BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 043622
         (148 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
 pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
 pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
 pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
 pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
 pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
 pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
 pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
          Length = 494

 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/95 (23%), Positives = 41/95 (43%)

Query: 32  ALPIVGHLYLIFKNKPLHRTLSQLSSKHGPIXXXXXXXXXXXXXSSPSAVEECFTKSDVV 91
           +LP+VG L  + ++  +H    +L  K+GPI                   +E   K    
Sbjct: 15  SLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKD 74

Query: 92  FANRPRILLGEHLGYNSTSLVWSPYGSHWRNLRKL 126
           F+ RP++   +    N   + ++  G+HW+  R+L
Sbjct: 75  FSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRL 109


>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
           (P450c21)
 pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
           (P450c21)
 pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
           (P450c21)
 pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
           (P450c21)
          Length = 496

 Score = 34.7 bits (78), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 3/103 (2%)

Query: 34  PIV-GHLYLIFKNKPLHRTLSQLSSKHGPIXXXXXXXXXXXXXSSPSAVEECFTKSDVVF 92
           P+V G L+L+  N P+H  L  L+ K GP+             +S   +EE   +  V F
Sbjct: 32  PLVPGFLHLLQPNLPIH--LLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDF 89

Query: 93  ANRPRILLGEHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNT 135
           A RP+I   + +      +    Y   W+  +KL    +L  T
Sbjct: 90  AGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGT 132


>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
           Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
          Length = 507

 Score = 28.5 bits (62), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 46/108 (42%), Gaps = 14/108 (12%)

Query: 32  ALPIVGHLYLIFKNKPLHRTLSQLSSKHGPIXXXXXXXXXXXXXSSPSAVEECFTKSDVV 91
           A P++G+   +   +  H + ++L+ ++G +             +   A+ +   +    
Sbjct: 16  AWPLIGNAAAV--GQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSA 73

Query: 92  FANRP-----RILLGEHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSN 134
           FA+RP     R++ G        S+ +  Y  HW+  R+  +H ++ N
Sbjct: 74  FADRPSFASFRVVSG------GRSMAFGHYSEHWKVQRR-AAHSMMRN 114


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.320    0.134    0.410 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,068,491
Number of Sequences: 62578
Number of extensions: 90396
Number of successful extensions: 239
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 236
Number of HSP's gapped (non-prelim): 5
length of query: 148
length of database: 14,973,337
effective HSP length: 90
effective length of query: 58
effective length of database: 9,341,317
effective search space: 541796386
effective search space used: 541796386
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)