 231 (427)
T 3ppl_A 157 MISVPMNE---DG--PDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTD 231 (427)
T ss_dssp EEEEEEET---TE--ECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSS
T ss_pred EEEeCCCC---CC--CCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCC
Confidence 88887753 23 7888887 5 4789988865 78999999999 3555 3 589999999999874 22
Q ss_pred C---ccccc---------cccEEEeCCCccccC-CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHH
Q 043610 249 K---PVDVT---------RFGVIYAGAQKNVGP-SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYM 315 (430)
Q Consensus 249 ~---~idl~---------~~d~~~~s~~K~~gp-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a 315 (430)
. ++++. +..+++.|++|+++| .++|+++.++++++.+.. .. . ....+++...+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~l~~~~~~-------~~---~--~~~~~~~~~~q~~ 299 (427)
T 3ppl_A 232 EFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAENRKWYTG-------HA---G--IRGIGPNKVNQLA 299 (427)
T ss_dssp CCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHHHHHHHHH-------HH---H--HHCSCCCHHHHHH
T ss_pred CCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHHHHHHHHH-------Hh---h--cccCCCCHHHHHH
Confidence 1 22221 224889999999543 348999999988776421 00 0 0112445566666
Q ss_pred HHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHcc----CCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCC
Q 043610 316 CGLVFEYLL-ELGGLNEVEKMNRKKAELLYNVIDGS----NGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKM 390 (430)
Q Consensus 316 ~~~al~~l~-~~~g~~~v~~~~~~l~~~l~~~l~~~----~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi 390 (430)
+..+++... -...++...++++++++.+.+.|.+. .++.+.. + .....+.+.+++. ...++.+.|.++||
T Consensus 300 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~--p--~~g~~~~~~~~~~-~~~~~~~~l~~~gv 374 (427)
T 3ppl_A 300 HARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTV--P--AGGYFISLDVVPG-TASRVAELAKEAGI 374 (427)
T ss_dssp HHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECC--C--SBSSCEEEECSTT-CHHHHHHHHHHTTE
T ss_pred HHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeC--C--CccEEEEEECCcc-hHHHHHHHHHHCCC
Confidence 666664310 01135566667777777777766542 1344432 2 1234566777753 23378888999999
Q ss_pred eecC-CCC-------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 391 VQLK-GHR-------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 391 ~~~~-g~~-------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
.+.+ |.. ..+++|||+... ++++++++++.|++++++
T Consensus 375 ~v~~~g~~~~~~~~~~~~~~Ris~~~~-~~~~i~~~~~~l~~~l~~ 419 (427)
T 3ppl_A 375 ALTGAGSSYPLRQDPENKNLRLAPSLP-PVEELEVAMDGVATCVLL 419 (427)
T ss_dssp ECCCTTTTSGGGCCTTSCEEEECCSSS-CHHHHHHHHHHHHHHHHH
T ss_pred EEecCcCcCCCCCCCCCCeEEEECCCC-CHHHHHHHHHHHHHHHHH
Confidence 9887 321 246899999644 899999999999988764
No 173
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.85 E-value=2.3e-20 Score=186.92 Aligned_cols=276 Identities=11% Similarity=0.022 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-HH-HHHHHhC-CceEEecCCC
Q 043610 115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-AF-KEAQKFC-NPQVIWSGKA 191 (430)
Q Consensus 115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~~-~~a~~~g-~~~~v~~~~~ 191 (430)
...+++++.+++++|.+ +++++ +||++|++.++.+++++||+|++....|.+.. .. ...+..| ++..++.
T Consensus 66 ~~~~~l~~~la~~~g~~---~~~~~-~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~--- 138 (392)
T 3qhx_A 66 PTRTALEAALAAVEDAA---FGRAF-SSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVAL--- 138 (392)
T ss_dssp HHHHHHHHHHHHHTTCS---EEEEE-SSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECT---
T ss_pred hHHHHHHHHHHHHhCCC---cEEEE-CCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCC---
Confidence 34668999999999986 56665 67899999999999999999998777765532 11 2224456 5555543
Q ss_pred CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--ccccccccEEEeCCC
Q 043610 192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--PVDVTRFGVIYAGAQ 264 (430)
Q Consensus 192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~~ 264 (430)
.|+++++ +.+++++|++.+++|++|.+.| +|.++ +++|+++++|++|+.+.. ++++ ..|+++.|+|
T Consensus 139 ------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~~~~~~-~~di~~~S~s 211 (392)
T 3qhx_A 139 ------ADLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQQPLSL-GADVVLHSTT 211 (392)
T ss_dssp ------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGG-TCSEEEEETT
T ss_pred ------CCHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccCChHHh-CCcEEEEcCc
Confidence 2567776 7889999999999999999999 78886 689999999999986643 2222 2389999999
Q ss_pred ccccCCc---cEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043610 265 KNVGPSG---VTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKA 340 (430)
Q Consensus 265 K~~gp~G---~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~ 340 (430)
|++|++| .|+++.+ +++.+.+.. +. .. ...+++....+.+...++ .++...++..+.+
T Consensus 212 K~lg~~g~~~~G~v~~~~~~~~~~l~~-------~~--~~---~g~~~~~~~~~~~~~~l~------~l~~~~~~~~~~~ 273 (392)
T 3qhx_A 212 KYIGGHSDVVGGALVTNDEELDQSFAF-------LQ--NG---AGAVPGPFDAYLTMRGLK------TLVLRMQRHSENA 273 (392)
T ss_dssp TTTTCSSCCCCEEEEESCHHHHHHHHH-------HH--HH---HCCCCCHHHHHHHHHHHT------THHHHHHHHHHHH
T ss_pred cccCCCCCceEEEEEECcHHHHHHHHH-------HH--Hh---cCCCCCHHHHHHHHhhhh------HHHHHHHHHHHHH
Confidence 9998766 7999987 466554321 00 00 112344444444444443 2455567777788
Q ss_pred HHHHHHHHccCCceec--CCCCC-----------CCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCC----------
Q 043610 341 ELLYNVIDGSNGFYKC--PVEKS-----------VRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGH---------- 396 (430)
Q Consensus 341 ~~l~~~l~~~~G~~~~--~~~~~-----------~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~---------- 396 (430)
+.+.+.|.+.+++..+ +.-+. .....+++|.+++..... .|+..|+..|+.+..|.
T Consensus 274 ~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~ 353 (392)
T 3qhx_A 274 AAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLGSVESLIEHPSA 353 (392)
T ss_dssp HHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCCCCSSCEEECGGG
T ss_pred HHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCCCCCCceeeCccc
Confidence 8888888875544322 11011 112457889987521222 56666665554432221
Q ss_pred ------------CCCCeeEEeecCCCCHHHHHHHHHHH
Q 043610 397 ------------RSVGGMRASIYNAMPLAGVEKLVAFM 422 (430)
Q Consensus 397 ------------~~~g~iRis~~~~~t~edv~~ll~~L 422 (430)
...+.||+|++..+++++++.+.++|
T Consensus 354 ~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 354 MTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQAL 391 (392)
T ss_dssp TSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred ccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence 12346999999988888888888776
No 174
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.85 E-value=4.4e-21 Score=191.30 Aligned_cols=317 Identities=14% Similarity=0.055 Sum_probs=202.5
Q ss_pred CceeecCCC-------CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh---C---CCCCcEE
Q 043610 70 RVFNFAAGP-------ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL---N---IPQEYSV 136 (430)
Q Consensus 70 ~~~l~~~gp-------~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~---g---~~~~~~v 136 (430)
.+++|+.|- .++++.|++++.+.+.+.. .+++++. .-..++|+.+++++ + ++++ +|
T Consensus 27 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~--~g~~~lr~~la~~~~~~~~~~~~~~-~v 95 (396)
T 2q7w_A 27 GKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET--------TKNYLGI--DGIPEFGRCTQELLFGKGSALINDK-RA 95 (396)
T ss_dssp -CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCC--------CCCCCCT--TCCHHHHHHHHHHHHCTTCHHHHTT-CE
T ss_pred CceecccccccCCCCCccCcHHHHHHHHhhcCccc--------ccCCCCC--CCCHHHHHHHHHHHhcCCCCccccc-cE
Confidence 456666653 3567899999988765311 1111111 11236677777777 2 1244 67
Q ss_pred EE-EeCcHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC---
Q 043610 137 LF-LQGGATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP--- 207 (430)
Q Consensus 137 v~-~~~gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~--- 207 (430)
++ .++|++++++.++..+ +.+||+|++..+++.++. ..++..| +++.++.... .+..+|+++++ +++
T Consensus 96 ~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~l~~~~~ 171 (396)
T 2q7w_A 96 RTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHK--SVFNSAGLEVREYAYYDA--ENHTLDFDALINSLNEAQA 171 (396)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHH--HHHHHTTCEEEEEECEET--TTTEECHHHHHHHHTTCCT
T ss_pred EEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHH--HHHHHcCCceEEEecccC--CCCCcCHHHHHHHHHhCCC
Confidence 65 2589999999987655 368999999888877643 4456677 7777776321 12246788876 443
Q ss_pred CccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCC-------ccc-cccc---cEEEeCCCccccCC
Q 043610 208 DAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSK-------PVD-VTRF---GVIYAGAQKNVGPS 270 (430)
Q Consensus 208 ~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~-------~id-l~~~---d~~~~s~~K~~gp~ 270 (430)
+++++++++++|+||.+++ + |.++ +++|+++++|++|+.... ++. +... .+++.|++|++|++
T Consensus 172 ~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 251 (396)
T 2q7w_A 172 GDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLY 251 (396)
T ss_dssp TCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCG
T ss_pred CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEecccccccc
Confidence 5788999999999999998 3 4444 578999999999764322 221 2221 37789999999988
Q ss_pred c--cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHH--HH--hcCHHHHHHHHHHHHH
Q 043610 271 G--VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYL--LE--LGGLNEVEKMNRKKAE 341 (430)
Q Consensus 271 G--~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l--~~--~~g~~~v~~~~~~l~~ 341 (430)
| +|++++ +++.++.+.. .+ ... .....+++|...+.++..+|+.. .+ ...++.+.++++++++
T Consensus 252 G~riG~~~~~~~~~~~~~~~~~----~~--~~~--~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 323 (396)
T 2q7w_A 252 NERVGACTLVAADSETVDRAFS----QM--KAA--IRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQ 323 (396)
T ss_dssp GGCCEEEEEECSSHHHHHHHHH----HH--HHH--HHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHH
T ss_pred ccccceEEEEcCCHHHHHHHHH----HH--HHH--HhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHH
Confidence 9 699997 5644332110 00 000 00123456777888887777542 00 1246788899999999
Q ss_pred HHHHHHHccCC----ceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHH
Q 043610 342 LLYNVIDGSNG----FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEK 417 (430)
Q Consensus 342 ~l~~~l~~~~G----~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ 417 (430)
++++.|++ .| +++.. + .....+.+.++ ...+...|.++||.+.+| +|||++. .+++|+++
T Consensus 324 ~l~~~L~~-~~~~~~~~~~~--~--~~~~~~~~~~~----~~~~~~~l~~~gv~v~~~------~Ris~~~-~~~e~i~~ 387 (396)
T 2q7w_A 324 LFVNTLQE-KGANRDFSFII--K--QNGMFSFSGLT----KEQVLRLREEFGVYAVAS------GRVNVAG-MTPDNMAP 387 (396)
T ss_dssp HHHHHHHH-TTCCSCCTHHH--H--CCSSEEECCCC----HHHHHHHHHHHCEECCTT------CEEEGGG-CCTTTHHH
T ss_pred HHHHHHHh-cCCCCCcceec--C--CCceEEEecCC----HHHHHHHHHhcCeeecCC------ceEEEee-cCHHHHHH
Confidence 99999987 44 54432 1 12222222222 224555677889998753 7999985 48999999
Q ss_pred HHHHHHHH
Q 043610 418 LVAFMKDF 425 (430)
Q Consensus 418 ll~~L~~~ 425 (430)
++++|+++
T Consensus 388 ~~~~l~~~ 395 (396)
T 2q7w_A 388 LCEAIVAV 395 (396)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999875
No 175
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.85 E-value=1.1e-20 Score=189.03 Aligned_cols=320 Identities=10% Similarity=0.027 Sum_probs=207.7
Q ss_pred CCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610 68 EDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG 142 (430)
Q Consensus 68 ~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g 142 (430)
.+..+++..|. +..++.|++++.+.+.+....+ ..... ...+++++.+++++|.+ +++++ +|
T Consensus 38 g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~------~~~~~---~~~~~l~~~la~~~~~~---~v~~~-~g 104 (406)
T 4adb_A 38 GKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTG------NGYTN---EPVLRLAKKLIDATFAD---RVFFC-NS 104 (406)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCC------TTSCC---HHHHHHHHHHHHHSSCS---EEEEE-SS
T ss_pred CCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccccc------CCcCC---HHHHHHHHHHHhhCCCC---eEEEe-Cc
Confidence 34455555541 1238899999999886522111 01111 33568889999999864 67775 78
Q ss_pred HHHHHHHHHhhcCC-------CC-CcEEEEeCChhHHHHHHHHHHhC-CceE----EecCCCCcCC--CCCCccccc--c
Q 043610 143 ATTQFAAVPLNLCT-------PN-DPVDYIVTGSWGDKAFKEAQKFC-NPQV----IWSGKAEKYT--KIPNFDALE--Q 205 (430)
Q Consensus 143 aT~a~~~~~~sl~~-------~g-d~vl~~~~g~~~~~~~~~a~~~g-~~~~----v~~~~~~~~g--~~~d~~~l~--i 205 (430)
+++|++.++..+.. +| |+|++..+++.+... .+...+ .... .+... +.. ...|+++|+ +
T Consensus 105 g~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~l 180 (406)
T 4adb_A 105 GAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTL--FTVSAGGQPAYSQDFAPLPA--DIRHAAYNDINSASALI 180 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSH--HHHHHSSCGGGTGGGCSCCS--SEEEECTTCHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcH--HHhhccCCccccccCCCCCC--CceEeCCCcHHHHHHHh
Confidence 99999998887743 55 888887776655321 122222 2111 11100 000 014667776 6
Q ss_pred CCCccEEEEeecCCCccccC--C-----CCccc-cCCCcEEEEeccCc-CCC--Cccccc--cc--cEEEeCCCccccCC
Q 043610 206 NPDAKYLHICANETIHGVEF--K-----EYPSA-KNSTGILVADMSSN-FCS--KPVDVT--RF--GVIYAGAQKNVGPS 270 (430)
Q Consensus 206 ~~~~~lv~i~~~~t~tG~~~--p-----ei~~~-~~~g~~lvvD~a~s-~G~--~~idl~--~~--d~~~~s~~K~~gp~ 270 (430)
++++++|+++ ++|++|.++ + +|.++ +++|+++++|++|+ +|. .++.++ +. |++ +++|++| +
T Consensus 181 ~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~-~ 256 (406)
T 4adb_A 181 DDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL--TTAKALG-G 256 (406)
T ss_dssp STTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG-T
T ss_pred cCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE--Eechhhc-C
Confidence 7889999998 778888776 4 45554 58999999999985 432 222222 22 455 4599998 5
Q ss_pred c--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 043610 271 G--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVID 348 (430)
Q Consensus 271 G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~ 348 (430)
| +|++++++++++.+.+.. . ....+.+...+.++.++|+.+.+ +++.++++++++++++.|+
T Consensus 257 G~r~G~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~l~~~l~ 320 (406)
T 4adb_A 257 GFPVGALLATEECARVMTVGT-----------H-GTTYGGNPLASAVAGKVLELINT----PEMLNGVKQRHDWFVERLN 320 (406)
T ss_dssp TSCCEEEEECHHHHHTCCTTS-----------S-CCSSTTCHHHHHHHHHHHHHHSS----HHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEcHHHHhhhccCC-----------c-CCCCCCCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHH
Confidence 6 899999999987654311 0 11235677788888888886531 6888899999999999998
Q ss_pred ccCC-ceecCCCCCCCccceEEEEcCCCc--hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610 349 GSNG-FYKCPVEKSVRSFMNVPFTLEKSD--LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF 425 (430)
Q Consensus 349 ~~~G-~~~~~~~~~~rs~~iv~f~~~~~~--~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~ 425 (430)
+... +.... +.. .....+.+.+++.. ...++.+.|.++||.+.++. .+.+|+++...++++|++++++.|+++
T Consensus 321 ~~~~~~~~~~-~~~-~~g~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~--~~~iRi~~~~~~~~e~i~~~~~~l~~~ 396 (406)
T 4adb_A 321 TINHRYGLFS-EVR-GLGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAG--GNVVRFAPALNVSEEEVTTGLDRFAAA 396 (406)
T ss_dssp HHHHHHCCEE-EEE-EETTEEEEEECTTTTTCHHHHHHHHHHTTEECEESS--TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCce-EEE-EEEEEEEEEEeCCcHHHHHHHHHHHHHCCcEEeecC--CCeEEEECCCCCCHHHHHHHHHHHHHH
Confidence 6311 11111 111 12245667776421 23379999999999987643 458999999899999999999999998
Q ss_pred HHh
Q 043610 426 QAK 428 (430)
Q Consensus 426 ~~~ 428 (430)
+++
T Consensus 397 l~~ 399 (406)
T 4adb_A 397 CEH 399 (406)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 176
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.85 E-value=8.6e-21 Score=188.77 Aligned_cols=308 Identities=8% Similarity=-0.016 Sum_probs=191.6
Q ss_pred CceeecC--CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610 70 RVFNFAA--GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF 147 (430)
Q Consensus 70 ~~~l~~~--gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~ 147 (430)
.+|+++. |+.++++.|++++..+. .+. ...+++++.+++++|+++..+++++ +|+|+++
T Consensus 29 ~v~~~~~~~~~~~~~~~v~~a~~~~~----------------~~~--~~~~~~~~~~a~~~g~~~~~~~~~~-~ggt~a~ 89 (374)
T 2aeu_A 29 ALYDLSGLSGGFLIDEKDKALLNTYI----------------GSS--YFAEKVNEYGLKHLGGDENDKCVGF-NRTSSAI 89 (374)
T ss_dssp GCEECSSCCCCCCCCHHHHHHHTSTT----------------HHH--HHHHHHHHHHHHHHTCCTTEEEEEE-SSHHHHH
T ss_pred ceeeecccCCCCCCCHHHHHHHHHhc----------------Cch--HHHHHHHHHHHHHhCCCCcceEEEE-cChHHHH
Confidence 4777665 47899999999986211 111 1225667777889998421267665 8899999
Q ss_pred HHHHhhcCCCCCcEEEEeCChhHH-HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-cCCCccE-EEEeecCCCcc-
Q 043610 148 AAVPLNLCTPNDPVDYIVTGSWGD-KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-QNPDAKY-LHICANETIHG- 222 (430)
Q Consensus 148 ~~~~~sl~~~gd~vl~~~~g~~~~-~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-i~~~~~l-v~i~~~~t~tG- 222 (430)
..++.++ +||+|++..+++.++ .+++.++..| +++.+ . |+++++ .++++++ |++++++|+||
T Consensus 90 ~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v-~----------d~~~l~~~~~~~~~~v~~~~p~nptG~ 156 (374)
T 2aeu_A 90 LATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES-D----------KVGEILNKIDKDTLVIITGSTMDLKVI 156 (374)
T ss_dssp HHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE-S----------CHHHHHTTCCTTEEEEEECBCTTSCBC
T ss_pred HHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe-C----------CHHHHHhcCCCccEEEEEccCCCCCCC
Confidence 9999987 899999887754332 2233455667 55544 1 344554 4567999 99999999999
Q ss_pred ccCC--CCccc-cCCCcEEEEeccCcCCC-----C--ccccccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCcc
Q 043610 223 VEFK--EYPSA-KNSTGILVADMSSNFCS-----K--PVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLM 292 (430)
Q Consensus 223 ~~~p--ei~~~-~~~g~~lvvD~a~s~G~-----~--~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~ 292 (430)
...+ +|.++ +++|+++++|++++.+. . ++++ ..|++++|+||+++..++|+++.++++++.+...
T Consensus 157 ~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~di~~~S~sK~l~g~~~G~~~~~~~~~~~l~~~---- 231 (374)
T 2aeu_A 157 ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKL-GADLVVTSTDKLMEGPRGGLLAGKKELVDKIYIE---- 231 (374)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHH-TCSEEEEETTSSSSSCSCEEEEEEHHHHHHHHHH----
T ss_pred CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCcccc-CCcEEEecCcccccCcceEEEEECHHHHHHHHHh----
Confidence 5656 67775 68999999999887653 1 1221 2379999999999534779999999988764320
Q ss_pred ccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH----HHHHHHHHHcc---CCceecCCCCCCCcc
Q 043610 293 LDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKK----AELLYNVIDGS---NGFYKCPVEKSVRSF 365 (430)
Q Consensus 293 ~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l----~~~l~~~l~~~---~G~~~~~~~~~~rs~ 365 (430)
. . ...++++...++++..+++.+.. .-++...++.+.+ .+.+.+.|.+. .|+.+.+ .+ ..
T Consensus 232 ---~---~--~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~-~~---~g 298 (374)
T 2aeu_A 232 ---G---T--KFGLEAQPPLLAGIYRALKNFNL-ERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYER-TP---TG 298 (374)
T ss_dssp ---H---H--TTTCBCCHHHHHHHHHHHHHCCH-HHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEE-CS---SE
T ss_pred ---h---c--cccCCCCHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceee-CC---ce
Confidence 0 0 11135677777888888875311 0112222223333 35555555432 2444321 11 11
Q ss_pred ceEEE-EcCCCchh----HHHHHH-HHHcCCeecCCCCC---CCeeEEeecC-CCCHHHHHHHHHHHHHHHHh
Q 043610 366 MNVPF-TLEKSDLE----AEFVKE-AAKEKMVQLKGHRS---VGGMRASIYN-AMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 366 ~iv~f-~~~~~~~~----~~~~~~-L~~~Gi~~~~g~~~---~g~iRis~~~-~~t~edv~~ll~~L~~~~~~ 428 (430)
..+.. ..++ ..+ .++... |.++||.+.+|... .+++||+++. ...++++++++++|++.++.
T Consensus 299 ~~~~~~~~~~-~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~ 370 (374)
T 2aeu_A 299 FVIKRVYKDD-TINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKM 370 (374)
T ss_dssp EEEEEEESSH-HHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHH
T ss_pred EEEEeecccc-cccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHH
Confidence 22221 1221 111 126544 45689998876432 3479999875 22344599999999998765
No 177
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.85 E-value=1.2e-20 Score=203.41 Aligned_cols=294 Identities=12% Similarity=0.022 Sum_probs=206.9
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCc
Q 043610 115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEK 193 (430)
Q Consensus 115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~ 193 (430)
..+.+.++.+++++|.+. . +++++|+++++.+++.++++|||+|++..+.|.+... .++..| ++++++...+ .
T Consensus 205 g~v~~~ee~la~l~G~d~--~-i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~--~~~~~G~~~v~v~~~~~-~ 278 (755)
T 2vyc_A 205 GAFGESEKYAARVFGADR--S-WSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQ--GLMLTGAKPVYMVPSRN-R 278 (755)
T ss_dssp HHHHHHHHHHHHHHTCSE--E-EEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--HHHHHCCEEEEECCCBC-T
T ss_pred cHHHHHHHHHHHHhCCCc--e-EEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHH--HHHHcCCEEEEEeCCCC-c
Confidence 456788999999999863 4 5556888899999999999999999998888877532 244567 7777766432 2
Q ss_pred CC--CCC-----Cccccc--c--CCCcc--------EEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--
Q 043610 194 YT--KIP-----NFDALE--Q--NPDAK--------YLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK-- 249 (430)
Q Consensus 194 ~g--~~~-----d~~~l~--i--~~~~~--------lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~-- 249 (430)
++ ..+ |+++++ + .++++ +++++++ |++|.+.| +|.++ +++|+++++|++|+.+..
T Consensus 279 ~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~ 357 (755)
T 2vyc_A 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFN 357 (755)
T ss_dssp TSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGC
T ss_pred cccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhcccC
Confidence 33 124 777776 4 34555 8999986 78999999 78886 789999999999864211
Q ss_pred c----c-cccc--cc------EEEeCCCccc-cCCccEEEEEcHH--HHhccCCCCCccccccchhhcCCCCCCccHHHH
Q 043610 250 P----V-DVTR--FG------VIYAGAQKNV-GPSGVTIVIVRKD--LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCI 313 (430)
Q Consensus 250 ~----i-dl~~--~d------~~~~s~~K~~-gp~G~g~l~v~~~--~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~ 313 (430)
+ . .+.. .| +++.|+||++ ||.|.|+++++++ .++.. .+..... ....+||++..+
T Consensus 358 ~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~--------~~~~~~~-~~~s~sp~~~~i 428 (755)
T 2vyc_A 358 PIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFS--------RFNQAYM-MHATTSPLYAIC 428 (755)
T ss_dssp GGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHH--------HHHHHHH-HTSCSSCCHHHH
T ss_pred cccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHH--------HHHHHHH-HhCCCCHHHHHH
Confidence 1 0 0111 24 4999999999 5888899998765 21100 0000001 122368999999
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCC---------ceecCCCC------------------------
Q 043610 314 YMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNG---------FYKCPVEK------------------------ 360 (430)
Q Consensus 314 ~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G---------~~~~~~~~------------------------ 360 (430)
+++..|++++... |.++..++..+++++++++|.+..| ++++....
T Consensus 429 aal~aA~~~l~~~-gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (755)
T 2vyc_A 429 ASNDVAVSMMDGN-SGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQ 507 (755)
T ss_dssp HHHHHHHHHHSTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCG
T ss_pred HHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchh
Confidence 9999999987643 3467888999999999999987555 55543110
Q ss_pred ------------------C---CCccceEEEEcCCC---------chhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCC
Q 043610 361 ------------------S---VRSFMNVPFTLEKS---------DLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNA 409 (430)
Q Consensus 361 ------------------~---~rs~~iv~f~~~~~---------~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~ 409 (430)
. ...+..++|.+++. +.+. ++.+.|+++||++.. ...+.+|++++..
T Consensus 508 ~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~--~~~~~v~~~~~~g 585 (755)
T 2vyc_A 508 DCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTR--TTDFQIMFLFSMG 585 (755)
T ss_dssp GGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSE--ECSSEEEEECCTT
T ss_pred hhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEee--cCCCeEEEEECCC
Confidence 0 00245778887731 2333 677889889988643 2345799999999
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 043610 410 MPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 410 ~t~edv~~ll~~L~~~~~ 427 (430)
+|++++++++++|+++.+
T Consensus 586 ~t~~~~~~l~~al~~~~~ 603 (755)
T 2vyc_A 586 VTRGKWGTLVNTLCSFKR 603 (755)
T ss_dssp CCTTTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 999999999999999865
No 178
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.85 E-value=3.7e-20 Score=186.52 Aligned_cols=316 Identities=8% Similarity=-0.047 Sum_probs=197.5
Q ss_pred CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHh---hcCCC
Q 043610 81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPL---NLCTP 157 (430)
Q Consensus 81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~---sl~~~ 157 (430)
.++.|++++.+.+.+... +. . .+.+ .....++++.|+++++.+...+|+++ +|++++++.++. .+.++
T Consensus 58 ~~~~v~~a~~~~~~~~~~-~~----~-~~~~--~~~~~~l~~~la~~~~~~~~~~v~~~-~g~~~a~~~~~~~a~~~~~~ 128 (426)
T 1sff_A 58 LHPKVVAAVEAQLKKLSH-TC----F-QVLA--YEPYLELCEIMNQKVPGDFAKKTLLV-TTGSEAVENAVKIARAATKR 128 (426)
T ss_dssp TCHHHHHHHHHHTTTCSC-CC----T-TTEE--CHHHHHHHHHHHHHSSCSSCEEEEEE-SSHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHhCCC-cc----c-cccC--CHHHHHHHHHHHHhCCcccccEEEEe-CchHHHHHHHHHHHHHhhCC
Confidence 678999999988754211 11 0 1111 13456888999999932221267665 789999999877 55566
Q ss_pred CCcEEEEeCChhHHHHHHHHHHhC-C-------------ceEEecCCC-CcCCCCCCccccc--cC-----CCccEEEEe
Q 043610 158 NDPVDYIVTGSWGDKAFKEAQKFC-N-------------PQVIWSGKA-EKYTKIPNFDALE--QN-----PDAKYLHIC 215 (430)
Q Consensus 158 gd~vl~~~~g~~~~~~~~~a~~~g-~-------------~~~v~~~~~-~~~g~~~d~~~l~--i~-----~~~~lv~i~ 215 (430)
| +|++..+++.+... ......| + ++.++...+ .+.+..+|+++|+ ++ +++++|++.
T Consensus 129 ~-~vi~~~p~y~~~~~-~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~ 206 (426)
T 1sff_A 129 S-GTIAFSGAYHGRTH-YTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIE 206 (426)
T ss_dssp C-EEEEETTCCCCSSH-HHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEEC
T ss_pred C-eEEEECCCcCCCch-HhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEe
Confidence 6 77776666544321 1112223 2 344554310 0001124667776 43 567888775
Q ss_pred ecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--c--ccccc--ccEEEeCCCccccCCc--cEEEEEcH
Q 043610 216 ANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--P--VDVTR--FGVIYAGAQKNVGPSG--VTIVIVRK 279 (430)
Q Consensus 216 ~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~--idl~~--~d~~~~s~~K~~gp~G--~g~l~v~~ 279 (430)
.+.+.||...+ +|.++ +++|+++++|++|+ ++.. . ++... .|++ +++|++|+ | +|++++++
T Consensus 207 p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~-GlriG~~~~~~ 283 (426)
T 1sff_A 207 PVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLT--TFAKSIAG-GFPLAGVTGRA 283 (426)
T ss_dssp SBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEE--EECGGGGT-SSCCEEEEEEH
T ss_pred cccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCCCCEE--EEcccccC-CCceEEEEEcH
Confidence 54444995544 34554 58999999999988 4321 1 22222 2444 77899998 8 69999999
Q ss_pred HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC-CceecCC
Q 043610 280 DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN-GFYKCPV 358 (430)
Q Consensus 280 ~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~-G~~~~~~ 358 (430)
++++.+.+.. .. ...+.|...+.++.++|+++.+ + ...++.+++++++++.|.+.. .+..+..
T Consensus 284 ~~~~~l~~~~-----------~~-~~~~~~~~~~~a~~aal~~~~~-~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 347 (426)
T 1sff_A 284 EVMDAVAPGG-----------LG-GTYAGNPIACVAALEVLKVFEQ-E---NLLQKANDLGQKLKDGLLAIAEKHPEIGD 347 (426)
T ss_dssp HHHTTSCTTS-----------BC-CSSSSCHHHHHHHHHHHHHHHH-T---THHHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred HHHhhhccCC-----------cC-cCCCCCHHHHHHHHHHHHHHHh-c---CHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 9877653210 01 1135677888888899998764 2 456778888888888887521 0211100
Q ss_pred CCCCCccceEEEEcCC-------CchhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 359 EKSVRSFMNVPFTLEK-------SDLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 359 ~~~~rs~~iv~f~~~~-------~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
... .+ ..+.+.+++ .+.+. ++.+.|.++||.+.+|....+++||+++.+++++|+++++++|++++++
T Consensus 348 ~~~-~g-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~ 423 (426)
T 1sff_A 348 VRG-LG-AMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCFDE 423 (426)
T ss_dssp EEE-ET-TEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEE-EE-EEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCCCCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 011 23 355667631 11223 6888898899998876544568999999889999999999999998764
No 179
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.85 E-value=5.6e-20 Score=187.24 Aligned_cols=316 Identities=12% Similarity=0.071 Sum_probs=200.3
Q ss_pred eeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh-CCC-----CCcEEEE--EeCcH
Q 043610 72 FNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL-NIP-----QEYSVLF--LQGGA 143 (430)
Q Consensus 72 ~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~-g~~-----~~~~vv~--~~~ga 143 (430)
|++..++.++.+.|.+++.+...+ ...+...|.. ..+ ..++|+.+++++ |.+ ++ +|++ + +|+
T Consensus 59 ~~d~~~~~~v~~av~~a~~~~~~~-~~~~~~~Y~~-~~G------~~~lr~~ia~~l~g~~~~~~~~~-~i~~~~t-~gg 128 (448)
T 3meb_A 59 YRDESGKPWILPAVKEAEAIISSD-LSKYNKEYPP-VAG------FPLFLEAAQFLMFGKDSKAAQEG-RIASCQS-LSG 128 (448)
T ss_dssp CCCTTSCCCCCHHHHHHHHHHHHC-TTTTCCSCCC-TTC------CHHHHHHHHHHHHCTTCHHHHTT-CEEEEEE-SHH
T ss_pred ccCCCCCEechHHHHHHHHHHhhc-ccCCCCCCCC-Ccc------hHHHHHHHHHHhcCCCccccCcC-cEEEEEC-CcH
Confidence 344456667788888886654310 0011111111 011 236667777776 876 44 6766 5 789
Q ss_pred HHHHHH--HHhhcCCCCCcEEEEeCChhHHHHHHHHH----HhC-CceEEecCCCCcC-CCCCCccccc--cC---CCcc
Q 043610 144 TTQFAA--VPLNLCTPNDPVDYIVTGSWGDKAFKEAQ----KFC-NPQVIWSGKAEKY-TKIPNFDALE--QN---PDAK 210 (430)
Q Consensus 144 T~a~~~--~~~sl~~~gd~vl~~~~g~~~~~~~~~a~----~~g-~~~~v~~~~~~~~-g~~~d~~~l~--i~---~~~~ 210 (430)
|++++. .+.+++.+||+|++..+++.++. ..++ ..| +++.++..++ . +..+|+++++ ++ ++++
T Consensus 129 t~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~--~~~~~~~~~~G~~v~~~~~~~~--~~~~~~d~e~l~~~l~~~~~~~~ 204 (448)
T 3meb_A 129 TGSLHIGFEFLHLWMPKAEFYMPSTTWPNHY--GIYDKVFNKLKVPYKEYTYLRK--DGELEIDFSNTKKDIQSAPEKSI 204 (448)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEESSCCTHHH--HHHHHHHCTTTSCCEEECCBCT--TSCSSBCHHHHHHHHHHSCTTCE
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCHhHH--HHHHhhHHhCCCeEEEEecccc--ccCCCcCHHHHHHHHHhCCCCcE
Confidence 999987 45566789999998887776653 3455 677 8888877332 2 2357888886 43 4688
Q ss_pred EEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCc-CCCCccc-----ccc-----cc-EEEeCCCccccCCc-
Q 043610 211 YLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSN-FCSKPVD-----VTR-----FG-VIYAGAQKNVGPSG- 271 (430)
Q Consensus 211 lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s-~G~~~id-----l~~-----~d-~~~~s~~K~~gp~G- 271 (430)
++++++++||||..++ + |.++ +++|+++++|+++. ++..+.+ +.. .+ +++.|++|.+|++|
T Consensus 205 ~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~ 284 (448)
T 3meb_A 205 FLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGE 284 (448)
T ss_dssp EEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGG
T ss_pred EEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccc
Confidence 8999999999999999 4 5554 58899999999865 4433211 111 12 67899999999889
Q ss_pred -cEEE--EE--------c-H----HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH--H--hcCHHH
Q 043610 272 -VTIV--IV--------R-K----DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL--E--LGGLNE 331 (430)
Q Consensus 272 -~g~l--~v--------~-~----~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~--~--~~g~~~ 331 (430)
+|++ ++ . + ++++.+.. .. .....+++..++.++..+|+... + ...++.
T Consensus 285 RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~----------~~--~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~ 352 (448)
T 3meb_A 285 RIGCLHVVHAGVEGSVEKNKALSAAMVSGMTL----------QI--RKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKE 352 (448)
T ss_dssp CCEEEEEECCCCSSSHHHHHHHHHHHHHHHHH----------HH--HTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred cceeeeeeeccccccccCCHHHHHHHHHHHHH----------HH--hcccCCccHHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 7887 55 3 3 33322110 00 11224567777777777764311 0 013678
Q ss_pred HHHHHHHHHHHHHHHHHcc--CC------ceecCCCCCCCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCCCCCee
Q 043610 332 VEKMNRKKAELLYNVIDGS--NG------FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHRSVGGM 402 (430)
Q Consensus 332 v~~~~~~l~~~l~~~l~~~--~G------~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~~~g~i 402 (430)
++++++++++++++.|.+. .| +.... +. . +.+.+ .+ .+.+++..| .++||.+.+|. .
T Consensus 353 ~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~---~~-~-g~~~~--~~--~~~~~~~~ll~~~gV~v~~G~-----g 418 (448)
T 3meb_A 353 MSARIHRMRSLLHASLAKRKTPGPGSKGTWDHIL---TA-I-GMFTF--TG--LTPEHVDYLKEKWSIYLVKAG-----G 418 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHH---HC-C-SSEEE--CC--CCHHHHHHHHHHHCEEECSGG-----G
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCcCcccccceeC---CC-c-eEEEe--cC--CCHHHHHHHHHhCCEEEeCCC-----c
Confidence 8899999999999999873 12 22211 11 1 12222 22 234566665 67799998764 4
Q ss_pred EEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 403 RASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 403 Ris~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
|||+... ++++|++++++|++++++
T Consensus 419 Ris~a~~-~~~~i~~~~~~l~~~l~~ 443 (448)
T 3meb_A 419 RMSMCGL-TESNCDYVAEAIHDAVTK 443 (448)
T ss_dssp EEEGGGC-CTTTHHHHHHHHHHHHHH
T ss_pred EEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 9999754 456699999999998875
No 180
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.84 E-value=2.9e-19 Score=177.97 Aligned_cols=318 Identities=10% Similarity=-0.004 Sum_probs=199.4
Q ss_pred CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHH-HHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CC
Q 043610 79 ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDL-RALLNIPQEYSVLFLQGGATTQFAAVPLNL-CT 156 (430)
Q Consensus 79 ~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~l-a~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~ 156 (430)
.+.++.+++++.+.+.. |. ...+++ ..+++++.+ ++++|..+ +++++ +|+|+|++.++.++ ++
T Consensus 12 ~~~~~~i~~a~~~~~~~----~~----~~~~~~----~~~~l~~~~~a~~~g~~~--~~v~~-~sgt~al~~al~~l~~~ 76 (377)
T 3ju7_A 12 TVPVIEYLDELKEIDAS----HI----YTNYGP----INQRFEQTIMSGFFQNRG--AVTTV-ANATLGLMAAIQLKKRK 76 (377)
T ss_dssp CCCGGGGHHHHHHHHHH----TC----CSSSCH----HHHHHHHHHHHHTSTTCS--EEEEE-SCHHHHHHHHHHHHSCT
T ss_pred CCCcHHHHHHHHHHHHc----CC----cccCCH----HHHHHHHHHHHHHhCCCC--eEEEe-CCHHHHHHHHHHHcCCC
Confidence 45677888888887753 11 111122 355888999 99999432 56665 78999999999998 79
Q ss_pred CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c-CCC--ccEEEEeecCCCccccCC--CC
Q 043610 157 PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q-NPD--AKYLHICANETIHGVEFK--EY 228 (430)
Q Consensus 157 ~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i-~~~--~~lv~i~~~~t~tG~~~p--ei 228 (430)
|||+|++....+.+.. ..++..| +++.++...+ +..+|+++++ + +++ |++|+. .+++|...| +|
T Consensus 77 ~Gd~Vi~~~~~~~~~~--~~~~~~G~~~~~v~~~~~---~~~~d~~~l~~~i~~~~~~tk~v~~---~~~~G~~~~~~~i 148 (377)
T 3ju7_A 77 KGKYALMPSFTFPATP--LAAIWCGLEPYFIDISID---DWYMDKTVLWDKIEELKEEVAIVVP---YATFGSWMNLEEY 148 (377)
T ss_dssp TCCEEEEESSSCTHHH--HHHHHTTCEEEEECBCTT---TCSBCHHHHHHHHHHHGGGEEEECC---BCGGGBCCCCHHH
T ss_pred CcCEEEECCCCcHHHH--HHHHHcCCEEEEEecCCc---cCCcCHHHHHHHHhcCCCCceEEEE---ECCCCCccCHHHH
Confidence 9999998887776642 3456678 8878877431 2257888887 5 566 888874 457899998 78
Q ss_pred ccc-cCCCcEEEEeccCcCCCCc--ccc----ccccEEEeCCCccccCCccEEEEEc-HHHHhccCCCCCccc--cccch
Q 043610 229 PSA-KNSTGILVADMSSNFCSKP--VDV----TRFGVIYAGAQKNVGPSGVTIVIVR-KDLLGNAQDKTPLML--DYKIH 298 (430)
Q Consensus 229 ~~~-~~~g~~lvvD~a~s~G~~~--idl----~~~d~~~~s~~K~~gp~G~g~l~v~-~~~~~~~~~~~p~~~--~~~~~ 298 (430)
.++ + +|+++++|++|++|... ..+ .+++++.++.+|++++...|+++.+ +++.++++.....-. .+ ..
T Consensus 149 ~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~~-~~ 226 (377)
T 3ju7_A 149 EELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNEEDIQRIKRMGNFGFDTNR-EC 226 (377)
T ss_dssp HHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHTBTTBCTTS-CB
T ss_pred HHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcCCCCCcEEEEECCHHHHHHHHHHHhcCCCCCC-ce
Confidence 886 7 99999999999999752 112 2334566668999975224666664 455554322110000 00 00
Q ss_pred hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec-CCCCCCCccc-eEEEEcCCCc
Q 043610 299 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC-PVEKSVRSFM-NVPFTLEKSD 376 (430)
Q Consensus 299 ~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~-~~~~~~rs~~-iv~f~~~~~~ 376 (430)
...+..++..+..... ++..+. .++...++.+++++++.+.|.+..++.+. .......+.. .+++.+++..
T Consensus 227 ~~~g~~~~~~~~~aa~----~~~~l~---~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (377)
T 3ju7_A 227 TMMGFNCKMSEYAAAI----GIATMK---KWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEV 299 (377)
T ss_dssp CSSCCBCCCCHHHHHH----HHHHHH---THHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTS
T ss_pred eeccccCCCCHHHHHH----HHHHHH---HHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChh
Confidence 1112122233332211 222222 56788889999999999999874433221 1122222222 2456666421
Q ss_pred hhHHHHHHHHHcCCeecCCCC---------------C--------CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 377 LEAEFVKEAAKEKMVQLKGHR---------------S--------VGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 377 ~~~~~~~~L~~~Gi~~~~g~~---------------~--------~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
...++.+.|.++||.+..++. . ...||++++..+|++|++++++.|++++.+
T Consensus 300 ~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 300 RNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVS 374 (377)
T ss_dssp CHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC----
T ss_pred hHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 133799999999998644320 0 136999999999999999999999987653
No 181
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.84 E-value=1.6e-19 Score=180.26 Aligned_cols=321 Identities=12% Similarity=0.065 Sum_probs=198.9
Q ss_pred CCCceeecCC--CCC---CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610 68 EDRVFNFAAG--PAN---LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG 142 (430)
Q Consensus 68 ~~~~~l~~~g--p~~---~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g 142 (430)
.++.++|..+ ..+ .++.|++++.+.+.+... +.+ ... ....+++++.+++++|. + +++++ +|
T Consensus 35 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~-----~~~---~~~~~~l~~~la~~~~~--~-~v~~~-~g 101 (395)
T 3nx3_A 35 AKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLH-TSN-----LYY---NENIAAAAKNLAKASAL--E-RVFFT-NS 101 (395)
T ss_dssp CCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSC-CCT-----TSB---CHHHHHHHHHHHHHHTC--S-EEEEE-SS
T ss_pred CCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhccc-ccc-----ccC---CHHHHHHHHHHHHhcCC--C-eEEEe-CC
Confidence 3445556655 222 479999999998864211 111 111 23456888899999983 3 77775 78
Q ss_pred HHHHHHHHHhhcC-------CCCCcEEEEeCChhHHHHHHHHHHhC-CceE----EecCCCCcCCCCCCccccc--cCCC
Q 043610 143 ATTQFAAVPLNLC-------TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQV----IWSGKAEKYTKIPNFDALE--QNPD 208 (430)
Q Consensus 143 aT~a~~~~~~sl~-------~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~----v~~~~~~~~g~~~d~~~l~--i~~~ 208 (430)
++++++.++..+. .++|+|++....+.+... .+...+ ...+ .+...+...-...|+++|+ ++++
T Consensus 102 g~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 179 (395)
T 3nx3_A 102 GTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTL--GALSLTANEKYQKPFKPLISGVKFAKYNDISSVEKLVNEK 179 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSH--HHHTTCCCHHHHGGGCSCCSCEEEECTTCHHHHHTTCCTT
T ss_pred HHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCH--HHHhhcCCcccccccCCCCCCcEEeCCCCHHHHHHhccCC
Confidence 9999999877653 357888877766544321 111111 0000 0000000000013567776 6788
Q ss_pred ccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccccc----cEEEeCCCcccc-CCccE
Q 043610 209 AKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTRF----GVIYAGAQKNVG-PSGVT 273 (430)
Q Consensus 209 ~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~----d~~~~s~~K~~g-p~G~g 273 (430)
+++|++..+++++|.+.+ +|.++ +++|+++++|++|+ +|.. ....+.+ |++ +++|.+| ..++|
T Consensus 180 ~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~G~~~G 257 (395)
T 3nx3_A 180 TCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIM--TSAKALGCGLSVG 257 (395)
T ss_dssp EEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGTTTSCCE
T ss_pred eEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEE--EecccccCCCceE
Confidence 999999988999999866 34444 58999999999987 6532 1222222 444 4569995 34589
Q ss_pred EEEEcHHH-HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc--
Q 043610 274 IVIVRKDL-LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS-- 350 (430)
Q Consensus 274 ~l~v~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~-- 350 (430)
++++++++ ++.+.+.. . + ...+.|...+.++.++|+.+.++ ...++.+++.+++++.|.+.
T Consensus 258 ~~~~~~~~~~~~~~~~~---~--------~-~~~~~~~~~~~aa~aal~~~~~~----~~~~~~~~~~~~~~~~l~~~~~ 321 (395)
T 3nx3_A 258 AFVINQKVASNSLEAGD---H--------G-STYGGNPLVCAGVNAVFEIFKEE----KILENVNKLTPYLEQSLDELIN 321 (395)
T ss_dssp EEEECHHHHHHHSCTTC---C--------S-SCBSCCHHHHHHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEchhhhhhhcCCcc---c--------C-CCCCCCHHHHHHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 77653310 0 0 11245777888888889876532 34445555555555555431
Q ss_pred --CCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 351 --NGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 351 --~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
..+.... .....+.+.+++.....++.+.|.++||.+.++. .+.+||++...++++|+++++++|++++++
T Consensus 322 ~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 322 EFDFCKKRK-----GLGFMQGLSLDKSVKVAKVIQKCQENALLLISCG--ENDLRFLPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp HCTTEEEEE-----EETTEEEEEECTTSCHHHHHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred hCCCeEEEE-----eEEEEEEEEeCCcchHHHHHHHHHHCCCEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 2222111 1123566777652223378899999999987642 458999999999999999999999998864
No 182
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.84 E-value=1.2e-19 Score=188.92 Aligned_cols=340 Identities=12% Similarity=0.059 Sum_probs=204.4
Q ss_pred ceeecCCC-CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CC--CCcEEEEEeCcHHH
Q 043610 71 VFNFAAGP-ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IP--QEYSVLFLQGGATT 145 (430)
Q Consensus 71 ~~l~~~gp-~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~--~~~~vv~~~~gaT~ 145 (430)
+++++.|. ...++.+++++.+.+... +.. .... ...+..+.+.+.+++.++ .+ ++.+|+++ +|+|+
T Consensus 105 ~i~l~~g~~~~~~~~~v~a~~~~~~~~---~y~---~~~~--g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t-~G~t~ 175 (533)
T 3f6t_A 105 AVNYCHTELGLNRDKVVAEWVNGAVAN---NYP---VPDR--CLVNTEKIINYFLQELSYKDANLAEQTDLFPT-EGGTA 175 (533)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHTC---SCC---SSSS--CCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEE-EHHHH
T ss_pred heeccCCCCCcCCcHHHHHHHHHHHhC---CCC---CCcc--cHHHHHHHHHHHHHHhcCCCCCCCCcceEEEE-CCHHH
Confidence 45555433 334678888877776431 110 0111 112233344444544422 22 11267765 78999
Q ss_pred HHHHHHhh-----cCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeec
Q 043610 146 QFAAVPLN-----LCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICAN 217 (430)
Q Consensus 146 a~~~~~~s-----l~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~ 217 (430)
++..++.+ ++++||+|++..+.+.++. ..++..| +++.++...+.+.+..+|+++|+ +++++++|+++++
T Consensus 176 al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p 253 (533)
T 3f6t_A 176 AIVYAFHSLAENHLLKKGDKIAINEPIFTPYL--RIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNP 253 (533)
T ss_dssp HHHHHHHHHHHTTSSCTTCEEEEESSCCHHHH--TSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESS
T ss_pred HHHHHHHHhhhhhccCCcCEEEEcCCCcHHHH--HHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCC
Confidence 99999887 7799999998877766542 3344456 77777764311122346888887 7889999999999
Q ss_pred CCCccccCC--CC---ccc-c-CCCcEEEEeccCcCCCC-cccc----ccccEEEeCCCccccCCc--cEEEEEcHH---
Q 043610 218 ETIHGVEFK--EY---PSA-K-NSTGILVADMSSNFCSK-PVDV----TRFGVIYAGAQKNVGPSG--VTIVIVRKD--- 280 (430)
Q Consensus 218 ~t~tG~~~p--ei---~~~-~-~~g~~lvvD~a~s~G~~-~idl----~~~d~~~~s~~K~~gp~G--~g~l~v~~~--- 280 (430)
+||||.+++ ++ .++ + ++|+++++|++|+.... ...+ .+..+++.|++|.+|++| +|+++++++
T Consensus 254 ~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~ 333 (533)
T 3f6t_A 254 TNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGVIALNEKNVF 333 (533)
T ss_dssp CTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGGCEEEEEEESSCHH
T ss_pred CCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCcccceEEEEECcHHHH
Confidence 999999999 34 443 4 68999999999762221 1122 122489999999999889 899999876
Q ss_pred --HHhccCC--------------CCCcccccc----chhh--cCCCCCCccHHHHHHHHH-HHHHHH-------HhcCHH
Q 043610 281 --LLGNAQD--------------KTPLMLDYK----IHDE--NNSLYNTPPCYCIYMCGL-VFEYLL-------ELGGLN 330 (430)
Q Consensus 281 --~~~~~~~--------------~~p~~~~~~----~~~~--~~~~~~T~~~~~~~a~~~-al~~l~-------~~~g~~ 330 (430)
+++.+.+ ..|.-+.+- .... ......+++.+.+.++.. ++..+. ....++
T Consensus 334 ~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~ 413 (533)
T 3f6t_A 334 DDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYID 413 (533)
T ss_dssp HHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHH
T ss_pred HHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHH
Confidence 5443210 011000000 0000 111224556666665332 233332 012367
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC------C----------chhHHHHHHH-HHcCCeec
Q 043610 331 EVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK------S----------DLEAEFVKEA-AKEKMVQL 393 (430)
Q Consensus 331 ~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~------~----------~~~~~~~~~L-~~~Gi~~~ 393 (430)
.++++++++++.+++.|. .++.... + .+...+.+.++. . ..+.+++.+| +++||.+.
T Consensus 414 ~~~~~~~~r~~~l~~~L~--~~~~~~~--~--~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~ 487 (533)
T 3f6t_A 414 IARKLVSERYDQLHDAMQ--APKDETD--T--NTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLV 487 (533)
T ss_dssp HHHHHHHHHHHHHHHHHT--CCCCCST--T--BCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSC
T ss_pred HHHHHHHHHHHHHHHhcC--CCccccC--C--CceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEe
Confidence 788899999999999996 4554332 1 222223344431 0 0122566555 57799988
Q ss_pred CCCC---CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 394 KGHR---SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 394 ~g~~---~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
+|.. ..+++|||+.. .++++++++++.|++++++
T Consensus 488 pg~~f~~~~~~iRls~a~-~~~e~i~~~i~~L~~~l~~ 524 (533)
T 3f6t_A 488 DGVGFGAKPGELRVSQAN-LPTEDYALIGKQVLELLKE 524 (533)
T ss_dssp TTEEECSSTTEEEEESSS-SCHHHHHHHHHHHHHHHHH
T ss_pred CCcccCCCCCEEEEEEee-CCHHHHHHHHHHHHHHHHH
Confidence 7642 25689999864 5789999999999988764
No 183
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.84 E-value=2.8e-19 Score=178.71 Aligned_cols=274 Identities=11% Similarity=0.048 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCC
Q 043610 115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKA 191 (430)
Q Consensus 115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~ 191 (430)
...+++++.+++++|.+ +++++ +||++|+..++.+++++||+|++..+.|.+.. +...++..| +++.++.
T Consensus 59 ~~~~~l~~~la~~~g~~---~~i~~-~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~--- 131 (389)
T 3acz_A 59 PTVEQFEEMVCSIEGAA---GSAAF-GSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDT--- 131 (389)
T ss_dssp HHHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECT---
T ss_pred hHHHHHHHHHHHHhCCC---eEEEe-CCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC---
Confidence 34568899999999986 45565 57889999999998899999998877665532 222255667 6655543
Q ss_pred CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCC--CccccccccEEEeCCC
Q 043610 192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCS--KPVDVTRFGVIYAGAQ 264 (430)
Q Consensus 192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~--~~idl~~~d~~~~s~~ 264 (430)
.|+++++ +++++++|++++++|++|.+.| +|.++ +++|+++++|++++.+. .++++ ..|+++.|++
T Consensus 132 ------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~~-~~di~~~S~s 204 (389)
T 3acz_A 132 ------SDVEKVKAAWKPNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLKPLEL-GADIALHSVS 204 (389)
T ss_dssp ------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGT-TCSEEEEETT
T ss_pred ------CCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccCcccc-CCeEEEECCh
Confidence 3567776 7889999999999999999999 78886 68899999999998665 45553 3489999999
Q ss_pred cccc-CCc--cEEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043610 265 KNVG-PSG--VTIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKA 340 (430)
Q Consensus 265 K~~g-p~G--~g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~ 340 (430)
|++| |.+ .|++++++ ++++.+.+ +.. ...++.+....+++..+++ .++...++..+.+
T Consensus 205 K~~~~~~~~~~G~v~~~~~~~~~~l~~----~~~--------~~g~~~~~~~~~~~~~~l~------~l~~r~~~~~~~~ 266 (389)
T 3acz_A 205 KYINGHGDVIGGVSSAKTAEDIATIKF----YRK--------DAGSLMAPMDAFLCARGMK------TLPIRMQIHMENG 266 (389)
T ss_dssp TTTTCSSCCCCEEEEESSHHHHHHHHH----HHH--------HHCCCCCHHHHHHHHHHHT------THHHHHHHHHHHH
T ss_pred hhccCCCCceeEEEEECcHHHHHHHHH----HHH--------hcCCCCCHHHHHHHHcCcc------HHHHHHHHHHHHH
Confidence 9996 655 49999998 87765422 000 0112344444444444443 2344455556666
Q ss_pred HHHHHHHHccCCcee--cC-CC--CC--------CCccceEEEEcCCCchhHHHHHHHHHcCCeecC---C------C--
Q 043610 341 ELLYNVIDGSNGFYK--CP-VE--KS--------VRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK---G------H-- 396 (430)
Q Consensus 341 ~~l~~~l~~~~G~~~--~~-~~--~~--------~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~---g------~-- 396 (430)
..+.+.+++...+.- .+ .. +. .....+++|.+++ ..++.+.|.+.|+.... | .
T Consensus 267 ~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~---~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~ 343 (389)
T 3acz_A 267 LKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS---FEAAKKLMEHLKVCTLAVSLGCVDTLIEHP 343 (389)
T ss_dssp HHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS---HHHHHHHHTTCSSSEEBSCCCCSSCEEECT
T ss_pred HHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC---HHHHHHHHHhCCCcEECcCCCCcccEeeCC
Confidence 677777765322111 11 00 00 0123467888863 23456666677876533 2 0
Q ss_pred -----------------CCCCeeEEeecCCCCHHHHHHHHHHHH
Q 043610 397 -----------------RSVGGMRASIYNAMPLAGVEKLVAFMK 423 (430)
Q Consensus 397 -----------------~~~g~iRis~~~~~t~edv~~ll~~L~ 423 (430)
...+.||+|++..++++.++.+.++|+
T Consensus 344 ~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~~~~~li~~l~~al~ 387 (389)
T 3acz_A 344 ASMTHAAVPENIMRKQGITPELVRISVGIENVDDIIADLKQALE 387 (389)
T ss_dssp TTTTTSSSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHT
T ss_pred cccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHh
Confidence 013579999998766666777666654
No 184
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.84 E-value=1.8e-19 Score=183.05 Aligned_cols=317 Identities=12% Similarity=0.077 Sum_probs=205.0
Q ss_pred CCCCceeecCCC--CC---CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610 67 QEDRVFNFAAGP--AN---LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG 141 (430)
Q Consensus 67 ~~~~~~l~~~gp--~~---~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ 141 (430)
..+..++|..|. .+ .++.|++++.+.+.+... .... .. .+..+++++.|++++|. + +++++ +
T Consensus 74 ~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~-~~~~-----~~---~~~~~~l~~~la~~~g~--~-~v~~~-~ 140 (439)
T 2oat_A 74 EGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTL-TSRA-----FY---NNVLGEYEEYITKLFNY--H-KVLPM-N 140 (439)
T ss_dssp TCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSC-CCTT-----SE---ESSHHHHHHHHHHHHTC--S-EEEEE-S
T ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCc-ccCc-----cC---CHHHHHHHHHHHHhcCC--C-EEEEe-C
Confidence 344456666643 23 689999999998865321 1100 11 12345777888888874 3 67775 7
Q ss_pred cHHHHHHHHHhhcC---------CCC-CcEEEEeCChhHHHHHHHHHHhCC-----------ceEEecCCCCcCCCCCCc
Q 043610 142 GATTQFAAVPLNLC---------TPN-DPVDYIVTGSWGDKAFKEAQKFCN-----------PQVIWSGKAEKYTKIPNF 200 (430)
Q Consensus 142 gaT~a~~~~~~sl~---------~~g-d~vl~~~~g~~~~~~~~~a~~~g~-----------~~~v~~~~~~~~g~~~d~ 200 (430)
|+++|++.++..+. .+| |+|++.+.++.+... ......|. ..++... + .|+
T Consensus 141 sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~-~~~~~~g~~~~~~~~~p~~~~v~~~~----~---~d~ 212 (439)
T 2oat_A 141 TGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTL-SAISSSTDPTSYDGFGPFMPGFDIIP----Y---NDL 212 (439)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSH-HHHTTCCCHHHHTTSCSCCTTEEEEC----S---SCH
T ss_pred CHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCH-hHhhcCCChhcccCCCCCCCCeEEeC----C---CCH
Confidence 89999998887653 356 788887766544311 11111111 1112111 1 366
Q ss_pred cccc--c-CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCC--Ccc--cccc--ccEEEeCC
Q 043610 201 DALE--Q-NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCS--KPV--DVTR--FGVIYAGA 263 (430)
Q Consensus 201 ~~l~--i-~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~--~~i--dl~~--~d~~~~s~ 263 (430)
++++ + .+++++|++..+++++|.+.+ +|.++ +++|+++++|++|. +|. ..+ +... .|++ ++
T Consensus 213 ~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~--t~ 290 (439)
T 2oat_A 213 PALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV--LL 290 (439)
T ss_dssp HHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EE
T ss_pred HHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEE--Ee
Confidence 7776 6 467888888777788998763 45554 58999999999985 442 111 2222 2555 77
Q ss_pred CccccCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043610 264 QKNVGPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKA 340 (430)
Q Consensus 264 ~K~~gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~ 340 (430)
+|++|. | +|++++++++++.+.+. . .+.+ ++.|...+.++.++|+.+.+ +.+.++.++++
T Consensus 291 sK~l~~-G~~~~G~v~~~~~~~~~l~~~---~--------~~~t-~~~~~~~~aaa~aal~~~~~----~~~~~~~~~~~ 353 (439)
T 2oat_A 291 GKALSG-GLYPVSAVLCDDDIMLTIKPG---E--------HGST-YGGNPLGCRVAIAALEVLEE----ENLAENADKLG 353 (439)
T ss_dssp CGGGGT-TSSCCEEEEECHHHHTTSCTT---S--------SCCS-STTCHHHHHHHHHHHHHHHH----TTHHHHHHHHH
T ss_pred cccccC-CCCCeEEEEECHHHHhccCCC---C--------cccC-CCcCHHHHHHHHHHHHHHhh----hhHHHHHHHHH
Confidence 899974 5 89999999987764321 0 1112 24566777888889987764 25678889999
Q ss_pred HHHHHHHHccCCceecCCCCCCCccceEEEEcCCC--chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHH
Q 043610 341 ELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS--DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKL 418 (430)
Q Consensus 341 ~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~--~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~l 418 (430)
+++++.|++ .++.++. .....+ ..+.+.+++. ....++.+.|.++||.+.++. .+.+|+++...++++|++++
T Consensus 354 ~~l~~~L~~-l~~~~~~-~~~~~g-~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~~~--~~~iRi~~~~~~t~e~i~~~ 428 (439)
T 2oat_A 354 IILRNELMK-LPSDVVT-AVRGKG-LLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTH--GDIIRFAPPLVIKEDELRES 428 (439)
T ss_dssp HHHHHHHTT-SCTTTEE-EEEEET-TEEEEEECCCSSCCHHHHHHHHHHTTEECCBSS--SSEEEECCCTTCCHHHHHHH
T ss_pred HHHHHHHHH-hcCCCcE-EEEeee-eEEEEEEecCccHHHHHHHHHHHHCCeEEecCC--CCEEEEECccCCCHHHHHHH
Confidence 999999986 4543211 111122 3456777642 112379999999999987632 35799999888999999999
Q ss_pred HHHHHHHHHh
Q 043610 419 VAFMKDFQAK 428 (430)
Q Consensus 419 l~~L~~~~~~ 428 (430)
++.|++++++
T Consensus 429 l~~l~~~l~~ 438 (439)
T 2oat_A 429 IEIINKTILS 438 (439)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 185
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.83 E-value=5.5e-20 Score=187.66 Aligned_cols=289 Identities=11% Similarity=0.033 Sum_probs=186.3
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC----CCCc---EEEEeCChhHHHHHHHHHHhC-CceEEec
Q 043610 117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT----PNDP---VDYIVTGSWGDKAFKEAQKFC-NPQVIWS 188 (430)
Q Consensus 117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~----~gd~---vl~~~~g~~~~~~~~~a~~~g-~~~~v~~ 188 (430)
..++++.++++++.+ +++++ +|+|+|++.++..+.. +||+ |++. ..+|+. +....+..| +++.+..
T Consensus 78 ~~~l~~~la~~~~~~---~v~~t-~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~-~~~~~~-~~~~~~~~g~~~~~~~~ 151 (467)
T 1ax4_A 78 YYDLKDKAKELFNYD---YIIPA-HQGRGAENILFPVLLKYKQKEGKAKNPVFIS-NFHFDT-TAAHVELNGCKAINIVT 151 (467)
T ss_dssp HHHHHHHHHHHHCCC---EEEEE-SSHHHHHHHHHHHHHHHHHHTTCCSSCEEEE-SSCCHH-HHHHHHHTTCEEEECBC
T ss_pred HHHHHHHHHHHcCCC---cEEEc-CCcHHHHHHHHHHHHHhhccCCCccceEEEe-ccccch-hhHHHhccCCceecccc
Confidence 457789999999873 67775 7899999999998877 9998 8765 555543 222344456 5444432
Q ss_pred CC--C----CcCCCCCCccccc--cC----CCccEEEEeecCCCc-cccCC-----CCccc-cCCCcEEEEeccCcC---
Q 043610 189 GK--A----EKYTKIPNFDALE--QN----PDAKYLHICANETIH-GVEFK-----EYPSA-KNSTGILVADMSSNF--- 246 (430)
Q Consensus 189 ~~--~----~~~g~~~d~~~l~--i~----~~~~lv~i~~~~t~t-G~~~p-----ei~~~-~~~g~~lvvD~a~s~--- 246 (430)
.. + .++...+|+++|+ ++ +++++|++++++|++ |.+.+ +|.++ +++|+++++|+++.+
T Consensus 152 ~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~ 231 (467)
T 1ax4_A 152 EKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENA 231 (467)
T ss_dssp GGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHH
T ss_pred cccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcc
Confidence 11 0 0122246788887 54 379999999999999 88877 35554 689999999998765
Q ss_pred --------CCCcccc--------ccccEEEeCCCccccCC-ccEEEEEc-H-HHHhccCCCCCccccccchhhcCCCCCC
Q 043610 247 --------CSKPVDV--------TRFGVIYAGAQKNVGPS-GVTIVIVR-K-DLLGNAQDKTPLMLDYKIHDENNSLYNT 307 (430)
Q Consensus 247 --------G~~~idl--------~~~d~~~~s~~K~~gp~-G~g~l~v~-~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T 307 (430)
+...+++ ...|++++|+||++|++ | |+++.+ + ++++.+....+.+ .....+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~d~~~l~~~~~~~~~~~-------~~~~~~~~ 303 (467)
T 1ax4_A 232 YFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIG-GLVAIRDNEEIFTLARQRCVPM-------EGFVTYGG 303 (467)
T ss_dssp HHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSC-EEEEESSCHHHHHHHHHHHHHH-------TCSTTTTT
T ss_pred hhccccccccCCCchhhhhhhhccccceEEEeccccCCCCcc-eEEEeCCHHHHHHHHHhhcccc-------ccccccCC
Confidence 3333332 22478889999999854 6 777777 6 6766532110000 01122345
Q ss_pred ccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEE-------cCCCchhH-
Q 043610 308 PPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFT-------LEKSDLEA- 379 (430)
Q Consensus 308 ~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~-------~~~~~~~~- 379 (430)
.+...+.++..+++.+. . ++..++..++++++++.|.+ .|+.+.. + .++ ..+.+. +++.+.+.
T Consensus 304 ~~~~~~~a~~~~l~~~~---~-~~~~~~~~~~~~~l~~~L~~-~~~~~~~--~-~~~-~~~~~~~~~~~~~~~~~~~~~~ 374 (467)
T 1ax4_A 304 LAGRDMAAMVQGLEEGT---E-EEYLHYRIGQVKYLGDRLRE-AGIPIQY--P-TGG-HAVFVDCKKLVPQIPGDQFPAQ 374 (467)
T ss_dssp CCHHHHHHHHHHHHHTT---C-HHHHHHHHHHHHHHHHHHHH-TTCCBCS--S-CCS-SEEEEESTTTCTTSCGGGCHHH
T ss_pred ccchHHHHHHHHHHHhh---h-hhHHHHHHHHHHHHHHHHHh-CCCCccc--C-CCc-eEEEEehhhhccccccCCCCHH
Confidence 56655565555665432 1 22333444667888999986 6776542 1 233 234455 33212223
Q ss_pred HHHHHH-HHcCCeecC-CC---------C-----CCCeeEEeecCC-CCHHHHHHHHHHHHHHHHh
Q 043610 380 EFVKEA-AKEKMVQLK-GH---------R-----SVGGMRASIYNA-MPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 380 ~~~~~L-~~~Gi~~~~-g~---------~-----~~g~iRis~~~~-~t~edv~~ll~~L~~~~~~ 428 (430)
++.+.| .++||.+.+ |. . ..+.+|||+..+ +|++|++++++.|++++++
T Consensus 375 ~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 440 (467)
T 1ax4_A 375 AVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEK 440 (467)
T ss_dssp HHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 688888 888998765 31 1 125799999854 8999999999999987654
No 186
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.82 E-value=2e-18 Score=174.99 Aligned_cols=317 Identities=12% Similarity=0.079 Sum_probs=199.3
Q ss_pred CCCceeecCC----CCC-CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610 68 EDRVFNFAAG----PAN-LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG 142 (430)
Q Consensus 68 ~~~~~l~~~g----p~~-~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g 142 (430)
.+..++|..| +.. .++.|++++.+.+.+... . + .. .. .+...++++.|++++|. + +++++ +|
T Consensus 64 G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~-~-~---~~-~~---~~~~~~l~~~la~~~g~--~-~v~~~-~s 130 (433)
T 1z7d_A 64 DKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTI-C-S---RA-FF---SVPLGICERYLTNLLGY--D-KVLMM-NT 130 (433)
T ss_dssp CCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSC-C-C---TT-SE---EHHHHHHHHHHHHHHTC--S-EEEEE-SS
T ss_pred CCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCC-c-c---CC-cC---CHHHHHHHHHHHhhcCC--C-eEEEe-CC
Confidence 3445555553 323 789999999998865321 1 1 01 11 13455778889999984 3 77775 78
Q ss_pred HHHHHHHHHhhcC---------CCC-CcEEEEeCChhHHHHHHHHHHhCC-----------ceEEecCCCCcCCCCCCcc
Q 043610 143 ATTQFAAVPLNLC---------TPN-DPVDYIVTGSWGDKAFKEAQKFCN-----------PQVIWSGKAEKYTKIPNFD 201 (430)
Q Consensus 143 aT~a~~~~~~sl~---------~~g-d~vl~~~~g~~~~~~~~~a~~~g~-----------~~~v~~~~~~~~g~~~d~~ 201 (430)
+++|++.++..+. .+| |+|++.+..+.+... ......|. ..++.. ++ .|++
T Consensus 131 GseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~-~~~~~~g~~~~~~~~~p~~~~v~~~----~~---~d~~ 202 (433)
T 1z7d_A 131 GAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTL-GCISASTTKKCTSNFGPFAPQFSKV----PY---DDLE 202 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------------------CEEEE----CT---TCHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcch-hhhcccCCccccccCCCCCCCeEEe----CC---CCHH
Confidence 9999998877642 467 888877766544321 11111111 111111 01 3667
Q ss_pred ccc--c-CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccc--c--ccEEEeCCC
Q 043610 202 ALE--Q-NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVT--R--FGVIYAGAQ 264 (430)
Q Consensus 202 ~l~--i-~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~--~--~d~~~~s~~ 264 (430)
+++ + ++++++|++..+++++|++.+ +|.++ +++|+++++|++|+ +|.. .+.++ . .|++ +++
T Consensus 203 ~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~s 280 (433)
T 1z7d_A 203 ALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI--LLG 280 (433)
T ss_dssp HHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EEC
T ss_pred HHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEE--EEC
Confidence 776 6 578888888877788998763 45554 58999999999987 4321 11112 1 2555 677
Q ss_pred ccccCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610 265 KNVGPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE 341 (430)
Q Consensus 265 K~~gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~ 341 (430)
|++| .| +|++++++++++.+.+. . .+.+ ++.|...++++.++|+.+.+ +.+.++.+++++
T Consensus 281 K~l~-~G~~~~G~v~~~~~~~~~l~~~---~--------~~~t-~~~~~~~~aaa~aal~~~~~----~~~~~~~~~~~~ 343 (433)
T 1z7d_A 281 KALS-GGHYPISAVLANDDIMLVIKPG---E--------HGST-YGGNPLAASICVEALNVLIN----EKLCENAEKLGG 343 (433)
T ss_dssp GGGG-TTSSCCEEEEECHHHHTTCCTT---C--------CCCT-TTTCHHHHHHHHHHHHHHHH----TTHHHHHHHHHH
T ss_pred cccc-CCCCCeEEEEECHHHHhhhccc---c--------cccc-CCCCHHHHHHHHHHHHHHHh----ccHHHHHHHHHH
Confidence 9998 36 89999999987764321 0 1112 25567778888888987763 246778888888
Q ss_pred HHHHHHHcc-CCceecCCCCCCCccceEEEEcCCC-chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHH
Q 043610 342 LLYNVIDGS-NGFYKCPVEKSVRSFMNVPFTLEKS-DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLV 419 (430)
Q Consensus 342 ~l~~~l~~~-~G~~~~~~~~~~rs~~iv~f~~~~~-~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll 419 (430)
++++.|++. .++..+. .....+ ..+.+.+++. ....++.+.|.++||.+.++. .+.+|+++...++++|+++++
T Consensus 344 ~l~~~L~~l~~~~~~~~-~~~~~g-~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~iRi~~~~~~t~e~i~~~l 419 (433)
T 1z7d_A 344 PFLENLKRELKDSKIVR-DVRGKG-LLCAIEFKNELVNVLDICLKLKENGLITRDVH--DKTIRLTPPLCITKEQLDECT 419 (433)
T ss_dssp HHHHHHHHHHTTCTTEE-EEEEET-TEEEEEECTTTCCHHHHHHHHHHTTEECCEET--TTEEEECCCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeE-EEEeee-eEEEEEEccChhHHHHHHHHHHHCCeEEecCC--CCEEEEECCcCCCHHHHHHHH
Confidence 888888763 1332211 000122 3566777642 112379999999999987642 357999998889999999999
Q ss_pred HHHHHHHHh
Q 043610 420 AFMKDFQAK 428 (430)
Q Consensus 420 ~~L~~~~~~ 428 (430)
++|++++++
T Consensus 420 ~~l~~~l~~ 428 (433)
T 1z7d_A 420 EIIVKTVKF 428 (433)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998764
No 187
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.82 E-value=4e-19 Score=179.34 Aligned_cols=317 Identities=12% Similarity=0.072 Sum_probs=203.2
Q ss_pred CCCceeecCC----C-CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610 68 EDRVFNFAAG----P-ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG 142 (430)
Q Consensus 68 ~~~~~l~~~g----p-~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g 142 (430)
.+..++|+.| + +..++.|++++.+.+.++.. +.. ... .+..+++++.|++++|. + +++++ +|
T Consensus 56 g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~-~~~-----~~~---~~~~~~l~~~la~~~g~--~-~v~~~-~g 122 (420)
T 2pb2_A 56 GKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWH-TSN-----VFT---NEPALRLGRKLIDATFA--E-RVLFM-NS 122 (420)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCC-CCT-----TSC---CHHHHHHHHHHHHHSSC--S-EEEEE-SS
T ss_pred CCEEEEccccccccccCCCCHHHHHHHHHHHHhccc-ccC-----ccC---CHHHHHHHHHHHhhCCC--C-eEEEe-CC
Confidence 3445556554 2 23578999999998865321 111 011 23456888999999984 3 77775 78
Q ss_pred HHHHHHHHHhhcCC-------CCC-cEEEEeCChhHHHHHHHHHHhC-C-------c---eEEecCCCCcCCCCCCcccc
Q 043610 143 ATTQFAAVPLNLCT-------PND-PVDYIVTGSWGDKAFKEAQKFC-N-------P---QVIWSGKAEKYTKIPNFDAL 203 (430)
Q Consensus 143 aT~a~~~~~~sl~~-------~gd-~vl~~~~g~~~~~~~~~a~~~g-~-------~---~~v~~~~~~~~g~~~d~~~l 203 (430)
+++|++.++..+.. +|+ +|++....+.+... ......| . + .+.... ..|+++|
T Consensus 123 gteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~-~~~~~~g~~~~~~~~~p~~~~~~~~~-------~~d~~~l 194 (420)
T 2pb2_A 123 GTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSL-FTVSVGGQPKYSDGFGPKPADIIHVP-------FNDLHAV 194 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSH-HHHHHSSCHHHHTTSSSCCSCEEEEC-------TTCHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCH-HHHHhcCCccccccCCCCCCCeEEec-------CCCHHHH
Confidence 99999998887653 674 77777655544211 1111122 1 0 011110 1366777
Q ss_pred c--cCCCccEEEEeecCCCcccc-CC-----CCccc-cCCCcEEEEeccCc-CCC--Ccc--cccc--ccEEEeCCCccc
Q 043610 204 E--QNPDAKYLHICANETIHGVE-FK-----EYPSA-KNSTGILVADMSSN-FCS--KPV--DVTR--FGVIYAGAQKNV 267 (430)
Q Consensus 204 ~--i~~~~~lv~i~~~~t~tG~~-~p-----ei~~~-~~~g~~lvvD~a~s-~G~--~~i--dl~~--~d~~~~s~~K~~ 267 (430)
+ +++++++|+++++++++|++ .+ +|.++ +++|+++++|++|. +|. ..+ +... .|++ +++|++
T Consensus 195 e~~i~~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~dii--t~sK~l 272 (420)
T 2pb2_A 195 KAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL--TSAKAL 272 (420)
T ss_dssp HHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGG
T ss_pred HHHhccCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeE--Eecccc
Confidence 7 67889999999888888863 44 45554 58999999999986 432 122 2212 2666 467999
Q ss_pred cCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 043610 268 GPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYN 345 (430)
Q Consensus 268 gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~ 345 (430)
| .| +|++++++++++.+.+. . .+.. .+.|...++++.++|+.+.+ +.+.++.+++++++++
T Consensus 273 ~-~G~~iG~~~~~~~l~~~l~~~---~--------~~~t-~~~~~~~~aa~~a~L~~~~~----~~~~~~~~~~~~~l~~ 335 (420)
T 2pb2_A 273 G-GGFPVSAMLTTQEIASAFHVG---S--------HGST-YGGNPLACAVAGAAFDIINT----PEVLQGIHTKRQQFVQ 335 (420)
T ss_dssp G-TTSCCEEEEECHHHHTTCC---------------CCE-ECCCHHHHHHHHHHHHHHSS----HHHHHHHHHHHHHHHH
T ss_pred c-CCCceEEEEEhHHHHHhhcCC---C--------cCcc-cCcCHHHHHHHHHHHHHHHh----ccHHHHHHHHHHHHHH
Confidence 7 35 89999999877654320 0 0111 25577778888888887642 5778889999999999
Q ss_pred HHHccC-CceecCCCCCCCccceEEEEcCCCc--hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHH
Q 043610 346 VIDGSN-GFYKCPVEKSVRSFMNVPFTLEKSD--LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFM 422 (430)
Q Consensus 346 ~l~~~~-G~~~~~~~~~~rs~~iv~f~~~~~~--~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L 422 (430)
.|++.. ++..+. .....+ ..+.+.+++.. ...++.+.|.++||.+.++. .+.+||++...++++|++++++.|
T Consensus 336 ~L~~~~~~~~~~~-~~~~~g-~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~~~--~~~iRl~~~~~~t~eei~~~~~~l 411 (420)
T 2pb2_A 336 HLQAIDEQFDIFS-DIRGMG-LLIGAELKPKYKGRARDFLYAGAEAGVMVLNAG--ADVMRFAPSLVVEEADIHEGMQRF 411 (420)
T ss_dssp HHHHHHHHHCCEE-EEEEET-TEEEEEECGGGTTCHHHHHHHHHHTTEECEESS--TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred HHHHHHhcCCCeE-EEEecc-eEEEEEECCCchHHHHHHHHHHHHCCCEEEeCC--CCEEEEECCCCCCHHHHHHHHHHH
Confidence 987631 222211 000122 34566765311 13379999989999987653 357999998889999999999999
Q ss_pred HHHHHh
Q 043610 423 KDFQAK 428 (430)
Q Consensus 423 ~~~~~~ 428 (430)
++++++
T Consensus 412 ~~~l~~ 417 (420)
T 2pb2_A 412 AQAVGK 417 (420)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998764
No 188
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.82 E-value=2.4e-19 Score=182.28 Aligned_cols=320 Identities=10% Similarity=-0.022 Sum_probs=202.0
Q ss_pred CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC----
Q 043610 81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT---- 156 (430)
Q Consensus 81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~---- 156 (430)
.++.|++++.+.+.+.. .+.+ ..... +..+++++.|+++++...+ +|+++ +|+++|++.++..+..
T Consensus 67 ~~~~v~~a~~~~~~~~~---~~~~--~~~~~---~~~~~l~~~la~~~~~~~~-~v~~~-~ggsea~~~al~~~~~~~~~ 136 (449)
T 3a8u_X 67 TRKEIQEAVAKQLSTLD---YSPG--FQYGH---PLSFQLAEKITDLTPGNLN-HVFFT-DSGSECALTAVKMVRAYWRL 136 (449)
T ss_dssp SCHHHHHHHHHHTTTCS---CCCS--SSCCC---HHHHHHHHHHHTTSSTTEE-EEEEE-SSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCC---Cccc--cccCC---HHHHHHHHHHHHhCCCCCC-EEEEc-CcHHHHHHHHHHHHHHHHHh
Confidence 38999999999886432 1111 01111 2445788899999987654 66665 8899999998877642
Q ss_pred ----CCCcEEEEeCChhHHHHHHHHHHhC-------------CceEEecCCCCcCCC---CCC--------ccccc--cC
Q 043610 157 ----PNDPVDYIVTGSWGDKAFKEAQKFC-------------NPQVIWSGKAEKYTK---IPN--------FDALE--QN 206 (430)
Q Consensus 157 ----~gd~vl~~~~g~~~~~~~~~a~~~g-------------~~~~v~~~~~~~~g~---~~d--------~~~l~--i~ 206 (430)
+||+|++....+.+.... .....| .+..++... .+.. .+| +++|+ +.
T Consensus 137 ~g~~~~~~vi~~~~~yhg~~~~-~~~~~g~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~d~~~~~~~~~~~le~~l~ 213 (449)
T 3a8u_X 137 KGQATKTKMIGRARGYHGVNIA-GTSLGGVNGNRKLFGQPMQDVDHLPHTL--LASNAYSRGMPKEGGIALADELLKLIE 213 (449)
T ss_dssp TTCTTCCEEEEETTCCCCSSHH-HHHHCCCHHHHTTTCCCSCSEEEECCCC--CGGGTTCSSSCSSSHHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCcCCCChh-hhhccCChhhccccCCCCCCCeEecCCc--cccCccccCChHHHHHHHHHHHHHHHH
Confidence 678888877666543211 111111 234444321 1110 124 66665 43
Q ss_pred ----CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccC-cCCCC--cccccc----ccEEEeCCCcccc
Q 043610 207 ----PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSS-NFCSK--PVDVTR----FGVIYAGAQKNVG 268 (430)
Q Consensus 207 ----~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~-s~G~~--~idl~~----~d~~~~s~~K~~g 268 (430)
+++++|++..++++||++.| +|.++ +++|+++|+|++| ++|.. .+.++. .|++ +++|+++
T Consensus 214 ~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~--s~sK~l~ 291 (449)
T 3a8u_X 214 LHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM--CIAKQVT 291 (449)
T ss_dssp HHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG
T ss_pred hcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE--EEccccc
Confidence 46778887777788998765 34554 5899999999999 57732 222222 2555 6679997
Q ss_pred CCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 043610 269 PSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYN 345 (430)
Q Consensus 269 p~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~ 345 (430)
. | +|++++++++++.+...... ..... ...+.. .+.|...++++.++|+.+.+ +.+.++.+++++++++
T Consensus 292 ~-G~~~~G~~~~~~~~~~~l~~~~~~-~~~~~-~~~~~t-~~~~~~~~aa~~aal~~~~~----~~~~~~~~~~~~~l~~ 363 (449)
T 3a8u_X 292 N-GAIPMGAVIASTEIYQTFMNQPTP-EYAVE-FPHGYT-YSAHPVACAAGLAALCLLQK----ENLVQSVAEVAPHFEK 363 (449)
T ss_dssp T-TSSCCEEEEEEHHHHHHHHTCSSC-TTSCS-SCCCCT-TTTCHHHHHHHHHHHHHHHH----TTHHHHHHHHHHHHHH
T ss_pred C-CCCceEEEEECHHHHHHhhccCcc-ccccc-ccccCC-CcccHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHH
Confidence 5 6 89999999887765331100 00000 000111 34577788888889987764 2467888889999999
Q ss_pred HHHccCCceecCCCCCCCccceEEEEcCCCc--h--hH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHH
Q 043610 346 VIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD--L--EA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA 420 (430)
Q Consensus 346 ~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~--~--~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~ 420 (430)
.|.+..++..+. .....+ ..+.+.+++.. . +. ++.+.|.++||.+.++. +.+||++...++++|++++++
T Consensus 364 ~L~~l~~~~~~~-~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g---~~iRis~~~~~t~~~i~~~l~ 438 (449)
T 3a8u_X 364 ALHGIKGAKNVI-DIRNFG-LAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGG---DTLQFGPTFNSKPQDLDRLFD 438 (449)
T ss_dssp HHHTTTTSTTEE-EEEEET-TEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEET---TEEEECCCTTCCHHHHHHHHH
T ss_pred HHHHHhcCCCeE-EEeeeE-EEEEEEEecCcccccccHHHHHHHHHHCCcEEecCC---CEEEEECCCcCCHHHHHHHHH
Confidence 998622232211 101122 45667776421 1 22 68888988999987652 579999988899999999999
Q ss_pred HHHHHHHh
Q 043610 421 FMKDFQAK 428 (430)
Q Consensus 421 ~L~~~~~~ 428 (430)
+|++++++
T Consensus 439 ~l~~~l~~ 446 (449)
T 3a8u_X 439 AVGEVLNK 446 (449)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998764
No 189
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.81 E-value=5.6e-19 Score=178.12 Aligned_cols=276 Identities=11% Similarity=0.041 Sum_probs=180.9
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCC
Q 043610 116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAE 192 (430)
Q Consensus 116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~ 192 (430)
..+++++.+++++|.+ +++++ +||++|+..++.+++++||+|++..+.+.+.. +...+++.| +++.++.
T Consensus 82 ~~~~l~~~la~~~g~~---~~~~~-~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~---- 153 (414)
T 3ndn_A 82 TVSVFEERLRLIEGAP---AAFAT-ASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDG---- 153 (414)
T ss_dssp HHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT----
T ss_pred HHHHHHHHHHHHHCCC---cEEEE-CCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCC----
Confidence 4568889999999974 56665 78899999999999999999998777766543 112234567 6665543
Q ss_pred cCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCcc
Q 043610 193 KYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQKN 266 (430)
Q Consensus 193 ~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K~ 266 (430)
.|+++++ +++++++|++++++|++|.+.| +|.++ +++|+++++|++++.|.....+. ..|+++.|++|+
T Consensus 154 -----~d~~~l~~ai~~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~ 228 (414)
T 3ndn_A 154 -----DDLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKH 228 (414)
T ss_dssp -----TCHHHHHHHTSSCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCGGGTCSEEEEETTTT
T ss_pred -----CCHHHHHHhcCCCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCeEeccCCcc
Confidence 2567776 7889999999999999999999 78886 68999999999998664322222 237999999999
Q ss_pred ccCCc---cEEEEEcHHHHh-ccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610 267 VGPSG---VTIVIVRKDLLG-NAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL 342 (430)
Q Consensus 267 ~gp~G---~g~l~v~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~ 342 (430)
+|+.| .|+++.+++.+. .+.. .. . ...++.+....+.+...++ .++...++..+.+.+
T Consensus 229 l~~~G~~~~G~vv~~~~~~~~~l~~----~~------~--~~g~~~~~~~a~~~~~~l~------~l~~r~~~~~~~a~~ 290 (414)
T 3ndn_A 229 IDGQGRVLGGAILGDREYIDGPVQK----LM------R--HTGPAMSAFNAWVLLKGLE------TLAIRVQHSNASAQR 290 (414)
T ss_dssp TTCSSCCCCEEEEECHHHHTTHHHH----HH------H--HHCCCCCHHHHHHHHHHGG------GHHHHHHHHHHHHHH
T ss_pred ccCCCCceEEEEEECHHHHHHHHHH----HH------H--HcCCCCCHHHHHHHHHHHH------HHHHHHHHHHHHHHH
Confidence 98877 699999988765 2211 00 0 0112334433333333332 345666777788888
Q ss_pred HHHHHHccCCceec--CCCCCC----------C-ccceEEEEcCCC----chhH-HHHHHHHHcCCeecCCC--------
Q 043610 343 LYNVIDGSNGFYKC--PVEKSV----------R-SFMNVPFTLEKS----DLEA-EFVKEAAKEKMVQLKGH-------- 396 (430)
Q Consensus 343 l~~~l~~~~G~~~~--~~~~~~----------r-s~~iv~f~~~~~----~~~~-~~~~~L~~~Gi~~~~g~-------- 396 (430)
+.++|.+.+++..+ +.-+.. + ...++.|.+++. .... +|++.|+..++.+..|.
T Consensus 291 l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p 370 (414)
T 3ndn_A 291 IAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAKSLVTHP 370 (414)
T ss_dssp HHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSSEECSCCSCSSCEEECG
T ss_pred HHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccceEcCCCCCCCceeeCc
Confidence 99999875554322 211110 1 235688888752 1122 46666655443332221
Q ss_pred -----------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610 397 -----------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 397 -----------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~ 426 (430)
...+.||+|++. ||++.+++.|++.+
T Consensus 371 ~~~~~~~~~~~~~~~~g~~~~~iRlsvG~----e~~~dli~dl~~al 413 (414)
T 3ndn_A 371 ATTTHRAMGPEGRAAIGLGDGVVRISVGL----EDTDDLIADIDRAL 413 (414)
T ss_dssp GGTTTCTTHHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHH
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 123479999986 55666666665543
No 190
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.81 E-value=8.2e-19 Score=178.52 Aligned_cols=314 Identities=9% Similarity=0.021 Sum_probs=192.7
Q ss_pred CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC
Q 043610 77 GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT 156 (430)
Q Consensus 77 gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~ 156 (430)
++.++++.+++++... ...+ ..+ ....++|+.+++++|.+ +++++ +||++|++.++.++++
T Consensus 52 ~~~~~~~~~~~a~~~~--------~~~y---~~~----~~~~~l~~~la~~~~~~---~~~~~-~~gt~a~~~al~~l~~ 112 (456)
T 2ez2_A 52 GTNAMSDKQWAGMMMG--------DEAY---AGS----ENFYHLERTVQELFGFK---HIVPT-HQGRGAENLLSQLAIK 112 (456)
T ss_dssp SCCCCCHHHHHHHTTC--------CCCS---SSC----HHHHHHHHHHHHHHCCS---EEEEE-SSHHHHHHHHHHHHCC
T ss_pred CCccCCHHHHHHhhcc--------hhhc---ccC----hhHHHHHHHHHHHhCCC---cEEEe-CCcHHHHHHHHHHhCC
Confidence 4457788888887521 1111 111 23457889999999975 67765 7899999999999889
Q ss_pred CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCC---C---cCCCCCCccccc--cCCCc----cEEEEeecCC-Ccc
Q 043610 157 PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKA---E---KYTKIPNFDALE--QNPDA----KYLHICANET-IHG 222 (430)
Q Consensus 157 ~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~---~---~~g~~~d~~~l~--i~~~~----~lv~i~~~~t-~tG 222 (430)
+|| ++....+++.. ...++..| +++.++..+. . +++..+|+++|+ +++++ ++|++++++| +||
T Consensus 113 ~gd--i~~~~~~~~~~-~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG 189 (456)
T 2ez2_A 113 PGQ--YVAGNMYFTTT-RYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGG 189 (456)
T ss_dssp TTC--EEEESSCCHHH-HHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTS
T ss_pred CCC--Eeccccccchh-HHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCC
Confidence 999 55666664532 23455667 7766665421 0 012246788886 55444 8999998887 999
Q ss_pred ccCC-----CCccc-cCCCcEEEEeccCcCC---------C--Ccccc-------cc-ccEEEeCCCccccCCccEEEEE
Q 043610 223 VEFK-----EYPSA-KNSTGILVADMSSNFC---------S--KPVDV-------TR-FGVIYAGAQKNVGPSGVTIVIV 277 (430)
Q Consensus 223 ~~~p-----ei~~~-~~~g~~lvvD~a~s~G---------~--~~idl-------~~-~d~~~~s~~K~~gp~G~g~l~v 277 (430)
...+ +|.++ +++|+++++|++|++| . ....+ .. .|+++.|++|+++++..|+++.
T Consensus 190 ~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~~gG~~~~ 269 (456)
T 2ez2_A 190 QPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNIGGFLCM 269 (456)
T ss_dssp BCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCSSCEEEEE
T ss_pred ccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCCCCceeEEEE
Confidence 9988 35554 5899999999999874 1 11111 12 3777778999987333588888
Q ss_pred -cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec
Q 043610 278 -RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC 356 (430)
Q Consensus 278 -~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~ 356 (430)
++++++.+......+.+ ....++.+...+.++..++ +... . +...++..++.+++++.|.+ .|+.+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~a~~~--~~~~-~-~~~~~~~~~~~~~l~~~L~~-~g~~~~ 337 (456)
T 2ez2_A 270 NDDEMFSSAKELVVVYEG-------MPSYGGLAGRDMEAMAIGL--REAM-Q-YEYIEHRVKQVRYLGDKLKA-AGVPIV 337 (456)
T ss_dssp SCHHHHHHHHHHHHHHTC-------CTTTTTCCHHHHHHHHHHH--HHHT-C-HHHHHHHHHHHHHHHHHHHH-TTCCBC
T ss_pred CCHHHHHHHHHHHhhccC-------cccccCcchhHHHHHHHHH--HHHh-H-HHHHHHHHHHHHHHHHHHhc-CCCccc
Confidence 57776654221110000 0111222333333322222 2211 1 45667777888899999987 577654
Q ss_pred CCCCCCCccceEEEEcC---CCchhHHH-----HHHH-HHcCCeecC-CC--------------CCCCeeEEeecCC-CC
Q 043610 357 PVEKSVRSFMNVPFTLE---KSDLEAEF-----VKEA-AKEKMVQLK-GH--------------RSVGGMRASIYNA-MP 411 (430)
Q Consensus 357 ~~~~~~rs~~iv~f~~~---~~~~~~~~-----~~~L-~~~Gi~~~~-g~--------------~~~g~iRis~~~~-~t 411 (430)
. + ..+ ..+.+.+. +.....++ .+.| .++||.+.+ |. ...+.+|||+..+ ++
T Consensus 338 ~--p-~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t 413 (456)
T 2ez2_A 338 E--P-VGG-HAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYT 413 (456)
T ss_dssp S--S-CCS-SEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCC
T ss_pred c--C-CCc-eEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCC
Confidence 2 2 123 23444542 11011134 6666 677987532 21 0125799999976 89
Q ss_pred HHHHHHHHHHHHHHHHh
Q 043610 412 LAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 412 ~edv~~ll~~L~~~~~~ 428 (430)
++|+++++++|++++++
T Consensus 414 ~e~i~~~~~~l~~~l~~ 430 (456)
T 2ez2_A 414 YAHMDVVADGIIKLYQH 430 (456)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999998764
No 191
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.81 E-value=2e-18 Score=174.86 Aligned_cols=322 Identities=12% Similarity=0.048 Sum_probs=199.3
Q ss_pred CCCceeecCCCC-----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610 68 EDRVFNFAAGPA-----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG 142 (430)
Q Consensus 68 ~~~~~l~~~gp~-----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g 142 (430)
.++.++|..|.. ..++.|++++.+.+.+... .+ ..... .+..+++++.|+++++...+.+++++ +|
T Consensus 42 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~---~~~~~---~~~~~~l~~~la~~~~~~~~~~v~~~-~g 112 (439)
T 3dxv_A 42 GRELIDLSGAWGAASLGYGHPAIVAAVSAAAANPAG--AT---ILSAS---NAPAVTLAERLLASFPGEGTHKIWFG-HS 112 (439)
T ss_dssp SCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCSC--SC---SSSSE---EHHHHHHHHHHHHTTTCTTTEEEEEE-SS
T ss_pred CCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccC--cc---ccccC---CHHHHHHHHHHHHhCCCCCCCEEEEe-CC
Confidence 344556655442 1588999999998865311 11 11111 23456888999999975441267765 78
Q ss_pred HHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHHh-CC-c--------------eEEecCCCCcCCCCC----Cc
Q 043610 143 ATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKF-CN-P--------------QVIWSGKAEKYTKIP----NF 200 (430)
Q Consensus 143 aT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~~-g~-~--------------~~v~~~~~~~~g~~~----d~ 200 (430)
++++++.++..+ ..++++|++.+.++.+... .+... +. . ..++... ..... |+
T Consensus 113 gsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~ 187 (439)
T 3dxv_A 113 GSDANEAAYRAIVKATGRSGVIAFAGAYHGCTV--GSMAFSGHSVQADAAKADGLILLPYPDPYRP---YRNDPTGDAIL 187 (439)
T ss_dssp HHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSH--HHHCC-------------CEEEECCCCSSSC---BTTBTTSHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcH--HHHhhcCCCchhhccccCCCCCCcEEcCCCc---ccccccHHHHH
Confidence 999999988874 3456788877766544321 12222 11 1 1111110 00001 45
Q ss_pred cccc--c----CCCccEEEEeecCCCccccCC--C-C---ccc-cCCCcEEEEeccCc-CCCC----ccccccc--cEEE
Q 043610 201 DALE--Q----NPDAKYLHICANETIHGVEFK--E-Y---PSA-KNSTGILVADMSSN-FCSK----PVDVTRF--GVIY 260 (430)
Q Consensus 201 ~~l~--i----~~~~~lv~i~~~~t~tG~~~p--e-i---~~~-~~~g~~lvvD~a~s-~G~~----~idl~~~--d~~~ 260 (430)
++|+ + .+++++|++..+++++|.+.+ + + .++ +++|+++++|++|+ +|.. .++.... |++
T Consensus 188 ~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~- 266 (439)
T 3dxv_A 188 TLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDIL- 266 (439)
T ss_dssp HHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEE-
T ss_pred HHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEE-
Confidence 6666 5 567889999988999999887 3 3 443 58999999999986 4321 1222222 455
Q ss_pred eCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 043610 261 AGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRK 338 (430)
Q Consensus 261 ~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~ 338 (430)
+++|.+|+ | +|++++++++++.+.+.. .... . .+...+.++.++|+.+.+ +.+.++.++
T Consensus 267 -s~sK~~~~-G~riG~~~~~~~~~~~~~~~~-----------~~~t-~-~~~~~~~aa~aal~~~~~----~~~~~~~~~ 327 (439)
T 3dxv_A 267 -VLGKGLGG-GLPLSAVIAPAEILDCASAFA-----------MQTL-H-GNPISAAAGLAVLETIDR----DDLPAMAER 327 (439)
T ss_dssp -EECGGGGT-TSCCEEEEEEHHHHTSCSSSS-----------CCTT-T-TCHHHHHHHHHHHHHHHH----TTHHHHHHH
T ss_pred -EEcchhcC-CcceEEEEECHHHHhhhcCCC-----------cCCC-c-ccHHHHHHHHHHHHHHHh----cCHHHHHHH
Confidence 77899974 5 799999999987654310 0112 2 566778888888887654 345566666
Q ss_pred HHHHHHHHHHcc----CCceecCCCCCCCccceEEEEc--------CCCchhHHHHHHHHHcCCeecCCCCCCCeeEEee
Q 043610 339 KAELLYNVIDGS----NGFYKCPVEKSVRSFMNVPFTL--------EKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASI 406 (430)
Q Consensus 339 l~~~l~~~l~~~----~G~~~~~~~~~~rs~~iv~f~~--------~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~ 406 (430)
+++++++.|.+. ..+.... ..+ ..+.+.+ ++.....++.+.|.++||.+.++....+.+||++
T Consensus 328 ~~~~~~~~l~~~~~~~~~~~~~~----~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~ 402 (439)
T 3dxv_A 328 KGRLLRDGLSELAKRHPLIGDIR----GRG-LACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGMNGNVLEFTP 402 (439)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEE----EET-TEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEESTTSCEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCeEEEE----EEE-EEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCCCCCEEEEEC
Confidence 666666666542 1122111 112 2344544 2211122688888888999877543346899999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHh
Q 043610 407 YNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 407 ~~~~t~edv~~ll~~L~~~~~~ 428 (430)
....+++|++++++.|++++++
T Consensus 403 ~~~~t~e~i~~~l~~l~~~l~~ 424 (439)
T 3dxv_A 403 PLTITETDIHKALDLLDRAFSE 424 (439)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHHHH
Confidence 9889999999999999998764
No 192
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.80 E-value=4.6e-18 Score=171.76 Aligned_cols=313 Identities=9% Similarity=0.033 Sum_probs=180.9
Q ss_pred cHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC------
Q 043610 82 PEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC------ 155 (430)
Q Consensus 82 ~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~------ 155 (430)
++.|++++.+.+.+... .. ...+.. +..+++++.|+++++.+.+ +|+++ +|++++++.++..+.
T Consensus 47 ~p~v~~a~~~~~~~~~~-~~----~~~~~~---~~~~~l~~~la~~~~~~~~-~v~~~-~gg~ea~~~al~~~~~~~~~~ 116 (430)
T 3i4j_A 47 RAEVGERMAAQAARLPF-VH----GSQFSS---DVLEEYAGRLARFVGLPTF-RFWAV-SGGSEATESAVKLARQYHVER 116 (430)
T ss_dssp CHHHHHHHHHHHHHCCC-CC----TTTCEE---HHHHHHHHHHHHHTTCTTC-EEEEE-SSHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhccc-cc----ccccCC---HHHHHHHHHHHHhCCCCCC-EEEEe-CcHHHHHHHHHHHHHHHHHhc
Confidence 89999999998865311 11 111112 3445778889999998765 77775 789999999888764
Q ss_pred --CCCCcEEEEeCChhHHHHHHHHHHhC-C---------------ceEEecCCCCcCC-CCCCccccc--cC----CCcc
Q 043610 156 --TPNDPVDYIVTGSWGDKAFKEAQKFC-N---------------PQVIWSGKAEKYT-KIPNFDALE--QN----PDAK 210 (430)
Q Consensus 156 --~~gd~vl~~~~g~~~~~~~~~a~~~g-~---------------~~~v~~~~~~~~g-~~~d~~~l~--i~----~~~~ 210 (430)
.++++|++.+..+.+... .+...+ . +..++... .+. ...|+++|+ +. ++++
T Consensus 117 g~~~~~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~le~~l~~~~~~~~~ 192 (430)
T 3i4j_A 117 GEPGRFKVITRVPSYHGASL--GSLAASGMGARRELYTPLMRPEAWPKLPKPD--PARNGAEDAEGLRALLEREGPETVA 192 (430)
T ss_dssp TCTTCCEEEEETTC---------------------------CGGGSCEECCCC--TTSCHHHHHTHHHHHHHHHCGGGEE
T ss_pred CCCCCcEEEEEeCCcCCCCc--ccccccCccccccccCCcCCCCCceEcCCCc--ccchhhHHHHHHHHHHHhcCCCCEE
Confidence 346788877766555321 111111 1 11111100 000 011335565 43 4566
Q ss_pred EEEEeecCC-CccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccccc-----cEEEeCCCccccCCc---
Q 043610 211 YLHICANET-IHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTRF-----GVIYAGAQKNVGPSG--- 271 (430)
Q Consensus 211 lv~i~~~~t-~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~-----d~~~~s~~K~~gp~G--- 271 (430)
+|++..+++ ++|.+.+ +|.++ +++|+++|+|++|+ +|.. ...+..+ |+++ ++|.+|. |
T Consensus 193 ~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t--~sK~l~~-G~~r 269 (430)
T 3i4j_A 193 AFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAV--LGKGLAA-GYAP 269 (430)
T ss_dssp EEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEE--ECGGGTT-TSSC
T ss_pred EEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEE--EcccccC-Cccc
Confidence 666666677 8888766 24444 58999999999987 5432 1222222 4554 5699975 6
Q ss_pred cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--
Q 043610 272 VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-- 349 (430)
Q Consensus 272 ~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-- 349 (430)
+|++++++++++.+.+....+. .+ ...+.|..++.++.++|+.+.+. ...++.+++.+++++.|.+
T Consensus 270 ~G~~~~~~~i~~~~~~~~~~~~-------~~-~t~~~~~~~~aaa~aal~~~~~~----~~~~~~~~~~~~~~~~l~~~~ 337 (430)
T 3i4j_A 270 LAGLLAAPQVYETVMGGSGAFM-------HG-FTYAGHPVSVAAGLSVLDIVERE----DLTGAAKERGAQLLAGLQALQ 337 (430)
T ss_dssp CEEEEECHHHHHHHHHTTCBCC-------CC-CTTTTCHHHHHHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEECHHHHHHHhccCCccc-------cc-CCCCCCHHHHHHHHHHHHHHHcc----cHHHHHHHHHHHHHHHHHHHH
Confidence 7999999998876432110000 01 11356778888888899877542 3344444444444444443
Q ss_pred --cCCceecCCCCCCCccceEEEEcCCC---------chhHHHHHHHHHcCCeecCCC-----CCCCeeEEeecCCCCHH
Q 043610 350 --SNGFYKCPVEKSVRSFMNVPFTLEKS---------DLEAEFVKEAAKEKMVQLKGH-----RSVGGMRASIYNAMPLA 413 (430)
Q Consensus 350 --~~G~~~~~~~~~~rs~~iv~f~~~~~---------~~~~~~~~~L~~~Gi~~~~g~-----~~~g~iRis~~~~~t~e 413 (430)
..++.... + .. ..+.+.+.+. ....++.+.|.++||.+.++. ...+.+||++....+++
T Consensus 338 ~~~~~~~~~~--~--~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e 412 (430)
T 3i4j_A 338 ARFPQMMQVR--G--TG-LLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAA 412 (430)
T ss_dssp HHCTTEEEEE--E--ET-TEEEEEEC------------CHHHHHHHHHHTTEECC-----------CEEEECCCTTCCHH
T ss_pred HhCCCeEEEE--E--EE-EEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHH
Confidence 22333221 1 12 2344555321 011368888999999987651 11347999999888999
Q ss_pred HHHHHHHHHHHHHHh
Q 043610 414 GVEKLVAFMKDFQAK 428 (430)
Q Consensus 414 dv~~ll~~L~~~~~~ 428 (430)
++++++++|++++++
T Consensus 413 ~i~~~l~~l~~~l~~ 427 (430)
T 3i4j_A 413 EVDGLLALLAGALED 427 (430)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998875
No 193
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.80 E-value=2e-19 Score=176.92 Aligned_cols=313 Identities=14% Similarity=0.072 Sum_probs=195.5
Q ss_pred ceeecCCCCCC--cHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610 71 VFNFAAGPANL--PEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA 148 (430)
Q Consensus 71 ~~l~~~gp~~~--~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~ 148 (430)
..+.++|+.++ ++.|++++.+.+.. ..+++ ....+++++.+++++|.+. . +++ +|+++++.
T Consensus 15 ~~~~~~~~~~~g~~p~v~~ai~~~~~~-----------~~~~~--~~~~~~l~~~la~~~~~~~--~-i~~-~~g~~a~~ 77 (359)
T 3pj0_A 15 YKLGGNGPRNVGVLTEALQNIDDNLES-----------DIYGN--GAVIEDFETKIAKILGKQS--A-VFF-PSGTMAQQ 77 (359)
T ss_dssp EESSSSSCCBHHHHHHHTTTSCTTCBC-----------CBTTB--SHHHHHHHHHHHHHHTCSE--E-EEE-SCHHHHHH
T ss_pred hhhcCCCccccCCCHHHHHHHHhhccc-----------CcccC--CHHHHHHHHHHHHHhCCCc--E-EEe-CCHHHHHH
Confidence 34556666555 78888887764321 11111 1345688899999999864 3 555 67899999
Q ss_pred HHHhhcCCCCCc-EEEEeCC-hhHHH-HHHHHHHhC-CceEEecCCCCcCCCCCCccccc-cCCCccEEEEeecCCCc-c
Q 043610 149 AVPLNLCTPNDP-VDYIVTG-SWGDK-AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-QNPDAKYLHICANETIH-G 222 (430)
Q Consensus 149 ~~~~sl~~~gd~-vl~~~~g-~~~~~-~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-i~~~~~lv~i~~~~t~t-G 222 (430)
.++..+..+||+ ++++... ++... ....+...| +++.++.. .+ .+|+++++ ..+++++|++++++|++ |
T Consensus 78 ~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----~~-~~d~~~l~~~~~~~~~v~~~~p~n~~~G 152 (359)
T 3pj0_A 78 IALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGTA----NQ-LLTIDDIKSLREPVSSVLIELPQREIGG 152 (359)
T ss_dssp HHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSCT----TS-CCCHHHHHTCSSCCSEEEEESSBGGGTS
T ss_pred HHHHHHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCCc----CC-CcCHHHHHhccCCceEEEEEecccCCCc
Confidence 998888778887 4444433 22221 111123346 65555541 22 47888887 66789999999998887 7
Q ss_pred ccCC--CC---ccc-cCCCcEEEEeccCcCCCC------cccc-ccccEEEeCCCcccc-CCccEEEEEcHHHHhccCCC
Q 043610 223 VEFK--EY---PSA-KNSTGILVADMSSNFCSK------PVDV-TRFGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDK 288 (430)
Q Consensus 223 ~~~p--ei---~~~-~~~g~~lvvD~a~s~G~~------~idl-~~~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~ 288 (430)
.+.| ++ .++ +++|+++++|+++.++.. +.++ ...|+++.|+||+++ |.| |+++.++++++.+...
T Consensus 153 ~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g-g~~~~~~~l~~~~~~~ 231 (359)
T 3pj0_A 153 QLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIAG-AILAGNDDFVQEAKIW 231 (359)
T ss_dssp BCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSSC-EEEEECHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcce-EEEECCHHHHHHHHHH
Confidence 8888 45 554 589999999998875542 1122 234788889999995 766 8889999988764320
Q ss_pred CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceE
Q 043610 289 TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV 368 (430)
Q Consensus 289 ~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv 368 (430)
.. ..+....+.+..... ...+++.. . +..++..+++++++++|.+..|+++.+ .+ ..++ .+
T Consensus 232 ~~---------~~~~~~~~~~~~~~a-~~~~l~~~-----~-~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~-~~~~-~~ 292 (359)
T 3pj0_A 232 KR---------RYGGDLISLYPYILS-ADYYFEKR-----I-GKMAEYFEAAKGLAERFNSCSGVKTVP-EV-PVSN-MF 292 (359)
T ss_dssp HH---------HTTCCCSCCHHHHHH-HHHHHHHH-----G-GGHHHHHHHHHHHHHHHHTSTTEEEES-SS-CSSS-EE
T ss_pred HH---------HhCCCcchhHHHHHH-HHHHHHHH-----H-HHhHHHHHHHHHHHHHHhhCCCceeec-cC-Ccce-EE
Confidence 00 000011122222222 22344432 1 233456778889999999756887742 11 1232 34
Q ss_pred EEEcCCCc-hhH-HHHHHHHHcCCeecCCCCC----CCeeEEeecC---CCCHHHHHHHHHHHHHH
Q 043610 369 PFTLEKSD-LEA-EFVKEAAKEKMVQLKGHRS----VGGMRASIYN---AMPLAGVEKLVAFMKDF 425 (430)
Q Consensus 369 ~f~~~~~~-~~~-~~~~~L~~~Gi~~~~g~~~----~g~iRis~~~---~~t~edv~~ll~~L~~~ 425 (430)
.+.++... .+. ++.+.|.++||.+.+|... .+++|+++.. ..+.+++++.++.|++.
T Consensus 293 ~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 293 HVYFENSADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred EEEecCccchhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 55665322 223 6888899999998887421 2469998864 24688888888888764
No 194
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.80 E-value=2.5e-18 Score=174.08 Aligned_cols=323 Identities=14% Similarity=0.038 Sum_probs=203.4
Q ss_pred CCCceeecCCCC--CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC------CCCCcEEEEE
Q 043610 68 EDRVFNFAAGPA--NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN------IPQEYSVLFL 139 (430)
Q Consensus 68 ~~~~~l~~~gp~--~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g------~~~~~~vv~~ 139 (430)
.+.+++++.|-. +.|+.+++++.+.+........ .|.....+ ..+..++|+.++++++ ++++ +|+++
T Consensus 55 ~~~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~-~Y~~~~~G---~~~~~~lr~aia~~~~~~~~~~~~~~-~iv~t 129 (427)
T 2hox_A 55 QGCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRM-SYFFNPVS---NFISFELEKTIKELHEVVGNAAAKDR-YIVFG 129 (427)
T ss_dssp TTCCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTC-SSSCSSCC---TTCCHHHHHHHHHHHHHHTCBCCTTC-EEEEE
T ss_pred CCceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccc-cCCCCCCC---ccchHHHHHHHHHHHHHhCCcCCCCC-EEEEe
Confidence 344666666643 3345677777766521100010 01111101 0112355666666665 4554 77765
Q ss_pred eCcHHHHHHHHHhhc--------CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCC
Q 043610 140 QGGATTQFAAVPLNL--------CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPD 208 (430)
Q Consensus 140 ~~gaT~a~~~~~~sl--------~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~ 208 (430)
+|+++++..++..+ ++|||+|++..+.+.++ ...++..| +++. + .+|+++|+ ++++
T Consensus 130 -~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~--~~~~~~~g~~~~~--------~--~~d~~~l~~~~~~~ 196 (427)
T 2hox_A 130 -VGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVF--REQTKYFDKKGYV--------W--AGNAANYVNVSNPE 196 (427)
T ss_dssp -SHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHH--HHHHHHSCBTTEE--------E--EEEGGGGTTCSCGG
T ss_pred -CCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccH--HHHHHHcCCeeee--------e--cCCHHHHHHhhcCC
Confidence 89999999999999 89999998877666543 23455667 6542 2 24666776 5678
Q ss_pred ccEEEEeecCCCccccCCCCccccCCCcEEEEeccCcCCCCc-ccc-ccccEEEeCCCccccCCc--cEEEEE-cHHHHh
Q 043610 209 AKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKP-VDV-TRFGVIYAGAQKNVGPSG--VTIVIV-RKDLLG 283 (430)
Q Consensus 209 ~~lv~i~~~~t~tG~~~pei~~~~~~g~~lvvD~a~s~G~~~-idl-~~~d~~~~s~~K~~gp~G--~g~l~v-~~~~~~ 283 (430)
+++|++++++||||.++++ .++ ++..+.|..+.-...+ .++ .+.++++.|++|.+|++| +|++++ ++++++
T Consensus 197 ~k~v~l~~p~NPtG~~~~~--~l~--~~~~i~d~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~ 272 (427)
T 2hox_A 197 QYIEMVTSPNNPEGLLRHA--VIK--GCKSIYDMVYYWPHYTPIKYKADEDILLFTMSKFTGHSGSRFGWALIKDESVYN 272 (427)
T ss_dssp GEEEEEESSCTTTCCCCCC--SST--TCEEEEECTTCSTTTSCCCSCBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHH
T ss_pred ceEEEEcCCCCCcccccHH--HHc--CCCEEEeecccCCCCCccccCCCceEEEEeChhcCCCCCceEEEEEECCHHHHH
Confidence 9999999999999999992 223 4567888765311111 122 234699999999999889 899999 488877
Q ss_pred ccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHH---------hcCHHHHHHHHHHHHHHHHHHHHccCCce
Q 043610 284 NAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLE---------LGGLNEVEKMNRKKAELLYNVIDGSNGFY 354 (430)
Q Consensus 284 ~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~---------~~g~~~v~~~~~~l~~~l~~~l~~~~G~~ 354 (430)
.+.... .. ...+++...+.++..+|+...+ +.-++..+++++++++++.+.|++..|+.
T Consensus 273 ~l~~~~----~~--------~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 340 (427)
T 2hox_A 273 NLLNYM----TK--------NTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFS 340 (427)
T ss_dssp HHHHHH----HH--------HTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEE
T ss_pred HHHHHH----Hh--------cCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCcc
Confidence 643210 00 1124566667766667764211 11245677888999999999998755776
Q ss_pred ecCCC-CC---------CCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCC---CCCeeEEeecCCCCHHHHHHHHH
Q 043610 355 KCPVE-KS---------VRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHR---SVGGMRASIYNAMPLAGVEKLVA 420 (430)
Q Consensus 355 ~~~~~-~~---------~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~---~~g~iRis~~~~~t~edv~~ll~ 420 (430)
+.... +. ..+...+.+.+++ ...++.+.| .++||.+.+|.. ..++||||+.. ++++++++++
T Consensus 341 ~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~--~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~--~~e~l~~~l~ 416 (427)
T 2hox_A 341 YQELPQSEYCNYFRRMRPPSPSYAWVKCEW--EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK--TQDDFDQLMY 416 (427)
T ss_dssp CCCCCSCEEETTTTEEECCCCSEEEEEECS--GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS--CHHHHHHHHH
T ss_pred ccccccccccccccccCCCCceEEEEECCC--cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecC--CHHHHHHHHH
Confidence 51000 10 0122334456653 123577775 578999887642 24689999985 8999999999
Q ss_pred HHHHHHHh
Q 043610 421 FMKDFQAK 428 (430)
Q Consensus 421 ~L~~~~~~ 428 (430)
.|++++++
T Consensus 417 ~l~~~~~~ 424 (427)
T 2hox_A 417 YLKDMVKA 424 (427)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhh
Confidence 99998764
No 195
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.80 E-value=5.4e-18 Score=176.75 Aligned_cols=284 Identities=12% Similarity=0.086 Sum_probs=175.7
Q ss_pred EEEEEeCcHHHHHHHHHhh-----cCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC
Q 043610 135 SVLFLQGGATTQFAAVPLN-----LCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN 206 (430)
Q Consensus 135 ~vv~~~~gaT~a~~~~~~s-----l~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~ 206 (430)
+|+++ +|+++++..++.. +++|||+|++..+.+.++...-.....| +++.++..++ .+..+|+++++ ++
T Consensus 167 ~I~~t-~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~~~ 243 (546)
T 2zy4_A 167 NLFAV-EGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPS--LNWQYPDSELDKLKD 243 (546)
T ss_dssp EEEEE-EHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGG--GTTBCCHHHHGGGGS
T ss_pred eEEEE-CCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcc--cCCCCCHHHHHHhhC
Confidence 77664 7899999998877 5689999999888877653211112235 5666665432 22347888887 57
Q ss_pred CCccEEEEeecCCCccccCC--C---Cccc---cCCCcEEEEeccCcCCCC-ccccc----cccEEEeCCCccccCCc--
Q 043610 207 PDAKYLHICANETIHGVEFK--E---YPSA---KNSTGILVADMSSNFCSK-PVDVT----RFGVIYAGAQKNVGPSG-- 271 (430)
Q Consensus 207 ~~~~lv~i~~~~t~tG~~~p--e---i~~~---~~~g~~lvvD~a~s~G~~-~idl~----~~d~~~~s~~K~~gp~G-- 271 (430)
+++++|++++++||||.+++ + |.++ +++|+++++|++++.... +..+. +..+++.|++|.+|++|
T Consensus 244 ~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~GlR 323 (546)
T 2zy4_A 244 PAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFGATGWR 323 (546)
T ss_dssp TTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCGGGC
T ss_pred CCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccCCCCcc
Confidence 88999999999999999999 3 4443 478999999999873322 22221 22478999999999889
Q ss_pred cEEEEEcHH-HHhccCCCC------------------Cccccccc----hhhcC--CCCCCccHHHHHHHHH-HH-HHHH
Q 043610 272 VTIVIVRKD-LLGNAQDKT------------------PLMLDYKI----HDENN--SLYNTPPCYCIYMCGL-VF-EYLL 324 (430)
Q Consensus 272 ~g~l~v~~~-~~~~~~~~~------------------p~~~~~~~----~~~~~--~~~~T~~~~~~~a~~~-al-~~l~ 324 (430)
+|+++++++ +++.+.... |+.+.+.. ..... ....+.+.+.+.++.. ++ .++.
T Consensus 324 iG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~ 403 (546)
T 2zy4_A 324 LGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMD 403 (546)
T ss_dssp EEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHC
T ss_pred eEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHh
Confidence 799999875 655431111 11111000 00000 0112455555554321 11 2221
Q ss_pred H-hcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC------C----------chhHH-HHHHHH
Q 043610 325 E-LGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK------S----------DLEAE-FVKEAA 386 (430)
Q Consensus 325 ~-~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~------~----------~~~~~-~~~~L~ 386 (430)
+ ....+.+++.+++.++.+.+.|. .++.. .++ .....+.+.+++ . ..+.+ +.+.|.
T Consensus 404 ~~~~~~~~~r~~~~~r~~~l~~~L~--~~~~~---~~~-~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~ 477 (546)
T 2zy4_A 404 EADEYKHTLKQLIRRRETTLYRELG--MPPLR---DEN-AVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIAD 477 (546)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHGGGT--SSCCC---CTT-BCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcC--CCccc---CCC-CeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHH
Confidence 1 11246677777777777777774 23322 121 233334455531 0 00223 555677
Q ss_pred HcCCeecCCCCC---CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 387 KEKMVQLKGHRS---VGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 387 ~~Gi~~~~g~~~---~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
++||.+.+|... .+++|||+. ..++++++++++.|++++++
T Consensus 478 ~~gV~v~pG~~F~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~ 521 (546)
T 2zy4_A 478 ETGIVLLPGRGFGSNRPSGRASLA-NLNEYEYAAIGRALRKMADE 521 (546)
T ss_dssp HHSCCCEESSCTTCSSCEEEEESS-SSCHHHHHHHHHHHHHHHHH
T ss_pred HCCEEEeCccccCCCCCeEEEEec-cCCHHHHHHHHHHHHHHHHH
Confidence 889999887532 457999997 45789999999999988754
No 196
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.80 E-value=2.3e-19 Score=181.44 Aligned_cols=316 Identities=8% Similarity=-0.023 Sum_probs=194.5
Q ss_pred CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC--CCC
Q 043610 81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC--TPN 158 (430)
Q Consensus 81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~--~~g 158 (430)
.++.|++++.+.+.+... . + ..+.. ....++++.|+++++.+.+ +|+++ +|+++|++.++..+. ..+
T Consensus 60 ~~p~v~~a~~~~~~~~~~-~-~----~~~~~---~~~~~l~~~la~~~~~~~~-~v~~~-~gg~ea~~~a~~~~~~~~~~ 128 (433)
T 1zod_A 60 CHPEIVSVIGEYAGKLDH-L-F----SEMLS---RPVVDLATRLANITPPGLD-RALLL-STGAESNEAAIRMAKLVTGK 128 (433)
T ss_dssp TCHHHHHHHHHHHHHCCC-C-C----TTCCC---HHHHHHHHHHHHHSCTTCC-EEEEE-SCHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHhCcc-c-c----cccCC---HHHHHHHHHHHHhCCCCcC-EEEEe-CchHHHHHHHHHHHHHhhCC
Confidence 388999999998865311 1 0 01111 3345777889999987665 77775 789999999887542 235
Q ss_pred CcEEEEeCChhHHHHHHHHHH-------h---C-CceEEecCCC--CcCCC------CCCccccc--cC----CCccEEE
Q 043610 159 DPVDYIVTGSWGDKAFKEAQK-------F---C-NPQVIWSGKA--EKYTK------IPNFDALE--QN----PDAKYLH 213 (430)
Q Consensus 159 d~vl~~~~g~~~~~~~~~a~~-------~---g-~~~~v~~~~~--~~~g~------~~d~~~l~--i~----~~~~lv~ 213 (430)
++|++.++++.+......... + . .+..++.... .+++. .+|+++++ ++ +++++|+
T Consensus 129 ~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi 208 (433)
T 1zod_A 129 YEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFI 208 (433)
T ss_dssp CEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 788877766554322111100 0 0 2333333110 01111 12456665 43 5677777
Q ss_pred EeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--c--cccccc--cEEEeCCCccccC-CccEEEEEc
Q 043610 214 ICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--P--VDVTRF--GVIYAGAQKNVGP-SGVTIVIVR 278 (430)
Q Consensus 214 i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~--idl~~~--d~~~~s~~K~~gp-~G~g~l~v~ 278 (430)
+..++++||.+.+ +|.++ +++|+++++|++|+ +|.. . ++.... |++ +++|++|+ ..+|+++++
T Consensus 209 ~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~--s~sK~~~~G~~ig~~~~~ 286 (433)
T 1zod_A 209 AEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDIL--TLSKTLGAGLPLAAIVTS 286 (433)
T ss_dssp ECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECHHHHTTSSCEEEEEC
T ss_pred EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEE--EecccccCCCCeeEEEEh
Confidence 7666688997654 24444 58999999999998 6532 1 121122 444 66799974 238999999
Q ss_pred HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc---CC-ce
Q 043610 279 KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS---NG-FY 354 (430)
Q Consensus 279 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~---~G-~~ 354 (430)
+++++.+.+. . +. .+.. .+.|..++.++.++++.+.+ . ...++.+++++++++.|++. .+ +.
T Consensus 287 ~~~~~~~~~~-~-~~-------~~~t-~~~~~~~~~a~~aal~~~~~-~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 352 (433)
T 1zod_A 287 AAIEERAHEL-G-YL-------FYTT-HVSDPLPAAVGLRVLDVVQR-D---GLVARANVMGDRLRRGLLDLMERFDCIG 352 (433)
T ss_dssp HHHHHHHHHT-T-CC-------CCCT-TTTCHHHHHHHHHHHHHHHH-T---THHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred HHHHHhhccC-C-CC-------CCCC-CCcCHHHHHHHHHHHHHHHh-C---CHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 9887764320 0 00 0011 34577788888899987764 2 35677777888888888752 11 11
Q ss_pred ecCCCCCCCccceEEEEcCCC--------chhHHHHHHHHHcCCeecCCCCCC--CeeEEeecCCCCHHHHHHHHHHHHH
Q 043610 355 KCPVEKSVRSFMNVPFTLEKS--------DLEAEFVKEAAKEKMVQLKGHRSV--GGMRASIYNAMPLAGVEKLVAFMKD 424 (430)
Q Consensus 355 ~~~~~~~~rs~~iv~f~~~~~--------~~~~~~~~~L~~~Gi~~~~g~~~~--g~iRis~~~~~t~edv~~ll~~L~~ 424 (430)
... ..+ ..+.+.+++. ....++.+.|.++||.+.+|.... +.+||++...++++|++++++.|++
T Consensus 353 ~~~----~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~ 427 (433)
T 1zod_A 353 DVR----GRG-LLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQ 427 (433)
T ss_dssp EEE----EET-TEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEE----EEE-EEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHH
Confidence 111 112 3445555421 112368888989999987654322 6899999888999999999999999
Q ss_pred HHHh
Q 043610 425 FQAK 428 (430)
Q Consensus 425 ~~~~ 428 (430)
++++
T Consensus 428 ~l~~ 431 (433)
T 1zod_A 428 AIER 431 (433)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8765
No 197
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.80 E-value=3.4e-18 Score=172.38 Aligned_cols=303 Identities=11% Similarity=0.022 Sum_probs=190.6
Q ss_pred cHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEeCcHHHHHHHHHhhcCC-CCC
Q 043610 82 PEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP-QEYSVLFLQGGATTQFAAVPLNLCT-PND 159 (430)
Q Consensus 82 ~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~-~~~~vv~~~~gaT~a~~~~~~sl~~-~gd 159 (430)
++.|++++.+.+.+....+. +.+.. ....++++.+++++|.+ ++ +|+++ +|++++++.++..+.. +||
T Consensus 61 ~p~v~~a~~~~~~~~~~~~~-----~~~~~---~~~~~l~~~la~~~~~~~~~-~v~~~-~gg~ea~~~ai~~~~~~~~~ 130 (419)
T 2eo5_A 61 HPEVIKIGIEQMQKLAHAAA-----NDFYN---IPQLELAKKLVTYSPGNFQK-KVFFS-NSGTEAIEASIKVVKNTGRK 130 (419)
T ss_dssp CHHHHHHHHHHHTTSCCCSC-----SCSCC---HHHHHHHHHHHHHSSCSSCE-EEEEE-SSHHHHHHHHHHHHHTTSCC
T ss_pred CHHHHHHHHHHHhhCccccc-----cccCC---HHHHHHHHHHHHhCCCCcCC-EEEEe-CchHHHHHHHHHHHHHhhCC
Confidence 79999999998864321111 11111 23457778899999986 54 77775 7899999998876432 389
Q ss_pred cEEEEeCChhHHH--HHHHH-----HH--h---C-CceEEecCCCCcC----CCC----------CCcccc--c-cC---
Q 043610 160 PVDYIVTGSWGDK--AFKEA-----QK--F---C-NPQVIWSGKAEKY----TKI----------PNFDAL--E-QN--- 206 (430)
Q Consensus 160 ~vl~~~~g~~~~~--~~~~a-----~~--~---g-~~~~v~~~~~~~~----g~~----------~d~~~l--~-i~--- 206 (430)
+|++.++.+.+.. ..... .+ . . .+..++... .+ |.. +|++++ + ++
T Consensus 131 ~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~ 208 (419)
T 2eo5_A 131 YIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPN--PYRNPWHINGYENPSELVNRVIEFIEDYIFVNLV 208 (419)
T ss_dssp EEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCC--SSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTC
T ss_pred cEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCc--cccccccccccccchhhHHHHHHHHHHHHHhhcc
Confidence 9998776654321 11110 00 0 1 334444422 12 100 234454 2 33
Q ss_pred --CCccEEEEeecCCCccccCC--C----Cccc-cCCCcEEEEeccCc-CCCCc----cccccc--cEEEeCCCcccc-C
Q 043610 207 --PDAKYLHICANETIHGVEFK--E----YPSA-KNSTGILVADMSSN-FCSKP----VDVTRF--GVIYAGAQKNVG-P 269 (430)
Q Consensus 207 --~~~~lv~i~~~~t~tG~~~p--e----i~~~-~~~g~~lvvD~a~s-~G~~~----idl~~~--d~~~~s~~K~~g-p 269 (430)
+++++|++..++++||.+.+ + |.++ +++|+++++|++|+ +|... ++.... |++ +++|.+| .
T Consensus 209 ~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~G 286 (419)
T 2eo5_A 209 PPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI--TLAKALGGG 286 (419)
T ss_dssp CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGTT
T ss_pred CCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEE--EecccccCC
Confidence 45667776666677897654 2 4443 57999999999987 65321 222122 454 5779996 3
Q ss_pred -CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 043610 270 -SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVID 348 (430)
Q Consensus 270 -~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~ 348 (430)
.++|+++++++++ .+ . .. . ....+.|..++.++.++|+.+. ++.++.+++++++++.|.
T Consensus 287 ~~riG~~~~~~~~~-~~-~---~~--------~-~~t~~~n~~~~~aa~aal~~~~------~~~~~~~~~~~~l~~~L~ 346 (419)
T 2eo5_A 287 IMPIGATIFRKDLD-FK-P---GM--------H-SNTFGGNALACAIGSKVIDIVK------DLLPHVNEIGKIFAEELQ 346 (419)
T ss_dssp TSCCEEEEEEGGGC-CC-------------------CCCCCHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHT
T ss_pred ccceEEEEEchHhh-cC-C---cc--------c-CCCCCCCHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHH
Confidence 5689999998875 42 1 00 0 0113457788888899998653 278889999999999998
Q ss_pred ccCCceecCCCCCCCccceEEEEcCC-CchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610 349 GSNGFYKCPVEKSVRSFMNVPFTLEK-SDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 349 ~~~G~~~~~~~~~~rs~~iv~f~~~~-~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~ 427 (430)
+ . +..+. ... ..+.+.+.+ ..... +.+.|.++||.+.++. .+++||++...++++|+++++++|+++++
T Consensus 347 ~-~-~~~~~----~~g-~~~~i~~~~~~~~~~-~~~~l~~~Gv~v~~~~--~~~lRis~~~~~t~e~i~~~l~~l~~~l~ 416 (419)
T 2eo5_A 347 G-L-ADDVR----GIG-LAWGLEYNEKKVRDR-IIGESFKRGLLLLPAG--RSAIRVIPPLVISEEEAKQGLDILKKVIK 416 (419)
T ss_dssp T-S-SSEEE----EET-TEEEEECSCHHHHHH-HHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred H-h-hhheE----eee-EEEEEEEecCccHHH-HHHHHHHCCCEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 6 3 21111 122 244566632 11233 7788888999987642 35799999888999999999999999886
Q ss_pred h
Q 043610 428 K 428 (430)
Q Consensus 428 ~ 428 (430)
+
T Consensus 417 ~ 417 (419)
T 2eo5_A 417 V 417 (419)
T ss_dssp H
T ss_pred h
Confidence 5
No 198
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.79 E-value=3.2e-18 Score=173.26 Aligned_cols=285 Identities=16% Similarity=0.043 Sum_probs=175.7
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-HH-HHHHHhC-CceEEecCCC
Q 043610 115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-AF-KEAQKFC-NPQVIWSGKA 191 (430)
Q Consensus 115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~~-~~a~~~g-~~~~v~~~~~ 191 (430)
...+++++.+++++|.+ ..+++ +||++|+..++.+++++||+|++....+.+.. .. ..++..| +++.++.
T Consensus 82 p~~~~le~~lA~l~g~~---~~v~~-~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~--- 154 (430)
T 3ri6_A 82 PTVEDLEQRLKNLTGAL---GVLAL-GSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDV--- 154 (430)
T ss_dssp HHHHHHHHHHHHHHTCS---EEEEE-SCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred HHHHHHHHHHHHHHCCC---cEEEE-CCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCC---
Confidence 34568899999999986 34555 57889999999999999999987776665542 11 1455667 6665543
Q ss_pred CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcccccc--ccEEEeCCC
Q 043610 192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTR--FGVIYAGAQ 264 (430)
Q Consensus 192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~--~d~~~~s~~ 264 (430)
.|+++++ +++++++|++++++|++|.+.| +|.++ +++|+++++|++++.+.. .+..+ .|+++.|++
T Consensus 155 ------~d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~-~~~~~~g~div~~S~s 227 (430)
T 3ri6_A 155 ------MDSLAVEHACDETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYL-LEAKRLGVDIEVLSST 227 (430)
T ss_dssp ------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTT-CCGGGGTCSEEEEECC
T ss_pred ------CCHHHHHHhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-CChHHcCCEEEEECCc
Confidence 1567776 7889999999999999999999 78886 689999999999987765 23323 379999999
Q ss_pred ccccCCc--cEEEEE-cHH-HHhccCCCCCc---------ccc-ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHH
Q 043610 265 KNVGPSG--VTIVIV-RKD-LLGNAQDKTPL---------MLD-YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLN 330 (430)
Q Consensus 265 K~~gp~G--~g~l~v-~~~-~~~~~~~~~p~---------~~~-~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~ 330 (430)
|++|++| +|.+++ +.+ .+.... ..+. +.. ...... ....++++....+.+...++. +.
T Consensus 228 K~l~g~g~~~gG~vv~~~~~~~~~~~-~~~~l~~~~g~~~~i~~~~~~~~-~~~g~~~~~~~a~l~l~~l~~------l~ 299 (430)
T 3ri6_A 228 KFISGGGTSVGGVLIDHGLFEWKSLP-SLAPYYAKAGPMAFLYKARKEVF-QNLGPSLSPHNAYLQSLGLET------MA 299 (430)
T ss_dssp CEEETTEEECCEEEEECSCSCGGGST-TTHHHHHHHGGGHHHHHHHHTHH-HHHCCCCCHHHHHHHHHHHHH------HH
T ss_pred ccccCCCCceEEEEEECChHHhhhcc-chhhhhhhhchhhHHHHHHHHHH-HhcCCCCCHHHHHHHHhhhhh------HH
Confidence 9997544 444444 221 111000 0000 000 000000 011123444433333334432 34
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceec--CCCCCCC----------ccc-eEEEEcCCCchhH-HHHHHHHHcCCeecCCC
Q 043610 331 EVEKMNRKKAELLYNVIDGSNGFYKC--PVEKSVR----------SFM-NVPFTLEKSDLEA-EFVKEAAKEKMVQLKGH 396 (430)
Q Consensus 331 ~v~~~~~~l~~~l~~~l~~~~G~~~~--~~~~~~r----------s~~-iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~ 396 (430)
.+.++..+.+..+.++|++.++++.+ |.-+... ... +++|.+++ .... +|++.|+..++....|.
T Consensus 300 ~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~-~~~~~~~~~~l~~~~~~~s~G~ 378 (430)
T 3ri6_A 300 LRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELES-KEASYRFMDALKLIRRATNIHD 378 (430)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS-HHHHHHHHHHCSSSEECSCCSC
T ss_pred HHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC-HHHHHHHHHhCCcceecCCCCC
Confidence 56677778888999999876665532 2111111 023 88999973 2122 46655543333221111
Q ss_pred -------------------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610 397 -------------------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 397 -------------------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~ 426 (430)
...+.||+|++. ||++.+++.|+..+
T Consensus 379 ~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~----E~~~dl~~dl~~al 429 (430)
T 3ri6_A 379 NKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI----EEIEDLKEDILQAL 429 (430)
T ss_dssp SSCEEECTGGGC---------CGGGSCTTEEEEECCS----SCHHHHHHHHHHHH
T ss_pred CCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHhh
Confidence 123579999985 66777777776654
No 199
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.79 E-value=3.2e-18 Score=168.15 Aligned_cols=314 Identities=14% Similarity=0.076 Sum_probs=190.4
Q ss_pred ecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhh
Q 043610 74 FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLN 153 (430)
Q Consensus 74 ~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~s 153 (430)
++.|+.|..+++++++.+.+. .+.+ ...++. .....++++.+++++|.+. . +++ +|+++++..++..
T Consensus 15 l~~~~~p~~~~~~~~~~~~~~----~~~~---~~~y~~--~~~~~~l~~~la~~~~~~~--~-i~~-~~G~~a~~~al~~ 81 (357)
T 3lws_A 15 QISGHGKRNVGVLKTAFAAVA----DEMA---SDQYGT--GAIIEPFEQKFADVLGMDD--A-VFF-PSGTMAQQVALRI 81 (357)
T ss_dssp ESSBSSCCBHHHHHHHHTTSC----TTCB---CEETTE--ETTHHHHHHHHHHHHTCSE--E-EEE-SCHHHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHHHHhh----cccC---cccccC--ChHHHHHHHHHHHHhCCCc--E-EEe-cCcHHHHHHHHHH
Confidence 456666777777766554321 1110 011111 1234578899999999853 3 555 6789999988888
Q ss_pred cCCCCCc-EEEEeCC-hhHHHH-HHHHHHhC-CceEEecCCCCcCCCCCCccccc-cCCCccEEEEeecCCCc-cccCC-
Q 043610 154 LCTPNDP-VDYIVTG-SWGDKA-FKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-QNPDAKYLHICANETIH-GVEFK- 226 (430)
Q Consensus 154 l~~~gd~-vl~~~~g-~~~~~~-~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-i~~~~~lv~i~~~~t~t-G~~~p- 226 (430)
+..+||+ ++++... ++.... ...+...| +++.++. +.+ .+|+++++ . +++++|++++++|++ |.+.+
T Consensus 82 ~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~----~~~-~~d~~~l~~~-~~~~~v~~~~p~np~~G~~~~~ 155 (357)
T 3lws_A 82 WSDETDNRTVAYHPLCHLEIHEQDGLKELHPIETILVGA----ADR-LMTLDEIKAL-PDIACLLLELPQREIGGVAPAF 155 (357)
T ss_dssp HHHHHTCCEEEECTTCHHHHSSTTHHHHHSSCEEEECSC----TTS-CCCHHHHHTC-CSCSEEEEESSBGGGTSBCCCH
T ss_pred HhhcCCCcEEEecccceeeeeccchhhhccCcEEEEecC----CCC-CcCHHHHhcC-cCcceEEEEcccccCCceeCCH
Confidence 8778884 5544433 232210 01223345 5444442 123 47888887 4 459999999999998 99887
Q ss_pred -C---Cccc-cCCCcEEEEeccCcC------CCCcccc-ccccEEEeCCCccc-cCCccEEEEEcHHHHhccCCCCCccc
Q 043610 227 -E---YPSA-KNSTGILVADMSSNF------CSKPVDV-TRFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPLML 293 (430)
Q Consensus 227 -e---i~~~-~~~g~~lvvD~a~s~------G~~~idl-~~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~~~ 293 (430)
+ |.++ +++|+++++|+++.+ |.-..++ ...|+++.|+||++ ||.| |+++.++++++.+.....
T Consensus 156 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g-g~~~~~~~~~~~~~~~~~--- 231 (357)
T 3lws_A 156 SELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAG-AILAGPAAFCQTARIWKR--- 231 (357)
T ss_dssp HHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSC-EEEEECHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCce-EEEEcCHHHHHHHHHHHH---
Confidence 3 4444 589999999998762 2111122 23478899999999 6988 999999988776432000
Q ss_pred cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC
Q 043610 294 DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE 373 (430)
Q Consensus 294 ~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~ 373 (430)
..+....+.+.... ++..+|+... +..++..++++++++.|++..|+++.. .++ .++ .+.+.++
T Consensus 232 ------~~~~~~~~~~~~~~-~~~~~l~~~~------~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~-~~~-~~~~~~~ 295 (357)
T 3lws_A 232 ------RYGGDLISLYPYIV-SADYYYELRK------DRMGQYYEQAKQLAEQFNALPGVHTTP-EVP-VSN-MFHLHFD 295 (357)
T ss_dssp ------HTTCCCSCCHHHHH-HHHHHHHHHT------TCHHHHHHHHHHHHHHHHTSTTEEEES-SSC-SSS-EEEEEEE
T ss_pred ------HhcCCcccchHHHH-HHHHHHHHHH------HHHHHHHHHHHHHHHHHHhCCCCeecc-CCC-cce-EEEEEec
Confidence 00001112222222 2224454321 223345667888999998766887732 111 232 4556666
Q ss_pred CCc-h-hHHHHHHHHHcCCeecCCCCC-CC--eeEEeecCC---CCHHHHHHHHHHHHHHH
Q 043610 374 KSD-L-EAEFVKEAAKEKMVQLKGHRS-VG--GMRASIYNA---MPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 374 ~~~-~-~~~~~~~L~~~Gi~~~~g~~~-~g--~iRis~~~~---~t~edv~~ll~~L~~~~ 426 (430)
+.. . ..++.+.|.++||.+.+|... .+ .+|++++.. .+++++++.++.|++.+
T Consensus 296 ~~~~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 296 GQAADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp SCHHHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred CChHHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 421 1 236888899999998876421 23 799998753 47888888888887653
No 200
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.79 E-value=2.9e-18 Score=173.17 Aligned_cols=287 Identities=13% Similarity=0.006 Sum_probs=175.6
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEE-ecCC
Q 043610 115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVI-WSGK 190 (430)
Q Consensus 115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v-~~~~ 190 (430)
...+++++.+++++|.+ +.+++ ++|++|++.++..++++||+|++....+.+.. |...++..| +++.+ +.
T Consensus 58 ~~~~~l~~~la~~~g~~---~~v~~-~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-- 131 (421)
T 2ctz_A 58 PTVDVLEKRLAALEGGK---AALAT-ASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSRE-- 131 (421)
T ss_dssp HHHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTT--
T ss_pred hHHHHHHHHHHHHhCCC---ceEEe-cCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCC--
Confidence 35678999999999986 23555 46799999999988899999988776665542 222245567 55544 32
Q ss_pred CCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccC-cCCC--CccccccccEEEeC
Q 043610 191 AEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSS-NFCS--KPVDVTRFGVIYAG 262 (430)
Q Consensus 191 ~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~-s~G~--~~idl~~~d~~~~s 262 (430)
.|+++++ +++++++|++++++|++|.+.| +|.++ +++|+++++|++| ++|. .++++ ..|++++|
T Consensus 132 -------~d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~~~~~~-~~Di~~~s 203 (421)
T 2ctz_A 132 -------ERPEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLLRPLAW-GAALVTHS 203 (421)
T ss_dssp -------CCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSCCGGGG-TCSEEEEE
T ss_pred -------CCHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccCCcccc-CCeEEEEC
Confidence 2567776 7889999999999999999999 78886 6899999999999 8775 23322 24899999
Q ss_pred CCccccCCc--cEEEEEcH---HH----HhccCCCCCccccccc--------hhh--cC----CCCCCccHHHHHHHHHH
Q 043610 263 AQKNVGPSG--VTIVIVRK---DL----LGNAQDKTPLMLDYKI--------HDE--NN----SLYNTPPCYCIYMCGLV 319 (430)
Q Consensus 263 ~~K~~gp~G--~g~l~v~~---~~----~~~~~~~~p~~~~~~~--------~~~--~~----~~~~T~~~~~~~a~~~a 319 (430)
+||++|.+| +|++++.+ ++ ++.+.+..+.+..... ... .. ......+....+.+...
T Consensus 204 ~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~ 283 (421)
T 2ctz_A 204 LTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLG 283 (421)
T ss_dssp TTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHH
T ss_pred CcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcC
Confidence 999997444 68777752 12 1222211111110000 000 00 00113333333333333
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec--CCCC-------------CCCccceEEEEcCCCchhH-HHHH
Q 043610 320 FEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC--PVEK-------------SVRSFMNVPFTLEKSDLEA-EFVK 383 (430)
Q Consensus 320 l~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~--~~~~-------------~~rs~~iv~f~~~~~~~~~-~~~~ 383 (430)
++ .+....++..++++++.+.|.+.+++..+ +..+ ..+ ..+++|.+++..... .+..
T Consensus 284 l~------~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~-g~ivsf~l~~~~~~~~~~~~ 356 (421)
T 2ctz_A 284 ME------TLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKP-GAVLTFGLKGGYEAAKRFIS 356 (421)
T ss_dssp HT------THHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCC-CSEEEEEETTHHHHHHHHHH
T ss_pred cc------hHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCC-ceEEEEEeCCCHHHHHHHHH
Confidence 43 24455666668999999999986677654 2111 123 357889987410111 3444
Q ss_pred HHHHcCCeecCC-------------C------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610 384 EAAKEKMVQLKG-------------H------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 384 ~L~~~Gi~~~~g-------------~------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~ 426 (430)
.|...++....| + ...+.||+|++. ||++.+++.|++.+
T Consensus 357 ~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~----e~~~~li~~l~~al 420 (421)
T 2ctz_A 357 RLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL----EHVEDLKAELKEAL 420 (421)
T ss_dssp TCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS----SCHHHHHHHHHHHT
T ss_pred hCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHh
Confidence 443323222112 1 013679999986 46666666666543
No 201
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.78 E-value=6.8e-18 Score=169.72 Aligned_cols=277 Identities=15% Similarity=0.054 Sum_probs=179.2
Q ss_pred HHHHHHHHHHhh-hccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEE-eCcHHHHHHHHHhhcCCCCCc
Q 043610 83 EKVLLKAQSELY-NWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFL-QGGATTQFAAVPLNLCTPNDP 160 (430)
Q Consensus 83 ~~V~~a~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~-~~gaT~a~~~~~~sl~~~gd~ 160 (430)
..|+++|.+... +....+.+. +.+++. -.+++++.+++++|++. .+++. ++|||+|+..++.++++|||+
T Consensus 32 ~~vl~a~~~~~~~~~~~~~~~~---~~y~~~---~~~~Le~~lA~l~g~e~--alv~p~~~sGt~Ai~~al~all~~GD~ 103 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHFHPSTG---YGYDDE---GRDTLERVYATVFKTEA--ALVRPQIISGTHAISTVLFGILRPDDE 103 (409)
T ss_dssp HHHHHHHHHTTCCGGGGCCCCT---TCTTCH---HHHHHHHHHHHHHTCSE--EEEETTSCSHHHHHHHHHHHHCCTTCE
T ss_pred HHHHHHHHHhhhhhhccCCCcC---CCCChh---HHHHHHHHHHHHhCCCc--EEEECCCccHHHHHHHHHHHhcCCCCE
Confidence 468888887642 211112221 112222 25678889999999864 33321 478999999999999999999
Q ss_pred EEEEe-CChhHHH-HH-------HHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEee----cCCCcccc
Q 043610 161 VDYIV-TGSWGDK-AF-------KEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICA----NETIHGVE 224 (430)
Q Consensus 161 vl~~~-~g~~~~~-~~-------~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~----~~t~tG~~ 224 (430)
|++.. ..+.+.. .. ..++..| +++.++..+ .+ .+|+++++ +++++++|++++ ++|++|.+
T Consensus 104 Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~---~g-~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v 179 (409)
T 3jzl_A 104 LLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLE---NG-DVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTI 179 (409)
T ss_dssp EEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCT---TS-CCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCH
T ss_pred EEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCC---CC-CcCHHHHHHhccCCCeEEEEECCCCCCCCCcCcc
Confidence 98766 4443332 11 1234557 666666532 23 47888887 788999999999 99999999
Q ss_pred CC--CCccc-cC--CCcEEEEeccCcCCCC---ccccccccEEEeCCCccccCCc---cEEEEEcHHHHhccCC--CCCc
Q 043610 225 FK--EYPSA-KN--STGILVADMSSNFCSK---PVDVTRFGVIYAGAQKNVGPSG---VTIVIVRKDLLGNAQD--KTPL 291 (430)
Q Consensus 225 ~p--ei~~~-~~--~g~~lvvD~a~s~G~~---~idl~~~d~~~~s~~K~~gp~G---~g~l~v~~~~~~~~~~--~~p~ 291 (430)
.| +|.++ ++ +|+++++|++++.+.. +.++ ..|++++|+||++|..| .|+++.++++++.+.. ..+.
T Consensus 180 ~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~~~-g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~ 258 (409)
T 3jzl_A 180 EKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPEV-GADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPG 258 (409)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSGGG-TCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTT
T ss_pred ccHHHHHHHHHhhCCCCEEEEeCCcccccccCCcccc-CCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhcccc
Confidence 99 78886 67 8999999999887763 3332 24899999999996433 3999999999887532 1111
Q ss_pred cccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEE
Q 043610 292 MLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFT 371 (430)
Q Consensus 292 ~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~ 371 (430)
+ .. ....++.. .+++...++. +..+.++..+.+.++.++|++ .|+++.+.....+...+++|.
T Consensus 259 ~-g~-------~~g~~~~~--~~~~l~gl~~------~~~r~~~~~~~a~~la~~L~~-~g~~v~p~~~~~~~~~i~~i~ 321 (409)
T 3jzl_A 259 I-GR-------EAGASLYS--LLEMYQGFFL------APHVTAQAIKGARFTAAMLAE-FGVEADPVWDAPRTDLIQSVS 321 (409)
T ss_dssp T-GG-------GCCCCTTC--HHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHH-TTCEEESCTTSCCSSSCCEEE
T ss_pred c-cc-------cccccHHH--HHHHHHHHhh------HHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCCCccEEEEEE
Confidence 1 00 01111211 2223333332 346677788889999999997 788876532222444578888
Q ss_pred cCCCchhHHHHHHHHHcC
Q 043610 372 LEKSDLEAEFVKEAAKEK 389 (430)
Q Consensus 372 ~~~~~~~~~~~~~L~~~G 389 (430)
+++.....+|++.|+...
T Consensus 322 l~~~~~~~~~~~~L~~~~ 339 (409)
T 3jzl_A 322 FHNKEKMVAFAQAIQAAS 339 (409)
T ss_dssp CSCHHHHHHHHHHHHHTS
T ss_pred eCCHHHHHHHHHHHHhcC
Confidence 874221226888888764
No 202
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.78 E-value=4e-19 Score=181.31 Aligned_cols=314 Identities=10% Similarity=0.043 Sum_probs=186.7
Q ss_pred HHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCC-----
Q 043610 83 EKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTP----- 157 (430)
Q Consensus 83 ~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~----- 157 (430)
+.|++++.+.+.. |...| ...+ ...++++.+++++|.+ +++++ +|+|+|++.++..+.++
T Consensus 53 ~~v~~a~~~~l~~----~~~~y---~~~~----~~~~l~~~la~~~~~~---~v~~t-~~gt~A~~~al~~~~~~~~~~~ 117 (467)
T 2oqx_A 53 GAVTQSMQAAMMR----GDEAY---SGSR----SYYALAESVKNIFGYQ---YTIPT-HQGRGAEQIYIPVLIKKREQEK 117 (467)
T ss_dssp SCCCHHHHHHTTS----CCCCS---SSCH----HHHHHHHHHHHHHCCS---EEEEE-C--CCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc----Cccee---ccCc----hhHHHHHHHHHHhCcC---cEEEc-CCcHHHHHHHHHHHhccccccC
Confidence 7788888777632 11111 1112 2347789999999873 67775 68899999998888777
Q ss_pred C----CcEEEEeCChhHHHHHHHHHHhC-CceEEec------CCCCcCCCCCCccccc--cC----CCccEEEEeecCCC
Q 043610 158 N----DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWS------GKAEKYTKIPNFDALE--QN----PDAKYLHICANETI 220 (430)
Q Consensus 158 g----d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~------~~~~~~g~~~d~~~l~--i~----~~~~lv~i~~~~t~ 220 (430)
| |+|++ ...++.. +.......| .+..... ....++...+|+++|+ ++ +++++|++++++|+
T Consensus 118 G~~~~d~Ii~-~~~h~~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~ 195 (467)
T 2oqx_A 118 GLDRSKMVAF-SNYFFDT-TQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNS 195 (467)
T ss_dssp CCCTTTCEEE-ESSCCHH-HHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCG
T ss_pred CCCccceEEe-ccccccc-chhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccC
Confidence 8 88654 4444332 111222233 2222111 1000122246788887 54 47999999999999
Q ss_pred c-cccCC-----CCccc-cCCCcEEEEeccCcC-----------CCCccc---c-----ccccEEEeCCCccccCC-ccE
Q 043610 221 H-GVEFK-----EYPSA-KNSTGILVADMSSNF-----------CSKPVD---V-----TRFGVIYAGAQKNVGPS-GVT 273 (430)
Q Consensus 221 t-G~~~p-----ei~~~-~~~g~~lvvD~a~s~-----------G~~~id---l-----~~~d~~~~s~~K~~gp~-G~g 273 (430)
+ |.+.+ +|.++ +++|+++++|++|++ +...++ + ...|++++|+||++|++ | |
T Consensus 196 ~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g 274 (467)
T 2oqx_A 196 AGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMG-G 274 (467)
T ss_dssp GGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSC-E
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCCCc-e
Confidence 7 88777 35554 689999999988765 222222 1 23578889999999844 6 7
Q ss_pred EEEEcHH-HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCC
Q 043610 274 IVIVRKD-LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNG 352 (430)
Q Consensus 274 ~l~v~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G 352 (430)
+++.+++ +++.+....+ +..+. .....+++.+...+.++..+++... . +...++..++++++++.|.+. |
T Consensus 275 ~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~al~~~l~~~~---~-~~~~~~~~~~~~~l~~~L~~~-~ 345 (467)
T 2oqx_A 275 LLCMKDDSFFDVYTECRT-LCVVQ---EGFPTYGGLEGGAMERLAVGLYDGM---N-LDWLAYRIAQVQYLVDGLEEI-G 345 (467)
T ss_dssp EEEECSGGGHHHHHHHHH-HHHHT---TSSCCCCCCCHHHHHHHHHHHHHTT---C-HHHHHHHHHHHHHHHHHHHHT-T
T ss_pred EEEecChhHHHHHHHHHH-hhhcc---CCcccccchhhhHHHHHHHhhHhhh---h-HHHHHHHHHHHHHHHHHHHHC-C
Confidence 7777766 4332211001 00000 0111234555555544444433211 1 234455567888999999874 7
Q ss_pred ceecCCCCCCCccceEEEEcC----CCc---h-hHHHHHHH-HHcCCeecC-CC---C-----------CCCeeEEeecC
Q 043610 353 FYKCPVEKSVRSFMNVPFTLE----KSD---L-EAEFVKEA-AKEKMVQLK-GH---R-----------SVGGMRASIYN 408 (430)
Q Consensus 353 ~~~~~~~~~~rs~~iv~f~~~----~~~---~-~~~~~~~L-~~~Gi~~~~-g~---~-----------~~g~iRis~~~ 408 (430)
+.+.+ ..+ ..+.+.++ +.. . ..++.+.| .++||.+.+ |. . ..+.+|+++..
T Consensus 346 ~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~ 420 (467)
T 2oqx_A 346 VVCQQ----AGG-HAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPR 420 (467)
T ss_dssp CCEEE----ECS-SCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCT
T ss_pred Ceeec----CCc-eEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecC
Confidence 66541 223 34556653 111 1 12468888 888998765 31 0 12689999998
Q ss_pred C-CCHHHHHHHHHHHHHHHHh
Q 043610 409 A-MPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 409 ~-~t~edv~~ll~~L~~~~~~ 428 (430)
. ++++||+++++.|++++++
T Consensus 421 ~~~t~e~i~~~~~~l~~~l~~ 441 (467)
T 2oqx_A 421 ATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_dssp TTSCHHHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHHHhh
Confidence 8 9999999999999998763
No 203
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.78 E-value=3.6e-18 Score=171.33 Aligned_cols=274 Identities=13% Similarity=0.065 Sum_probs=176.3
Q ss_pred HHHHHHHHHh-CCC-----CCcEEEE-EeCcHHHHHHHH---HhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEe
Q 043610 119 KAESDLRALL-NIP-----QEYSVLF-LQGGATTQFAAV---PLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIW 187 (430)
Q Consensus 119 ~~r~~la~l~-g~~-----~~~~vv~-~~~gaT~a~~~~---~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~ 187 (430)
++|+.+++++ |.. ++ +|.+ .+.+++++++.+ +..+.++||+|++..+++.++ ...++..| +++.++
T Consensus 83 ~lr~~ia~~~~~~~~~~~~~~-~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~~~ 159 (409)
T 4eu1_A 83 SFVEEAQKLCFGPTCAALRDG-RIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNH--ESIFAKAGMELTPYS 159 (409)
T ss_dssp HHHHHHHHHHHCSSCHHHHTT-CEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHH--HHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHcCCCchhhccC-ceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhH--HHHHHHcCCeEEEEE
Confidence 5667777755 654 33 5632 347889999865 445568899999887776654 34566677 777777
Q ss_pred cCCCCcCCCCCCccccc--cC---CCccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCC-Cc-----
Q 043610 188 SGKAEKYTKIPNFDALE--QN---PDAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS-KP----- 250 (430)
Q Consensus 188 ~~~~~~~g~~~d~~~l~--i~---~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~-~~----- 250 (430)
..++ .+..+|+++++ +. ++++++++++++||||.+++ + |.++ +++|+++++|++++... .+
T Consensus 160 ~~~~--~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~ 237 (409)
T 4eu1_A 160 YYDP--ATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDA 237 (409)
T ss_dssp CEET--TTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHT
T ss_pred eecC--cCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccch
Confidence 6322 22347888886 42 35677777999999999999 4 5554 58999999999965332 21
Q ss_pred ccc----ccc-c-EEEeCCCccccCCc--cEEE--EE-cHH----HHhccCCCCCccccccchhhcCCCCCCccHHHHHH
Q 043610 251 VDV----TRF-G-VIYAGAQKNVGPSG--VTIV--IV-RKD----LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYM 315 (430)
Q Consensus 251 idl----~~~-d-~~~~s~~K~~gp~G--~g~l--~v-~~~----~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a 315 (430)
..+ +.. + +++.|++|.+|++| +|++ ++ +++ +++.+.. + .. ....+++...+.+
T Consensus 238 ~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~-------~---~~--~~~~~~~~~~~~~ 305 (409)
T 4eu1_A 238 FVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLAL-------L---IR--PMYNNPPLYGAWV 305 (409)
T ss_dssp HHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHH-------H---HH--HHHSSCCHHHHHH
T ss_pred HHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHH-------H---Hh--hhcCCCChHHHHH
Confidence 111 111 2 78899999999888 7886 44 455 3332211 0 00 0113556777777
Q ss_pred HHHHHHHHH--H--hcCHHHHHHHHHHHHHHHHHHHHccCC----ceecCCCCCCCccceEEEEcCCCchhHHHHHHH-H
Q 043610 316 CGLVFEYLL--E--LGGLNEVEKMNRKKAELLYNVIDGSNG----FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-A 386 (430)
Q Consensus 316 ~~~al~~l~--~--~~g~~~v~~~~~~l~~~l~~~l~~~~G----~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~ 386 (430)
+..+|+... + ...++..+++++++++++++.|.+ .| +.+.. + .. +.+.+ +. .+.+++.+| +
T Consensus 306 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~--~--~~-~~~~~-~~---~~~~~~~~ll~ 375 (409)
T 4eu1_A 306 VSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKA-CGSVHDWSHIE--R--QV-GMMAY-TG---LTREQVELLRS 375 (409)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCSCCHHHH--H--SC-SSEEE-CC---CCHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCcceec--C--Cc-eEEEE-eC---CCHHHHHHHHH
Confidence 777776320 0 113678889999999999999987 55 44332 1 12 22332 21 233455555 5
Q ss_pred HcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610 387 KEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 387 ~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~ 426 (430)
++||.+.+| .||+++.. +++|+++++++|++++
T Consensus 376 ~~gv~v~p~------~Ri~~~~~-~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 376 EYHIYMTLN------GRAAVSGL-NSTNVEYVSQAIHNVT 408 (409)
T ss_dssp HHCEECCTT------CEEEGGGC-CTTTHHHHHHHHHHHH
T ss_pred cCCEEEcCC------CEEEEEec-CHhhHHHHHHHHHHHh
Confidence 679998864 58888754 4566999999999876
No 204
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.78 E-value=4.8e-18 Score=172.88 Aligned_cols=326 Identities=8% Similarity=0.009 Sum_probs=195.1
Q ss_pred CCCceeecCC--C---CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610 68 EDRVFNFAAG--P---ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG 142 (430)
Q Consensus 68 ~~~~~l~~~g--p---~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g 142 (430)
.+++++|..| . +..++.|++++.+.+.+... . ...... +...++++.|+++++.+. +|+| ++|
T Consensus 48 g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~--~----~~~~~~---~~~~~la~~l~~~~~~~~--~v~~-~~g 115 (452)
T 3n5m_A 48 GKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSY--F----PMSQSH---EPAIKLAEKLNEWLGGEY--VIFF-SNS 115 (452)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCC--C----CTTSEE---HHHHHHHHHHHHHHTSCE--EEEE-ESS
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCC--c----ccccCC---HHHHHHHHHHHHhCCCCc--eEEE-eCc
Confidence 4445666555 2 22478999999998864211 0 011111 345578888999998764 5555 589
Q ss_pred HHHHHHHHHhhcC-----C---CCCcEEEEeCChhHHHHHHHHHHh-CC-------------ceEEecCCCC--cCCC--
Q 043610 143 ATTQFAAVPLNLC-----T---PNDPVDYIVTGSWGDKAFKEAQKF-CN-------------PQVIWSGKAE--KYTK-- 196 (430)
Q Consensus 143 aT~a~~~~~~sl~-----~---~gd~vl~~~~g~~~~~~~~~a~~~-g~-------------~~~v~~~~~~--~~g~-- 196 (430)
+++|++.++..+. . ++++|++...++.+... .+... |. ...++..... +++.
T Consensus 116 gseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (452)
T 3n5m_A 116 GSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTM--ATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERE 193 (452)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSH--HHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTS
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCH--HHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCch
Confidence 9999999888765 4 67888888777665422 12222 21 1122211000 0000
Q ss_pred ----CCCccccc--cC----CCccEEEEeec-CCCccccCC--C----Cccc-cCCCcEEEEeccCc-CCCC--cccccc
Q 043610 197 ----IPNFDALE--QN----PDAKYLHICAN-ETIHGVEFK--E----YPSA-KNSTGILVADMSSN-FCSK--PVDVTR 255 (430)
Q Consensus 197 ----~~d~~~l~--i~----~~~~lv~i~~~-~t~tG~~~p--e----i~~~-~~~g~~lvvD~a~s-~G~~--~idl~~ 255 (430)
..++++|+ +. +++++|++..+ +| +|.+.| + |.++ +++|+++|+|++|+ +|.. .+-.+.
T Consensus 194 ~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~ 272 (452)
T 3n5m_A 194 NIYDVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMN 272 (452)
T ss_dssp CGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGG
T ss_pred hhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhh
Confidence 00045665 44 56777888777 78 998875 3 4444 58999999999987 5422 222222
Q ss_pred c----cEEEeCCCccccC--CccEEEEEcHHHHhccCC---CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHh
Q 043610 256 F----GVIYAGAQKNVGP--SGVTIVIVRKDLLGNAQD---KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLEL 326 (430)
Q Consensus 256 ~----d~~~~s~~K~~gp--~G~g~l~v~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~ 326 (430)
+ |++ +++|.+|. ..+|++++++++++.+.+ ..+.. .+.+ .+.|..+++++.++|+.+.++
T Consensus 273 ~~~~~di~--t~sK~l~~G~~~ig~~~~~~~i~~~~~~~~~~~~~~--------~~~t-~~~~~~~~aaa~aal~~~~~~ 341 (452)
T 3n5m_A 273 YDVKPDII--TMAKGITSAYLPLSATAVKREIYEAFKGKGEYEFFR--------HINT-FGGNPAACALALKNLEIIENE 341 (452)
T ss_dssp TTCCCSEE--EECGGGGTTSSCCEEEEEEHHHHGGGCSSSTTCSCC--------CCCS-STTCHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCEE--eecccccCCCcceEEEEECHHHHHHHhhccCCCCcc--------ccCC-CCCCHHHHHHHHHHHHHHHhc
Confidence 2 455 46699953 457999999999887642 11111 0112 345677888888899877542
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHcc----CCceecCCCCCCCccceEEEEcCCC-c--------hhHHHHHHHHHcCCeec
Q 043610 327 GGLNEVEKMNRKKAELLYNVIDGS----NGFYKCPVEKSVRSFMNVPFTLEKS-D--------LEAEFVKEAAKEKMVQL 393 (430)
Q Consensus 327 ~g~~~v~~~~~~l~~~l~~~l~~~----~G~~~~~~~~~~rs~~iv~f~~~~~-~--------~~~~~~~~L~~~Gi~~~ 393 (430)
.+.++.+++.+++++.|.+. .++.... ... ..+.+.+.+. . ...++.+.|.++||.+.
T Consensus 342 ----~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~ 412 (452)
T 3n5m_A 342 ----NLIERSAQMGSLLLEQLKEEIGEHPLVGDIR----GKG-LLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIG 412 (452)
T ss_dssp ----THHHHHHHHHHHHHHHHHHHHTTCTTEEEEE----ESS-SCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECE
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE----EEE-EEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEe
Confidence 34455555555555555542 2222111 112 2233443210 0 11257888889999987
Q ss_pred CCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 394 KGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 394 ~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
++.. ..+.+||++...++++|++++++.|++++++
T Consensus 413 ~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 413 RNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp ECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred ecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 6432 2468999999889999999999999998764
No 205
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.76 E-value=5.2e-18 Score=170.52 Aligned_cols=322 Identities=10% Similarity=0.050 Sum_probs=194.4
Q ss_pred CCceeecCCC-------CCCcHHHHHHHHHHh-hhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCc-EEE
Q 043610 69 DRVFNFAAGP-------ANLPEKVLLKAQSEL-YNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEY-SVL 137 (430)
Q Consensus 69 ~~~~l~~~gp-------~~~~~~V~~a~~~~~-~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~-~vv 137 (430)
+++++|+.|- .++++.|.+++. .+ .+....+++ .....+++ .+.+.+.+....+. +++. +++
T Consensus 29 ~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~---~~~G~~~l---r~aia~~~~~~~~~~~~~~~i~i~ 101 (405)
T 3k7y_A 29 EEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYL---LGNGTEDF---STLTQNLIFGNNSKYIEDKKICTI 101 (405)
T ss_dssp SSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCC---TTSSCHHH---HHHHHHHHHCSSCTTTTTTCEEEE
T ss_pred cCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCC---CCCCcHHH---HHHHHHHHcCCCCccccccceEEE
Confidence 5688998772 346788888866 32 221111221 11122322 22333333222222 2231 235
Q ss_pred EEeCcHHHHHHHHHhhcCC--CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC--CCcc
Q 043610 138 FLQGGATTQFAAVPLNLCT--PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN--PDAK 210 (430)
Q Consensus 138 ~~~~gaT~a~~~~~~sl~~--~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~--~~~~ 210 (430)
+ +.|+++|+..++..+.. | |+|++..+.+.++. ..++..| +++.++..++..+ .+|+++++ +. ++++
T Consensus 102 ~-t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~--~~~~~~g~~~~~v~~~~~~~~--~~d~~~l~~~l~~~~~~~ 175 (405)
T 3k7y_A 102 Q-CIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHV--NMIESRGFNLKYINFFDYNLI--DINYDLFLNDLRNIPNGS 175 (405)
T ss_dssp E-EEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHH--HHHHTTTCEEEEECCEETTTT--EECHHHHHHHHHHSCSSC
T ss_pred E-cCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHH--HHHHHcCCeEEEEeccccccC--CcCHHHHHHHHHhCCCCe
Confidence 5 57899999998887765 8 99998887776653 3556677 7777776322123 47888876 43 5678
Q ss_pred EEEEeec-CCCccccCC--C---Cccc-cCCCcEEEEeccCc-CCCC--cc---cc----cccc--EEEeCCCccccCCc
Q 043610 211 YLHICAN-ETIHGVEFK--E---YPSA-KNSTGILVADMSSN-FCSK--PV---DV----TRFG--VIYAGAQKNVGPSG 271 (430)
Q Consensus 211 lv~i~~~-~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s-~G~~--~i---dl----~~~d--~~~~s~~K~~gp~G 271 (430)
+|+++.+ +||||..++ + |.++ +++|++++.|+++. +... .- .+ +..+ +++.|++|.+|++|
T Consensus 176 ~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G 255 (405)
T 3k7y_A 176 SVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYG 255 (405)
T ss_dssp EEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTT
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCcc
Confidence 8888765 899999999 3 4443 57899999999865 3211 10 11 1112 67899999999889
Q ss_pred --cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHH--HH--hcCHHHHHHHHHHHHHH
Q 043610 272 --VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYL--LE--LGGLNEVEKMNRKKAEL 342 (430)
Q Consensus 272 --~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l--~~--~~g~~~v~~~~~~l~~~ 342 (430)
+|++++ ++++++.+... + ..... .....++..++.++..+|+.- .+ ...++.+++++++.++.
T Consensus 256 lRiG~~~~~~~~~~~~~~~~~~----l--~~~~~--~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~ 327 (405)
T 3k7y_A 256 ERAGALHIVCKNQEEKKIVFNN----L--CFIVR--KFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRIL 327 (405)
T ss_dssp TTEEEEEEECSSHHHHHHHHHH----H--HHHHH--TTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEEeCCHHHHHHHHHH----H--HHHHh--cccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888764 45555432100 0 00000 112345667777777666531 10 11256677889999999
Q ss_pred HHHHHH----ccCC----ceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHH
Q 043610 343 LYNVID----GSNG----FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAG 414 (430)
Q Consensus 343 l~~~l~----~~~G----~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~ed 414 (430)
+.+.|+ + .| +.+.+ + ...+-+.+.++ .+++++|.++||.+.+|. |||+.. .++++
T Consensus 328 l~~~L~~~~~~-~g~~~~~~~~~--p--~gg~f~~~~l~-----~~~~~~L~~~gV~v~p~~------Ris~a~-~~~~~ 390 (405)
T 3k7y_A 328 FFNKLETYQKK-YNLNYDWNVYK--K--QRGLFSFVPLL-----AKIAEHLKTHHIYIINNG------RINVSG-ITKNN 390 (405)
T ss_dssp HHHHHHHHGGG-GTCCCCGGGGS--S--CCSSEEECGGG-----GGGTTTTTTTTEECCTTS------EEEGGG-CCTTH
T ss_pred HHHHHHhhhhh-cCCCCCCcccc--C--CceEEEecCCC-----HHHHHHHHHCCEeecCCC------eEEEec-cCHHH
Confidence 999998 6 44 44432 1 22222222232 245667767799988752 999873 35789
Q ss_pred HHHHHHHHHHHHHh
Q 043610 415 VEKLVAFMKDFQAK 428 (430)
Q Consensus 415 v~~ll~~L~~~~~~ 428 (430)
|++++++|+++++.
T Consensus 391 i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 391 VDYIADKICLSLSQ 404 (405)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998763
No 206
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.76 E-value=5.2e-18 Score=171.26 Aligned_cols=249 Identities=15% Similarity=0.093 Sum_probs=166.5
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEE-eCcHHHHHHHHHhhcCCCCCcEEEEe-CChhHHH-HH--------HHHHHhC-Cce
Q 043610 117 IEKAESDLRALLNIPQEYSVLFL-QGGATTQFAAVPLNLCTPNDPVDYIV-TGSWGDK-AF--------KEAQKFC-NPQ 184 (430)
Q Consensus 117 ~~~~r~~la~l~g~~~~~~vv~~-~~gaT~a~~~~~~sl~~~gd~vl~~~-~g~~~~~-~~--------~~a~~~g-~~~ 184 (430)
.+++++.+++++|++. .+++. ++||++|+..++.++++|||+|++.. ..+.+.. .. ..++..| +++
T Consensus 75 ~~~Le~~lA~l~g~e~--alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~ 152 (427)
T 3i16_A 75 RDSLDAVYARVFNTES--ALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYK 152 (427)
T ss_dssp HHHHHHHHHHHHTCSE--EEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEE
T ss_pred HHHHHHHHHHHhCCcc--eEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEE
Confidence 5678899999999974 33320 36789999999999999999998765 4444332 11 2234457 666
Q ss_pred EEecCCCCcCCCCCCccccc--cC--CCccEEEEee----cCCCccccCC--CCccc-cC--CCcEEEEeccCcCCCC--
Q 043610 185 VIWSGKAEKYTKIPNFDALE--QN--PDAKYLHICA----NETIHGVEFK--EYPSA-KN--STGILVADMSSNFCSK-- 249 (430)
Q Consensus 185 ~v~~~~~~~~g~~~d~~~l~--i~--~~~~lv~i~~----~~t~tG~~~p--ei~~~-~~--~g~~lvvD~a~s~G~~-- 249 (430)
.++..+ .+ .+|+++++ ++ +++++|++++ ++|++|.+.| +|.++ ++ +|+++++|++++.+..
T Consensus 153 ~v~~~~---~g-~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~ 228 (427)
T 3i16_A 153 QVDLKE---DG-KPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTK 228 (427)
T ss_dssp ECCCCT---TS-SCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSS
T ss_pred EecCcc---CC-CcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccC
Confidence 666532 23 47888887 66 8999999999 9999999999 78886 66 8999999999987763
Q ss_pred -ccccccccEEEeCCCccccC---CccEEEEEcHHHHhccCC--CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHH
Q 043610 250 -PVDVTRFGVIYAGAQKNVGP---SGVTIVIVRKDLLGNAQD--KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYL 323 (430)
Q Consensus 250 -~idl~~~d~~~~s~~K~~gp---~G~g~l~v~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l 323 (430)
++++ ..|+++.|+||++|+ +..|+++.++++++.+.. ..+. +. .. ..+.....+. +++-+
T Consensus 229 ~p~~~-gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~-~g--------~~-~~~~~~~a~~---~l~gl 294 (427)
T 3i16_A 229 EPTDV-GADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPG-IG--------GE-CGSTFGVVRS---MYQGL 294 (427)
T ss_dssp CGGGG-TCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTT-TG--------GG-CCCCTTCHHH---HHHHH
T ss_pred Ccccc-CCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCc-cC--------cc-CCccHHHHHH---HHHHH
Confidence 2222 248999999999975 224999999999887532 1110 00 00 0111111222 23322
Q ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcC
Q 043610 324 LELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEK 389 (430)
Q Consensus 324 ~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~G 389 (430)
. -+..+.++..+.+.++.++|++ .|+++.+.....+...+++|.+.+.+...+|++.|....
T Consensus 295 ~---~~~~r~~~~~~~a~~la~~L~~-~g~~V~p~~~~~~~~~i~~i~l~~~~~~~~f~~~l~~~~ 356 (427)
T 3i16_A 295 F---LAPHISMEALKGAILCSRIMEL-AGFEVMPKYDEKRSDIIQSIKFNDKDKLIEFCKGIQTGS 356 (427)
T ss_dssp H---HHHHHHHHHHHHHHHHHHHHHH-TTCEEESCTTSCCSSSCEEEECSSHHHHHHHHHHHHHTC
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHh-CCCeecCCCCCCCccEEEEEEECCHHHHHHHHHHHhhcC
Confidence 2 1356778888888999999986 788876532222333478888874221226888887763
No 207
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.76 E-value=8.6e-17 Score=164.13 Aligned_cols=332 Identities=10% Similarity=-0.026 Sum_probs=198.4
Q ss_pred CCCCceeecCC--C---CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610 67 QEDRVFNFAAG--P---ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG 141 (430)
Q Consensus 67 ~~~~~~l~~~g--p---~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ 141 (430)
..+++++|..| . +..++.|++++.+.+.+... ..+ ...... +..+++++.|+++++.+.+ +|+|+ +
T Consensus 49 ~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~-~~~---~~~~~~---~~~~~la~~l~~~~~~~~~-~v~~~-~ 119 (460)
T 3gju_A 49 NGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAY-YHA---YVGHGT---EASITLAKMIIDRAPKGMS-RVYFG-L 119 (460)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSC-CCC---CTTCCC---HHHHHHHHHHHHHSCTTEE-EEEEE-S
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccc-ccc---ccccCC---HHHHHHHHHHHhhCCCCcC-EEEEe-C
Confidence 34455666554 2 23478999999998865321 111 111111 2455788888898876654 67665 7
Q ss_pred cHHHHHHHHHhhcCC--------CCCcEEEEeCChhHHHHHHHHHHh-C-------------CceEEecCCC---CcCCC
Q 043610 142 GATTQFAAVPLNLCT--------PNDPVDYIVTGSWGDKAFKEAQKF-C-------------NPQVIWSGKA---EKYTK 196 (430)
Q Consensus 142 gaT~a~~~~~~sl~~--------~gd~vl~~~~g~~~~~~~~~a~~~-g-------------~~~~v~~~~~---~~~g~ 196 (430)
|+++|++.++..+.. ++++|++.+.++.+.... +... + .+..++.... .+.+
T Consensus 120 gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g- 196 (460)
T 3gju_A 120 SGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVM--TGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRS- 196 (460)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHH--HHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTT-
T ss_pred chHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHH--HhhccCCcccccccCCCCCCCEEeCCCccccCCccc-
Confidence 899999998877642 457777777666553221 1111 1 2233332110 0011
Q ss_pred CCC--------ccccc--cC----CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccc
Q 043610 197 IPN--------FDALE--QN----PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVD 252 (430)
Q Consensus 197 ~~d--------~~~l~--i~----~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~id 252 (430)
.+ +++|+ +. +++++|++..+++++|.+.+ +|.++ +++|+++|+|++|+ +|-. ...
T Consensus 197 -~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~ 275 (460)
T 3gju_A 197 -MSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFG 275 (460)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCH
T ss_pred -cChhHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccch
Confidence 11 35565 33 46778888877888888665 24444 58999999999987 6532 121
Q ss_pred cccc----cEEEeCCCccccC--CccEEEEEcHHHHhccCCC----CCccccccchhhcCCCCCCccHHHHHHHHHHHHH
Q 043610 253 VTRF----GVIYAGAQKNVGP--SGVTIVIVRKDLLGNAQDK----TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY 322 (430)
Q Consensus 253 l~~~----d~~~~s~~K~~gp--~G~g~l~v~~~~~~~~~~~----~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~ 322 (430)
.+.+ |+++ ++|.++. ..+|++++++++++.+... .++. .+. ..+.|...++++.++|+.
T Consensus 276 ~~~~~~~pdi~t--~sK~l~gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~--------~~~-t~~~~~~~~aaa~aal~~ 344 (460)
T 3gju_A 276 SDHYGIKPDLIT--IAKGLTSAYAPLSGVIVADRVWQVLVQGSDKLGSLG--------HGW-TYSAHPICVAAGVANLEL 344 (460)
T ss_dssp HHHHTCCCSEEE--ECGGGTTTSSCCEEEEEEHHHHHHHHHHHHHHCSCS--------CCC-TTTTCHHHHHHHHHHHHH
T ss_pred HhhcCCCCCeee--eehhhcCCCCCeEEEEECHHHHHHHhcccccccccc--------cCC-CCCCCHHHHHHHHHHHHH
Confidence 2222 4554 5699954 3479999999988764210 0000 011 135567788888899987
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc-----------hhHHHHHHHHHcCCe
Q 043610 323 LLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD-----------LEAEFVKEAAKEKMV 391 (430)
Q Consensus 323 l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~-----------~~~~~~~~L~~~Gi~ 391 (430)
+.++.-++.+.+....+++.+.+.+.+...+..+. ... ..+.+.+.+.. ...++.+.|.++||+
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~----~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 419 (460)
T 3gju_A 345 IDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEVR----GDG-MLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVI 419 (460)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEE----EET-TEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEE
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe----eee-EEEEEEEccCccccccccchHHHHHHHHHHHHHCCeE
Confidence 76432245555555556666666555432222211 012 23445543211 122688888899998
Q ss_pred ecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 392 QLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 392 ~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
+.++. ..+.+||++....+++|+++++++|++++++
T Consensus 420 v~~~~-~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 455 (460)
T 3gju_A 420 GRAMP-QGDILGFAPPLCLTREQADIVVSKTADAVKS 455 (460)
T ss_dssp CEECS-SSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EecCC-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 87643 2368999998889999999999999998764
No 208
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.76 E-value=3.2e-17 Score=167.40 Aligned_cols=325 Identities=11% Similarity=0.019 Sum_probs=202.6
Q ss_pred CceeecCC--C---CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610 70 RVFNFAAG--P---ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT 144 (430)
Q Consensus 70 ~~~l~~~g--p---~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT 144 (430)
+.++|..| . +-.+|.|++++.+.+.+.... + .+... .+...++++.|+++++...+ +|+|+ +|++
T Consensus 76 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~-~----~~~~~---~~~~~~L~e~la~~~~~~~~-~v~~~-~sGs 145 (457)
T 3tfu_A 76 EVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHV-M----FGGLT---HEPAARLAKLLVDITPAGLD-TVFFS-DSGS 145 (457)
T ss_dssp EEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSCC-C----SSSEE---CHHHHHHHHHHHHHSSTTEE-EEEEE-SSHH
T ss_pred EEEECCCcHhhhccCCCCHHHHHHHHHHHHhccCc-c----ccccC---CHHHHHHHHHHHHhCCCCcC-EEEEe-CcHH
Confidence 45555554 2 224889999999988653110 0 01111 13455888999999987654 67665 7899
Q ss_pred HHHHHHHhhcCC-------CCC-cEEEEeCChhHHHHHHHHHHh--------------C-CceEEecCCCCcCCCCCCcc
Q 043610 145 TQFAAVPLNLCT-------PND-PVDYIVTGSWGDKAFKEAQKF--------------C-NPQVIWSGKAEKYTKIPNFD 201 (430)
Q Consensus 145 ~a~~~~~~sl~~-------~gd-~vl~~~~g~~~~~~~~~a~~~--------------g-~~~~v~~~~~~~~g~~~d~~ 201 (430)
+|++.++..+.. +|+ +|++.+.++.+.... +... . ....++.... .++ ..|++
T Consensus 146 eA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~-~~d~~ 221 (457)
T 3tfu_A 146 VSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFL--AMSICDPHGGMHSLWTDVLAAQVFAPQVPR-DYD-PAYSA 221 (457)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHH--HHTTSCCC----------CCCCEEECCCCS-SCC-HHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHH--hhcccCCcccccccccCCCCCceEecCCCc-ccC-HHHHH
Confidence 999998877643 555 566566555443211 1111 1 2333332110 111 12556
Q ss_pred ccc--cC---CCccEEEEee-cCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccccc----cEEEe
Q 043610 202 ALE--QN---PDAKYLHICA-NETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTRF----GVIYA 261 (430)
Q Consensus 202 ~l~--i~---~~~~lv~i~~-~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~----d~~~~ 261 (430)
+|+ ++ +++++|++.. +++++|++.+ +|.++ +++|+++|+|++|. +|.. .+.++.+ |++
T Consensus 222 ~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdii-- 299 (457)
T 3tfu_A 222 AFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIM-- 299 (457)
T ss_dssp HHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--
T ss_pred HHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEE--
Confidence 666 44 6788888888 8899999876 24444 58999999999986 5422 1212222 555
Q ss_pred CCCccccC--CccEEEEEcHHHHhccCC--CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 043610 262 GAQKNVGP--SGVTIVIVRKDLLGNAQD--KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNR 337 (430)
Q Consensus 262 s~~K~~gp--~G~g~l~v~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~ 337 (430)
+++|.+|. ..+|++++++++++.+.. ..++.. +.+ ++.|...++++.++|+.+.+ +.+.++.+
T Consensus 300 t~sK~l~gG~~~lG~v~~~~~i~~~~~~~~~~~~~~--------~~t-~~~n~~a~aaa~aaL~~~~~----~~~~~~~~ 366 (457)
T 3tfu_A 300 CVGKALTGGYLSLAATLCTADVAHTISAGAAGALMH--------GPT-FMANPLACAVSVASVELLLG----QDWRTRIT 366 (457)
T ss_dssp EECGGGGTTSSCCEEEEEEHHHHHHHHHSSSCSCCC--------CCT-TTTCHHHHHHHHHHHHHHHT----SCHHHHHH
T ss_pred EEChhhhCCCcceEEEEEcHHHHHHhhccCCCceeE--------ecC-CCcCHHHHHHHHHHHHHHhh----hHHHHHHH
Confidence 66799953 358999999998876521 011111 112 35577788888889987753 24667777
Q ss_pred HHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHH
Q 043610 338 KKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEK 417 (430)
Q Consensus 338 ~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ 417 (430)
++.+++++.|.+..++..+. +-.... ..+.+.+++.....++.+.|.++||++.+. .+.+||++....+++|+++
T Consensus 367 ~~~~~l~~~L~~l~~~~~v~-~vr~~G-~~~~i~l~~~~~~~~~~~~l~~~Gv~v~~~---~~~lRi~p~~~~t~eei~~ 441 (457)
T 3tfu_A 367 ELAAGLTAGLDTARALPAVT-DVRVCG-AIGVIECDRPVDLAVATPAALDRGVWLRPF---RNLVYAMPPYICTPAEITQ 441 (457)
T ss_dssp HHHHHHHHHHGGGGGSTTEE-EEEECS-SCEEEEESSCCCHHHHHHHHHHTTEECCCB---TTEEEECCCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCee-eeecCC-eEEEEEECCcccHHHHHHHHHHCCeEEEec---CCEEEEECCCCCCHHHHHH
Confidence 88888888887632111110 000122 345566664222237999999999998752 2479999988889999999
Q ss_pred HHHHHHHHHHh
Q 043610 418 LVAFMKDFQAK 428 (430)
Q Consensus 418 ll~~L~~~~~~ 428 (430)
++++|++++++
T Consensus 442 ~l~~L~~~l~~ 452 (457)
T 3tfu_A 442 ITSAMVEVARL 452 (457)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998865
No 209
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.75 E-value=8.2e-17 Score=164.09 Aligned_cols=328 Identities=9% Similarity=0.009 Sum_probs=188.2
Q ss_pred CCCCceeecCC--CC---CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610 67 QEDRVFNFAAG--PA---NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG 141 (430)
Q Consensus 67 ~~~~~~l~~~g--p~---~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ 141 (430)
..++.+.|..| .. .-++.|++++.+.+.+....+ ..... .+...++++.|+++++.+...+|+|+ +
T Consensus 62 ~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~-----~~~~~---~~~~~~la~~l~~~~~~~~~~~v~~~-~ 132 (453)
T 4ffc_A 62 DGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTHTC-----FMVTP---YEQYVQVAELLNALTPGDHDKRTALF-N 132 (453)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCT-----TTTSC---CHHHHHHHHHHHHHSSCSSCEEEEEE-S
T ss_pred CCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhccccc-----cCcCC---CHHHHHHHHHHHHhCCCCCCcEEEEe-C
Confidence 34445556554 22 248999999999886531111 01111 13445788889999886432267765 8
Q ss_pred cHHHHHHHHHhhcC--CCCCcEEEEeCChhHHHHHHHHHHh-C--------------CceEEecCCC--CcCCCC-----
Q 043610 142 GATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKF-C--------------NPQVIWSGKA--EKYTKI----- 197 (430)
Q Consensus 142 gaT~a~~~~~~sl~--~~gd~vl~~~~g~~~~~~~~~a~~~-g--------------~~~~v~~~~~--~~~g~~----- 197 (430)
|||+|++.++.... ..+++|++...++.+... .+... + .+..++...+ .++|..
T Consensus 133 sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 210 (453)
T 4ffc_A 133 SGAEAVENAIKVARLATGRPAVVAFDNAYHGRTN--LTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAA 210 (453)
T ss_dssp SHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSH--HHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHH
T ss_pred cHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcch--HHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHH
Confidence 99999999886553 235677776666555321 11111 1 2233333210 011100
Q ss_pred -CCccccc--cCCCc-cEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccccc----cEE
Q 043610 198 -PNFDALE--QNPDA-KYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTRF----GVI 259 (430)
Q Consensus 198 -~d~~~l~--i~~~~-~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~----d~~ 259 (430)
.+.++++ +.++. .+|++..+++..|++.+ +|.++ +++|+++|+|++|+ +|.. ....+.+ |++
T Consensus 211 ~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~ 290 (453)
T 4ffc_A 211 RRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIV 290 (453)
T ss_dssp HHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE
T ss_pred HHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchH
Confidence 0013343 34444 44444444445566655 24444 58999999999986 5422 1111212 444
Q ss_pred EeCCCccccC-CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 043610 260 YAGAQKNVGP-SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRK 338 (430)
Q Consensus 260 ~~s~~K~~gp-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~ 338 (430)
++.|.+|+ ..+|++++++++++.+.+.. .+.+ ++.|...+.++.++|+.+.+. .+.++.++
T Consensus 291 --t~sK~~~~G~~~G~~~~~~~i~~~~~~~~-----------~~~t-~~~~~~~~aaa~aal~~~~~~----~~~~~~~~ 352 (453)
T 4ffc_A 291 --TMAKGIAGGMPLSAVTGRAELMDAVYAGG-----------LGGT-YGGNPVTCAAAVAALGVMREL----DLPARARA 352 (453)
T ss_dssp --EECGGGGTTSSCEEEEEEHHHHTTSCTTS-----------SCCS-SSSCHHHHHHHHHHHHHHHHT----THHHHHHH
T ss_pred --hhhhhhcCCcCeEEEEECHHHHhhhcccC-----------cCCC-CCcCHHHHHHHHHHHHHhhhh----hHHHHHHH
Confidence 45699964 23899999999887653211 1112 345677888888889877542 34445555
Q ss_pred HHHHHHHHHHcc----CCceecCCCCCCCccceEEEEcCC------Cc-hhHHHHHHHHHcCCeecCCCCCCCeeEEeec
Q 043610 339 KAELLYNVIDGS----NGFYKCPVEKSVRSFMNVPFTLEK------SD-LEAEFVKEAAKEKMVQLKGHRSVGGMRASIY 407 (430)
Q Consensus 339 l~~~l~~~l~~~----~G~~~~~~~~~~rs~~iv~f~~~~------~~-~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~ 407 (430)
+.+++++.|.+. .++..+. ... ..+.+.+.+ .. ...++.+.|.++||.+.++....+.+||++.
T Consensus 353 ~~~~l~~~l~~~~~~~~~~~~~~----~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~ 427 (453)
T 4ffc_A 353 IEASVTSRLSALAEEVDIIGEVR----GRG-AMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGTFGNVIRLLPP 427 (453)
T ss_dssp HHHHHHHHHHHHHHHCSSEEEEE----EET-TEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECTTSCEEEECCC
T ss_pred HHHHHHHHHHHHHhhCCCeEEEE----eec-eEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECC
Confidence 555555555432 2222111 112 234455421 11 1226888889999998764333457999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHh
Q 043610 408 NAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 408 ~~~t~edv~~ll~~L~~~~~~ 428 (430)
..++++|++++++.|++++++
T Consensus 428 ~~~t~e~i~~~l~~l~~~l~~ 448 (453)
T 4ffc_A 428 LVIGDDLLDEGITALSDIIRA 448 (453)
T ss_dssp TTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 889999999999999998865
No 210
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.75 E-value=3.3e-16 Score=159.21 Aligned_cols=318 Identities=10% Similarity=-0.018 Sum_probs=181.8
Q ss_pred CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC----
Q 043610 81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT---- 156 (430)
Q Consensus 81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~---- 156 (430)
.++.|++++.+.+.+.. ... ...... +...++++.|+++++...+ +|+|+ +||++|++.++..+..
T Consensus 61 ~~p~v~~A~~~~~~~~~-~~~----~~~~~~---~~~~~la~~l~~~~~~~~~-~v~~~-~sGseA~~~al~~~~~~~~~ 130 (448)
T 3dod_A 61 RKKELDDAIKKQLGKIA-HST----LLGMTN---VPATQLAETLIDISPKKLT-RVFYS-DSGAEAMEIALKMAFQYWKN 130 (448)
T ss_dssp SCHHHHHHHHHHHTTCS-CCC----CSSSEE---HHHHHHHHHHHHHSCTTEE-EEEEE-SSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc-Ccc----ccccCC---HHHHHHHHHHHHhCCCCCC-EEEEe-CchHHHHHHHHHHHHHHHHh
Confidence 47999999999886421 100 011112 2345778888999875544 67765 7899999998877643
Q ss_pred CC----CcEEEEeCChhHHHHHHHHHHh-C-------------CceEEecCCCCcCCC---------CCCccccc--cC-
Q 043610 157 PN----DPVDYIVTGSWGDKAFKEAQKF-C-------------NPQVIWSGKAEKYTK---------IPNFDALE--QN- 206 (430)
Q Consensus 157 ~g----d~vl~~~~g~~~~~~~~~a~~~-g-------------~~~~v~~~~~~~~g~---------~~d~~~l~--i~- 206 (430)
+| |+|++...++.+.... +... + ....++... .+.. ..|+++|+ +.
T Consensus 131 ~G~~~~~~vi~~~~~yhg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~le~~l~~ 206 (448)
T 3dod_A 131 IGKPEKQKFIAMKNGYHGDTIG--AVSVGSIELFHHVYGPLMFESYKAPIPY--VYRSESGDPDECRDQCLRELAQLLEE 206 (448)
T ss_dssp TTCTTCCEEEEEC-------------------------------CEEECCCC--CTTSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hCCCCCCEEEEECCCCCCccHH--HHHhcCCccccccccCCCCCceEeCCCc--cccCCccchhhhhHHHHHHHHHHHHh
Confidence 44 8888877766554211 1111 1 112222211 0100 01245565 43
Q ss_pred --CCccEEEEeecC-CCccccCC--C----Cccc-cCCCcEEEEeccCc-CCC--Cccccccc----cEEEeCCCccccC
Q 043610 207 --PDAKYLHICANE-TIHGVEFK--E----YPSA-KNSTGILVADMSSN-FCS--KPVDVTRF----GVIYAGAQKNVGP 269 (430)
Q Consensus 207 --~~~~lv~i~~~~-t~tG~~~p--e----i~~~-~~~g~~lvvD~a~s-~G~--~~idl~~~----d~~~~s~~K~~gp 269 (430)
+++++|++..+. +++|.+.+ + |.++ +++|+++|+|++|+ +|. ..+-.+.+ |+++ ++|.+|.
T Consensus 207 ~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t--~sK~l~~ 284 (448)
T 3dod_A 207 HHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMA--AGKGITG 284 (448)
T ss_dssp HGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEE--ECGGGGT
T ss_pred CCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEE--ecccccC
Confidence 456677776666 88887765 2 4444 58999999999987 542 12222222 4554 5699963
Q ss_pred --CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Q 043610 270 --SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVI 347 (430)
Q Consensus 270 --~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l 347 (430)
..+|++++++++++.+.+... .... ...+.+ ++.|...+.++.++|+.+.++ .+.++.+++.+++++.|
T Consensus 285 G~~~ig~v~~~~~~~~~~~~~~~---~~~~-~~~~~t-~~~~~~~~aaa~aal~~~~~~----~~~~~~~~~~~~~~~~l 355 (448)
T 3dod_A 285 GYLPIAVTFATEDIYKAFYDDYE---NLKT-FFHGHS-YTGNQLGCAVALENLALFESE----NIVEQVAEKSKKLHFLL 355 (448)
T ss_dssp TSSCCEEEEEEHHHHHTTCSCGG---GCCC-CCCCCT-TTTCHHHHHHHHHHHHHHHHT----THHHHHHHHHHHHHHHH
T ss_pred CcCceEEEEECHHHHHHhhhccc---cCCc-ccccCC-CCcCHHHHHHHHHHHHHHhcc----cHHHHHHHHHHHHHHHH
Confidence 246999999999887543100 0000 000111 345677888888899877542 34455555555555555
Q ss_pred HccCCceecCCCCCCCccceEEEEcCCCch-----------hHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHH
Q 043610 348 DGSNGFYKCPVEKSVRSFMNVPFTLEKSDL-----------EAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVE 416 (430)
Q Consensus 348 ~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~-----------~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~ 416 (430)
.+..++..+. ...... ..+.+.+++... ..++.+.|.++||.+.++. +.+||++...++++|++
T Consensus 356 ~~l~~~~~~~-~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~---~~iRi~~~~~~t~e~i~ 430 (448)
T 3dod_A 356 QDLHALPHVG-DIRQLG-FMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLG---DVIAFLPPLASTAEELS 430 (448)
T ss_dssp HHHTTSTTEE-EEEEET-TEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEET---TEEEECCCTTCCHHHHH
T ss_pred HHHhcCCCeE-EEEeee-EEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEeccC---CEEEEECCCCCCHHHHH
Confidence 4311111110 000112 345555543111 1368888989999987642 57999998889999999
Q ss_pred HHHHHHHHHHHh
Q 043610 417 KLVAFMKDFQAK 428 (430)
Q Consensus 417 ~ll~~L~~~~~~ 428 (430)
++++.|++++++
T Consensus 431 ~~l~~l~~~l~~ 442 (448)
T 3dod_A 431 EMVAIMKQAIHE 442 (448)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 211
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.74 E-value=8.9e-17 Score=162.49 Aligned_cols=321 Identities=9% Similarity=-0.005 Sum_probs=190.2
Q ss_pred CCCCceeecCCCC-----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610 67 QEDRVFNFAAGPA-----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG 141 (430)
Q Consensus 67 ~~~~~~l~~~gp~-----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ 141 (430)
..++.++|..|-. ..+|.|++++.+.+.+.... .+.. ....++++.|+++++ ..+ +++|+ +
T Consensus 53 ~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--------~~~~---~~~~~l~~~la~~~~-~~~-~v~~~-~ 118 (434)
T 3l44_A 53 DGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLY--------GTPT---ALEVKFAKMLKEAMP-ALD-KVRFV-N 118 (434)
T ss_dssp TCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCC--------SSCC---HHHHHHHHHHHHHCT-TCS-EEEEE-S
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcCC--------CCCC---HHHHHHHHHHHHhCC-CCC-EEEEe-C
Confidence 3444555555431 24899999999988652110 1111 233467778888887 444 77775 7
Q ss_pred cHHHHHHHHHhhcCC--CCCcEEEEeCChhHHHHHHHHHHh-C-CceEEecCCCCcCCC------------CCCccccc-
Q 043610 142 GATTQFAAVPLNLCT--PNDPVDYIVTGSWGDKAFKEAQKF-C-NPQVIWSGKAEKYTK------------IPNFDALE- 204 (430)
Q Consensus 142 gaT~a~~~~~~sl~~--~gd~vl~~~~g~~~~~~~~~a~~~-g-~~~~v~~~~~~~~g~------------~~d~~~l~- 204 (430)
|+|++++.++..+.. ++++|++...++.+... .+... | ......... ..+. ..|+++++
T Consensus 119 sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~--~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~ 194 (434)
T 3l44_A 119 SGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSD--LVLVAAGSGPSTLGTPD--SAGVPQSIAQEVITVPFNNVETLKE 194 (434)
T ss_dssp SHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSG--GGGBC-------CCCBS--STTCCHHHHTTEEEECTTCHHHHHH
T ss_pred chHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcH--HHHhhcCCcccccCCCC--cCCCCCcCCCceEecCcccHHHHHH
Confidence 899999998876543 67888877766544211 11111 1 111110000 0110 01566665
Q ss_pred -cC---CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc---CCCCc-ccccc--ccEEEeCCCccc
Q 043610 205 -QN---PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN---FCSKP-VDVTR--FGVIYAGAQKNV 267 (430)
Q Consensus 205 -i~---~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s---~G~~~-idl~~--~d~~~~s~~K~~ 267 (430)
+. +++++|++..+++++|.+.+ +|.++ +++|+++|+|++|. .|... ++... .|++ +++|.+
T Consensus 195 ~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~g~~~~~~~~~~~~di~--t~sK~~ 272 (434)
T 3l44_A 195 ALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFMYGGAQDLLGVTPDLT--ALGKVI 272 (434)
T ss_dssp HHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSSSSCHHHHHTCCCSEE--EEEGGG
T ss_pred HHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceeccccHHHHHcCCCCCee--ehhhhh
Confidence 43 56778888877888888875 24444 58999999999987 22111 11111 1444 567999
Q ss_pred c-CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 043610 268 G-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNV 346 (430)
Q Consensus 268 g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~ 346 (430)
| ...+|++++++++++.+.+..+.+. +. .++.|...+.++.++|+.+.+ ++..++.+++++++++.
T Consensus 273 ~~G~~iG~~~~~~~i~~~~~~~~~~~~--------~~-t~~~~~~a~aaa~aal~~~~~----~~~~~~~~~~~~~l~~~ 339 (434)
T 3l44_A 273 GGGLPIGAYGGKKEIMEQVAPLGPAYQ--------AG-TMAGNPASMASGIACLEVLQQ----EGLYEKLDELGATLEKG 339 (434)
T ss_dssp GTTSSCEEEEECHHHHTTBTTTSSBCC--------CC-TTTTCHHHHHHHHHHHHHHTS----TTHHHHHHHHHHHHHHH
T ss_pred cCCcCeeeEEEcHHHHHhhccCCCccc--------CC-CCCcCHHHHHHHHHHHHHHHc----ccHHHHHHHHHHHHHHH
Confidence 6 3348999999999887643221111 11 135677788888888987642 35566667777777777
Q ss_pred HHcc---CCceecCCCCCCCccceEEEEcCCC------------chh-HHHHHHHHHcCCeecCCCCCCCeeEEeecCCC
Q 043610 347 IDGS---NGFYKCPVEKSVRSFMNVPFTLEKS------------DLE-AEFVKEAAKEKMVQLKGHRSVGGMRASIYNAM 410 (430)
Q Consensus 347 l~~~---~G~~~~~~~~~~rs~~iv~f~~~~~------------~~~-~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~ 410 (430)
|.+. .++... .. .....+.+.+.+. ... .++.+.|.++||.+.++. .+.+|+++ .+
T Consensus 340 L~~~~~~~~~~~~---~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~rl~~--~~ 411 (434)
T 3l44_A 340 ILEQAAKHNIDIT---LN-RLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSK--YEAWFLTT--EH 411 (434)
T ss_dssp HHHHHHHTTCCEE---EE-EETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSST--TCCEECCT--TC
T ss_pred HHHHHHhCCCCEE---EE-eeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecC--CCcEEEec--cc
Confidence 7652 222111 00 1123455554211 111 357888888999987643 24688864 56
Q ss_pred CHHHHHHHHHHHHHHHHh
Q 043610 411 PLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 411 t~edv~~ll~~L~~~~~~ 428 (430)
+++|+++++++|++++++
T Consensus 412 t~e~i~~~l~~l~~~l~~ 429 (434)
T 3l44_A 412 TKEDIEYTIEAVGRAFAA 429 (434)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999998764
No 212
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.74 E-value=7.8e-17 Score=164.13 Aligned_cols=327 Identities=9% Similarity=0.011 Sum_probs=188.4
Q ss_pred CCCceeecCC--CC---CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610 68 EDRVFNFAAG--PA---NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG 142 (430)
Q Consensus 68 ~~~~~l~~~g--p~---~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g 142 (430)
.++.+.|..| .. .-++.|++++.+.+.+... .+ ..... .+...++++.|+++++.+..++|+|+ +|
T Consensus 60 g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~--~~---~~~~~---~~~~~~la~~l~~~~~~~~~~~v~~~-~s 130 (451)
T 3oks_A 60 GNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTH--TC---FMVTP---YEGYVAVCEQLNRLTPVRGDKRSALF-NS 130 (451)
T ss_dssp SCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTCSC--CT---TTTSC---CHHHHHHHHHHHHHSSCCSSEEEEEE-SS
T ss_pred CCEEEEcCCCccccccCCCCHHHHHHHHHHHHhccc--cc---CCccC---CHHHHHHHHHHHHhCCcCCCCEEEEe-Cc
Confidence 3445555554 32 2389999999998864211 10 11111 13445778888898875432267765 89
Q ss_pred HHHHHHHHHhhcCC--CCCcEEEEeCChhHHHHHHHHHHh-C--------------CceEEecCCC--CcC-CC------
Q 043610 143 ATTQFAAVPLNLCT--PNDPVDYIVTGSWGDKAFKEAQKF-C--------------NPQVIWSGKA--EKY-TK------ 196 (430)
Q Consensus 143 aT~a~~~~~~sl~~--~gd~vl~~~~g~~~~~~~~~a~~~-g--------------~~~~v~~~~~--~~~-g~------ 196 (430)
||+|++.++..... .+++|++...++.+.... +... + .+..++...+ .++ |.
T Consensus 131 GseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 208 (451)
T 3oks_A 131 GSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNL--TMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDG 208 (451)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHH--HHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCH
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHH--HHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhh
Confidence 99999998866532 346677666665553221 1111 1 2233333210 000 00
Q ss_pred CCCcccc----c--cCC-CccEEEEeecCCCccccCC--C----Cccc-cCCCcEEEEeccCc-CCCC--ccccccc---
Q 043610 197 IPNFDAL----E--QNP-DAKYLHICANETIHGVEFK--E----YPSA-KNSTGILVADMSSN-FCSK--PVDVTRF--- 256 (430)
Q Consensus 197 ~~d~~~l----~--i~~-~~~lv~i~~~~t~tG~~~p--e----i~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~--- 256 (430)
..+++.+ + +.+ ++++|++..+++..|++.+ + |.++ +++|+++|+|++|+ +|.. ....+.+
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~ 288 (451)
T 3oks_A 209 ELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGID 288 (451)
T ss_dssp HHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCC
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCC
Confidence 0012222 1 233 4555666555666677665 2 4443 58999999999987 5421 1222222
Q ss_pred -cEEEeCCCccccC-CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHH
Q 043610 257 -GVIYAGAQKNVGP-SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEK 334 (430)
Q Consensus 257 -d~~~~s~~K~~gp-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~ 334 (430)
|++ +++|.+|+ ..+|++++++++++.+.+.. .+.+ ++.|...++++.++|+.+.+. .+.+
T Consensus 289 pdi~--t~sK~l~~G~~iG~v~~~~~~~~~~~~~~-----------~~~t-~~~~~~~~aaa~aal~~~~~~----~~~~ 350 (451)
T 3oks_A 289 PDLI--VTAKGIAGGLPLSAVTGRAEIMDSPHVSG-----------LGGT-YGGNPIACAAALATIETIESE----GLVA 350 (451)
T ss_dssp CSEE--EECGGGGTTSSCEEEEEEHHHHTCSCTTS-----------BCCS-SSSCHHHHHHHHHHHHHHHHT----THHH
T ss_pred CCee--eehhhhhCCcceEEEEECHHHHhhhcCCC-----------cCCC-CCCCHHHHHHHHHHHHHHhhh----hHHH
Confidence 455 56799964 23799999999987653211 1112 345677888888899877642 3445
Q ss_pred HHHHHHHHHHHHHHcc----CCceecCCCCCCCccceEEEEcCC------Cc-hhHHHHHHHHHcCCeecCCCCCCCeeE
Q 043610 335 MNRKKAELLYNVIDGS----NGFYKCPVEKSVRSFMNVPFTLEK------SD-LEAEFVKEAAKEKMVQLKGHRSVGGMR 403 (430)
Q Consensus 335 ~~~~l~~~l~~~l~~~----~G~~~~~~~~~~rs~~iv~f~~~~------~~-~~~~~~~~L~~~Gi~~~~g~~~~g~iR 403 (430)
+.+++.+++++.|.+. ..+..+. ... ..+.+.+.+ .. ...++.+.|.++||.+.++....+.+|
T Consensus 351 ~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iR 425 (451)
T 3oks_A 351 RAQQIEKIMKDRLGRLQAEDDRIGDVR----GRG-AMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGTYGNVVR 425 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTEEEEE----EET-TEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeEEEE----Eee-EEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCCCCCEEE
Confidence 5555555555555542 2222111 112 244455421 11 122688889999999876433345799
Q ss_pred EeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 404 ASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 404 is~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
|++...++++|++++++.|++++++
T Consensus 426 i~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 426 FLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred EECCCCCCHHHHHHHHHHHHHHHhh
Confidence 9999889999999999999998864
No 213
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.74 E-value=5.1e-17 Score=165.78 Aligned_cols=331 Identities=12% Similarity=0.003 Sum_probs=192.0
Q ss_pred CCCceeecCC--C---CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610 68 EDRVFNFAAG--P---ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG 142 (430)
Q Consensus 68 ~~~~~l~~~g--p---~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g 142 (430)
.++.+.|..| . +..++.|++++.+.+.+... ..+ ...... +..+++++.|+++++.+.+ +|+|+ +|
T Consensus 49 g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~-~~~---~~~~~~---~~~~~la~~l~~~~~~~~~-~v~~~-~g 119 (459)
T 4a6r_A 49 GNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPF-YNT---FFKTTH---PAVVELSSLLAEVTPAGFD-RVFYT-NS 119 (459)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSC-CCT---TSSSCC---HHHHHHHHHHHHHSCTTCC-EEEEE-SS
T ss_pred CCEEEECCCchhcccCCCCCHHHHHHHHHHHHhccc-ccc---ccccCC---HHHHHHHHHHHHhCCCCCC-EEEEe-Cc
Confidence 3445555554 2 22478999999998865321 111 111112 3445788899999987665 77775 78
Q ss_pred HHHHHHHHHhhcCC--------CCCcEEEEeCChhHHHHHHHHHHh-CC-------------ceEEecCCCCcCCCCCC-
Q 043610 143 ATTQFAAVPLNLCT--------PNDPVDYIVTGSWGDKAFKEAQKF-CN-------------PQVIWSGKAEKYTKIPN- 199 (430)
Q Consensus 143 aT~a~~~~~~sl~~--------~gd~vl~~~~g~~~~~~~~~a~~~-g~-------------~~~v~~~~~~~~g~~~d- 199 (430)
+++|++.++..+.. ++++|++...++.+.... +... +. +..++....-..+...|
T Consensus 120 gseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~d~ 197 (459)
T 4a6r_A 120 GSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIG--GASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKDMTP 197 (459)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHH--HHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTTCCH
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHH--HHhhcCChhhccccCCCCCCCEEeCCCccccCCcccCH
Confidence 99999998887653 467888777766554321 1122 21 12222110000000012
Q ss_pred -------ccccc--cC----CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccccc
Q 043610 200 -------FDALE--QN----PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTRF 256 (430)
Q Consensus 200 -------~~~l~--i~----~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~ 256 (430)
+++|+ +. +++++|++..+++.+|.+.+ +|.++ +++|+++|+|++|+ +|-. ..-.+.+
T Consensus 198 ~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~ 277 (459)
T 4a6r_A 198 DEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHF 277 (459)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhc
Confidence 45555 32 45667777667777788765 24454 58999999999987 5432 1112222
Q ss_pred ----cEEEeCCCccccC--CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHH
Q 043610 257 ----GVIYAGAQKNVGP--SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLN 330 (430)
Q Consensus 257 ----d~~~~s~~K~~gp--~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~ 330 (430)
|+++ ++|.++. ..+|++++++++++.+....+.... .+ ++.|..+++++.++|+.+.++.-++
T Consensus 278 ~~~pdi~t--~sK~l~gg~~~lg~v~~~~~i~~~~~~~~~~~~~--------~t-~~~~~~~~aaa~aal~~~~~~~~~~ 346 (459)
T 4a6r_A 278 GFQPDLFT--AAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHG--------FT-YSGHPVCAAVAHANVAALRDEGIVQ 346 (459)
T ss_dssp TCCCSEEE--ECGGGGTTSSCCEEEEECHHHHHHHHHHCTTHHH--------HH-HCSCHHHHHHHHHHHHHHHHTCHHH
T ss_pred CCCCCeee--hhhhhcCCCCCccceeeCHHHHHHhhcCCCcccC--------CC-CCCCHHHHHHHHHHHHHHhcchHHH
Confidence 5554 4699953 4589999999987764310011100 01 2456677888888998775432223
Q ss_pred HHH-HHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc-----------hhHHHHHHHHHcCCeecCCCCC
Q 043610 331 EVE-KMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD-----------LEAEFVKEAAKEKMVQLKGHRS 398 (430)
Q Consensus 331 ~v~-~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~-----------~~~~~~~~L~~~Gi~~~~g~~~ 398 (430)
.+. ++...+++.+++.|.+..++..+. ... ..+.+.+.+.. ...++.+.|.++||++.++.
T Consensus 347 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~----~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-- 419 (459)
T 4a6r_A 347 RVKDDIGPYMQKRWRETFSRFEHVDDVR----GVG-MVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACG-- 419 (459)
T ss_dssp HHHHTHHHHHHHHHHHHHTTCTTEEEEE----EET-TEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEET--
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEE----EEE-EEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecCC--
Confidence 333 344444444444444322222211 112 23445443210 12368888889999987642
Q ss_pred CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 399 VGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 399 ~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
+.+||++....+++|+++++++|++++++
T Consensus 420 -~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 448 (459)
T 4a6r_A 420 -DHIVSAPPLVMTRAEVDEMLAVAERCLEE 448 (459)
T ss_dssp -TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 58999999889999999999999988764
No 214
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.74 E-value=5.5e-17 Score=163.78 Aligned_cols=246 Identities=13% Similarity=0.077 Sum_probs=165.0
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEE-eCcHHHHHHHHHhhcCCCCCcEEEEe-CChhHHH-HH--------HHHHHhC-Cce
Q 043610 117 IEKAESDLRALLNIPQEYSVLFL-QGGATTQFAAVPLNLCTPNDPVDYIV-TGSWGDK-AF--------KEAQKFC-NPQ 184 (430)
Q Consensus 117 ~~~~r~~la~l~g~~~~~~vv~~-~~gaT~a~~~~~~sl~~~gd~vl~~~-~g~~~~~-~~--------~~a~~~g-~~~ 184 (430)
.+++++.+++++|++. .+++. ++|||+|+..++.++++|||+|++.. ..+.+.. +. ..++..| +++
T Consensus 76 ~~~Le~~lA~l~g~e~--alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~ 153 (427)
T 3hvy_A 76 RDSLDRVYANIFNTES--AFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYK 153 (427)
T ss_dssp HHHHHHHHHHHHTCSE--EEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEE
T ss_pred HHHHHHHHHHHhCCCc--eEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEE
Confidence 6788899999999874 33320 36789999999999999999999766 4444432 11 2234457 666
Q ss_pred EEecCCCCcCCCCCCccccc--cC--CCccEEEEee----cCCCccccCC--CCccc-cC--CCcEEEEeccCcCCCC--
Q 043610 185 VIWSGKAEKYTKIPNFDALE--QN--PDAKYLHICA----NETIHGVEFK--EYPSA-KN--STGILVADMSSNFCSK-- 249 (430)
Q Consensus 185 ~v~~~~~~~~g~~~d~~~l~--i~--~~~~lv~i~~----~~t~tG~~~p--ei~~~-~~--~g~~lvvD~a~s~G~~-- 249 (430)
.++. + .+ .+|+++++ ++ +++|+|++++ ++|++|.+.| +|.++ ++ +|+++++|++++.+..
T Consensus 154 ~v~~-~---~~-~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~ 228 (427)
T 3hvy_A 154 MVDL-K---DG-KVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEEK 228 (427)
T ss_dssp ECCC-B---TT-BCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSS
T ss_pred EecC-C---CC-CcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccCC
Confidence 6655 2 23 47888887 66 8999999999 9999999988 78886 56 8999999999987762
Q ss_pred -ccccccccEEEeCCCccccC----CccEEEEEcHHHHhccCC--CCCccccccchhhcCCCCCCccHHHHHHHHHHHHH
Q 043610 250 -PVDVTRFGVIYAGAQKNVGP----SGVTIVIVRKDLLGNAQD--KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY 322 (430)
Q Consensus 250 -~idl~~~d~~~~s~~K~~gp----~G~g~l~v~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~ 322 (430)
|+++ ..|+++.|+||++|+ .| |+++.++++++.+.. ..+.. . .. ..++....+.+...++.
T Consensus 229 ~p~~~-gaDiv~~S~sK~lgg~g~~~G-G~i~~~~~li~~l~~~~~~~~~-g--------~~-~~~~~~~a~~~~~gl~~ 296 (427)
T 3hvy_A 229 EPTDV-GADIIAGSLIKNIGGGIATTG-GYIAGKEEYVTQATFRVTVPGI-G--------GE-CGSTFGVMRSLYEGLFM 296 (427)
T ss_dssp CGGGG-TCSEEEEETTSGGGTTTCCSC-EEEEECHHHHHHHHHHHSCTTT-G--------GG-CCCCTTCHHHHHHHHHH
T ss_pred CCccc-CCeEEEECCcccccccccceE-EEEEECHHHHHHHHHHhhcCCc-c--------cc-cCCCHHHHHHHHHhHhH
Confidence 3332 248999999999964 44 999999999887532 11100 0 00 01111112222233332
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHc
Q 043610 323 LLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKE 388 (430)
Q Consensus 323 l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~ 388 (430)
+..+.++..+.+.++.++|++ .|+++.+.....+...+++|.+.+.+.-.+|++.|...
T Consensus 297 ------~~~r~~~~~~~a~~la~~L~~-~g~~V~p~~~~~~~~li~~~~l~~~~~~~~f~~~l~~~ 355 (427)
T 3hvy_A 297 ------APHVTIEAVKGAVFCARIMEL-AGFDVLPKYNDKRTDIIQAIKFNDEKKLIDFIKGIQTA 355 (427)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHH-TTCEEESCTTSCCSSSEEEEECSSHHHHHHHHHHHHHT
T ss_pred ------HHHHHHHHHHHHHHHHHHHHh-CCCeecCCCCCCCceEEEEEeCCCHHHHHHHHHHhccc
Confidence 345777788888999999986 78887653222233347888886422112688888765
No 215
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.74 E-value=3.7e-17 Score=166.42 Aligned_cols=314 Identities=9% Similarity=0.009 Sum_probs=191.7
Q ss_pred CcHHHH-H-HHHH---HhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEeCcHHHHHHHHHhhc
Q 043610 81 LPEKVL-L-KAQS---ELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN-IPQEYSVLFLQGGATTQFAAVPLNL 154 (430)
Q Consensus 81 ~~~~V~-~-a~~~---~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g-~~~~~~vv~~~~gaT~a~~~~~~sl 154 (430)
.+|.|+ + ++.+ .+.+... .+ +.+.. +...++++.|+++++ .+.+ +|+|+ +|+++|++.++..+
T Consensus 71 ~~p~v~~~~A~~~~~~~~~~~~~--~~----~~~~~---~~~~~la~~la~~~~~~~~~-~v~~~-~~gseA~~~aik~a 139 (449)
T 2cjg_A 71 NPPALVDDREFHAELMQAALNKP--SN----SDVYS---VAMARFVETFARVLGDPALP-HLFFV-EGGALAVENALKAA 139 (449)
T ss_dssp SCHHHHTCHHHHHHHHHHHTCCC--CT----TTCCC---HHHHHHHHHHHHHHCCTTCC-EEEEE-SSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCC--CC----cccCC---HHHHHHHHHHHHhcCCCCCC-EEEEe-CchHHHHHHHHHHH
Confidence 488999 9 9998 5543211 11 01111 234577788999997 3444 77775 78999999887643
Q ss_pred C---C----------C-CCcEEEEeCChhHHHH--HHH-----HHHhC-C---ceEEecCCCCc-CCC-------CCCcc
Q 043610 155 C---T----------P-NDPVDYIVTGSWGDKA--FKE-----AQKFC-N---PQVIWSGKAEK-YTK-------IPNFD 201 (430)
Q Consensus 155 ~---~----------~-gd~vl~~~~g~~~~~~--~~~-----a~~~g-~---~~~v~~~~~~~-~g~-------~~d~~ 201 (430)
. + + ||+|++.+..+.+... ... ..+.+ . ..++....++. ... ..+++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 219 (449)
T 2cjg_A 140 FDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALR 219 (449)
T ss_dssp HHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHH
T ss_pred HHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHH
Confidence 2 2 2 8899887766544211 000 00111 1 11121111000 000 01223
Q ss_pred ccc--c---CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccc--c--ccEEEeC
Q 043610 202 ALE--Q---NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVT--R--FGVIYAG 262 (430)
Q Consensus 202 ~l~--i---~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~--~--~d~~~~s 262 (430)
+|+ + .+++++|++..+++++|.+.+ +|.++ +++|+++++|++|+ +|.. ...++ . .|++ +
T Consensus 220 ~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~--t 297 (449)
T 2cjg_A 220 QARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIV--A 297 (449)
T ss_dssp HHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--E
T ss_pred HHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEE--E
Confidence 365 4 368889888888889996544 34554 58999999999998 5432 11111 1 2555 4
Q ss_pred CCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610 263 AQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL 342 (430)
Q Consensus 263 ~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~ 342 (430)
++|++ | +|++++++++++.+.+. ++.. ...+.+ .+.|...+.++.++|+.+.+ +.+.++.++++++
T Consensus 298 ~sK~l-~--iG~~~~~~~~~~~l~~~---~~~~---~~~~~t-~~~n~~~~~aa~aal~~~~~----~~~~~~~~~~~~~ 363 (449)
T 2cjg_A 298 FGKKT-Q--VCGVMAGRRVDEVADNV---FAVP---SRLNST-WGGNLTDMVRARRILEVIEA----EGLFERAVQHGKY 363 (449)
T ss_dssp ECGGG-S--SEEEEECGGGGGSTTCT---TTST---TSSCCS-SSSCHHHHHHHHHHHHHHHH----HTHHHHHHHHHHH
T ss_pred ecCcc-c--EEEEEECHHHhhhhhhc---ccCC---cccccC-CCCCHHHHHHHHHHHHHHHh----ccHHHHHHHHHHH
Confidence 56999 4 78999999887754321 0000 001111 35677888888899987764 3467888888888
Q ss_pred HHHHHHcc----CC-ceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHH
Q 043610 343 LYNVIDGS----NG-FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEK 417 (430)
Q Consensus 343 l~~~l~~~----~G-~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ 417 (430)
+++.|.+. .+ +... . ..+ ..+.+.+++.....++.+.|.++||.+.++. .+.+|+++...++++|+++
T Consensus 364 l~~~L~~l~~~~~~~~~~~--~--~~g-~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g--~~~iRi~~~~~~t~e~i~~ 436 (449)
T 2cjg_A 364 LRARLDELAADFPAVVLDP--R--GRG-LMCAFSLPTTADRDELIRQLWQRAVIVLPAG--ADTVRFRPPLTVSTAEIDA 436 (449)
T ss_dssp HHHHHHHHHHHSTTTSEEE--E--EET-TEEEEECSSHHHHHHHHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHH
T ss_pred HHHHHHHHHhhCCCceeeE--e--ecc-EEEEEEECChHHHHHHHHHHHHCCeEEecCC--CCEEEEECCCCCCHHHHHH
Confidence 98888752 11 2111 1 123 3456777641122368888988999987642 3689999998999999999
Q ss_pred HHHHHHHHHHh
Q 043610 418 LVAFMKDFQAK 428 (430)
Q Consensus 418 ll~~L~~~~~~ 428 (430)
+++.|++++++
T Consensus 437 ~l~~l~~~l~~ 447 (449)
T 2cjg_A 437 AIAAVRSALPV 447 (449)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998765
No 216
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.74 E-value=5.3e-17 Score=172.61 Aligned_cols=290 Identities=11% Similarity=0.037 Sum_probs=192.9
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCc
Q 043610 115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEK 193 (430)
Q Consensus 115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~ 193 (430)
..+.++++.+|+++|++ ..+++++|++.|+.+++.++++|||+|++..+.|.+.. ..++..| ++++++...+ .
T Consensus 195 g~i~eaE~~lA~~fGa~---~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~--~~l~lsGa~pv~v~~~~~-~ 268 (715)
T 3n75_A 195 GPHKEAEQYIARVFNAD---RSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLT--HLMMMSDVTPIYFRPTRN-A 268 (715)
T ss_dssp THHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHH--HHHHHSCCEEEEECCCBC-T
T ss_pred HHHHHHHHHHHHHhCCC---CceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHH--HHHHHcCCEEEEEecccc-c
Confidence 34679999999999997 45666677789999999999999999999988888753 2344557 7777765432 3
Q ss_pred CCC--CC-----Cccccc--cC--CCcc---EEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCC--Cc----
Q 043610 194 YTK--IP-----NFDALE--QN--PDAK---YLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCS--KP---- 250 (430)
Q Consensus 194 ~g~--~~-----d~~~l~--i~--~~~~---lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~--~~---- 250 (430)
++- .+ |+++++ +. +++| +|+++++ |++|.+.| +|.++ +.+ .+++|++|+.+. .+
T Consensus 269 ~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~--~livDEAH~~~~~f~~~~~~ 345 (715)
T 3n75_A 269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK--SIHFDSAWVPYTNFSPIYEG 345 (715)
T ss_dssp TCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCS--EEEEECTTCTTGGGSGGGTT
T ss_pred cccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcC--cEEEccccccccccCCcccc
Confidence 431 12 677776 43 4555 8999988 99999999 77776 343 378999998653 11
Q ss_pred cc-cc---cccEE---EeCCCcccc-CCccEEEEEcHHHHh-ccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHH
Q 043610 251 VD-VT---RFGVI---YAGAQKNVG-PSGVTIVIVRKDLLG-NAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFE 321 (430)
Q Consensus 251 id-l~---~~d~~---~~s~~K~~g-p~G~g~l~v~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~ 321 (430)
.. +. ..|++ +.|+||+++ +++.|++.++++... ..+. ++. ....++|+++.++++..|++
T Consensus 346 ~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~~~~~~----~~~-------~~~STSpsy~~~AsldaA~~ 414 (715)
T 3n75_A 346 KCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNE----AYM-------MHTTTSPHYGIVASTETAAA 414 (715)
T ss_dssp SSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCHHHHHH----HHH-------HTSCSSCCHHHHHHHHHHHH
T ss_pred ccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhhHHHHHH----HHH-------hhcCCCchHHHHHHHHHHHH
Confidence 11 22 13654 899999995 888899998765211 0100 000 01235789999999999999
Q ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHccCC------ceecCCCC-----------------------C--CCccceEEE
Q 043610 322 YLLELGGLNEVEKMNRKKAELLYNVIDGSNG------FYKCPVEK-----------------------S--VRSFMNVPF 370 (430)
Q Consensus 322 ~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G------~~~~~~~~-----------------------~--~rs~~iv~f 370 (430)
++....| ++..++..+++++++++|.+..+ ++++..+. . ..-++-+++
T Consensus 415 ~~~~~~g-~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i 493 (715)
T 3n75_A 415 MMKGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTL 493 (715)
T ss_dssp HHSHHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEE
T ss_pred HHHhhcc-HHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEE
Confidence 8753223 55788899999999999986432 33332110 0 012344566
Q ss_pred EcCCC---------chhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610 371 TLEKS---------DLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 371 ~~~~~---------~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~ 427 (430)
..++. +... ++.+.|+++||.+-... ...|=+=+...++++++++|+++|.++.+
T Consensus 494 ~~~~~~~~G~~~~~Gi~g~~~~~~L~~~~I~~E~~d--~~~vl~l~s~g~~~~~~~~L~~aL~~~~~ 558 (715)
T 3n75_A 494 LTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTG--PYNLLFLFSIGIDKTKALSLLRALTDFKR 558 (715)
T ss_dssp ECSCBCTTSCBCSSCCCHHHHHHHHHHTTCCCSEEE--TTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred EcCCCCCCCccccCCCcHHHHHHHHHHCCCEEEecC--CCcEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 66531 3444 67778888899864311 12333334445699999999999998754
No 217
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.73 E-value=3.4e-17 Score=165.19 Aligned_cols=319 Identities=10% Similarity=0.007 Sum_probs=190.4
Q ss_pred CCCceeecCCC--C---CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610 68 EDRVFNFAAGP--A---NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG 142 (430)
Q Consensus 68 ~~~~~l~~~gp--~---~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g 142 (430)
.++.+.|..|- . ..++.|++++.+.+.+... . .+ ..+...++++.|+++++ ..+ +++++ +|
T Consensus 51 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~------~~---~~~~~~~la~~l~~~~~-~~~-~v~~~-~g 116 (427)
T 3fq8_A 51 GNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTS--F------GA---PCALENVLAEMVNDAVP-SIE-MVRFV-NS 116 (427)
T ss_dssp SCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSC--C------SS---CCHHHHHHHHHHHHHST-TCS-EEEEE-SS
T ss_pred CCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCCC--c------CC---CCHHHHHHHHHHHHhCC-CCC-EEEEe-CC
Confidence 34455565543 1 2489999999998864210 0 01 12345577888999987 444 77775 78
Q ss_pred HHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHHh-C-CceEEecCCCCcCCC------------CCCccccc--
Q 043610 143 ATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKF-C-NPQVIWSGKAEKYTK------------IPNFDALE-- 204 (430)
Q Consensus 143 aT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~~-g-~~~~v~~~~~~~~g~------------~~d~~~l~-- 204 (430)
++++++.++... ...+++|++...++.+... .+... + ....+.... ..+. .-|+++++
T Consensus 117 gsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~~ 192 (427)
T 3fq8_A 117 GTEACMAVLRIMRAYTGRDKIIKFEGCYHGHAD--MFLVKAGSGVATLGLPS--SPGVPKKTTANTLTTPYNDLEAVKAL 192 (427)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCG--GGCSSCCTHHHHHTCCS--CSSSCHHHHTTEEEEETTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCH--HHHHhcCCcccccCCCC--CCCCCCcccCceeecCCCCHHHHHHH
Confidence 999999887432 1335788877766554211 00000 1 000000000 0010 01566665
Q ss_pred cC---CCccEEEEeecCCCccccCC--C----Cccc-cCCCcEEEEeccCc-C--CCC-cccccc--ccEEEeCCCcccc
Q 043610 205 QN---PDAKYLHICANETIHGVEFK--E----YPSA-KNSTGILVADMSSN-F--CSK-PVDVTR--FGVIYAGAQKNVG 268 (430)
Q Consensus 205 i~---~~~~lv~i~~~~t~tG~~~p--e----i~~~-~~~g~~lvvD~a~s-~--G~~-~idl~~--~d~~~~s~~K~~g 268 (430)
+. +++++|++..+++++|.+.+ + |.++ +++|+++|+|++|+ + |.. ..+... .|+. +++|.+|
T Consensus 193 l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~--t~sK~~~ 270 (427)
T 3fq8_A 193 FAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIAYGGVQEKFGVTPDLT--TLGKIIG 270 (427)
T ss_dssp HHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBTTHHHHHTTCCCSEE--EECGGGG
T ss_pred HHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchhhHhcCCCCChh--hhhhhhh
Confidence 33 36888888888888999888 2 4444 58999999999987 2 211 011111 1454 5559997
Q ss_pred CCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 043610 269 PSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNV 346 (430)
Q Consensus 269 p~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~ 346 (430)
.| +|+++.++++++.+.+..+.+. ....+.|...+.++.++|+.+.+ +.+.++.+++.+++++.
T Consensus 271 -~G~~~G~~~~~~~~~~~~~~~~~~~~---------~~t~~~~~~~~aa~~aal~~~~~----~~~~~~~~~~~~~~~~~ 336 (427)
T 3fq8_A 271 -GGLPVGAYGGKREIMQLVAPAGPMYQ---------AGTLSGNPLAMTAGIKTLELLRQ----PGTYEYLDQITKRLSDG 336 (427)
T ss_dssp -TTSSCEEEEECHHHHTTBTTTSSBCC---------CCTTTTCHHHHHHHHHHHHHHTS----TTHHHHHHHHHHHHHHH
T ss_pred -CCcceEEEEEcHHHHHhhccCCCccc---------cCCCCcCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH
Confidence 36 8999999999887643211110 11124577888888889987643 34566677777777777
Q ss_pred HHcc---CCceecCCCCCCCccceEEEEcCCCch-------------hHHHHHHHHHcCCeecCCCCCCCeeEEeecCCC
Q 043610 347 IDGS---NGFYKCPVEKSVRSFMNVPFTLEKSDL-------------EAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAM 410 (430)
Q Consensus 347 l~~~---~G~~~~~~~~~~rs~~iv~f~~~~~~~-------------~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~ 410 (430)
|.+. .++... .. .....+.+.+++... ..++.+.|.++||.+.++.. .|+++...+
T Consensus 337 l~~~~~~~~~~~~---~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~----~r~~~~~~~ 408 (427)
T 3fq8_A 337 LLAIAQETGHAAC---GG-QVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF----EAGFTSLAH 408 (427)
T ss_dssp HHHHHHHTTCCCE---EE-EETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTC
T ss_pred HHHHHHhCCCCeE---EE-EeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCC----CCEEeeCcC
Confidence 7652 122111 11 112345555543111 12588888899999876431 356666678
Q ss_pred CHHHHHHHHHHHHHHHHh
Q 043610 411 PLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 411 t~edv~~ll~~L~~~~~~ 428 (430)
+++|+++++++|++++++
T Consensus 409 t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 409 TEEDIDATLAAARTVMSA 426 (427)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999998864
No 218
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.72 E-value=1.9e-16 Score=158.92 Aligned_cols=275 Identities=13% Similarity=-0.015 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHH-HHHhC-CceEEecCCC
Q 043610 116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKE-AQKFC-NPQVIWSGKA 191 (430)
Q Consensus 116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~-a~~~g-~~~~v~~~~~ 191 (430)
..+++++.|+++.|.+ +++++ +||++|+.+ +.+++++||+|++....|.+.. +... .++.| +++.++.
T Consensus 68 ~~~~l~~~la~l~g~~---~~~~~-~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~--- 139 (400)
T 3nmy_A 68 TRFAYERCVAALEGGT---RAFAF-ASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDL--- 139 (400)
T ss_dssp HHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECT---
T ss_pred HHHHHHHHHHHHhCCC---CEEEe-cCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECC---
Confidence 3457888899999976 45665 567999998 5778899999998776665432 2222 44567 6555543
Q ss_pred CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCC--CccccccccEEEeCCC
Q 043610 192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCS--KPVDVTRFGVIYAGAQ 264 (430)
Q Consensus 192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~--~~idl~~~d~~~~s~~ 264 (430)
.|+++++ +++++++|++++++|++|.+.| +|.++ +++|+++++|++++.+. .++++ ..|+++.|++
T Consensus 140 ------~d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~-g~div~~S~s 212 (400)
T 3nmy_A 140 ------TDPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPLSL-GADLVVHSAT 212 (400)
T ss_dssp ------TSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGGGG-TCSEEEEETT
T ss_pred ------CCHHHHHHHhccCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChhhc-CCcEEEecCc
Confidence 2567776 7889999999999999999999 78886 68999999999987433 44444 3589999999
Q ss_pred cccc-CC-cc-E-EEEE-cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043610 265 KNVG-PS-GV-T-IVIV-RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKK 339 (430)
Q Consensus 265 K~~g-p~-G~-g-~l~v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l 339 (430)
|++| +. .+ | ++++ ++++.+.+.. +. . ...++.+....+.+...++ .++...++..+.
T Consensus 213 K~l~g~g~~~gG~~vv~~~~~~~~~l~~-------~~---~--~~g~~~~~~~a~~~l~~l~------~l~~r~~~~~~~ 274 (400)
T 3nmy_A 213 KYLNGHSDMVGGIAVVGDNAELAEQMAF-------LQ---N--SIGGVQGPFDSFLALRGLK------TLPLRMRAHCEN 274 (400)
T ss_dssp TTTTCSSSCCCEEEEECSCHHHHHHHHH-------HH---H--HHCCBCCHHHHHHHHHHHT------THHHHHHHHHHH
T ss_pred cccCCCCCcceeEEEEeCCHHHHHHHHH-------HH---H--hcCCCCCHHHHHHHHHhHh------HHHHHHHHHHHH
Confidence 9996 41 23 4 3333 5566554321 00 0 0112334443333333332 356677778888
Q ss_pred HHHHHHHHHccCCceec--CCCCCC----------C-ccceEEEEcCCCchhH-HHHHHHHHcCCeecCC----------
Q 043610 340 AELLYNVIDGSNGFYKC--PVEKSV----------R-SFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKG---------- 395 (430)
Q Consensus 340 ~~~l~~~l~~~~G~~~~--~~~~~~----------r-s~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g---------- 395 (430)
+..+.++|++.+.+..+ +.-+.. + ...+++|.+++..... +|++.|+-.++....|
T Consensus 275 a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~ 354 (400)
T 3nmy_A 275 ALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTELFTLAESLGGVESLVNHPA 354 (400)
T ss_dssp HHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHCSSSEECSCCCSSSCEEECTT
T ss_pred HHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcCCcceEecCCCCCcceeeCcc
Confidence 88999999875544422 111110 1 2357889987411111 3555544322211111
Q ss_pred ---CC------------CCCeeEEeecCCCCHHHHHHHHHHHH
Q 043610 396 ---HR------------SVGGMRASIYNAMPLAGVEKLVAFMK 423 (430)
Q Consensus 396 ---~~------------~~g~iRis~~~~~t~edv~~ll~~L~ 423 (430)
+. ..+.+|+|++..+.++.++.|..+|+
T Consensus 355 ~~~~~~~~~~~~~~~gi~~~liRlsvGle~~~dli~dl~~al~ 397 (400)
T 3nmy_A 355 VMTHASIPVARREQLGISDALVRLSVGIEDLGDLRGDLERALV 397 (400)
T ss_dssp TTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred ccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHHh
Confidence 10 13569999998665655655555554
No 219
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.72 E-value=1.1e-16 Score=161.79 Aligned_cols=317 Identities=11% Similarity=0.009 Sum_probs=192.9
Q ss_pred CCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610 68 EDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG 142 (430)
Q Consensus 68 ~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g 142 (430)
.+..++|..|- +..++.|++++.+.+.+.. .. ... .+..+++++.|+++++ ..+ +|+++ +|
T Consensus 55 g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~--~~------~~~---~~~~~~l~~~la~~~~-~~~-~v~~~-~s 120 (434)
T 2epj_A 55 GARIVDLVLAYGPLILGHKHPRVLEAVEEALARGW--LY------GAP---GEAEVLLAEKILGYVK-RGG-MIRFV-NS 120 (434)
T ss_dssp CCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS--CC------SSC---CHHHHHHHHHHHHHHC-TTC-EEEEE-SS
T ss_pred CCEEEEcccchhcccCCCCCHHHHHHHHHHHHhCC--CC------CCC---CHHHHHHHHHHHHhCC-CCC-EEEEe-CC
Confidence 34455665542 2258899999999886411 10 111 1345578888899885 333 67765 78
Q ss_pred HHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHH--H----HH------hC-C----ceEEecCCCCcCCCCCCcccc
Q 043610 143 ATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKE--A----QK------FC-N----PQVIWSGKAEKYTKIPNFDAL 203 (430)
Q Consensus 143 aT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~--a----~~------~g-~----~~~v~~~~~~~~g~~~d~~~l 203 (430)
+++|++.++... +.++++|+++..++.+...... . .. .| . ..++.. ++ .|++++
T Consensus 121 gseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~----~~---~d~~~l 193 (434)
T 2epj_A 121 GTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVT----PY---NDVEAL 193 (434)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEE----ET---TCHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEec----CC---CCHHHH
Confidence 999999988761 3446788888766554211000 0 00 11 1 011111 01 256666
Q ss_pred c--cC---CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCC-Ccccccc----ccEEEeCCCc
Q 043610 204 E--QN---PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCS-KPVDVTR----FGVIYAGAQK 265 (430)
Q Consensus 204 ~--i~---~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~-~~idl~~----~d~~~~s~~K 265 (430)
+ ++ +++++|++..+++++|.+.| +|.++ +++|+++|+|++|+ +.. ....++. .|++ +++|
T Consensus 194 e~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~--s~sK 271 (434)
T 2epj_A 194 ERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLGLEGAQGYFNIEGDII--VLGK 271 (434)
T ss_dssp HHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSSTTHHHHHHTCCCSEE--EEEG
T ss_pred HHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCCcchhhHHhCCCCCee--eecc
Confidence 6 43 46788888777788998875 34554 58999999999998 311 1111111 2554 6679
Q ss_pred cccC-CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 043610 266 NVGP-SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLY 344 (430)
Q Consensus 266 ~~gp-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~ 344 (430)
++|+ ..+|++++++++++.+.+....+ .+.+ ++.|...++++.++|+.+.+ +.+.++.++++++++
T Consensus 272 ~l~~G~~~G~v~~~~~~~~~l~~~~~~~--------~~~t-~~~~~~~~aa~~a~l~~~~~----~~~~~~~~~~~~~l~ 338 (434)
T 2epj_A 272 IIGGGFPVGAVAGSREVMSLLTPQGKVF--------NAGT-FNAHPITMAAGLATLKALEE----EPVYSVSREAAKALE 338 (434)
T ss_dssp GGGTTSSCEEEEECHHHHTTBTTTSSBC--------CCCT-TTTCHHHHHHHHHHHHHHHH----SCHHHHHHHHHHHHH
T ss_pred hhcCCcceeeeeecHHHHHhhccCCCcc--------cCCC-CCcCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHH
Confidence 9964 12799999999887654311100 0111 24677788888889987764 246677778888888
Q ss_pred HHHHcc---CCceecCCCCCCCccceEEEEcCCC------------ch-hHHHHHHHHHcCCeecCCCCCCCeeEEeecC
Q 043610 345 NVIDGS---NGFYKCPVEKSVRSFMNVPFTLEKS------------DL-EAEFVKEAAKEKMVQLKGHRSVGGMRASIYN 408 (430)
Q Consensus 345 ~~l~~~---~G~~~~~~~~~~rs~~iv~f~~~~~------------~~-~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~ 408 (430)
+.|++. .++... +. ..+ ..+.+.+++. .. ..++.+.|.++||.+.++.. ..+|++ .
T Consensus 339 ~~L~~~~~~~~~~~~-~~--~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~~~--~ 410 (434)
T 2epj_A 339 EAASEVLDRTGLPYT-IN--RVE-SMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSNL--EAVFTG--L 410 (434)
T ss_dssp HHHHHHHHHHTCCEE-EE--EET-TEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT--SCEECC--T
T ss_pred HHHHHHHhhCCCcEE-EE--Eee-eEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccCC--CcEEEe--c
Confidence 888753 133211 00 122 3456666531 11 22688889899999877532 235554 5
Q ss_pred CCCHHHHHHHHHHHHHHHHh
Q 043610 409 AMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 409 ~~t~edv~~ll~~L~~~~~~ 428 (430)
.++++|+++++++|++++++
T Consensus 411 ~~t~e~i~~~l~~l~~~l~~ 430 (434)
T 2epj_A 411 PHQGEALEIAVEGLRSSLKT 430 (434)
T ss_dssp TCSHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHH
Confidence 67999999999999998764
No 220
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.71 E-value=6.2e-16 Score=158.43 Aligned_cols=328 Identities=11% Similarity=0.007 Sum_probs=196.4
Q ss_pred CCCCceeecCC--C---CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610 67 QEDRVFNFAAG--P---ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG 141 (430)
Q Consensus 67 ~~~~~~l~~~g--p---~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ 141 (430)
..++.++|..| . +-.+|.|++++.+.+.+... ..+ ...... +...++++.|+++++.+.+ +|+|+ +
T Consensus 53 ~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~-~~~---~~~~~~---~~~~~lae~l~~~~~~~~~-~v~~~-~ 123 (472)
T 3hmu_A 53 EGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPY-YNT---FFKTTH---VPAIALAQKLAELAPGDLN-HVFFA-G 123 (472)
T ss_dssp TCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSC-CCS---SSSEEC---HHHHHHHHHHHHHSCTTEE-EEEEE-S
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccc-ccc---ccccCC---HHHHHHHHHHHHhCCCCCC-EEEEe-C
Confidence 34455666554 2 22478999999998875321 110 111111 3345778888899876554 67665 7
Q ss_pred cHHHHHHHHHhhcCC--------CCCcEEEEeCChhHHHHHHHHHHh-C------------CceEEecCCCCcCC--CCC
Q 043610 142 GATTQFAAVPLNLCT--------PNDPVDYIVTGSWGDKAFKEAQKF-C------------NPQVIWSGKAEKYT--KIP 198 (430)
Q Consensus 142 gaT~a~~~~~~sl~~--------~gd~vl~~~~g~~~~~~~~~a~~~-g------------~~~~v~~~~~~~~g--~~~ 198 (430)
||++|++.++..+.. ++++|++.+.++.+... .+... + .+..++... .+. ...
T Consensus 124 sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~--~~~~~~~~~~~~~~~~~~~~~~~v~~p~--~~~~~~~~ 199 (472)
T 3hmu_A 124 GGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTV--ASSALGGMAGMHAQSGLIPDVHHINQPN--WWAEGGDM 199 (472)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSH--HHHHHSCCHHHHHTTCCCSSEEEECCCC--HHHHCTTC
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccH--HhhhccCChhhccccCCCCCcEEeCCCc--cccCCccc
Confidence 899999998877643 35677766666544321 11111 1 122333211 000 001
Q ss_pred C--------ccccc--cC----CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccc
Q 043610 199 N--------FDALE--QN----PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVT 254 (430)
Q Consensus 199 d--------~~~l~--i~----~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~ 254 (430)
+ +++|+ +. +++++|++..+++.+|.+.+ +|.++ +++|+++|+|++|+ +|-. .+-.+
T Consensus 200 ~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~ 279 (472)
T 3hmu_A 200 DPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQ 279 (472)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhH
Confidence 2 45555 33 45677777777888888875 24444 58999999999987 5432 11112
Q ss_pred c----ccEEEeCCCccccC--CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcC
Q 043610 255 R----FGVIYAGAQKNVGP--SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGG 328 (430)
Q Consensus 255 ~----~d~~~~s~~K~~gp--~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g 328 (430)
. .|+++ +.|.+|- ..+|++++++++++.+.+ .++.. +.+ ++.|..+++++.++|+.+.+
T Consensus 280 ~~~v~pdi~t--~sK~l~gg~~plG~v~~~~~i~~~~~~-~~~~~--------~~t-~~~np~a~aAa~aaL~~~~~--- 344 (472)
T 3hmu_A 280 TMGIRPHIMT--IAKGLSSGYAPIGGSIVCDEVAHVIGK-DEFNH--------GYT-YSGHPVAAAVALENLRILEE--- 344 (472)
T ss_dssp HHTCCCSEEE--ECGGGTTTSSCCEEEEEEHHHHHHHTT-SCBCC--------CCT-TTTCHHHHHHHHHHHHHHHH---
T ss_pred HhCCCCceee--echhhhcCCcceEEEEECHHHHHhccc-CCccc--------cCC-CCCCHHHHHHHHHHHHHHHH---
Confidence 1 25665 4599953 347999999999887621 11111 112 34567788888889987754
Q ss_pred HHHHHHHHH-HHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc------------hhHHHHHHHHHcCCeecCC
Q 043610 329 LNEVEKMNR-KKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD------------LEAEFVKEAAKEKMVQLKG 395 (430)
Q Consensus 329 ~~~v~~~~~-~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~------------~~~~~~~~L~~~Gi~~~~g 395 (430)
+.+.++.+ ++.+++++.|++...+..+. +-.... ..+.+.+.+.. ...++.+.|.++||++.++
T Consensus 345 -~~~~~~~~~~~~~~l~~~L~~l~~~~~v~-~vr~~G-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~ 421 (472)
T 3hmu_A 345 -ENILDHVRNVAAPYLKEKWEALTDHPLVG-EAKIVG-MMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHV 421 (472)
T ss_dssp -TTHHHHHHHTHHHHHHHHHHGGGGSTTEE-EEEEET-TEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEE
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEEecC-ceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEec
Confidence 24566666 77777777776521111110 000112 23445554211 1236888888999998763
Q ss_pred CCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 396 HRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 396 ~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
. +.|||++...++++|+++++++|++++++
T Consensus 422 g---~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 451 (472)
T 3hmu_A 422 G---DRMIISPPLVITPAEIDEMFVRIRKSLDE 451 (472)
T ss_dssp T---TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred C---CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 2 68999998889999999999999998754
No 221
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.71 E-value=3.2e-16 Score=157.93 Aligned_cols=322 Identities=12% Similarity=0.009 Sum_probs=192.3
Q ss_pred ceeecCC-------CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHH-hCC--CCCcEEEEEe
Q 043610 71 VFNFAAG-------PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRAL-LNI--PQEYSVLFLQ 140 (430)
Q Consensus 71 ~~l~~~g-------p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l-~g~--~~~~~vv~~~ 140 (430)
.+|++.| ..++.+.|++|.+..+++-...++. .....++|+ +.++++ +|. +.+....+.+
T Consensus 46 kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~---p~~G~p~lr-------~aia~~~~g~~~~~~~~~~~qt 115 (420)
T 4h51_A 46 KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYL---PISGYQPFI-------DEAVKIIYGNTVELENLVAVQT 115 (420)
T ss_dssp CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCC---CTTCCHHHH-------HHHHHHHHC---CGGGEEEEEE
T ss_pred CEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCC---CcCChHHHH-------HHHHHHhcCCCccccccceeee
Confidence 4566655 4567789999876655432222222 122234444 333332 343 2222333335
Q ss_pred CcHHHHHHHHHh----hcCCCCCcEEEEeCChhHHHHHHHHHHhC-Cce-EEecCCCCcCCCCCCccccc-----cCCCc
Q 043610 141 GGATTQFAAVPL----NLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQ-VIWSGKAEKYTKIPNFDALE-----QNPDA 209 (430)
Q Consensus 141 ~gaT~a~~~~~~----sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~-~v~~~~~~~~g~~~d~~~l~-----i~~~~ 209 (430)
.|+|.|+...+. .+..|||+|++.++.+..+. ...+..| +.+ +.+..++ .+..+|.+.+. ..+++
T Consensus 116 ~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~--~i~~~aG~~~V~~~~~~~~--~~~~~d~~~~~~~l~~~~~~~ 191 (420)
T 4h51_A 116 LSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHY--GVVKAAGWKNICTYAYYDP--KTVSLNFEGMKKDILAAPDGS 191 (420)
T ss_dssp EHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHH--HHHHHTTCCCEEEEECEEG--GGTEECHHHHHHHHHHSCSSC
T ss_pred cCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHH--HHHHHcCCeEEEeeccccc--cccCCCHHHHHHHHhccCCCc
Confidence 678888765443 34579999999888776654 3455566 543 3333221 11234554432 46788
Q ss_pred cEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccC-cCCCCcccc---------cccc--EEEeCCCccccCCc
Q 043610 210 KYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSS-NFCSKPVDV---------TRFG--VIYAGAQKNVGPSG 271 (430)
Q Consensus 210 ~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~-s~G~~~idl---------~~~d--~~~~s~~K~~gp~G 271 (430)
++++++.++||||...+ + |.++ ++++++++.|+++ .+.....+. +..+ +++.|++|.+|++|
T Consensus 192 ~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G 271 (420)
T 4h51_A 192 VFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYS 271 (420)
T ss_dssp EEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGG
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEecccccccccc
Confidence 88888999999999999 3 4454 6889999999875 444322111 1112 67899999999989
Q ss_pred --cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHH--HHH--hcCHHHHHHHHHHHHHHHHH
Q 043610 272 --VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY--LLE--LGGLNEVEKMNRKKAELLYN 345 (430)
Q Consensus 272 --~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~--l~~--~~g~~~v~~~~~~l~~~l~~ 345 (430)
+|++++..+..+....... .+ .. . ....+..++..++..+...+.. +.. +..++.++++++++++.+.+
T Consensus 272 ~RvG~~~~~~~~~~~~~~~~~-~l--~~-~-~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~ 346 (420)
T 4h51_A 272 ERAGTLSLLLKDKTKRADVKS-VM--DS-L-IREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYD 346 (420)
T ss_dssp GCEEEEEEECSCHHHHHHHHH-HH--HH-H-HHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEecccCHHHHHHHHH-HH--HH-h-hhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998876443332110000 00 00 0 1122346677777776666631 110 12467889999999999999
Q ss_pred HHHccCCce----ecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHH
Q 043610 346 VIDGSNGFY----KCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAF 421 (430)
Q Consensus 346 ~l~~~~G~~----~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~ 421 (430)
+|.+ .|.. .+. . .. +.+++. +++.+.++.|+++||...+| -|||+.+ .+++.|+++.++
T Consensus 347 ~L~~-~g~~~~~~~i~-~---q~-GmF~~~----gls~e~v~~L~e~~Vy~~~~------gRis~Ag-l~~~ni~~~a~a 409 (420)
T 4h51_A 347 ELLR-LQTPGSWEHVI-N---QI-GMFSFL----GLSKAQCEYCQNHNIFITVS------GRANMAG-LTHETALMLAQT 409 (420)
T ss_dssp HHHH-TTCSSCCTHHH-H---CC-SSEEEC----CCCHHHHHHHHHTTEECCTT------CEEEGGG-CCHHHHHHHHHH
T ss_pred HHHH-hCCCCCCCeec-C---CC-ceEEec----CcCHHHHHHHHhCCEEEcCC------CEEEecc-CCHHHHHHHHHH
Confidence 9987 4422 111 1 12 234432 34556778899999987764 2999874 578999999999
Q ss_pred HHHHHHh
Q 043610 422 MKDFQAK 428 (430)
Q Consensus 422 L~~~~~~ 428 (430)
|.+++++
T Consensus 410 I~~vvr~ 416 (420)
T 4h51_A 410 INDAVRN 416 (420)
T ss_dssp HHHHHC-
T ss_pred HHHHHHH
Confidence 9998764
No 222
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.71 E-value=6.9e-16 Score=158.29 Aligned_cols=331 Identities=10% Similarity=0.000 Sum_probs=198.2
Q ss_pred CCCCceeecCC--C---CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610 67 QEDRVFNFAAG--P---ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG 141 (430)
Q Consensus 67 ~~~~~~l~~~g--p---~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ 141 (430)
..++.++|..| . +-.+|.|++++.+.+.+.. .+.+ + ... .+...++.+.|+++++...+ +|+|+ +
T Consensus 52 ~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~-~---~~~---~~~~~~la~~l~~~~~~~~~-~v~~~-~ 121 (476)
T 3i5t_A 52 DGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLP-YASP-W---YMA---TSPAARLAEKIATLTPGDLN-RIFFT-T 121 (476)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCC-CCCT-T---TCB---CHHHHHHHHHHHTTSSTTCC-EEEEE-S
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhcc-Cccc-C---ccC---CHHHHHHHHHHHhcCCCCcC-EEEEe-C
Confidence 34445555554 2 2348999999999887531 1111 0 111 13445778888888876555 77775 7
Q ss_pred cHHHHHHHHHhhcC--------CCCCcEEEEeCChhHHHHHHHHHHh-CCc-------------eEEecCCCCcCCCCCC
Q 043610 142 GATTQFAAVPLNLC--------TPNDPVDYIVTGSWGDKAFKEAQKF-CNP-------------QVIWSGKAEKYTKIPN 199 (430)
Q Consensus 142 gaT~a~~~~~~sl~--------~~gd~vl~~~~g~~~~~~~~~a~~~-g~~-------------~~v~~~~~~~~g~~~d 199 (430)
||++|++.++..+. ..+++|++.+.++.+... .+... +.. ..++... .+.. .+
T Consensus 122 sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~-~~ 196 (476)
T 3i5t_A 122 GGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTA--LTAACTGRTGNWPNFDIAQDRISFLSSPN--PRHA-GN 196 (476)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSH--HHHHTCCCGGGCTTSCCCCTTEEEECCCC--GGGC-TT
T ss_pred chHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCCh--hhccccCChhhccccCCCCCCcEEeCCCc--cccc-CC
Confidence 89999999887763 225577777666555321 12222 211 1222110 0110 11
Q ss_pred ----------ccccc--cC----CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--cccc
Q 043610 200 ----------FDALE--QN----PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDV 253 (430)
Q Consensus 200 ----------~~~l~--i~----~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl 253 (430)
+++|+ +. +++++|++..+++++|.+.+ +|.++ +++|+++|+|++|+ +|-. .+..
T Consensus 197 ~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~ 276 (476)
T 3i5t_A 197 RSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFAS 276 (476)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHH
T ss_pred CchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceee
Confidence 44555 32 46788888888888897655 24444 58999999999987 5422 1112
Q ss_pred c-c----ccEEEeCCCccccC--CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHh
Q 043610 254 T-R----FGVIYAGAQKNVGP--SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLEL 326 (430)
Q Consensus 254 ~-~----~d~~~~s~~K~~gp--~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~ 326 (430)
. . .|+++ +.|.+|. ..+|++++++++++.+.+.... ... ...+.+ ++.|..++.++.++|+.+.+
T Consensus 277 ~~~~~v~pdi~t--~sK~l~~G~~plg~v~~~~~i~~~~~~~~~~---~~~-~~~~~t-~~~np~a~aAa~aaL~~~~~- 348 (476)
T 3i5t_A 277 EKVFGVVPDIIT--FAKGVTSGYVPLGGLAISEAVLARISGENAK---GSW-FTNGYT-YSNQPVACAAALANIELMER- 348 (476)
T ss_dssp HHTTCCCCSEEE--ECGGGGTTSSCCEEEEECHHHHHTTSGGGCT---TCE-ECCCCT-TTTCHHHHHHHHHHHHHHHH-
T ss_pred ecccCCCcchhh--hhhhhcCCCcCeEEEEECHHHHHHHhcCCcc---ccc-ccccCC-CCcCHHHHHHHHHHHHHHHh-
Confidence 2 2 25664 4599953 3469999999998865421000 000 001112 35567788888899987754
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc-----------hhHHHHHHHHHcCCeecCC
Q 043610 327 GGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD-----------LEAEFVKEAAKEKMVQLKG 395 (430)
Q Consensus 327 ~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~-----------~~~~~~~~L~~~Gi~~~~g 395 (430)
+.+.++.+++.+++++.|.+...+..+. +-.... ..+.+.+.+.. ...++.+.|.++||++.+.
T Consensus 349 ---~~~~~~~~~~~~~l~~~L~~l~~~~~v~-~v~~~G-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~ 423 (476)
T 3i5t_A 349 ---EGIVDQAREMADYFAAALASLRDLPGVA-ETRSVG-LVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPL 423 (476)
T ss_dssp ---TTHHHHHHHHHHHHHHHHHTTTTSTTEE-EEEEET-TEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEE
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEEecC-ceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEec
Confidence 3567777888888888887521111110 000112 23445554311 1226778888899998652
Q ss_pred CCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 396 HRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 396 ~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
. +.+||++...++++|+++++++|++++++
T Consensus 424 g---~~iRi~p~l~~t~e~i~~~l~~l~~~l~~ 453 (476)
T 3i5t_A 424 G---DLCVISPPLIISRAQIDEMVAIMRQAITE 453 (476)
T ss_dssp T---TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred C---CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1 57999988889999999999999998764
No 223
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.70 E-value=2.2e-16 Score=159.42 Aligned_cols=323 Identities=10% Similarity=-0.016 Sum_probs=190.4
Q ss_pred CCCCceeecCCCC-----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610 67 QEDRVFNFAAGPA-----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG 141 (430)
Q Consensus 67 ~~~~~~l~~~gp~-----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ 141 (430)
..++.++|..|-. ..+|.|++++.+.+.+.... .+.. ....++++.|+++++ ..+ +++|+ +
T Consensus 51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~--------~~~~---~~~~~l~~~la~~~~-~~~-~v~~~-~ 116 (429)
T 3k28_A 51 DGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSF--------GAPT---EIENKLAKLVIERVP-SIE-IVRMV-N 116 (429)
T ss_dssp TCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCC--------SSCC---HHHHHHHHHHHHHST-TCS-EEEEE-S
T ss_pred CCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCc--------CCCC---HHHHHHHHHHHHhCC-CCC-EEEEe-C
Confidence 3445555665432 25899999999988652110 0111 234467788888886 343 77775 7
Q ss_pred cHHHHHHHHHhhcC--CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCC------------CCCccccc--
Q 043610 142 GATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTK------------IPNFDALE-- 204 (430)
Q Consensus 142 gaT~a~~~~~~sl~--~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~------------~~d~~~l~-- 204 (430)
|+|++++.++..+. .++++|++...++.+.... .....| ....+.... ..+. ..|+++++
T Consensus 117 ~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~-~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~~ 193 (429)
T 3k28_A 117 SGTEATMSALRLARGYTGRNKILKFIGCYHGHGDS-LLIKAGSGVATLGLPD--SPGVPEGVAKNTITVAYNDLESVKYA 193 (429)
T ss_dssp SHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGG-GCSSCCTTC-----CC--CTTCCHHHHTTEEEEETTCHHHHHHH
T ss_pred ChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHH-HHHhcCCcccccCCCC--cCCCCCcccCceeecCCCCHHHHHHH
Confidence 89999999887654 3567788777665443110 000112 121111110 0010 01556665
Q ss_pred cC---CCccEEEEeecCCCccccCC--C----Cccc-cCCCcEEEEeccCcCCC--Cccccccc----cEEEeCCCcccc
Q 043610 205 QN---PDAKYLHICANETIHGVEFK--E----YPSA-KNSTGILVADMSSNFCS--KPVDVTRF----GVIYAGAQKNVG 268 (430)
Q Consensus 205 i~---~~~~lv~i~~~~t~tG~~~p--e----i~~~-~~~g~~lvvD~a~s~G~--~~idl~~~----d~~~~s~~K~~g 268 (430)
+. +++++|++..+++.+|.+.+ + |.++ +++|+++|+|++|.--. .....+.+ |++ +++|.+|
T Consensus 194 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~--t~sK~~~ 271 (429)
T 3k28_A 194 FEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGFRVAYNCGQGYYGVTPDLT--CLGKVIG 271 (429)
T ss_dssp HHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTSSTTHHHHHHTCCCSEE--EECGGGG
T ss_pred HHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchHHHHhCCCCcee--hhhhhhc
Confidence 33 46777888777778888876 2 4444 58999999999986111 11111111 444 5679996
Q ss_pred -CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Q 043610 269 -PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVI 347 (430)
Q Consensus 269 -p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l 347 (430)
...+|++++++++++.+.+..+.+. +. .++.|..++.++.++|+.+ . ++..++.+++++++++.|
T Consensus 272 ~G~~iG~~~~~~~~~~~~~~~~~~~~--------~~-t~~~~~~a~aaa~aal~~~----~-~~~~~~~~~~~~~l~~~L 337 (429)
T 3k28_A 272 GGLPVGAYGGKAEIMRQVAPSGPIYQ--------AG-TLSGNPLAMAAGYETLVQL----T-PESYVEFERKAEMLEAGL 337 (429)
T ss_dssp TTSCCEEEEECHHHHTTBTTTSSBCC--------CC-TTTTCHHHHHHHHHHHHTC----C-HHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEcHHHHhhhccCCCccc--------cC-CCCCChHHHHHHHHHHHHH----H-HHHHHHHHHHHHHHHHHH
Confidence 3348999999999887543211111 11 1356777777777787743 2 677888888888888888
Q ss_pred HccCC-ceecCCCCCCCccceEEEEcCCC------------ch-hHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHH
Q 043610 348 DGSNG-FYKCPVEKSVRSFMNVPFTLEKS------------DL-EAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 413 (430)
Q Consensus 348 ~~~~G-~~~~~~~~~~rs~~iv~f~~~~~------------~~-~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~e 413 (430)
.+..+ +.... ...... ..+.+.+.+. .. ..++.+.|.++||.+.++. .+.+|+++ .++++
T Consensus 338 ~~~~~~~~~~~-~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~r~~~--~~t~e 411 (429)
T 3k28_A 338 RKAAEKHGIPH-HINRAG-SMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPPSQ--FEGLFLST--VHSDA 411 (429)
T ss_dssp HHHHHHTTCCC-EEEEET-TEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSST--TSCBCCCT--TCCHH
T ss_pred HHHHhhCCCCE-EEEeec-cEEEEEEecCCcccccccccccHHHHHHHHHHHHHCCeEEecCC--CCCEEEEC--CCCHH
Confidence 76310 01100 000112 2344554321 11 1368888889999987642 34688865 56999
Q ss_pred HHHHHHHHHHHHHHh
Q 043610 414 GVEKLVAFMKDFQAK 428 (430)
Q Consensus 414 dv~~ll~~L~~~~~~ 428 (430)
|+++++++|++++++
T Consensus 412 ~i~~~l~~l~~~l~~ 426 (429)
T 3k28_A 412 DIEATIAAAEIAMSK 426 (429)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998875
No 224
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.69 E-value=1.1e-16 Score=162.00 Aligned_cols=246 Identities=11% Similarity=0.094 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHhCCCCCcEEE--EEeCcHHHHHHHHHhhcCCCCCcEEEEe-CChhHHH-HH-------HHHHHhC-Cce
Q 043610 117 IEKAESDLRALLNIPQEYSVL--FLQGGATTQFAAVPLNLCTPNDPVDYIV-TGSWGDK-AF-------KEAQKFC-NPQ 184 (430)
Q Consensus 117 ~~~~r~~la~l~g~~~~~~vv--~~~~gaT~a~~~~~~sl~~~gd~vl~~~-~g~~~~~-~~-------~~a~~~g-~~~ 184 (430)
.+++++.+++++|++.. .+ ++ +|||+|+..++.++++|||+|++.. ..+.+.. .. ..++..| +++
T Consensus 67 ~~~l~~~la~~~g~~~~--~~~i~~-~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~ 143 (431)
T 3ht4_A 67 RDTLEKVYADVFGAEAG--LVRPQI-ISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYN 143 (431)
T ss_dssp HHHHHHHHHHHTTCSEE--CCBTTS-CSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEE
T ss_pred HHHHHHHHHHHhCCCcc--ccccee-eCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEE
Confidence 66889999999999752 22 13 3679999999999999999998766 3443321 11 1123456 666
Q ss_pred EEecCCCCcCCCCCCccccc--cCCCccEEEEee-cCCCccccCC-----CCccc-cC--CCcEEEEeccCcCCCCcccc
Q 043610 185 VIWSGKAEKYTKIPNFDALE--QNPDAKYLHICA-NETIHGVEFK-----EYPSA-KN--STGILVADMSSNFCSKPVDV 253 (430)
Q Consensus 185 ~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~-~~t~tG~~~p-----ei~~~-~~--~g~~lvvD~a~s~G~~~idl 253 (430)
.++..+ .+ .+|+++++ +++++++|++++ ++|++|...+ +|.++ ++ +|+++++|++++.+....+.
T Consensus 144 ~v~~~~---~~-~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~ 219 (431)
T 3ht4_A 144 AVPLTE---GG-LVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEP 219 (431)
T ss_dssp ECCBCT---TS-SBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCG
T ss_pred EeCCCC---CC-CcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCc
Confidence 666543 22 57888887 788999999995 6777777666 45554 57 89999999999877643222
Q ss_pred c--cccEEEeCCCccc-c---CCccEEEEEcHHHHhccCC--CCCccccccchhhcCCCCC-CccHHHHHHHHHHHHHHH
Q 043610 254 T--RFGVIYAGAQKNV-G---PSGVTIVIVRKDLLGNAQD--KTPLMLDYKIHDENNSLYN-TPPCYCIYMCGLVFEYLL 324 (430)
Q Consensus 254 ~--~~d~~~~s~~K~~-g---p~G~g~l~v~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~-T~~~~~~~a~~~al~~l~ 324 (430)
. ..|+++.|++|++ | |+| |+++.++++++.+.. ..+. + +...+ ++. ..+.+...++.
T Consensus 220 ~~~g~Di~~~S~sK~lgg~~~~~G-G~v~~~~~li~~l~~~~~~~~-~--------g~~~~~~~~--~~~~~~~~l~~-- 285 (431)
T 3ht4_A 220 CHVGADLMAGSLIKNPGGGIVKTG-GYIVGKEQYVEACAYRLTSPG-I--------GAEAGASLY--SLQEMYQGFFL-- 285 (431)
T ss_dssp GGTTCSEEEEETTSGGGTTTCSSC-EEEEECHHHHHHHHHHHSCTT-T--------TTSCSCCCS--CSHHHHHHHHH--
T ss_pred cccCCeEEEcCccccCCCCCCCce-EEEEecHHHHHHHHHHhccCC-c--------ccccCccHH--HHHHHHhHhhh--
Confidence 2 2489999999996 2 778 999999998876532 1110 0 00111 111 11223333332
Q ss_pred HhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHc
Q 043610 325 ELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKE 388 (430)
Q Consensus 325 ~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~ 388 (430)
+..+.++..+.+.++.+.|++ .|+++.+.....+...+++|.+++...-.+|++.|.+.
T Consensus 286 ----~~~~~~~~~~~a~~l~~~L~~-~g~~v~p~~~~~~~~li~~i~l~~~~~~~~~~~~l~~~ 344 (431)
T 3ht4_A 286 ----APHVAGQALKGAIFTAAFLEK-LGMNTSPAWNAPRTDLIQSVQFDDKDRMIAFCQAIQYA 344 (431)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHH-HTCCEESCTTSCCSSSCCEEECCCHHHHHHHHHHHHHT
T ss_pred ----HHHHHHHHHHHHHHHHHHHHh-CcCEecCCCCCCCccEEEEEEeCCHHHHHHHHHHHHhc
Confidence 345677788888899999986 67777553222345557778887422112688888775
No 225
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.69 E-value=1.7e-15 Score=152.86 Aligned_cols=324 Identities=7% Similarity=-0.056 Sum_probs=187.0
Q ss_pred CCCCceeecCCCC-----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610 67 QEDRVFNFAAGPA-----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG 141 (430)
Q Consensus 67 ~~~~~~l~~~gp~-----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ 141 (430)
..++.+.|.+|-. -.+|.|++++.+.+.+.... .... ....++++.|+++++ ..+ +++|+ +
T Consensus 51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~-------~~~~----~~~~~la~~l~~~~~-~~~-~v~~~-~ 116 (429)
T 4e77_A 51 DGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSF-------GAPT----EMEVKMAQLVTDLVP-TMD-MVRMV-N 116 (429)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCC-------SSCC----HHHHHHHHHHHHHST-TCS-EEEEE-S
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCccc-------CCCC----HHHHHHHHHHHhhCC-CCC-EEEEe-C
Confidence 3445555665442 14899999999988642110 0111 344577888888887 343 77775 7
Q ss_pred cHHHHHHHHHhhcC--CCCCcEEEEeCChhHHHHHHHHHHh-CCce-EEecCCCC--cCC------CCCCccccc--cC-
Q 043610 142 GATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKF-CNPQ-VIWSGKAE--KYT------KIPNFDALE--QN- 206 (430)
Q Consensus 142 gaT~a~~~~~~sl~--~~gd~vl~~~~g~~~~~~~~~a~~~-g~~~-~v~~~~~~--~~g------~~~d~~~l~--i~- 206 (430)
|+|++++.++.... .++++|++...++.+.......... +... ..+....- ... ...|+++++ +.
T Consensus 117 sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 196 (429)
T 4e77_A 117 SGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQ 196 (429)
T ss_dssp SHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHh
Confidence 89999999877432 3466777766665553211111000 1000 00100000 000 011556665 32
Q ss_pred --CCccEEEEeecCCCccccCC-C--C---ccc-cCCCcEEEEeccCc---CCCCccccccc----cEEEeCCCcccc-C
Q 043610 207 --PDAKYLHICANETIHGVEFK-E--Y---PSA-KNSTGILVADMSSN---FCSKPVDVTRF----GVIYAGAQKNVG-P 269 (430)
Q Consensus 207 --~~~~lv~i~~~~t~tG~~~p-e--i---~~~-~~~g~~lvvD~a~s---~G~~~idl~~~----d~~~~s~~K~~g-p 269 (430)
+++++|++..+++.+|.+.+ + + .++ +++|+++|+|++|+ .|.. ...+.+ |++ +++|.+| .
T Consensus 197 ~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g~~-~~~~~~~~~pdi~--t~sK~~~~G 273 (429)
T 4e77_A 197 YPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALA-GAQDYYHVIPDLT--CLGKIIGGG 273 (429)
T ss_dssp STTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTBTT-CHHHHTTCCCSEE--EEEGGGGTT
T ss_pred cCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccCcc-hHHHhcCCCCCee--eecccccCC
Confidence 46777777766777788877 2 4 443 58999999999998 3321 112222 454 6679996 2
Q ss_pred CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610 270 SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG 349 (430)
Q Consensus 270 ~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~ 349 (430)
..+|+++.++++++.+.+....+. + ..++.|...+.++.++|+.+.+ +...++.+++.+++++.|.+
T Consensus 274 ~~~G~~~~~~~~~~~l~~~~~~~~--------~-~t~~~~~~~~aaa~aal~~~~~----~~~~~~~~~~~~~l~~~L~~ 340 (429)
T 4e77_A 274 MPVGAFGGRREVMNALAPTGPVYQ--------A-GTLSGNPIAMAAGFACLTEISQ----VGVYETLTELTDSLATGLRH 340 (429)
T ss_dssp SCCEEEEECHHHHTTBTTTSSBCC-----------CCCCCHHHHHHHHHHHHHHTS----TTHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECHHHHHHhccCCCccc--------c-CCCCCCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHH
Confidence 247999999999887543111110 1 1135778888888899987642 35566666677777776664
Q ss_pred c---CCceecCCCCCCCccceEEEEcCCCc-------------hh-HHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCH
Q 043610 350 S---NGFYKCPVEKSVRSFMNVPFTLEKSD-------------LE-AEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPL 412 (430)
Q Consensus 350 ~---~G~~~~~~~~~~rs~~iv~f~~~~~~-------------~~-~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~ 412 (430)
. .++... ..... ..+.+.+++.. .. .++.+.|.++||.+.++.. ..+|+ ...+++
T Consensus 341 ~~~~~~~~~~---~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~--~~~~~--~~~~t~ 412 (429)
T 4e77_A 341 AAKEENIPLV---VNHVG-GMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSAF--EAGFM--SLAHSN 412 (429)
T ss_dssp HHHHTTCCCE---EEEET-TEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSSTT--SCEEC--CTTCCH
T ss_pred HHHhCCCceE---EEEee-eEEEEEEccCcccccccccccccHHHHHHHHHHHHHCCeEEeecCC--CCEEE--eccCCH
Confidence 2 222111 11112 34556665421 11 3688889899999876531 23555 456799
Q ss_pred HHHHHHHHHHHHHHHh
Q 043610 413 AGVEKLVAFMKDFQAK 428 (430)
Q Consensus 413 edv~~ll~~L~~~~~~ 428 (430)
+|+++++++|++++++
T Consensus 413 e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 413 EDIQKTVNAARRCFAK 428 (429)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 226
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.68 E-value=1.3e-15 Score=153.51 Aligned_cols=313 Identities=12% Similarity=0.007 Sum_probs=190.1
Q ss_pred CCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610 68 EDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG 142 (430)
Q Consensus 68 ~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g 142 (430)
.+..++|..|- +..++.|++++.+.+.+. ... .+. .+..+++++.|+++++ ..+ +|+++ +|
T Consensus 51 g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~------~~~---~~~~~~l~~~l~~~~~-~~~-~v~~~-~~ 116 (424)
T 2e7u_A 51 GNRYLDYVMSWGPLILGHAHPKVLARVRETLERG--LTF------GAP---SPLEVALAKKVKRAYP-FVD-LVRFV-NS 116 (424)
T ss_dssp CCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTC--SCC------SSC---CHHHHHHHHHHHHHCT-TCC-EEEEE-SS
T ss_pred CCEEEEccccccccccCCCCHHHHHHHHHHHHhC--CCC------CCC---CHHHHHHHHHHHHhCC-CCC-EEEEe-CC
Confidence 34455665542 235889999999988641 110 011 1344577888888886 444 77775 78
Q ss_pred HHHHHHHHHhh--cCCCCCcEEEEeCChhHHHHHHHHHH--------------hC-C----ceEEecCCCCcCCCCCCcc
Q 043610 143 ATTQFAAVPLN--LCTPNDPVDYIVTGSWGDKAFKEAQK--------------FC-N----PQVIWSGKAEKYTKIPNFD 201 (430)
Q Consensus 143 aT~a~~~~~~s--l~~~gd~vl~~~~g~~~~~~~~~a~~--------------~g-~----~~~v~~~~~~~~g~~~d~~ 201 (430)
+++|+..++.. .+.++++|++.+.++.+... .+.. .| . ..++.. ++ .|++
T Consensus 117 g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~----~~---~d~~ 187 (424)
T 2e7u_A 117 GTEATMSALRLARGYTGRPYIVKFRGNYHGHAD--GLLVEAGSGALTLGVPSSAGVPEEYAKLTLVL----EY---NDPE 187 (424)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCG--GGSEECCSSSCCBCEESSTTCCHHHHTTEEEE----CT---TCHH
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcH--HHHHhcCCcccccCCCCCCCCCCccCCceEeC----CC---CCHH
Confidence 99999988775 13345778877766544211 0100 01 0 011111 01 3566
Q ss_pred ccc--cC---CCccEEEEeecCCCccccCC------CCccccCCCcEEEEeccCc-CCC-Ccccccc----ccEEEeCCC
Q 043610 202 ALE--QN---PDAKYLHICANETIHGVEFK------EYPSAKNSTGILVADMSSN-FCS-KPVDVTR----FGVIYAGAQ 264 (430)
Q Consensus 202 ~l~--i~---~~~~lv~i~~~~t~tG~~~p------ei~~~~~~g~~lvvD~a~s-~G~-~~idl~~----~d~~~~s~~ 264 (430)
+++ +. +++++|++..+++++|.+.| +|.+++++|+++|+|++|+ +.. ....++. .|++ +++
T Consensus 188 ~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~--s~s 265 (424)
T 2e7u_A 188 GLREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEAKAYGVLLIADEVMTGFRLAFGGATELLGLKPDLV--TLG 265 (424)
T ss_dssp HHHHHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHGGGGTCEEEEECTTTTTTSSTTHHHHHHTCCCSEE--EEC
T ss_pred HHHHHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHcCCEEEEecCccccccchhHHHHHhCCCcchh--hhh
Confidence 666 43 45677777666666998775 2444457899999999998 311 1111111 2544 778
Q ss_pred ccccC-CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 043610 265 KNVGP-SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELL 343 (430)
Q Consensus 265 K~~gp-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l 343 (430)
|++|+ ..+|++++++++++.+.+....+ .+.+ ++.|...+.++.++|+.+.+ .+++.++.+++++++
T Consensus 266 K~l~~G~~~G~~~~~~~~~~~~~~~~~~~--------~~~t-~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~~l 333 (424)
T 2e7u_A 266 KILGGGLPAAAYAGRREIMEKVAPLGPVY--------QAGT-LSGNPLAMAAGLATLELLEE---NPGYYAYLEDLGARL 333 (424)
T ss_dssp GGGGTTSSCEEEEECHHHHTTBTTTSSBC--------CCCT-TCSCHHHHHHHHHHHHHHHH---CTHHHHHHHHHHHHH
T ss_pred hhhhCCcceEEEEEcHHHHhhhcccCCcc--------cCCC-CCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHH
Confidence 99974 12799999999887654311111 0111 24567778888889987753 156788888888999
Q ss_pred HHHHHcc---CCceecCCCCCCCccceEEEEcCCC------------ch-hHHHHHHHHHcCCeecCCCCCCCeeEEeec
Q 043610 344 YNVIDGS---NGFYKCPVEKSVRSFMNVPFTLEKS------------DL-EAEFVKEAAKEKMVQLKGHRSVGGMRASIY 407 (430)
Q Consensus 344 ~~~l~~~---~G~~~~~~~~~~rs~~iv~f~~~~~------------~~-~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~ 407 (430)
++.|++. .++... +. ..+ ..+.+.+++. .. ..++.+.|.++||.+.++.. ..+|++
T Consensus 334 ~~~L~~~~~~~~~~~~-~~--~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~~~-- 405 (424)
T 2e7u_A 334 EAGLKEVLKEKGLPHT-VN--RVG-SMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSNF--EAAFLS-- 405 (424)
T ss_dssp HHHHHHHHHHTTCCCE-EE--EET-TEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSSS--SCEECC--
T ss_pred HHHHHHHHHhCCCceE-EE--eec-eEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccCC--CceEee--
Confidence 9888763 243211 01 123 3456676531 11 22688888889999877532 235655
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 043610 408 NAMPLAGVEKLVAFMKDF 425 (430)
Q Consensus 408 ~~~t~edv~~ll~~L~~~ 425 (430)
..++++|+++++++|+++
T Consensus 406 ~~~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 406 VAHREEDVEKTLEALRKA 423 (424)
T ss_dssp TTCCHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHh
Confidence 567999999999999875
No 227
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.67 E-value=7.4e-16 Score=157.88 Aligned_cols=329 Identities=8% Similarity=-0.010 Sum_probs=190.3
Q ss_pred CCCCceeecCCC-----CCCcHHHHHHHHHHhhhc-cCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEe
Q 043610 67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNW-RGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQ 140 (430)
Q Consensus 67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~ 140 (430)
..++.++|..|- +.-+|.|++++.+.+... ...+. .+ ++. ...+..+++.+.|+++++...+ +|+|+
T Consensus 61 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~-~~--~~~--~~~~l~~~la~~l~~~~~~~~~-~v~f~- 133 (472)
T 1ohv_A 61 DGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRP-AL--GIL--PPENFVEKLRESLLSVAPKGMS-QLITM- 133 (472)
T ss_dssp TSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCC-CT--TTS--CBTTHHHHHHHTGGGGCCTTCC-EEEEE-
T ss_pred CCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhccccccc-cc--ccc--cHHHHHHHHHHHHHHhCCCCcC-EEEEe-
Confidence 344455554432 224889999999876432 11121 11 110 1122334455555556654444 77775
Q ss_pred CcHHHHHHHHHhhcC-------------------------CCC---CcEEEEeCChhHHHHHHHH-------HHhC-Cc-
Q 043610 141 GGATTQFAAVPLNLC-------------------------TPN---DPVDYIVTGSWGDKAFKEA-------QKFC-NP- 183 (430)
Q Consensus 141 ~gaT~a~~~~~~sl~-------------------------~~g---d~vl~~~~g~~~~~~~~~a-------~~~g-~~- 183 (430)
+||++|++.++..+. .|| ++|++++.++.+....-.. +..+ ..
T Consensus 134 ~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~ 213 (472)
T 1ohv_A 134 ACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSF 213 (472)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCC
T ss_pred CCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCC
Confidence 789999998876652 145 7888777655443211000 0112 10
Q ss_pred --eEEecCCC-CcCCC---------CCCccccc--cCC------CccEEEEeecCCCccccCC------CCccc-cCCCc
Q 043610 184 --QVIWSGKA-EKYTK---------IPNFDALE--QNP------DAKYLHICANETIHGVEFK------EYPSA-KNSTG 236 (430)
Q Consensus 184 --~~v~~~~~-~~~g~---------~~d~~~l~--i~~------~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~ 236 (430)
..++.... -+... ..|+++|+ +++ ++++|++..+++++|.+.| +|.++ +++|+
T Consensus 214 ~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~ 293 (472)
T 1ohv_A 214 DWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGC 293 (472)
T ss_dssp CCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTC
T ss_pred CCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 11121100 00000 11455665 444 7899999888888998766 34554 58999
Q ss_pred EEEEeccCc-CCCCc--ccccc------ccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCC
Q 043610 237 ILVADMSSN-FCSKP--VDVTR------FGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNT 307 (430)
Q Consensus 237 ~lvvD~a~s-~G~~~--idl~~------~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T 307 (430)
++++|++|+ +|... +.++. .|++ +++|++ ..| |+++ ++++ .. ..+.. .+.+ .+
T Consensus 294 lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~--t~sK~~-l~G-G~~~-~~~~-~~---~~~~~--------~~~T-~~ 355 (472)
T 1ohv_A 294 AFLVDEVQTGGGSTGKFWAHEHWGLDDPADVM--TFSKKM-MTG-GFFH-KEEF-RP---NAPYR--------IFNT-WL 355 (472)
T ss_dssp EEEEECTTTTTTTTSSSSGGGGGCCSSCCSEE--EECGGG-SSE-EEEE-CGGG-SC---SSSSS--------SCCS-SS
T ss_pred EEEEeCcccCCCCCCCchhccccCCCCCCCEE--EEcccc-ccC-CccC-chhh-cc---ccccc--------ccCc-cC
Confidence 999999998 55432 23332 3554 556994 224 6655 5544 11 11110 0111 23
Q ss_pred ccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC-Cce-ecCCCCCCCccceEEEEcCCCchhHHHHHHH
Q 043610 308 PPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN-GFY-KCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA 385 (430)
Q Consensus 308 ~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~-G~~-~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L 385 (430)
.|...++++.++|+.+.+ +.+.++.++++++++++|.+.. ++. .+. ...... .++.|.+++.....++.+.|
T Consensus 356 ~~~~~~aaa~aal~~~~~----~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~-~~~~~g-~~~~~~~~~~~~~~~~~~~l 429 (472)
T 1ohv_A 356 GDPSKNLLLAEVINIIKR----EDLLSNAAHAGKVLLTGLLDLQARYPQFIS-RVRGRG-TFCSFDTPDESIRNKLISIA 429 (472)
T ss_dssp SCHHHHHHHHHHHHHHHH----TTHHHHHHHHHHHHHHHHHHHHHHCTTTCE-EEEEET-TEEEEECSSHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHHHHHHhhCCCcEE-eecCCc-eEEEEEeCChhHHHHHHHHH
Confidence 567788888899998764 2467888888888888887631 121 010 000122 34556665311123688889
Q ss_pred HHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 386 AKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 386 ~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
.++||.+.++. .+.|||++...++++||+++++.|++++++
T Consensus 430 ~~~Gv~~~~~g--~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 430 RNKGVMLGGCG--DKSIRFRPTLVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp HHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHCCeEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 88999987632 357999999999999999999999998764
No 228
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.66 E-value=5.1e-15 Score=146.97 Aligned_cols=348 Identities=14% Similarity=0.102 Sum_probs=207.8
Q ss_pred CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHH-HHHHHHHHHhCCCCCcE-EEEEeCcHHHH
Q 043610 69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIE-KAESDLRALLNIPQEYS-VLFLQGGATTQ 146 (430)
Q Consensus 69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~-~~r~~la~l~g~~~~~~-vv~~~~gaT~a 146 (430)
.+.+.+.+.--.+++.|++++...+.+-...|.-. ...+.+-++.+.+| -+.+..+++||++.... |=+-.-||+.|
T Consensus 54 ~~~ieLIASEN~~S~aV~~a~gS~ltnKYaEGyPg-~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~A 132 (490)
T 3ou5_A 54 CRGLELIASENFCSRAALEALGSCLNNKYSEGYPG-KRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPA 132 (490)
T ss_dssp HHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC-----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHH
T ss_pred HcCceEecCCCcCCHHHHHHhcCcccccccCCCCC-ccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHH
Confidence 35778888888899999999998887644444311 12222445555555 44677889999985421 22235689999
Q ss_pred HHHHHhhcCCCCCcEEEEeC---ChhHHHHHHHHHH---hC-CceEEecCCCCcCCCCCCccccc---cCCCccEEEEee
Q 043610 147 FAAVPLNLCTPNDPVDYIVT---GSWGDKAFKEAQK---FC-NPQVIWSGKAEKYTKIPNFDALE---QNPDAKYLHICA 216 (430)
Q Consensus 147 ~~~~~~sl~~~gd~vl~~~~---g~~~~~~~~~a~~---~g-~~~~v~~~~~~~~g~~~d~~~l~---i~~~~~lv~i~~ 216 (430)
+.+++.++++|||+|+-++. ||.++.......+ .| -...++..-+.+.+ .+|.|+++ ...++|+|++-.
T Consensus 133 N~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~-~IDyd~~~~~A~~~kPklIi~G~ 211 (490)
T 3ou5_A 133 NLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTG-LIDYNQLALTARLFRPRLIIAGT 211 (490)
T ss_dssp HHHHHHHHCC-CCCEECBC----------------------------CBCEETTTT-EECHHHHHHHHHHHCCSEEEECC
T ss_pred HHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCC-cccHHHHHHHHhhcCCCeEEECC
Confidence 99999999999999986543 3333321110111 12 11122221111233 58888886 345788888864
Q ss_pred cCCCccccCC--CCccc-cCCCcEEEEeccCcCC-----CCccccccccEEEeCCCccc-cCCccEEEEEcHHHHhccCC
Q 043610 217 NETIHGVEFK--EYPSA-KNSTGILVADMSSNFC-----SKPVDVTRFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQD 287 (430)
Q Consensus 217 ~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G-----~~~idl~~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~ 287 (430)
+..-..+| ++.++ .+.|+++++|++|-.| ..|-.+.-.|+++++.||.| ||.| |+++.+++.... .+
T Consensus 212 --SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtTTHKTLrGPrG-G~Il~~~~~~~~-~~ 287 (490)
T 3ou5_A 212 --SAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARS-GLIFYRKGVKAV-DP 287 (490)
T ss_dssp --SSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSSTTCSCSC-EEEEEECSEEEE-CC
T ss_pred --ccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccceEEeccccccccCCCc-eEEEeccccccc-cc
Confidence 32344555 56666 5889999999998544 44444555699999999999 8999 998887653211 00
Q ss_pred CC--Cccccccchhhc---CCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610 288 KT--PLMLDYKIHDEN---NSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV 362 (430)
Q Consensus 288 ~~--p~~~~~~~~~~~---~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~ 362 (430)
.. ....++....+. ....|.|-...+++.+.+|...... .+.+-.+...+.++.|.+.|.+ .|+.++. . ..
T Consensus 288 k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p-~fk~Ya~qVv~NAkaLA~~L~~-~G~~vvs-G-gT 363 (490)
T 3ou5_A 288 KTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTP-MFREYSLQVLKNARAMADALLE-RGYSLVS-G-GT 363 (490)
T ss_dssp --CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHH-TTCEEGG-G-SC
T ss_pred cccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHHHh-CCCeeec-C-CC
Confidence 00 000111111111 1122556666677777777654422 3566777777888888899986 8999874 1 11
Q ss_pred CccceEEEEcCCCchhH-HHHHHHHHcCCeec----CCCCC---CCeeEEeecC----CCCHHHHHHHHHHHHHHHH
Q 043610 363 RSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQL----KGHRS---VGGMRASIYN----AMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 363 rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~----~g~~~---~g~iRis~~~----~~t~edv~~ll~~L~~~~~ 427 (430)
.+ +.+.+.+.+.+... +..+.|.+.||.+- |+.++ .++|||+.-. -..++|++++.++|.+.+.
T Consensus 364 dn-HlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 364 DN-HLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp SS-SEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred Cc-eEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 22 45666765434444 56667888999853 33322 3579999644 3468999999999887653
No 229
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.64 E-value=1.1e-14 Score=148.11 Aligned_cols=313 Identities=11% Similarity=-0.016 Sum_probs=184.4
Q ss_pred CCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH
Q 043610 69 DRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA 143 (430)
Q Consensus 69 ~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga 143 (430)
+..++|..|- +..++.|++++.+.+.+.. .. .. ..+..+++.+.++++++ ..+ +|+++ +|+
T Consensus 57 ~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~--~~------~~---~~~~~~~la~~l~~~~~-~~~-~v~~~-~gg 122 (453)
T 2cy8_A 57 NVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGV--QY------AA---SHPLEVRWAERIVAAFP-SIR-KLRFT-GSG 122 (453)
T ss_dssp CEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTC--SS------CS---SCHHHHHHHHHHHHHCT-TCS-EEEEE-SCH
T ss_pred CEEEECcccHhhcccCCCCHHHHHHHHHHHHhCC--CC------CC---CCHHHHHHHHHHHhhCC-CCC-EEEEe-CCH
Confidence 4455665552 2368899999999885411 10 11 12345577778888876 444 77775 789
Q ss_pred HHHHHHHHhh---cCCCCCcEEEEeCChhHHHHHHH--H-H------HhC-Cc----eEEecCCCCcCCCCCCccccc--
Q 043610 144 TTQFAAVPLN---LCTPNDPVDYIVTGSWGDKAFKE--A-Q------KFC-NP----QVIWSGKAEKYTKIPNFDALE-- 204 (430)
Q Consensus 144 T~a~~~~~~s---l~~~gd~vl~~~~g~~~~~~~~~--a-~------~~g-~~----~~v~~~~~~~~g~~~d~~~l~-- 204 (430)
++|++.++.. +.+ +++|++++..+.+...... . . ..| .. .++.. ++ .|+++++
T Consensus 123 ~eA~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~---~d~~~le~~ 194 (453)
T 2cy8_A 123 TETTLLALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLI----RP---DDIEGMREV 194 (453)
T ss_dssp HHHHHHHHHHHHHHHC-CCEEEEECC----------------------------CGGGEEEE----CT---TCHHHHHHH
T ss_pred HHHHHHHHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeec----CC---CCHHHHHHH
Confidence 9999998887 444 5678877766554321100 0 0 012 10 11111 11 3666776
Q ss_pred cC---CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCcCCCC---cccccc----ccEEEeCCCccc
Q 043610 205 QN---PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSNFCSK---PVDVTR----FGVIYAGAQKNV 267 (430)
Q Consensus 205 i~---~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s~G~~---~idl~~----~d~~~~s~~K~~ 267 (430)
+. +++++|++..+++++|.+.| +|.++ +++|+++|+|++|+ |.. ...++. .|++ +++|++
T Consensus 195 l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~--s~sK~l 271 (453)
T 2cy8_A 195 FANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GFRVGNHGMQALLDVQPDLT--CLAKAS 271 (453)
T ss_dssp HHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTCTTHHHHHHTCCCSEE--EEEGGG
T ss_pred HHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-ccccCchhhhHHhCCCCcEE--EEChhh
Confidence 44 46778877776777998765 35554 58999999999997 321 111111 2544 677999
Q ss_pred cC-CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHH
Q 043610 268 GP-SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY-LLELGGLNEVEKMNRKKAELLYN 345 (430)
Q Consensus 268 gp-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~-l~~~~g~~~v~~~~~~l~~~l~~ 345 (430)
|+ ..+|++++++++++.+.+.... . ...+.+ .+.|...++++.++|+. + . +.+.++.+++++++++
T Consensus 272 ~~G~~~G~v~~~~~~~~~l~~~~~~-----~-~~~~~t-~~~n~~~~aa~~aal~~~~-~----~~~~~~~~~~~~~l~~ 339 (453)
T 2cy8_A 272 AGGLPGGILGGREDVMGVLSRGSDR-----K-VLHQGT-FTGNPITAAAAIAAIDTIL-E----DDVCAKINDLGQFARE 339 (453)
T ss_dssp GTTSSCEEEEECHHHHTTSSSCC----------------CCCCHHHHHHHHHHHHHHH-H----TTHHHHHHHHHHHHHH
T ss_pred hCCcceEEEechHHHHHHhccccCC-----C-ceeCCC-CCCCHHHHHHHHHHHHHHh-h----hhHHHHHHHHHHHHHH
Confidence 63 3489999999988765431000 0 000111 34677778888888886 5 3 2456777788888888
Q ss_pred HHHcc---CCceecCCCCCCCccceEEEEcCC-----C-------------ch-hHHHHHHHHHcCCeecCCCCCCCeeE
Q 043610 346 VIDGS---NGFYKCPVEKSVRSFMNVPFTLEK-----S-------------DL-EAEFVKEAAKEKMVQLKGHRSVGGMR 403 (430)
Q Consensus 346 ~l~~~---~G~~~~~~~~~~rs~~iv~f~~~~-----~-------------~~-~~~~~~~L~~~Gi~~~~g~~~~g~iR 403 (430)
.|.+. .++... .. ..+ ..+.+.+++ . .. ..++.+.|.++||.+.++ +.+|
T Consensus 340 ~L~~~~~~~~~~~~-~~--~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~~----~~~~ 411 (453)
T 2cy8_A 340 AMNHLFARKGLNWL-AY--GRF-SGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGGR----GSVF 411 (453)
T ss_dssp HHHHHHHHTTCCEE-EE--CCT-TEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECBTT----TEEE
T ss_pred HHHHHHhhCCCcEE-EE--Eee-eEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEeCC----CCEE
Confidence 88652 133111 11 123 356666653 1 11 236888888899998543 2366
Q ss_pred EeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 404 ASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 404 is~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
++ ..++++|+++++++|++++++
T Consensus 412 l~--~~~t~~~i~~~l~~l~~~l~~ 434 (453)
T 2cy8_A 412 LS--AQHEREHVEHLVTTFDRVLDR 434 (453)
T ss_dssp CC--TTCCHHHHHHHHHHHHHHHHH
T ss_pred ee--ccCCHHHHHHHHHHHHHHHHH
Confidence 54 567999999999999988754
No 230
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.54 E-value=1.1e-13 Score=139.41 Aligned_cols=294 Identities=12% Similarity=0.046 Sum_probs=178.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCC----CCcEEEEeCChhHHHHHHHHHHhC-CceE
Q 043610 111 KEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTP----NDPVDYIVTGSWGDKAFKEAQKFC-NPQV 185 (430)
Q Consensus 111 ~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~----gd~vl~~~~g~~~~~~~~~a~~~g-~~~~ 185 (430)
+....+-+.+..++.+++|.|.....+++ +|+|.+.++++++.+++ ++.|++..+.|.+. ...+.-.| .++.
T Consensus 94 ~~~~~~e~~~~~~~~~~lGlp~~~~~~lV-~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv--~kAl~l~Gl~p~~ 170 (450)
T 3bc8_A 94 SLLNKITNSLVLNVIKLAGVHSVASCFVV-PMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSC--FKSMVTAGFEPVV 170 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCCEEEEE-SSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHH--HHHHHHTTCEEEE
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCceEEEE-CCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHH--HHHHHHcCCeeEE
Confidence 44556777888999999999976444554 67776666666655443 78888888777663 23344457 7777
Q ss_pred EecCCCCcCCCCCCccccc--cC--C-CccEEEEeecCCC-ccccCC--CCccc-cCCCcEEEEeccCcCCCCcc-----
Q 043610 186 IWSGKAEKYTKIPNFDALE--QN--P-DAKYLHICANETI-HGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV----- 251 (430)
Q Consensus 186 v~~~~~~~~g~~~d~~~l~--i~--~-~~~lv~i~~~~t~-tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i----- 251 (430)
+....+.+.+ .+|++.|+ +. + +.+.++++++.+. +|.+-| +|+++ +++|++++||++|..-...+
T Consensus 171 v~~~~~~~~~-~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~ 249 (450)
T 3bc8_A 171 IENVLEGDEL-RTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQ 249 (450)
T ss_dssp ECCEEETTEE-ECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHH
T ss_pred EEeeecCccC-CcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHH
Confidence 7553211233 47888887 42 2 3445555554443 346666 78886 79999999999987543221
Q ss_pred ---ccccccEEEeCCCcccc-CCccEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHh
Q 043610 252 ---DVTRFGVIYAGAQKNVG-PSGVTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLEL 326 (430)
Q Consensus 252 ---dl~~~d~~~~s~~K~~g-p~G~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~ 326 (430)
+....|+++.|+|||+. |.|.++++++ ++.++.+.. .|. +....+|+ +.+..++..+- .
T Consensus 250 ~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~~---~~~--------g~~s~Sps----L~l~~~l~~~G-~ 313 (450)
T 3bc8_A 250 QGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISK---MYP--------GRASASPS----LDVLITLLSLG-C 313 (450)
T ss_dssp HHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHHH---HSC--------SCBCSHHH----HHHHHHHHHHH-H
T ss_pred HHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHHHH---Hhh--------cCCcccHH----HHHHHHHHHHH-H
Confidence 11356899999999995 9999999985 455544311 111 01111222 22233332222 2
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHccC---CceecCCCCCCCccceEEEEcCC----CchhH-HHHHHHHHcCC---eec--
Q 043610 327 GGLNEVEKMNRKKAELLYNVIDGSN---GFYKCPVEKSVRSFMNVPFTLEK----SDLEA-EFVKEAAKEKM---VQL-- 393 (430)
Q Consensus 327 ~g~~~v~~~~~~l~~~l~~~l~~~~---G~~~~~~~~~~rs~~iv~f~~~~----~~~~~-~~~~~L~~~Gi---~~~-- 393 (430)
.|+++..++..++++++++.|.+.. |++++.. +....+ ..+.+.. .+.+. ++.-.+...|+ .+.
T Consensus 314 ~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~-~~~~~~--~~~~l~~~~~~~~~D~tkl~i~~~~~g~sG~~v~~~ 390 (450)
T 3bc8_A 314 SGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQT-PHNPIS--LAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPL 390 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCC-TTCSSE--EEEECTTTSSSSSCHHHHHHHHHHHTTCCSCEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCC-ccCCCc--ceeecccccccccCCCceeEEEecCCCCccceeeec
Confidence 3677788888889999999998765 7777631 111111 2233321 12344 56666766553 222
Q ss_pred -----------CCCC------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610 394 -----------KGHR------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA 427 (430)
Q Consensus 394 -----------~g~~------~~g~iRis~~~~~t~edv~~ll~~L~~~~~ 427 (430)
..+. ...+|=+.+...++++|+++|+++|+++.+
T Consensus 391 ~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~ 441 (450)
T 3bc8_A 391 GNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLN 441 (450)
T ss_dssp CCEEEETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 1111 133566666667899999999999998754
No 231
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.24 E-value=1.8e-15 Score=154.28 Aligned_cols=318 Identities=10% Similarity=0.005 Sum_probs=190.4
Q ss_pred CCCCceeecCCCC--CC---cHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610 67 QEDRVFNFAAGPA--NL---PEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG 141 (430)
Q Consensus 67 ~~~~~~l~~~gp~--~~---~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ 141 (430)
+.++.++|..|.. .+ +|.|++++.+.+.+ +.+ .. -..+...++.+.|+++++ ..+ .++|+ +
T Consensus 98 dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~----~~~-----~~--~~~~~~~~Lae~L~~~~p-~~~-~v~~~-n 163 (465)
T 2yky_A 98 DGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAV----GLN-----LS--TQTENEALFAEAVCDRFP-SID-LVRFT-N 163 (465)
Confidence 3455666666553 23 78999999888754 111 11 112345577788888885 233 56665 7
Q ss_pred cHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHH--HHhC-CceEEecCCCCcCCCCCCccccc--cC---CCccE
Q 043610 142 GATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEA--QKFC-NPQVIWSGKAEKYTKIPNFDALE--QN---PDAKY 211 (430)
Q Consensus 142 gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a--~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~---~~~~l 211 (430)
||++|+..++... ...+++|++++.++.+....-.. ...| ...++.. ++ .|+++|+ ++ +++++
T Consensus 164 SGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~----~~---~d~~~l~~~l~~~~~~~aa 236 (465)
T 2yky_A 164 SGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLG----VY---NDVEGTADLLKRHGHDCAA 236 (465)
Confidence 8999999987764 24468888877666564321111 1112 1111221 12 2556666 44 67888
Q ss_pred EEEeecCCCccccCC------CCccc-cCCCcEEEEeccCcCCCCc--ccccccc--EEEeCCCccccCCc--cEEEEEc
Q 043610 212 LHICANETIHGVEFK------EYPSA-KNSTGILVADMSSNFCSKP--VDVTRFG--VIYAGAQKNVGPSG--VTIVIVR 278 (430)
Q Consensus 212 v~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s~G~~~--idl~~~d--~~~~s~~K~~gp~G--~g~l~v~ 278 (430)
|++..+.+++|.+.| +|.++ +++|+++++|++|+ +... .-.+.++ .-+.+++|++|. | +|+++++
T Consensus 237 vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pDi~t~sK~lg~-G~piG~v~~~ 314 (465)
T 2yky_A 237 ILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISADLTTLGKYIGG-GMSFGAFGGR 314 (465)
Confidence 888776677997765 35554 58999999999998 4211 1111111 123467899975 5 7899999
Q ss_pred HHHHhccCCC--CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC-Ccee
Q 043610 279 KDLLGNAQDK--TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN-GFYK 355 (430)
Q Consensus 279 ~~~~~~~~~~--~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~-G~~~ 355 (430)
+++++.+.+. .+.+. +.+ ++.|...++++.++|+.+.+ +.+.++..++.++++++|.+.. .+.+
T Consensus 315 ~~i~~~l~~~~~g~~~~--------~~T-~~~npla~aAa~aaL~~l~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~ 381 (465)
T 2yky_A 315 RDLMERFDPARDGAFAH--------AGT-FNNNILTMSAGHAALTQIYT----RQAASDLSASGDRFRANLNRIAVENQA 381 (465)
Confidence 9988765431 11110 011 24566677778888987753 3567788888888888887631 1211
Q ss_pred cCCCCCCCccceEEEEcCC-C------------chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHH
Q 043610 356 CPVEKSVRSFMNVPFTLEK-S------------DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFM 422 (430)
Q Consensus 356 ~~~~~~~rs~~iv~f~~~~-~------------~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L 422 (430)
.. +-.... ..+.|.+.+ . ....+|.+.|.++||++.++.. + . ++ ..++++||++++++|
T Consensus 382 ~~-~v~g~G-~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p~~~--~-~-~s--~~~t~edid~~l~~l 453 (465)
T 2yky_A 382 PL-QFTGLG-SLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLAPRGM--Y-A-LS--LEIADAGRDAFAEAL 453 (465)
Confidence 10 111122 234454442 0 0122577888889999876431 1 1 44 457999999999999
Q ss_pred HHHHHh
Q 043610 423 KDFQAK 428 (430)
Q Consensus 423 ~~~~~~ 428 (430)
++++++
T Consensus 454 ~~~l~~ 459 (465)
T 2yky_A 454 ADFIGE 459 (465)
Confidence 988764
No 232
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.43 E-value=3e-12 Score=127.72 Aligned_cols=285 Identities=12% Similarity=0.034 Sum_probs=178.5
Q ss_pred HHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCC----CCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcC
Q 043610 120 AESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTP----NDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKY 194 (430)
Q Consensus 120 ~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~----gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~ 194 (430)
+..+|+.+ |.+.. .-.|+++|+|.++.+++++.+++ +|.|++..+.|.+- +......| ++++++...+.+
T Consensus 122 ~ld~L~~~-G~~~~-~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv--~kAliL~Gl~Pv~V~p~~d~~- 196 (501)
T 3hl2_A 122 VLDIIKLA-GVHTV-ANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSC--FKSMITAGFEPVVIENVLEGD- 196 (501)
T ss_dssp HHHHHHHT-TCTTC-CEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHH--HHHHHHTTCEEEEECEEEETT-
T ss_pred HHHHHHHc-CCCCC-CcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHH--HHHHHHcCCeEEEEeeeeccc-
Confidence 34555555 99875 34555688898888888877653 49999988888773 23333457 777776532111
Q ss_pred CCCCCccccc--cC---CCccEEEEeecCCCcccc-CC--CCccc-cCCCcEEEEeccCcCCCCcc--------cccccc
Q 043610 195 TKIPNFDALE--QN---PDAKYLHICANETIHGVE-FK--EYPSA-KNSTGILVADMSSNFCSKPV--------DVTRFG 257 (430)
Q Consensus 195 g~~~d~~~l~--i~---~~~~lv~i~~~~t~tG~~-~p--ei~~~-~~~g~~lvvD~a~s~G~~~i--------dl~~~d 257 (430)
...+|++.++ +. ++..+++++.+++..|.. .| +|+++ +++|++++||++|..-.... ++...|
T Consensus 197 ~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD 276 (501)
T 3hl2_A 197 ELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRID 276 (501)
T ss_dssp EEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCC
T ss_pred ccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCc
Confidence 1246777776 42 244455555544443444 55 77776 69999999999887543221 122368
Q ss_pred EEEeCCCccc-cCCccEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 043610 258 VIYAGAQKNV-GPSGVTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKM 335 (430)
Q Consensus 258 ~~~~s~~K~~-gp~G~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~ 335 (430)
+++.|.||++ .|-|-++++.+ +++++.+.. .++||.+....+.+..++..+-. .|+.++.++
T Consensus 277 ~vVqS~HK~llvpIGG~ii~~~d~e~l~~~~~---------------~yPGr~S~Spsldl~~tLL~lGr-~Gy~~ll~e 340 (501)
T 3hl2_A 277 AFVQSLDKNFMVPVGGAIIAGFNDSFIQEISK---------------MYPGRASASPSLDVLITLLSLGS-NGYKKLLKE 340 (501)
T ss_dssp EEEEEHHHHHCCCSSCEEEEESCHHHHHHHHH---------------TSCSCBCSHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred EEEecccccceeecCceEEEeCCHHHHHHHHH---------------hCCCCCCCcHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 9999999999 58785666554 456665321 12244444444544444444443 378999999
Q ss_pred HHHHHHHHHHHHHcc---CCceecCCCCCCCccceEEEEcCCC----chhH-HHHHHHHHcCCe---ec-CC--------
Q 043610 336 NRKKAELLYNVIDGS---NGFYKCPVEKSVRSFMNVPFTLEKS----DLEA-EFVKEAAKEKMV---QL-KG-------- 395 (430)
Q Consensus 336 ~~~l~~~l~~~l~~~---~G~~~~~~~~~~rs~~iv~f~~~~~----~~~~-~~~~~L~~~Gi~---~~-~g-------- 395 (430)
..++.++++++|++. .|-+++. .+ ..+.-+.+.+... +... +|-.+|-..+|- +. +|
T Consensus 341 ~~ela~~L~~~L~~la~~~ge~ll~-~~--~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~ 417 (501)
T 3hl2_A 341 RKEMFSYLSNQIKKLSEAYNERLLH-TP--HNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGY 417 (501)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCBCC-CT--TCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTE
T ss_pred HHHHHHHHHHHHHHHHHhcChhhcC-CC--CCceeEEEecccccccccccHHHHHHHHHhcCCCcceeecCCCceEECCe
Confidence 999999999999984 3445542 11 1233355555421 1122 567778776554 11 11
Q ss_pred ----CC------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 396 ----HR------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 396 ----~~------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
++ ...++-+....-++++|||.+++.|++++..
T Consensus 418 ~f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~ 460 (501)
T 3hl2_A 418 TFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKA 460 (501)
T ss_dssp EESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 11 1236888877788999999999999998754
No 233
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.20 E-value=3.1e-09 Score=107.94 Aligned_cols=322 Identities=13% Similarity=0.028 Sum_probs=175.2
Q ss_pred CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc--CCCC
Q 043610 81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--CTPN 158 (430)
Q Consensus 81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl--~~~g 158 (430)
-+|.|.+++++++.+..... . ...... ...++.+.|.+++..+.-..++|+ +|||||++.++.-. ....
T Consensus 81 ~~p~v~~Ai~~q~~~~~~~~--~--~~~~~~----~~~~lae~L~~~~p~~~~~~v~f~-~sGsEA~e~AlklAr~~t~r 151 (456)
T 4atq_A 81 SDPAVVAAVQEAAAHFTHTC--F--MVTPYE----GYVAVTEQLNRLTPGDHAKRTVLF-NSGAEAVENAVKVARLATGR 151 (456)
T ss_dssp TCHHHHHHHHHHHHHCSCCT--T--TTSCCH----HHHHHHHHHHHHSSCSSCEEEEEE-SSHHHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHhhccCcc--c--CccCcH----HHHHHHHHHHHhCCCCCCcEEEEe-CChHHHHHHHHHHHhhhhcC
Confidence 47899999999887532110 0 111111 222455667777754432256665 78999999876543 2334
Q ss_pred CcEEEEeCChhHHHHHHHHHH---------hC----CceEEecCCCCc--CCCCCCcccc-------c--cC-CCccEEE
Q 043610 159 DPVDYIVTGSWGDKAFKEAQK---------FC----NPQVIWSGKAEK--YTKIPNFDAL-------E--QN-PDAKYLH 213 (430)
Q Consensus 159 d~vl~~~~g~~~~~~~~~a~~---------~g----~~~~v~~~~~~~--~g~~~d~~~l-------~--i~-~~~~lv~ 213 (430)
.+++.+..++.|.-..-.... .+ .+..++...+.. ..+..+.+.+ + +. +++..|+
T Consensus 152 ~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvi 231 (456)
T 4atq_A 152 DAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAII 231 (456)
T ss_dssp CEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEE
T ss_pred CeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEE
Confidence 567766666555311111100 01 122233221100 0000111111 1 12 2455566
Q ss_pred EeecCCCccccCC------CCccc-cCCCcEEEEeccCcC-CCC--ccccccc----cEEEeCCCcccc--CCccEEEEE
Q 043610 214 ICANETIHGVEFK------EYPSA-KNSTGILVADMSSNF-CSK--PVDVTRF----GVIYAGAQKNVG--PSGVTIVIV 277 (430)
Q Consensus 214 i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s~-G~~--~idl~~~----d~~~~s~~K~~g--p~G~g~l~v 277 (430)
+=-+....|++.| ++.++ +++|+++|+|++|.- |-. .+-.+.+ |+++.+ |.+| .+ +|.+.+
T Consensus 232 vEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~g--K~lggg~P-~~av~~ 308 (456)
T 4atq_A 232 IEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMA--KGIAGGLP-LSAITG 308 (456)
T ss_dssp ECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEEC--GGGGTTSS-CEEEEE
T ss_pred eccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhhh--hcccCcCC-ceeeEe
Confidence 6445666788877 24554 599999999999873 321 1222222 777665 7773 32 688888
Q ss_pred cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc---CCce
Q 043610 278 RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS---NGFY 354 (430)
Q Consensus 278 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~---~G~~ 354 (430)
++++.+...+ .. .+.++ +-|..+..++.++|+.++++ + +.++.+++.+++++.|++. ....
T Consensus 309 ~~~i~~~~~~---~~--------~~~Tf-~gnpla~aaala~L~~i~~~-~---l~~~~~~~g~~l~~~L~~l~~~~~~~ 372 (456)
T 4atq_A 309 RADLLDAVHP---GG--------LGGTY-GGNPVACAAALAAIDTMEQH-D---LNGRARHIEELALGKLRELAAELSAG 372 (456)
T ss_dssp EHHHHTTSCT---TS--------SCCSS-SSCHHHHHHHHHHHHHHHHT-T---HHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred cHHHHhcccc---cC--------CCCCC-CCChHHHHhhHHHHHHHhhc-c---HHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 9998775432 11 12233 34666778888899988753 3 4555566666666666542 1100
Q ss_pred ecCCCCCCCc-cceEEEEcCCC-------chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610 355 KCPVEKSVRS-FMNVPFTLEKS-------DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426 (430)
Q Consensus 355 ~~~~~~~~rs-~~iv~f~~~~~-------~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~ 426 (430)
..+.-.+.|. ...+.+.+.+. ....++...+.++|+++.........||+.+-...|++|++++++.|++.+
T Consensus 373 ~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~~~~~irl~PpL~it~~~id~~l~~l~~al 452 (456)
T 4atq_A 373 GGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTCGTYGNVIRLLPPLVISDELLIDGLEVLAAAI 452 (456)
T ss_dssp ---CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred cCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 0000001121 12334444211 112257788889999875421123469999988889999999999999999
Q ss_pred HhhC
Q 043610 427 AKHA 430 (430)
Q Consensus 427 ~~~~ 430 (430)
+.+|
T Consensus 453 ~a~A 456 (456)
T 4atq_A 453 KAHA 456 (456)
T ss_dssp HHC-
T ss_pred HhhC
Confidence 8875
No 234
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.17 E-value=1.6e-10 Score=117.11 Aligned_cols=316 Identities=12% Similarity=0.049 Sum_probs=175.7
Q ss_pred CCCCCceeecCC--CCC---CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEe
Q 043610 66 GQEDRVFNFAAG--PAN---LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQ 140 (430)
Q Consensus 66 ~~~~~~~l~~~g--p~~---~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~ 140 (430)
.+.++.+.+..| +.. -+|.|++++.+.+.+....+. + .. ...++.+.|++.+..- + .+.|+
T Consensus 84 ~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~~~~------~--~~---~~~~lae~l~~~~p~~-~-~v~f~- 149 (454)
T 4ao9_A 84 ADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINLTG------H--NL---LEGRLARLICERFPQI-E-QLRFT- 149 (454)
T ss_dssp TTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSCCCS------E--ES---SHHHHHHHHHHHSTTC-S-EEEEE-
T ss_pred CCCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCCccC------C--cH---HHHHHHHHHHHhCCCC-C-EEEEe-
Confidence 344444445444 322 478999999998864211110 0 11 1225566777777532 2 67765
Q ss_pred CcHHHHHHHHHhhcC--CCCCcEEEEeCChhHHHHHHHHHHhC----CceEEecCCCCcCCCCCCccccc--c---CCCc
Q 043610 141 GGATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFC----NPQVIWSGKAEKYTKIPNFDALE--Q---NPDA 209 (430)
Q Consensus 141 ~gaT~a~~~~~~sl~--~~gd~vl~~~~g~~~~~~~~~a~~~g----~~~~v~~~~~~~~g~~~d~~~l~--i---~~~~ 209 (430)
+|||||++.++.-.. ...++|+.+..++.|.... .....+ ....... ++ -|.+.++ + .+++
T Consensus 150 ~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~-~~~~~~~~~~~~~~~~~----p~---nd~~~l~~~l~~~~~~i 221 (454)
T 4ao9_A 150 NSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLG-FGARPSPTTVPFDFLVL----PY---NDAQTARAQIERHGPEI 221 (454)
T ss_dssp SSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCB-BSSSBCTTSCCSEEEEE----CT---TCHHHHHHHHHHTGGGE
T ss_pred CchHHHHHHHHHHHHhcccCCeEEEEeCCcCCcccc-ccccccCccCCCCcccC----CC---chHHHHHHHHhhcCCce
Confidence 789999998766532 2345677666555442100 000001 0111111 12 2334443 2 3566
Q ss_pred cEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCcCCCCc--ccccc----ccEEEeCCCcccc-CCccEEE
Q 043610 210 KYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSNFCSKP--VDVTR----FGVIYAGAQKNVG-PSGVTIV 275 (430)
Q Consensus 210 ~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s~G~~~--idl~~----~d~~~~s~~K~~g-p~G~g~l 275 (430)
.+|++--+....|++.| +|.++ +++|+++|+|+++. |-.- .-.+. -|++ +..|.+| -.-+|.+
T Consensus 222 AavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv~PDi~--t~gK~lggG~Piga~ 298 (454)
T 4ao9_A 222 AVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMT-SRLAPHGLANKLGIRSDLT--TLGKYIGGGMSFGAF 298 (454)
T ss_dssp EEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTG-GGGSTTCHHHHHTCCCSEE--EEEGGGGTTSSCEEE
T ss_pred EEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCc-CCCccccchhccCCCCcEE--EeccccCCCCcceee
Confidence 77777556667788877 35554 58999999999987 4210 10111 2555 4568883 2237888
Q ss_pred EEcHHHHhccCCC-CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc---C
Q 043610 276 IVRKDLLGNAQDK-TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS---N 351 (430)
Q Consensus 276 ~v~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~---~ 351 (430)
..++++.+...+. .+.+. +.++ +-|.....+..++|+.+.+ +++.++..++.++|+++|++. .
T Consensus 299 ~~~~ei~~~~~~~~~~~~h--------~~T~-~gnPla~AAala~L~~l~~----~~~~~~~~~~g~~l~~~L~~l~~~~ 365 (454)
T 4ao9_A 299 GGRADVMALFDPRTGPLAH--------SGTF-NNNVMTMAAGYAGLTKLFT----PEAAGALAERGEALRARLNALCANE 365 (454)
T ss_dssp EECHHHHGGGCTTTCSCCC--------CCTT-TTCHHHHHHHHHHHHHTSC----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeHHHHHHHHhhccCCccc--------cCCC-CCCHHHHHHHHHHHHHHhc----cChhHHHHHHHHHHHHHHHHHHhhC
Confidence 9999998876442 12211 1222 3456677777788887653 456677777777777777652 1
Q ss_pred CceecCCCCCCCccceEEEEcCCC-----------c--hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHH
Q 043610 352 GFYKCPVEKSVRSFMNVPFTLEKS-----------D--LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKL 418 (430)
Q Consensus 352 G~~~~~~~~~~rs~~iv~f~~~~~-----------~--~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~l 418 (430)
++.. +-.... ..+.+.+.+. + ....+...|.++||+..+. +.+.+++ .+|++|||++
T Consensus 366 ~~~~---~vrg~G-~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~Gv~~~p~----~~~~~s~--~~T~~dId~~ 435 (454)
T 4ao9_A 366 GVAM---QFTGIG-SLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLNEDIYSSPR----GFVVLSL--PLTDADIDRY 435 (454)
T ss_dssp TBSC---EEEEET-TEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHHTTEECCTT----CEEECCT--TCCHHHHHHH
T ss_pred CCCE---EEeeec-eEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHHCCEEEcCC----CCEEEeC--CCCHHHHHHH
Confidence 2110 000011 1233333110 0 1123666778899987652 2344444 4699999999
Q ss_pred HHHHHHHHHhh
Q 043610 419 VAFMKDFQAKH 429 (430)
Q Consensus 419 l~~L~~~~~~~ 429 (430)
+++|++++.++
T Consensus 436 l~al~~~l~~~ 446 (454)
T 4ao9_A 436 VAAIGSFIGGH 446 (454)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHhc
Confidence 99999998865
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=98.89 E-value=1.1e-07 Score=96.75 Aligned_cols=336 Identities=9% Similarity=-0.000 Sum_probs=177.9
Q ss_pred CCCCceeecCCCCC-----CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610 67 QEDRVFNFAAGPAN-----LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG 141 (430)
Q Consensus 67 ~~~~~~l~~~gp~~-----~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ 141 (430)
..++.+.+..|-.. -+|.|.+++.+++.+....+. + ....... ..++.+.|.++...+-+ .|+|. +
T Consensus 65 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~--~-~~~~~~~----~~~lAe~L~~~~p~~~~-~v~f~-~ 135 (473)
T 4e3q_A 65 NGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFPGYHA--F-FGRMSDQ----TVMLSEKLVEVSPFDSG-RVFYT-N 135 (473)
T ss_dssp TCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCCCCCC--C-TTEEEHH----HHHHHHHHHHHSSCSSC-EEEEE-S
T ss_pred CCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcccccc--c-ccccCHH----HHHHHHHHHhhCCCCcc-EEEEe-C
Confidence 34444455555422 378999999998875321111 0 0001121 22455667777765543 66665 8
Q ss_pred cHHHHHHHHHhhc-------CCCCC-cEEEEeCChhHHHHHHHH-------HHhC----CceEEecCCCCcCCCCCCc--
Q 043610 142 GATTQFAAVPLNL-------CTPND-PVDYIVTGSWGDKAFKEA-------QKFC----NPQVIWSGKAEKYTKIPNF-- 200 (430)
Q Consensus 142 gaT~a~~~~~~sl-------~~~gd-~vl~~~~g~~~~~~~~~a-------~~~g----~~~~v~~~~~~~~g~~~d~-- 200 (430)
|||||++.++.-. -+++. +++....+|.|.-..... +..+ ....++....-.++..-+.
T Consensus 136 sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 215 (473)
T 4e3q_A 136 SGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEE 215 (473)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHH
T ss_pred chHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhh
Confidence 9999999876532 12343 455555555442111111 0111 1111111100000000000
Q ss_pred -------cccc--c----CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--cccccc--
Q 043610 201 -------DALE--Q----NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTR-- 255 (430)
Q Consensus 201 -------~~l~--i----~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~-- 255 (430)
++++ + .+++.+|++--+....|++.| ++.++ +++|+++|+|+++. ||-. .+-.+.
T Consensus 216 ~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~g 295 (473)
T 4e3q_A 216 QFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYD 295 (473)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTT
T ss_pred HHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcC
Confidence 1122 1 124556666556677788877 24554 69999999999986 4321 111122
Q ss_pred --ccEEEeCCCccc--cCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHH
Q 043610 256 --FGVIYAGAQKNV--GPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNE 331 (430)
Q Consensus 256 --~d~~~~s~~K~~--gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~ 331 (430)
-|+++. .|.+ |..=+|.+.+++++.+...+.. ..+.. ...+.++ +-|..+..++.++|+.++++ .
T Consensus 296 v~PDi~t~--~K~l~gG~~Pl~av~~~~~i~~~~~~~~---~~~~~-~~hg~T~-~Gnpla~Aaala~L~~i~~~----~ 364 (473)
T 4e3q_A 296 FTPDAIIS--SKNLTAGFFPMGAVILGPELSKRLETAI---EAIEE-FPHGFTA-SGHPVGCAIALKAIDVVMNE----G 364 (473)
T ss_dssp CCCSEEEE--CGGGGTTSSCCEEEEECHHHHHHHHHHH---HHHSC-CCCCCTT-TTCHHHHHHHHHHHHHHHHS----S
T ss_pred CCCChHHh--cccccCCCCCcccccccHHHHHHhcccc---ccccc-cccCCCC-CCCcchhhhhhhhhhhhccc----c
Confidence 266654 5888 3222788899999876532100 00000 0012232 44666777788889988753 3
Q ss_pred HHHHHHHHHHHHHHHHHccCCceecCCCCCCCcc-ceEEEEcC-CC----------chhHHHHHHHHHcCCeecCCCCCC
Q 043610 332 VEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF-MNVPFTLE-KS----------DLEAEFVKEAAKEKMVQLKGHRSV 399 (430)
Q Consensus 332 v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~-~iv~f~~~-~~----------~~~~~~~~~L~~~Gi~~~~g~~~~ 399 (430)
+.++.+++.++++++|++......+. +.|.- ..+.+.+. +. .....+.+.+.++|+++.+..
T Consensus 365 l~~~~~~~g~~l~~~L~~l~~~~~v~---~vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g--- 438 (473)
T 4e3q_A 365 LAENVRRLAPRFEERLKHIAERPNIG---EYRGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPLG--- 438 (473)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTEE---EEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEET---
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCee---EEeecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEecC---
Confidence 55566666777777776532111110 11211 22334331 10 112257788889999875421
Q ss_pred CeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 400 GGMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 400 g~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
..+|+++-...|++|+|++++.|++.+++
T Consensus 439 ~~i~l~PPL~it~~eid~~~~~l~~al~~ 467 (473)
T 4e3q_A 439 QSVVLCPPFILTEAQMDEMFDKLEKALDK 467 (473)
T ss_dssp TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 36999988888999999999998887754
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.75 E-value=4.8e-08 Score=106.13 Aligned_cols=201 Identities=8% Similarity=0.034 Sum_probs=116.4
Q ss_pred ccEEEEeec-CCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccccc----cEEEeCCCccccCCc--
Q 043610 209 AKYLHICAN-ETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTRF----GVIYAGAQKNVGPSG-- 271 (430)
Q Consensus 209 ~~lv~i~~~-~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~----d~~~~s~~K~~gp~G-- 271 (430)
+.+|++=-+ .+..|++.+ +|.++ +++|+++|+|+++. +|-. .+-.+.+ |++ +..|.+|- |
T Consensus 595 iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDii--tlsK~L~g-G~~ 671 (831)
T 4a0g_A 595 VGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIA--CFAKLLTG-GMV 671 (831)
T ss_dssp EEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEE--EECGGGGT-TSS
T ss_pred EEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEE--EEeccccc-Ccc
Confidence 445555333 566788775 34554 58999999999876 5421 1211222 555 57899943 3
Q ss_pred -cEEEEEcHHHHhccCCCCCc-cccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCH-HHHHHHHHHH----HHHHH
Q 043610 272 -VTIVIVRKDLLGNAQDKTPL-MLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGL-NEVEKMNRKK----AELLY 344 (430)
Q Consensus 272 -~g~l~v~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~-~~v~~~~~~l----~~~l~ 344 (430)
+|++.+++++.+.+.+.... .+ ..+.+ ++.|....+++.++|+.++++ ++ +.+.+....+ .+.+.
T Consensus 672 Plgav~~~~~i~~~~~~~~~~~~~------~hg~T-~~g~Pla~Aaala~L~~i~~~-~l~~~~~~~~~~l~~~l~~~l~ 743 (831)
T 4a0g_A 672 PLAVTLATDAVFDSFSGDSKLKAL------LHGHS-YSAHAMGCATAAKAIQWFKDP-ETNHNITSQGKTLRELWDEELV 743 (831)
T ss_dssp CCEEEEECHHHHHTTCSSCGGGSC------CCCCT-TTTCHHHHHHHHHHHHHHHCT-TTCTTBCTTSSBBCCCSCHHHH
T ss_pred CcEEEEECHHHHHHHhcccccccc------eeecC-CcccHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999988765321100 00 01122 345667778888899987642 22 1221111121 12344
Q ss_pred HHHHccCCceecCCCCCCCccceEEEEcCCC--------chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHH
Q 043610 345 NVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS--------DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVE 416 (430)
Q Consensus 345 ~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~--------~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~ 416 (430)
+.+.+...+..+. ... .++.+.+.+. ....++.+.|.++||++.+.. +.||+++...++++||+
T Consensus 744 ~~l~~~~~v~~vr----g~G-l~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p~g---~~lrl~pp~~~t~e~id 815 (831)
T 4a0g_A 744 QQISSHSAVQRVV----VIG-TLFALELKADASNSGYASLYAKSLLIMLREDGIFTRPLG---NVIYLMCGPCTSPEICR 815 (831)
T ss_dssp HHHHHSTTEEEEE----EET-TEEEEEEC---------CHHHHHHHHHHHHTTEECCCBT---TEEEEECCTTCCHHHHH
T ss_pred HHHhhCCCceeEe----ecc-cEEEEEEecCccccccchHHHHHHHHHHHHCCcEEEecC---CEEEEECCCCCCHHHHH
Confidence 4454432222110 112 2344444321 112258888999999987532 47999988888999999
Q ss_pred HHHHHHHHHHHh
Q 043610 417 KLVAFMKDFQAK 428 (430)
Q Consensus 417 ~ll~~L~~~~~~ 428 (430)
++++.|++++++
T Consensus 816 ~~~~~l~~~l~~ 827 (831)
T 4a0g_A 816 RLLTKLYKRLGE 827 (831)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 237
>2llz_A Uncharacterized protein YJDK; RNAse, biofilm, unknown function; NMR {Escherichia coli}
Probab=26.29 E-value=1.3e+02 Score=22.85 Aligned_cols=59 Identities=12% Similarity=0.093 Sum_probs=41.1
Q ss_pred ceEEEEcCCCchhH--HHHHHHHHcCCeec----CCCC-CCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610 366 MNVPFTLEKSDLEA--EFVKEAAKEKMVQL----KGHR-SVGGMRASIYNAMPLAGVEKLVAFMKD 424 (430)
Q Consensus 366 ~iv~f~~~~~~~~~--~~~~~L~~~Gi~~~----~g~~-~~g~iRis~~~~~t~edv~~ll~~L~~ 424 (430)
.+|+|.+...++.. ++-..|...|+... .|.. ..|.-.+++.-.-+++||++++..|.+
T Consensus 12 YVVTf~y~e~~Lt~~~eL~~~lt~aGF~ttl~D~~G~pHeLgtNsFgliS~l~~~ev~~La~~L~e 77 (100)
T 2llz_A 12 YVVSFDYPSSYSSVFLRLRSLMYDMNFSSIVADEYGIPRQLNENSFAITTSLAASEIEDLIRLKCL 77 (100)
T ss_dssp EEEEEECCGGGHHHHHHHHHHHHHTTEESEEECSSSCEEECTTTEEEECCCSCHHHHHHHHHHGGG
T ss_pred EEEEEEecccchHHHHHHHHHHHhCCceeEeecCCCCceeccccceeeeccCCHHHHHHHHHHHHH
Confidence 57889988644443 46667778888732 2332 356677887777789999999987754
No 238
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=25.86 E-value=1.2e+02 Score=19.80 Aligned_cols=27 Identities=30% Similarity=0.261 Sum_probs=21.3
Q ss_pred eeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610 401 GMRASIYNAMPLAGVEKLVAFMKDFQAK 428 (430)
Q Consensus 401 ~iRis~~~~~t~edv~~ll~~L~~~~~~ 428 (430)
.+|||+. ..+..+-+++...|.++.+.
T Consensus 3 rvrisit-artkkeaekfaailikvfae 29 (62)
T 2gjh_A 3 RVRISIT-ARTKKEAEKFAAILIKVFAE 29 (62)
T ss_dssp EEEEEEE-CSSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEE-ecchhHHHHHHHHHHHHHHH
Confidence 5899987 46788899999888876553
Done!