Your job contains 1 sequence.
>043618
MALEAVVFQQDPFSYGFKDLGETSDPWSCGFGLEEGAAHSEILLQNGGLGLMTQKMAKTN
SSTCGGGGDGFFTGESRPLEPPLACHLRKRRRTRSVKNIEEVESQRMTHIFVERNRRKQM
KNYLSVLRSLMPPSYVQRGDQASIVGGAINYVKELEQLVQTLEVHKRIHILQQSDDHDHD
DAGFSTSIFSNFFSFPQYSDFRPNDSRESSSTAPKKPSGPVADIEVTMAESNANIKILST
RYPKQLFKMVTGFHSLGLHVLHLNVATFDNQVLYTFSVKVEEGCHLRSMNEVAAAVYDMM
GRVQGEAAFK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043618
(310 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2009537 - symbol:AT1G22490 "AT1G22490" species... 547 4.2e-57 2
TAIR|locus:2207061 - symbol:AT1G72210 "AT1G72210" species... 517 6.9e-55 2
UNIPROTKB|Q6YTU1 - symbol:P0419H09.4 "cDNA clone:002-131-... 508 1.4e-52 2
UNIPROTKB|Q8H7N8 - symbol:OJ1217B09.8 "BHLH transcription... 538 7.2e-52 1
UNIPROTKB|Q6K4B1 - symbol:OJ1595_D08.4 "Os09g0468700 prot... 511 5.2e-49 1
UNIPROTKB|Q6ZGS3 - symbol:OJ1148_D05.9 "Putative basic-he... 286 1.8e-48 2
UNIPROTKB|Q7XLY9 - symbol:OSJNBa0086O06.20 "OSJNBa0086O06... 302 2.6e-47 3
TAIR|locus:2168235 - symbol:AT5G65320 "AT5G65320" species... 440 1.7e-41 1
TAIR|locus:2178560 - symbol:bHLH071 "AT5G46690" species:3... 431 1.6e-40 1
TAIR|locus:2116977 - symbol:AT4G01460 "AT4G01460" species... 429 2.6e-40 1
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 301 4.6e-40 2
TAIR|locus:2079512 - symbol:AT3G61950 "AT3G61950" species... 292 5.7e-38 2
TAIR|locus:2093746 - symbol:FMA "AT3G24140" species:3702 ... 389 4.4e-36 1
UNIPROTKB|Q5KQG3 - symbol:OSJNBb0086G17.12 "Putative unch... 207 4.2e-30 2
TAIR|locus:2154197 - symbol:SPCH "AT5G53210" species:3702... 214 5.8e-28 2
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 307 2.2e-27 1
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 211 9.4e-27 2
UNIPROTKB|Q8H8H9 - symbol:OJ1126B12.2 "Helix-loop-helix D... 213 3.0e-24 2
UNIPROTKB|Q653A4 - symbol:OSJNBa0043B22.14 "Basic helix-l... 205 4.5e-23 2
UNIPROTKB|Q6Z7U5 - symbol:P0471A11.43 "Putative uncharact... 202 2.9e-16 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 148 1.2e-07 1
TAIR|locus:2012146 - symbol:RGE1 "AT1G49770" species:3702... 143 1.7e-07 1
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 127 1.5e-06 2
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 133 2.4e-06 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 136 3.2e-06 1
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 133 6.5e-06 1
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 132 9.7e-06 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 118 1.5e-05 2
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 106 3.2e-05 2
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 120 3.6e-05 2
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 120 4.2e-05 2
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 123 4.6e-05 1
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 105 8.8e-05 2
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 106 0.00015 2
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 105 0.00020 2
TAIR|locus:504956298 - symbol:AT1G62975 "AT1G62975" speci... 112 0.00044 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 114 0.00053 1
UNIPROTKB|Q6YYG9 - symbol:OSJNBa0051E21.18 "Putative unch... 113 0.00055 2
UNIPROTKB|Q7X8R0 - symbol:OSJNBa0083N12.3 "OSJNBa0083N12.... 115 0.00059 1
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 110 0.00076 1
>TAIR|locus:2009537 [details] [associations]
symbol:AT1G22490 "AT1G22490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006551
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AY088234 EMBL:AF488622 IPI:IPI00545534 PIR:B86358
RefSeq:NP_564171.1 UniGene:At.19247 ProteinModelPortal:Q9SK91
SMR:Q9SK91 EnsemblPlants:AT1G22490.1 GeneID:838855
KEGG:ath:AT1G22490 TAIR:At1g22490 eggNOG:NOG281753
InParanoid:Q8L9T3 OMA:ESHANIK PhylomeDB:Q9SK91
ProtClustDB:CLSN2679534 Genevestigator:Q9SK91 Uniprot:Q9SK91
Length = 304
Score = 547 (197.6 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 122/232 (52%), Positives = 154/232 (66%)
Query: 75 ESRPLEPPLACHLRKRRRTRSVKNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPS 134
ES P PP H RKRRRTR+ KN EE+E+QRMTHI VERNRRKQM YL+VLRSLMP S
Sbjct: 87 ESHP--PPQ--HRRKRRRTRNCKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSS 142
Query: 135 YVQRGDQASIVGGAINYVKELEQLVQTLEVHKRIHILQQSDDHDHDDAGXXXXXXXXXXX 194
Y QRGDQASIVGGAINYVKELE ++Q++E KR HD G
Sbjct: 143 YAQRGDQASIVGGAINYVKELEHILQSMEP-KRTRT--------HDPKGDKTSTSSLVGP 193
Query: 195 XPQYSDFRPNDSRESSSTAPKKPSGPVADIEVTMAESNANIKILSTRYPKQLFKMVTGFH 254
+ F P S +SSS P+ S P A+IEVT+AES+ANIKI++ + P+QL K++T
Sbjct: 194 FTDFFSF-PQYSTKSSSDVPESSSSP-AEIEVTVAESHANIKIMTKKKPRQLLKLITSLQ 251
Query: 255 SLGLHVLHLNVATFDNQVLYTFSVKVEEGCHLRSMNEVAAAVYDMMGRVQGE 306
SL L +LHLNV T N +LY+ SV+VEEG L +++++A A+ + R+Q E
Sbjct: 252 SLRLTLLHLNVTTLHNSILYSISVRVEEGSQLNTVDDIATALNQTIRRIQEE 303
Score = 58 (25.5 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 1 MALEAVVFQQDPFSY 15
M LEAVV+ QDPF Y
Sbjct: 1 MPLEAVVYPQDPFGY 15
>TAIR|locus:2207061 [details] [associations]
symbol:AT1G72210 "AT1G72210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC067754 HOGENOM:HOG000238962 eggNOG:NOG281753
ProtClustDB:CLSN2679534 EMBL:AJ459771 EMBL:BT003871 EMBL:BT006086
IPI:IPI00538709 PIR:F96745 RefSeq:NP_177366.1 UniGene:At.35130
ProteinModelPortal:Q9C7T4 SMR:Q9C7T4 EnsemblPlants:AT1G72210.1
GeneID:843553 KEGG:ath:AT1G72210 TAIR:At1g72210 InParanoid:Q9C7T4
OMA:PQDPFSY PhylomeDB:Q9C7T4 Genevestigator:Q9C7T4 Uniprot:Q9C7T4
Length = 320
Score = 517 (187.1 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 117/237 (49%), Positives = 155/237 (65%)
Query: 75 ESRPLEPPLACH--LRKRRRTRSVKNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMP 132
ES+P +A RKRRRTRS KN EE+E+QRMTHI VERNRRKQM YL+VLRSLMP
Sbjct: 91 ESQPPPSDVAAGGGRRKRRRTRSSKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMP 150
Query: 133 PSYVQRGDQASIVGGAINYVKELEQLVQTLEVHKRIHILQQSDDHDHDDAGXXXXXXXXX 192
P Y QRGDQASIVGGAINY+KELE +Q++E + ++D AG
Sbjct: 151 PYYAQRGDQASIVGGAINYLKELEHHLQSMEPP----VKTATED---TGAGHDQTKTTSA 203
Query: 193 XXXPQYSDFRPNDSRESSSTAPKKPSGPVADIEVTMAESNANIKILSTRYPKQLFKMVTG 252
+SDF + T+ G +A+IEVTM ES+A++KIL+ + P+QL K+V+
Sbjct: 204 SSSGPFSDFFAFPQYSNRPTSAAAAEG-MAEIEVTMVESHASLKILAKKRPRQLLKLVSS 262
Query: 253 FHSLGLHVLHLNVATFDNQVLYTFSVKVEEGCHLRSMNEVAAAVYDMMGRVQGEAAF 309
SL L +LHLNV T D+ VLY+ SVKVEEG L ++ ++AAAV ++ R++ E++F
Sbjct: 263 IQSLRLTLLHLNVTTRDDSVLYSISVKVEEGSQLNTVEDIAAAVNQILRRIEEESSF 319
Score = 67 (28.6 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 1 MALEAVVFQQDPFSY 15
MALEAVV+ QDPFSY
Sbjct: 1 MALEAVVYPQDPFSY 15
>UNIPROTKB|Q6YTU1 [details] [associations]
symbol:P0419H09.4 "cDNA clone:002-131-D10, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP004213
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:HQ858861 EMBL:AP005918 EMBL:AK107626
RefSeq:NP_001062077.1 UniGene:Os.55174
EnsemblPlants:LOC_Os08g37730.1 GeneID:4345867 KEGG:osa:4345867
eggNOG:NOG250596 ProtClustDB:CLSN2919896 Uniprot:Q6YTU1
Length = 363
Score = 508 (183.9 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 120/241 (49%), Positives = 150/241 (62%)
Query: 81 PPLACHLRKRRRTRSVKNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGD 140
P A RKRRR R+VKN EEVESQRMTHI VERNRRKQM YL+VLRSLMP SYVQRGD
Sbjct: 114 PAAAAGRRKRRRARTVKNREEVESQRMTHIAVERNRRKQMNEYLAVLRSLMPASYVQRGD 173
Query: 141 QASIVGGAINYVKELEQLVQTLEVHKRIHILQQSDDHDHDDAGXXXXXXXXXXXXPQYSD 200
QASI+GGAINYVKE+EQL+Q+LE H+ + AG P +
Sbjct: 174 QASIIGGAINYVKEMEQLLQSLEAHRHARRARTDAAAALPFAGFFTFPQYSMSAVPTTTT 233
Query: 201 FR------PNDSRESSSTAP---------KKPSGPVADIEVTMAESNANIKILSTRYPKQ 245
N + + + A KPS VADIEVTM ES+AN+K+LS R P+Q
Sbjct: 234 TTVAAAATENGNAVAGAGAGDDADADVSGSKPSS-VADIEVTMVESHANLKVLSRRRPRQ 292
Query: 246 LFKMVTGFHSLGLHVLHLNVATFDNQVLYTFSVKVEEGCHLRSMNEVAAAVYDMMGRVQG 305
L +MV G L VLHLNVA+ + LY+ S+KVEE C L S++++AAAV+ ++ ++
Sbjct: 293 LLRMVAGLQHHRLAVLHLNVASAGHMALYSLSLKVEEDCQLTSVDDIAAAVHGIVETIEQ 352
Query: 306 E 306
E
Sbjct: 353 E 353
Score = 54 (24.1 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 1 MALEAVVFQQDP-FSYGFKDLGETSD----PWSCGFG--LEEGAAHSEILLQNG 47
MALEAVVF + F G E + WS G+G +++G E+++ +G
Sbjct: 1 MALEAVVFSEGYYFGCGGAMAAEAAAGGAWSWSHGYGGGVDQGKGAMELVVDDG 54
>UNIPROTKB|Q8H7N8 [details] [associations]
symbol:OJ1217B09.8 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC121489
EMBL:HQ858866 EMBL:AK107555 RefSeq:NP_001049217.1 UniGene:Os.31303
STRING:Q8H7N8 EnsemblPlants:LOC_Os03g08930.1 GeneID:4331887
KEGG:dosa:Os10t0376900-01 KEGG:osa:4331887 OMA:RIPPLHL
ProtClustDB:CLSN2693619 Uniprot:Q8H7N8
Length = 329
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 143/331 (43%), Positives = 182/331 (54%)
Query: 1 MALEAVVFQQDPFSYGF-KDLGETSDPWSC----------GFGLEEGAAHSEILLQNGGL 49
MALEAVVF Q F YG +D PW C GFG G + LQ +
Sbjct: 1 MALEAVVFPQGHFGYGCGRDSPAYGMPW-CDVLAAAGGGGGFGEFYGVDEWDDQLQVASV 59
Query: 50 GLMTQKMAKTNSSTCXXXXXXXXXXESRPLEPPLACHLRKRRRTRSVKNIEEVESQRMTH 109
++A ++S + P+ A RKRRRT+ VKN EE+E QRMTH
Sbjct: 60 D--EWEVASKDNSDASTEGKAAAAERAEPV----AAGRRKRRRTKVVKNKEEIECQRMTH 113
Query: 110 IFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGAINYVKELEQLVQTLEVHKRIH 169
I VERNRR+QM YL+VLRSLMP SY QRGDQASIVGGAINYVKELEQL+Q+LEV K +
Sbjct: 114 IAVERNRRRQMNEYLAVLRSLMPASYSQRGDQASIVGGAINYVKELEQLLQSLEVQKSLK 173
Query: 170 ILQQSDDHDHDDAGXXXXXXXXXXXXPQY---SDFRPNDSRESSS-----TAPKKPSG-- 219
+ D D P+ + S +SS TA SG
Sbjct: 174 NRSGAMDAAGDSPFAGFFSFPQYSTSPRTGCSAAASAGSSGSASSVVMDDTAGSAESGRQ 233
Query: 220 --PVADIEVTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVATFDNQVLYTFS 277
+ADIEVTM E +A++K+L+ R PKQL K+V G L + LHLNV T D VLY+FS
Sbjct: 234 SAAIADIEVTMVEGHASLKVLARRRPKQLLKLVVGLQQLRIPPLHLNVTTVDAMVLYSFS 293
Query: 278 VKVEEGCHLRSMNEVAAAVYDMMGRVQGEAA 308
+KVE+ L S+ ++A AV+ ++G +Q + A
Sbjct: 294 LKVEDDSKLGSVEDIATAVHQILGSIQQQEA 324
>UNIPROTKB|Q6K4B1 [details] [associations]
symbol:OJ1595_D08.4 "Os09g0468700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008215 EMBL:CM000146 eggNOG:NOG281753 EMBL:AP005399
EMBL:AP005574 RefSeq:NP_001175879.1 UniGene:Os.98668
EnsemblPlants:LOC_Os09g29360.1 GeneID:9267272 KEGG:osa:9267272
Uniprot:Q6K4B1
Length = 351
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 121/237 (51%), Positives = 153/237 (64%)
Query: 88 RKRRRTRSVKNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGG 147
RKRRR R+ KN EEVESQRMTHI VERNRRKQM YL+VLRSLMPPSY QRGDQASIVGG
Sbjct: 115 RKRRRARAAKNKEEVESQRMTHIAVERNRRKQMNEYLAVLRSLMPPSYAQRGDQASIVGG 174
Query: 148 AINYVKELEQLVQTLEVHKRIHILQQSDDHDHDDAGXXXXXXXXXXXXPQYS-------- 199
AIN+VKELEQL+Q+LE K +Q HD A PQYS
Sbjct: 175 AINFVKELEQLLQSLEARKSS---RQCAAHD---AAAAAAPFASFFTFPQYSMSAAAAAA 228
Query: 200 DFRP--ND--SRES--SSTAPKKPSG--P--VADIEVTMAESNANIKILSTRYPKQLFKM 249
P N+ R+ + TA + SG P VAD+EVTM ES+AN+++LS R P+QL ++
Sbjct: 229 PVAPVVNELHGRDDGGAGTAEAEASGSKPSAVADVEVTMVESHANLRVLSRRRPRQLLRL 288
Query: 250 VTGFHSLGLHVLHLNVATFDNQVLYTFSVKVEEGCHLRSMNEVAAAVYDMMGRVQGE 306
V L VLHLN+ + + VLY+FS+KVE+ C L S++E+A A + ++ ++Q E
Sbjct: 289 VVALQGHRLTVLHLNMTSAGHMVLYSFSLKVEDDCQLTSVDEIATAAHQIIEKIQEE 345
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 286 (105.7 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 56/80 (70%), Positives = 67/80 (83%)
Query: 88 RKRRRTRSVKNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGG 147
++RRR +S K+ EE E+QRMTHI VERNRR+QM YL++LRSLMP YVQRGDQASIVGG
Sbjct: 71 KRRRRAKSCKSREETETQRMTHIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQASIVGG 130
Query: 148 AINYVKELEQLVQTLEVHKR 167
AI +VKELEQ +Q+LE KR
Sbjct: 131 AIEFVKELEQQLQSLEAQKR 150
Score = 237 (88.5 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 48/91 (52%), Positives = 69/91 (75%)
Query: 218 SGPVADIEVTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVATFDNQVLYTFS 277
SG +ADIEV++ E++A+++++S R P QL KM+ G +L L VLHLNV T D+ VLYT S
Sbjct: 256 SG-LADIEVSLVETHASVRVMSPRRPGQLLKMIAGLQALRLTVLHLNVTTLDSLVLYTLS 314
Query: 278 VKVEEGCHLRSMNEVAAAVYDMMGRVQGEAA 308
VKVEEGC L +++++AAAV+ ++ V EAA
Sbjct: 315 VKVEEGCSLTTVDDIAAAVHHVLCIVDAEAA 345
>UNIPROTKB|Q7XLY9 [details] [associations]
symbol:OSJNBa0086O06.20 "OSJNBa0086O06.20 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL662981 UniGene:Os.52382 HOGENOM:HOG000238962
ProteinModelPortal:Q7XLY9 EnsemblPlants:LOC_Os04g50090.1
Gramene:Q7XLY9 OMA:RFFTYPQ Uniprot:Q7XLY9
Length = 362
Score = 302 (111.4 bits), Expect = 2.6e-47, Sum P(3) = 2.6e-47
Identities = 60/85 (70%), Positives = 72/85 (84%)
Query: 88 RKRRRTRSVKNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGG 147
++RRR RS K+ E+ ESQRMTHI VERNRR+QM YL+VLRSLMP SYV RGDQASIVGG
Sbjct: 76 KRRRRARSCKSREDAESQRMTHIAVERNRRRQMNEYLAVLRSLMPESYVHRGDQASIVGG 135
Query: 148 AINYVKELEQLVQTLEVHKRIHILQ 172
AI++VKELEQL+Q+LE KR ++Q
Sbjct: 136 AIDFVKELEQLLQSLEAQKRTLLMQ 160
Score = 153 (58.9 bits), Expect = 2.6e-47, Sum P(3) = 2.6e-47
Identities = 37/86 (43%), Positives = 51/86 (59%)
Query: 196 PQYS-DFRP-NDSRESSSTAPKKPSGPVADIEVTMAESNANIKILSTRYPKQLFKMVTGF 253
PQY P D A + +G VADIEV++ E++A+I++++ R P QL KMV G
Sbjct: 208 PQYVWCHNPAQDGGGGGGAAAENRAG-VADIEVSLVETHASIRVMAARRPGQLLKMVAGL 266
Query: 254 HSLGLHVLHLNVATFDNQVLYTFSVK 279
+L L VLHLNV + LY+ SVK
Sbjct: 267 QALRLTVLHLNVTALGSLALYSISVK 292
Score = 68 (29.0 bits), Expect = 2.6e-47, Sum P(3) = 2.6e-47
Identities = 14/35 (40%), Positives = 26/35 (74%)
Query: 274 YTFSVKVEEGCHLRSMNEVAAAVYDMMGRVQGEAA 308
Y+ +V VEEGC + +++++AAAV+ ++ + EAA
Sbjct: 318 YSTTV-VEEGCGMATVDDIAAAVHHVLCIIDAEAA 351
>TAIR|locus:2168235 [details] [associations]
symbol:AT5G65320 "AT5G65320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB011479 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 EMBL:AY070095 EMBL:AY096704
EMBL:AF488625 IPI:IPI00548412 RefSeq:NP_201335.1 UniGene:At.28395
ProteinModelPortal:Q9FKQ6 SMR:Q9FKQ6 EnsemblPlants:AT5G65320.1
GeneID:836657 KEGG:ath:AT5G65320 TAIR:At5g65320 eggNOG:NOG237691
InParanoid:Q9FKQ6 OMA:PNDQASI PhylomeDB:Q9FKQ6
ProtClustDB:CLSN2916276 Genevestigator:Q9FKQ6 Uniprot:Q9FKQ6
Length = 296
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 122/311 (39%), Positives = 171/311 (54%)
Query: 6 VVFQQDPFSYGFKDLGETSDPWSC-GFGLEEGAAHSE-ILLQNGGLGLMTQKMAKTNSST 63
++FQQD + +GF L ETS + + ++SE + Q + + A + +
Sbjct: 1 MMFQQD-YPHGFS-LVETSLSYEMLDYFQNIVVSNSEDVASQQNSISSSSYSSA---TLS 55
Query: 64 CXXXXXXXXXXES-RPLEPPLAC--HLRKRRRTRSVKNIEEVESQRMTHIFVERNRRKQM 120
C E PL C L ++RR RS K I + E+QRM HI VERNRRKQM
Sbjct: 56 CSITEQKSHLTEKLSPLRERYGCGDFLSRKRRRRSEKTIVDKENQRMNHIAVERNRRKQM 115
Query: 121 KNYLSVLRSLMPPSYVQRGDQASIVGGAINYVKELEQLVQTLEVHKRIHILQQSDDHDHD 180
++LS+L+S+MP SY Q DQASI+ G I+Y+K+LEQ +Q+LE + L QS + D
Sbjct: 116 NHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKLEQRLQSLEAQLKATKLNQSPNIFSD 175
Query: 181 DAGXXXXXXXXXXXXPQYSDFRPNDSRESSSTAPK----KPSGPVADIEVTMAESNANIK 236
PQYS + +SS++ K VAD+EVTM E +ANIK
Sbjct: 176 -----------FFMFPQYSTATATATATASSSSSSHHHHKRLEVVADVEVTMVERHANIK 224
Query: 237 ILSTRYPKQLFKMVTGFHSLGLHVLHLNVATFDNQVLYTFSVKVEEGCHLR-SMNEVAAA 295
+L+ P+ LFK++ F+SLGL LHLN+ T + L+TFSVKVE C L S NEVA
Sbjct: 225 VLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLFTFSVKVEADCQLTPSGNEVANT 284
Query: 296 VYDMMGRVQGE 306
V++++ RV E
Sbjct: 285 VHEVVRRVHKE 295
>TAIR|locus:2178560 [details] [associations]
symbol:bHLH071 "AT5G46690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AK221613 EMBL:BT025663 EMBL:AY087479 EMBL:AF488603
IPI:IPI00543871 RefSeq:NP_568666.1 UniGene:At.29935
ProteinModelPortal:Q56XR0 SMR:Q56XR0 IntAct:Q56XR0
EnsemblPlants:AT5G46690.1 GeneID:834712 KEGG:ath:AT5G46690
TAIR:At5g46690 eggNOG:NOG262411 InParanoid:Q56XR0 OMA:THANIRI
PhylomeDB:Q56XR0 ProtClustDB:CLSN2917741 Genevestigator:Q56XR0
Uniprot:Q56XR0
Length = 327
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 102/236 (43%), Positives = 139/236 (58%)
Query: 88 RKRRRTRSVKNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGG 147
R+RR+ R KN EE E+QRMTHI VERNRR+QM +LSVLRSLMP + +GDQASIVGG
Sbjct: 69 RRRRKPRVCKNEEEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGG 128
Query: 148 AINYVKELEQLVQTLEVHKRIHI-LQQS--DDHDHDDAGXXXXXXX-XXXXXPQY--SDF 201
AI+++KELE + +LE K + L QS D G Q+ +
Sbjct: 129 AIDFIKELEHKLLSLEAQKHHNAKLNQSVTSSTSQDSNGEQENPHQPSSLSLSQFFLHSY 188
Query: 202 RPNDSRESSSTAPKKPSGPVADIEVTMAESNANIKILSTRY-----------PKQLFKMV 250
P+ + ST+ K P+ D+EVT+ E++ANI+ILS R P QL K+V
Sbjct: 189 DPSQENRNGSTSSVKT--PMEDLEVTLIETHANIRILSRRRGFRWSTLATTKPPQLSKLV 246
Query: 251 TGFHSLGLHVLHLNVATFDNQVLYTFSVKVEEGCHLRSMNEVAAAVYDMMGRVQGE 306
SL L +LHL+V T DN +Y+ S KVEE C L S++++A AV+ M+ ++ E
Sbjct: 247 ASLQSLSLSILHLSVTTLDNYAIYSISAKVEESCQLSSVDDIAGAVHHMLSIIEEE 302
>TAIR|locus:2116977 [details] [associations]
symbol:AT4G01460 "AT4G01460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488590 EMBL:AF096370 EMBL:AL161492 EMBL:AY099780
EMBL:AY128881 IPI:IPI00528581 PIR:A85019 PIR:T01948
RefSeq:NP_192055.1 UniGene:At.34425 ProteinModelPortal:Q9M128
SMR:Q9M128 EnsemblPlants:AT4G01460.1 GeneID:828089
KEGG:ath:AT4G01460 TAIR:At4g01460 eggNOG:NOG293017
HOGENOM:HOG000238962 InParanoid:Q9M128 OMA:QINGEVM PhylomeDB:Q9M128
ProtClustDB:CLSN2685500 Genevestigator:Q9M128 Uniprot:Q9M128
Length = 315
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 91/219 (41%), Positives = 139/219 (63%)
Query: 88 RKRRRTRSVKNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGG 147
RKR+RTR+ KN +EVE+QRMTHI VERNRR+QM +L+ LRSLMPPS++QRGDQASIVGG
Sbjct: 96 RKRKRTRAPKNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGG 155
Query: 148 AINYVKELEQLVQTLEVHKRIHILQQSDDHDHDDAGXXXXXXXXXXXXPQYSDFRPNDSR 207
AI+++KELEQL+Q+LE KR D D + S + +
Sbjct: 156 AIDFIKELEQLLQSLEAEKR------KDGTD-ETPKTASCSSSSSLACTNSSISSVSTTS 208
Query: 208 ESSSTAPKKPSGPVADIEVTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVAT 267
E+ TA + G ++E T+ +++ ++K+ R +Q+ K + L L +LHL +++
Sbjct: 209 ENGFTA-RFGGGDTTEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISS 267
Query: 268 FDNQVLYTFSVKVEEGCHLRSMNEVAAAVYDMMGRVQGE 306
+ V+Y+F++K+E+GC L S +E+A AV+ + ++ GE
Sbjct: 268 SFDFVIYSFNLKMEDGCKLGSADEIATAVHQIFEQINGE 306
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 301 (111.0 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 62/90 (68%), Positives = 75/90 (83%)
Query: 88 RKRRRTRSVKNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGG 147
RKRRRT+ KNIEE+ESQRMTHI VERNRR+QM +L+ LRS++P SY+QRGDQASIVGG
Sbjct: 174 RKRRRTKPTKNIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGG 233
Query: 148 AINYVKELEQLVQTLEVHKRIHILQQSDDH 177
AI++VK LEQ +Q+LE KR QQSDD+
Sbjct: 234 AIDFVKILEQQLQSLEAQKRS---QQSDDN 260
Score = 142 (55.0 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 35/102 (34%), Positives = 55/102 (53%)
Query: 196 PQYSDFRPNDSRESSSTAPKKPSGPVADIEVTMAESNANIKILSTRYPKQLFKMVTGFHS 255
P+ + R N S + K+ IE T+ ES+ N+KI TR QL + +
Sbjct: 265 PEDNSLR-NISSNKLRASNKEEQSSKLKIEATVIESHVNLKIQCTRKQGQLLRSIILLEK 323
Query: 256 LGLHVLHLNVATFDN-QVLYTFSVKVEEGCHLRSMNEVAAAV 296
L VLHLN+ + N V Y+F++K+E+ C+L S +E+ AA+
Sbjct: 324 LRFTVLHLNITSPTNTSVSYSFNLKMEDECNLGSADEITAAI 365
>TAIR|locus:2079512 [details] [associations]
symbol:AT3G61950 "AT3G61950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL138642 HOGENOM:HOG000238962 EMBL:AF488600 EMBL:AK118527
EMBL:BT005298 EMBL:AJ630481 EMBL:AY568653 EMBL:AY088741
IPI:IPI00525313 IPI:IPI00529988 PIR:T47987 RefSeq:NP_567121.1
RefSeq:NP_850735.1 UniGene:At.22308 ProteinModelPortal:Q700E4
SMR:Q700E4 IntAct:Q700E4 EnsemblPlants:AT3G61950.1 GeneID:825368
KEGG:ath:AT3G61950 TAIR:At3g61950 eggNOG:NOG324736
InParanoid:Q700E4 OMA:RINHIAV PhylomeDB:Q700E4
ProtClustDB:CLSN2683564 Genevestigator:Q700E4 Uniprot:Q700E4
Length = 358
Score = 292 (107.8 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 58/95 (61%), Positives = 76/95 (80%)
Query: 88 RKRRRTRSVKNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGG 147
RKRR+T+ KN EE+E+QR+ HI VERNRR+QM +++ LR+L+PPSY+QRGDQASIVGG
Sbjct: 159 RKRRKTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGG 218
Query: 148 AINYVKELEQLVQTLEVHKRIHILQQSDDHDHDDA 182
AINYVK LEQ++Q+LE KR QQS+ ++A
Sbjct: 219 AINYVKVLEQIIQSLESQKRTQ--QQSNSEVVENA 251
Score = 131 (51.2 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 221 VADIEVTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVATFDNQ-VLYTFSVK 279
+ IE T+ +++ ++K+ + QL K + L L VLHLN+ T + V Y+F++K
Sbjct: 273 IPKIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLK 332
Query: 280 VEEGCHLRSMNEVAAAVY 297
+E+ C L S +E+ AAV+
Sbjct: 333 MEDECDLESADEITAAVH 350
Score = 43 (20.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 82 PLACHLRKRRRTRSVKNIEEVESQRMTHIFVERNRRKQMKN 122
PL+ H R++R+ I + Q MT +R + K KN
Sbjct: 135 PLSAHSRRKRK------INHLLPQEMTREKRKRRKTKPSKN 169
>TAIR|locus:2093746 [details] [associations]
symbol:FMA "AT3G24140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010052
"guard cell differentiation" evidence=IMP] [GO:0045597 "positive
regulation of cell differentiation" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0051782 "negative regulation of cell
division" evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0003677 GO:GO:0045597 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
GO:GO:0051782 EMBL:AB028621 GO:GO:0010052 EMBL:AK221324
EMBL:BT028961 EMBL:AF488624 IPI:IPI00523995 RefSeq:NP_189056.2
UniGene:At.37586 ProteinModelPortal:Q56YJ8 SMR:Q56YJ8 IntAct:Q56YJ8
STRING:Q56YJ8 PRIDE:Q56YJ8 EnsemblPlants:AT3G24140.1 GeneID:822000
KEGG:ath:AT3G24140 TAIR:At3g24140 eggNOG:NOG326823
InParanoid:Q56YJ8 OMA:KRRRLYG PhylomeDB:Q56YJ8
ProtClustDB:CLSN2680105 Genevestigator:Q56YJ8 Uniprot:Q56YJ8
Length = 414
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 94/214 (43%), Positives = 122/214 (57%)
Query: 89 KRRRTRSVKNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGA 148
KR+R R+ K EEVESQRMTHI VERNRRKQM +L VLRSLMP SYVQRGDQASI+GGA
Sbjct: 179 KRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGA 238
Query: 149 INYVKELEQLVQTLEVHKRIHILQQS--DDHDHDDAGXXXXXXXXXXXXPQYSDFRPNDS 206
I +V+ELEQL+Q LE KR IL ++ D + P +
Sbjct: 239 IEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTEL 298
Query: 207 RESSS----TAPKKPSGPVADIEVTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLH 262
TA K +AD+EV + +A IKILS R P QL K + L L +LH
Sbjct: 299 EGGGGLREETAENKSC--LADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILH 356
Query: 263 LNVATFDNQVLYTFSVKVEEGCHLRSMNEVAAAV 296
N+ T + VLY+F+VK+ + ++A+++
Sbjct: 357 TNITTMEQTVLYSFNVKITSETRFTA-EDIASSI 389
>UNIPROTKB|Q5KQG3 [details] [associations]
symbol:OSJNBb0086G17.12 "Putative uncharacterized protein
OSJNBb0086G17.12" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 OMA:SHIAVER EMBL:AC144455
ProteinModelPortal:Q5KQG3 EnsemblPlants:LOC_Os05g51820.1
Gramene:Q5KQG3 Uniprot:Q5KQG3
Length = 227
Score = 207 (77.9 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 41/71 (57%), Positives = 55/71 (77%)
Query: 107 MTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGAINYVKELEQLVQTLEVHK 166
M+HI VERNRR+QM ++L VLRSL P Y++RGDQASI+GGAI+++KEL+ L+Q+LE K
Sbjct: 1 MSHIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQTLLQSLEAQK 60
Query: 167 RIHILQQSDDH 177
+ QQ H
Sbjct: 61 KRR--QQPQAH 69
Score = 141 (54.7 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 30/80 (37%), Positives = 51/80 (63%)
Query: 218 SGPVADIEVTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVATFDNQVLYTFS 277
+ P+AD+E ++ +N ++ LS R P +++ SL L VLHLN+ T D+ VLY+F
Sbjct: 134 NSPMADVEARISGANVLLRTLSRRAPP--VRIIALLESLHLEVLHLNITTMDDTVLYSFV 191
Query: 278 VKVEEGCHLRSMNEVAAAVY 297
+K+ CHL S++++A V+
Sbjct: 192 LKIGLDCHL-SVDDLAMEVH 210
>TAIR|locus:2154197 [details] [associations]
symbol:SPCH "AT5G53210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB013388 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 GO:GO:0010374 EMBL:DQ868373
EMBL:AJ630498 EMBL:AY568670 IPI:IPI00520239 RefSeq:NP_200133.2
UniGene:At.50528 ProteinModelPortal:Q700C7 SMR:Q700C7 STRING:Q700C7
EnsemblPlants:AT5G53210.1 GeneID:835402 KEGG:ath:AT5G53210
TAIR:At5g53210 eggNOG:NOG325833 InParanoid:Q700C7 OMA:NHESSVI
PhylomeDB:Q700C7 ProtClustDB:CLSN2719098 Genevestigator:Q700C7
Uniprot:Q700C7
Length = 364
Score = 214 (80.4 bits), Expect = 5.8e-28, Sum P(2) = 5.8e-28
Identities = 39/63 (61%), Positives = 53/63 (84%)
Query: 105 QRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGAINYVKELEQLVQTLEV 164
Q+M+H+ VERNRRKQM +L+VLRSLMP YV+RGDQASI+GG + Y+ EL+Q++Q+LE
Sbjct: 100 QKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEA 159
Query: 165 HKR 167
K+
Sbjct: 160 KKQ 162
Score = 120 (47.3 bits), Expect = 5.8e-28, Sum P(2) = 5.8e-28
Identities = 24/76 (31%), Positives = 44/76 (57%)
Query: 221 VADIEVTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVATFDNQVLYTFSVKV 280
+AD+EV + +N +K +S + P Q+ K++ L L +L +N+ T D +L +F++K+
Sbjct: 285 LADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINTVDETMLNSFTIKI 344
Query: 281 EEGCHLRSMNEVAAAV 296
C L S E+A +
Sbjct: 345 GIECQL-SAEELAQQI 359
Score = 39 (18.8 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 83 LACHLRKRRRTRSV-KNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPS 134
+ C KR S+ + E S+ + + +KQ K Y VL + PS
Sbjct: 126 MPCFYVKRGDQASIIGGVVEYISE-LQQVLQSLEAKKQRKTYAEVLSPRVVPS 177
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 73/191 (38%), Positives = 106/191 (55%)
Query: 107 MTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGAINYVKELEQLVQTLEVHK 166
M+HI VERNRR+QM +L LRSL P Y++RGDQASI+GG I ++KEL+QLVQ LE K
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60
Query: 167 RIHILQQ-SDDHDHDDAGXXXXXXXXXXXXPQYSDFRPNDSRESSSTAPKKPSGPVADIE 225
R L + S +DH P +S + + + P A++E
Sbjct: 61 RRKTLNRPSFPYDHQTI-EPSSLGAATTRVP-FSRIENVMTTSTFKEVGACCNSPHANVE 118
Query: 226 VTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVATFDNQVLYTFSVKVEEGCH 285
++ SN ++++S R QL K+++ L VLHLN+++ + VLY F VK+ CH
Sbjct: 119 AKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKIGLECH 178
Query: 286 LRSMNEVAAAV 296
L S+ E+ V
Sbjct: 179 L-SLEELTLEV 188
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 211 (79.3 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 39/61 (63%), Positives = 53/61 (86%)
Query: 106 RMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGAINYVKELEQLVQTLEVH 165
+M+HI VERNRRKQM +L+VLRSLMP YV+RGDQASI+GG ++Y+KEL+Q++++LE
Sbjct: 131 KMSHITVERNRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSLEAK 190
Query: 166 K 166
K
Sbjct: 191 K 191
Score = 116 (45.9 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 221 VADIEVTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVATFDNQVLYTFSVKV 280
V D+ V A N +K +S R P Q K++ SL L +LH+++ T D+ + +F++K+
Sbjct: 336 VPDVRVEFAGPNLVLKTVSHRAPGQALKIIAALESLSLEILHVSICTVDDATVLSFTIKI 395
Query: 281 EEGCHLRSMNEVAAAV 296
C L S E+ +
Sbjct: 396 GIECEL-SAEELVQEI 410
>UNIPROTKB|Q8H8H9 [details] [associations]
symbol:OJ1126B12.2 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC098695
EnsemblPlants:LOC_Os03g03000.1 KEGG:dosa:Os03t0122100-00
OMA:GAIDYVK Uniprot:Q8H8H9
Length = 291
Score = 213 (80.0 bits), Expect = 3.0e-24, Sum P(2) = 3.0e-24
Identities = 41/67 (61%), Positives = 55/67 (82%)
Query: 97 KNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGAINYVKELE 156
K EE E+QRMTHI VERNRR+ M ++L+ LRSL+P +Y+ RGDQA++VGGAI+YVK+LE
Sbjct: 107 KKPEEAENQRMTHIAVERNRRRLMNDHLASLRSLIPSNYIPRGDQATVVGGAIDYVKQLE 166
Query: 157 QLVQTLE 163
Q + L+
Sbjct: 167 QQLVALQ 173
Score = 79 (32.9 bits), Expect = 3.0e-24, Sum P(2) = 3.0e-24
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 219 GPVADIEVTMAES-NANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVATFDNQ-VLYTF 276
G D+E T A + +++ R+ +L + V L L VLHL V + + V+Y F
Sbjct: 211 GSGVDVEATAAVGGHVRVRVAGRRWTGRLVRAVAAMEDLRLTVLHLAVTSVGHDAVVYCF 270
Query: 277 SVKVE 281
++KV+
Sbjct: 271 NLKVK 275
>UNIPROTKB|Q653A4 [details] [associations]
symbol:OSJNBa0043B22.14 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP005470 RefSeq:NP_001174827.1
UniGene:Os.73031 EnsemblPlants:LOC_Os06g33450.2 GeneID:9268477
KEGG:osa:9268477 OMA:YASPAMT Uniprot:Q653A4
Length = 396
Score = 205 (77.2 bits), Expect = 4.5e-23, Sum P(2) = 4.5e-23
Identities = 42/84 (50%), Positives = 59/84 (70%)
Query: 88 RKRRRT----RSVKNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQAS 143
+KRR+ S ++ + + HI VERNRRKQM L+VLRSLMP YV+RGDQAS
Sbjct: 114 QKRRKCCSPESSTTDVAAATTPKTAHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQAS 173
Query: 144 IVGGAINYVKELEQLVQTLEVHKR 167
I+GG ++Y+KEL+Q++ +LE K+
Sbjct: 174 IIGGVVDYIKELQQVLHSLEAKKQ 197
Score = 105 (42.0 bits), Expect = 4.5e-23, Sum P(2) = 4.5e-23
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 223 DIEVTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVATFDNQVLYTFSVKVEE 282
D++V A +N +K +S R P Q K++ L +LH ++T D+ + +F+VK+
Sbjct: 319 DVKVEFAGANLVLKTVSQRSPGQAVKIIAALEGRSLEILHAKISTVDDTAVNSFTVKIGI 378
Query: 283 GCHLRSMNEVAAAV 296
C L S E+ +
Sbjct: 379 ECEL-SAEELVQVI 391
>UNIPROTKB|Q6Z7U5 [details] [associations]
symbol:P0471A11.43 "Putative uncharacterized protein
P0471A11.43" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] GO:GO:0005634 EMBL:AP004814
Gramene:Q6Z7U5 Uniprot:Q6Z7U5
Length = 83
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 40/80 (50%), Positives = 58/80 (72%)
Query: 228 MAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVATF-DNQVLYTFSVKVEEGCHL 286
MAES+AN+++L+ R P+QL +MV LGL VLHLNV T D+ LY+FS+K+E+ C L
Sbjct: 1 MAESHANVRVLAPRRPRQLLRMVVALQCLGLTVLHLNVTTTADHLALYSFSLKMEDECRL 60
Query: 287 RSMNEVAAAVYDMMGRVQGE 306
S++E+A AV M+ ++ GE
Sbjct: 61 SSVDEIAGAVNQMVTKIAGE 80
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 54/195 (27%), Positives = 88/195 (45%)
Query: 109 HIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGAINYVKELEQLVQTLEVHKRI 168
++ ER RRK++ + L +LRS++P + + D+ASI+G AI+Y+KEL Q + L H +
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDL--HNEL 363
Query: 169 HILQQSDDHDHDDAGXXXXXXXXXXXXPQYSDFRPNDSRESSSTAPKKPSGPVADIEVTM 228
+ PQ R + SS P P G A +EV +
Sbjct: 364 ------ESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSL-PS-PKGQQARVEVRL 415
Query: 229 AESNA-NIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVATFDNQVLYTFSVK-VEEGCHL 286
E A NI + R P L + +LGL V ++ F+ L F + +EG +
Sbjct: 416 REGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEI 475
Query: 287 RSMNEVAAAVYDMMG 301
+++ A ++D G
Sbjct: 476 LP-DQIKAVLFDTAG 489
>TAIR|locus:2012146 [details] [associations]
symbol:RGE1 "AT1G49770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009790 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011807 EMBL:AF488623 IPI:IPI00539453 PIR:D96534
RefSeq:NP_175399.2 UniGene:At.38170 ProteinModelPortal:Q9FXA3
SMR:Q9FXA3 EnsemblPlants:AT1G49770.1 GeneID:841400
KEGG:ath:AT1G49770 TAIR:At1g49770 eggNOG:NOG272533
HOGENOM:HOG000272699 InParanoid:Q9FXA3 OMA:DHEIHIW PhylomeDB:Q9FXA3
ProtClustDB:CLSN2918353 Genevestigator:Q9FXA3 Uniprot:Q9FXA3
Length = 308
Score = 143 (55.4 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 34/86 (39%), Positives = 52/86 (60%)
Query: 89 KRRRTRSVKNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGA 148
K+R R+ KN EE HI+ ER RRK+M++ S L +L+P + D+++IV A
Sbjct: 54 KKRTKRNDKNHEEESPDHEIHIWTERERRKKMRDMFSKLHALLP-QLPPKADKSTIVDEA 112
Query: 149 INYVKELEQLVQTLEVHKRIHILQQS 174
++ +K LEQ +Q LE+ K + LQ S
Sbjct: 113 VSSIKSLEQTLQKLEMQK-LEKLQYS 137
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 127 (49.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 34/110 (30%), Positives = 53/110 (48%)
Query: 57 AKTNSSTCXXXXXXXXXXESRPLEPPLACHLRKRRRTRSVKNIEEVESQRMTHIFVERNR 116
AK+ S SR + PP R R+R R N E + + H+ ER R
Sbjct: 476 AKSESDHSDLEASVREVESSRVVAPPPEAEKRPRKRGRKPANGRE---EPLNHVEAERQR 532
Query: 117 RKQMKNYLSVLRSLMPPSYVQRGDQASIVGGAINYVKELEQLVQTLEVHK 166
R+++ LR+++P V + D+AS++G AI+Y+ EL + LE K
Sbjct: 533 REKLNQRFYALRAVVPN--VSKMDKASLLGDAISYINELRGKLTALETDK 580
Score = 56 (24.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 19/86 (22%), Positives = 40/86 (46%)
Query: 223 DIEVTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVATFDNQVLYTFSVKVEE 282
+IE + A I++ + +++T L L V H +V+ + ++ +VK+
Sbjct: 616 EIEAKILGLEAMIRVQCHKRNHPAARLMTALRELDLDVYHASVSVVKDLMIQQVAVKMAS 675
Query: 283 GCHLRSMNEVAAAVYDMMGRVQGEAA 308
+ S +++ AA+Y + G AA
Sbjct: 676 RVY--SQDQLNAALYTRIAE-PGTAA 698
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 133 (51.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 48/200 (24%), Positives = 90/200 (45%)
Query: 91 RRTRSVKNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGAIN 150
R T+ +++ +S HI ER RR+++ L +L+P +++ D+AS++G AI
Sbjct: 109 RGTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPG--LKKMDKASVLGDAIK 166
Query: 151 YVKELEQLVQTLEVHKRIHILQQSDDHDHDDAGXXXXXXXXXXXXPQYSDFRPNDSRESS 210
++K L++ V+ E +Q + + Q S +D +S
Sbjct: 167 HIKYLQESVKEYE--------EQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNS 218
Query: 211 STAPKKPSGPVADIEVTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVA---- 266
S S + +IEV ++ + IKIL + + K++ LGL + + NV
Sbjct: 219 S------SSNLPEIEVRVSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNVLPFGP 272
Query: 267 TFDNQVLY----TFSVKVEE 282
TFD ++ F +K+E+
Sbjct: 273 TFDISIIAQKNNNFDMKIED 292
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 52/198 (26%), Positives = 90/198 (45%)
Query: 105 QRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGAINYVKELEQLVQTLEV 164
Q+ ++ ER RRK++ +L LRSL+P + + D+ASI+G AI+Y+ L++ V+ L+
Sbjct: 282 QQCKNLEAERKRRKKLNGHLYKLRSLVPN--ITKMDRASILGDAIDYIVGLQKQVKELQD 339
Query: 165 H-KRIHILQQSDDH--DHDDAGXXXXXXXXXXXXPQYSDFRP------NDSRESSS---- 211
+ H+ + D DH P +P + SR S+
Sbjct: 340 ELEDNHVHHKPPDVLIDHPPPASLVGLDNDDASPPNSHQQQPPLAVSGSSSRRSNKDPAM 399
Query: 212 TAPKKPSGPVA------DIEVTMAESNAN-IKILSTRYPKQLFKMVTGFHSLGLHVLHLN 264
T K G +EV + N +++L P +++ ++LGL V+++N
Sbjct: 400 TDDKVGGGGGGGHRMEPQLEVRQVQGNELFVQVLWEHKPGGFVRLMDAMNALGLEVINVN 459
Query: 265 VATFDNQVLYTFSVKVEE 282
V T+ VL F V V +
Sbjct: 460 VTTYKTLVLNVFRVMVRD 477
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 133 (51.9 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 51/195 (26%), Positives = 82/195 (42%)
Query: 109 HIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGAINYVKELEQLVQTLEVHKRI 168
++ ER RRK++ + L +LRS++P + + D+ASI+G AI Y+KEL Q +I
Sbjct: 337 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIEYLKELLQ---------KI 385
Query: 169 HILQQSDDHDHDDAGXXXXXXXXXXXXPQYSDFRPNDSRESSSTAPKKPSGPVADIEVTM 228
+ LQ + + P E +A P+G +EV +
Sbjct: 386 NDLQNELESSPATSSLPPTPTSFHPLTPTLPTLPSRIKEEICPSALPSPTGQQPRVEVRL 445
Query: 229 AESNA-NIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVATFDNQVLYTFSVK-VEEGCHL 286
E A NI + R P L + LGL V ++ F+ L F + ++G L
Sbjct: 446 REGRAVNIHMFCARRPGLLLSAMRAVEGLGLDVQQAVISCFNGFTLDIFKAEQCKDGPGL 505
Query: 287 RSMNEVAAAVYDMMG 301
E+ A + G
Sbjct: 506 LP-EEIKAVLMQSAG 519
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 132 (51.5 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 43/176 (24%), Positives = 79/176 (44%)
Query: 109 HIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGAINYVKELEQLVQTLEVHKRI 168
++ ER RRK++ + L LRSL+P + + D+ASI+G AINYVKEL+ + E+ +
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVPR--ITKLDRASILGDAINYVKELQN--EAKELQDEL 370
Query: 169 HILQQSDD-HDHDDAGXXXXXXXXXXXXPQYS-DFRPNDSRESSSTAPKKPSGPVADIEV 226
+++D + G P S + ++ G + +V
Sbjct: 371 EENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQV 430
Query: 227 TMAESNAN---IKILSTRYPKQLFKMVTGFHSLGLHVLHLNVATFDNQVLYTFSVK 279
+A+ + +K++ P +++ SLGL V + N + + V F V+
Sbjct: 431 DVAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVFKVE 486
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 118 (46.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/71 (35%), Positives = 46/71 (64%)
Query: 93 TRSVKNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGAINYV 152
T ++ +++E Q ++ ER RRK++ + LS+LRS++P + + D+ SI+G AI+Y+
Sbjct: 136 TNKKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPK--ITKMDRTSILGDAIDYM 193
Query: 153 KELEQLVQTLE 163
KEL + L+
Sbjct: 194 KELLDKINKLQ 204
Score = 46 (21.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 15/58 (25%), Positives = 24/58 (41%)
Query: 225 EVTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVATFDNQVLYTFSVKVEE 282
EV E N +I I P + V+ +LGL + ++ F + L +V E
Sbjct: 233 EVDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGE 290
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 106 (42.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 31/101 (30%), Positives = 53/101 (52%)
Query: 83 LACHLRKRRRTRSVKNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQA 142
+A R ++R R N E + + H+ ER RR+++ LR+++P V + D+A
Sbjct: 430 VAVEKRPKKRGRKPANGRE---EPLNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKA 484
Query: 143 SIVGGAINYVKELEQLVQTLEVHKRIHILQQSDDHDHDDAG 183
S++G AI Y+ EL+ V E K + I Q ++ + AG
Sbjct: 485 SLLGDAIAYINELKSKVVKTESEK-LQIKNQLEEVKLELAG 524
Score = 65 (27.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 21/93 (22%), Positives = 49/93 (52%)
Query: 209 SSSTAPKKPSGPVADIEVTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVATF 268
SSS + KP G +IEV + +A I++ S++ ++++ L L V H +++
Sbjct: 535 SSSCSSIKPVG--MEIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVV 592
Query: 269 DNQVLYTFSVKVEEGCHLRSMNEVAAAVYDMMG 301
++ ++ +VK+ G + + ++ A++ +G
Sbjct: 593 NDLMIQQATVKM--GFRIYTQEQLRASLISKIG 623
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 120 (47.3 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 88 RKRRRTRSVKNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGG 147
R R+R R N E + + H+ ER RR+++ LRS++P + + D+AS++G
Sbjct: 378 RPRKRGRKPANGRE---EPLNHVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLGD 432
Query: 148 AINYVKELEQLVQTLE 163
AI+Y+KEL++ V+ +E
Sbjct: 433 AISYIKELQEKVKIME 448
Score = 48 (22.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 16/92 (17%), Positives = 40/92 (43%)
Query: 206 SRESSSTAPKKPSGPVADIEVTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNV 265
S S+T + S P DI+ E ++++S +++ + + ++ +
Sbjct: 457 SLSESNTITVEES-PEVDIQAMNEE--VVVRVISPLDSHPASRIIQAMRNSNVSLMEAKL 513
Query: 266 ATFDNQVLYTFSVKVEEGCHLRSMNEVAAAVY 297
+ ++ + +TF +K G + ++ AA Y
Sbjct: 514 SLAEDTMFHTFVIKSNNGSDPLTKEKLIAAFY 545
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 120 (47.3 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 24/55 (43%), Positives = 40/55 (72%)
Query: 109 HIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGAINYVKELEQLVQTLE 163
++ ER RRK++ + LS+LRS++P + + D+ SI+G I+YVKEL + ++TLE
Sbjct: 183 NLMAERRRRKRLNDRLSMLRSIVPK--ISKMDRTSILGDTIDYVKELTERIKTLE 235
Score = 44 (20.5 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 16/79 (20%), Positives = 31/79 (39%)
Query: 223 DIEVTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVATFDNQVLYTFSVKVEE 282
D+E N I+I P L V+ LGL + V+ F + + ++ +
Sbjct: 271 DVE-NRGSGNTRIEICCPANPGVLLSTVSALEVLGLEIEQCVVSCFSDFGMQASCLQEDG 329
Query: 283 GCHLRSMNEVAAAVYDMMG 301
+ S +E+ ++ G
Sbjct: 330 KRQVVSTDEIKQTLFRSAG 348
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 123 (48.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 36/124 (29%), Positives = 63/124 (50%)
Query: 97 KNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGAINYVKELE 156
K +++E Q ++ ER RRK++ + LS+LRS++P + + D+ SI+G AI+Y+KEL
Sbjct: 167 KKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPK--ISKMDRTSILGDAIDYMKELL 224
Query: 157 QLVQTLEVHKRIHILQQSDDHDHD----DAGXXXXXXXXXXXXPQYS-DFRPNDSRESSS 211
+ L+ ++ L S++ H D P++ D R D+R
Sbjct: 225 DKINKLQDEEQE--LGNSNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDRRDEDTRVDIC 282
Query: 212 TAPK 215
+PK
Sbjct: 283 CSPK 286
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 105 (42.0 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 90 RRRTRSVKNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGAI 149
R+ T+ + +S HI ER RR+++ L +L+P +++ D+AS++G A+
Sbjct: 134 RKGTKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPG--LKKMDKASVLGDAL 191
Query: 150 NYVKELEQLVQTLEVHKR 167
++K L++ V LE K+
Sbjct: 192 KHIKYLQERVGELEEQKK 209
Score = 54 (24.1 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 21/89 (23%), Positives = 37/89 (41%)
Query: 204 NDSRESSSTAPKKPSGPVADIEVTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHL 263
N+ SSS + +IEV ++ + IKIL + L K++ L + + +
Sbjct: 229 NNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNS 288
Query: 264 NVATFDNQVLYTFSVKVEEGCHLRSMNEV 292
+V F + T K E + M+ V
Sbjct: 289 SVLNFGPTLDITIIAKKESDFDMTLMDVV 317
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 106 (42.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 23/79 (29%), Positives = 45/79 (56%)
Query: 88 RKRRRTRSVKNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGG 147
R R+R R N ++ + H+ ER RR+++ LRS++P + + D+AS++G
Sbjct: 416 RPRKRGRRPAN---GRAEALNHVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLGD 470
Query: 148 AINYVKELEQLVQTLEVHK 166
A++Y+ EL ++ +E +
Sbjct: 471 AVSYINELHAKLKVMEAER 489
Score = 58 (25.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 18/76 (23%), Positives = 32/76 (42%)
Query: 207 RESSSTAPKKPSGPVADIEVTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVA 266
RE + P +DI V + + ++I ++ F + V++ N+
Sbjct: 489 RERLGYSSNPPISLDSDINVQTSGEDVTVRINCPLESHPASRIFHAFEESKVEVINSNLE 548
Query: 267 TFDNQVLYTFSVKVEE 282
+ VL+TF VK EE
Sbjct: 549 VSQDTVLHTFVVKSEE 564
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 105 (42.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 22/55 (40%), Positives = 38/55 (69%)
Query: 109 HIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGAINYVKELEQLVQTLE 163
HI ER RR+++ L +++P +++ D+A+I+G A+ YVKEL++ V+TLE
Sbjct: 168 HIIAERRRREKINQRFIELSTVIPG--LKKMDKATILGDAVKYVKELQEKVKTLE 220
Score = 51 (23.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 17/75 (22%), Positives = 33/75 (44%)
Query: 206 SRESSSTAPKKPSGPVADIEVTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNV 265
S S+ G V +IEV + E + +++ L ++++ L L + H +V
Sbjct: 239 SGRQSAAGDGDGEGRVPEIEVRVWERSVLVRVQCGNSRGLLVRLLSEVEELRLGITHTSV 298
Query: 266 ATFD-NQVLYTFSVK 279
F + V+ T + K
Sbjct: 299 MPFPASTVIITITAK 313
>TAIR|locus:504956298 [details] [associations]
symbol:AT1G62975 "AT1G62975" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC011000
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000090029 EMBL:AF506369 EMBL:BT006408
EMBL:AK228036 IPI:IPI00535945 PIR:F96654 RefSeq:NP_683462.1
UniGene:At.70486 ProteinModelPortal:Q9LQ08 SMR:Q9LQ08
EnsemblPlants:AT1G62975.1 GeneID:842600 KEGG:ath:AT1G62975
TAIR:At1g62975 eggNOG:NOG241874 InParanoid:Q9LQ08 OMA:YGANEAN
PhylomeDB:Q9LQ08 ProtClustDB:CLSN2690474 Genevestigator:Q9LQ08
Uniprot:Q9LQ08
Length = 259
Score = 112 (44.5 bits), Expect = 0.00044, P = 0.00044
Identities = 27/75 (36%), Positives = 46/75 (61%)
Query: 97 KNIEEVESQRMTHIFVERNRRKQMKNYLSVLRSLMPPSYVQ--RGDQASIVGGAINYVKE 154
KN ++ ES++M H +ER RR+++ + LR+L+P Y+Q R IV A+NY+K+
Sbjct: 66 KNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQ-AVNYIKD 124
Query: 155 LEQLVQTL-EVHKRI 168
L+ ++ L E R+
Sbjct: 125 LQIKIKELNEKRNRV 139
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 114 (45.2 bits), Expect = 0.00053, P = 0.00053
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 109 HIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGAINYVKELEQLVQTLEVHKRI 168
H+ ER RR+++ +L+SL+P + + D+ASI+ I Y+KELE+ VQ LE K++
Sbjct: 189 HVMSERRRREKLNEMFLILKSLVPS--IDKVDKASILSETIAYLKELERRVQELESGKKV 246
>UNIPROTKB|Q6YYG9 [details] [associations]
symbol:OSJNBa0051E21.18 "Putative uncharacterized protein
OSJNBa0051E21.18" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG272533 EMBL:AP005611
ProteinModelPortal:Q6YYG9 Gramene:Q6YYG9 Uniprot:Q6YYG9
Length = 327
Score = 113 (44.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 105 QRMTHIFVERNRRKQMKNYLSVLRSLMPP----------SYVQRGDQASIVGGAINYVKE 154
+RM HIF ER RR+++KN + LR L+P + + D+A+IVG AI++++
Sbjct: 92 ERM-HIFAERERRRKIKNMFTDLRDLVPSLTNKCGDVMDEMMFQADKATIVGEAISFIRS 150
Query: 155 LEQLVQTLEVHKR 167
LE+ V LE KR
Sbjct: 151 LEETVADLERRKR 163
Score = 37 (18.1 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 209 SSSTAPKKPSGPVA 222
SSS+AP P P A
Sbjct: 181 SSSSAPPPPPPPAA 194
>UNIPROTKB|Q7X8R0 [details] [associations]
symbol:OSJNBa0083N12.3 "OSJNBa0083N12.3 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 EMBL:CM000141 eggNOG:NOG254981 EMBL:AL606683
RefSeq:NP_001053749.1 UniGene:Os.49995
EnsemblPlants:LOC_Os04g51070.1 GeneID:4336865 KEGG:osa:4336865
OMA:RASIVGD ProtClustDB:CLSN2695079 Uniprot:Q7X8R0
Length = 464
Score = 115 (45.5 bits), Expect = 0.00059, P = 0.00059
Identities = 43/178 (24%), Positives = 72/178 (40%)
Query: 113 ERNRRKQMKNYLSVLRSLMP-PSYVQRGDQASIVGGAINYVKELEQLVQTLEVHKRIHIL 171
ER RR+Q+ LR L P P+ + D+ASIVG AI Y+ EL + V K + IL
Sbjct: 270 ERERREQLNVKFRTLRMLFPNPT---KNDRASIVGDAIEYIDELNRTV------KELKIL 320
Query: 172 QQSDDHDHDDAGXXXXXXXXXXXXPQYSDFRP-NDSRESSSTAPKKPS-----GPVADIE 225
+ H ++ + S RP D +++ + S ++
Sbjct: 321 VEQKRHGNNRRKVLKLDQEAAADG-ESSSMRPVRDDQDNQLHGAIRSSWVQRRSKECHVD 379
Query: 226 VTMAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVATFDNQVLYTFSVKVEEG 283
V + + NIK+ + L L ++H+ + ++ F+ KV EG
Sbjct: 380 VRIVDDEVNIKLTEKKKANSLLHAAKVLDEFQLELIHVVGGIIGDHHIFMFNTKVSEG 437
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 110 (43.8 bits), Expect = 0.00076, P = 0.00076
Identities = 42/178 (23%), Positives = 85/178 (47%)
Query: 109 HIFVERNRRKQMKNYLSVLRSLMPPSYVQRGDQASIVGGAINYVKELEQLVQTLEVHKRI 168
++ ERNRR+++ L LRS++P + + D+AS++ +I+Y++EL +TLE R
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPN--ISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 169 ----HILQQSDDHDHDDAGXXXXXXXXXXXXPQYSDFRPNDSRESS-STAPKKPSGPVAD 223
L ++ D+D +D R ++ ST + V +
Sbjct: 113 LESRSTLLENPVRDYD----CNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLE 168
Query: 224 IEVT-MAESNANIKILSTRYPKQLFKMVTGFHSLGLHVLHLNVATFDNQVLYTFSVKV 280
++VT M E + I ++ + + ++ SL L++L N ++F +++ T ++V
Sbjct: 169 MKVTWMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQV 226
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 310 288 0.00087 115 3 11 22 0.39 34
33 0.43 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 40
No. of states in DFA: 604 (64 KB)
Total size of DFA: 187 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.55u 0.14s 22.69t Elapsed: 00:00:01
Total cpu time: 22.56u 0.14s 22.70t Elapsed: 00:00:01
Start: Fri May 10 10:04:39 2013 End: Fri May 10 10:04:40 2013