Query 043621
Match_columns 103
No_of_seqs 29 out of 31
Neff 2.4
Searched_HMMs 13730
Date Mon Mar 25 11:16:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043621.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/043621hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1sj8a2 a.216.1.1 (A:658-782) 61.2 8.2 0.0006 24.1 5.0 44 26-69 7-57 (125)
2 d1qkra_ a.24.9.1 (A:) Vinculin 37.3 8.9 0.00065 26.4 2.3 20 24-43 61-80 (181)
3 d1u89a1 a.216.1.1 (A:752-889) 33.9 30 0.0022 22.0 4.4 17 27-43 68-84 (138)
4 d1t01a1 a.24.9.1 (A:1-125) Vin 23.4 45 0.0033 21.4 3.9 39 30-69 81-120 (125)
5 d1gg2g_ a.137.3.1 (G:) Transdu 22.8 20 0.0015 20.4 1.8 27 50-76 16-42 (54)
6 d1dova_ a.24.9.1 (A:) alpha-ca 21.7 50 0.0037 22.2 4.0 43 28-70 14-56 (181)
7 d2ieaa3 c.48.1.1 (A:701-886) P 13.0 60 0.0043 21.5 2.5 40 23-63 130-173 (186)
8 d2b0ha1 a.24.9.2 (A:1838-1973) 11.9 1.5E+02 0.011 17.9 4.1 36 27-64 17-52 (136)
9 d1seza1 c.3.1.2 (A:13-329,A:44 11.0 1.3E+02 0.0096 17.2 3.4 25 24-48 348-372 (373)
10 d1fnna2 c.37.1.20 (A:1-276) CD 10.9 1.1E+02 0.0081 18.4 3.2 30 36-65 245-274 (276)
No 1
>d1sj8a2 a.216.1.1 (A:658-782) Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=61.17 E-value=8.2 Score=24.06 Aligned_cols=44 Identities=27% Similarity=0.156 Sum_probs=31.4
Q ss_pred ChHHHHhhhHHHHHHHHHhh-------cccccccchhhHhhhHHhHHhhhh
Q 043621 26 SNAELLSSAKLVADAAKDTL-------NSDHDKVDKTKVAHAAGDLLNAGS 69 (103)
Q Consensus 26 Ss~eL~sSAKlVaeAAqsa~-------~~esekvDK~kVAgAAaDlL~Aas 69 (103)
+...|+..||.|+++.+.-+ ..-.|...+.+|..++-.|....+
T Consensus 7 ~~e~Li~~AK~va~a~~~Lv~~ak~~a~~~~d~~~q~~Li~aa~~v~~~t~ 57 (125)
T d1sj8a2 7 FQDVLMQLANAVASAAAALVLKAKSVAQRTEDSGLQTQVIAAATQCALSTS 57 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTSSSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHH
Confidence 36789999999998877733 223366777888888877776653
No 2
>d1qkra_ a.24.9.1 (A:) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=37.29 E-value=8.9 Score=26.43 Aligned_cols=20 Identities=25% Similarity=0.353 Sum_probs=17.5
Q ss_pred CCChHHHHhhhHHHHHHHHH
Q 043621 24 QPSNAELLSSAKLVADAAKD 43 (103)
Q Consensus 24 ~pSs~eL~sSAKlVaeAAqs 43 (103)
.|...+|++.||.||+|+..
T Consensus 61 g~~k~dLI~aAK~iA~a~~~ 80 (181)
T d1qkra_ 61 SGNKRALIQCAKDIAKASDE 80 (181)
T ss_dssp GGGHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 35678999999999999887
No 3
>d1u89a1 a.216.1.1 (A:752-889) Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.90 E-value=30 Score=21.95 Aligned_cols=17 Identities=29% Similarity=0.573 Sum_probs=13.8
Q ss_pred hHHHHhhhHHHHHHHHH
Q 043621 27 NAELLSSAKLVADAAKD 43 (103)
Q Consensus 27 s~eL~sSAKlVaeAAqs 43 (103)
..+|++.||.|+.++..
T Consensus 68 ~~~li~aAk~va~a~~~ 84 (138)
T d1u89a1 68 AGEMVRQARILAQATSD 84 (138)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 46899999999887665
No 4
>d1t01a1 a.24.9.1 (A:1-125) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=23.38 E-value=45 Score=21.40 Aligned_cols=39 Identities=15% Similarity=0.194 Sum_probs=21.3
Q ss_pred HHhhhHHHHHHHHHhhcccc-cccchhhHhhhHHhHHhhhh
Q 043621 30 LLSSAKLVADAAKDTLNSDH-DKVDKTKVAHAAGDLLNAGS 69 (103)
Q Consensus 30 L~sSAKlVaeAAqsa~~~es-ekvDK~kVAgAAaDlL~Aas 69 (103)
+-.+++.+.+|+.. |..+. ...++..+..||-.||.+..
T Consensus 81 vr~ag~~l~~aa~~-l~~dP~s~~~R~~lV~aaR~lL~~vt 120 (125)
T d1t01a1 81 VENACTKLVRAAQM-LQADPYSVPARDYLIDGSRGILSGTS 120 (125)
T ss_dssp HHHHHHHHHHHHHH-HHHCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHhCCCChhhHHHHHHHHHHHHHHHH
Confidence 33444555555554 33333 44666666777766666543
No 5
>d1gg2g_ a.137.3.1 (G:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]}
Probab=22.78 E-value=20 Score=20.36 Aligned_cols=27 Identities=26% Similarity=0.378 Sum_probs=23.7
Q ss_pred cccchhhHhhhHHhHHhhhhhhccCCC
Q 043621 50 DKVDKTKVAHAAGDLLNAGSRYGNSKT 76 (103)
Q Consensus 50 ekvDK~kVAgAAaDlL~Aas~YGKLde 76 (103)
-.+.+-||.-+|+||+.-..+|..-|-
T Consensus 16 ~~~~RikvS~aa~~l~~y~e~~~~~Dp 42 (54)
T d1gg2g_ 16 ANIDRIKVSKAAADLMAYCEAHAKEDP 42 (54)
T ss_dssp HSSCCCCHHHHHHHHHHHHHHHGGGCT
T ss_pred hCCchhhHHHHHHHHHHHHHhcCcCCC
Confidence 358889999999999999999988774
No 6
>d1dova_ a.24.9.1 (A:) alpha-catenin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.73 E-value=50 Score=22.15 Aligned_cols=43 Identities=23% Similarity=0.311 Sum_probs=33.5
Q ss_pred HHHHhhhHHHHHHHHHhhcccccccchhhHhhhHHhHHhhhhh
Q 043621 28 AELLSSAKLVADAAKDTLNSDHDKVDKTKVAHAAGDLLNAGSR 70 (103)
Q Consensus 28 ~eL~sSAKlVaeAAqsa~~~esekvDK~kVAgAAaDlL~Aas~ 70 (103)
.++-.++..+..|++.-...-...++++.+..||-.||.+..+
T Consensus 14 ~~v~~ag~~l~~aa~~~~~dp~s~~~R~~lv~aaR~lLs~vt~ 56 (181)
T d1dova_ 14 EDVRKQGDLMKSAAGEFADDPCSSVKRGNMVRAARALLSAVTR 56 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCCChHhHHHHHHHHHHHHHHHHH
Confidence 4666778888888886444444678899999999999988765
No 7
>d2ieaa3 c.48.1.1 (A:701-886) Pyruvate dehydrogenase E1 component, C-domain {Escherichia coli [TaxId: 562]}
Probab=12.97 E-value=60 Score=21.52 Aligned_cols=40 Identities=30% Similarity=0.282 Sum_probs=27.2
Q ss_pred CCCChHHHHhh----hHHHHHHHHHhhcccccccchhhHhhhHHh
Q 043621 23 HQPSNAELLSS----AKLVADAAKDTLNSDHDKVDKTKVAHAAGD 63 (103)
Q Consensus 23 ~~pSs~eL~sS----AKlVaeAAqsa~~~esekvDK~kVAgAAaD 63 (103)
.+.+-.+|+.- +.=|+++|.++|.++ .+|++..|+.|..+
T Consensus 130 ~S~~~~~L~~~Fgi~~~~Iv~aAl~~L~~~-g~i~~~~~~~a~~~ 173 (186)
T d2ieaa3 130 RSDSRENLRHHFEVDASYVVVAALGELAKR-GEIDKKVVADAIAK 173 (186)
T ss_dssp CCSCHHHHHHHTTCSHHHHHHHHHHHHHHT-TSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHcCCCHHHHHHHHHHHHHHc-CCcCHHHHHHHHHH
Confidence 34556777763 455777788888766 47888888766544
No 8
>d2b0ha1 a.24.9.2 (A:1838-1973) Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=11.87 E-value=1.5e+02 Score=17.94 Aligned_cols=36 Identities=14% Similarity=0.287 Sum_probs=21.8
Q ss_pred hHHHHhhhHHHHHHHHHhhcccccccchhhHhhhHHhH
Q 043621 27 NAELLSSAKLVADAAKDTLNSDHDKVDKTKVAHAAGDL 64 (103)
Q Consensus 27 s~eL~sSAKlVaeAAqsa~~~esekvDK~kVAgAAaDl 64 (103)
-.+|+.++|=|+.+++.....- +-+..+++.+|-++
T Consensus 17 Q~~~~~~ak~l~~~~~~lv~~a--~~~~~~L~~~a~~~ 52 (136)
T d2b0ha1 17 QTTMVRTAKAIAVTVQEMVTKS--NTSPEELGPLANQL 52 (136)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT--TTCSSTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHc--cCCHHHHHHHHHHH
Confidence 3678889998888888755422 22334455544443
No 9
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=11.02 E-value=1.3e+02 Score=17.18 Aligned_cols=25 Identities=32% Similarity=0.097 Sum_probs=19.5
Q ss_pred CCChHHHHhhhHHHHHHHHHhhccc
Q 043621 24 QPSNAELLSSAKLVADAAKDTLNSD 48 (103)
Q Consensus 24 ~pSs~eL~sSAKlVaeAAqsa~~~e 48 (103)
.++-..-|+|++.+|+.+.+-++..
T Consensus 348 g~~~~~A~~~G~~aA~~i~~~L~~~ 372 (373)
T d1seza1 348 GLSVGKALSSGCNAADLVISYLESV 372 (373)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHSSC
T ss_pred chhHHHHHHHHHHHHHHHHHHHhcC
Confidence 3567788999999999888877653
No 10
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=10.90 E-value=1.1e+02 Score=18.41 Aligned_cols=30 Identities=10% Similarity=0.237 Sum_probs=20.0
Q ss_pred HHHHHHHHhhcccccccchhhHhhhHHhHH
Q 043621 36 LVADAAKDTLNSDHDKVDKTKVAHAAGDLL 65 (103)
Q Consensus 36 lVaeAAqsa~~~esekvDK~kVAgAAaDlL 65 (103)
++-.|+..|..+....|+-.-|-.|+..||
T Consensus 245 ll~~a~~~A~~~~~~~I~~edv~~A~~~~~ 274 (276)
T d1fnna2 245 ILYRSAYAAQQNGRKHIAPEDVRKSSKEVL 274 (276)
T ss_dssp HHHHHHHHHHHTTCSSCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCCCcCHHHHHHHHHHHh
Confidence 344455556666667788777777777765
Done!