BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043613
(90 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A1AM21|RL9_PELPD 50S ribosomal protein L9 OS=Pelobacter propionicus (strain DSM
2379) GN=rplI PE=3 SV=1
Length = 151
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQRR 90
++VIL +D LG +G+ VKVAPGY N+L+PK LAV EK A + +R
Sbjct: 1 MKVILKENIDTLGHIGDIVKVAPGYARNYLLPKGLAVEATEKNAKALEHVKR 52
>sp|B0JQ94|RL9_MICAN 50S ribosomal protein L9 OS=Microcystis aeruginosa (strain
NIES-843) GN=rplI PE=3 SV=1
Length = 152
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 32/40 (80%)
Query: 37 RRLEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVL 76
+R++VIL KV KLG+ G+ V+VAPGY N+L+P+ +AVL
Sbjct: 3 KRMQVILNQKVSKLGENGDVVEVAPGYARNYLIPQGVAVL 42
>sp|B1WTN1|RL9_CYAA5 50S ribosomal protein L9 OS=Cyanothece sp. (strain ATCC 51142)
GN=rplI PE=3 SV=1
Length = 152
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 37 RRLEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQRR 90
+R++V+L ++KLGK G+ V+VAPGY N+L+P+ LA L + EQRR
Sbjct: 3 KRVQVVLNESINKLGKDGDLVEVAPGYARNYLLPQKLATLATPGILKQV-EQRR 55
>sp|B5EHW6|RL9_GEOBB 50S ribosomal protein L9 OS=Geobacter bemidjiensis (strain Bem /
ATCC BAA-1014 / DSM 16622) GN=rplI PE=3 SV=1
Length = 147
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQRR 90
++VIL VD LG +G+ VKVAPGY N L+PK A+ EK A + +R
Sbjct: 1 MKVILKENVDNLGHIGDIVKVAPGYARNFLLPKGFAIEATEKNAKALEHAKR 52
>sp|B7KAD1|RL9_CYAP7 50S ribosomal protein L9 OS=Cyanothece sp. (strain PCC 7424)
GN=rplI PE=3 SV=1
Length = 152
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 37 RRLEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQRR 90
+R++V+LT V+KLGK G+ V+VAPGY N+L+P+ +A + + EQRR
Sbjct: 3 KRVQVVLTKNVNKLGKSGDLVEVAPGYARNYLLPQGIANIATPGILRQV-EQRR 55
>sp|B3E6H6|RL9_GEOLS 50S ribosomal protein L9 OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=rplI PE=3 SV=1
Length = 147
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQRR 90
+++IL ++ LG++G+ VKVAPGY N+L+PK LA+ EK A + +R
Sbjct: 1 MKLILKENIEHLGQIGDIVKVAPGYARNYLLPKGLAIEATEKNAKALEHAKR 52
>sp|C6E506|RL9_GEOSM 50S ribosomal protein L9 OS=Geobacter sp. (strain M21) GN=rplI
PE=3 SV=1
Length = 147
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQRR 90
+++IL VD LG +G+ VKVAPGY N L+PK A+ EK A + +R
Sbjct: 1 MKLILKENVDNLGHIGDIVKVAPGYARNFLLPKGFAIEATEKNAKALEHAKR 52
>sp|Q01QR6|RL9_SOLUE 50S ribosomal protein L9 OS=Solibacter usitatus (strain
Ellin6076) GN=rplI PE=3 SV=1
Length = 148
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQRR 90
+EVIL ++ LG G+ VKVAPGY N L+PK +AV E ++ ++R+
Sbjct: 1 MEVILREDIENLGTRGQLVKVAPGYARNFLLPKRMAVAATEANRKIVEQERQ 52
>sp|Q74FE1|RL9_GEOSL 50S ribosomal protein L9 OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=rplI PE=3 SV=1
Length = 148
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQRR 90
++VIL V+ LG +G+ VKVAPGY N+L+P+ A+ EK A + +R
Sbjct: 1 MKVILKENVENLGHIGDIVKVAPGYARNYLIPRNFAIEATEKNAKALEHAKR 52
>sp|Q8YZA0|RL9_NOSS1 50S ribosomal protein L9 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=rplI PE=3 SV=1
Length = 152
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 37 RRLEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLA 74
+R++++LT V KLG+ G+ V VAPGY N+L+P+ LA
Sbjct: 3 KRVQLVLTKDVSKLGRSGDLVDVAPGYARNYLIPQSLA 40
>sp|Q3MGD1|RL9_ANAVT 50S ribosomal protein L9 OS=Anabaena variabilis (strain ATCC
29413 / PCC 7937) GN=rplI PE=3 SV=1
Length = 152
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 37 RRLEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLA 74
+R++++LT V KLG+ G+ V VAPGY N+L+P+ LA
Sbjct: 3 KRVQLVLTKDVSKLGRSGDLVDVAPGYARNYLIPQSLA 40
>sp|B1XN09|RL9_SYNP2 50S ribosomal protein L9 OS=Synechococcus sp. (strain ATCC 27264
/ PCC 7002 / PR-6) GN=rplI PE=3 SV=1
Length = 152
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 37 RRLEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQRR 90
+RL+V+L V KLG G+ V+VAPGY N+L+P+ +A L + EQRR
Sbjct: 3 KRLQVVLNQDVRKLGNNGDLVEVAPGYARNYLLPQGIASLATPGILRQV-EQRR 55
>sp|P0A499|RL9_THEEB 50S ribosomal protein L9 OS=Thermosynechococcus elongatus (strain
BP-1) GN=rplI PE=3 SV=1
Length = 152
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 30/38 (78%)
Query: 37 RRLEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLA 74
+R++V+L V+KLG++G+ V+VAPGY N+L P+ +A
Sbjct: 3 KRVQVVLNETVNKLGRMGQVVEVAPGYARNYLFPRGIA 40
>sp|P0A4A0|RL9_SYNEL 50S ribosomal protein L9 OS=Synechococcus elongatus GN=rplI PE=3
SV=1
Length = 152
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 30/38 (78%)
Query: 37 RRLEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLA 74
+R++V+L V+KLG++G+ V+VAPGY N+L P+ +A
Sbjct: 3 KRVQVVLNETVNKLGRMGQVVEVAPGYARNYLFPRGIA 40
>sp|Q115S4|RL9_TRIEI 50S ribosomal protein L9 OS=Trichodesmium erythraeum (strain
IMS101) GN=rplI PE=3 SV=1
Length = 152
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 37 RRLEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLA 74
++L+V+L V+KLGK G+ V VAPGY N+L+P +A
Sbjct: 3 KKLQVVLNKDVNKLGKSGDVVDVAPGYARNYLIPNKIA 40
>sp|P42352|RL9_SYNY3 50S ribosomal protein L9 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=rplI PE=3 SV=2
Length = 152
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 37 RRLEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQRR 90
+R++V+L ++KLG G+ V+VAPGY N+L+PK L V+ + EQRR
Sbjct: 3 KRVKVVLNETINKLGFTGDLVEVAPGYARNYLIPKGLGVVATPGILRQV-EQRR 55
>sp|B7JUZ9|RL9_CYAP8 50S ribosomal protein L9 OS=Cyanothece sp. (strain PCC 8801)
GN=rplI PE=3 SV=1
Length = 152
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 31/40 (77%)
Query: 37 RRLEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVL 76
+R++++L ++KLG+ G+ V+VAPGY N+L+P+ + V+
Sbjct: 3 KRVQIVLNKTINKLGQTGDLVEVAPGYARNYLIPQGMGVI 42
>sp|B2IVH8|RL9_NOSP7 50S ribosomal protein L9 OS=Nostoc punctiforme (strain ATCC 29133
/ PCC 73102) GN=rplI PE=3 SV=1
Length = 152
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 37 RRLEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLA 74
+R++++L + KLGK G+ V+VAPGY N+L+P+ LA
Sbjct: 3 KRVQLVLNQDISKLGKSGDLVEVAPGYARNYLIPQKLA 40
>sp|B9M5V1|RL9_GEOSF 50S ribosomal protein L9 OS=Geobacter sp. (strain FRC-32) GN=rplI
PE=3 SV=1
Length = 147
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAV 75
++VIL +D LG +G+ VKVAPGY N+L+PK LA+
Sbjct: 1 MKVILKENLDNLGHIGDIVKVAPGYARNYLLPKGLAL 37
>sp|A8F0E7|RL9_RICM5 50S ribosomal protein L9 OS=Rickettsia massiliae (strain Mtu5)
GN=rplI PE=3 SV=1
Length = 171
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQR 89
+E+IL V KLGK+G+ +KVA G+ N+L+P+ LA+ E LI +Q+
Sbjct: 1 MEIILIKPVRKLGKIGDILKVADGFGRNYLLPQKLAIRATEPNKELIVKQK 51
>sp|C4K161|RL9_RICPU 50S ribosomal protein L9 OS=Rickettsia peacockii (strain Rustic)
GN=rplI PE=3 SV=1
Length = 171
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQR 89
+E+IL V KLGK+G+ +KVA G+ N+L+P+ LA+ E LI +Q+
Sbjct: 1 MEIILIKPVRKLGKIGDILKVADGFGRNYLLPQKLAIRATEPNKELIVKQK 51
>sp|C3PM74|RL9_RICAE 50S ribosomal protein L9 OS=Rickettsia africae (strain ESF-5)
GN=rplI PE=3 SV=1
Length = 171
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQR 89
+E+IL V KLGK+G+ +KVA G+ N+L+P+ LA+ E LI +Q+
Sbjct: 1 MEIILIKPVRKLGKIGDILKVADGFGRNYLLPQKLAIRATEPNKELIVKQK 51
>sp|A8GQJ6|RL9_RICRS 50S ribosomal protein L9 OS=Rickettsia rickettsii (strain Sheila
Smith) GN=rplI PE=3 SV=1
Length = 171
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQR 89
+E+IL V KLGK+G+ +KVA G+ N+L+P+ LA+ E LI +Q+
Sbjct: 1 MEIILIKPVRKLGKIGDILKVADGFGRNYLLPQKLAIRATEPNKELIVKQK 51
>sp|B0BVY2|RL9_RICRO 50S ribosomal protein L9 OS=Rickettsia rickettsii (strain Iowa)
GN=rplI PE=3 SV=1
Length = 171
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQR 89
+E+IL V KLGK+G+ +KVA G+ N+L+P+ LA+ E LI +Q+
Sbjct: 1 MEIILIKPVRKLGKIGDILKVADGFGRNYLLPQKLAIRATEPNKELIVKQK 51
>sp|A8GLX8|RL9_RICAH 50S ribosomal protein L9 OS=Rickettsia akari (strain Hartford)
GN=rplI PE=3 SV=1
Length = 171
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQR 89
+E+IL V KLGK+G+ +KVA G+ N+L+P+ LA+ E LI +Q+
Sbjct: 1 MEIILIKPVRKLGKIGDMLKVADGFGRNYLLPQKLAIRATEPNKELIVKQK 51
>sp|Q92JK1|RL9_RICCN 50S ribosomal protein L9 OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=rplI PE=3 SV=1
Length = 171
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQR 89
+E+IL V KLGK+G+ +KVA G+ N+L+P+ LA+ E LI +Q+
Sbjct: 1 MEIILIKPVRKLGKIGDILKVADGFGRNYLLPQKLAIRATEPNKELIVKQK 51
>sp|Q4UN66|RL9_RICFE 50S ribosomal protein L9 OS=Rickettsia felis (strain ATCC VR-1525
/ URRWXCal2) GN=rplI PE=3 SV=1
Length = 171
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQR 89
+E+IL V KLGK+G+ +KVA G+ N+L+P+ LA+ E LI +Q+
Sbjct: 1 MEIILIKPVRKLGKIGDMLKVADGFGRNYLLPQKLAIRATEPNKELIVKQK 51
>sp|A8EXA9|RL9_RICCK 50S ribosomal protein L9 OS=Rickettsia canadensis (strain McKiel)
GN=rplI PE=3 SV=1
Length = 171
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQR 89
+E+IL V KLGK+G+ +KVA G+ N+L+P+ LA+ E LI +Q+
Sbjct: 1 MEIILIKPVRKLGKIGDILKVADGFGRNYLLPQKLAIRATEPNKELIVKQK 51
>sp|Q1IHW5|RL9_KORVE 50S ribosomal protein L9 OS=Koribacter versatilis (strain
Ellin345) GN=rplI PE=3 SV=1
Length = 153
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAV 75
+EVIL V+KLG G+ VKVA GY N+L+PK LA+
Sbjct: 1 MEVILKQDVEKLGHQGDVVKVAEGYGRNYLLPKKLAI 37
>sp|Q9ZEA4|RL9_RICPR 50S ribosomal protein L9 OS=Rickettsia prowazekii (strain Madrid
E) GN=rplI PE=3 SV=1
Length = 171
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQR 89
+EVIL V KLGK+G+ +KVA G+ N+L+P+ LA+ + LI +Q+
Sbjct: 1 MEVILIKPVRKLGKIGDILKVADGFGRNYLLPQKLAIRATKSNKELIVKQK 51
>sp|Q39RR5|RL9_GEOMG 50S ribosomal protein L9 OS=Geobacter metallireducens (strain
GS-15 / ATCC 53774 / DSM 7210) GN=rplI PE=3 SV=1
Length = 148
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQRR 90
++VIL ++ LG +G+ VKVAPGY N+L+P+ A EK A + +R
Sbjct: 1 MKVILKENLENLGHIGDIVKVAPGYARNYLLPRGYATEATEKNAKALEHAKR 52
>sp|Q1RKB3|RL9_RICBR 50S ribosomal protein L9 OS=Rickettsia bellii (strain RML369-C)
GN=rplI PE=3 SV=1
Length = 173
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQR 89
+EVIL V KLGK+GE KVA G+ N+L+P+ LA+ E LI +Q+
Sbjct: 1 MEVILIKPVRKLGKIGEIHKVADGFGRNYLLPQKLAIRATELNKELIVKQK 51
>sp|A8GY14|RL9_RICB8 50S ribosomal protein L9 OS=Rickettsia bellii (strain OSU 85-389)
GN=rplI PE=3 SV=1
Length = 173
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQR 89
+EVIL V KLGK+GE KVA G+ N+L+P+ LA+ E LI +Q+
Sbjct: 1 MEVILIKPVRKLGKIGEIHKVADGFGRNYLLPQKLAIRATELNKELIVKQK 51
>sp|B8HS22|RL9_CYAP4 50S ribosomal protein L9 OS=Cyanothece sp. (strain PCC 7425 /
ATCC 29141) GN=rplI PE=3 SV=1
Length = 152
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 37 RRLEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLA 74
+R++++L V KLG+ G+ V+VAPGY N+L+PK +A
Sbjct: 3 KRIQLVLNQDVYKLGRNGDLVEVAPGYARNYLLPKAMA 40
>sp|A0LN56|RL9_SYNFM 50S ribosomal protein L9 OS=Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB) GN=rplI PE=3 SV=1
Length = 148
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAV 75
++VILT + LG++G+ V VAPGY N+L P+ LA+
Sbjct: 1 MKVILTENLSSLGQIGQVVNVAPGYARNYLFPQGLAL 37
>sp|B8FI54|RL9_DESAA 50S ribosomal protein L9 OS=Desulfatibacillum alkenivorans
(strain AK-01) GN=rplI PE=3 SV=1
Length = 148
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIE 79
++VILT +D LG +G V VA GY N+L+PK AVL E
Sbjct: 1 MKVILTENIDSLGLIGSEVAVADGYARNYLLPKKKAVLATE 41
>sp|Q3A320|RL9_PELCD 50S ribosomal protein L9 OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=rplI PE=3 SV=1
Length = 148
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVL----NIEKFAHLIRE 87
+++IL VD LG++G+ VKV PGY N L+P+ AV NI++ H R+
Sbjct: 1 MDIILMENVDGLGQIGDLVKVKPGYARNFLIPQKFAVEANTRNIKELEHQKRQ 53
>sp|Q68XR7|RL9_RICTY 50S ribosomal protein L9 OS=Rickettsia typhi (strain ATCC VR-144
/ Wilmington) GN=rplI PE=3 SV=1
Length = 171
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQR 89
+E+IL V KLGK+G+ +KVA G+ N+L+P+ LA+ + LI +Q+
Sbjct: 1 MEIILIKPVRKLGKIGDILKVANGFGRNYLLPQKLAIRATKSNKELIVKQK 51
>sp|A0PKH8|RL9_MYCUA 50S ribosomal protein L9 OS=Mycobacterium ulcerans (strain Agy99)
GN=rplI PE=3 SV=1
Length = 152
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVL---NIEKFAHLIREQR 89
+++ILT VD LG VG+TV+V GY N L+P+ +A++ +K A IR R
Sbjct: 1 MKLILTADVDHLGSVGDTVEVKDGYGRNFLLPRGMAIVASRGAQKQADEIRRSR 54
>sp|B0RZP8|RL9_FINM2 50S ribosomal protein L9 OS=Finegoldia magna (strain ATCC 29328)
GN=rplI PE=3 SV=1
Length = 148
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAV 75
++VILT+ VDKLGK GE V G+ N L+P LAV
Sbjct: 1 MKVILTSDVDKLGKAGEMVNAKTGFARNFLLPNKLAV 37
>sp|B0UL32|RL9_METS4 50S ribosomal protein L9 OS=Methylobacterium sp. (strain 4-46)
GN=rplI PE=3 SV=1
Length = 189
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQR 89
+EVIL +V KLG++GETVKV PG+ N+L+ + A+ E +QR
Sbjct: 1 MEVILLERVAKLGQMGETVKVRPGFARNYLLARGKALRATEANKKRFEDQR 51
>sp|B2HIC0|RL9_MYCMM 50S ribosomal protein L9 OS=Mycobacterium marinum (strain ATCC
BAA-535 / M) GN=rplI PE=3 SV=1
Length = 152
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVL---NIEKFAHLIREQR 89
+++ILT VD LG VG+TV+V GY N L+P+ +A++ +K A IR R
Sbjct: 1 MKLILTADVDHLGSVGDTVEVKDGYGRNFLLPRGMAIVASRGAQKQADEIRRSR 54
>sp|B8IEC9|RL9_METNO 50S ribosomal protein L9 OS=Methylobacterium nodulans (strain
ORS2060 / LMG 21967) GN=rplI PE=3 SV=1
Length = 189
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQR 89
+EVIL +V KLG++GETVKV PG+ N+L+ + A+ E +QR
Sbjct: 1 MEVILLERVAKLGQMGETVKVRPGFARNYLLARGKALRATEANKKRFEDQR 51
>sp|Q5N1S9|RL9_SYNP6 50S ribosomal protein L9 OS=Synechococcus sp. (strain ATCC 27144
/ PCC 6301 / SAUG 1402/1) GN=rplI PE=3 SV=1
Length = 152
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 37 RRLEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLA 74
+R++V+L+ V KLG+ G+ V+VAPGY N L+P+ LA
Sbjct: 3 KRVQVVLSQDVYKLGRDGDLVEVAPGYARNFLLPQGLA 40
>sp|Q31K30|RL9_SYNE7 50S ribosomal protein L9 OS=Synechococcus elongatus (strain PCC
7942) GN=rplI PE=3 SV=1
Length = 152
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 37 RRLEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLA 74
+R++V+L+ V KLG+ G+ V+VAPGY N L+P+ LA
Sbjct: 3 KRVQVVLSQDVYKLGRDGDLVEVAPGYARNFLLPQGLA 40
>sp|Q72GV5|RL9_THET2 50S ribosomal protein L9 OS=Thermus thermophilus (strain HB27 /
ATCC BAA-163 / DSM 7039) GN=rplI PE=1 SV=1
Length = 148
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIE 79
++VIL ++ LG VG+ V V PGY N+L+P+ LAVL E
Sbjct: 1 MKVILLEPLENLGDVGQVVDVKPGYARNYLLPRGLAVLATE 41
>sp|P27151|RL9_THETH 50S ribosomal protein L9 OS=Thermus thermophilus GN=rplI PE=1
SV=3
Length = 148
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIE 79
++VIL ++ LG VG+ V V PGY N+L+P+ LAVL E
Sbjct: 1 MKVILLEPLENLGDVGQVVDVKPGYARNYLLPRGLAVLATE 41
>sp|Q5SLQ1|RL9_THET8 50S ribosomal protein L9 OS=Thermus thermophilus (strain HB8 /
ATCC 27634 / DSM 579) GN=rplI PE=1 SV=1
Length = 148
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIE 79
++VIL ++ LG VG+ V V PGY N+L+P+ LAVL E
Sbjct: 1 MKVILLEPLENLGDVGQVVDVKPGYARNYLLPRGLAVLATE 41
>sp|Q7NHA5|RL9_GLOVI 50S ribosomal protein L9 OS=Gloeobacter violaceus (strain PCC
7421) GN=rplI PE=3 SV=1
Length = 153
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 41 VILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAV 75
++L VD LGK G V+VAPGY N+L+P+ LAV
Sbjct: 5 IVLKKDVDTLGKAGTLVEVAPGYARNYLIPQGLAV 39
>sp|Q8R6M7|RL9_THETN 50S ribosomal protein L9 OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=rplI PE=3 SV=1
Length = 147
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 39 LEVILTTKVDKLGKVGETVKVAPGYFHNHLMPKLLAVLNIEKFAHLIREQRR 90
++VIL V +GK GE V V+ GY N+L+PK LA+ E ++ E+++
Sbjct: 1 MKVILVKDVKNVGKAGEVVNVSDGYGRNYLIPKGLAIEATESNLKMLNEKKK 52
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.139 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,016,131
Number of Sequences: 539616
Number of extensions: 1064976
Number of successful extensions: 3746
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3058
Number of HSP's gapped (non-prelim): 689
length of query: 90
length of database: 191,569,459
effective HSP length: 60
effective length of query: 30
effective length of database: 159,192,499
effective search space: 4775774970
effective search space used: 4775774970
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)