Query 043621
Match_columns 103
No_of_seqs 29 out of 31
Neff 2.4
Searched_HMMs 46136
Date Fri Mar 29 06:42:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043621.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043621hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF07442 Ponericin: Ponericin; 40.6 25 0.00054 20.7 1.8 15 88-102 1-15 (29)
2 COG5223 Uncharacterized conser 36.5 19 0.0004 29.6 1.1 23 68-102 23-45 (240)
3 smart00307 ILWEQ I/LWEQ domain 30.5 89 0.0019 24.6 4.0 52 23-74 83-146 (200)
4 PF14013 MT0933_antitox: MT093 29.4 97 0.0021 19.3 3.3 44 41-102 5-48 (51)
5 KOG0883 Cyclophilin type, U bo 21.8 96 0.0021 28.0 3.0 39 56-97 449-487 (518)
6 COG0537 Hit Diadenosine tetrap 18.6 96 0.0021 22.0 2.0 33 27-59 57-91 (138)
7 smart00099 btg1 tob/btg1 famil 16.8 1.8E+02 0.0039 21.0 3.0 38 55-102 3-40 (108)
8 cd08071 MPN_DUF2466 Mov34/MPN/ 16.2 2.1E+02 0.0046 19.7 3.2 25 18-43 69-93 (113)
9 PF04930 FUN14: FUN14 family; 16.1 2.6E+02 0.0056 18.7 3.6 41 50-102 43-83 (100)
10 KOG3237 Uncharacterized conser 14.0 1.1E+02 0.0025 25.3 1.6 25 66-102 22-46 (250)
No 1
>PF07442 Ponericin: Ponericin; InterPro: IPR010002 This family contains a number of ponericin peptides (approximately 30 residues long) from the venom of the predatory ant Pachycondyla goeldii (Ponerine ant). These peptides exhibit antibacterial and insecticidal properties, and may adopt an amphipathic alpha-helical structure in polar environments such as cell membranes [].; GO: 0005576 extracellular region
Probab=40.59 E-value=25 Score=20.68 Aligned_cols=15 Identities=33% Similarity=0.550 Sum_probs=12.7
Q ss_pred cHHHHHHHHHHhhhh
Q 043621 88 VYEDYLKIAEGLIRK 102 (103)
Q Consensus 88 g~G~Y~~~AegyL~k 102 (103)
|.-+++++|.++|++
T Consensus 1 g~kdw~k~~~~wlkk 15 (29)
T PF07442_consen 1 GWKDWLKKAGEWLKK 15 (29)
T ss_pred CHHHHHHHHHHHHHh
Confidence 456899999999986
No 2
>COG5223 Uncharacterized conserved protein [Function unknown]
Probab=36.53 E-value=19 Score=29.58 Aligned_cols=23 Identities=30% Similarity=0.625 Sum_probs=19.3
Q ss_pred hhhhccCCCCCCCCCCCCCCcHHHHHHHHHHhhhh
Q 043621 68 GSRYGNSKTNPSGGHKDSGGVYEDYLKIAEGLIRK 102 (103)
Q Consensus 68 as~YGKLde~~sgg~~~sGgg~G~Y~~~AegyL~k 102 (103)
-.+||+|+.. -+|++.|++|=+|
T Consensus 23 RrkyG~LEK~------------KDyvkRaqd~~~k 45 (240)
T COG5223 23 RRKYGKLEKK------------KDYVKRAQDINKK 45 (240)
T ss_pred hhhhhhHHHH------------HHHHHHHHHHHHh
Confidence 3689999977 7899999999654
No 3
>smart00307 ILWEQ I/LWEQ domain. Thought to possess an F-actin binding function.
Probab=30.53 E-value=89 Score=24.56 Aligned_cols=52 Identities=23% Similarity=0.192 Sum_probs=29.4
Q ss_pred CCCChHHHHhhhHHHHHHHHH---hhcc----cccc---cch--hhHhhhHHhHHhhhhhhccC
Q 043621 23 HQPSNAELLSSAKLVADAAKD---TLNS----DHDK---VDK--TKVAHAAGDLLNAGSRYGNS 74 (103)
Q Consensus 23 ~~pSs~eL~sSAKlVaeAAqs---a~~~----esek---vDK--~kVAgAAaDlL~Aas~YGKL 74 (103)
..++..+|++.||-||.+... +.+- +|+. +-. ..|+.|.+.|+.++...=..
T Consensus 83 g~~~~E~LI~aAk~VAasTaQLVaAsrvka~~~S~~~~~L~~Ask~V~~At~~LVaaak~~~~~ 146 (200)
T smart00307 83 GKGSEEELIVAAKEVAASTAQLVAASRVKADKDSQAQDRLQAASKAVTNATANLVAAVKSGMIF 146 (200)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677888888877766543 2221 1111 111 26777778887777655443
No 4
>PF14013 MT0933_antitox: MT0933-like antitoxin protein
Probab=29.41 E-value=97 Score=19.32 Aligned_cols=44 Identities=32% Similarity=0.555 Sum_probs=26.3
Q ss_pred HHHhhcccccccchhhHhhhHHhHHhhhhhhccCCCCCCCCCCCCCCcHHHHHHHHHHhhhh
Q 043621 41 AKDTLNSDHDKVDKTKVAHAAGDLLNAGSRYGNSKTNPSGGHKDSGGVYEDYLKIAEGLIRK 102 (103)
Q Consensus 41 Aqsa~~~esekvDK~kVAgAAaDlL~Aas~YGKLde~~sgg~~~sGgg~G~Y~~~AegyL~k 102 (103)
|+..+++..++|| ..-.-|+|.++ ++ -||-|.+-|+++++-+++
T Consensus 5 ak~~~~~~~dk~~--~~iDKA~d~vd---------~k-------TGgKy~dqId~~~d~a~~ 48 (51)
T PF14013_consen 5 AKDLASKNPDKID--QGIDKAGDFVD---------EK-------TGGKYSDQIDKAQDKAKD 48 (51)
T ss_pred HHHHHHHChHHHH--HHHHHHHHHHH---------hh-------cCCchHHHHHHHHHHHHh
Confidence 4555666666766 23344444444 22 356788888888876653
No 5
>KOG0883 consensus Cyclophilin type, U box-containing peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=21.75 E-value=96 Score=27.97 Aligned_cols=39 Identities=23% Similarity=0.219 Sum_probs=22.0
Q ss_pred hHhhhHHhHHhhhhhhccCCCCCCCCCCCCCCcHHHHHHHHH
Q 043621 56 KVAHAAGDLLNAGSRYGNSKTNPSGGHKDSGGVYEDYLKIAE 97 (103)
Q Consensus 56 kVAgAAaDlL~Aas~YGKLde~~sgg~~~sGgg~G~Y~~~Ae 97 (103)
+..+.-.|++..++ +-+..-+-..+..|+|+|.||+.|-
T Consensus 449 ~~k~~~e~~~k~~s---~~~~~~s~~~~~~~~gVGKYlk~~~ 487 (518)
T KOG0883|consen 449 RLKEEEEDNLKRTS---SQPKSGSTTPHALGAGVGKYLKKAA 487 (518)
T ss_pred Hhhccchhhhhhhc---cCccccCCCcccccccHHHHHHHHh
Confidence 34445556666655 1111112224556789999999874
No 6
>COG0537 Hit Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only]
Probab=18.55 E-value=96 Score=22.03 Aligned_cols=33 Identities=30% Similarity=0.320 Sum_probs=26.6
Q ss_pred hHHHHhhhHHHHHHHHHhhcccc--cccchhhHhh
Q 043621 27 NAELLSSAKLVADAAKDTLNSDH--DKVDKTKVAH 59 (103)
Q Consensus 27 s~eL~sSAKlVaeAAqsa~~~es--ekvDK~kVAg 59 (103)
.++||.-++.|+.|.+.+|.-+. ..++.++.||
T Consensus 57 ~~~l~~~~~~ia~al~~~~~~~g~ni~~N~g~~ag 91 (138)
T COG0537 57 LAELFLLAQKIAKALKEAFGADGYNIGINNGKAAG 91 (138)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEEEecCcccC
Confidence 67899999999999999988443 5677777666
No 7
>smart00099 btg1 tob/btg1 family. The tob/btg1 is a family of proteins that inhibit cell proliferation.
Probab=16.77 E-value=1.8e+02 Score=20.95 Aligned_cols=38 Identities=11% Similarity=0.071 Sum_probs=23.2
Q ss_pred hhHhhhHHhHHhhhhhhccCCCCCCCCCCCCCCcHHHHHHHHHHhhhh
Q 043621 55 TKVAHAAGDLLNAGSRYGNSKTNPSGGHKDSGGVYEDYLKIAEGLIRK 102 (103)
Q Consensus 55 ~kVAgAAaDlL~Aas~YGKLde~~sgg~~~sGgg~G~Y~~~AegyL~k 102 (103)
.+|+.|..=|..-..+||+|+.. -++.+.+.-+.+|..
T Consensus 3 ~EI~~av~Fl~~~l~~~~~l~~~----------~v~~F~~~L~~~L~~ 40 (108)
T smart00099 3 LEIAAAVNFITSLLRKHNKLSKR----------RVEIFAEKLTRLLKE 40 (108)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHH----------HHHHHHHHHHHHHHH
Confidence 34555555555566677777765 456666666666643
No 8
>cd08071 MPN_DUF2466 Mov34/MPN/PAD-1 family. Mov34 DUF2466 (also known as DNA repair protein RadC) domain of unknown function contains the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity. However, to date, the name RadC has been misleading and no function has been determined.
Probab=16.23 E-value=2.1e+02 Score=19.65 Aligned_cols=25 Identities=20% Similarity=0.357 Sum_probs=20.3
Q ss_pred CCCCCCCCChHHHHhhhHHHHHHHHH
Q 043621 18 KPAKNHQPSNAELLSSAKLVADAAKD 43 (103)
Q Consensus 18 ~~~~~~~pSs~eL~sSAKlVaeAAqs 43 (103)
+|+..-.||..|+.-. +-+.+|++.
T Consensus 69 HPsG~~~PS~~D~~~T-~~l~~~~~~ 93 (113)
T cd08071 69 HPSGDPTPSREDIELT-KRLKEAGEL 93 (113)
T ss_pred CCCCCCCCCHHHHHHH-HHHHHHHHH
Confidence 7888888999999888 667777764
No 9
>PF04930 FUN14: FUN14 family; InterPro: IPR007014 This is a family of short proteins found in eukaryotes and some archaea. Although the function of these proteins is not known they may contain transmembrane helices.
Probab=16.10 E-value=2.6e+02 Score=18.75 Aligned_cols=41 Identities=12% Similarity=0.140 Sum_probs=31.2
Q ss_pred cccchhhHhhhHHhHHhhhhhhccCCCCCCCCCCCCCCcHHHHHHHHHHhhhh
Q 043621 50 DKVDKTKVAHAAGDLLNAGSRYGNSKTNPSGGHKDSGGVYEDYLKIAEGLIRK 102 (103)
Q Consensus 50 ekvDK~kVAgAAaDlL~Aas~YGKLde~~sgg~~~sGgg~G~Y~~~AegyL~k 102 (103)
-+||..||-....+.++... ++++.. -+....+++.++|..
T Consensus 43 i~Vnw~kl~~~~~~~~~~~~--~~~~~~----------~~~~~~~~~~~~l~~ 83 (100)
T PF04930_consen 43 IKVNWDKLEKDVKKALDQNK--GKFDAP----------DIKSLWNKLMDFLKS 83 (100)
T ss_pred EEECHHHHHHHHHHHHHhhc--ccccch----------hHHHHHHHHHHHHHc
Confidence 67999999988888887776 677755 446678888888753
No 10
>KOG3237 consensus Uncharacterized conserved protein [Function unknown]
Probab=13.99 E-value=1.1e+02 Score=25.29 Aligned_cols=25 Identities=32% Similarity=0.486 Sum_probs=20.8
Q ss_pred hhhhhhccCCCCCCCCCCCCCCcHHHHHHHHHHhhhh
Q 043621 66 NAGSRYGNSKTNPSGGHKDSGGVYEDYLKIAEGLIRK 102 (103)
Q Consensus 66 ~Aas~YGKLde~~sgg~~~sGgg~G~Y~~~AegyL~k 102 (103)
.+=.+||.|+-+ -||+..|++|=+|
T Consensus 22 ~~Rrk~G~LEKk------------KDY~~RA~dy~kK 46 (250)
T KOG3237|consen 22 EARRKYGFLEKK------------KDYKKRAQDYHKK 46 (250)
T ss_pred hHHHhhhhHHhh------------hHHHHHHHHHHHH
Confidence 456789999977 7899999999654
Done!