Your job contains 1 sequence.
>043613
MAFTQHGRNALRQITKESSDRVLHHPLLFSCQGVKYRRLEVILTTKVDKLGKVGETVKVA
PGYFHNHLMPKLLAVLNIEKFAHLIREQRR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043613
(90 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2168377 - symbol:AT5G53070 species:3702 "Arabi... 314 3.9e-28 1
TIGR_CMR|GSU_0668 - symbol:GSU_0668 "ribosomal protein L9... 110 1.6e-06 1
UNIPROTKB|P66315 - symbol:rplI "50S ribosomal protein L9"... 99 2.4e-05 1
TIGR_CMR|CHY_0039 - symbol:CHY_0039 "ribosomal protein L9... 97 3.9e-05 1
TIGR_CMR|CPS_0418 - symbol:CPS_0418 "ribosomal protein L9... 89 0.00027 1
UNIPROTKB|Q9KUY9 - symbol:rplI "50S ribosomal protein L9"... 84 0.00097 1
TIGR_CMR|VC_0369 - symbol:VC_0369 "ribosomal protein L9" ... 84 0.00097 1
>TAIR|locus:2168377 [details] [associations]
symbol:AT5G53070 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000244 Pfam:PF01281
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 KO:K02939 Gene3D:3.10.430.100 Gene3D:3.40.5.10
InterPro:IPR009027 InterPro:IPR020069 InterPro:IPR020070
PANTHER:PTHR21368 Pfam:PF03948 SUPFAM:SSF55658 SUPFAM:SSF55653
EMBL:AB018116 eggNOG:NOG277901 UniGene:At.27262 EMBL:BT002884
EMBL:BT004396 IPI:IPI00519351 RefSeq:NP_200119.1
ProteinModelPortal:Q9LVU5 SMR:Q9LVU5 PaxDb:Q9LVU5 PRIDE:Q9LVU5
EnsemblPlants:AT5G53070.1 GeneID:835387 KEGG:ath:AT5G53070
TAIR:At5g53070 HOGENOM:HOG000006313 InParanoid:Q9LVU5 OMA:PGYFRNH
PhylomeDB:Q9LVU5 ProtClustDB:CLSN2686155 ArrayExpress:Q9LVU5
Genevestigator:Q9LVU5 Uniprot:Q9LVU5
Length = 221
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 59/95 (62%), Positives = 74/95 (77%)
Query: 1 MAFTQHGRNALRQITKESS-----DRVLHHPLLFSCQGVKYRRLEVILTTKVDKLGKVGE 55
MA+ RN +R + + + +HHPLLF+CQGV+YR+LEVILTT ++KLGK GE
Sbjct: 1 MAYVGQSRNVIRHVVSRGTAYHKYENAIHHPLLFACQGVRYRKLEVILTTGIEKLGKAGE 60
Query: 56 TVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQRR 90
TVKVAPGYF NHLMPKLLAV NI+K+A+LIREQR+
Sbjct: 61 TVKVAPGYFRNHLMPKLLAVPNIDKYAYLIREQRK 95
>TIGR_CMR|GSU_0668 [details] [associations]
symbol:GSU_0668 "ribosomal protein L9" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] HAMAP:MF_00503
InterPro:IPR000244 InterPro:IPR020594 Pfam:PF01281 GO:GO:0006412
GO:GO:0005840 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
GO:GO:0019843 eggNOG:COG0359 HOGENOM:HOG000040337 KO:K02939
Gene3D:3.10.430.100 Gene3D:3.40.5.10 InterPro:IPR009027
InterPro:IPR020069 InterPro:IPR020070 PANTHER:PTHR21368
Pfam:PF03948 SUPFAM:SSF55658 SUPFAM:SSF55653 TIGRFAMs:TIGR00158
PROSITE:PS00651 ProtClustDB:PRK00137 OMA:TGIYEIE RefSeq:NP_951725.1
ProteinModelPortal:Q74FE1 GeneID:2685560 KEGG:gsu:GSU0668
PATRIC:22024095 BioCyc:GSUL243231:GH27-687-MONOMER Uniprot:Q74FE1
Length = 148
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQRR 90
++VIL V+ LG +G+ VKVAPGY N+L+P+ A+ EK A + +R
Sbjct: 1 MKVILKENVENLGHIGDIVKVAPGYARNYLIPRNFAIEATEKNAKALEHAKR 52
>UNIPROTKB|P66315 [details] [associations]
symbol:rplI "50S ribosomal protein L9" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] HAMAP:MF_00503 InterPro:IPR000244 InterPro:IPR000644
InterPro:IPR020594 SMART:SM00116 Pfam:PF01281 GO:GO:0005829
GO:GO:0005886 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 EMBL:BX842572 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 eggNOG:COG0359 HOGENOM:HOG000040337
KO:K02939 Gene3D:3.10.430.100 Gene3D:3.40.5.10 InterPro:IPR009027
InterPro:IPR020069 InterPro:IPR020070 PANTHER:PTHR21368
Pfam:PF03948 SUPFAM:SSF55658 SUPFAM:SSF55653 TIGRFAMs:TIGR00158
PROSITE:PS00651 ProtClustDB:PRK00137 OMA:ITVPDIH PIR:H70913
RefSeq:NP_214570.1 RefSeq:NP_334470.1 RefSeq:YP_006513370.1
ProteinModelPortal:P66315 SMR:P66315 PRIDE:P66315
EnsemblBacteria:EBMYCT00000002727 EnsemblBacteria:EBMYCT00000069293
GeneID:13316034 GeneID:887010 GeneID:922725 KEGG:mtc:MT0062
KEGG:mtu:Rv0056 KEGG:mtv:RVBD_0056 PATRIC:18121857
TubercuList:Rv0056 Uniprot:P66315
Length = 152
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVL---NIEKFAHLIREQR 89
+++ILT VD LG +G+TV+V GY N L+P+ LA++ +K A IR R
Sbjct: 1 MKLILTADVDHLGSIGDTVEVKDGYGRNFLLPRGLAIVASRGAQKQADEIRRAR 54
>TIGR_CMR|CHY_0039 [details] [associations]
symbol:CHY_0039 "ribosomal protein L9" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] HAMAP:MF_00503 InterPro:IPR000244 InterPro:IPR020594
Pfam:PF01281 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 eggNOG:COG0359 KO:K02939
Gene3D:3.10.430.100 Gene3D:3.40.5.10 InterPro:IPR009027
InterPro:IPR020069 InterPro:IPR020070 PANTHER:PTHR21368
Pfam:PF03948 SUPFAM:SSF55658 SUPFAM:SSF55653 TIGRFAMs:TIGR00158
PROSITE:PS00651 HOGENOM:HOG000040336 OMA:ITVPDIH RefSeq:YP_358911.1
ProteinModelPortal:Q3AG23 STRING:Q3AG23 GeneID:3728530
KEGG:chy:CHY_0039 PATRIC:21273275 BioCyc:CHYD246194:GJCN-39-MONOMER
Uniprot:Q3AG23
Length = 151
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQR 89
++VIL T+V KLGK G+ V+VA GY N+L+ K LAV E +++Q+
Sbjct: 1 MKVILLTEVKKLGKKGDVVEVAEGYGRNYLIAKGLAVEATEGKLKELQQQK 51
>TIGR_CMR|CPS_0418 [details] [associations]
symbol:CPS_0418 "ribosomal protein L9" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] HAMAP:MF_00503
InterPro:IPR000244 InterPro:IPR020594 Pfam:PF01281 GO:GO:0006412
GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735
GO:GO:0019843 eggNOG:COG0359 HOGENOM:HOG000040337 KO:K02939
Gene3D:3.10.430.100 Gene3D:3.40.5.10 InterPro:IPR009027
InterPro:IPR020069 InterPro:IPR020070 PANTHER:PTHR21368
Pfam:PF03948 SUPFAM:SSF55658 SUPFAM:SSF55653 TIGRFAMs:TIGR00158
PROSITE:PS00651 RefSeq:YP_267176.1 ProteinModelPortal:Q489T8
SMR:Q489T8 STRING:Q489T8 PRIDE:Q489T8 GeneID:3520442
KEGG:cps:CPS_0418 PATRIC:21464197 OMA:TGIYEIE
BioCyc:CPSY167879:GI48-513-MONOMER Uniprot:Q489T8
Length = 150
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVL----NIEKF 81
+EVIL K+ KLG +G+ V V GY N+L+P+ AV N+E F
Sbjct: 1 MEVILLDKIAKLGGLGDKVSVKSGYARNYLLPQGKAVFASEANVEHF 47
>UNIPROTKB|Q9KUY9 [details] [associations]
symbol:rplI "50S ribosomal protein L9" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] HAMAP:MF_00503 InterPro:IPR000244
InterPro:IPR020594 Pfam:PF01281 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
eggNOG:COG0359 KO:K02939 Gene3D:3.10.430.100 Gene3D:3.40.5.10
InterPro:IPR009027 InterPro:IPR020069 InterPro:IPR020070
PANTHER:PTHR21368 Pfam:PF03948 SUPFAM:SSF55658 SUPFAM:SSF55653
TIGRFAMs:TIGR00158 PROSITE:PS00651 ProtClustDB:PRK00137 OMA:TGIYEIE
PIR:C82333 RefSeq:NP_230023.1 ProteinModelPortal:Q9KUY9 SMR:Q9KUY9
PRIDE:Q9KUY9 DNASU:2615048 GeneID:2615048 KEGG:vch:VC0369
PATRIC:20079809 Uniprot:Q9KUY9
Length = 149
Score = 84 (34.6 bits), Expect = 0.00097, P = 0.00097
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVL 76
++VIL K+ LG +G+TV V GY N L+P+ AV+
Sbjct: 1 MQVILLDKIGNLGSLGDTVNVKSGYARNFLIPQGKAVM 38
>TIGR_CMR|VC_0369 [details] [associations]
symbol:VC_0369 "ribosomal protein L9" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00503 InterPro:IPR000244 InterPro:IPR020594 Pfam:PF01281
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 eggNOG:COG0359 KO:K02939
Gene3D:3.10.430.100 Gene3D:3.40.5.10 InterPro:IPR009027
InterPro:IPR020069 InterPro:IPR020070 PANTHER:PTHR21368
Pfam:PF03948 SUPFAM:SSF55658 SUPFAM:SSF55653 TIGRFAMs:TIGR00158
PROSITE:PS00651 ProtClustDB:PRK00137 OMA:TGIYEIE PIR:C82333
RefSeq:NP_230023.1 ProteinModelPortal:Q9KUY9 SMR:Q9KUY9
PRIDE:Q9KUY9 DNASU:2615048 GeneID:2615048 KEGG:vch:VC0369
PATRIC:20079809 Uniprot:Q9KUY9
Length = 149
Score = 84 (34.6 bits), Expect = 0.00097, P = 0.00097
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVL 76
++VIL K+ LG +G+TV V GY N L+P+ AV+
Sbjct: 1 MQVILLDKIGNLGSLGDTVNVKSGYARNFLIPQGKAVM 38
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.139 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 90 90 0.00091 102 3 11 22 0.41 29
29 0.39 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 507 (54 KB)
Total size of DFA: 96 KB (2069 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.78u 0.17s 9.95t Elapsed: 00:00:01
Total cpu time: 9.78u 0.17s 9.95t Elapsed: 00:00:01
Start: Mon May 20 23:09:09 2013 End: Mon May 20 23:09:10 2013