BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043623
(359 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 332 bits (852), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 161/357 (45%), Positives = 237/357 (66%), Gaps = 3/357 (0%)
Query: 2 SSIEVEDANELFQAQAHLYKHVLSYMSSIFLKCAVELGIPDIIHKRGRPVTLPELVSALE 61
SSI +E+F+AQA LYK++ +++ S+ LK ++E+ IP+IIH G+P+TL LVS L+
Sbjct: 3 SSINNRKPSEIFKAQALLYKNMYAFVDSMSLKWSIEMNIPNIIHNHGKPITLSNLVSILQ 62
Query: 62 FQPNKRNCLRRIMRLLDHSGFFSTTKVHNSREEENEAYALTSASKLLLKDKPYCLSPFVL 121
K + ++R+MR L H+GFF + E E EAYALT AS+LL+K CL+P V
Sbjct: 63 IPSTKVDNVQRLMRYLAHNGFFEII-TNQELENEEEAYALTVASELLVKGTELCLAPMVE 121
Query: 122 LVTDAAFITPGHYLSRWLRGNELPDPFVTGHGINIWGYAEQNHEFNNLFNQGLASDSQMA 181
V D T H L +W+ +L F G ++W + +N E+N L+N LASDS+M
Sbjct: 122 CVLDPTLSTSFHNLKKWVYEEDLT-LFAVNLGCDLWEFLNKNPEYNTLYNDALASDSKMI 180
Query: 182 KLIIKDCKHIFDGLSSLVEVGGGTGSFARIISEAFPSIKCSVLELPHVIADLPETDNLKF 241
L +KDC +F+GL S+V+VGGG G+ +II E FP + C V + P V+ +L ++NL +
Sbjct: 181 NLAMKDCNLVFEGLESIVDVGGGNGTTGKIICETFPKLTCVVFDRPKVVENLCGSNNLTY 240
Query: 242 IAGDMNQSIPSADAFLFKLIFHDYDDEVCLKLLKNCREAVASSDGREKVIIVDIVVNEKK 301
+ GDM S+P ADA L K + HD+ D+ C+K+LK C+EAV S R KVI++D+V+NEKK
Sbjct: 241 VGGDMFISVPKADAVLLKAVLHDWTDKDCIKILKKCKEAVTSDGKRGKVIVIDMVINEKK 300
Query: 302 DKPEITEAKLLYDALMMTCVPGIERSEKEWERLFFDAGFTSYKITPLLGLRSFIEVY 358
D+ ++T+ KLL + + ++CV G ER+E+EW++LF +AGF YKI+P GL S IE+Y
Sbjct: 301 DENQLTQIKLLMN-VTISCVNGKERNEEEWKKLFIEAGFQDYKISPFTGLMSLIEIY 356
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 323 bits (827), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 234/357 (65%), Gaps = 8/357 (2%)
Query: 2 SSIEVEDANELFQAQAHLYKHVLSYMSSIFLKCAVELGIPDIIHKRGRPVTLPELVSALE 61
SSI +E+F+AQA LYKH+ +++ S+ LK AVE+ IP+II G+P++L LVS L+
Sbjct: 3 SSINGRKPSEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQ 62
Query: 62 FQPNKRNCLRRIMRLLDHSGFFSTTKVHNSREEENEAYALTSASKLLLKDKPYCLSPFVL 121
+K +RR+MR L H+GFF +E E+YALT AS+LL++ CL+P V
Sbjct: 63 VPSSKIGNVRRLMRYLAHNGFFEIIT------KEEESYALTVASELLVRGSDLCLAPMVE 116
Query: 122 LVTDAAFITPGHYLSRWLRGNELPDPFVTGHGINIWGYAEQNHEFNNLFNQGLASDSQMA 181
V D H L +W+ +L F G W + ++N E+N FN +ASDS++
Sbjct: 117 CVLDPTLSGSYHELKKWIYEEDLT-LFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLI 175
Query: 182 KLIIKDCKHIFDGLSSLVEVGGGTGSFARIISEAFPSIKCSVLELPHVIADLPETDNLKF 241
L ++DC +FDGL S+V+VGGGTG+ A+II E FP +KC V + P V+ +L ++NL +
Sbjct: 176 NLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTY 235
Query: 242 IAGDMNQSIPSADAFLFKLIFHDYDDEVCLKLLKNCREAVASSDGREKVIIVDIVVNEKK 301
+ GDM SIP+ADA L K I H++ D+ CL++LK C+EAV + R KV I+D+V+++KK
Sbjct: 236 VGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKK 295
Query: 302 DKPEITEAKLLYDALMMTCVPGIERSEKEWERLFFDAGFTSYKITPLLGLRSFIEVY 358
D+ ++T+ KLL D + M C+ G ER+E+EW++LF +AGF YKI+PL G S IE+Y
Sbjct: 296 DENQVTQIKLLMD-VNMACLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIY 351
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 309 bits (792), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 156/357 (43%), Positives = 227/357 (63%), Gaps = 8/357 (2%)
Query: 2 SSIEVEDANELFQAQAHLYKHVLSYMSSIFLKCAVELGIPDIIHKRGRPVTLPELVSALE 61
SSI +E+F+AQA LYKH+ +++ S LK AVE IP+II G+P++L LVS L+
Sbjct: 3 SSINGRKPSEIFKAQALLYKHIYAFIDSXSLKWAVEXNIPNIIQNHGKPISLSNLVSILQ 62
Query: 62 FQPNKRNCLRRIMRLLDHSGFFSTTKVHNSREEENEAYALTSASKLLLKDKPYCLSPFVL 121
+K +RR+ R L H+GFF +E E+YALT AS+LL++ CL+P V
Sbjct: 63 VPSSKIGNVRRLXRYLAHNGFFEIIT------KEEESYALTVASELLVRGSDLCLAPXVE 116
Query: 122 LVTDAAFITPGHYLSRWLRGNELPDPFVTGHGINIWGYAEQNHEFNNLFNQGLASDSQMA 181
V D H L +W+ +L F G W + ++N E+N FN ASDS++
Sbjct: 117 CVLDPTLSGSYHELKKWIYEEDLT-LFGVTLGSGFWDFLDKNPEYNTSFNDAXASDSKLI 175
Query: 182 KLIIKDCKHIFDGLSSLVEVGGGTGSFARIISEAFPSIKCSVLELPHVIADLPETDNLKF 241
L ++DC +FDGL S+V+VGGGTG+ A+II E FP +KC V + P V+ +L ++NL +
Sbjct: 176 NLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTY 235
Query: 242 IAGDMNQSIPSADAFLFKLIFHDYDDEVCLKLLKNCREAVASSDGREKVIIVDIVVNEKK 301
+ GD SIP+ADA L K I H++ D+ CL++LK C+EAV + R KV I+D V+++KK
Sbjct: 236 VGGDXFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDXVIDKKK 295
Query: 302 DKPEITEAKLLYDALMMTCVPGIERSEKEWERLFFDAGFTSYKITPLLGLRSFIEVY 358
D+ ++T+ KLL D + C+ G ER+E+EW++LF +AGF YKI+PL G S IE+Y
Sbjct: 296 DENQVTQIKLLXD-VNXACLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIY 351
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 300 bits (768), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 231/355 (65%), Gaps = 4/355 (1%)
Query: 8 DANELFQAQAHLYKHVLSYMSSIFLKCAVELGIPDIIHKRGRPVTLPELVSALEFQPNKR 67
+ +EL+ AQ HLYKHV +++SS+ LK A+ELGI D IH G+P+TL EL S+L+ P+K
Sbjct: 2 EESELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKV 61
Query: 68 NCLRRIMRLLDHSGFFSTTKVHNSREEENE--AYALTSASKLLLKDKPYCLSPFVLLVTD 125
N L R +RLL H+GFF+ T V +E E AY+LT SKLL+ KP CLS V
Sbjct: 62 NILHRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALH 121
Query: 126 AAFITPGHYLSRWLRGNELPDPFVTGHGINIWGYAEQNHEFNNL--FNQGLASDSQMAKL 183
+ + +W ++ F G + W + ++ E + L F +ASDS+M KL
Sbjct: 122 PSSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKL 181
Query: 184 IIKDCKHIFDGLSSLVEVGGGTGSFARIISEAFPSIKCSVLELPHVIADLPETDNLKFIA 243
++++ K +F+GL SLV+VGGGTG ++I E FP +KC+V + P V+ +L +NL F+
Sbjct: 182 VLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVG 241
Query: 244 GDMNQSIPSADAFLFKLIFHDYDDEVCLKLLKNCREAVASSDGREKVIIVDIVVNEKKDK 303
GDM +SIPSADA L K + HD++DE LK+LKN +EA++ KVII+DI ++E D
Sbjct: 242 GDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDD 301
Query: 304 PEITEAKLLYDALMMTCVPGIERSEKEWERLFFDAGFTSYKITPLLGLRSFIEVY 358
+TE +L YD +M+T G ER+++EWE+L +DAGF+SYKITP+ G +S IEVY
Sbjct: 302 RGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVY 356
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 300 bits (768), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 231/355 (65%), Gaps = 4/355 (1%)
Query: 8 DANELFQAQAHLYKHVLSYMSSIFLKCAVELGIPDIIHKRGRPVTLPELVSALEFQPNKR 67
+ +EL+ AQ HLYKHV +++SS+ LK A+ELGI D IH G+P+TL EL S+L+ P+K
Sbjct: 3 EESELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKV 62
Query: 68 NCLRRIMRLLDHSGFFSTTKVHNSREEENE--AYALTSASKLLLKDKPYCLSPFVLLVTD 125
N L R +RLL H+GFF+ T V +E E AY+LT SKLL+ KP CLS V
Sbjct: 63 NILHRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALH 122
Query: 126 AAFITPGHYLSRWLRGNELPDPFVTGHGINIWGYAEQNHEFNNL--FNQGLASDSQMAKL 183
+ + +W ++ F G + W + ++ E + L F +ASDS+M KL
Sbjct: 123 PSSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKL 182
Query: 184 IIKDCKHIFDGLSSLVEVGGGTGSFARIISEAFPSIKCSVLELPHVIADLPETDNLKFIA 243
++++ K +F+GL SLV+VGGGTG ++I E FP +KC+V + P V+ +L +NL F+
Sbjct: 183 VLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVG 242
Query: 244 GDMNQSIPSADAFLFKLIFHDYDDEVCLKLLKNCREAVASSDGREKVIIVDIVVNEKKDK 303
GDM +SIPSADA L K + HD++DE LK+LKN +EA++ KVII+DI ++E D
Sbjct: 243 GDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDD 302
Query: 304 PEITEAKLLYDALMMTCVPGIERSEKEWERLFFDAGFTSYKITPLLGLRSFIEVY 358
+TE +L YD +M+T G ER+++EWE+L +DAGF+SYKITP+ G +S IEVY
Sbjct: 303 RGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVY 357
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 300 bits (767), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/353 (45%), Positives = 230/353 (65%), Gaps = 4/353 (1%)
Query: 10 NELFQAQAHLYKHVLSYMSSIFLKCAVELGIPDIIHKRGRPVTLPELVSALEFQPNKRNC 69
+EL+ AQ HLYKHV +++SS+ LK A+ELGI D IH G+P+TL EL S+L+ P+K N
Sbjct: 1 SELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNI 60
Query: 70 LRRIMRLLDHSGFFSTTKVHNSREEENE--AYALTSASKLLLKDKPYCLSPFVLLVTDAA 127
L R +RLL H+GFF+ T V +E E AY+LT SKLL+ KP CLS V +
Sbjct: 61 LHRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPS 120
Query: 128 FITPGHYLSRWLRGNELPDPFVTGHGINIWGYAEQNHEFNNL--FNQGLASDSQMAKLII 185
+ +W ++ F G + W + ++ E + L F +ASDS+M KL++
Sbjct: 121 SLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVL 180
Query: 186 KDCKHIFDGLSSLVEVGGGTGSFARIISEAFPSIKCSVLELPHVIADLPETDNLKFIAGD 245
++ K +F+GL SLV+VGGGTG ++I E FP +KC+V + P V+ +L +NL F+ GD
Sbjct: 181 QENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGD 240
Query: 246 MNQSIPSADAFLFKLIFHDYDDEVCLKLLKNCREAVASSDGREKVIIVDIVVNEKKDKPE 305
M +SIPSADA L K + HD++DE LK+LKN +EA++ KVII+DI ++E D
Sbjct: 241 MFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRG 300
Query: 306 ITEAKLLYDALMMTCVPGIERSEKEWERLFFDAGFTSYKITPLLGLRSFIEVY 358
+TE +L YD +M+T G ER+++EWE+L +DAGF+SYKITP+ G +S IEVY
Sbjct: 301 LTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVY 353
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 168/321 (52%), Gaps = 11/321 (3%)
Query: 32 LKCAVELGIPDIIHKRGRP---VTLPELVSAL-EFQPNKRNCLRRIMRLLDHSGFFSTTK 87
LK A+EL + +I+ K P ++ E+ + L P L R++RLL + T
Sbjct: 38 LKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTL 97
Query: 88 VHNSREEENEAYALTSASKLLLKDK-PYCLSPFVLLVTDAAFITPGHYLSRWLRGNELPD 146
+ Y L K L K++ L+PF+LL TD + P YL + +P
Sbjct: 98 RELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWFYLKDAILEGGIP- 156
Query: 147 PFVTGHGINIWGYAEQNHEFNNLFNQGLASDSQMAKLIIKDCKHIFDGLSSLVEVGGGTG 206
F +G+NI+ Y +H N +FN+G++S+S + I + + F+GL+++V+VGGGTG
Sbjct: 157 -FNKAYGMNIFDYHGTDHRINKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTG 215
Query: 207 SFARIISEAFPSIKCSVLELPHVIADLPETDNLKFIAGDMNQSIPSADAFLFKLIFHDYD 266
+ A +I +PSI +LPHVI D P ++ + GDM +P DA K I HD+
Sbjct: 216 AVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAIFIKWICHDWS 275
Query: 267 DEVCLKLLKNCREAVASSDGREKVIIVDIVVNEKKDKPEITEAKLLYDALMMTCVP-GIE 325
DE CLKLLKNC A+ KVI+ + ++ D T+ + DALM+ P G E
Sbjct: 276 DEHCLKLLKNCYAALPD---HGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKE 332
Query: 326 RSEKEWERLFFDAGFTSYKIT 346
R+EKE++ L +GF +K+
Sbjct: 333 RTEKEFQALAMASGFRGFKVA 353
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 171/337 (50%), Gaps = 12/337 (3%)
Query: 16 QAHLYKHVLSYMS--SIFLKCAVELGIPDIIHKRGRPVTLP--ELVSAL-EFQPNKRNCL 70
+A+L+ L+ S + LK A+EL + +II K G + E+ S L P+ L
Sbjct: 18 EANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVML 77
Query: 71 RRIMRLLDHSGFFSTTKVHNSREEENEAYALTSASKLLLKDKP-YCLSPFVLLVTDAAFI 129
R++RLL + + + Y L + +K L+K++ +S L+ D +
Sbjct: 78 DRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLM 137
Query: 130 TPGHYLSRWLRGNELPDPFVTGHGINIWGYAEQNHEFNNLFNQGLASDSQMAKLIIKDCK 189
++L + +P F +G+ + Y + FN +FN+G++ S + I +
Sbjct: 138 ESWYHLKDAVLDGGIP--FNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETY 195
Query: 190 HIFDGLSSLVEVGGGTGSFARIISEAFPSIKCSVLELPHVIADLPETDNLKFIAGDMNQS 249
F+GL SLV+VGGGTG+ I +P+IK +LPHVI D P ++ + GDM S
Sbjct: 196 TGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVS 255
Query: 250 IPSADAFLFKLIFHDYDDEVCLKLLKNCREAVASSDGREKVIIVDIVVNEKKDKPEITEA 309
IP ADA K I HD+ DE CLK LKNC EA+ + KVI+ + ++ D T+
Sbjct: 256 IPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNG---KVIVAECILPVAPDSSLATKG 312
Query: 310 KLLYDALMMTCVP-GIERSEKEWERLFFDAGFTSYKI 345
+ D +M+ P G ER++KE+E L AGF +K+
Sbjct: 313 VVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKV 349
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 159/320 (49%), Gaps = 10/320 (3%)
Query: 32 LKCAVELGIPDI-IHKRGRPVTLPELVSAL--EFQPNKRNCLRRIMRLLDHSGFFSTTKV 88
LK A+ELG+ +I + G+ +T E+ + L P + + RI+RLL +
Sbjct: 37 LKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILRLLASYNVVTCLVE 96
Query: 89 HNSREEENEAYALTSASKLLLKDK-PYCLSPFVLLVTDAAFITPGHYLSRWLRGNELPDP 147
+ +Y K L ++ ++ L+ D + +YL + +P
Sbjct: 97 EGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIP-- 154
Query: 148 FVTGHGINIWGYAEQNHEFNNLFNQGLASDSQMAKLIIKDCKHIFDGLSSLVEVGGGTGS 207
F +G++ + Y + FN +FN+G+ + S + + + H F+GL +LV+VGGG G+
Sbjct: 155 FNKAYGMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLLELYHGFEGLGTLVDVGGGVGA 214
Query: 208 FARIISEAFPSIKCSVLELPHVIADLPETDNLKFIAGDMNQSIPSADAFLFKLIFHDYDD 267
I+ +P+IK +LPHVI++ P+ + + GDM + +PS D L K I HD+ D
Sbjct: 215 TVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFKEVPSGDTILMKWILHDWSD 274
Query: 268 EVCLKLLKNCREAVASSDGREKVIIVDIVVNEKKDKPEITEAKLLYDALMMTCVP-GIER 326
+ C LLKNC +A+ + KV++V ++ + ++ D +M+ P G ER
Sbjct: 275 QHCATLLKNCYDALPA---HGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRER 331
Query: 327 SEKEWERLFFDAGFTSYKIT 346
E+E++ L AGFT K T
Sbjct: 332 YEREFQALARGAGFTGVKST 351
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 165/328 (50%), Gaps = 25/328 (7%)
Query: 32 LKCAVELGIPDIIHKRGRP---VTLPELVSALEFQPNKR---NCLRRIMRLL-DHSGFFS 84
L A++L + +II K P ++ E+ S L N L R++RLL +S S
Sbjct: 41 LNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTS 100
Query: 85 TTKVHNSREEENEAYALTSASKLLLKDKPYCLSPFVLLVTDAAFITPGHYLSRWLRGNEL 144
TT+ E Y L+ K L+ D+ L + F+ L W+ E
Sbjct: 101 TTRTIEDGGAE-RVYGLSMVGKYLVPDESRGY-----LASFTTFLCYPALLQVWMNFKEA 154
Query: 145 P-----DPFVTGHGINIWGYAEQNHEFNNLFNQGLAS--DSQMAKLIIKDCKHIFDGLSS 197
D F HG+ + + ++ + N +FN+ + ++M +++ + F+G+S+
Sbjct: 155 VVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRML--EIYTGFEGIST 212
Query: 198 LVEVGGGTGSFARIISEAFPSIKCSVLELPHVIADLPETDNLKFIAGDMNQSIPSADAFL 257
LV+VGGG+G +I +P IK +LP VI + P ++ + GDM S+P DA +
Sbjct: 213 LVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMI 272
Query: 258 FKLIFHDYDDEVCLKLLKNCREAVASSDGREKVIIVDIVVNEKKDKPEITEAKLLYDALM 317
K + H++ DE C++ L NC +A++ + KVIIV+ ++ E+ + E ++ D LM
Sbjct: 273 LKAVCHNWSDEKCIEFLSNCHKALSPNG---KVIIVEFILPEEPNTSEESKLVSTLDNLM 329
Query: 318 MTCVPGIERSEKEWERLFFDAGFTSYKI 345
V G ER+EK++E+L +GF+ +++
Sbjct: 330 FITVGGRERTEKQYEKLSKLSGFSKFQV 357
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 108/200 (54%), Gaps = 3/200 (1%)
Query: 146 DPFVTGHGINIWGYAEQNHEFNNLFNQGLASDSQMAKLIIKDCKHIFDGLSSLVEVGGGT 205
D F HG+ + + ++ + N +FN+ + F+G+S+LV+VGGG+
Sbjct: 161 DLFKNVHGVTKYEFXGKDKKXNQIFNKSXVDVCATEXKRXLEIYTGFEGISTLVDVGGGS 220
Query: 206 GSFARIISEAFPSIKCSVLELPHVIADLPETDNLKFIAGDMNQSIPSADAFLFKLIFHDY 265
G +I +P IK +LP VI + P ++ + GD S+P DA + K + H++
Sbjct: 221 GRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDXFASVPQGDAXILKAVCHNW 280
Query: 266 DDEVCLKLLKNCREAVASSDGREKVIIVDIVVNEKKDKPEITEAKLLYDALMMTCVPGIE 325
DE C++ L NC +A++ + KVIIV+ ++ E+ + E ++ D L V G E
Sbjct: 281 SDEKCIEFLSNCHKALSPNG---KVIIVEFILPEEPNTSEESKLVSTLDNLXFITVGGRE 337
Query: 326 RSEKEWERLFFDAGFTSYKI 345
R+EK++E+L +GF+ +++
Sbjct: 338 RTEKQYEKLSKLSGFSKFQV 357
>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
pdb|3LST|B Chain B, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
Length = 348
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 123/276 (44%), Gaps = 24/276 (8%)
Query: 70 LRRIMRLLDHSGFFSTTKVHNSREEENEAYALTSASKLLLKDKPYCLSPFVLLVTDAAFI 129
LRR++RLL V + E + +ALT L D P +L TD F
Sbjct: 72 LRRVLRLL---------AVRDVVRESDGRFALTDKGAALRSDSPVPARAGILXFTDTXFW 122
Query: 130 TPGHYLSRWLRGNELPDPFVTGHGINIWGYAEQNHEFNNLFNQGLASDSQMAKLIIKDCK 189
T H ++ L G E P F G ++ Y + + E L+ +G + S LI+
Sbjct: 123 TXSHRVASAL-GPERP-AFADIFGSSLDAYFDGDAEVEALYYEGXETVSAAEHLILARAG 180
Query: 190 HIFDGLSSLVEVGGGTGSFARIISEAFPSIKCSVLELPHVIA----DLPE-TDNLKFIAG 244
F ++ +VGGG G F + P ++ +L+ V+A D P+ K + G
Sbjct: 181 D-FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEG 239
Query: 245 DMNQSIPSADAFLFKLIFHDYDDEVCLKLLKNCREAVASSDGREKVIIVDIVVNEKKDKP 304
D + +P AD + K I H++ DE +++L NCR V + GR V+++D VV E D
Sbjct: 240 DFLREVPHADVHVLKRILHNWGDEDSVRILTNCRR-VXPAHGR--VLVIDAVVPEGNDAH 296
Query: 305 EITEAKLLYDALMMTCVPGIERSEKEWERLFFDAGF 340
+ E D + G ER+ E E LF AG
Sbjct: 297 QSKEX----DFXXLAARTGQERTAAELEPLFTAAGL 328
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 148/331 (44%), Gaps = 45/331 (13%)
Query: 32 LKCAVELGIPDIIHKRGRPVT-LPELVSALEFQPNKRNCLRRIMRLLDHSGFFSTTKVHN 90
+ AVELG+P+++ + R T L E A E + L + + D G
Sbjct: 55 IHVAVELGVPELLQEGPRTATALAEATGAHEQTLRRLLRLLATVGVFDDLGH-------- 106
Query: 91 SREEENEAYALTSASKLLLKDKPYCLSPFVLLVTDAAF-ITPGHY-----LSRWLRGNEL 144
++ +A + S +LL D P + TDA F P H+ L+ +R E
Sbjct: 107 -----DDLFAQNALSAVLLPD------PASPVATDARFQAAPWHWRAWEQLTHSVRTGEA 155
Query: 145 PDPFVTGHGINIWGYAEQNHEFNNLFNQGLASDSQMAKLIIKDCKHIFDGLSSLVEVGGG 204
F +G + W ++ + LFN+ S S + + F G ++ V++GGG
Sbjct: 156 S--FDVANGTSFWQLTHEDPKARELFNRAXGSVSLTEAGQVA-AAYDFSGAATAVDIGGG 212
Query: 205 TGSFARIISEAFPSIKCSVLELPHVIADLPE-------TDNLKFIAGDMNQSIP-SADAF 256
GS + +AFP ++ ++LE P V + E D + + GD ++IP AD +
Sbjct: 213 RGSLXAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIPDGADVY 272
Query: 257 LFKLIFHDYDDEVCLKLLKNCREAVASSDGREKVIIVDIVVNEKKDKPEITEAKLLYDAL 316
L K + HD+DD+ +++L+ A +++++D +++E+ + L D L
Sbjct: 273 LIKHVLHDWDDDDVVRILRRIATAXKPD---SRLLVIDNLIDERP-----AASTLFVDLL 324
Query: 317 MMTCVPGIERSEKEWERLFFDAGFTSYKITP 347
++ V G ERSE E+ L +G + P
Sbjct: 325 LLVLVGGAERSESEFAALLEKSGLRVERSLP 355
>pdb|2IP2|A Chain A, Structure Of The Pyocyanin Biosynthetic Protein Phzm
pdb|2IP2|B Chain B, Structure Of The Pyocyanin Biosynthetic Protein Phzm
Length = 334
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 15/160 (9%)
Query: 197 SLVEVGGGTGSFARIISEAFPSIKCSVLELPHVI-------ADLPETDNLKFIAGDMNQS 249
S V+VGGG+G + I +A PS + +L+ + + L + + + GDM Q
Sbjct: 170 SFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQE 229
Query: 250 IPS-ADAFLFKLIFHDYDDEVCLKLLKNCREAVASSDGREKVIIVDIVVNEKKDKPEITE 308
+PS D +L I D D+ L+LL NCREA+A DGR V++++ ++ + P
Sbjct: 230 VPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMA-GDGR--VVVIERTISASEPSP---- 282
Query: 309 AKLLYDALMMTCVPGIERSEKEWERLFFDAGFTSYKITPL 348
+L+D + G R+ +E L GF +I L
Sbjct: 283 MSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVDL 322
>pdb|4A6D|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam
pdb|4A6E|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam And
N-Acetylserotonin
Length = 353
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Query: 198 LVEVGGGTGSFARIISEAFPSIKCSVLELPHVIA------DLPETDNLKFIAGD-MNQSI 250
+ ++GGG G+ A+ +P K +V ++P V+ E + + F GD +
Sbjct: 183 MCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL 242
Query: 251 PSADAFLFKLIFHDYDDEVCLKLLKNCREAVASSDGREKVIIVDIVVNEKKDKPEITEAK 310
P AD ++ + HD+ D C LL+ G +++++ +++E + P +T+
Sbjct: 243 PEADLYILARVLHDWADGKCSHLLERIYHTCKPGGG---ILVIESLLDEDRRGPLLTQ-- 297
Query: 311 LLYDALMMTCVPGIERSEKEWERLFFDAGFTSYKI 345
LY M+ G ER+ + L AGF ++
Sbjct: 298 -LYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQF 331
>pdb|1X19|A Chain A, Crystal Structure Of Bchu Involved In Bacteriochlorophyll
C Biosynthesis
pdb|1X1A|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Methionine
pdb|1X1B|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine
pdb|1X1C|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn2+
pdb|1X1D|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn-Bacteriopheophorbide D
Length = 359
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 97/191 (50%), Gaps = 32/191 (16%)
Query: 127 AFITPGHY--LSRWLRGN-----ELPDPFVTGHGINIWGYAEQNHEFNNLFNQGLASDSQ 179
AF+ Y LS+ +RG ++P P VT N+ Y E+ H N F
Sbjct: 130 AFLADDFYMGLSQAVRGQKNFKGQVPYPPVTRED-NL--YFEEIHRSNAKF--------- 177
Query: 180 MAKLIIKDCKHIFDGLSSLVEVGGGTGSFARIISEAFPSIKCSVLELPHVI-------AD 232
+L++++ K DG+ +++VGGG G + + + FP + ++L LP I A+
Sbjct: 178 AIQLLLEEAK--LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAE 235
Query: 233 LPETDNLKFIAGDM-NQSIPSADAFLFKLIFHDYDDEVCLKLLKNCREAVASSDGREKVI 291
D ++ IA D+ +S P ADA LF I + ++++ + K +A+ S GR ++
Sbjct: 236 KGVADRMRGIAVDIYKESYPEADAVLFCRILYSANEQLSTIMCKKAFDAMRSG-GR--LL 292
Query: 292 IVDIVVNEKKD 302
I+D+V+++ ++
Sbjct: 293 ILDMVIDDPEN 303
>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Methionine (Sam)
pdb|1R00|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Homocystein (Sah)
Length = 374
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 14/198 (7%)
Query: 152 HGINIWGYAEQNHEFNNLFNQGLASDSQMAKLIIKDCKHIFDGLSSLVEVGGGTGSFARI 211
+G W + + F+ ++ D +A D + + + +++VGGG G
Sbjct: 141 YGRPFWEDLSADVALADSFDALMSCDEDLAYEAPADA-YDWSAVRHVLDVGGGNGGMLAA 199
Query: 212 ISEAFPSIKCSVLELP-------HVIADLPETDNLKFIAGDMNQSIP-SADAFLFKLIFH 263
I+ P ++ +++EL AD D + GD + +P +AD L +
Sbjct: 200 IALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFVLL 259
Query: 264 DYDDEVCLKLLKNCREAVASSDGREKVIIVDIVVNEKKDKPEITEAKLLYDALMMTCVPG 323
++ DE L +L+ C A+ GR V+ V + D+ T L D M+T + G
Sbjct: 260 NWSDEDALTILRGCVRALEPG-GRLLVLDRADVEGDGADRFFST----LLDLRMLTFMGG 314
Query: 324 IERSEKEWERLFFDAGFT 341
R+ E L AG
Sbjct: 315 RVRTRDEVVDLAGSAGLA 332
>pdb|1TW2|A Chain A, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW2|B Chain B, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW3|A Chain A, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
pdb|1TW3|B Chain B, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
Length = 360
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 38/230 (16%)
Query: 142 NELPDPFVTGHGI-----------NIWGYAEQNHEFNNLF--NQGLASDSQMAKLIIKDC 188
LPD TG ++ G + F++L +Q +A D+ A +
Sbjct: 125 TRLPDAIRTGRPTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAAAYDWTNV 184
Query: 189 KHIFDGLSSLVEVGGGTGSFARIISEAFPSIKCSVLELPHVI-------ADLPETDNLKF 241
+H+ D VGGG G FA I+ P + +VLE+ + D +D +
Sbjct: 185 RHVLD-------VGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDV 237
Query: 242 IAGDMNQSIP-SADAFLFKLIFHDYDDEVCLKLLKNCREAVASSDGREKVIIVDIVVNEK 300
+ GD + +P ADA + + ++ D +++L C EA+ GR I+++E+
Sbjct: 238 VEGDFFEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPG-GR-------ILIHER 289
Query: 301 KDKPE--ITEAKLLYDALMMTCVPGIERSEKEWERLFFDAGFTSYKITPL 348
D E E D M+ + G R+ ++W+ L AG ++ L
Sbjct: 290 DDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQL 339
>pdb|3I53|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I53|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I58|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I58|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I5U|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I5U|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I64|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
pdb|3I64|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
Length = 332
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 11/118 (9%)
Query: 232 DLPETDNLKFIAGDMNQSIPS-ADAFLFKLIFHDYDDEVCLKLLKNCREAVASSDGREKV 290
D + + + G +P+ A ++ + HD+DD + +L+ C EA S V
Sbjct: 214 DTGLSGRAQVVVGSFFDPLPAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGG---VV 270
Query: 291 IIVDIVVNEKKDKPEITEAKLLYDALMMTCVPGIERSEKEWERLFFDAGFTSYKITPL 348
++++ V ++ A D M+T G ERS E L AG P+
Sbjct: 271 LVIEAVAGDE-------HAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHPI 321
>pdb|3R9X|B Chain B, Crystal Structure Of Era In Complex With Mggdpnp,
Nucleotides 1506- 1542 Of 16s Ribosomal Rna, And Ksga
Length = 248
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 196 SSLVEVGGGTGSFARIISEAFPSIKCSVLELPHVIADLPETDNLKFIAGDMNQSIPSADA 255
+++VEVGGGTG+ +++ + P K V+EL D +NLK I GD + + DA
Sbjct: 32 NTVVEVGGGTGNLTKVLLQ-HPLKKLYVIEL-----DREMVENLKSI-GDERLEVINEDA 84
Query: 256 FLF 258
F
Sbjct: 85 SKF 87
>pdb|3FTC|A Chain A, Crystal Structure Of A. Aeolicus Ksga At 1.72-Angstrom
Resolution
pdb|3FTD|A Chain A, Crystal Structure Of A. Aeolicus Ksga At 1.44-Angstrom
Resolution
pdb|3FTE|A Chain A, Crystal Structure Of A. Aeolicus Ksga In Complex With Rna
pdb|3FTF|A Chain A, Crystal Structure Of A. Aeolicus Ksga In Complex With Rna
And Sah
Length = 249
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 196 SSLVEVGGGTGSFARIISEAFPSIKCSVLELPHVIADLPETDNLKFIAGDMNQSIPSADA 255
+++VEVGGGTG+ +++ + P K V+EL D +NLK I GD + + DA
Sbjct: 33 NTVVEVGGGTGNLTKVLLQ-HPLKKLYVIEL-----DREMVENLKSI-GDERLEVINEDA 85
Query: 256 FLF 258
F
Sbjct: 86 SKF 88
>pdb|2J1O|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba
Length = 268
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 27/126 (21%)
Query: 237 DNLKFIAGDMNQSIPSADAFLFKLIFHDYDDEV-CLKLLKNCREAVASSDGREKVIIVDI 295
++LKFI ++ A A L +I D+E+ L+ C + +
Sbjct: 158 EHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARC---------------IGL 202
Query: 296 VVNEKKDKPEITEA-KLLYDALMMTCVPGIERSEKEWERLFFDA-----GFTSYKITPLL 349
+ D ++T A KL Y LM G+E+S + E+L +A GF S K+ PLL
Sbjct: 203 LFQVVDDILDVTIADKLTYPKLM-----GLEKSREFAEKLNTEARDQLLGFDSDKVAPLL 257
Query: 350 GLRSFI 355
L ++I
Sbjct: 258 ALANYI 263
>pdb|3NUQ|A Chain A, Structure Of A Putative Nucleotide Phosphatase From
Saccharomyces Cerevisiae
Length = 282
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 10/52 (19%)
Query: 182 KLIIKDCKHIFDGLSSLVEVGGGTGSFARIISEAFPSIKCSVLELPHVIADL 233
KL +K C H+ + + + E+ G T A +IS+ +LELPHV++DL
Sbjct: 240 KLGMKTCIHLVE--NEVNEILGQTPEGAIVISD--------ILELPHVVSDL 281
>pdb|3OPX|A Chain A, Crystal Structure Of Pyrimidine 5 -Nucleotidase Sdt1 From
Saccharomyces Cerevisiae Complexed With Uridine
5'-Monophosphate
Length = 263
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 10/52 (19%)
Query: 182 KLIIKDCKHIFDGLSSLVEVGGGTGSFARIISEAFPSIKCSVLELPHVIADL 233
KL +K C H+ + + + E+ G T A +IS+ +LELPHV++DL
Sbjct: 213 KLGMKTCIHLVE--NEVNEILGQTPEGAIVISD--------ILELPHVVSDL 254
>pdb|3ONN|A Chain A, Crystal Structure Of 5'-Nucleotidase Sdt1 From
Saccharomyces Cerevisiae
Length = 263
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 10/52 (19%)
Query: 182 KLIIKDCKHIFDGLSSLVEVGGGTGSFARIISEAFPSIKCSVLELPHVIADL 233
KL +K C H+ + + + E+ G T A +IS+ +LELPHV++DL
Sbjct: 213 KLGMKTCIHLVE--NEVNEILGQTPEGAIVISD--------ILELPHVVSDL 254
>pdb|1XDS|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDS|B Chain B, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDU|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With Sinefungin (Sfg)
Length = 374
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 217 PSIKCSVLELP-------HVIADLPETDNLKFIAGDMNQSIP-SADAFLFKLIFHDYDDE 268
P ++ +++EL AD D + GD + +P +AD L + ++ DE
Sbjct: 205 PHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFVLLNWSDE 264
Query: 269 VCLKLLKNCREAV 281
L +L+ C A+
Sbjct: 265 DALTILRGCVRAL 277
>pdb|4FLN|A Chain A, Crystal Structure Of Plant Protease Deg2
pdb|4FLN|B Chain B, Crystal Structure Of Plant Protease Deg2
pdb|4FLN|C Chain C, Crystal Structure Of Plant Protease Deg2
Length = 539
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 260 LIFHDYDDEVCLKLLKNCREAVASSDGREKVIIVDIVVNE 299
LI + +D + LKLL R +VA G + VI+ ++ NE
Sbjct: 387 LIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANE 426
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,739,627
Number of Sequences: 62578
Number of extensions: 443052
Number of successful extensions: 1023
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 968
Number of HSP's gapped (non-prelim): 32
length of query: 359
length of database: 14,973,337
effective HSP length: 100
effective length of query: 259
effective length of database: 8,715,537
effective search space: 2257324083
effective search space used: 2257324083
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)