Query 043622
Match_columns 148
No_of_seqs 121 out of 1504
Neff 10.8
Searched_HMMs 29240
Date Mon Mar 25 11:17:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043622.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043622hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3swz_A Steroid 17-alpha-hydrox 99.9 9.7E-23 3.3E-27 148.6 8.5 124 21-147 5-130 (494)
2 3tbg_A Cytochrome P450 2D6; mo 99.9 7.8E-23 2.7E-27 148.4 6.5 117 19-138 5-123 (479)
3 3s79_A Cytochrome P450 19A1; o 99.9 2.6E-22 8.9E-27 146.5 7.5 122 21-147 42-166 (503)
4 3nxu_A Cytochrome P450 3A4; al 99.9 2.3E-22 8E-27 146.2 6.0 114 25-147 15-129 (485)
5 3qz1_A Steroid 21-hydroxylase; 99.8 7E-22 2.4E-26 144.1 5.4 118 20-147 25-142 (496)
6 3k9v_A 1,25-dihydroxyvitamin D 99.8 2E-21 6.9E-26 141.0 7.4 129 15-147 15-149 (482)
7 3pm0_A Cypib1, cytochrome P450 99.8 3.3E-21 1.1E-25 140.8 6.5 111 20-135 5-115 (507)
8 3ld6_A Lanosterol 14-alpha dem 99.8 3.7E-21 1.3E-25 139.4 5.2 119 24-147 11-129 (461)
9 3e6i_A CYPIIE1, P450-J, cytoch 99.8 2.2E-20 7.4E-25 135.5 7.6 110 20-135 6-115 (476)
10 3gw9_A Sterol 14alpha-demethyl 99.8 1.3E-20 4.5E-25 135.7 4.7 119 23-147 2-121 (450)
11 3i3k_A Lanosterol 14-alpha dem 99.8 1.8E-20 6.1E-25 135.7 5.1 120 21-147 8-129 (461)
12 1po5_A Cytochrome P450 2B4; ox 99.8 5.9E-20 2E-24 133.5 7.5 119 22-146 8-128 (476)
13 2fdv_A Cytochrome P450 2A6; CY 99.8 6E-20 2.1E-24 133.5 6.8 119 23-147 9-129 (476)
14 2hi4_A Cytochrome P450 1A2; CY 99.8 1E-19 3.5E-24 132.9 6.7 108 21-133 11-121 (495)
15 3czh_A Cytochrome P450 2R1; vi 99.8 1E-19 3.5E-24 132.5 6.5 121 21-146 9-133 (481)
16 1r9o_A Cytochrome P450 2C9; mo 99.8 8E-20 2.8E-24 132.8 4.5 117 24-146 11-129 (477)
17 2ve3_A Putative cytochrome P45 99.8 2.2E-19 7.4E-24 129.7 5.0 120 19-147 7-126 (444)
18 2ij2_A Cytochrome P450 BM3; mo 99.8 9.7E-19 3.3E-23 127.1 7.4 118 24-147 3-121 (470)
19 3n9y_A Cholesterol SIDE-chain 99.8 1.1E-18 3.6E-23 127.0 7.2 122 21-147 6-133 (487)
20 3v8d_A Cholesterol 7-alpha-mon 99.7 1.3E-19 4.5E-24 132.1 0.8 121 19-147 8-130 (491)
21 2cd8_A Cytochrome P450 monooxy 99.7 1.6E-18 5.5E-23 125.1 5.5 119 21-147 23-145 (436)
22 2cib_A Cytochrome P450 51; hem 99.7 5.2E-18 1.8E-22 122.8 7.5 115 24-147 4-119 (455)
23 3dbg_A Putative cytochrome P45 99.7 1.9E-18 6.6E-23 125.3 3.6 115 23-147 22-137 (467)
24 3dax_A Cytochrome P450 7A1; ch 99.7 1E-17 3.5E-22 122.0 0.5 117 21-146 10-129 (491)
25 1n97_A CYP175A1; electron tran 99.6 4.6E-17 1.6E-21 115.8 1.3 106 32-147 6-112 (389)
26 3b6h_A Prostacyclin synthase; 99.6 1.6E-16 5.5E-21 115.9 2.9 115 17-142 11-128 (498)
27 3b98_A Prostaglandin I2 syntha 99.6 1.3E-16 4.6E-21 115.7 1.5 117 17-146 11-130 (475)
28 1ued_A P450 OXYC, P450 monooxy 99.6 1.7E-15 5.7E-20 108.4 7.1 113 21-147 7-130 (406)
29 1jfb_A Nitric-oxide reductase 99.6 1.9E-15 6.4E-20 107.9 7.0 113 25-147 2-120 (404)
30 3mdm_A Cholesterol 24-hydroxyl 99.5 1.2E-14 4.1E-19 105.0 7.1 99 45-147 9-111 (456)
31 2zbx_A Cytochrome P450-SU1; be 99.5 1.6E-14 5.4E-19 103.5 7.4 115 24-147 5-128 (412)
32 1izo_A P450bsbeta, cytochrome 99.5 8.3E-15 2.8E-19 105.0 5.3 108 32-147 7-117 (417)
33 3awm_A Fatty acid alpha-hydrox 99.5 1.6E-14 5.6E-19 103.3 4.9 107 33-147 7-116 (415)
34 2jjn_A Cytochrome P450 113A1; 99.5 7.8E-14 2.7E-18 99.8 6.6 117 9-147 4-120 (411)
35 3ivy_A Cytochrome P450 CYP125; 99.5 1E-13 3.5E-18 99.9 6.6 117 23-147 17-149 (433)
36 1s1f_A Putative cytochrome P45 99.5 1E-13 3.5E-18 99.1 6.2 112 24-147 8-126 (406)
37 3dsk_A Cytochrome P450 74A, ch 99.4 4.8E-14 1.6E-18 102.8 4.4 121 21-147 25-161 (495)
38 3abb_A CYP105D6, cytochrome P4 99.4 1.7E-13 5.7E-18 98.0 6.5 97 45-147 23-127 (408)
39 3oo3_A OXY protein; cytochrome 99.4 1.3E-13 4.3E-18 97.9 5.6 98 45-147 11-112 (384)
40 3a4g_A Vitamin D hydroxylase; 99.4 3.1E-13 1.1E-17 96.8 7.2 97 45-147 19-120 (411)
41 3ejb_B Biotin biosynthesis cyt 99.4 3.1E-13 1.1E-17 96.4 6.9 98 45-147 12-113 (404)
42 1cpt_A Cytochrome P450-TERP; o 99.4 1.4E-13 4.8E-18 99.0 4.7 108 35-147 11-135 (428)
43 4fb2_A P450CIN; heme, monooxyg 99.4 2.2E-13 7.7E-18 97.1 5.5 98 45-147 18-117 (398)
44 2zwu_A Camphor 5-monooxygenase 99.4 3.1E-13 1.1E-17 96.9 6.1 119 20-147 7-134 (415)
45 2y5n_A MYCG, P-450-like protei 99.4 5.3E-13 1.8E-17 95.8 6.1 97 45-147 36-136 (417)
46 1z8o_A 6-deoxyerythronolide B 99.4 1.6E-12 5.4E-17 92.9 7.5 97 45-147 13-123 (404)
47 3aba_A Cytochrome P450; oxidor 99.3 1.1E-12 3.8E-17 93.7 5.5 97 45-147 18-120 (403)
48 3tyw_A Putative cytochrome P45 99.3 2.1E-12 7.2E-17 92.6 5.8 97 45-147 28-132 (417)
49 2xbk_A PIMD protein; epoxidati 99.3 3E-12 1E-16 91.6 6.4 96 45-147 25-130 (404)
50 3lxh_A Cytochrome P450; heme, 99.3 4.2E-12 1.4E-16 91.1 7.2 98 45-147 37-135 (421)
51 3dan_A Cytochrome P450 74A2; A 99.3 1.9E-12 6.4E-17 93.8 5.1 121 21-147 6-143 (473)
52 1odo_A Putative cytochrome P45 99.3 2.1E-12 7E-17 92.4 5.3 97 45-147 14-120 (408)
53 2uuq_A CYP130, cytochrome P450 99.3 2.5E-12 8.4E-17 92.2 5.4 106 35-147 11-129 (414)
54 2z36_A MOXA, cytochrome P450 t 99.3 2.8E-12 9.5E-17 91.9 5.6 97 45-147 21-128 (413)
55 2dkk_A Cytochrome P450; CYP158 99.3 5.2E-12 1.8E-16 90.5 6.6 97 45-147 26-129 (411)
56 2wm5_A CYP124, putative cytoch 99.3 3E-12 1E-16 92.3 4.6 97 46-147 44-150 (435)
57 1gwi_A CYP154C1, cytochrome P4 99.3 1E-11 3.5E-16 88.9 6.7 97 45-147 16-125 (411)
58 2z3t_A Cytochrome P450; monoxy 99.2 7.6E-12 2.6E-16 90.0 5.1 97 45-147 19-131 (425)
59 3oft_A Cytochrome P450, CYP101 99.2 5.2E-12 1.8E-16 89.9 4.1 97 45-147 23-119 (396)
60 3mgx_A Putative P450 monooxyge 99.2 1.5E-11 5.1E-16 88.2 6.2 97 46-147 37-139 (415)
61 2xkr_A CYP142, putative cytoch 99.2 1.7E-11 5.8E-16 87.4 6.4 92 45-147 17-108 (398)
62 1q5d_A P450 epoxidase; cytochr 99.2 7.6E-12 2.6E-16 89.8 3.9 95 45-147 25-128 (419)
63 3tkt_A Cytochrome P450; aromat 99.2 1.2E-11 4E-16 89.6 4.5 95 48-147 47-157 (450)
64 3r9b_A Cytochrome P450 164A2; 99.2 3.2E-11 1.1E-15 86.4 5.9 95 45-147 28-130 (418)
65 3nc3_A Cytochrome P450 CYPX; c 99.1 1.1E-11 3.9E-16 89.5 2.6 94 46-147 53-146 (441)
66 1lfk_A OXYB, P450 monooxygenas 99.1 7.3E-11 2.5E-15 84.1 5.0 91 51-147 18-121 (398)
67 1io7_A Cytochrome P450 CYP119; 99.1 1.1E-10 3.8E-15 82.3 5.7 90 49-147 2-101 (368)
68 3buj_A CALO2; heme, iron, meta 99.1 4.7E-11 1.6E-15 85.0 3.3 93 46-147 13-112 (397)
69 2rfb_A Cytochrome P450; heme, 99.0 1.6E-10 5.5E-15 80.8 2.8 78 57-147 2-80 (343)
70 3rwl_A Cytochrome P450 alkane 99.0 1.2E-09 4E-14 78.6 7.4 98 45-147 37-144 (426)
71 1n40_A P450 MT2, cytochrome P4 99.0 7.3E-11 2.5E-15 84.1 0.7 93 45-147 15-115 (396)
72 3b4x_A 367AA long hypothetical 99.0 6.9E-10 2.4E-14 78.3 5.0 86 49-146 2-98 (367)
73 4dnj_A Putative cytochrome P45 98.8 1.4E-08 4.9E-13 72.7 7.7 107 32-147 19-132 (412)
74 3p3o_A Cytochrome P450; monoox 98.8 1.1E-09 3.8E-14 78.5 0.7 94 46-147 33-133 (416)
75 2wiy_A XPLA-heme, cytochrome P 98.7 7.6E-09 2.6E-13 73.7 3.9 93 46-147 20-112 (394)
76 4dxy_A Cytochrome P450, CYP101 98.3 2E-06 6.8E-11 61.8 6.3 98 45-147 36-134 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 94.8 0.0027 9.4E-08 45.1 -1.3 91 25-133 35-136 (381)
78 2diu_A KIAA0430 protein; struc 72.4 10 0.00035 21.2 4.7 61 35-96 13-75 (96)
79 1s79_A Lupus LA protein; RRM, 66.4 15 0.0005 20.5 6.8 54 35-92 15-76 (103)
80 3lqv_A PRE-mRNA branch site pr 60.6 20 0.00068 20.0 7.5 57 25-86 3-65 (115)
81 3ctr_A Poly(A)-specific ribonu 53.3 14 0.00049 20.9 2.9 52 45-96 15-69 (101)
82 1whv_A Poly(A)-specific ribonu 52.1 30 0.001 19.5 4.0 42 45-86 25-67 (100)
83 1iqt_A AUF1, heterogeneous nuc 51.5 22 0.00076 17.8 4.3 41 48-88 12-61 (75)
84 2a3j_A U1 small nuclear ribonu 48.7 38 0.0013 19.7 5.3 54 34-87 32-91 (127)
85 3s6e_A RNA-binding protein 39; 47.6 38 0.0013 19.3 5.4 69 25-94 2-82 (114)
86 2mss_A Protein (musashi1); RNA 46.0 28 0.00097 17.5 6.0 42 48-89 12-62 (75)
87 2krb_A Eukaryotic translation 45.3 31 0.0011 17.7 7.4 39 48-86 20-65 (81)
88 1x4c_A Splicing factor, argini 44.4 39 0.0013 18.6 5.9 49 35-87 19-69 (108)
89 2dgx_A KIAA0430 protein; RRM d 43.0 38 0.0013 18.1 5.3 52 35-86 13-70 (96)
90 3d2w_A TAR DNA-binding protein 42.9 38 0.0013 18.0 5.6 47 33-83 13-63 (89)
91 1nu4_A U1A RNA binding domain; 42.9 38 0.0013 18.0 5.6 53 34-86 11-69 (97)
92 3s7r_A Heterogeneous nuclear r 42.8 36 0.0012 17.7 3.7 50 34-87 14-72 (87)
93 2nlw_A Eukaryotic translation 40.5 45 0.0016 18.2 5.1 52 34-86 18-79 (105)
94 3beg_B Splicing factor, argini 39.9 49 0.0017 18.5 6.9 57 34-94 19-78 (115)
95 4fxv_A ELAV-like protein 1; RN 36.1 54 0.0018 17.8 4.8 48 35-86 23-79 (99)
96 2jwn_A Embryonic polyadenylate 35.9 59 0.002 18.2 5.0 39 48-86 49-96 (124)
97 1x4e_A RNA binding motif, sing 35.2 49 0.0017 17.0 4.8 50 33-86 7-65 (85)
98 2voo_A Lupus LA protein; RNA-b 34.7 81 0.0028 19.7 4.7 40 48-87 122-169 (193)
99 3ex7_B RNA-binding protein 8A; 33.3 67 0.0023 18.1 6.1 55 35-93 26-90 (126)
100 3pgw_S U1-70K; protein-RNA com 31.6 1.1E+02 0.0039 22.0 5.5 51 33-87 104-163 (437)
101 1x5p_A Negative elongation fac 31.1 64 0.0022 17.2 4.7 39 49-87 27-68 (97)
102 1sjq_A Polypyrimidine tract-bi 31.0 74 0.0025 17.8 5.7 50 33-86 18-70 (105)
103 2cqb_A Peptidyl-prolyl CIS-tra 30.6 66 0.0023 17.2 4.3 50 33-86 14-72 (102)
104 2dnh_A Bruno-like 5, RNA bindi 30.5 68 0.0023 17.3 4.9 49 34-86 18-74 (105)
105 4f25_A Polyadenylate-binding p 30.5 74 0.0025 17.7 5.3 50 34-87 8-64 (115)
106 3s8s_A Histone-lysine N-methyl 29.3 78 0.0027 17.6 5.1 49 34-86 9-66 (110)
107 2hvz_A Splicing factor, argini 28.7 73 0.0025 17.0 5.6 39 48-86 13-55 (101)
108 2jvr_A Nucleolar protein 3; RN 28.5 83 0.0028 17.7 5.8 49 34-86 31-85 (111)
109 2do4_A Squamous cell carcinoma 28.4 73 0.0025 17.0 4.2 50 34-87 20-77 (100)
110 2dgs_A DAZ-associated protein 27.9 74 0.0025 16.9 5.9 55 35-93 14-77 (99)
111 1whx_A Hypothetical protein ri 27.7 83 0.0028 17.4 6.2 48 48-95 23-74 (111)
112 2dnm_A SRP46 splicing factor; 27.7 77 0.0026 17.0 5.3 48 35-86 17-73 (103)
113 1sjr_A Polypyrimidine tract-bi 27.3 1.1E+02 0.0038 18.8 4.8 39 48-86 59-102 (164)
114 2cpf_A RNA binding motif prote 27.2 76 0.0026 16.8 5.0 50 34-87 8-69 (98)
115 2bz2_A Negative elongation fac 27.1 81 0.0028 17.9 3.5 38 49-86 51-91 (121)
116 1b35_D CRPV, protein (cricket 27.0 16 0.00055 17.6 0.3 11 32-42 30-40 (57)
117 2cq0_A Eukaryotic translation 27.0 80 0.0027 16.9 3.6 48 35-86 19-75 (103)
118 2cpz_A CUG triplet repeat RNA- 26.7 86 0.003 17.2 5.0 50 34-87 28-86 (115)
119 2pe8_A Splicing factor 45; RRM 26.6 88 0.003 17.3 4.4 62 32-93 9-82 (105)
120 3fgx_A Rbstp2171; structural g 26.3 42 0.0014 19.4 2.0 17 51-67 9-25 (114)
121 2err_A Ataxin-2-binding protei 26.2 87 0.003 17.2 3.5 48 35-86 33-87 (109)
122 2khc_A Testis-specific RNP-typ 26.2 89 0.003 17.3 4.4 39 48-86 53-100 (118)
123 2dnr_A Synaptojanin-1; RRM dom 26.2 89 0.003 17.2 5.8 43 47-89 27-70 (91)
124 2cq4_A RNA binding motif prote 25.5 91 0.0031 17.1 4.7 38 48-85 38-84 (114)
125 1x4b_A Heterogeneous nuclear r 25.5 92 0.0031 17.2 4.4 49 35-87 31-88 (116)
126 3v4m_A Splicing factor U2AF 65 25.3 93 0.0032 17.1 5.7 48 48-95 28-87 (105)
127 2fy1_A RNA-binding motif prote 25.3 96 0.0033 17.3 5.2 49 35-87 11-67 (116)
128 1oo0_B CG8781-PA, drosophila Y 25.0 91 0.0031 16.9 6.2 48 35-86 30-86 (110)
129 3zzy_A Polypyrimidine tract-bi 24.8 1.1E+02 0.0038 17.9 4.3 48 35-86 32-84 (130)
130 1wf0_A TDP-43, TAR DNA-binding 24.4 83 0.0028 16.3 4.7 46 35-84 9-58 (88)
131 1rk8_A CG8781-PA, CG8781-PA pr 24.0 1.2E+02 0.0042 18.1 5.7 48 35-86 76-132 (165)
132 2dnz_A Probable RNA-binding pr 23.9 87 0.003 16.4 7.4 49 34-86 8-65 (95)
133 2d9o_A DNAJ (HSP40) homolog, s 23.8 1E+02 0.0034 17.0 6.2 39 49-87 31-73 (100)
134 2rs2_A Musashi-1, RNA-binding 23.1 1E+02 0.0035 16.9 5.6 49 35-87 29-86 (109)
135 1p27_B RNA-binding protein 8A; 23.0 98 0.0034 16.6 6.2 48 35-86 27-83 (106)
136 2cq3_A RNA-binding protein 9; 22.8 98 0.0034 16.5 5.4 49 34-86 18-73 (103)
137 3tyt_A Heterogeneous nuclear r 22.8 1.5E+02 0.0051 18.6 6.1 49 34-86 7-60 (205)
138 1whw_A Hypothetical protein ri 22.8 96 0.0033 16.4 6.1 48 35-86 12-68 (99)
139 1x4d_A Matrin 3; structural ge 22.0 1.1E+02 0.0038 16.9 6.2 52 32-86 16-70 (102)
140 2ywk_A Putative RNA-binding pr 22.0 97 0.0033 16.2 4.0 48 35-86 20-75 (95)
141 2cjk_A Nuclear polyadenylated 21.7 1.3E+02 0.0044 17.5 4.6 41 48-88 100-149 (167)
142 4f02_A Polyadenylate-binding p 21.6 1.6E+02 0.0053 18.4 5.1 50 34-87 18-76 (213)
143 2cqi_A Nucleolysin TIAR; RNA r 21.4 1.1E+02 0.0036 16.4 5.4 49 34-86 18-73 (103)
144 1x4f_A Matrin 3; structural ge 21.3 87 0.003 17.7 2.8 51 33-86 27-80 (112)
145 3n9u_C Cleavage and polyadenyl 21.3 1.4E+02 0.0048 17.8 4.8 40 48-87 68-118 (156)
146 2cph_A RNA binding motif prote 21.2 1.1E+02 0.0037 16.4 7.3 50 34-87 18-77 (107)
147 1wex_A Hypothetical protein (r 21.2 1.2E+02 0.0039 16.7 4.7 50 33-86 17-69 (104)
148 2dit_A HIV TAT specific factor 21.1 1.2E+02 0.004 16.7 4.3 38 49-86 40-82 (112)
149 1x4g_A Nucleolysin TIAR; struc 21.1 1.1E+02 0.0039 16.6 6.2 48 35-86 29-79 (109)
150 2dgo_A Cytotoxic granule-assoc 21.0 1.2E+02 0.0039 16.7 5.4 49 35-87 19-76 (115)
151 2cqc_A Arginine/serine-rich sp 21.0 1E+02 0.0035 16.0 5.9 49 34-86 18-75 (95)
152 2dgv_A HnRNP M, heterogeneous 20.8 1E+02 0.0035 16.0 4.4 48 35-86 12-66 (92)
153 1x5u_A Splicing factor 3B subu 20.8 1.1E+02 0.0038 16.4 6.9 50 34-87 18-76 (105)
154 2dgu_A Heterogeneous nuclear r 20.6 1.1E+02 0.0038 16.4 6.0 49 34-86 14-63 (103)
155 2cpj_A Non-POU domain-containi 20.2 1.1E+02 0.0038 16.2 3.0 49 34-86 18-69 (99)
156 1wg5_A Heterogeneous nuclear r 20.1 1.2E+02 0.004 16.4 6.2 57 35-95 19-84 (104)
No 1
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=99.88 E-value=9.7e-23 Score=148.64 Aligned_cols=124 Identities=23% Similarity=0.399 Sum_probs=97.5
Q ss_pred CCCCCCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchhh
Q 043622 21 KIKNLPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRILL 100 (148)
Q Consensus 21 ~~~~~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~ 100 (148)
+..+.||||+ ++|++||++.+...+..+..+.+|+++||+++++++|+.++++++||+++++++.+++..|.+++....
T Consensus 5 ~~~~~PPgP~-~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~ 83 (494)
T 3swz_A 5 TGAKYPKSLL-SLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT 83 (494)
T ss_dssp -------CCB-CCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred CCCCCCCCCC-CCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence 3456899999 999999999875124678899999999999999999999999999999999999998889988887655
Q ss_pred hhhhccCCCceEeCCCCchHHHHHhhhhhhcCCh--hhHhhhhhhhhhc
Q 043622 101 GEHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSN--TSLQTLSCYIRKD 147 (148)
Q Consensus 101 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~--~~l~~~~~~~~~~ 147 (148)
....+..+.|++++++|+.|+++||++++ .|+. ..++.+.+ ++++
T Consensus 84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~~~~-~f~~~~~~~~~~~~-~i~~ 130 (494)
T 3swz_A 84 LDIASNNRKGIAFADSGAHWQLHRRLAMA-TFALFKDGDQKLEK-IICQ 130 (494)
T ss_dssp HHHHTTTTCSSSSSCSSHHHHHHHHHHHH-HTTTTSSSTTCHHH-HHHH
T ss_pred HHHhccCCCCeEeCCCCHHHHHHHHHHHH-HHHHhcchHHHHHH-HHHH
Confidence 55555545788777779999999999999 7874 44666666 5543
No 2
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=99.87 E-value=7.8e-23 Score=148.36 Aligned_cols=117 Identities=27% Similarity=0.472 Sum_probs=94.8
Q ss_pred hcCCCCCCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCch
Q 043622 19 NNKIKNLPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRI 98 (148)
Q Consensus 19 ~~~~~~~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~ 98 (148)
.+++.++||||+ ++|++||++++. ..+.+..+.+|+++||+|+++++|+.++|+++||+++++|+.+++..|..++..
T Consensus 5 ~ss~~kLPPGP~-~lP~iGn~~~~~-~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~ 82 (479)
T 3tbg_A 5 TSSKGKLPPGPL-PLPGLGNLLHVD-FQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPV 82 (479)
T ss_dssp ----CCCCCCSC-CBTTTBTGGGCC-TTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCC
T ss_pred CCCCCCCCCCCC-CcCcccchHhhc-CCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCch
Confidence 344557999999 999999999886 678889999999999999999999999999999999999999888888887766
Q ss_pred hhhhhhcc--CCCceEeCCCCchHHHHHhhhhhhcCChhhHh
Q 043622 99 LLGEHLGY--NSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQ 138 (148)
Q Consensus 99 ~~~~~~~~--~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~ 138 (148)
........ .+.+++++.+|+.|+++|+++.+ .|+...+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~-~~~~~~~~ 123 (479)
T 3tbg_A 83 PITQILGFGPRSQGVFLARYGPAWREQRRFSVS-TLRNLGLG 123 (479)
T ss_dssp GGGGGGTCBTTBCCSTTCCSSHHHHHHHHHHHH-HHHHTTST
T ss_pred HHHHHhccCCCCCceeeCCCCHHHHHHHHHHHH-Hhcchhhh
Confidence 55444332 22456666669999999999999 67665543
No 3
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=99.86 E-value=2.6e-22 Score=146.54 Aligned_cols=122 Identities=13% Similarity=0.181 Sum_probs=94.2
Q ss_pred CCCCCCCCCCCCCceeeecchhcc--cCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCch
Q 043622 21 KIKNLPPNPFPALPIVGHLYLIFK--NKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRI 98 (148)
Q Consensus 21 ~~~~~ppgp~~~~p~~G~~~~~~~--~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~ 98 (148)
.+.+.||||+ ++|++||++.+.. ....+..+.+|+++||+++++++++.++++++||+++++++.++ .|..++..
T Consensus 42 ~~~~~pPGP~-~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r~~~ 118 (503)
T 3s79_A 42 EGTSSIPGPG-YCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHN--HYSSRFGS 118 (503)
T ss_dssp ---CCCCSCC-CCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSG--GGCCCCCC
T ss_pred hccCCCCCCC-CCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcC--CCCCcchh
Confidence 3456889999 9999999988740 12355688999999999999999999999999999999999643 46666543
Q ss_pred hh-hhhhccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 99 LL-GEHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 99 ~~-~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
.. ....+..+.|++++.+|+.|+++|+++++ +|+...++++.+ .+++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~-~f~~~~l~~~~~-~~~~ 166 (503)
T 3s79_A 119 KLGLQCIGMHEKGIIFNNNPELWKTTRPFFMK-ALSGPGLVRMVT-VCAE 166 (503)
T ss_dssp HHHHHHHTCTTSSSTTCCCHHHHHHHHHHHHH-HTSTHHHHHHHH-HHHH
T ss_pred hhhhhhhccCCCceeeCCCccHHHHHHHhhhH-hhChHHHHHHHH-HHHH
Confidence 22 22333334676666669999999999999 899999999988 6643
No 4
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=99.86 E-value=2.3e-22 Score=146.21 Aligned_cols=114 Identities=22% Similarity=0.337 Sum_probs=95.9
Q ss_pred CCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhC-CCCCCCCCchhhhhh
Q 043622 25 LPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKS-DVVFANRPRILLGEH 103 (148)
Q Consensus 25 ~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~-~~~~~~~~~~~~~~~ 103 (148)
.+|||+ ++|++||+..+ ....+..+.+|+++||+++++++++.++|+++||+++++|+.++ ...|..++.......
T Consensus 15 ~~PGP~-~~PliGn~~~~--~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~~ 91 (485)
T 3nxu_A 15 GIPGPT-PLPFLGNILSY--HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF 91 (485)
T ss_dssp TCCCCC-CBTTTBTGGGG--GGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCGG
T ss_pred CCCCCC-CcCeecCcHHh--hcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccccccc
Confidence 467999 99999999998 56788899999999999999999999999999999999999876 566766654433222
Q ss_pred hccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 104 LGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 104 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
. +.++++++ |+.|+++|+++++ +|+.++++++.+ .+++
T Consensus 92 ~---~~~l~~~~-g~~w~~~R~~~~~-~fs~~~l~~~~~-~i~~ 129 (485)
T 3nxu_A 92 M---KSAISIAE-DEEWKRLRSLLSP-TFTSGKLKEMVP-IIAQ 129 (485)
T ss_dssp G---GGSTTTCC-HHHHHHHHHHHGG-GGCHHHHHHHHH-HHHH
T ss_pred c---ccCccccC-CcHHHHHHhhcCh-hcCHHHHHHHHH-HHHH
Confidence 2 25667677 9999999999999 899999999998 7754
No 5
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=99.85 E-value=7e-22 Score=144.06 Aligned_cols=118 Identities=24% Similarity=0.335 Sum_probs=91.8
Q ss_pred cCCCCCCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchh
Q 043622 20 NKIKNLPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRIL 99 (148)
Q Consensus 20 ~~~~~~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~ 99 (148)
.+..+.||||+ + ++++. .++.+..+.+|+++||+++++++++.++++++||+++++|+.++...|.+++...
T Consensus 25 ~~~~~lPPGP~-~------l~~~~-~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~ 96 (496)
T 3qz1_A 25 LRNLHLPPLVP-G------FLHLL-QPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIP 96 (496)
T ss_dssp ----CCCCBCS-C------SCTTS-SSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCT
T ss_pred ccCCCCCcCCc-c------ccccC-CCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcc
Confidence 35568899999 5 45554 6788999999999999999999999999999999999999998888888777654
Q ss_pred hhhhhccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 100 LGEHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 100 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
.......+..+++++++|+.|+++||++++ .|+.+.++.+.+ ++++
T Consensus 97 ~~~~~~~~~~~l~~~~~g~~w~~~Rr~~~~-~f~~~~~~~~~~-~i~~ 142 (496)
T 3qz1_A 97 SYKLVSQRCQDISLGDYSLLWKAHKKLTRS-ALLLGTRSSMEP-WVDQ 142 (496)
T ss_dssp TTTTSCTTCCCSSSSCCSHHHHHHHHHHHH-HHHC--CCCHHH-HHHH
T ss_pred hHHHhcCCCCceEECCCCHHHHHHHHHHHH-HHhhccHhhHHH-HHHH
Confidence 333333332478877779999999999999 798777777888 6654
No 6
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=99.84 E-value=2e-21 Score=141.04 Aligned_cols=129 Identities=23% Similarity=0.347 Sum_probs=98.5
Q ss_pred HHHhhcCCCCCCCCCCCCCceeeecchhc-c--cCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCC
Q 043622 15 ATHLNNKIKNLPPNPFPALPIVGHLYLIF-K--NKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVV 91 (148)
Q Consensus 15 ~~~~~~~~~~~ppgp~~~~p~~G~~~~~~-~--~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~ 91 (148)
+.....++.+.+|||+ ++|++||++.+. . .++.+..+.+|+++||+++++++|+.+.|+++||+++++|+.++ ..
T Consensus 15 ~~~~~~~pl~~~PGP~-~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~ 92 (482)
T 3k9v_A 15 MTDGETRNVTDLPGPT-NWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SA 92 (482)
T ss_dssp ----CCEEGGGCCCSC-CCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CS
T ss_pred ccccccCCCCCCCCCC-CCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CC
Confidence 3434455666778999 999999998874 1 24678899999999999999999999999999999999999874 56
Q ss_pred CCCCCchhh---hhhhccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 92 FANRPRILL---GEHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 92 ~~~~~~~~~---~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
|.+++.... .......+.|+++++ |+.|+++||++++.+++.+.++.+.+ .+++
T Consensus 93 ~~~r~~~~~~~~~~~~~~~~~~l~~~~-g~~w~~~Rr~~~~~f~~~~~~~~~~~-~i~~ 149 (482)
T 3k9v_A 93 HPQRLEIKPWKAYRDHRNEAYGLMILE-GQEWQRVRSAFQKKLMKPVEIMKLDK-KINE 149 (482)
T ss_dssp SCCCCCCHHHHHHHHHHTCCCCTTTCC-HHHHHHHHHHHHHHHTCHHHHGGGHH-HHHH
T ss_pred CCCCCCchHHHHHHHhcCCCCCceeCC-CchHHHHHHHhhHHhcChHHHHHHHH-HHHH
Confidence 777764321 111222346888777 99999999999994348888998988 7654
No 7
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=99.83 E-value=3.3e-21 Score=140.78 Aligned_cols=111 Identities=23% Similarity=0.530 Sum_probs=72.8
Q ss_pred cCCCCCCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchh
Q 043622 20 NKIKNLPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRIL 99 (148)
Q Consensus 20 ~~~~~~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~ 99 (148)
.+..+.||||+ ++|++||+..+ ..+.+..+.+|+++||+++++++++.++++++||+++++|+.++...|.+++...
T Consensus 5 ~~~~~~pPgP~-~~P~iG~~~~~--~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~ 81 (507)
T 3pm0_A 5 TSSKGKPPGPF-AWPLIGNAAAV--GQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFA 81 (507)
T ss_dssp --------------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCH
T ss_pred cCCCCCCcCCC-CCCeeCchhhc--CccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcch
Confidence 34556889999 99999999988 5778999999999999999999999999999999999999988888888777654
Q ss_pred hhhhhccCCCceEeCCCCchHHHHHhhhhhhcCChh
Q 043622 100 LGEHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNT 135 (148)
Q Consensus 100 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~ 135 (148)
...... .+.+++++.+|+.|+++|+++++ .|+..
T Consensus 82 ~~~~~~-~g~~l~~~~~g~~w~~~R~~~~~-~~~~~ 115 (507)
T 3pm0_A 82 SFRVVS-GGRSMAFGHYSEHWKVQRRAAHS-MMRNF 115 (507)
T ss_dssp HHHHGG-GGTCSSSSCSSHHHHHHHHHHHH-HHHHS
T ss_pred HHHhhc-CCCceEECCCChHHHHHHHHHHH-HHHHh
Confidence 433333 23677666669999999999998 66543
No 8
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=99.83 E-value=3.7e-21 Score=139.38 Aligned_cols=119 Identities=15% Similarity=0.207 Sum_probs=97.3
Q ss_pred CCCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchhhhhh
Q 043622 24 NLPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRILLGEH 103 (148)
Q Consensus 24 ~~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~ 103 (148)
+.||+|+.++|++||++.+ ..+.+.++.+++++||+|+++++++.++++++||+.+++++.++...|..++.......
T Consensus 11 ~~PP~~~~~lP~iG~~~~~--~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~ 88 (461)
T 3ld6_A 11 KSPPYIFSPIPFLGHAIAF--GKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTT 88 (461)
T ss_dssp CCCCBCCCSSTTTBTHHHH--HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHH
T ss_pred CCCCCCCCCcCeeeeHHHh--hhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhh
Confidence 4677776348999999998 57789999999999999999999999999999999999999988877776655432222
Q ss_pred hccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 104 LGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 104 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
...+ .+++++.+|+.|+++|+++.+ +|+.+.++++.+ ++++
T Consensus 89 ~~~g-~~~~~~~~~~~~~~~R~~~~~-~f~~~~l~~~~~-~i~~ 129 (461)
T 3ld6_A 89 PVFG-KGVAYDVPNPVFLEQKKMLKS-GLNIAHFKQHVS-IIEK 129 (461)
T ss_dssp HHHC-TTSGGGSCHHHHHHHHHHHHH-HSSHHHHHHHHH-HHHH
T ss_pred ccCC-CccccCCCcHHHHHHHHhccc-cccHHHHhhhhH-HHHH
Confidence 1122 566555559999999999999 899999999998 7754
No 9
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=99.82 E-value=2.2e-20 Score=135.52 Aligned_cols=110 Identities=25% Similarity=0.560 Sum_probs=89.6
Q ss_pred cCCCCCCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchh
Q 043622 20 NKIKNLPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRIL 99 (148)
Q Consensus 20 ~~~~~~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~ 99 (148)
+++.+.||||+ ++|++||+..+. ..+.+..+.+|+++||+++++++++.++++++||+++++|+.++...|.+++...
T Consensus 6 ~~~~~lpPgP~-~~PliG~~~~~~-~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~ 83 (476)
T 3e6i_A 6 SSKGKLPPGPF-PLPIIGNLFQLE-LKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLP 83 (476)
T ss_dssp ----CCCCCCC-CBTTTBTGGGCC-TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCG
T ss_pred cCCCCCCcCCC-CcccccChhhhc-cccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCc
Confidence 34567899999 999999999885 6778899999999999999999999999999999999999998877888776554
Q ss_pred hhhhhccCCCceEeCCCCchHHHHHhhhhhhcCChh
Q 043622 100 LGEHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNT 135 (148)
Q Consensus 100 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~ 135 (148)
...... + .|+++++ |+.|+++|+++.+ .|+..
T Consensus 84 ~~~~~~-~-~~l~~~~-g~~w~~~Rr~~~~-~l~~~ 115 (476)
T 3e6i_A 84 AFHAHR-D-RGIIFNN-GPTWKDIRRFSLT-TLRNY 115 (476)
T ss_dssp GGGGGT-T-SSSTTCC-STTHHHHHHHHHH-HHHHT
T ss_pred hhheec-C-CCEEecC-CcHHHHHHHHHHH-HHHhc
Confidence 333332 2 3777777 9999999999888 67643
No 10
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=99.81 E-value=1.3e-20 Score=135.71 Aligned_cols=119 Identities=17% Similarity=0.227 Sum_probs=98.4
Q ss_pred CCCCCCCCCCCceeeecchhcccCchHHHHHHHHhhcC-CeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchhhh
Q 043622 23 KNLPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHG-PILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRILLG 101 (148)
Q Consensus 23 ~~~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg-~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~ 101 (148)
.+.||||+.++|++||+..+ ..+.+..+.+++++|| +++++++++.++++++||+++++++.++...|.+++.....
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~--~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~ 79 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQF--GKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFM 79 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHH--HHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGG
T ss_pred CCCCCCCCCCcchhccHHHH--ccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHH
Confidence 46789976359999999988 5678889999999999 99999999999999999999999998877777777655433
Q ss_pred hhhccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 102 EHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 102 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
.... +.|++++.+|+.|+++|+++++ .|+.+.++++.+ .+++
T Consensus 80 ~~~~--g~~~~~~~~~~~~~~~R~~~~~-~f~~~~l~~~~~-~i~~ 121 (450)
T 3gw9_A 80 VPVF--GEGVAYAAPYPRMREQLNFLAE-ELTIAKFQNFVP-AIQH 121 (450)
T ss_dssp HHHH--CTTSGGGSCHHHHHHHHHHHHH-TTSGGGCTTHHH-HHHH
T ss_pred HHHh--cCCcccCCCcHHHHHHHHHHHH-HHhHHHHHHHHH-HHHH
Confidence 2222 2566655459999999999999 899999999998 7754
No 11
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=99.81 E-value=1.8e-20 Score=135.67 Aligned_cols=120 Identities=15% Similarity=0.172 Sum_probs=96.7
Q ss_pred CCCCCCCC-CCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchh
Q 043622 21 KIKNLPPN-PFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRIL 99 (148)
Q Consensus 21 ~~~~~ppg-p~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~ 99 (148)
+..+.||| |+ ++|++||++.+ ..+.+..+.+++++||+++++++++.+.+++++|+.+++++.++...+..+....
T Consensus 8 ~~~~~PPg~P~-~lP~iG~l~~~--~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~ 84 (461)
T 3i3k_A 8 AGVKSPPYIFS-PIPFLGHAIAF--GKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYS 84 (461)
T ss_dssp --CCCCCBCCC-SSTTTBTHHHH--HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHH
T ss_pred CCCCCCCCCCC-CCCccccHHhh--ccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHH
Confidence 45578999 88 99999999988 5678889999999999999999999999999999999999987766665443322
Q ss_pred -hhhhhccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 100 -LGEHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 100 -~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
...... +.|+++..+|+.|+++|+++.+ .|+.+.++++.+ ++++
T Consensus 85 ~~~~~~~--g~g~~~~~~g~~w~~~Rr~~~~-~f~~~~l~~~~~-~~~~ 129 (461)
T 3i3k_A 85 RLTTPVF--GKGVAYDVPNPVFLEQKKMLKS-GLNIAHFKQHVS-IIEK 129 (461)
T ss_dssp HHHHHHH--CTTSGGGSCHHHHHHHHHHHHH-HSSHHHHHHHHH-HHHH
T ss_pred Hhhhhhc--CCeeeeCCCcHHHHHHHHHHhh-hhCHHHHHHHHH-HHHH
Confidence 111121 2566666559999999999999 899999999998 7764
No 12
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=99.80 E-value=5.9e-20 Score=133.54 Aligned_cols=119 Identities=24% Similarity=0.474 Sum_probs=94.6
Q ss_pred CCCCCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchhhh
Q 043622 22 IKNLPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRILLG 101 (148)
Q Consensus 22 ~~~~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~ 101 (148)
..+.||||+ ++|++|++..+. .++.+..+.+++++||+++++++++.+.++++||+.+++|+.++...|.+++.....
T Consensus 8 ~~~~pPgP~-~~p~iG~~~~~~-~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~ 85 (476)
T 1po5_A 8 KGKLPPGPS-PLPVLGNLLQMD-RKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVV 85 (476)
T ss_dssp -CCCCCCSC-CBTTTBTGGGCC-TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGG
T ss_pred CCCCCcCCC-CCCccccHHhcc-CCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHH
Confidence 346889999 999999998874 577889999999999999999999989999999999999998776678765543222
Q ss_pred hhhccCCCceEeCCCCchHHHHHhhhhhhcCChh--hHhhhhhhhhh
Q 043622 102 EHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNT--SLQTLSCYIRK 146 (148)
Q Consensus 102 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~--~l~~~~~~~~~ 146 (148)
.... .+.++++++ |+.|+++|+++.+ .|+.. .++.+.+ .++
T Consensus 86 ~~~~-~~~~l~~~~-g~~w~~~Rr~~~~-~f~~~~~~~~~~~~-~i~ 128 (476)
T 1po5_A 86 DPIF-QGYGVIFAN-GERWRALRRFSLA-TMRDFGMGKRSVEE-RIQ 128 (476)
T ss_dssp CSCC-SSCCCCCSS-HHHHHHHHHHHHH-HHHHSCCCHHHHHH-HHH
T ss_pred Hhhc-CCCceEecC-CcHHHHHHHHHHH-HHHHhCCChhHHHH-HHH
Confidence 2222 236788776 9999999999999 78876 4566666 554
No 13
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=99.80 E-value=6e-20 Score=133.49 Aligned_cols=119 Identities=24% Similarity=0.424 Sum_probs=95.8
Q ss_pred CCCCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchhhhh
Q 043622 23 KNLPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRILLGE 102 (148)
Q Consensus 23 ~~~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~ 102 (148)
.+.||||+ ++|++||+..+. ..+.+..+.+++++||+++++++++.++++++||+.+++|+.++...|.+++......
T Consensus 9 ~~~pPgP~-~~p~iG~~~~~~-~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~ 86 (476)
T 2fdv_A 9 GKLPPGPT-PLPFIGNYLQLN-TEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFD 86 (476)
T ss_dssp CBCCCCCC-CBTTTBTGGGCC-TTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHH
T ss_pred CCCCCCCC-CCcccccHhhcC-CcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHh
Confidence 36789999 999999998874 5778899999999999999999999999999999999999977666777655433222
Q ss_pred hhccCCCceEeCCCCchHHHHHhhhhhhcCChhhH--hhhhhhhhhc
Q 043622 103 HLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSL--QTLSCYIRKD 147 (148)
Q Consensus 103 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~~ 147 (148)
.... +.++++++ |+.|+++|+++.+ .|+...+ +.+.+ .+++
T Consensus 87 ~~~~-~~~l~~~~-g~~~~~~Rr~~~~-~f~~~~~~~~~~~~-~i~~ 129 (476)
T 2fdv_A 87 WVFK-GYGVVFSN-GERAKQLRRFSIA-TLRDFGVGKRGIEE-RIQE 129 (476)
T ss_dssp HHHT-TCSSSSCC-HHHHHHHHHHHHH-HHHHTTTTSHHHHH-HHHH
T ss_pred hhcC-CCCeEecC-chHHHHHHHHHHH-HHHHhCCChhhHHH-HHHH
Confidence 2222 36778777 9999999999999 8987766 67777 6543
No 14
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=99.79 E-value=1e-19 Score=132.87 Aligned_cols=108 Identities=28% Similarity=0.544 Sum_probs=86.0
Q ss_pred CCCCCC--CCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCch
Q 043622 21 KIKNLP--PNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRI 98 (148)
Q Consensus 21 ~~~~~p--pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~ 98 (148)
...++| |||+ ++|++|++..+ .++.+..+.+++++||+++++++++.++++++||+++++|+.++...|.+++..
T Consensus 11 ~~~~lp~~PgP~-~~p~~G~~~~~--~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~ 87 (495)
T 2hi4_A 11 VPKGLKSPPEPW-GWPLLGHVLTL--GKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDL 87 (495)
T ss_dssp CCTTCBCCCCCC-CBTTTBTHHHH--TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCC
T ss_pred CCCCCCCCCCCC-CCcceeeHHhc--CccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCc
Confidence 334444 8999 99999999887 567888999999999999999999999999999999999998776678766644
Q ss_pred hhhhhhccCCCceEeC-CCCchHHHHHhhhhhhcCC
Q 043622 99 LLGEHLGYNSTSLVWS-PYGSHWRNLRKLLSHDILS 133 (148)
Q Consensus 99 ~~~~~~~~~~~~~~~~-~~g~~w~~~R~~~~~~~f~ 133 (148)
....... .+.+++++ ++|+.|+++|+++++ .|+
T Consensus 88 ~~~~~~~-~~~~l~~~~~~g~~w~~~Rr~~~~-~f~ 121 (495)
T 2hi4_A 88 YTSTLIT-DGQSLTFSTDSGPVWAARRRLAQN-ALN 121 (495)
T ss_dssp HHHHTST-TSCCTTTSSCCSHHHHHHHHHHHH-HHH
T ss_pred HHHHHhc-CCCCEEEcCCCChHHHHHHHHHHH-HHH
Confidence 3222222 23677776 349999999999999 654
No 15
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=99.79 E-value=1e-19 Score=132.53 Aligned_cols=121 Identities=25% Similarity=0.442 Sum_probs=92.0
Q ss_pred CCCCCCCCCCCCCceeeecchhcccCc--hHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCch
Q 043622 21 KIKNLPPNPFPALPIVGHLYLIFKNKP--LHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRI 98 (148)
Q Consensus 21 ~~~~~ppgp~~~~p~~G~~~~~~~~~~--~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~ 98 (148)
+..++||||+ ++|++|++..+. ... .+..+.+++++||+++++++++.++++++||+.+++|+.+++..|.+++..
T Consensus 9 ~~~~lpPgP~-~~p~~G~~~~~~-~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~ 86 (481)
T 3czh_A 9 RPMGFPPGPP-GLPFIGNIYSLA-ASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCL 86 (481)
T ss_dssp ---CCCCCCC-CBTTTBHHHHHH-HCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCC
T ss_pred CCCCCCCCCC-CCcccccHhhcC-cccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCc
Confidence 4567899999 999999998875 333 788999999999999999999999999999999999998877778777644
Q ss_pred hhhhhhccCCCceEeCCCCchHHHHHhhhhhhcCChhhH--hhhhhhhhh
Q 043622 99 LLGEHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSL--QTLSCYIRK 146 (148)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~ 146 (148)
.....+.. +.|++++.+|+.|+++|+++++ .|+...+ +.+.+ .++
T Consensus 87 ~~~~~~~~-~~~~~~~~~g~~w~~~R~~~~~-~f~~~~~~~~~~~~-~i~ 133 (481)
T 3czh_A 87 PLFMKMTK-MGGLLNSRYGRGWVDHRRLAVN-SFRYFGYGQKSFES-KIL 133 (481)
T ss_dssp HHHHHHHT-TCSSTTCCSSHHHHHHHHHHHH-HHHHTTTTSTTHHH-HHH
T ss_pred HHHHhhcC-CCCeEeCCCChHHHHHHHHHHH-HHHHhcCChHHHHH-HHH
Confidence 33333322 2465544449999999999999 7876543 45655 543
No 16
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=99.78 E-value=8e-20 Score=132.80 Aligned_cols=117 Identities=26% Similarity=0.492 Sum_probs=86.8
Q ss_pred CCCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchhhhhh
Q 043622 24 NLPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRILLGEH 103 (148)
Q Consensus 24 ~~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~ 103 (148)
+.||||+ ++|++|++..+. ..+.+..+.+++++||+++++++++.+.++++||+.+++|+.++...|.+++.......
T Consensus 11 ~~pPgP~-~~p~iG~~~~~~-~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~ 88 (477)
T 1r9o_A 11 KLPPGPT-PLPVIGNILQIG-IKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAER 88 (477)
T ss_dssp BCCCCSS-SCC-----CCBC-HHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCT
T ss_pred CCCCCCC-CCceeccHhhcC-CCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhh
Confidence 5789999 999999998874 46678899999999999999999988999999999999999776667776543321222
Q ss_pred hccCCCceEeCCCCchHHHHHhhhhhhcCChh--hHhhhhhhhhh
Q 043622 104 LGYNSTSLVWSPYGSHWRNLRKLLSHDILSNT--SLQTLSCYIRK 146 (148)
Q Consensus 104 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~--~l~~~~~~~~~ 146 (148)
.. .+.++++++ |+.|+++||++.+ .|+.. .++.+.+ .++
T Consensus 89 ~~-~~~~l~~~~-g~~w~~~Rr~~~~-~~~~~~~~~~~~~~-~i~ 129 (477)
T 1r9o_A 89 AN-RGFGIVFSN-GKKWKEIRRFSLM-TLRNFGMGKRSIED-RVQ 129 (477)
T ss_dssp TT-CTTSSTTCC-HHHHHHHHHHHHH-HHTTSSSCSSCHHH-HHH
T ss_pred cc-CCCceEecC-ChHHHHHHHHHHH-HHHHhCCChHHHHH-HHH
Confidence 21 235777776 9999999999999 78876 3455666 543
No 17
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=99.77 E-value=2.2e-19 Score=129.67 Aligned_cols=120 Identities=23% Similarity=0.253 Sum_probs=93.2
Q ss_pred hcCCCCCCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCch
Q 043622 19 NNKIKNLPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRI 98 (148)
Q Consensus 19 ~~~~~~~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~ 98 (148)
+.++.+.||||+ ++|++|++..+. .+.. .+.+++++||+++++++++.+.++++||+.+++|+.++...|..+...
T Consensus 7 ~~~~~~~pPgp~-~~P~iG~~~~~~--~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~ 82 (444)
T 2ve3_A 7 NLNSLPIPPGDF-GLPWLGETLNFL--NDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPL 82 (444)
T ss_dssp --CCCCCCCCCC-CBTTTBTHHHHH--HCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECCH
T ss_pred CCCCCCCCCCCC-CCCccccHHHHh--cCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchhH
Confidence 345567889999 999999998874 3345 788999999999999988888999999999999998765556532221
Q ss_pred hhhhhhccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 99 LLGEHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
......+ ..++++.+ |+.|+++|+++++ +|+++.++++.+ .+++
T Consensus 83 ~~~~~~g--~~~l~~~~-g~~~~~~R~~~~~-~f~~~~l~~~~~-~i~~ 126 (444)
T 2ve3_A 83 STRILLG--PNALATQM-GEIHRSRRKILYQ-AFLPRTLDSYLP-KMDG 126 (444)
T ss_dssp HHHHHHC--TTSGGGCC-HHHHHHHHHHHHG-GGCHHHHHTTHH-HHHH
T ss_pred HHHHHhC--ccccccCC-chHHHHHHHHHHh-hcCHHHHHHHHH-HHHH
Confidence 1222222 23677766 9999999999999 899999999998 7754
No 18
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=99.76 E-value=9.7e-19 Score=127.11 Aligned_cols=118 Identities=18% Similarity=0.231 Sum_probs=91.3
Q ss_pred CCCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchhhhhh
Q 043622 24 NLPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRILLGEH 103 (148)
Q Consensus 24 ~~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~ 103 (148)
+.+|||+ ++|++||++++. .+..+..+.+++++||+++++++++.+.++++||+++++|+.+. .|.+.........
T Consensus 3 ~~~PGP~-~~p~iG~l~~~~-~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~~~~~~~ 78 (470)
T 2ij2_A 3 KEMPQPK-TFGELKNLPLLN-TDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLSQALKFV 78 (470)
T ss_dssp CCCCCCC-CCGGGTTGGGGC-SSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCCHHHHHH
T ss_pred CCCCCCC-CCCccccHHHHh-cccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCchhHHHHH
Confidence 3568999 999999999885 56788889999999999999999999999999999999999642 3433222111111
Q ss_pred hccCCCceEeC-CCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 104 LGYNSTSLVWS-PYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 104 ~~~~~~~~~~~-~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
....+.+++++ .+|+.|+++||++++ +|+.+.++++.+ .+++
T Consensus 79 ~~~~~~~l~~~~~~g~~w~~~Rr~~~~-~fs~~~l~~~~~-~i~~ 121 (470)
T 2ij2_A 79 RDFAGDGLFTSWTHEKNWKKAHNILLP-SFSQQAMKGYHA-MMVD 121 (470)
T ss_dssp HHHHTTSGGGSCTTSHHHHHHHHHHGG-GGSTTTHHHHHH-HHHH
T ss_pred HHhcCCceEEcCCCchHHHHHHHHhcc-ccCHHHHHHHHH-HHHH
Confidence 11113577766 349999999999999 899999999998 7654
No 19
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=99.76 E-value=1.1e-18 Score=127.04 Aligned_cols=122 Identities=17% Similarity=0.208 Sum_probs=94.1
Q ss_pred CCCCCCCCCCCCCceeeecchhc---ccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCc
Q 043622 21 KIKNLPPNPFPALPIVGHLYLIF---KNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPR 97 (148)
Q Consensus 21 ~~~~~ppgp~~~~p~~G~~~~~~---~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~ 97 (148)
++.+.+|||+ ..++. +++.+. .....+..+.+|+++||+++++++|+.+.|+++||+++++|+.++. .|.+++.
T Consensus 6 ~pL~~~PGP~-~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~r~~ 82 (487)
T 3n9y_A 6 RPFNEIPSPG-DNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEG-PNPERFL 82 (487)
T ss_dssp BCGGGSCCSC-SCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCC-SSCCCCC
T ss_pred CCHhhCCCCC-CCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCCCCC
Confidence 4455678999 66654 666654 1236788999999999999999999999999999999999997654 6777765
Q ss_pred hhhh---hhhccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 98 ILLG---EHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 98 ~~~~---~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
.... ......+.++++++ |+.|+++|+++++.+|+.+.++++.+ ++++
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~-g~~w~~~Rr~l~~~~fs~~~l~~~~~-~i~~ 133 (487)
T 3n9y_A 83 IPPWVAYHQYYQRPIGVLLKK-SAAWKKDRVALNQEVMAPEATKNFLP-LLDA 133 (487)
T ss_dssp CHHHHHHHHHTTCCCCGGGCC-HHHHHHHHHHHHHHHTSHHHHTTHHH-HHHH
T ss_pred CcHHHHHHHHccccCCCccCC-cHHHHHHHHhcCcccCCchHHHHhhh-HHHH
Confidence 4321 11222346777777 99999999999994499999999998 7754
No 20
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=99.75 E-value=1.3e-19 Score=132.11 Aligned_cols=121 Identities=15% Similarity=0.194 Sum_probs=94.7
Q ss_pred hcCCCCCCCCCCCC-CceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCC-CCCCCC
Q 043622 19 NNKIKNLPPNPFPA-LPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDV-VFANRP 96 (148)
Q Consensus 19 ~~~~~~~ppgp~~~-~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~-~~~~~~ 96 (148)
.+...+.||||+ + +|++||++.+ ..+++..+.+++++||+++++++++.+++++++|+++++++.++.. .+..++
T Consensus 8 ~~~~~~~PPgp~-~~lPliG~~~~~--~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~ 84 (491)
T 3v8d_A 8 RRRQTGEPPLEN-GLIPYLGCALQF--GANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFH 84 (491)
T ss_dssp CCCCTTSCCEEE-EEESSTTTTGGG--TCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHH
T ss_pred hccCCCCCCCCC-CCcceeccHHHH--hcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHH
Confidence 345567899999 7 6999999998 6889999999999999999999999999999999999999976541 232222
Q ss_pred chhhhhhhccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 97 RILLGEHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
.......++ .+.+...+|+.|+++|+.+.+ +|+++.++.+.+ .+.+
T Consensus 85 ~~~~~~~~g---~~~~~~~~g~~~~~~Rr~~~~-~f~~~~l~~~~~-~i~~ 130 (491)
T 3v8d_A 85 FALSAKAFG---HRSIDPMDGNTTENINDTFIK-TLQGHALNSLTE-SMME 130 (491)
T ss_dssp HHHHHHHHT---CCCCCGGGSSBCCCHHHHHHH-HHSHHHHHHHHH-HHHH
T ss_pred HHHHHHhcC---CcccccccchhHHHHHHHHHH-HcCccchHHHHH-HHHH
Confidence 222223333 233333349999999999999 899999999998 7654
No 21
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=99.74 E-value=1.6e-18 Score=125.05 Aligned_cols=119 Identities=14% Similarity=0.096 Sum_probs=84.3
Q ss_pred CCCCCCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEc-CCccEEEecCHHHHHHHHhhCCCCCCCCCchh
Q 043622 21 KIKNLPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNL-GTRRVLLLSSPSAVEECFTKSDVVFANRPRIL 99 (148)
Q Consensus 21 ~~~~~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~ 99 (148)
+.++.||||+ ++|++|++.... ..+++..+.++ ++||+++++++ ++.++++++||+++++|+.++ .|.+++...
T Consensus 23 ~~~~~~PGP~-~~p~lG~~~~~~-~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~ 97 (436)
T 2cd8_A 23 RTQQGTTASP-PVLDLGALGQDF-AADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNS 97 (436)
T ss_dssp ------------CCBHHHHHHHH-HHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGC
T ss_pred hhccCCCCCC-ccccCCCCCccc-ccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCccccccc
Confidence 3445678999 999999986333 56678899999 99999999997 778899999999999999865 566654321
Q ss_pred hhhhh---ccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 100 LGEHL---GYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 100 ~~~~~---~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
..... ...+.++++.+ |+.|+++|+++++ +|+.+.++.+.+ .+++
T Consensus 98 ~~~~~~~~~~~~~~l~~~d-g~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 145 (436)
T 2cd8_A 98 TTPLTEAEAALNHNMLESD-PPRHTRLRKLVAR-EFTMRRVELLRP-RVQE 145 (436)
T ss_dssp SSCCCTTGGGTCCSGGGCC-TTHHHHHHHHHGG-GSSHHHHHTTHH-HHHH
T ss_pred ccccccccccccccccccC-chHHHHHHHHhHH-hhCHHHHHHHHH-HHHH
Confidence 11110 11236777766 9999999999999 899999999998 7764
No 22
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=99.73 E-value=5.2e-18 Score=122.78 Aligned_cols=115 Identities=17% Similarity=0.122 Sum_probs=76.1
Q ss_pred CCCCC-CCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchhhhh
Q 043622 24 NLPPN-PFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRILLGE 102 (148)
Q Consensus 24 ~~ppg-p~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~ 102 (148)
+.||| |. ++|++||+..+ ..+.+..+.+++++||+++++++++.++++++||+.+++|+.++...|.+++......
T Consensus 4 ~~PPg~p~-~~P~iG~~~~~--~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~ 80 (455)
T 2cib_A 4 VALPRVSG-GHDEHGHLEEF--RTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMT 80 (455)
T ss_dssp -CCCBCSC-CCBTTBTHHHH--TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGH
T ss_pred CCCCCCCC-CCCCccCHHHH--hhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHH
Confidence 57888 77 89999999988 5678899999999999999999999899999999999999987666666655432222
Q ss_pred hhccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 103 HLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 103 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
... + .+++ .+ |+.|+++|+++++ +|+.+.++++.+ .+++
T Consensus 81 ~~~-g-~~~~-~~-~~~~~~~R~~~~~-~f~~~~l~~~~~-~i~~ 119 (455)
T 2cib_A 81 PIF-G-EGVV-FD-ASPERRKEMLHNA-ALRGEQMKGHAA-TIED 119 (455)
T ss_dssp HHH-C------------------------CCHHHHHHHHH-HHHH
T ss_pred hhc-C-Cccc-cC-cHHHHHHHhhhcc-ccCHHHHHHHHH-HHHH
Confidence 111 1 3543 45 9999999999999 899999999998 7754
No 23
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=99.72 E-value=1.9e-18 Score=125.29 Aligned_cols=115 Identities=17% Similarity=0.265 Sum_probs=76.6
Q ss_pred CCCCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCC-CCCCchhhh
Q 043622 23 KNLPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVF-ANRPRILLG 101 (148)
Q Consensus 23 ~~~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~-~~~~~~~~~ 101 (148)
+..||||. ++|++||+..+ ..+.+..+.++++ ||+++++++++.++++++||+.+++|+.++ .| .+.+.....
T Consensus 22 ~eppPgP~-~~P~iG~~~~~--~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~ 95 (467)
T 3dbg_A 22 REPPVAGG-GVPLLGHGWRL--ARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESL 95 (467)
T ss_dssp CBCCEECC-CCSTTHHHHHH--HHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC----------
T ss_pred CCCCCCCC-CCCcccchHHh--ccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHH
Confidence 44688999 99999999988 4678889999988 999999999999999999999999999876 45 333322211
Q ss_pred hhhccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 102 EHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 102 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
.... +.+++++.+ |+.|+++|+++++ +|+.+.++++.+ .+++
T Consensus 96 ~~~~-g~~~l~~~d-g~~h~~~R~~l~~-~fs~~~l~~~~~-~i~~ 137 (467)
T 3dbg_A 96 EGLL-GKEGVATAN-GPLHRRQRRTIQP-AFRLDAIPAYGP-IMEE 137 (467)
T ss_dssp ----------------------CGGGHH-HHSTTTSTTTHH-HHHH
T ss_pred HHhc-CCCCcccCC-cHHHHHHHHHhhh-hhCHHHHHHHHH-HHHH
Confidence 1111 125777777 9999999999999 899999999998 7654
No 24
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=99.65 E-value=1e-17 Score=121.97 Aligned_cols=117 Identities=15% Similarity=0.184 Sum_probs=89.4
Q ss_pred CCCCCCCCCCCC-CceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCC-CCCCCCch
Q 043622 21 KIKNLPPNPFPA-LPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDV-VFANRPRI 98 (148)
Q Consensus 21 ~~~~~ppgp~~~-~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~-~~~~~~~~ 98 (148)
...+.||||+ + +|++||+..+ ..+.+..+.+++++||+++++++++.++++++||+.+++++.++.. .+......
T Consensus 10 ~~~~~pPgp~-~~~P~iG~~~~~--~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~~~ 86 (491)
T 3dax_A 10 RQTGEPPLEN-GLIPYLGCALQF--GANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFA 86 (491)
T ss_dssp CCTTCCCEEE-EEESCTTTTGGG--TCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHHHH
T ss_pred cCCCCCCcCC-CcccchhhHHHH--hhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHHHH
Confidence 3456788988 6 7999999988 5678889999999999999999999999999999999999976542 22221111
Q ss_pred hhhhhhccCCCceE-eCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhh
Q 043622 99 LLGEHLGYNSTSLV-WSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRK 146 (148)
Q Consensus 99 ~~~~~~~~~~~~~~-~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~ 146 (148)
.....++ .+++ ..+ |+.|+++|+.+.+ .|+.+.++.+.+ .+.
T Consensus 87 ~~~~~~g---~~~~~~~~-g~~w~~~r~~~~~-~f~~~~l~~~~~-~~~ 129 (491)
T 3dax_A 87 TSAKAFG---HRSIDPMD-GNTTENINDTFIK-TLQGHALNSLTE-SMM 129 (491)
T ss_dssp HHHHHHT---CCCCCGGG-TSBCCCHHHHHHH-HHSHHHHHHHHH-HHH
T ss_pred HHHHHcC---CCcccccc-hhHHHHHHHHHHH-hcCcccHHHHHH-HHH
Confidence 1112222 4544 556 8999999999999 899999998877 543
No 25
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=99.62 E-value=4.6e-17 Score=115.77 Aligned_cols=106 Identities=15% Similarity=0.128 Sum_probs=86.8
Q ss_pred CCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCC-chhhhhhhccCCCc
Q 043622 32 ALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRP-RILLGEHLGYNSTS 110 (148)
Q Consensus 32 ~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~ 110 (148)
..|++||+..+ ..+.+..+.+++++||++++ ++++.+.++++||+.+++|+.++ .|.+++ ......... +.+
T Consensus 6 ~~p~iGnl~~~--~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~--g~~ 78 (389)
T 1n97_A 6 LREAWPYLKDL--QQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLT--GRG 78 (389)
T ss_dssp HHHHHHHHHHH--HHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHH--CSS
T ss_pred cccccccHHHH--hhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHh--CCc
Confidence 57899999888 45678899999999999999 88888999999999999999876 677765 222222221 267
Q ss_pred eEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 111 LVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 111 ~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
+++++ |+.|+++|+++++ +|+++.++++.+ .+++
T Consensus 79 l~~~~-g~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 112 (389)
T 1n97_A 79 LLTDW-GESWKEARKALKD-PFLPKNVRGYRE-AMEE 112 (389)
T ss_dssp TTTCC-HHHHHHHHHHHCG-GGSHHHHHTTHH-HHHH
T ss_pred cccCC-cHHHHHHHHHhCc-ccCHHHHHHHHH-HHHH
Confidence 77776 9999999999999 899999999998 7754
No 26
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=99.61 E-value=1.6e-16 Score=115.95 Aligned_cols=115 Identities=18% Similarity=0.246 Sum_probs=84.0
Q ss_pred HhhcCCCCCCCCCCCC-CceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCC
Q 043622 17 HLNNKIKNLPPNPFPA-LPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANR 95 (148)
Q Consensus 17 ~~~~~~~~~ppgp~~~-~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~ 95 (148)
...++..+.||||+ + +|++||++.+ ..+.+..+.+|+++||+++++++++.++++++||+++++++.++...+..+
T Consensus 11 ~~~~~~~~~PPgp~-~~~P~iG~~~~~--~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~ 87 (498)
T 3b6h_A 11 RRRTRRPGEPPLDL-GSIPWLGYALDF--GKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFH 87 (498)
T ss_dssp --CCCCTTCCCEEC-CSSTTTBTHHHH--HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECC
T ss_pred HHhccCCCCCCCCC-CCCcchhhHHHh--ccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCch
Confidence 33445667899998 7 8999999988 456789999999999999999999999999999999999997655323322
Q ss_pred Cchh--hhhhhccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhh
Q 043622 96 PRIL--LGEHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSC 142 (148)
Q Consensus 96 ~~~~--~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~ 142 (148)
+... ....+ +.+++..+ |+.| |+++.+ .|+.+.++.+.+
T Consensus 88 ~~~~~~~~~~~---g~~~~~~~-~~~~---rr~~~~-~~~~~~l~~~~~ 128 (498)
T 3b6h_A 88 AYAIFLMERIF---DVQLPHYS-PSDE---KARMKL-TLLHRELQALTE 128 (498)
T ss_dssp HHHHHHHHHTS---CCCCTTCC-HHHH---HHHHHT-TSSHHHHHHHHH
T ss_pred hhHHHHHHHHc---CCCccccC-HHHH---HHHHHH-hhchHhHHHHHH
Confidence 2221 11222 24545444 6666 566667 799888888866
No 27
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=99.60 E-value=1.3e-16 Score=115.65 Aligned_cols=117 Identities=17% Similarity=0.215 Sum_probs=86.2
Q ss_pred HhhcCCCCCCCCCCCC-CceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCC
Q 043622 17 HLNNKIKNLPPNPFPA-LPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANR 95 (148)
Q Consensus 17 ~~~~~~~~~ppgp~~~-~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~ 95 (148)
...+...+.||||+ + +|++||++.+ ..+.+..+.+++++||+++++++++.++++++||+.+++++.++.. +..+
T Consensus 11 ~~~~~~~~~pPgp~-~~~P~iG~~~~~--~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~ 86 (475)
T 3b98_A 11 GRRTRRRNEPPLDK-GMIPWLGHALEF--GKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQT 86 (475)
T ss_dssp --CCCCTTCCCEEC-CSSTTTBTHHHH--HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESH
T ss_pred hhcccCCCCCCCCC-CCcchHHhHHHH--hhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCch
Confidence 33445567899999 7 8999999988 4568899999999999999999999999999999999999976542 3322
Q ss_pred Cch-hh-hhhhccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhh
Q 043622 96 PRI-LL-GEHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRK 146 (148)
Q Consensus 96 ~~~-~~-~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~ 146 (148)
+.. .. ...+ +.+++.++ |+.| |+++.+ +|+++.++.+.+ .+.
T Consensus 87 ~~~~~~~~~~~---g~~~~~~~-~~~~---R~~~~~-~f~~~~l~~~~~-~~~ 130 (475)
T 3b98_A 87 SYAQVLMKRIF---NMILPSHN-PESE---KKRAEM-HFQGASLTQLSN-SMQ 130 (475)
T ss_dssp HHHHHHHHHTT---CCCCTTCC-HHHH---HHHHHH-HTSHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHh---CCCCCCCC-hHHH---HHHHHH-HcChhhHHHHHH-HHH
Confidence 211 11 1122 24555444 6655 678888 899999999987 654
No 28
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=99.60 E-value=1.7e-15 Score=108.35 Aligned_cols=113 Identities=15% Similarity=0.152 Sum_probs=84.8
Q ss_pred CCCCCCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEE----c-CC-ccEEEecCHHHHHHHH-hhCCCCCC
Q 043622 21 KIKNLPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLN----L-GT-RRVLLLSSPSAVEECF-TKSDVVFA 93 (148)
Q Consensus 21 ~~~~~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~----~-~~-~~~v~i~~p~~~~~i~-~~~~~~~~ 93 (148)
...++||||+ ++|+. + ..+++..+.++ ++||++++++ + ++ .++++++||+.+++|+ .++ .|.
T Consensus 7 ~~~~lppgp~-~~p~~-----~--~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~ 75 (406)
T 1ued_A 7 QVAPLLREPA-NFQLR-----T--NCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFT 75 (406)
T ss_dssp SCCCEEECCT-TTTCE-----E--TTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEE
T ss_pred CCCCCcccCc-ccCCC-----C--CCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--ccc
Confidence 3467889999 88876 3 56678889999 9999999999 6 78 8999999999999999 543 244
Q ss_pred CCCchhhh--hhh-c-cCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 94 NRPRILLG--EHL-G-YNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 94 ~~~~~~~~--~~~-~-~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
+++..... ... . ..+.++++.+ |+.|+++|+++++ .|+.+.++++.+ .+++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~~~~~R~~~~~-~fs~~~l~~~~~-~i~~ 130 (406)
T 1ued_A 76 TRPQFTQSKSGAHVEAQFVGQISTYD-PPEHTRLRKMLTP-EFTVRRIRRMEP-AIQS 130 (406)
T ss_dssp CCCCC---------CGGGTTCGGGCC-TTHHHHHHHHHGG-GSSHHHHHHHHH-HHHH
T ss_pred ccccccccccccccccccccccccCC-CHHHHHHHHHhhh-hhCHHHHHHHHH-HHHH
Confidence 44331111 010 0 0124667666 9999999999999 899999999998 7754
No 29
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=99.59 E-value=1.9e-15 Score=107.90 Aligned_cols=113 Identities=10% Similarity=0.042 Sum_probs=79.2
Q ss_pred CCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcC-CccEEEecCHHHHHHHHhhCC-CCCCCCCchhhhh
Q 043622 25 LPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG-TRRVLLLSSPSAVEECFTKSD-VVFANRPRILLGE 102 (148)
Q Consensus 25 ~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-~~~~v~i~~p~~~~~i~~~~~-~~~~~~~~~~~~~ 102 (148)
.||||+ ++|++|++.. +++..++++. +||+++++.++ +.+.+++++++.+++++.++. ..+..++......
T Consensus 2 ~pPGp~-~~P~~g~~~~-----~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~ 74 (404)
T 1jfb_A 2 MASGAP-SFPFSRASGP-----EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELS 74 (404)
T ss_dssp ----CC-BSSCCCSSTT-----SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCS
T ss_pred CCCCCC-CCCCCCCcCC-----CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCcccc
Confidence 489999 9999998653 4566778885 59999999875 566677899999999998753 2233332221110
Q ss_pred ----hhccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 103 ----HLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 103 ----~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
....+..++++++ |+.|+++||++++ +|+.+.++++.+ .+++
T Consensus 75 ~~~~~~~~~~~~l~~~~-g~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 120 (404)
T 1jfb_A 75 ASGKQAAKAKPTFVDMD-PPEHMHQRSMVEP-TFTPEAVKNLQP-YIQR 120 (404)
T ss_dssp HHHHHHTTSCCCGGGCC-TTHHHHHHTTTGG-GGSHHHHHHHHH-HHHH
T ss_pred ccccchhcccCcccccC-chhHHHHHHHhhh-hcCHHHHHHHHH-HHHH
Confidence 1112224667777 9999999999999 899999999999 7754
No 30
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=99.54 E-value=1.2e-14 Score=104.97 Aligned_cols=99 Identities=18% Similarity=0.347 Sum_probs=76.9
Q ss_pred cCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchh--hhhhhc--cCCCceEeCCCCchH
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRIL--LGEHLG--YNSTSLVWSPYGSHW 120 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~g~~w 120 (148)
+...+..+.+|+++||+++++++++.+.|+++||+++++|+.+ ..|.+++... .....+ ..+.|++++.+|+.|
T Consensus 9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w 86 (456)
T 3mdm_A 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYERW 86 (456)
T ss_dssp CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTC--TTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhh--ccccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence 4567889999999999999999999999999999999999964 3455544321 111111 123577666559999
Q ss_pred HHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 121 RNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 121 ~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
+++||++++ +|+.+.++++.+ .+++
T Consensus 87 ~~~Rr~~~~-~fs~~~l~~~~~-~i~~ 111 (456)
T 3mdm_A 87 HKQRRVIDL-AFSRSSLVSLME-TFNE 111 (456)
T ss_dssp HHHHHHHGG-GGSHHHHHTTHH-HHHH
T ss_pred HHHHhhccc-ccCHHHHHHHHH-HHHH
Confidence 999999999 899999999998 7654
No 31
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=99.53 E-value=1.6e-14 Score=103.49 Aligned_cols=115 Identities=10% Similarity=0.078 Sum_probs=82.2
Q ss_pred CCCCCCCCCCceeeecchhcccCchHHHHHHHHhhc-CCeeEEEc-CCccEEEecCHHHHHHHHhhCCCCCCCCCchhhh
Q 043622 24 NLPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKH-GPILLLNL-GTRRVLLLSSPSAVEECFTKSDVVFANRPRILLG 101 (148)
Q Consensus 24 ~~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~y-g~v~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~ 101 (148)
..||+|+ .+|.+.....+ ..+++..+.++ ++| |+++++.+ ++.+.++++|++++++|+.++. +.+++.....
T Consensus 5 ~~~~~~~-~~P~~~~~~~~--~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~ 78 (412)
T 2zbx_A 5 ATTPQTT-DAPAFPSNRSC--PYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDNF 78 (412)
T ss_dssp ---CCCC-SSCBSSCCCSS--TTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTTS
T ss_pred CCCCCCC-CCCCCCCCchh--ccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCcccccc
Confidence 4567787 77766333344 56788899999 777 99999997 7889999999999999997643 4333321101
Q ss_pred hh-------hccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 102 EH-------LGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 102 ~~-------~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
.. ....+.++++.+ |+.|+++|+++++ .|+.+.++.+.+ .+++
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~-g~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 128 (412)
T 2zbx_A 79 PATSPRFEAVRESPQAFIGLD-PPEHGTRRRMTIS-EFTVKRIKGMRP-EVEE 128 (412)
T ss_dssp CCCSGGGC----CCCCGGGCC-TTHHHHHHTTTGG-GGSHHHHHHHHH-HHHH
T ss_pred cccccccccccccccccccCC-cHHHHHHHHHhhh-hcCHHHHHHHHH-HHHH
Confidence 00 000124666666 9999999999999 899999999998 7764
No 32
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=99.52 E-value=8.3e-15 Score=104.95 Aligned_cols=108 Identities=8% Similarity=0.112 Sum_probs=82.2
Q ss_pred CCceeeecchhcccCchHHHHHHHHhhcC-CeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchh--hhhhhccCC
Q 043622 32 ALPIVGHLYLIFKNKPLHRTLSQLSSKHG-PILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRIL--LGEHLGYNS 108 (148)
Q Consensus 32 ~~p~~G~~~~~~~~~~~~~~~~~~~~~yg-~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~ 108 (148)
+.|++|++..+ ..+++..+.+++++|| +++++.+++.+++++++|+.++.++. . ..|.+..... ..... .+.
T Consensus 7 g~P~lG~~~~~--~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~-~g~ 81 (417)
T 1izo_A 7 HDKSLDNSLTL--LKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYD-T-DRFQRQNALPKRVQKSL-FGV 81 (417)
T ss_dssp BCCCTTHHHHH--HHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTC-T-TTEECTTCSCHHHHTTT-TCT
T ss_pred CCCccchHHHH--hhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHhc-c-cccccccccccchhhhh-ccc
Confidence 35799999988 4567889999999998 89999988889999999999986543 2 3454432211 11111 122
Q ss_pred CceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 109 TSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 109 ~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
.++++++ |+.|+++|+++++ +|+++.++.+.+ .+++
T Consensus 82 ~~l~~~d-g~~h~~~R~~~~~-~f~~~~l~~~~~-~i~~ 117 (417)
T 1izo_A 82 NAIQGMD-GSAHIHRKMLFLS-LMTPPHQKRLAE-LMTE 117 (417)
T ss_dssp TCGGGCC-HHHHHHHHHHHHH-TSSHHHHHHHHH-HHHH
T ss_pred cceeecC-ChHHHHHHHHhhh-hcCHHHHHHHHH-HHHH
Confidence 4666666 9999999999999 899999999998 7654
No 33
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=99.49 E-value=1.6e-14 Score=103.35 Aligned_cols=107 Identities=10% Similarity=0.109 Sum_probs=80.6
Q ss_pred CceeeecchhcccCchHHHHHHHHhhc-CCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchh--hhhhhccCCC
Q 043622 33 LPIVGHLYLIFKNKPLHRTLSQLSSKH-GPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRIL--LGEHLGYNST 109 (148)
Q Consensus 33 ~p~~G~~~~~~~~~~~~~~~~~~~~~y-g~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~ 109 (148)
.|++|++..+ ..+++.++.+++++| |+++++.+++.+++++++|+.++ ++.+. ..|.++.... ..... .+..
T Consensus 7 ~P~iG~~~~~--~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~-~g~~ 81 (415)
T 3awm_A 7 TKGPDETLSL--LADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTL-LGQG 81 (415)
T ss_dssp --CCCCHHHH--HHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTT-SCSS
T ss_pred CCccchHHHH--HhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhhc-cCCc
Confidence 3589999888 456888999999999 79999998888999999999986 66544 3455443221 11111 1224
Q ss_pred ceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 110 SLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 110 ~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
+++..+ |+.|+++|+++++ +|+++.++.+.+ .+++
T Consensus 82 ~l~~~d-g~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 116 (415)
T 3awm_A 82 GVQGLD-GETHRHRKQMFMG-LMTPERVRALAQ-LFEA 116 (415)
T ss_dssp SGGGCC-HHHHHHHHHHHHT-TCCHHHHHHHHH-HHHH
T ss_pred ceeecC-cHHHHHHHHHHHH-hcCHHHHHHHHH-HHHH
Confidence 666666 9999999999999 899999999998 7654
No 34
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=99.47 E-value=7.8e-14 Score=99.83 Aligned_cols=117 Identities=13% Similarity=0.114 Sum_probs=77.3
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhC
Q 043622 9 IALCIVATHLNNKIKNLPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKS 88 (148)
Q Consensus 9 ~~~~~~~~~~~~~~~~~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~ 88 (148)
.+..++++..+.++.+.+|||+ . ..+++..+.++++ ||++ +.++.+.++++|++.+++++.++
T Consensus 4 ~~~~~~iyr~~~~pl~~~PGp~-~------------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~ 66 (411)
T 2jjn_A 4 DVETTCCARRTLTTIDEVPGMA-D------------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT 66 (411)
T ss_dssp -------------CCCSCCCSS-C------------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT
T ss_pred hhHhHHhhhcccCCCCCCCCcc-c------------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc
Confidence 3344445555556666667777 1 2346678888876 9998 56667899999999999999864
Q ss_pred CCCCCCCCchhhhhhhccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 89 DVVFANRPRILLGEHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
..|.+++..... .....+.++++.+ |+.|+++|+++++ +|+++.++.+.+ .+++
T Consensus 67 -~~f~~~~~~~~~-~~~~~~~~~~~~~-g~~~~~~R~~~~~-~fs~~~l~~~~~-~i~~ 120 (411)
T 2jjn_A 67 -ATFSSDPTRVIE-GASPTPGMIHEID-PPEHRALRKVVSS-AFTPRTISDLEP-RIRD 120 (411)
T ss_dssp -TTEESCGGGGST-TCCCCTTCGGGCC-TTHHHHHHHHHHH-HSCHHHHHTTHH-HHHH
T ss_pred -ccccCcccccCC-cccccccccccCC-chHHHHHHHHhhh-hcCHHHHHHHHH-HHHH
Confidence 467766543211 1112235677776 9999999999999 899999999999 7764
No 35
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=99.46 E-value=1e-13 Score=99.92 Aligned_cols=117 Identities=14% Similarity=0.146 Sum_probs=82.4
Q ss_pred CCCCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEE--------cCCccEEEecCHHHHHHHHhhCCCCCCC
Q 043622 23 KNLPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLN--------LGTRRVLLLSSPSAVEECFTKSDVVFAN 94 (148)
Q Consensus 23 ~~~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~--------~~~~~~v~i~~p~~~~~i~~~~~~~~~~ 94 (148)
...|++|. .+.++...... ..+++..++++ ++||+|+++. +|+.+.+++++++.+++|+.+. ..|++
T Consensus 17 ~~~p~~~~-~~~~~~~~~~~--~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~ 91 (433)
T 3ivy_A 17 VPSPNLPP-GFDFTDPAIYA--ERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSS 91 (433)
T ss_dssp ---CCCCT-TCCTTCHHHHT--TCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEES
T ss_pred cCCCCCCC-CCCCCCHHHhh--cCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccC
Confidence 45566666 55554433222 45688899999 7899999998 4447899999999999999754 45665
Q ss_pred CCchhhhh--------hhccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 95 RPRILLGE--------HLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 95 ~~~~~~~~--------~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
++...... .....+.+++..+ |+.|+++|+++++ +|+++.++++.+ .+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 149 (433)
T 3ivy_A 92 YENGVIPRFKNDIAREDIEVQRFVMLNMD-APHHTRLRKIISR-GFTPRAVGRLHD-ELQE 149 (433)
T ss_dssp TTTCSCCCCCTTCCHHHHHGGGGSGGGCC-TTHHHHHHHHHGG-GSCHHHHHTTHH-HHHH
T ss_pred CcccccccccccccccccccccCCccccC-hHHHHHHHHHHHH-hhCHHHHHHHHH-HHHH
Confidence 54332111 1112235777677 9999999999999 899999999998 7654
No 36
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=99.45 E-value=1e-13 Score=99.14 Aligned_cols=112 Identities=12% Similarity=0.141 Sum_probs=83.3
Q ss_pred CCCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEc-CCcc-EEEecCHHHHHHHHhhCCCCCCCCCchhhh
Q 043622 24 NLPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNL-GTRR-VLLLSSPSAVEECFTKSDVVFANRPRILLG 101 (148)
Q Consensus 24 ~~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~-~~~~-~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~ 101 (148)
+.+|+|+ ++|+.++ . ..+++..+++++ +||+++++.+ ++.+ .++++|++.+++|+.+ ..|.+++.....
T Consensus 8 ~~~~~~~-~~p~~~~---~--~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~~ 78 (406)
T 1s1f_A 8 QAVPPVR-DWPAVDL---P--GSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDRQ 78 (406)
T ss_dssp CCSCCEE-ECCCCCC---C--TTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTTT
T ss_pred hhccCCC-CCCCCcc---c--ccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCCC
Confidence 4566777 6777655 2 556777888885 7999999986 5666 9999999999999986 356665433111
Q ss_pred h----h-hccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 102 E----H-LGYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 102 ~----~-~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
. . ....+.++++++ |+.|+++|+++++ .|+++.++.+.+ .+++
T Consensus 79 ~~~~~~~~~~~~~~l~~~d-g~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 126 (406)
T 1s1f_A 79 VTRLAPHFIPARGAVGFLD-PPDHTRLRRSVAA-AFTARGVERVRE-RSRG 126 (406)
T ss_dssp BCBSSSSCSSCTTSGGGCC-TTHHHHHHHHHHH-HHSHHHHHHHHH-HHHH
T ss_pred cccccccccccccccccCC-chHHHHHHHHHHH-hhCHHHHHHHHH-HHHH
Confidence 0 1 111236777777 9999999999999 899999999998 7754
No 37
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=99.45 E-value=4.8e-14 Score=102.82 Aligned_cols=121 Identities=14% Similarity=0.105 Sum_probs=83.0
Q ss_pred CCCCCCCCCCCCCceeeecchhc---ccCchHHHHHHHHhhcCC-eeEEEcCCccE-------EEecCHHHHHHHHhhCC
Q 043622 21 KIKNLPPNPFPALPIVGHLYLIF---KNKPLHRTLSQLSSKHGP-ILLLNLGTRRV-------LLLSSPSAVEECFTKSD 89 (148)
Q Consensus 21 ~~~~~ppgp~~~~p~~G~~~~~~---~~~~~~~~~~~~~~~yg~-v~~~~~~~~~~-------v~i~~p~~~~~i~~~~~ 89 (148)
.+.+.||||. ++|++|++.++. ...+.+.++.++.++||+ |+++++++.++ +++++++..+.++.+..
T Consensus 25 ~p~~~pPGp~-g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~ 103 (495)
T 3dsk_A 25 LPIRNIPGNY-GLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDK 103 (495)
T ss_dssp CCBCCCCCCC-CSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred CCCCCCCCCC-CCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeeccccc
Confidence 4556889999 999999997764 246788999999999999 99999988887 66677766655554321
Q ss_pred ----CCCCCCCchhhhhhhccCC-CceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 90 ----VVFANRPRILLGEHLGYNS-TSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 90 ----~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
..+........ ..++..+ .+++..+ |+.|+++|+++.+ .|+... +.+.+ .+++
T Consensus 104 v~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~-g~~h~~~R~~~~~-~f~~~~-~~~~~-~i~~ 161 (495)
T 3dsk_A 104 VEKKDLLTGTYMPST-ELTGGYRILSYLDPS-EPKHEKLKNLLFF-LLKSSR-NRIFP-EFQA 161 (495)
T ss_dssp EECSSCTTSSSCCCG-GGGTTCCCGGGCCTT-SHHHHHHHHHHHH-HHHHTT-TTHHH-HHHH
T ss_pred ccccccccccCCCCc-cccCCCcceeeeCCC-chHHHHHHHHHHH-HHHHHH-HHHHH-HHHH
Confidence 11211111111 3333211 2344445 9999999999999 798754 77777 6543
No 38
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=99.44 E-value=1.7e-13 Score=98.04 Aligned_cols=97 Identities=7% Similarity=0.006 Sum_probs=72.7
Q ss_pred cCchHHHHHHHHhhcCCeeEEEc-CCccEEEecCHHHHHHHHhhCCCCCCCCCchhhhh----hhc---cCCCceEeCCC
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNL-GTRRVLLLSSPSAVEECFTKSDVVFANRPRILLGE----HLG---YNSTSLVWSPY 116 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~ 116 (148)
..+++..+.+| ++||+++++++ ++.++++++|++.+++|+.++. +.+++...... ... ....++++.+
T Consensus 23 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 98 (408)
T 3abb_A 23 PYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFPLIGVD- 98 (408)
T ss_dssp TTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCTTTTCC-
T ss_pred ccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCccccccccccccCC-
Confidence 56778899999 89999999997 7889999999999999997643 33332200000 000 0123666666
Q ss_pred CchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 117 GSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 117 g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
|+.|+++|+++++ .|+.+.++.+.+ .+++
T Consensus 99 g~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 127 (408)
T 3abb_A 99 DPVHARQRRMLIP-SFGVKRMNAIRP-RLQS 127 (408)
T ss_dssp TTHHHHHHHHHGG-GGCHHHHHHHHH-HHHH
T ss_pred chHHHHHHHHhhh-hcCHHHHHHHHH-HHHH
Confidence 9999999999999 899999999998 7754
No 39
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=99.43 E-value=1.3e-13 Score=97.85 Aligned_cols=98 Identities=13% Similarity=0.119 Sum_probs=74.1
Q ss_pred cCchHHHHHHHHhhcCCeeEEEcCC----ccEEEecCHHHHHHHHhhCCCCCCCCCchhhhhhhccCCCceEeCCCCchH
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNLGT----RRVLLLSSPSAVEECFTKSDVVFANRPRILLGEHLGYNSTSLVWSPYGSHW 120 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~~~----~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w 120 (148)
..+++..+.++ ++||+++++.+++ .++++++||+.+++|+. +...|.+++...........+.+++..+ |+.|
T Consensus 11 ~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~~ 87 (384)
T 3oo3_A 11 RLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILA-DHERFSSMRPVDDEADRALLPGILQAYD-PPDH 87 (384)
T ss_dssp TTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHH-CTTTEECSCCCC-----CCCTTCGGGCC-TTHH
T ss_pred ccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHh-CchhccCCccccccccccccccccccCC-ChhH
Confidence 56788899999 5999999998876 89999999999999995 4467777765432222122224555556 9999
Q ss_pred HHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 121 RNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 121 ~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
+++|+++++ +|+.+.++.+.+ .+++
T Consensus 88 ~~~R~~~~~-~fs~~~l~~~~~-~i~~ 112 (384)
T 3oo3_A 88 TRLRRTVAP-AYSARRMERLRP-RIEE 112 (384)
T ss_dssp HHHHHHHGG-GGCHHHHHHHHH-HHHH
T ss_pred HHHHHHHHH-hhCHHHHHHHHH-HHHH
Confidence 999999999 899999999998 7654
No 40
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=99.42 E-value=3.1e-13 Score=96.82 Aligned_cols=97 Identities=19% Similarity=0.215 Sum_probs=77.0
Q ss_pred cCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchhhh-----hhhccCCCceEeCCCCch
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRILLG-----EHLGYNSTSLVWSPYGSH 119 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~ 119 (148)
..+++..+.++ ++||+++++++++.+.++++|++.+++++.++. |.+++..... ......+.++++.+ |+.
T Consensus 19 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~ 94 (411)
T 3a4g_A 19 WQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPMMILMD-PPD 94 (411)
T ss_dssp TTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCCGGGCC-TTH
T ss_pred hcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcccccccccCC-chH
Confidence 56788899999 999999999999999999999999999998653 7666543211 11111236677666 999
Q ss_pred HHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 120 WRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 120 w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
|+++|+++++ .|+++.++++.+ .+++
T Consensus 95 h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 120 (411)
T 3a4g_A 95 HTRLRKLVGR-SFTVRRMNELEP-RITE 120 (411)
T ss_dssp HHHHHHHHHT-TCCHHHHHHHHH-HHHH
T ss_pred HHHHHHHhhh-hhCHHHHHHHHH-HHHH
Confidence 9999999999 899999999998 7754
No 41
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=99.42 E-value=3.1e-13 Score=96.44 Aligned_cols=98 Identities=10% Similarity=0.020 Sum_probs=76.3
Q ss_pred cCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchhh----hhhhccCCCceEeCCCCchH
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRILL----GEHLGYNSTSLVWSPYGSHW 120 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~w 120 (148)
..+++..++++ ++||+++++.+++.+++++++++.+++++.++ ..|.+++.... .......+.++++.+ |+.|
T Consensus 12 ~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~h 88 (404)
T 3ejb_B 12 LKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMMLFQN-QPDH 88 (404)
T ss_dssp HHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSGGGCC-TTHH
T ss_pred ccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcchhhcC-CchH
Confidence 45678888888 58999999999999999999999999999876 56666553211 001111125777777 9999
Q ss_pred HHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 121 RNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 121 ~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
+++|+++++ +|+++.++.+.+ .+++
T Consensus 89 ~~~Rr~~~~-~fs~~~l~~~~~-~i~~ 113 (404)
T 3ejb_B 89 RRLRTLASG-AFTPRTTESYQP-YIIE 113 (404)
T ss_dssp HHHHHHHHG-GGSHHHHHTTHH-HHHH
T ss_pred HHHHHHHHh-hcCHHHHHHHHH-HHHH
Confidence 999999999 899999999998 7654
No 42
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=99.41 E-value=1.4e-13 Score=98.99 Aligned_cols=108 Identities=15% Similarity=0.119 Sum_probs=79.1
Q ss_pred eeeecchhc-cc--CchHHHHHHHHhhcCCeeEEEc-CCccEEEecCHHHHHHHHhhCCCCCCCCCc-hhhh-----h-h
Q 043622 35 IVGHLYLIF-KN--KPLHRTLSQLSSKHGPILLLNL-GTRRVLLLSSPSAVEECFTKSDVVFANRPR-ILLG-----E-H 103 (148)
Q Consensus 35 ~~G~~~~~~-~~--~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~-~~~~-----~-~ 103 (148)
++|++.... .. .+++..++++++ ||++++++. |+.+.+++++++.+++++.+. ..|++++. .... . .
T Consensus 11 ~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~~~~~~~~~~~~~ 88 (428)
T 1cpt_A 11 IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGSEILYDQNNEAFM 88 (428)
T ss_dssp HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHH
T ss_pred hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCccccccCCcccccchh
Confidence 678654331 01 346778888877 799999987 678999999999999999754 46766654 2111 1 1
Q ss_pred ---hc---cCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 104 ---LG---YNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 104 ---~~---~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
.+ ..+.++++++ |+.|+++||++++ +|+.+.++++.+ .+++
T Consensus 89 ~~~~g~~~~~~~~l~~~~-g~~~~~~Rr~~~~-~fs~~~l~~~~~-~i~~ 135 (428)
T 1cpt_A 89 RSISGGCPHVIDSLTSMD-PPTHTAYRGLTLN-WFQPASIRKLEE-NIRR 135 (428)
T ss_dssp HHHTTTSSCSSCCGGGCC-TTHHHHHHHHHHT-TSSHHHHGGGHH-HHHH
T ss_pred ccccccccccccccccCC-hHHHHHHHHHhhh-hhCHHHHHHHHH-HHHH
Confidence 22 1124677777 9999999999999 899999999999 7764
No 43
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=99.41 E-value=2.2e-13 Score=97.05 Aligned_cols=98 Identities=10% Similarity=0.095 Sum_probs=75.1
Q ss_pred cCchHHHHHHHHhhc--CCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchhhhhhhccCCCceEeCCCCchHHH
Q 043622 45 NKPLHRTLSQLSSKH--GPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRILLGEHLGYNSTSLVWSPYGSHWRN 122 (148)
Q Consensus 45 ~~~~~~~~~~~~~~y--g~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~ 122 (148)
..+++..+.+|+++| |+++++.+++ +.++++|++.+++|+. +...|.+++..........++.+++..+ |+.|++
T Consensus 18 ~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~ 94 (398)
T 4fb2_A 18 DGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQ-NTKAFSNKGVTFPRYETGEFELMMAGQD-DPVHKK 94 (398)
T ss_dssp TSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHT-CCSSEEGGGCSSSCC----CCCTTTTCC-TTHHHH
T ss_pred hcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHh-ChhhccCCcccccCCCCcccccCcccCC-chHHHH
Confidence 567899999999999 9999998875 5899999999999995 4556766554422111222223455555 999999
Q ss_pred HHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 123 LRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 123 ~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
+|+++++ +|+++.++++.+ .+++
T Consensus 95 ~R~~~~~-~f~~~~l~~~~~-~i~~ 117 (398)
T 4fb2_A 95 YRQLVAK-PFSPEATDLFTE-QLRQ 117 (398)
T ss_dssp HHHHHHT-TTCHHHHHTTHH-HHHH
T ss_pred HHHHHHH-hhCHHHHHHHHH-HHHH
Confidence 9999999 899999999998 7654
No 44
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=99.40 E-value=3.1e-13 Score=96.92 Aligned_cols=119 Identities=11% Similarity=0.077 Sum_probs=83.9
Q ss_pred cCCCCCCCCCCCCCcee--eecchhc-c--cCchHHHHHHHHhhcC--CeeEEEcCCccEEEecCHHHHHHHHhhCCCCC
Q 043622 20 NKIKNLPPNPFPALPIV--GHLYLIF-K--NKPLHRTLSQLSSKHG--PILLLNLGTRRVLLLSSPSAVEECFTKSDVVF 92 (148)
Q Consensus 20 ~~~~~~ppgp~~~~p~~--G~~~~~~-~--~~~~~~~~~~~~~~yg--~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~ 92 (148)
.+..++||||. ..|.. +.+-.+. . ..+++..+.+|+ +|| +++++...+ +.++++|++.+++|+.+ ...|
T Consensus 7 ~~~~~~~~~p~-~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~-~~~f 82 (415)
T 2zwu_A 7 QSNANLAPLPP-HVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYED-YRHF 82 (415)
T ss_dssp ----CCCCCCT-TSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHC-TTTE
T ss_pred cCccccCCCCC-CCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcC-cccc
Confidence 34568999999 87754 4322111 0 456788888885 799 999998333 68999999999999974 4467
Q ss_pred CCCC-chhhhhhhccCCCc-eEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 93 ANRP-RILLGEHLGYNSTS-LVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 93 ~~~~-~~~~~~~~~~~~~~-~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
.+++ ....... .. +.+ +++.+ |+.|+++|+++++ .|+.+.++.+.+ .+++
T Consensus 83 ~~~~~~~~~~~~-~~-~~~~l~~~~-g~~~~~~R~~~~~-~f~~~~l~~~~~-~i~~ 134 (415)
T 2zwu_A 83 SSECPFIPREAG-EA-YDFIPTSMD-PPEQRQFRALANQ-VVGMPVVDKLEN-RIQE 134 (415)
T ss_dssp ETTSCSSSHHHH-HH-CCCTTTTCC-TTTTHHHHHHHHH-HHSHHHHHHHHH-HHHH
T ss_pred CCCcccCCCCcc-cc-ccccCccCC-CcHHHHHHHHHHh-hhCHHHHHHHHH-HHHH
Confidence 7665 2221111 11 255 77776 9999999999999 899999999998 7754
No 45
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=99.38 E-value=5.3e-13 Score=95.81 Aligned_cols=97 Identities=12% Similarity=0.148 Sum_probs=75.0
Q ss_pred cCchHHHHHHHHhhcCCeeEEEc-CCccEEEecCHHHHHHHHhhCCCCCCCCCch-hhhhhhc--cCCCceEeCCCCchH
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNL-GTRRVLLLSSPSAVEECFTKSDVVFANRPRI-LLGEHLG--YNSTSLVWSPYGSHW 120 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~g~~w 120 (148)
..+++..+.++ ++||+++++++ ++.+.++++||+.+++|+.++ .|.+++.. .....+. ..+.++++.+ |+.|
T Consensus 36 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h 111 (417)
T 2y5n_A 36 GLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLSMD-PPEH 111 (417)
T ss_dssp SCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGGCC-TTHH
T ss_pred ccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCccCC-chHH
Confidence 45678899999 89999999997 788999999999999999864 36554332 1110011 1235677766 9999
Q ss_pred HHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 121 RNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 121 ~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
+++|+++++ .|+++.++++.+ .+++
T Consensus 112 ~~~R~~l~~-~fs~~~l~~~~~-~i~~ 136 (417)
T 2y5n_A 112 SRLRRLVVK-AFTARRAESLRP-RARE 136 (417)
T ss_dssp HHHHHHHHH-HSCHHHHHHTHH-HHHH
T ss_pred HHHHHHHhh-hcCHHHHHHHHH-HHHH
Confidence 999999999 899999999998 7754
No 46
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=99.36 E-value=1.6e-12 Score=92.88 Aligned_cols=97 Identities=15% Similarity=0.215 Sum_probs=76.2
Q ss_pred cCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCch--h-----h-----h-hhh-ccCCCc
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRI--L-----L-----G-EHL-GYNSTS 110 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~--~-----~-----~-~~~-~~~~~~ 110 (148)
..+++..+.++ ++||+++++++++.+.+++++++.+++|+.++ .|.+++.. . . . ... ...+.+
T Consensus 13 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (404)
T 1z8o_A 13 HVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATN 89 (404)
T ss_dssp TSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSS
T ss_pred ccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcccc
Confidence 56788899999 99999999999889999999999999999865 46655432 1 0 0 110 001357
Q ss_pred eEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 111 LVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 111 ~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
+++.+ |+.|+++|+++++ +|+++.++.+.+ .+++
T Consensus 90 l~~~~-g~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 123 (404)
T 1z8o_A 90 MGTSD-PPTHTRLRKLVSQ-EFTVRRVEAMRP-RVEQ 123 (404)
T ss_dssp GGGCC-TTHHHHHHHHHHT-TSCHHHHHHTHH-HHHH
T ss_pred cccCC-CcHHHHHHHHHHH-hhCHHHHHHHHH-HHHH
Confidence 77776 9999999999999 899999999998 7754
No 47
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=99.34 E-value=1.1e-12 Score=93.67 Aligned_cols=97 Identities=14% Similarity=0.171 Sum_probs=74.1
Q ss_pred cCchHHHHHHHHhhcCCeeEEEc-CCccEEEecCHHHHHHHHhhCCCCCCCCCc--h-hhhhhh-c-cCCCceEeCCCCc
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNL-GTRRVLLLSSPSAVEECFTKSDVVFANRPR--I-LLGEHL-G-YNSTSLVWSPYGS 118 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~--~-~~~~~~-~-~~~~~~~~~~~g~ 118 (148)
..+++..+.++ ++||+++++++ ++.+.++++|++.+++|+.++ .|.+++. . ...... . ..+.++++.+ |+
T Consensus 18 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~ 93 (403)
T 3aba_A 18 PFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLWQD-EP 93 (403)
T ss_dssp TTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTTCC-TT
T ss_pred ccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--CcccccccccccccccccccccccccccCC-ch
Confidence 45677788889 89999999997 789999999999999999864 3655532 1 100001 1 1235676666 99
Q ss_pred hHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 119 HWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 119 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
.|+++|+++++ .|+++.++++.+ .+++
T Consensus 94 ~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 120 (403)
T 3aba_A 94 EHTSDRKLLAK-EFTVRRMQALRP-NIQR 120 (403)
T ss_dssp HHHHHHHHHHH-HSCHHHHHTTHH-HHHH
T ss_pred hHHHHHHHHHh-hcCHHHHHHHHH-HHHH
Confidence 99999999999 899999999998 7754
No 48
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=99.31 E-value=2.1e-12 Score=92.58 Aligned_cols=97 Identities=12% Similarity=0.171 Sum_probs=75.6
Q ss_pred cCchHHHHHHHHhhcCCeeEEEcC-CccEEEecCHHHHHHHHhhCCCCCCCCCchh---h-hhhh---ccCCCceEeCCC
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNLG-TRRVLLLSSPSAVEECFTKSDVVFANRPRIL---L-GEHL---GYNSTSLVWSPY 116 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~~-~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~---~-~~~~---~~~~~~~~~~~~ 116 (148)
..+++..+++++++ |+++++.++ +.+.+++++++.+++|+.++ .|.+++... . .... ...+.++++.+
T Consensus 28 ~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d- 103 (417)
T 3tyw_A 28 PFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTD- 103 (417)
T ss_dssp TTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCC-
T ss_pred ccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcC-
Confidence 56788899999998 999999986 58999999999999999875 565543211 1 1111 01236777777
Q ss_pred CchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 117 GSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 117 g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
|+.|+++|+++++ +|+.+.++.+.+ .+++
T Consensus 104 g~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 132 (417)
T 3tyw_A 104 APEHTRYRRMLLP-AFTVRRVRAMRP-AVQA 132 (417)
T ss_dssp HHHHHHHHHHHGG-GGCHHHHHHTHH-HHHH
T ss_pred CcHHHHHHHHHHh-hhCHHHHHHHHH-HHHH
Confidence 9999999999999 899999999998 7754
No 49
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=99.31 E-value=3e-12 Score=91.59 Aligned_cols=96 Identities=15% Similarity=0.157 Sum_probs=74.3
Q ss_pred cCchHHHHHHHHhhcCCeeEEEc-CCccEEEecCHHHHHHHHhhCCCCCCCCCchh-hhhhhccCCCc--eEeCCCC---
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNL-GTRRVLLLSSPSAVEECFTKSDVVFANRPRIL-LGEHLGYNSTS--LVWSPYG--- 117 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~g--- 117 (148)
..+++..+.++ ++||+++++.+ ++.+.++++||+.+++|+.++ .|.+++... ....... +.+ +++.+ |
T Consensus 25 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~-~~~~~l~~~~-g~~~ 99 (404)
T 2xbk_A 25 MLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYVR-SPFLDLLISD-ADAE 99 (404)
T ss_dssp TTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSSC-CHHHHTTCBC-SCHH
T ss_pred ccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCcccc-cccccceeeC-CCCC
Confidence 45677889999 89999999997 788999999999999999764 365544331 1111111 245 66666 9
Q ss_pred ---chHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 118 ---SHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 118 ---~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
+.|+++|+++++ +|+++.++++.+ .+++
T Consensus 100 ~~~~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 130 (404)
T 2xbk_A 100 SGRRQHAETRRLLTP-LFSARRVLEMQP-KVEE 130 (404)
T ss_dssp HHHHHHHHHHHHHGG-GGCHHHHHHHHH-HHHH
T ss_pred CCCchHHHHHHHhhh-hcCHHHHHHHHH-HHHH
Confidence 999999999999 899999999998 7754
No 50
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=99.31 E-value=4.2e-12 Score=91.12 Aligned_cols=98 Identities=10% Similarity=0.096 Sum_probs=74.1
Q ss_pred cCchHHHHHHHHhhcC-CeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchhhhhhhccCCCceEeCCCCchHHHH
Q 043622 45 NKPLHRTLSQLSSKHG-PILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRILLGEHLGYNSTSLVWSPYGSHWRNL 123 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg-~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~ 123 (148)
..+++..++++++++| +|+++..++ +.++++|++.+++|+.+ ...|.+++...........+.++++.+ |+.|+++
T Consensus 37 ~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~~~~~~~~~~d-g~~h~~~ 113 (421)
T 3lxh_A 37 EQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYRS-PERFSSRVIWVPREAGEAYDMVPTKLD-PPEHTPY 113 (421)
T ss_dssp GGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHTC-TTTEETTCCSSSHHHHHHCCCTTTTCC-TTTHHHH
T ss_pred hcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHcC-hhhccCCcccCCcccccccccCCccCC-cHHHHHH
Confidence 3578889999988766 899988766 58889999999999954 456766653321212222235666666 9999999
Q ss_pred HhhhhhhcCChhhHhhhhhhhhhc
Q 043622 124 RKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 124 R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
|+++++ +|+++.++++.+ .+++
T Consensus 114 R~~~~~-~fs~~~l~~~~~-~i~~ 135 (421)
T 3lxh_A 114 RKAIDK-GLNLAEIRKLED-QIRT 135 (421)
T ss_dssp HHHHHH-HHSHHHHHTTHH-HHHH
T ss_pred HHHHhh-hcCHHHHHHHHH-HHHH
Confidence 999999 899999999998 7654
No 51
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=99.30 E-value=1.9e-12 Score=93.83 Aligned_cols=121 Identities=14% Similarity=0.106 Sum_probs=78.6
Q ss_pred CCCCCCCCCCCCCceeeecchhc---ccC-chHHHHHHHHhhcCC-eeEEEcCCc-------cEEEecCHHHHHHHHhh-
Q 043622 21 KIKNLPPNPFPALPIVGHLYLIF---KNK-PLHRTLSQLSSKHGP-ILLLNLGTR-------RVLLLSSPSAVEECFTK- 87 (148)
Q Consensus 21 ~~~~~ppgp~~~~p~~G~~~~~~---~~~-~~~~~~~~~~~~yg~-v~~~~~~~~-------~~v~i~~p~~~~~i~~~- 87 (148)
.+.+.+|||. ++|++|++.++. ... +.+.++.++.++||+ |+++++++. ..+++++.+..+.++..
T Consensus 6 ~Pl~~iPGp~-g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~ 84 (473)
T 3dan_A 6 KPLREIPGSY-GIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVS 84 (473)
T ss_dssp SCBCCCCCCC-CSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred CCCCCCCCCC-CCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCc
Confidence 4556778999 999999998753 134 678899999999999 999998643 34444555444344321
Q ss_pred ---CCCCCCCCCchhhhhhhcc-CCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 88 ---SDVVFANRPRILLGEHLGY-NSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 88 ---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
+...+....... ....+. ...+++..+ |+.|+++|+++++ .|++ .++.+.+ .+++
T Consensus 85 ~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~-~~~h~~~R~~~~~-~f~~-~~~~~~~-~i~~ 143 (473)
T 3dan_A 85 KVEKKDLFTGTYMPS-TKLTGGYRVLSYLDPS-EPRHAQLKNLLFF-MLKN-SSNRVIP-QFET 143 (473)
T ss_dssp TEECSSCTTSSSCCC-GGGGTTSCCGGGCCTT-SHHHHHHHHHHHH-HHHH-HHHHHHH-HHHH
T ss_pred ceeccccccccccCC-ccccCCCcceeeeCCC-cHHHHHHHHHHHH-HHHH-HHHHHHH-HHHH
Confidence 111121111111 122221 123445555 9999999999999 8999 4888888 7654
No 52
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.30 E-value=2.1e-12 Score=92.40 Aligned_cols=97 Identities=18% Similarity=0.206 Sum_probs=74.0
Q ss_pred cCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCc--hhhh-h------hhc-cCCCceEeC
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPR--ILLG-E------HLG-YNSTSLVWS 114 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~--~~~~-~------~~~-~~~~~~~~~ 114 (148)
..+++..+.++ ++||+++++++++.+.++++||+.+++|+.++. +.+++. .... . ... ..+.++++.
T Consensus 14 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (408)
T 1odo_A 14 GADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMFTA 90 (408)
T ss_dssp CTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGGGC
T ss_pred cCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccccccc
Confidence 56788899999 999999999988889999999999999997653 333321 1100 0 000 012466666
Q ss_pred CCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 115 PYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 115 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
+ |+.|+++|+++++ +|+++.++.+.+ .+++
T Consensus 91 ~-g~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 120 (408)
T 1odo_A 91 Y-GPNHRKLRRLVAP-AFSARRVDAMRP-AVEA 120 (408)
T ss_dssp C-HHHHHHHHHTTGG-GGSHHHHHHHHH-HHHH
T ss_pred C-ChHHHHHHHHhhh-hcCHHHHHHHHH-HHHH
Confidence 6 9999999999999 899999999998 7754
No 53
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=99.30 E-value=2.5e-12 Score=92.24 Aligned_cols=106 Identities=15% Similarity=0.197 Sum_probs=77.0
Q ss_pred eeeecchhc---ccCchHHHHHHHHhhcCCee-----EEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchh--hh-hh
Q 043622 35 IVGHLYLIF---KNKPLHRTLSQLSSKHGPIL-----LLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRIL--LG-EH 103 (148)
Q Consensus 35 ~~G~~~~~~---~~~~~~~~~~~~~~~yg~v~-----~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~--~~-~~ 103 (148)
+.|+..++. ...+++..++++. +||+++ ++.+ .+.++++|++.+++|+.++ ..|.+++... .. ..
T Consensus 11 ~~~~~~~~~~~~~~~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~ 86 (414)
T 2uuq_A 11 VMSHEFQLATAETWPNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELE 86 (414)
T ss_dssp --CCSCCCCCTTTTTCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHH
T ss_pred hhcCccCcCChhhccCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCccc
Confidence 345544443 1356778888885 689999 7765 6899999999999999875 5677665432 11 12
Q ss_pred h-c-cCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 104 L-G-YNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 104 ~-~-~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
+ . ..+.++++++ |+.|+++|+++++ +|+++.++++.+ .+++
T Consensus 87 ~~~~~~~~~l~~~~-g~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 129 (414)
T 2uuq_A 87 MIGLHDTPPMVMQD-PPVHTEFRKLVSR-GFTPRQVETVEP-TVRK 129 (414)
T ss_dssp HHTCSSSCCGGGCC-TTHHHHHHHHHHT-TSSHHHHHHHHH-HHHH
T ss_pred ccccccccccccCC-chhHHHHHHHhhh-hcCHHHHHHHHH-HHHH
Confidence 2 2 2246777776 9999999999999 899999999998 7754
No 54
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=99.30 E-value=2.8e-12 Score=91.94 Aligned_cols=97 Identities=12% Similarity=0.072 Sum_probs=74.5
Q ss_pred cCchHHHHHHHHhhcCCeeEEEc-CCccEEEecCHHHHHHHHhhCCCCCCCCCchhhh------hhhcc---CCCc-eEe
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNL-GTRRVLLLSSPSAVEECFTKSDVVFANRPRILLG------EHLGY---NSTS-LVW 113 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~------~~~~~---~~~~-~~~ 113 (148)
..+++..+.+|. +||+++++++ ++.++++++||+.+++++.++ .|.+++..... ..... .+.+ +++
T Consensus 21 ~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 97 (413)
T 2z36_A 21 PFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFTLDAATLQQLRSQPPLMLG 97 (413)
T ss_dssp TTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSSCCHHHHHHHTTSCCCGGG
T ss_pred ccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCccccccccccccccccccccccc
Confidence 566788889987 7899999997 788999999999999999863 46555422110 01100 1356 676
Q ss_pred CCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 114 SPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 114 ~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
.+ |+.|+++|+++++ +|+++.++++.+ ++++
T Consensus 98 ~~-g~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 128 (413)
T 2z36_A 98 MD-GAEHSAARRPVIG-EFTVKRLAALRP-RIQD 128 (413)
T ss_dssp CC-HHHHHHHHHHHHG-GGSHHHHHHHHH-HHHH
T ss_pred cC-chHHHHHHHHHHH-hhCHHHHHHHHH-HHHH
Confidence 66 9999999999999 899999999998 7764
No 55
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=99.29 E-value=5.2e-12 Score=90.49 Aligned_cols=97 Identities=13% Similarity=0.132 Sum_probs=73.0
Q ss_pred cCchHHHHHHHHhhcCCeeEEEcCC--ccEEEecCHHHHHHHHhhCCCCCCCCCchhh----hhhhccC-CCceEeCCCC
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNLGT--RRVLLLSSPSAVEECFTKSDVVFANRPRILL----GEHLGYN-STSLVWSPYG 117 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~~~--~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~g 117 (148)
++.++..+++++ +||+++++.+++ .+.+++++++.+++|+.+. .|.+++.... ....... +.++++.+ |
T Consensus 26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g 101 (411)
T 2dkk_A 26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGSLAFAD-Q 101 (411)
T ss_dssp SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTCSTTCC-T
T ss_pred cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccccccCC-c
Confidence 455668888887 799999998754 7899999999999999763 5655443210 1111101 35677666 9
Q ss_pred chHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 118 SHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 118 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
+.|+++|+++++ +|+++.++.+.+ .+++
T Consensus 102 ~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 129 (411)
T 2dkk_A 102 PDHNRLRRAVAG-AFTVGATKRLRP-RAQE 129 (411)
T ss_dssp THHHHHHHHHGG-GSSHHHHHHHHH-HHHH
T ss_pred hHHHHHHHHhhH-hhCHHHHHHHHH-HHHH
Confidence 999999999999 899999999998 7654
No 56
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=99.27 E-value=3e-12 Score=92.33 Aligned_cols=97 Identities=14% Similarity=0.156 Sum_probs=74.3
Q ss_pred CchHHHHHHHHhhcCCeeEEEcC-------CccEEEecCHHHHHHHHhhCCCCCCCCCch--h-hhhhhccCCCceEeCC
Q 043622 46 KPLHRTLSQLSSKHGPILLLNLG-------TRRVLLLSSPSAVEECFTKSDVVFANRPRI--L-LGEHLGYNSTSLVWSP 115 (148)
Q Consensus 46 ~~~~~~~~~~~~~yg~v~~~~~~-------~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 115 (148)
.+++..+.+++ +||+|+++.++ +.+.++++||+.+++|+.++ ..|.+++.. . ....+...+.++++.+
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~d 121 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVLD 121 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGCC
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccCC
Confidence 45777888885 68999999886 67899999999999999875 467766531 1 1111111125777777
Q ss_pred CCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 116 YGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 116 ~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
|+.|+++|+++++ +|+++.++.+.+ .+++
T Consensus 122 -g~~h~~~R~~l~~-~fs~~~l~~~~~-~i~~ 150 (435)
T 2wm5_A 122 -DPRHQRLRSIVSR-AFTPKVVARIEA-AVRD 150 (435)
T ss_dssp -TTHHHHHHHHHHH-TCCHHHHHHHHH-HHHH
T ss_pred -cHHHHHHHHHhHH-hhCHHHHHHHHH-HHHH
Confidence 9999999999999 899999999998 7754
No 57
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.26 E-value=1e-11 Score=88.94 Aligned_cols=97 Identities=19% Similarity=0.246 Sum_probs=73.9
Q ss_pred cCchHHHHHHHHhhcCCeeEEEc-CCccEEEecCHHHHHHHHhhCCCCCCCCC-chhhh---h------hhc-cC-CCce
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNL-GTRRVLLLSSPSAVEECFTKSDVVFANRP-RILLG---E------HLG-YN-STSL 111 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~-~~~~~---~------~~~-~~-~~~~ 111 (148)
..+++..+.++ ++||+++++++ ++.++++++||+.+++|+.++. +.+++ ..... . ..+ .. +.++
T Consensus 16 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 92 (411)
T 1gwi_A 16 VTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGRSM 92 (411)
T ss_dssp CSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCSSG
T ss_pred cCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhcccccc
Confidence 56788899999 99999999997 8889999999999999998653 33333 11100 0 000 01 2567
Q ss_pred EeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 112 VWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 112 ~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
++.+ |+.|+++|+++++ +|+++.++++.+ .+++
T Consensus 93 ~~~~-g~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 125 (411)
T 1gwi_A 93 LTVD-GAEHRRLRTLVAQ-ALTVRRVEHMRG-RITE 125 (411)
T ss_dssp GGCC-HHHHHHHHHHHTT-TSCHHHHHTTHH-HHHH
T ss_pred ccCC-cHHHHHHHHHHHH-hcCHHHHHHHHH-HHHH
Confidence 6666 9999999999999 899999999998 7754
No 58
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=99.23 E-value=7.6e-12 Score=89.97 Aligned_cols=97 Identities=13% Similarity=0.079 Sum_probs=73.4
Q ss_pred cCchHHHHHHHHhhcCCeeEEEcC--CccEEEecCHHHHHHHHhhCCCCCCCCCch--------h-hhh-----hhccCC
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNLG--TRRVLLLSSPSAVEECFTKSDVVFANRPRI--------L-LGE-----HLGYNS 108 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~~--~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~--------~-~~~-----~~~~~~ 108 (148)
..+++..+.++++ ||+++++.+| +.++++++|++.+++|+.++ .|.+++.. . ... .....+
T Consensus 19 ~~~p~~~~~~l~~-~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (425)
T 2z3t_A 19 IADPYPVYRRYRE-AAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE 95 (425)
T ss_dssp HHCCHHHHHHHHH-HCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT
T ss_pred hcChHHHHHHHHh-cCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc
Confidence 3456778888864 9999999887 77899999999999999864 57665431 0 000 011112
Q ss_pred CceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 109 TSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 109 ~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
.++++++ |+.|+++|+++++ +|+++.++.+.+ .+++
T Consensus 96 ~~l~~~d-g~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 131 (425)
T 2z3t_A 96 NWLVFLD-PPHHTELRSLLTT-EFSPSIVTGLRP-RIAE 131 (425)
T ss_dssp TCGGGCC-HHHHHHHHHHHHG-GGSHHHHHHHHH-HHHH
T ss_pred cccccCC-chHHHHHHHHHHH-hhCHHHHHHHHH-HHHH
Confidence 5777777 9999999999999 899999999998 7754
No 59
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=99.23 E-value=5.2e-12 Score=89.89 Aligned_cols=97 Identities=7% Similarity=-0.013 Sum_probs=74.1
Q ss_pred cCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchhhhhhhccCCCceEeCCCCchHHHHH
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRILLGEHLGYNSTSLVWSPYGSHWRNLR 124 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 124 (148)
..+++..+.+++++ |+++++..++ +.++++||+.+++++.+. ..|.+++...........+.+++..+ |+.|+++|
T Consensus 23 ~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~h~~~R 98 (396)
T 3oft_A 23 EQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQFIPLQQD-GAEHKAFR 98 (396)
T ss_dssp TTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHCCTTTTCC-HHHHHHHH
T ss_pred hcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCccccccccCccccC-CcHHHHHH
Confidence 46789999999999 9999998774 588899999999999754 46766653211111111124556566 99999999
Q ss_pred hhhhhhcCChhhHhhhhhhhhhc
Q 043622 125 KLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 125 ~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
+++++ +|+++.++++.+ .+++
T Consensus 99 ~~~~~-~f~~~~l~~~~~-~i~~ 119 (396)
T 3oft_A 99 TPVMK-GLASRFVVALEP-KVQA 119 (396)
T ss_dssp HHHHH-HTCHHHHHHHHH-HHHH
T ss_pred HHhhh-hhCHHHHHHHHH-HHHH
Confidence 99999 899999999998 7654
No 60
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=99.22 E-value=1.5e-11 Score=88.23 Aligned_cols=97 Identities=18% Similarity=0.211 Sum_probs=73.4
Q ss_pred CchHHHHHHHHhhcCCeeEEEcCC--ccEEEecCHHHHHHHHhhCCCCCCCCCchhhhhhhc---cC-CCceEeCCCCch
Q 043622 46 KPLHRTLSQLSSKHGPILLLNLGT--RRVLLLSSPSAVEECFTKSDVVFANRPRILLGEHLG---YN-STSLVWSPYGSH 119 (148)
Q Consensus 46 ~~~~~~~~~~~~~yg~v~~~~~~~--~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~g~~ 119 (148)
.+++..++++++ ||+|+++...| .+.+++++++.+++|+.+. ..|++++......... .. +.+++..+ |+.
T Consensus 37 ~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~ 113 (415)
T 3mgx_A 37 LERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSE-HEQ 113 (415)
T ss_dssp TTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCC-HHH
T ss_pred CChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccC-cHH
Confidence 468889999987 99999986445 7899999999999999643 4566655432211110 11 35566666 999
Q ss_pred HHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 120 WRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 120 w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
|+++|+++++ +|+++.++++.+ .+++
T Consensus 114 h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 139 (415)
T 3mgx_A 114 HRKLRKLVGP-LLSRAAARKLAE-RVRI 139 (415)
T ss_dssp HHHHHHHHGG-GSSHHHHHHSHH-HHHH
T ss_pred HHHHHHHhHh-hhCHHHHHHHHH-HHHH
Confidence 9999999999 899999999998 7754
No 61
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=99.22 E-value=1.7e-11 Score=87.36 Aligned_cols=92 Identities=11% Similarity=0.090 Sum_probs=71.3
Q ss_pred cCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchhhhhhhccCCCceEeCCCCchHHHHH
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRILLGEHLGYNSTSLVWSPYGSHWRNLR 124 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 124 (148)
..+++..+.++++ ||+|+++. .+.++++|++.+++|+.++. .|.+++... .... .+.++++.+ |+.|+++|
T Consensus 17 ~~~p~~~~~~l~~-~Gpv~~~~---~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~-~~~~--~~~~l~~~~-g~~h~~~R 87 (398)
T 2xkr_A 17 SREARAAYRWMRA-NQPVFRDR---NGLAAASTYQAVIDAERQPE-LFSNAGGIR-PDQP--ALPMMIDMD-DPAHLLRR 87 (398)
T ss_dssp CTTHHHHHHHHHH-HCSEEECT---TCCEEECSHHHHHHHHTCTT-TEESTTCSS-TTSC--CCSSGGGCC-TTHHHHHH
T ss_pred ccChhHHHHHHHh-cCCeeecC---CCeEEEecHHHHHHHHhCcc-cccCccccC-Cccc--ccccccccC-chHHHHHH
Confidence 3567888999987 99998663 37899999999999997643 576665332 1111 235777777 99999999
Q ss_pred hhhhhhcCChhhHhhhhhhhhhc
Q 043622 125 KLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 125 ~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
+++++ +|+++.++.+.+ .+++
T Consensus 88 ~~~~~-~fs~~~l~~~~~-~i~~ 108 (398)
T 2xkr_A 88 KLVNA-GFTRKRVKDKEA-SIAA 108 (398)
T ss_dssp HHHGG-GSCHHHHHTTHH-HHHH
T ss_pred HHhhh-hhCHHHHHHHHH-HHHH
Confidence 99999 899999999998 7754
No 62
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=99.20 E-value=7.6e-12 Score=89.78 Aligned_cols=95 Identities=17% Similarity=0.180 Sum_probs=72.8
Q ss_pred cCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCc-----hh-h--hhhhccC-CCceEeCC
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPR-----IL-L--GEHLGYN-STSLVWSP 115 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~-----~~-~--~~~~~~~-~~~~~~~~ 115 (148)
..+++..+.++ ++||++++ . ++.+.++++|++.+++|+.++. |.+++. .. . ...+... +.++++.+
T Consensus 25 ~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 99 (419)
T 1q5d_A 25 AEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFGLP 99 (419)
T ss_dssp TTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTSC
T ss_pred hhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccccCC
Confidence 45678888888 78999999 5 6778999999999999998664 877752 11 1 0111100 25666666
Q ss_pred CCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 116 YGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 116 ~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
|+.|+++|+++++ +|+++.++.+.+ .+++
T Consensus 100 -g~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 128 (419)
T 1q5d_A 100 -PEDHARVRKLVNP-SFTSRAIDLLRA-EIQR 128 (419)
T ss_dssp -HHHHHHHHHHHGG-GGSHHHHGGGHH-HHHH
T ss_pred -chHHHHHHHHHHH-hcCHHHHHHHHH-HHHH
Confidence 9999999999999 899999999998 7754
No 63
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=99.20 E-value=1.2e-11 Score=89.59 Aligned_cols=95 Identities=20% Similarity=0.192 Sum_probs=72.4
Q ss_pred hHHHHHHHHhhcCCee--EEE-cCCccEEEecCHHHHHHHHhhCCCCCCCCCchhhhh----------hh-c--cCCCce
Q 043622 48 LHRTLSQLSSKHGPIL--LLN-LGTRRVLLLSSPSAVEECFTKSDVVFANRPRILLGE----------HL-G--YNSTSL 111 (148)
Q Consensus 48 ~~~~~~~~~~~yg~v~--~~~-~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~----------~~-~--~~~~~~ 111 (148)
++..++++ ++||+|+ ++. +++.+.+++++++++++|+.++ ..|++++...... .. + ..++++
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 67778888 6789999 887 6778999999999999999765 5676655432110 00 0 112466
Q ss_pred EeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 112 VWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 112 ~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
+..+ |+.|+++|+++++ +|+++.++++.+ .+++
T Consensus 125 ~~~d-g~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 157 (450)
T 3tkt_A 125 VQMD-APKHPKLRRLTQD-WFMPKNLARLDG-EIRK 157 (450)
T ss_dssp GGCC-TTHHHHHHHHHHT-TTSHHHHGGGHH-HHHH
T ss_pred ccCC-CHHHHHHHHHhhh-hhCHHHHHHHHH-HHHH
Confidence 7666 9999999999999 899999999998 7754
No 64
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=99.17 E-value=3.2e-11 Score=86.37 Aligned_cols=95 Identities=15% Similarity=0.215 Sum_probs=70.6
Q ss_pred cCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchhhhh-hh-------ccCCCceEeCCC
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRILLGE-HL-------GYNSTSLVWSPY 116 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~ 116 (148)
..+++..++++ ++||+|+++.++ .+++++++.+++|+.+. ..+.+++...... .. ...+.++++.+
T Consensus 28 ~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d- 101 (418)
T 3r9b_A 28 RADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLFLD- 101 (418)
T ss_dssp TTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGGCC-
T ss_pred ccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhhcC-
Confidence 56788888888 578999987655 89999999999999764 3344444322211 11 11235777777
Q ss_pred CchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 117 GSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 117 g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
|+.|+++|+++++ .|+++.++++.+ .+++
T Consensus 102 g~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 130 (418)
T 3r9b_A 102 PPDHTRLRGLVSK-AFAPRVIKRLEP-EITA 130 (418)
T ss_dssp TTHHHHHHHHHHG-GGSHHHHGGGHH-HHHH
T ss_pred CchHHHHHHHhhh-hhCHHHHHHHHH-HHHH
Confidence 9999999999999 899999999999 7754
No 65
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=99.15 E-value=1.1e-11 Score=89.46 Aligned_cols=94 Identities=17% Similarity=0.202 Sum_probs=61.1
Q ss_pred CchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchhhhhhhccCCCceEeCCCCchHHHHHh
Q 043622 46 KPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRILLGEHLGYNSTSLVWSPYGSHWRNLRK 125 (148)
Q Consensus 46 ~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~ 125 (148)
.+++..++++ ++||+|+++..++ .+++++++.+++|+.++.. |.+++........ .++.++++.+ |+.|+++|+
T Consensus 53 ~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~~-f~~~~~~~~~~~~-~~~~~l~~~d-g~~h~~~Rr 126 (441)
T 3nc3_A 53 NNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPDI-FTTKSLVERAEPV-MRGPVLAQMH-GKEHSAKRR 126 (441)
T ss_dssp HCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTTT-EECCCTTSCCCCS-CC--------------CCHH
T ss_pred cChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCccc-ccccccccccccc-cCCCccccCC-cHHHHHHHH
Confidence 4556667766 6899999987655 8999999999999987653 7665543222222 1223567666 999999999
Q ss_pred hhhhhcCChhhHhhhhhhhhhc
Q 043622 126 LLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 126 ~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
++++ +|+++.++.+.+ .+++
T Consensus 127 ~~~~-~fs~~~l~~~~~-~i~~ 146 (441)
T 3nc3_A 127 IVVR-SFIGDALDHLSP-LIKQ 146 (441)
T ss_dssp HHHH-HHHHTHHHHHHH-HHHH
T ss_pred HHHh-hcCHHHHHHHHH-HHHH
Confidence 9999 899999999998 7654
No 66
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=99.10 E-value=7.3e-11 Score=84.10 Aligned_cols=91 Identities=14% Similarity=0.158 Sum_probs=62.9
Q ss_pred HHHHHHhhcCCeeEEEcC-Cc---cEEEecCHHHHHHHHhhCCCCCCCCCc------h---hhhhhhccCCCceEeCCCC
Q 043622 51 TLSQLSSKHGPILLLNLG-TR---RVLLLSSPSAVEECFTKSDVVFANRPR------I---LLGEHLGYNSTSLVWSPYG 117 (148)
Q Consensus 51 ~~~~~~~~yg~v~~~~~~-~~---~~v~i~~p~~~~~i~~~~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~~g 117 (148)
.+.+|+++ |+++++.++ +. ++++++||+.+++|+..+. .|.+++. . ...... ..+.++++.+ |
T Consensus 18 ~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~-g 93 (398)
T 1lfk_A 18 PADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDHQ-QFSTRRRWDPRDEIGGKGIFRPR-ELVGNLMDYD-P 93 (398)
T ss_dssp ECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCTT-TEEECTTCCC--------------CCTTCGGGCC-T
T ss_pred hhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhCc-ccccccccccccccCCccccccc-ccccCccccC-C
Confidence 34457777 999998865 45 8999999999999993222 4555543 1 111111 1235777776 9
Q ss_pred chHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 118 SHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 118 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
+.|+++|+++++ .|+++.++.+.+ .+++
T Consensus 94 ~~~~~~R~~~~~-~fs~~~l~~~~~-~i~~ 121 (398)
T 1lfk_A 94 PEHTRLRRKLTP-GFTLRKMQRMAP-YIEQ 121 (398)
T ss_dssp THHHHHHHHHGG-GGCHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHh-hhCHHHHHHHHH-HHHH
Confidence 999999999999 899999999998 7754
No 67
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=99.09 E-value=1.1e-10 Score=82.35 Aligned_cols=90 Identities=17% Similarity=0.168 Sum_probs=66.7
Q ss_pred HHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCc-----hhhh--hh--hcc-CCCceEeCCCCc
Q 043622 49 HRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPR-----ILLG--EH--LGY-NSTSLVWSPYGS 118 (148)
Q Consensus 49 ~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~-----~~~~--~~--~~~-~~~~~~~~~~g~ 118 (148)
+..++++ ++||+++++ + +.+++++++.+++++.+. ..|.+++. .... .. .+. .+.++++.+ |+
T Consensus 2 ~~~~~~l-r~~Gpv~~~---g-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-g~ 74 (368)
T 1io7_A 2 YDWFSEM-RKKDPVYYD---G-NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSD-PP 74 (368)
T ss_dssp HHHHHHH-HHHCSEEEC---S-SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCC-TT
T ss_pred CHHHHHH-HhcCCeEeE---C-CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccCC-Ch
Confidence 3456677 589999987 3 588999999999999864 46777664 1100 01 111 115677777 99
Q ss_pred hHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 119 HWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 119 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
.|+++|+++++ +|+++.++.+.+ .+++
T Consensus 75 ~h~~~R~~~~~-~f~~~~~~~~~~-~i~~ 101 (368)
T 1io7_A 75 LHDELRSMSAD-IFSPQKLQTLET-FIRE 101 (368)
T ss_dssp HHHHHHGGGTT-TTCHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHh-hcCHHHHHHHHH-HHHH
Confidence 99999999999 899999999998 7754
No 68
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=99.08 E-value=4.7e-11 Score=85.05 Aligned_cols=93 Identities=15% Similarity=0.146 Sum_probs=68.6
Q ss_pred CchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchh-hh------hhhccCCCceEeCCCCc
Q 043622 46 KPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRIL-LG------EHLGYNSTSLVWSPYGS 118 (148)
Q Consensus 46 ~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~g~ 118 (148)
.+++..++++ ++||++++ . +.+.++++|++.+++|+.+ ..|.+++... .. ...+..+.++++.+ |+
T Consensus 13 ~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~ 85 (397)
T 3buj_A 13 RDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILFQD-EP 85 (397)
T ss_dssp HCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGGCC-TT
T ss_pred cCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccccccCC-ch
Confidence 4566777766 58999998 6 5789999999999999975 3565543221 00 01111036777777 99
Q ss_pred hHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 119 HWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 119 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
.|+++|+++++ +|+++.++.+.+ .+++
T Consensus 86 ~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 112 (397)
T 3buj_A 86 DHGRLRGVVGP-AFSPSALRRLEP-VIAG 112 (397)
T ss_dssp HHHHHHHHHGG-GSSTTTTGGGHH-HHHH
T ss_pred hHHHHHHHHHH-hcCHHHHHHHHH-HHHH
Confidence 99999999999 899999999998 7754
No 69
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=98.99 E-value=1.6e-10 Score=80.83 Aligned_cols=78 Identities=9% Similarity=0.157 Sum_probs=60.2
Q ss_pred hhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCc-hhhhhhhccCCCceEeCCCCchHHHHHhhhhhhcCChh
Q 043622 57 SKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPR-ILLGEHLGYNSTSLVWSPYGSHWRNLRKLLSHDILSNT 135 (148)
Q Consensus 57 ~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~ 135 (148)
++||+|+++ | .++++||+.+++|+.++ ..|.+++. ... .. .+.++++.+ |+.|+++|+++++ +|+++
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~-~~---~~~~l~~~~-g~~~~~~R~~~~~-~fs~~ 69 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYS-NA---GGISFITMD-NPEHKEFRDISAP-YFLPS 69 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC-------CCGGGGCC-HHHHHHHHHHHHH-HHSHH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCC-Cc---cccccccCC-chHHHHHHHHhhh-hcCHH
Confidence 579999876 3 89999999999999875 35766652 111 11 236777776 9999999999999 89999
Q ss_pred hHhhhhhhhhhc
Q 043622 136 SLQTLSCYIRKD 147 (148)
Q Consensus 136 ~l~~~~~~~~~~ 147 (148)
.++++.+ .+++
T Consensus 70 ~l~~~~~-~i~~ 80 (343)
T 2rfb_A 70 KINDYKD-FIEE 80 (343)
T ss_dssp HHGGGHH-HHHH
T ss_pred HHHHHHH-HHHH
Confidence 9999999 7754
No 70
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=98.99 E-value=1.2e-09 Score=78.63 Aligned_cols=98 Identities=13% Similarity=0.196 Sum_probs=72.1
Q ss_pred cCchHHHHHHHHhhcCCeeEEEc-CCccEEEecCHHHHHHHHhhCCCCCCCCCc---hhhhh------hhccCCCceEeC
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNL-GTRRVLLLSSPSAVEECFTKSDVVFANRPR---ILLGE------HLGYNSTSLVWS 114 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~---~~~~~------~~~~~~~~~~~~ 114 (148)
..+++..+++++++ |+|+++.. ++.+.+++++++.+++++.+. ..|++++. ..... .....+.+++..
T Consensus 37 ~~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 114 (426)
T 3rwl_A 37 NDSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAM 114 (426)
T ss_dssp TTCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCGGGC
T ss_pred cCCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCccccc
Confidence 34578889999887 99999876 456799999999999999765 34554431 11110 111223456666
Q ss_pred CCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 115 PYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 115 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
+ |+.|+++|+++++ .|+++.++.+.+ .+++
T Consensus 115 d-g~~h~~~R~~~~~-~fs~~~l~~~~~-~i~~ 144 (426)
T 3rwl_A 115 D-RPRHDEQRKAVSP-IVAPANLAALEG-TIRE 144 (426)
T ss_dssp C-TTHHHHHHHHHGG-GGCHHHHHHHHH-HHHH
T ss_pred C-chHHHHHHHHhhh-hhCHHHHHHHHH-HHHH
Confidence 6 9999999999999 899999999998 7654
No 71
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=98.97 E-value=7.3e-11 Score=84.10 Aligned_cols=93 Identities=13% Similarity=0.075 Sum_probs=68.8
Q ss_pred cCchHHHHHHHHhhcCCeeEEEc-CCccEEEecCHHHHHHHHhhCCCCCC-C-CCch--hhh---hhhccCCCceEeCCC
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNL-GTRRVLLLSSPSAVEECFTKSDVVFA-N-RPRI--LLG---EHLGYNSTSLVWSPY 116 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~-~-~~~~--~~~---~~~~~~~~~~~~~~~ 116 (148)
..+++..+.+| ++||+++++.+ ++.+.++++|++.+++++.++ .|. + ++.. ... ......+.+++++
T Consensus 15 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 89 (396)
T 1n40_A 15 GDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI-- 89 (396)
T ss_dssp SSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH--
T ss_pred ccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH--
Confidence 45678899999 99999999997 788999999999999999764 354 3 3321 100 0111012455543
Q ss_pred CchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 117 GSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 117 g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
.|+++|+++++ .|+++ ++++.+ .+++
T Consensus 90 --~h~~~R~~~~~-~fs~~-~~~~~~-~i~~ 115 (396)
T 1n40_A 90 --ADAGLRKAVMK-AITPK-APGLEQ-FLRD 115 (396)
T ss_dssp --HHTTCHHHHHH-HTSSC-STTHHH-HHHH
T ss_pred --HHHHHHHHHHH-hhChH-HHHhHH-HHHH
Confidence 89999999999 89999 999988 7654
No 72
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=98.95 E-value=6.9e-10 Score=78.33 Aligned_cols=86 Identities=13% Similarity=0.119 Sum_probs=62.6
Q ss_pred HHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCc-hh-hh-----h-hhccC---CCceEeCCCC
Q 043622 49 HRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPR-IL-LG-----E-HLGYN---STSLVWSPYG 117 (148)
Q Consensus 49 ~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~-~~-~~-----~-~~~~~---~~~~~~~~~g 117 (148)
+..++++ ++||+++++. | .+++++++.+++|+.++ ..|.+++. .. .. . .+ .+ ..++++.+ |
T Consensus 2 ~~~~~~l-r~~gpv~~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~d-g 73 (367)
T 3b4x_A 2 YDWFKQM-RKESPVYYDG--K--VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVF-FDIPTRYTMLTSD-P 73 (367)
T ss_dssp HHHHHHH-HHHCSEEECS--S--SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCC-CCCGGGSSGGGCC-T
T ss_pred CHHHHHH-HHcCCceeeC--C--EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccch-hhcccccccccCC-c
Confidence 3456666 4799999886 3 78999999999999865 36766632 11 11 1 11 12 26777777 9
Q ss_pred chHHHHHhhhhhhcCChhhHhhhhhhhhh
Q 043622 118 SHWRNLRKLLSHDILSNTSLQTLSCYIRK 146 (148)
Q Consensus 118 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~ 146 (148)
+.|+++|+++++ .|+++.++. + .++
T Consensus 74 ~~h~~~R~~~~~-~fs~~~l~~--~-~i~ 98 (367)
T 3b4x_A 74 PLHDELRNLTAD-AFNPSNLPV--D-FVR 98 (367)
T ss_dssp THHHHHHHTTGG-GGSGGGSCH--H-HHH
T ss_pred hhHHHHHHHHHH-hcCHhhhcc--h-HHH
Confidence 999999999999 899999887 5 544
No 73
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=98.81 E-value=1.4e-08 Score=72.69 Aligned_cols=107 Identities=14% Similarity=0.108 Sum_probs=71.6
Q ss_pred CCceeeec---chhcccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchh---hhhhh-
Q 043622 32 ALPIVGHL---YLIFKNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRIL---LGEHL- 104 (148)
Q Consensus 32 ~~p~~G~~---~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~---~~~~~- 104 (148)
++|.+|-- ..+ ..+++..++++++ +|+|++. .+....++++.+.+++|+.+.. .|++..... .....
T Consensus 19 ~~P~~~~dp~~~~~--~~dP~~~~~~lR~-~gPV~~~--~~~~~~~vt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~ 92 (412)
T 4dnj_A 19 GVPHLGIDPFALDY--FADPYPEQETLRE-AGPVVYL--DKWNVYGVARYAEVYAVLNDPL-TFCSSRGVGLSDFKKEKP 92 (412)
T ss_dssp TSCEECCCTTSHHH--HHSCHHHHHHHHH-HCSSEEE--TTTTEEEECSHHHHHHHHTCTT-TEESTTCSSSSCTTTSCC
T ss_pred CCCccCCCCCCHHH--HhCcHHHHHHHHh-cCCEEEE--CCCCEEEECCHHHHHHHHcCCc-cccCCCcccccccccccc
Confidence 56776632 233 4567778877765 6999754 4567888999999999997543 343221111 11111
Q ss_pred ccCCCceEeCCCCchHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 105 GYNSTSLVWSPYGSHWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 105 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
......++..+ |+.|+++|+++++ +|+++.++++.+ .+++
T Consensus 93 ~~~~~~~~~~D-g~~H~r~R~~~~~-~Fs~~~l~~~~~-~i~~ 132 (412)
T 4dnj_A 93 WRPPSLILEAD-PPAHTRTRAVLSK-VLSPATMKRLRD-GFAA 132 (412)
T ss_dssp SSCCCTTTTCC-TTHHHHHHHHHHH-HTCHHHHHHHHH-HHHH
T ss_pred ccCCCccccCC-hHHHHHHHhhccc-ccCHHHHHHhhH-HHHH
Confidence 11223455556 9999999999999 899999999998 7653
No 74
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=98.76 E-value=1.1e-09 Score=78.50 Aligned_cols=94 Identities=11% Similarity=0.048 Sum_probs=65.7
Q ss_pred CchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCch-h-hhh-----hhccCCCceEeCCCCc
Q 043622 46 KPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRI-L-LGE-----HLGYNSTSLVWSPYGS 118 (148)
Q Consensus 46 ~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~-~-~~~-----~~~~~~~~~~~~~~g~ 118 (148)
.+++.. ++.++||+++.+..+... +++++++.+++|+.++. +...... . ... .....+++++..+ |+
T Consensus 33 ~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~ 106 (416)
T 3p3o_A 33 NFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFLQSLD-GA 106 (416)
T ss_dssp TCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSGGGCC-HH
T ss_pred cCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCccccCC-ch
Confidence 445555 555679999988876656 89999999999998754 3222110 0 000 0000124666666 99
Q ss_pred hHHHHHhhhhhhcCChhhHhhhhhhhhhc
Q 043622 119 HWRNLRKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 119 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
.|+++||++++ +|+++.++.+.+ .+++
T Consensus 107 ~h~~~Rr~~~~-~fs~~~l~~~~~-~i~~ 133 (416)
T 3p3o_A 107 DHRRLRGLATH-PFTPRRITAVQP-FVRS 133 (416)
T ss_dssp HHHHHHHTTCG-GGSHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHH-hhCHHHHHHHHH-HHHH
Confidence 99999999999 899999999999 7754
No 75
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=98.72 E-value=7.6e-09 Score=73.67 Aligned_cols=93 Identities=14% Similarity=0.109 Sum_probs=65.0
Q ss_pred CchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchhhhhhhccCCCceEeCCCCchHHHHHh
Q 043622 46 KPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRILLGEHLGYNSTSLVWSPYGSHWRNLRK 125 (148)
Q Consensus 46 ~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~ 125 (148)
.+++..+++++++ |+++++..+ .+++++++.+++++.+. .|..++...........+++++..+ |+.|+++|+
T Consensus 20 ~dp~~~~~~lr~~-~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~ 92 (394)
T 2wiy_A 20 NNPYPWYRRLQQD-HPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASDTALGSD-PPHHTVLRR 92 (394)
T ss_dssp HCCHHHHHHHHHH-CSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGGSGGGCC-TTHHHHHHH
T ss_pred cCccHHHHHHHhc-CCeEEecCC---eEEEcCHHHHHHHHcCC--CccccccccccccchhcccccccCC-chHHHHHHH
Confidence 3567778888665 899876532 68899999999999653 3543322111111111125666666 999999999
Q ss_pred hhhhhcCChhhHhhhhhhhhhc
Q 043622 126 LLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 126 ~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
++++ .|+++.++.+.+ .+++
T Consensus 93 ~~~~-~fs~~~~~~~~~-~i~~ 112 (394)
T 2wiy_A 93 QTNK-WFTPKLVDGWVR-TTRE 112 (394)
T ss_dssp HHHT-TCSHHHHHHHTH-HHHH
T ss_pred HHHh-ccCHHHHHHHHH-HHHH
Confidence 9999 899999999998 7654
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=98.25 E-value=2e-06 Score=61.76 Aligned_cols=98 Identities=10% Similarity=0.080 Sum_probs=63.0
Q ss_pred cCchHHHHHHHHhhcC-CeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchhhhhhhccCCCceEeCCCCchHHHH
Q 043622 45 NKPLHRTLSQLSSKHG-PILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRILLGEHLGYNSTSLVWSPYGSHWRNL 123 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg-~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~ 123 (148)
..+++..++++++..+ +++....++ ..-+++..+.+++|+.+. ..|+++................+..+ +++|+++
T Consensus 36 ~~~~~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~D-~p~H~r~ 112 (417)
T 4dxy_A 36 EDGYHEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYSDP-TRFSSEVIFLPKEAGEKAQMVPTKMD-PPEHTPY 112 (417)
T ss_dssp GGCHHHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCT-TTEESSCCSSSTTSSCSSCTTTTTCC-TTTHHHH
T ss_pred hcChHHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHcCc-hhccCCCcccccccccccccCcccCC-cHHHHHH
Confidence 3456777788777654 444443333 445678999999999754 34554332211111111112334445 9999999
Q ss_pred HhhhhhhcCChhhHhhhhhhhhhc
Q 043622 124 RKLLSHDILSNTSLQTLSCYIRKD 147 (148)
Q Consensus 124 R~~~~~~~f~~~~l~~~~~~~~~~ 147 (148)
|+++++ +|++++++++.+ .+++
T Consensus 113 Rrll~~-~Fs~~~l~~~~~-~i~~ 134 (417)
T 4dxy_A 113 RKALDK-GLNLAKIRKVED-KVRE 134 (417)
T ss_dssp HHHHHH-HHCHHHHHTTHH-HHHH
T ss_pred HHHhhh-hcCHHHHHHHHH-HHHH
Confidence 999999 899999999998 7653
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=94.81 E-value=0.0027 Score=45.07 Aligned_cols=91 Identities=5% Similarity=0.125 Sum_probs=58.5
Q ss_pred CCCC-CCCCCceeeecchhc---ccCchHHHHHHHHhhcCCeeEEEcCCccEEEecCHHHHHHHHhhCCCCCCCCCchh-
Q 043622 25 LPPN-PFPALPIVGHLYLIF---KNKPLHRTLSQLSSKHGPILLLNLGTRRVLLLSSPSAVEECFTKSDVVFANRPRIL- 99 (148)
Q Consensus 25 ~ppg-p~~~~p~~G~~~~~~---~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~- 99 (148)
.||| ++ ++|++|+...+. ...+++..+++++++ ++++.. .+.+++++++.+++|+.+. .|.+++...
T Consensus 35 ~ppG~~~-~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~ 106 (381)
T 2yjn_B 35 MIRGLHW-GYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDDP--AFTRATGRTP 106 (381)
T ss_dssp HHHHHHH-HHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCC
T ss_pred CCCcccc-cccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCccccc
Confidence 4556 44 468889765431 145788899999877 888753 4688999999999999863 465543210
Q ss_pred -hh-----hhhccCCCceEeCCCCchHHHHHhhhhhhcCC
Q 043622 100 -LG-----EHLGYNSTSLVWSPYGSHWRNLRKLLSHDILS 133 (148)
Q Consensus 100 -~~-----~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~ 133 (148)
.. ..... +.++++.+ |+.| ++ +|+
T Consensus 107 ~~~~~~~~~~~~~-~~~l~~~d-g~~H-------~~-~Ft 136 (381)
T 2yjn_B 107 EWMRAAGAPPAEW-AQPFRDVH-AASW-------EG-EVP 136 (381)
T ss_dssp HHHHHHTCCHHHH-THHHHHHH-HCCC-------CS-CCC
T ss_pred ccccccccccchh-hhhhhhCC-chhh-------hh-ccC
Confidence 00 01111 24666667 8999 56 676
No 78
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.45 E-value=10 Score=21.23 Aligned_cols=61 Identities=18% Similarity=0.201 Sum_probs=41.4
Q ss_pred eeeecchhcccCchHHHHHHHHhhcC-CeeEEEcCCccEEEecCHHHHHHHHhh-CCCCCCCCC
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHG-PILLLNLGTRRVLLLSSPSAVEECFTK-SDVVFANRP 96 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg-~v~~~~~~~~~~v~i~~p~~~~~i~~~-~~~~~~~~~ 96 (148)
.++|+..-.........+.++..+|| +|..+ .+|.-.|...+.+.++..+.. ++..+..++
T Consensus 13 YV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~ 75 (96)
T 2diu_A 13 YVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNR 75 (96)
T ss_dssp EEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSC
T ss_pred EEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCce
Confidence 37888765312233456889999995 88887 568888999999998877753 333333333
No 79
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=66.40 E-value=15 Score=20.47 Aligned_cols=54 Identities=6% Similarity=0.107 Sum_probs=35.8
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcC--------CccEEEecCHHHHHHHHhhCCCCC
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG--------TRRVLLLSSPSAVEECFTKSDVVF 92 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~--------~~~~v~i~~p~~~~~i~~~~~~~~ 92 (148)
++|++..- --.+.+.+..++||+|..+.+. |.-.|...+++.++.++..+...+
T Consensus 15 fV~~Lp~~----~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~~~~~ 76 (103)
T 1s79_A 15 YIKGFPTD----ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPGQKY 76 (103)
T ss_dssp EEECCCTT----CCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSSCCCC
T ss_pred EEECCCCC----CCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcCCCEE
Confidence 55666432 2346788899999998777653 234566778999888886444333
No 80
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=60.60 E-value=20 Score=20.02 Aligned_cols=57 Identities=16% Similarity=0.233 Sum_probs=37.2
Q ss_pred CCCCCCCCCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcC------CccEEEecCHHHHHHHHh
Q 043622 25 LPPNPFPALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG------TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 25 ~ppgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~------~~~~v~i~~p~~~~~i~~ 86 (148)
.||.|. ..-++|++..- --...+.+..++||++..+.+. +.-.|...+++.+..++.
T Consensus 3 ~~~~~~-~~l~V~nlp~~----~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~ 65 (115)
T 3lqv_A 3 LPPEVN-RILYIRNLPYK----ITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD 65 (115)
T ss_dssp CCTTCC-SEEEEESCCTT----CCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred CCCCCC-CEEEEeCCCCC----CCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence 344444 44567776533 2345688899999998877651 234566778888877765
No 81
>3ctr_A Poly(A)-specific ribonuclease PARN; protein-RNA-complex, M7G-CAP, M7GTP, RNA recognition motif, RRM, cytoplasm, exonuclease, hydrolase, magnesium; HET: MGP; 2.10A {Homo sapiens}
Probab=53.34 E-value=14 Score=20.85 Aligned_cols=52 Identities=19% Similarity=0.159 Sum_probs=37.4
Q ss_pred cCchHHHHHHHHhhcCCeeEEEcCCc-cEEEecCHHHHHHHHhh--CCCCCCCCC
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNLGTR-RVLLLSSPSAVEECFTK--SDVVFANRP 96 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~~~~-~~v~i~~p~~~~~i~~~--~~~~~~~~~ 96 (148)
...-...+.++.+.||++.--|+-.. -.+++.+|+.+++++.. ....|.-+.
T Consensus 15 ~ewKt~Di~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~i~~~~~y~i~t 69 (101)
T 3ctr_A 15 KEWKTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVKIAVNTSKYAESYRIQT 69 (101)
T ss_dssp TTCCHHHHHHHTTTSEEEEEEEEETTEEEEEEEEECHHHHHHHHHTTCSSCCCCC
T ss_pred hhhhhHHHHHHHhccCCEEEEEEcCCeEEEEecCHHHHHHHHHhcccCCceEEEE
Confidence 44556789999999997777777654 46678899999999984 244454433
No 82
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=52.09 E-value=30 Score=19.52 Aligned_cols=42 Identities=24% Similarity=0.214 Sum_probs=33.4
Q ss_pred cCchHHHHHHHHhhcCCeeEEEcCCc-cEEEecCHHHHHHHHh
Q 043622 45 NKPLHRTLSQLSSKHGPILLLNLGTR-RVLLLSSPSAVEECFT 86 (148)
Q Consensus 45 ~~~~~~~~~~~~~~yg~v~~~~~~~~-~~v~i~~p~~~~~i~~ 86 (148)
...-...+.++.+.||.+.--|+-.. -.+++.+|+.+++++.
T Consensus 25 ~ewKt~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~ 67 (100)
T 1whv_A 25 KEWKTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVN 67 (100)
T ss_dssp TTCCHHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHH
T ss_pred hhhhhHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHH
Confidence 44566789999999998776676554 4667889999999997
No 83
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=51.47 E-value=22 Score=17.84 Aligned_cols=41 Identities=10% Similarity=0.137 Sum_probs=28.7
Q ss_pred hHHHHHHHHhhcCCeeEEEcC---------CccEEEecCHHHHHHHHhhC
Q 043622 48 LHRTLSQLSSKHGPILLLNLG---------TRRVLLLSSPSAVEECFTKS 88 (148)
Q Consensus 48 ~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~~p~~~~~i~~~~ 88 (148)
-.+.+.+..++||++..+.+. +.-.|...+++.++.++...
T Consensus 12 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~ 61 (75)
T 1iqt_A 12 PEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 61 (75)
T ss_dssp CHHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTS
T ss_pred CHHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhC
Confidence 346788888999998777653 12345667888888887643
No 84
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=48.73 E-value=38 Score=19.67 Aligned_cols=54 Identities=13% Similarity=0.239 Sum_probs=33.6
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcCCeeEEEcC------CccEEEecCHHHHHHHHhh
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG------TRRVLLLSSPSAVEECFTK 87 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~------~~~~v~i~~p~~~~~i~~~ 87 (148)
-++|++..-......-..+.+.+.+||+|..+.+. |.-.|...+++.+...+..
T Consensus 32 LfV~nL~~~~~e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~ 91 (127)
T 2a3j_A 32 VLITNINPEVPKEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEA 91 (127)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHH
Confidence 35677754320122233567889999999877653 2345667788887777653
No 85
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=47.58 E-value=38 Score=19.31 Aligned_cols=69 Identities=12% Similarity=0.134 Sum_probs=39.0
Q ss_pred CCCCCCCCCceeeecchhcc------cCchHHHHHHHHhhcCCeeEEEcC-----CccEEEecCHHHHHHHHhh-CCCCC
Q 043622 25 LPPNPFPALPIVGHLYLIFK------NKPLHRTLSQLSSKHGPILLLNLG-----TRRVLLLSSPSAVEECFTK-SDVVF 92 (148)
Q Consensus 25 ~ppgp~~~~p~~G~~~~~~~------~~~~~~~~~~~~~~yg~v~~~~~~-----~~~~v~i~~p~~~~~i~~~-~~~~~ 92 (148)
.+|.|. ..-++-|+..... .....+.+.+..++||.|..+.+. |.-.|-..+++.++..... ++..|
T Consensus 2 ~~p~ps-~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~lnG~~f 80 (114)
T 3s6e_A 2 VQPLAT-QCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWF 80 (114)
T ss_dssp CCCCCC-SEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHHHTTCEE
T ss_pred CCCCCC-cEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHHhCCCEE
Confidence 345555 5556666544320 122345667778899998877653 3345556677776666542 34444
Q ss_pred CC
Q 043622 93 AN 94 (148)
Q Consensus 93 ~~ 94 (148)
..
T Consensus 81 ~G 82 (114)
T 3s6e_A 81 AG 82 (114)
T ss_dssp TT
T ss_pred CC
Confidence 33
No 86
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=46.02 E-value=28 Score=17.46 Aligned_cols=42 Identities=12% Similarity=-0.033 Sum_probs=28.9
Q ss_pred hHHHHHHHHhhcCCeeEEEcCC---------ccEEEecCHHHHHHHHhhCC
Q 043622 48 LHRTLSQLSSKHGPILLLNLGT---------RRVLLLSSPSAVEECFTKSD 89 (148)
Q Consensus 48 ~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~~p~~~~~i~~~~~ 89 (148)
-.+.+.+..++||++..+.+.. .-.|...+++.++.++..+.
T Consensus 12 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~ 62 (75)
T 2mss_A 12 TVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHF 62 (75)
T ss_dssp CHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSSSC
T ss_pred CHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHCCC
Confidence 3457888999999987776532 23455678888888875433
No 87
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=45.34 E-value=31 Score=17.73 Aligned_cols=39 Identities=21% Similarity=0.174 Sum_probs=29.0
Q ss_pred hHHHHHHHHhhcCCeeEEEcC-------CccEEEecCHHHHHHHHh
Q 043622 48 LHRTLSQLSSKHGPILLLNLG-------TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 48 ~~~~~~~~~~~yg~v~~~~~~-------~~~~v~i~~p~~~~~i~~ 86 (148)
..+.+.+..++||++..+.+. |.-.|...+++.++.++.
T Consensus 20 t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~ 65 (81)
T 2krb_A 20 LKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVK 65 (81)
T ss_dssp HHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHT
T ss_pred HHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHH
Confidence 346788999999998887764 233556678888888775
No 88
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=44.37 E-value=39 Score=18.59 Aligned_cols=49 Identities=12% Similarity=0.084 Sum_probs=34.2
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcC--CccEEEecCHHHHHHHHhh
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG--TRRVLLLSSPSAVEECFTK 87 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~--~~~~v~i~~p~~~~~i~~~ 87 (148)
++|++.. .--.+.+.+..++||+|..+.+. +.-.|...+++.++.++..
T Consensus 19 ~V~nLp~----~~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 19 VVSGLPP----SGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEESCCS----SCCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC----CCCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 5566653 22456788999999998777653 4556667788888887763
No 89
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=42.98 E-value=38 Score=18.12 Aligned_cols=52 Identities=15% Similarity=0.248 Sum_probs=32.2
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcC------CccEEEecCHHHHHHHHh
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG------TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~------~~~~v~i~~p~~~~~i~~ 86 (148)
++|++..-.........+.+..++||+|..+.+. +.-.|...+++.++.++.
T Consensus 13 ~V~nL~~~~~~~~l~~~l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~ 70 (96)
T 2dgx_A 13 QVSNIDYRLSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVN 70 (96)
T ss_dssp EEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHH
T ss_pred EEECCCCCCCHHHHHHHHHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHH
Confidence 5677653320122223344899999998887764 233556678888877765
No 90
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=42.89 E-value=38 Score=17.99 Aligned_cols=47 Identities=11% Similarity=0.062 Sum_probs=32.4
Q ss_pred CceeeecchhcccCchHHHHHHHHhhcCCeeEEEcC----CccEEEecCHHHHHH
Q 043622 33 LPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG----TRRVLLLSSPSAVEE 83 (148)
Q Consensus 33 ~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~----~~~~v~i~~p~~~~~ 83 (148)
.-++|++..- --.+.+.+..++||+|..+.+. |.-.|...+++.++.
T Consensus 13 ~l~V~~Lp~~----~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~ 63 (89)
T 3d2w_A 13 KVFVGRCTED----MTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQS 63 (89)
T ss_dssp EEEEESCCTT----CCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHH
T ss_pred EEEEeCCCCC----CCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHH
Confidence 3466776533 2446788999999999888764 344566778887774
No 91
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=42.89 E-value=38 Score=18.00 Aligned_cols=53 Identities=17% Similarity=0.286 Sum_probs=33.8
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcCCeeEEEcC------CccEEEecCHHHHHHHHh
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG------TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~------~~~~v~i~~p~~~~~i~~ 86 (148)
-++|++..-.........+.+..++||++..+.+. +.-.|...+++.++.++.
T Consensus 11 l~V~nLp~~~~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~ 69 (97)
T 1nu4_A 11 IYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALR 69 (97)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHH
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHH
Confidence 35677654320122223455899999998887654 345666778888877775
No 92
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=42.78 E-value=36 Score=17.68 Aligned_cols=50 Identities=18% Similarity=0.262 Sum_probs=32.4
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcCCeeEEEcC-----C----ccEEEecCHHHHHHHHhh
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG-----T----RRVLLLSSPSAVEECFTK 87 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-----~----~~~v~i~~p~~~~~i~~~ 87 (148)
-++|++..- --...+.+..++||++..+.+. + .-.|...+++.++.++..
T Consensus 14 l~V~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 72 (87)
T 3s7r_A 14 MFVGGLSWD----TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 72 (87)
T ss_dssp EEEECCCTT----CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHS
T ss_pred EEEeCCCCC----CCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHh
Confidence 356776533 2446788889999998776542 1 134456688888877754
No 93
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=40.46 E-value=45 Score=18.22 Aligned_cols=52 Identities=17% Similarity=0.124 Sum_probs=34.1
Q ss_pred ceeeecchhcccCc---hHHHHHHHHhhcCCeeEEEcC-------CccEEEecCHHHHHHHHh
Q 043622 34 PIVGHLYLIFKNKP---LHRTLSQLSSKHGPILLLNLG-------TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 34 p~~G~~~~~~~~~~---~~~~~~~~~~~yg~v~~~~~~-------~~~~v~i~~p~~~~~i~~ 86 (148)
-++|++..-. ... ....+.+..++||+|..+.+. |.-.|...+++.++.++.
T Consensus 18 l~V~nLp~~~-~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~ 79 (105)
T 2nlw_A 18 IVVDNVPQVG-PDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVK 79 (105)
T ss_dssp EEEESCCCCC-TTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHH
T ss_pred EEEeCCCcch-hhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHH
Confidence 3667776432 111 457889999999999888764 233455667777776665
No 94
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=39.86 E-value=49 Score=18.48 Aligned_cols=57 Identities=12% Similarity=0.078 Sum_probs=37.2
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcCCeeEEEcC--CccEEEecCHHHHHHHHhh-CCCCCCC
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG--TRRVLLLSSPSAVEECFTK-SDVVFAN 94 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~--~~~~v~i~~p~~~~~i~~~-~~~~~~~ 94 (148)
-++||+..-. -.+.+.+++++||+|..+.+. +.-.|...+++.++.++.. +...+..
T Consensus 19 l~V~nLp~~~----t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 78 (115)
T 3beg_B 19 VVVSGLPPSG----SWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRS 78 (115)
T ss_dssp EEEEECCSSC----CTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCC
T ss_pred EEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 3567775332 335678889999998877764 4455667788888877763 3434433
No 95
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=36.08 E-value=54 Score=17.80 Aligned_cols=48 Identities=19% Similarity=0.086 Sum_probs=31.6
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcC-----Cc----cEEEecCHHHHHHHHh
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG-----TR----RVLLLSSPSAVEECFT 86 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-----~~----~~v~i~~p~~~~~i~~ 86 (148)
++||+..- --.+.+.++.++||+|..+.+. +. -.|...+++.++.++.
T Consensus 23 fV~nLp~~----~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~ 79 (99)
T 4fxv_A 23 IVNYLPQN----MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79 (99)
T ss_dssp EEESCCTT----CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHH
T ss_pred EEeCCCCC----CCHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHH
Confidence 55666533 2346788899999998776542 11 2455678888877765
No 96
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=35.92 E-value=59 Score=18.24 Aligned_cols=39 Identities=13% Similarity=0.124 Sum_probs=27.6
Q ss_pred hHHHHHHHHhhcCCeeEEEcC---------CccEEEecCHHHHHHHHh
Q 043622 48 LHRTLSQLSSKHGPILLLNLG---------TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 48 ~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~~p~~~~~i~~ 86 (148)
-.+.+.++.++||+|..+.+. +.-.|...+.+.++.++.
T Consensus 49 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 96 (124)
T 2jwn_A 49 TAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVA 96 (124)
T ss_dssp CHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHh
Confidence 346788999999998766542 123456778888888873
No 97
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=35.15 E-value=49 Score=17.02 Aligned_cols=50 Identities=20% Similarity=0.107 Sum_probs=32.2
Q ss_pred CceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCC---------ccEEEecCHHHHHHHHh
Q 043622 33 LPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGT---------RRVLLLSSPSAVEECFT 86 (148)
Q Consensus 33 ~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~~p~~~~~i~~ 86 (148)
.-++|++..- --.+.+.+..++||++..+.+.. .-.|...+++.++.++.
T Consensus 7 ~l~v~nlp~~----~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 7 GLYIRGLQPG----TTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp EEEEESCCTT----CCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCCC----CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 3356776532 23456888889999987766421 23456678888777765
No 98
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=34.68 E-value=81 Score=19.66 Aligned_cols=40 Identities=8% Similarity=0.174 Sum_probs=28.6
Q ss_pred hHHHHHHHHhhcCCeeEEEcC--------CccEEEecCHHHHHHHHhh
Q 043622 48 LHRTLSQLSSKHGPILLLNLG--------TRRVLLLSSPSAVEECFTK 87 (148)
Q Consensus 48 ~~~~~~~~~~~yg~v~~~~~~--------~~~~v~i~~p~~~~~i~~~ 87 (148)
-...+.++..+||+|..+.+. |.-.|...+++.++.++..
T Consensus 122 t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~ 169 (193)
T 2voo_A 122 TLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVET 169 (193)
T ss_dssp CHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHC
T ss_pred CHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHh
Confidence 457889999999988766542 2334556788888888754
No 99
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=33.25 E-value=67 Score=18.06 Aligned_cols=55 Identities=7% Similarity=0.032 Sum_probs=36.0
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcC---------CccEEEecCHHHHHHHHhh-CCCCCC
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG---------TRRVLLLSSPSAVEECFTK-SDVVFA 93 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~~p~~~~~i~~~-~~~~~~ 93 (148)
+++++..- --.+.+.++.++||+|..+.+. +.-.|...+++.++.++.. +...+.
T Consensus 26 ~V~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~ 90 (126)
T 3ex7_B 26 FVTGVHEE----ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLM 90 (126)
T ss_dssp EEESCCTT----CCHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBSS
T ss_pred EEeCCCCC----CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCeeC
Confidence 45665432 2346788899999999887763 2335667788888888753 444443
No 100
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Probab=31.60 E-value=1.1e+02 Score=21.95 Aligned_cols=51 Identities=10% Similarity=0.101 Sum_probs=33.5
Q ss_pred CceeeecchhcccCchHHHHHHHHhhcCCeeEEEcC---------CccEEEecCHHHHHHHHhh
Q 043622 33 LPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG---------TRRVLLLSSPSAVEECFTK 87 (148)
Q Consensus 33 ~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~~p~~~~~i~~~ 87 (148)
.-++||+..- --...+.+++.+||.|..+.+. +.-.|...+++.+..++..
T Consensus 104 ~lfV~nL~~~----~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~ 163 (437)
T 3pgw_S 104 TLFVARVNYD----TTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163 (437)
T ss_pred EEEEeCCCCC----CCHHHHHHHHHHcCCeeEEEeeccCCCCCccceEEEeeccHHHHHHHHHH
Confidence 3466776432 2345788899999998777652 2245566788888777743
No 101
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.12 E-value=64 Score=17.16 Aligned_cols=39 Identities=13% Similarity=0.159 Sum_probs=28.3
Q ss_pred HHHHHHHHhhcCCeeEEEcC---CccEEEecCHHHHHHHHhh
Q 043622 49 HRTLSQLSSKHGPILLLNLG---TRRVLLLSSPSAVEECFTK 87 (148)
Q Consensus 49 ~~~~~~~~~~yg~v~~~~~~---~~~~v~i~~p~~~~~i~~~ 87 (148)
.+.+.++.++||+|..+.+. +.-.|...+++.+..++..
T Consensus 27 ~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 27 PTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp HHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 45788899999998887764 2334556788888877753
No 102
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.01 E-value=74 Score=17.84 Aligned_cols=50 Identities=10% Similarity=0.077 Sum_probs=33.7
Q ss_pred CceeeecchhcccCchHHHHHHHHhhcCCeeEEEcC---CccEEEecCHHHHHHHHh
Q 043622 33 LPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG---TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 33 ~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---~~~~v~i~~p~~~~~i~~ 86 (148)
.-++||+..- ---+.+.++.++||+|..+.+. +.-.|-..+++.++..+.
T Consensus 18 ~LfV~nLp~~----vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 18 VIHIRKLPID----VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp EEEECSCCTT----SCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC----CCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 3456776532 2345788999999998877653 334566778887777765
No 103
>2cqb_A Peptidyl-prolyl CIS-trans isomerase E; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.64 E-value=66 Score=17.20 Aligned_cols=50 Identities=12% Similarity=0.024 Sum_probs=32.9
Q ss_pred CceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCC---------ccEEEecCHHHHHHHHh
Q 043622 33 LPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGT---------RRVLLLSSPSAVEECFT 86 (148)
Q Consensus 33 ~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~~p~~~~~i~~ 86 (148)
.-++|++..- --.+.+.++.++||+|..+.+.. .-.|...+++.++.++.
T Consensus 14 ~l~V~nLp~~----~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 72 (102)
T 2cqb_A 14 VLYVGGLAEE----VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAID 72 (102)
T ss_dssp CEEEESCCSS----CCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHH
T ss_pred EEEEeCCCCC----CCHHHHHHHhhccCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHH
Confidence 3456776533 23467889999999887776522 22445668888887774
No 104
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=30.47 E-value=68 Score=17.27 Aligned_cols=49 Identities=16% Similarity=0.074 Sum_probs=32.9
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcCCeeEEEcC--------CccEEEecCHHHHHHHHh
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG--------TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~--------~~~~v~i~~p~~~~~i~~ 86 (148)
-++|++..- --.+.+.++.++||+|..+.+. +.-.|...+++.++.++.
T Consensus 18 l~v~nLp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~ 74 (105)
T 2dnh_A 18 LFVGMLNKQ----QSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIH 74 (105)
T ss_dssp EEEESCCTT----CCHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCCC----CCHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHH
Confidence 356776533 2346788899999998776643 223455678888888775
No 105
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=30.47 E-value=74 Score=17.69 Aligned_cols=50 Identities=18% Similarity=0.124 Sum_probs=33.4
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCC-------ccEEEecCHHHHHHHHhh
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGT-------RRVLLLSSPSAVEECFTK 87 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~-------~~~v~i~~p~~~~~i~~~ 87 (148)
-++|++..- --.+.+.+..++||+|..+.+.. .-.|...+++.++.++..
T Consensus 8 lfV~nLp~~----~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 8 IFIKNLDKS----IDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEEESCCTT----CCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEECCCCCC----CCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 356776533 23467888999999987665421 235667789888887753
No 106
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=29.25 E-value=78 Score=17.58 Aligned_cols=49 Identities=14% Similarity=0.094 Sum_probs=33.1
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcCCeeEEEcC-----C----ccEEEecCHHHHHHHHh
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG-----T----RRVLLLSSPSAVEECFT 86 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-----~----~~~v~i~~p~~~~~i~~ 86 (148)
-++|++..- --.+.+.+..++||+|..+.+. + .-.|...+++.++.++.
T Consensus 9 lfV~nL~~~----~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~ 66 (110)
T 3s8s_A 9 VTFARLNDN----VRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVK 66 (110)
T ss_dssp EEEESCCTT----CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH
T ss_pred EEEECCCCC----CCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHH
Confidence 356776533 2346788899999998777642 1 12566778888888775
No 107
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=28.68 E-value=73 Score=17.03 Aligned_cols=39 Identities=15% Similarity=0.177 Sum_probs=28.2
Q ss_pred hHHHHHHHHhhcCCeeEEEcC----CccEEEecCHHHHHHHHh
Q 043622 48 LHRTLSQLSSKHGPILLLNLG----TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 48 ~~~~~~~~~~~yg~v~~~~~~----~~~~v~i~~p~~~~~i~~ 86 (148)
-.+.+.+..++||++..+.+. +.-.|...+++.++.++.
T Consensus 13 t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~ 55 (101)
T 2hvz_A 13 GKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 55 (101)
T ss_dssp SHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHH
Confidence 345788899999998776652 334566778888888776
No 108
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=28.52 E-value=83 Score=17.66 Aligned_cols=49 Identities=12% Similarity=0.089 Sum_probs=34.0
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcC-CeeEEEcC-----CccEEEecCHHHHHHHHh
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHG-PILLLNLG-----TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg-~v~~~~~~-----~~~~v~i~~p~~~~~i~~ 86 (148)
-++||+.. .--.+.+.+..++|| ++..+.+. |.-.|...+++.++..+.
T Consensus 31 l~VgnLp~----~~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~ 85 (111)
T 2jvr_A 31 ITMKNLPE----GCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALE 85 (111)
T ss_dssp EEEECSSC----CCCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHH
T ss_pred EEEECCCC----CCCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHH
Confidence 35677653 224567889999999 78777663 344666778888887775
No 109
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.37 E-value=73 Score=16.97 Aligned_cols=50 Identities=16% Similarity=0.158 Sum_probs=33.1
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcCCeeEEEcC--------CccEEEecCHHHHHHHHhh
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG--------TRRVLLLSSPSAVEECFTK 87 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~--------~~~~v~i~~p~~~~~i~~~ 87 (148)
-+++++..- --.+.+.+..++||++..+.+. +.-.|...+++.++.++..
T Consensus 20 l~v~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 20 LFISGLPFS----CTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp EEEESCCTT----CCHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC----CCHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 356666532 2345788899999998776643 2235567788888887753
No 110
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.87 E-value=74 Score=16.90 Aligned_cols=55 Identities=11% Similarity=0.014 Sum_probs=35.9
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcCC---------ccEEEecCHHHHHHHHhhCCCCCC
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGT---------RRVLLLSSPSAVEECFTKSDVVFA 93 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~~p~~~~~i~~~~~~~~~ 93 (148)
++|++..- --.+.+.++.++||+|..+.+.. .-.|...+++.++.++..+...+.
T Consensus 14 ~V~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~~ 77 (99)
T 2dgs_A 14 FVGGIPHN----CGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIM 77 (99)
T ss_dssp EEESCCSS----CCHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBSS
T ss_pred EEeCCCCC----CCHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEEC
Confidence 55666432 24457888999999988776532 235567788888888764444443
No 111
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=27.68 E-value=83 Score=17.39 Aligned_cols=48 Identities=15% Similarity=0.208 Sum_probs=32.2
Q ss_pred hHHHHHHHHhhcCCeeEEEcCC---ccEEEecCHHHHHHHHhh-CCCCCCCC
Q 043622 48 LHRTLSQLSSKHGPILLLNLGT---RRVLLLSSPSAVEECFTK-SDVVFANR 95 (148)
Q Consensus 48 ~~~~~~~~~~~yg~v~~~~~~~---~~~v~i~~p~~~~~i~~~-~~~~~~~~ 95 (148)
-.+.+.+++++||+|..+.+.. .-.|...+++.++.++.. ++..+..+
T Consensus 23 te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~ 74 (111)
T 1whx_A 23 LAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHV 74 (111)
T ss_dssp CHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSS
T ss_pred CHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEECCe
Confidence 4567889999999998887632 345566788887777653 34444433
No 112
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.67 E-value=77 Score=16.99 Aligned_cols=48 Identities=10% Similarity=0.039 Sum_probs=32.5
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcC---------CccEEEecCHHHHHHHHh
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG---------TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~~p~~~~~i~~ 86 (148)
++|++..- --.+.+.++.++||+|..+.+. +.-.|...+++.++.++.
T Consensus 17 ~V~nLp~~----~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 73 (103)
T 2dnm_A 17 KVDNLTYR----TSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEA 73 (103)
T ss_dssp EEESCCTT----CCHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHH
T ss_pred EEeCCCCC----CCHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHH
Confidence 56666532 2346788899999998887763 223556677777777775
No 113
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=27.33 E-value=1.1e+02 Score=18.77 Aligned_cols=39 Identities=23% Similarity=0.245 Sum_probs=27.8
Q ss_pred hHHHHHHHHhhcCCeeEEEcCC-----ccEEEecCHHHHHHHHh
Q 043622 48 LHRTLSQLSSKHGPILLLNLGT-----RRVLLLSSPSAVEECFT 86 (148)
Q Consensus 48 ~~~~~~~~~~~yg~v~~~~~~~-----~~~v~i~~p~~~~~i~~ 86 (148)
-.+.+.+.+.+||+|..+.+.. .-.|-..|++.++....
T Consensus 59 ted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~ 102 (164)
T 1sjr_A 59 TLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 102 (164)
T ss_dssp CHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHH
Confidence 3467889999999987776532 24556678887776665
No 114
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=27.17 E-value=76 Score=16.78 Aligned_cols=50 Identities=16% Similarity=0.201 Sum_probs=33.4
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcCCeeEEEcC------------CccEEEecCHHHHHHHHhh
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG------------TRRVLLLSSPSAVEECFTK 87 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~------------~~~~v~i~~p~~~~~i~~~ 87 (148)
-++|++..- --.+.+.++.++||+|..+.+. +.-.|...+++.++.++..
T Consensus 8 l~V~nLp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 8 LFIKNLNFS----TTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp EEEESCCTT----CCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC----CCHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 356776533 2346788889999988766543 1234566788888888764
No 115
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=27.10 E-value=81 Score=17.87 Aligned_cols=38 Identities=13% Similarity=0.153 Sum_probs=27.1
Q ss_pred HHHHHHHHhhcCCeeEEEcC---CccEEEecCHHHHHHHHh
Q 043622 49 HRTLSQLSSKHGPILLLNLG---TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 49 ~~~~~~~~~~yg~v~~~~~~---~~~~v~i~~p~~~~~i~~ 86 (148)
.+.+.++.++||+|..+.+. +.-.|...+++.++.++.
T Consensus 51 e~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~ 91 (121)
T 2bz2_A 51 PTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVA 91 (121)
T ss_dssp HHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred HHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 46788999999988766553 334555678888777764
No 116
>1b35_D CRPV, protein (cricket paralysis virus, VP4); insect picorna-like virus, icosahedral virus; 2.40A {Cricket paralysis virus} SCOP: b.121.4.1
Probab=27.00 E-value=16 Score=17.58 Aligned_cols=11 Identities=18% Similarity=0.833 Sum_probs=7.9
Q ss_pred CCceeeecchh
Q 043622 32 ALPIVGHLYLI 42 (148)
Q Consensus 32 ~~p~~G~~~~~ 42 (148)
.+|++||.+.-
T Consensus 30 ~ipilgn~fs~ 40 (57)
T 1b35_D 30 HIPVLGNIFST 40 (57)
T ss_dssp CCCCSCCSSSS
T ss_pred ccccccccccc
Confidence 47888987643
No 117
>2cq0_A Eukaryotic translation initiation factor 3 subunit 4; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.96 E-value=80 Score=16.93 Aligned_cols=48 Identities=15% Similarity=0.098 Sum_probs=32.0
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcCC---------ccEEEecCHHHHHHHHh
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGT---------RRVLLLSSPSAVEECFT 86 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~~p~~~~~i~~ 86 (148)
++|++..- --.+.+.++.++||+|..+.+.. .-.|...+++.++.++.
T Consensus 19 ~V~nlp~~----~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 75 (103)
T 2cq0_A 19 RVTNLSED----TRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIA 75 (103)
T ss_dssp EEESCCTT----CCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHH
T ss_pred EEeCCCCC----CCHHHHHHHHHhCCCeEEEEEeecCCCCceeeEEEEEECCHHHHHHHHH
Confidence 55666432 23456888889999987766522 23456778888888876
No 118
>2cpz_A CUG triplet repeat RNA-binding protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2rq4_A 2rqc_A
Probab=26.69 E-value=86 Score=17.25 Aligned_cols=50 Identities=12% Similarity=0.061 Sum_probs=32.5
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCC---------ccEEEecCHHHHHHHHhh
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGT---------RRVLLLSSPSAVEECFTK 87 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~~p~~~~~i~~~ 87 (148)
-+++++..- --.+.+.++.++||+|..+.+.. .-.|...+++.++.++..
T Consensus 28 l~V~nLp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 86 (115)
T 2cpz_A 28 LFIYHLPQE----FGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQS 86 (115)
T ss_dssp EEEESCCSS----CCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHH
T ss_pred EEEeCCCCC----CCHHHHHHHHHhcCCeEEEEEEECCCCCCcCccEEEEECCHHHHHHHHHH
Confidence 356766533 23467889999999877665421 234556788888887743
No 119
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=26.57 E-value=88 Score=17.28 Aligned_cols=62 Identities=10% Similarity=0.028 Sum_probs=34.6
Q ss_pred CCceeeecchhc-ccCchHHHHHHHHhhcCCeeEEEcC----------CccEEEecCHHHHHHHHhh-CCCCCC
Q 043622 32 ALPIVGHLYLIF-KNKPLHRTLSQLSSKHGPILLLNLG----------TRRVLLLSSPSAVEECFTK-SDVVFA 93 (148)
Q Consensus 32 ~~p~~G~~~~~~-~~~~~~~~~~~~~~~yg~v~~~~~~----------~~~~v~i~~p~~~~~i~~~-~~~~~~ 93 (148)
..-++.|+..-. -.....+.+.+..++||.|..+.+. |.-.|...+++.+...... ++..|.
T Consensus 9 ~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~lnG~~~~ 82 (105)
T 2pe8_A 9 KVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFG 82 (105)
T ss_dssp SEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHHTTCEET
T ss_pred CEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHHCCCEEC
Confidence 444566664210 0233557888889999998776542 1123456688776666542 444443
No 120
>3fgx_A Rbstp2171; structural genomics, PSI-2, Pro structure initiative, midwest center for structural genomic structural genomics; 2.90A {Bacillus stearothermophilus}
Probab=26.29 E-value=42 Score=19.38 Aligned_cols=17 Identities=18% Similarity=0.366 Sum_probs=13.7
Q ss_pred HHHHHHhhcCCeeEEEc
Q 043622 51 TLSQLSSKHGPILLLNL 67 (148)
Q Consensus 51 ~~~~~~~~yg~v~~~~~ 67 (148)
.-+++.+|||.+|++.+
T Consensus 9 ~~~~lk~kygk~y~v~~ 25 (114)
T 3fgx_A 9 NTDELKQKYGRVYEIRI 25 (114)
T ss_dssp CHHHHHHHHSSEEEEEE
T ss_pred cHHHHHHHhCceEEEEe
Confidence 35678899999999865
No 121
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.24 E-value=87 Score=17.16 Aligned_cols=48 Identities=13% Similarity=0.106 Sum_probs=30.4
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcC-------CccEEEecCHHHHHHHHh
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG-------TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-------~~~~v~i~~p~~~~~i~~ 86 (148)
++|++..- --.+.+.+..++||+|..+.+. +.-.|...+++.++.++.
T Consensus 33 ~V~nLp~~----~te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~ 87 (109)
T 2err_A 33 HVSNIPFR----FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRARE 87 (109)
T ss_dssp EEESCCTT----CCHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHH
T ss_pred EEECCCCc----CCHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHH
Confidence 45655422 2346788999999988766653 223455667777777665
No 122
>2khc_A Testis-specific RNP-type RNA binding protein; RRM, RNA recognition motif, bruno; NMR {Drosophila melanogaster}
Probab=26.22 E-value=89 Score=17.25 Aligned_cols=39 Identities=8% Similarity=0.106 Sum_probs=27.3
Q ss_pred hHHHHHHHHhhcCCeeEEEcCC---------ccEEEecCHHHHHHHHh
Q 043622 48 LHRTLSQLSSKHGPILLLNLGT---------RRVLLLSSPSAVEECFT 86 (148)
Q Consensus 48 ~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~~p~~~~~i~~ 86 (148)
-.+.+.++.++||++..+.+.. .-.|...+++.++.++.
T Consensus 53 t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~ 100 (118)
T 2khc_A 53 TDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIK 100 (118)
T ss_dssp CHHHHHHHTTTSCEEEEEEECCCSSSSCCCCEEEEEEESSHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEEeCCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 3467888999999988776532 22455667777777775
No 123
>2dnr_A Synaptojanin-1; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.19 E-value=89 Score=17.20 Aligned_cols=43 Identities=14% Similarity=0.183 Sum_probs=29.5
Q ss_pred chHHHHHHHHhhcCCeeEEEcCCcc-EEEecCHHHHHHHHhhCC
Q 043622 47 PLHRTLSQLSSKHGPILLLNLGTRR-VLLLSSPSAVEECFTKSD 89 (148)
Q Consensus 47 ~~~~~~~~~~~~yg~v~~~~~~~~~-~v~i~~p~~~~~i~~~~~ 89 (148)
+....+.+....||.+..+++-... .|...|.+.+..+..-++
T Consensus 27 ~l~~~L~~~F~~~G~Vi~vr~~~d~~fVtF~d~~sAlaAi~mnG 70 (91)
T 2dnr_A 27 ALIDELLQQFASFGEVILIRFVEDKMWVTFLEGSSALNVLSLNG 70 (91)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECSSSEEEEESSHHHHHHGGGGTT
T ss_pred HHHHHHHHHHHhCCCeEEEEEecCCEEEEECChHHHHHHHhcCC
Confidence 3456788888889999888865544 445557777777665333
No 124
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.53 E-value=91 Score=17.11 Aligned_cols=38 Identities=13% Similarity=0.071 Sum_probs=25.8
Q ss_pred hHHHHHHHHhhcCCeeEEEcCC---------ccEEEecCHHHHHHHH
Q 043622 48 LHRTLSQLSSKHGPILLLNLGT---------RRVLLLSSPSAVEECF 85 (148)
Q Consensus 48 ~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~~p~~~~~i~ 85 (148)
-.+.+.++.++||.|..+.+.. .-.|...+++.++.++
T Consensus 38 t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~ 84 (114)
T 2cq4_A 38 RPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 84 (114)
T ss_dssp CHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHH
T ss_pred CHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHH
Confidence 3457888999999988877641 2344556776666666
No 125
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.52 E-value=92 Score=17.16 Aligned_cols=49 Identities=14% Similarity=0.159 Sum_probs=32.2
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcCC---------ccEEEecCHHHHHHHHhh
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGT---------RRVLLLSSPSAVEECFTK 87 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~~p~~~~~i~~~ 87 (148)
++|++..- --.+.+.++.++||+|..+.+.. .-.|...+++.++.++..
T Consensus 31 ~V~nLp~~----~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~ 88 (116)
T 1x4b_A 31 FIGGLSFE----TTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 88 (116)
T ss_dssp EEECCTTC----CCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTS
T ss_pred EEeCCCCC----CCHHHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHh
Confidence 45555422 23457888999999887665422 234566788888888865
No 126
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=25.29 E-value=93 Score=17.15 Aligned_cols=48 Identities=17% Similarity=0.224 Sum_probs=30.3
Q ss_pred hHHHHHHHHhhcCCeeEEEcCC-----------ccEEEecCHHHHHHHHhh-CCCCCCCC
Q 043622 48 LHRTLSQLSSKHGPILLLNLGT-----------RRVLLLSSPSAVEECFTK-SDVVFANR 95 (148)
Q Consensus 48 ~~~~~~~~~~~yg~v~~~~~~~-----------~~~v~i~~p~~~~~i~~~-~~~~~~~~ 95 (148)
..+.+.+..++||.|..+.+.. .-.|...+++.++..... ++..|..+
T Consensus 28 ~~~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lnG~~f~GR 87 (105)
T 3v4m_A 28 IVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANR 87 (105)
T ss_dssp HHHHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred HHHHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHHhCCCEeCCC
Confidence 3456778889999998887642 224556788777666542 34444433
No 127
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=25.26 E-value=96 Score=17.29 Aligned_cols=49 Identities=20% Similarity=0.273 Sum_probs=33.1
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcC--------CccEEEecCHHHHHHHHhh
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG--------TRRVLLLSSPSAVEECFTK 87 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~--------~~~~v~i~~p~~~~~i~~~ 87 (148)
++|++..- --.+.+.++.++||+|..+.+. +.-.|...+++.++.++..
T Consensus 11 ~V~nLp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~ 67 (116)
T 2fy1_A 11 FIGGLNRE----TNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKD 67 (116)
T ss_dssp EEECCTTT----CCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHH
T ss_pred EEeCCCCC----CCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHH
Confidence 55666432 2346788899999988776543 2335667788888888763
No 128
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=25.01 E-value=91 Score=16.94 Aligned_cols=48 Identities=8% Similarity=0.007 Sum_probs=32.7
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcC---------CccEEEecCHHHHHHHHh
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG---------TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~~p~~~~~i~~ 86 (148)
++|++..- --...+.+..++||++..+.+. +.-.|...+++.++.++.
T Consensus 30 ~V~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~ 86 (110)
T 1oo0_B 30 FVTSIHEE----AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKE 86 (110)
T ss_dssp EEESCCTT----CCHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHH
T ss_pred EEeCCCCC----CCHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHH
Confidence 45665432 2345788999999999887763 223556778888887775
No 129
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=24.78 E-value=1.1e+02 Score=17.89 Aligned_cols=48 Identities=25% Similarity=0.308 Sum_probs=30.9
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCc-----cEEEecCHHHHHHHHh
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTR-----RVLLLSSPSAVEECFT 86 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~-----~~v~i~~p~~~~~i~~ 86 (148)
.+||+.. .--.+.+.+.+.+||.|..+.+... -.|...+++.++....
T Consensus 32 ~V~NL~~----~vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~ 84 (130)
T 3zzy_A 32 IVENLFY----PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 84 (130)
T ss_dssp EEESCCS----CCCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHH
T ss_pred EECCCCC----CCCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHH
Confidence 3566642 2234578899999999877765332 4556677777666654
No 130
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.40 E-value=83 Score=16.26 Aligned_cols=46 Identities=11% Similarity=0.078 Sum_probs=31.3
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcC----CccEEEecCHHHHHHH
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG----TRRVLLLSSPSAVEEC 84 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~----~~~~v~i~~p~~~~~i 84 (148)
++|++..- --.+.+.+..++||+|..+.+. +.-.|...+++.++.+
T Consensus 9 ~V~nLp~~----~te~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~~ 58 (88)
T 1wf0_A 9 FVGRCTGD----MTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 58 (88)
T ss_dssp EEESCCSS----SCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHT
T ss_pred EEeCCCCC----CCHHHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHHH
Confidence 45666432 2346788899999998888764 3346667788877654
No 131
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=24.04 E-value=1.2e+02 Score=18.07 Aligned_cols=48 Identities=8% Similarity=0.007 Sum_probs=31.9
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcC---------CccEEEecCHHHHHHHHh
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG---------TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~~p~~~~~i~~ 86 (148)
++|++..- --...+.++..+||+|..+.+. +.-.|...+++.++.++.
T Consensus 76 ~V~nLp~~----~t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~ 132 (165)
T 1rk8_A 76 FVTSIHEE----AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKE 132 (165)
T ss_dssp EEESCCTT----CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHH
T ss_pred EEeCCCCC----CCHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHH
Confidence 45655432 2456788999999998776543 223555678888887775
No 132
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.95 E-value=87 Score=16.37 Aligned_cols=49 Identities=16% Similarity=0.123 Sum_probs=33.1
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCC---------ccEEEecCHHHHHHHHh
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGT---------RRVLLLSSPSAVEECFT 86 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~~p~~~~~i~~ 86 (148)
-+++++..- --.+.+.++.++||++..+.+.. .-.|...+++.++.++.
T Consensus 8 l~v~nlp~~----~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (95)
T 2dnz_A 8 LYVGSLHFN----ITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALE 65 (95)
T ss_dssp EEEESCCTT----CCHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHH
T ss_pred EEEeCCCCC----CCHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHH
Confidence 356666432 23457888999999987766522 23456778888888876
No 133
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.84 E-value=1e+02 Score=16.98 Aligned_cols=39 Identities=26% Similarity=0.291 Sum_probs=29.5
Q ss_pred HHHHHHHHhhcCCeeEEEcCC----ccEEEecCHHHHHHHHhh
Q 043622 49 HRTLSQLSSKHGPILLLNLGT----RRVLLLSSPSAVEECFTK 87 (148)
Q Consensus 49 ~~~~~~~~~~yg~v~~~~~~~----~~~v~i~~p~~~~~i~~~ 87 (148)
.+.+.+.+++||+|..+.+.+ .-.|...+++.+...+..
T Consensus 31 e~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~ 73 (100)
T 2d9o_A 31 KDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQN 73 (100)
T ss_dssp HHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHh
Confidence 568999999999988877632 335667788888888764
No 134
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=23.13 E-value=1e+02 Score=16.89 Aligned_cols=49 Identities=10% Similarity=0.143 Sum_probs=33.4
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcCC---------ccEEEecCHHHHHHHHhh
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGT---------RRVLLLSSPSAVEECFTK 87 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~~p~~~~~i~~~ 87 (148)
++|++..- --.+.+.+..++||++..+.+.. .-.|...+++.++.++..
T Consensus 29 fV~nLp~~----~te~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~ 86 (109)
T 2rs2_A 29 FIGGLSWQ----TTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 86 (109)
T ss_dssp EEESCCTT----CCHHHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHS
T ss_pred EEeCCCCC----CCHHHHHHHHHccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 55666432 23457888999999988776532 235667788888888764
No 135
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=23.03 E-value=98 Score=16.62 Aligned_cols=48 Identities=8% Similarity=0.059 Sum_probs=31.9
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcC---------CccEEEecCHHHHHHHHh
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG---------TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~~p~~~~~i~~ 86 (148)
++|++..- --.+.+.+..++||+|..+.+. +.-.|...+++.++.++.
T Consensus 27 ~V~nlp~~----~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 83 (106)
T 1p27_B 27 FVTGVHEE----ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAME 83 (106)
T ss_dssp EEECCCTT----CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHH
T ss_pred EEeCCCCC----CCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHH
Confidence 45665432 2345788999999998776652 123455678888888775
No 136
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.84 E-value=98 Score=16.54 Aligned_cols=49 Identities=12% Similarity=0.088 Sum_probs=33.1
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcCCeeEEEcC-------CccEEEecCHHHHHHHHh
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG-------TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-------~~~~v~i~~p~~~~~i~~ 86 (148)
-+++++..- --.+.+.++.++||+|..+.+. +.-.|...+++.++.++.
T Consensus 18 l~V~nlp~~----~t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~ 73 (103)
T 2cq3_A 18 LHVSNIPFR----FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRARE 73 (103)
T ss_dssp EEEESCCTT----CCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHH
T ss_pred EEEeCCCCC----CCHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHH
Confidence 356666432 2345788899999998777652 234556778888888775
No 137
>3tyt_A Heterogeneous nuclear ribonucleoprotein L; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 1.60A {Mus musculus} PDB: 3s01_A 3to8_A
Probab=22.81 E-value=1.5e+02 Score=18.59 Aligned_cols=49 Identities=12% Similarity=0.027 Sum_probs=33.9
Q ss_pred ceeeecc-hhcccCchHHHHHHHHhhcCCeeEEEcC----CccEEEecCHHHHHHHHh
Q 043622 34 PIVGHLY-LIFKNKPLHRTLSQLSSKHGPILLLNLG----TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 34 p~~G~~~-~~~~~~~~~~~~~~~~~~yg~v~~~~~~----~~~~v~i~~p~~~~~i~~ 86 (148)
-++||+. .-. -.+.+.++..+||+|..+.+. |.-.|...+++.++.++.
T Consensus 7 l~V~nL~~~~~----~~~~L~~~F~~~G~v~~v~i~~~~~g~afV~f~~~~~A~~Ai~ 60 (205)
T 3tyt_A 7 LMVYGLDQSKM----NCDRVFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAIT 60 (205)
T ss_dssp EEEECCCTTTC----CHHHHHHHHTTTSCEEEEEECTTSTTCEEEEESSHHHHHHHHH
T ss_pred EEEeCCCcccC----CHHHHHHHHHhcCCeEEEEEecCCCCEEEEEECCHHHHHHHHH
Confidence 3567775 321 235788999999999888753 345677778888776664
No 138
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.78 E-value=96 Score=16.40 Aligned_cols=48 Identities=19% Similarity=0.238 Sum_probs=32.9
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcCC---------ccEEEecCHHHHHHHHh
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGT---------RRVLLLSSPSAVEECFT 86 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~~p~~~~~i~~ 86 (148)
+++++..- --.+.+.++.++||+|..+.+.. .-.|...+++.++.++.
T Consensus 12 ~V~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 68 (99)
T 1whw_A 12 FVRNLSYT----SSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYA 68 (99)
T ss_dssp EEECCCTT----CCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHH
T ss_pred EEeCCCCC----CCHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHH
Confidence 45665432 23457888999999998887632 23566778888888774
No 139
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.04 E-value=1.1e+02 Score=16.86 Aligned_cols=52 Identities=13% Similarity=0.056 Sum_probs=35.0
Q ss_pred CCceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCC---ccEEEecCHHHHHHHHh
Q 043622 32 ALPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGT---RRVLLLSSPSAVEECFT 86 (148)
Q Consensus 32 ~~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---~~~v~i~~p~~~~~i~~ 86 (148)
..-.+||+..- .---+.+.+++++||.|..+.+.. .-.|-..+.+.+..+..
T Consensus 16 ~~l~V~nLp~~---~~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 70 (102)
T 1x4d_A 16 RVVHIMDFQRG---KNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVD 70 (102)
T ss_dssp CEEEEESCCCS---SSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCCC---cCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 33456777530 224467889999999998887643 34566678887777764
No 140
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=21.95 E-value=97 Score=16.17 Aligned_cols=48 Identities=19% Similarity=0.255 Sum_probs=31.6
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcCC--------ccEEEecCHHHHHHHHh
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGT--------RRVLLLSSPSAVEECFT 86 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~--------~~~v~i~~p~~~~~i~~ 86 (148)
+++++..- --.+.+.+..++||+|..+.+.. .-.|...+++.++.++.
T Consensus 20 ~v~nlp~~----~~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 75 (95)
T 2ywk_A 20 FVGNLEAR----VREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIA 75 (95)
T ss_dssp EEECCCTT----CCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHH
T ss_pred EEECCCCC----CCHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHH
Confidence 55666432 23467889999999987766422 23455678888877775
No 141
>2cjk_A Nuclear polyadenylated RNA-binding protein 4; HRP1, RNA-binding, RNA processing, mRNA processing, nonsense-mediated mRNA decay, cleavage; NMR {Saccharomyces cerevisiae} PDB: 2km8_C
Probab=21.73 E-value=1.3e+02 Score=17.52 Aligned_cols=41 Identities=17% Similarity=0.184 Sum_probs=29.0
Q ss_pred hHHHHHHHHhhcCCeeEEEcCC---------ccEEEecCHHHHHHHHhhC
Q 043622 48 LHRTLSQLSSKHGPILLLNLGT---------RRVLLLSSPSAVEECFTKS 88 (148)
Q Consensus 48 ~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~~p~~~~~i~~~~ 88 (148)
-.+.+.+..++||++..+.+.. .-.|-..+++.+..++..+
T Consensus 100 t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~ 149 (167)
T 2cjk_A 100 RPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNK 149 (167)
T ss_dssp CHHHHHHHHHTTSCCSEEECCCSSSSSTTSEEEEEEESSHHHHHHHHHCS
T ss_pred CHHHHHHHHHhCccEEEEEEEEcCCCCccceEEEEEECCHHHHHHHHhCC
Confidence 3467888899999987776532 2345667888888887643
No 142
>4f02_A Polyadenylate-binding protein 1; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens} PDB: 1cvj_A*
Probab=21.57 E-value=1.6e+02 Score=18.39 Aligned_cols=50 Identities=22% Similarity=0.232 Sum_probs=33.4
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcCCeeEEEcC-----C----ccEEEecCHHHHHHHHhh
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG-----T----RRVLLLSSPSAVEECFTK 87 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-----~----~~~v~i~~p~~~~~i~~~ 87 (148)
-++|++..- --.+.+.+..++||+|..+.+. + .-.|...+++.++.++..
T Consensus 18 lfVgnLp~~----~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 76 (213)
T 4f02_A 18 LYVGDLHPD----VTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 76 (213)
T ss_dssp EEEESCCTT----CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC----CCHHHHHHHHHhhCCEEEEEEecccCCCCccccccceeCCHHHHHHHHHH
Confidence 366776533 2346788899999998776542 1 235667788888877754
No 143
>2cqi_A Nucleolysin TIAR; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, ST genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.39 E-value=1.1e+02 Score=16.39 Aligned_cols=49 Identities=18% Similarity=0.073 Sum_probs=32.7
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCC-------ccEEEecCHHHHHHHHh
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGT-------RRVLLLSSPSAVEECFT 86 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~-------~~~v~i~~p~~~~~i~~ 86 (148)
-++|++..- --.+.+.++.++||+|..+.+.. .-.|...+++.++.++.
T Consensus 18 l~V~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~ 73 (103)
T 2cqi_A 18 LYVGNLSRD----VTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALA 73 (103)
T ss_dssp EEEESCCTT----CCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCcc----CCHHHHHHHHHhcCCEeEEEEEecCCCCCCEEEEEECCHHHHHHHHH
Confidence 356666532 23467888999999987765422 33556678888887775
No 144
>1x4f_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.32 E-value=87 Score=17.73 Aligned_cols=51 Identities=10% Similarity=0.002 Sum_probs=33.3
Q ss_pred CceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCC---ccEEEecCHHHHHHHHh
Q 043622 33 LPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGT---RRVLLLSSPSAVEECFT 86 (148)
Q Consensus 33 ~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---~~~v~i~~p~~~~~i~~ 86 (148)
.-++||+..- .--.+.+.++.++||+|..+.+.. .-.|-..+.+.+...+.
T Consensus 27 ~l~V~NLp~~---~~te~~L~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 80 (112)
T 1x4f_A 27 VIHLSNLPHS---GYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVD 80 (112)
T ss_dssp EEEEESCCCS---SCCSHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred EEEEeCCCCc---cCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 3466776531 023357889999999988777542 33556668887777665
No 145
>3n9u_C Cleavage and polyadenylation specificity factor S; protein-protein complex, coexpression, heterotetramer, mRNA maturation, mRNA cleavage; 1.92A {Homo sapiens}
Probab=21.26 E-value=1.4e+02 Score=17.79 Aligned_cols=40 Identities=15% Similarity=0.223 Sum_probs=28.5
Q ss_pred hHHHHHHHHhhcC--CeeEEEcC-----C----ccEEEecCHHHHHHHHhh
Q 043622 48 LHRTLSQLSSKHG--PILLLNLG-----T----RRVLLLSSPSAVEECFTK 87 (148)
Q Consensus 48 ~~~~~~~~~~~yg--~v~~~~~~-----~----~~~v~i~~p~~~~~i~~~ 87 (148)
-.+.+.++.++|| ++..+.+. + .-.|...+++.++.++..
T Consensus 68 te~~L~~~F~~~G~i~v~~v~i~~d~~tg~skGfaFV~f~~~~~A~~Ai~~ 118 (156)
T 3n9u_C 68 TDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLEL 118 (156)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCccEEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3467889999999 88777642 2 235567788888888764
No 146
>2cph_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.18 E-value=1.1e+02 Score=16.43 Aligned_cols=50 Identities=14% Similarity=0.236 Sum_probs=34.4
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCCc----------cEEEecCHHHHHHHHhh
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGTR----------RVLLLSSPSAVEECFTK 87 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~----------~~v~i~~p~~~~~i~~~ 87 (148)
-++|++..- --.+.+.++.++||+|..+.+... -.|...+++.++.++..
T Consensus 18 l~V~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 77 (107)
T 2cph_A 18 ILVRNIPFQ----ANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNA 77 (107)
T ss_dssp EEEESCCTT----CCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCc----CCHHHHHHHHHccCCeEEEEEecCCCCCCCcCceEEEEECCHHHHHHHHHH
Confidence 356776533 234578899999999988776432 34566788888887764
No 147
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.17 E-value=1.2e+02 Score=16.73 Aligned_cols=50 Identities=18% Similarity=0.221 Sum_probs=33.3
Q ss_pred CceeeecchhcccCchHHHHHHHHhhcCCeeEEEcC---CccEEEecCHHHHHHHHh
Q 043622 33 LPIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG---TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 33 ~p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---~~~~v~i~~p~~~~~i~~ 86 (148)
.-++||+..- --.+.+.++.++||.|..+.+. +.-.|-..+.+.+..++.
T Consensus 17 ~l~V~nLp~~----~te~~L~~~F~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (104)
T 1wex_A 17 VVHVRGLCES----VVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVT 69 (104)
T ss_dssp EEEEESCCSS----CCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC----CCHHHHHHHHHhCCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 3456776432 2346788999999998877653 234556678887777765
No 148
>2dit_A HIV TAT specific factor 1 variant; structural genomics, RRM_1 domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.14 E-value=1.2e+02 Score=16.74 Aligned_cols=38 Identities=24% Similarity=0.260 Sum_probs=26.4
Q ss_pred HHHHHHHHhhcCCeeEEEcC-----CccEEEecCHHHHHHHHh
Q 043622 49 HRTLSQLSSKHGPILLLNLG-----TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 49 ~~~~~~~~~~yg~v~~~~~~-----~~~~v~i~~p~~~~~i~~ 86 (148)
-+.+.+..++||+|..+.+. |.-.|...+++.++.++.
T Consensus 40 e~~l~~~f~~~G~v~~v~i~~~~~~G~afV~f~~~~~A~~Ai~ 82 (112)
T 2dit_A 40 REDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQ 82 (112)
T ss_dssp HHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHH
T ss_pred HHHHHHHHHccCCEeEEEEecCCCCEEEEEEECCHHHHHHHHH
Confidence 35788889999988776542 334555667887777764
No 149
>1x4g_A Nucleolysin TIAR; structural genomics, RRM domain, TIA-1 related protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.05 E-value=1.1e+02 Score=16.56 Aligned_cols=48 Identities=13% Similarity=0.091 Sum_probs=32.8
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcC---CccEEEecCHHHHHHHHh
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG---TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---~~~~v~i~~p~~~~~i~~ 86 (148)
++|++..- --.+.+.+..++||+|..+.+. +.-.|...+++.+..++.
T Consensus 29 ~V~nl~~~----~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~A~~ 79 (109)
T 1x4g_A 29 YCGGIASG----LTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIV 79 (109)
T ss_dssp EEECCSSC----CCHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEeCCCCC----CCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 55666532 2346788889999998877653 334566778888877774
No 150
>2dgo_A Cytotoxic granule-associated RNA binding protein 1; RRM domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rne_A 2dh7_A
Probab=20.99 E-value=1.2e+02 Score=16.66 Aligned_cols=49 Identities=12% Similarity=0.040 Sum_probs=32.6
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcCC---------ccEEEecCHHHHHHHHhh
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGT---------RRVLLLSSPSAVEECFTK 87 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~~p~~~~~i~~~ 87 (148)
++|++..- --.+.+.++.++||.|..+.+.. .-.|...+++.++.++..
T Consensus 19 ~V~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (115)
T 2dgo_A 19 FVGDLSPE----ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 76 (115)
T ss_dssp EEESCCTT----CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCC----CCHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 55666432 23467888999999987765421 234566788888888753
No 151
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.98 E-value=1e+02 Score=16.05 Aligned_cols=49 Identities=22% Similarity=0.162 Sum_probs=32.3
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcCCeeEEEcC-----C----ccEEEecCHHHHHHHHh
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG-----T----RRVLLLSSPSAVEECFT 86 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-----~----~~~v~i~~p~~~~~i~~ 86 (148)
-+++++..- --.+.+.++.++||++..+.+. + .-.|...+++.++.++.
T Consensus 18 l~v~nlp~~----~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 75 (95)
T 2cqc_A 18 LGVFGLSLY----TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 75 (95)
T ss_dssp EEEESCCSS----CCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHH
T ss_pred EEEECCCCC----CCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHH
Confidence 356666432 2345788899999998776652 1 23455678888887775
No 152
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=20.81 E-value=1e+02 Score=15.96 Aligned_cols=48 Identities=19% Similarity=0.216 Sum_probs=31.6
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeEEEcC-------CccEEEecCHHHHHHHHh
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLG-------TRRVLLLSSPSAVEECFT 86 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-------~~~~v~i~~p~~~~~i~~ 86 (148)
+++++..- --.+.+.++.++||++..+.+. +.-.|...+++.++.++.
T Consensus 12 ~V~nlp~~----~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~ 66 (92)
T 2dgv_A 12 FVRNLPFD----FTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACR 66 (92)
T ss_dssp EECSCCTT----CCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHH
T ss_pred EEeCCCCC----CCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHH
Confidence 45665432 2446788999999988766542 223455678888887776
No 153
>1x5u_A Splicing factor 3B subunit 4 (spliceosome associated protein 49) (SAP 49) (SF3B50)...; structure genomics,RRM domain,splicing factor 3B; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.79 E-value=1.1e+02 Score=16.36 Aligned_cols=50 Identities=16% Similarity=0.093 Sum_probs=34.6
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCC---------ccEEEecCHHHHHHHHhh
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGT---------RRVLLLSSPSAVEECFTK 87 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~~p~~~~~i~~~ 87 (148)
-++|++..- --.+.+.++.++||+|..+.+.. .-.|...+++.++.++..
T Consensus 18 l~V~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (105)
T 1x5u_A 18 VYVGGLDEK----VSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 76 (105)
T ss_dssp EEEECCCTT----CCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC----CCHHHHHHHHHhcCCeEEEEEEecCCCCcCCcEEEEEECCHHHHHHHHHH
Confidence 356766533 23467889999999988877533 235667788888888864
No 154
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=20.61 E-value=1.1e+02 Score=16.36 Aligned_cols=49 Identities=10% Similarity=0.041 Sum_probs=34.0
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCC-ccEEEecCHHHHHHHHh
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGT-RRVLLLSSPSAVEECFT 86 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~-~~~v~i~~p~~~~~i~~ 86 (148)
-+++++..- --.+.+.++.++||+|..+.+.. .-.|...+++.++.++.
T Consensus 14 l~V~nl~~~----~t~~~l~~~F~~~G~i~~v~~~~~~afV~f~~~~~a~~A~~ 63 (103)
T 2dgu_A 14 LFVRNLANT----VTEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAME 63 (103)
T ss_dssp EEEECCCTT----CCHHHHHHHHHHHSCEEEEEECSSCEEEEESSHHHHHHHHH
T ss_pred EEEeCCCCC----CCHHHHHHHHHhcCCEEEEEEECCEEEEEeCCHHHHHHHHH
Confidence 356776532 23467888999999988877643 34555678888888776
No 155
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=20.19 E-value=1.1e+02 Score=16.19 Aligned_cols=49 Identities=16% Similarity=0.043 Sum_probs=32.0
Q ss_pred ceeeecchhcccCchHHHHHHHHhhcCCeeEEEcCC---ccEEEecCHHHHHHHHh
Q 043622 34 PIVGHLYLIFKNKPLHRTLSQLSSKHGPILLLNLGT---RRVLLLSSPSAVEECFT 86 (148)
Q Consensus 34 p~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---~~~v~i~~p~~~~~i~~ 86 (148)
-++|++..- --.+.+.++.++||++..+.+.. .-.|...+++.++.++.
T Consensus 18 l~V~nlp~~----~t~~~l~~~F~~~G~i~~v~~~~~kg~afV~f~~~~~a~~a~~ 69 (99)
T 2cpj_A 18 LFVGNLPPD----ITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKV 69 (99)
T ss_dssp EEEESCCTT----CCHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHH
T ss_pred EEEeCCCCC----CCHHHHHHHHhhcCCeEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 356776533 23467889999999887766532 33455667777777764
No 156
>1wg5_A Heterogeneous nuclear ribonucleoprotein H; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.10 E-value=1.2e+02 Score=16.40 Aligned_cols=57 Identities=14% Similarity=0.073 Sum_probs=36.1
Q ss_pred eeeecchhcccCchHHHHHHHHhhcCCeeE-EEcC--------CccEEEecCHHHHHHHHhhCCCCCCCC
Q 043622 35 IVGHLYLIFKNKPLHRTLSQLSSKHGPILL-LNLG--------TRRVLLLSSPSAVEECFTKSDVVFANR 95 (148)
Q Consensus 35 ~~G~~~~~~~~~~~~~~~~~~~~~yg~v~~-~~~~--------~~~~v~i~~p~~~~~i~~~~~~~~~~~ 95 (148)
++|++..- --.+.+.++.++||.+.. +.+. |.-.|...+++.++..+..+...+..+
T Consensus 19 ~V~nLp~~----~te~~l~~~F~~~G~v~~~v~i~~~~~g~~~G~afV~F~~~~~a~~A~~~~~~~~~gr 84 (104)
T 1wg5_A 19 RLRGLPFG----CSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 84 (104)
T ss_dssp EEESCCTT----CCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHTTTTCCSSSS
T ss_pred EEeCCCCC----CCHHHHHHHHHhcCCcceeEEEEECCCCCcceEEEEEECCHHHHHHHHHhCcchhCCc
Confidence 55665432 244678899999997654 4431 234566789999998887644444333
Done!