Query 043626
Match_columns 291
No_of_seqs 340 out of 2512
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 11:19:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043626.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043626hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfg_A N-methyltransferase; N, 99.8 3.3E-19 1.1E-23 157.6 17.7 140 6-160 5-150 (263)
2 3ege_A Putative methyltransfer 99.8 1.4E-19 4.9E-24 160.3 15.0 153 14-188 4-177 (261)
3 3dlc_A Putative S-adenosyl-L-m 99.8 2.5E-19 8.4E-24 152.9 15.8 153 15-183 9-197 (219)
4 1vl5_A Unknown conserved prote 99.8 9.4E-20 3.2E-24 160.9 12.6 136 33-183 22-184 (260)
5 3h2b_A SAM-dependent methyltra 99.8 1.7E-20 5.8E-25 159.4 6.7 130 52-191 42-184 (203)
6 3l8d_A Methyltransferase; stru 99.8 8.7E-20 3E-24 158.8 11.2 163 3-183 8-194 (242)
7 3g5l_A Putative S-adenosylmeth 99.8 3.8E-19 1.3E-23 156.2 14.8 108 39-161 35-145 (253)
8 3e23_A Uncharacterized protein 99.8 2E-19 6.8E-24 153.8 12.1 141 52-204 44-199 (211)
9 3dli_A Methyltransferase; PSI- 99.8 1.5E-19 5.2E-24 157.8 11.5 135 35-183 27-178 (240)
10 3dtn_A Putative methyltransfer 99.8 3.2E-19 1.1E-23 154.8 13.5 136 12-161 7-148 (234)
11 3kkz_A Uncharacterized protein 99.8 1.3E-19 4.6E-24 160.6 10.3 162 13-190 10-197 (267)
12 3dh0_A SAM dependent methyltra 99.8 9.8E-19 3.4E-23 150.0 15.0 138 37-189 26-181 (219)
13 2p7i_A Hypothetical protein; p 99.8 4.7E-19 1.6E-23 154.0 12.8 151 13-183 11-193 (250)
14 3ujc_A Phosphoethanolamine N-m 99.8 8.6E-19 3E-23 154.3 14.3 136 35-183 42-200 (266)
15 4gek_A TRNA (CMO5U34)-methyltr 99.8 5.7E-19 1.9E-23 157.3 13.1 97 52-160 71-177 (261)
16 4hg2_A Methyltransferase type 99.8 3.8E-19 1.3E-23 158.1 11.8 139 18-177 13-153 (257)
17 3bus_A REBM, methyltransferase 99.8 2.2E-18 7.5E-23 152.9 16.7 141 28-183 41-210 (273)
18 1pjz_A Thiopurine S-methyltran 99.8 2.3E-19 7.9E-24 153.5 9.9 110 38-160 12-139 (203)
19 3ou2_A SAM-dependent methyltra 99.8 2.2E-19 7.5E-24 153.5 9.0 154 14-183 14-199 (218)
20 1xtp_A LMAJ004091AAA; SGPP, st 99.8 2.1E-18 7.1E-23 151.1 15.4 142 32-186 77-235 (254)
21 2o57_A Putative sarcosine dime 99.8 2.2E-18 7.7E-23 154.9 16.0 141 28-183 58-228 (297)
22 2yqz_A Hypothetical protein TT 99.8 1.8E-18 6E-23 152.2 14.1 129 18-161 7-141 (263)
23 1xxl_A YCGJ protein; structura 99.8 2.2E-18 7.5E-23 150.6 14.5 134 35-183 8-168 (239)
24 3ccf_A Cyclopropane-fatty-acyl 99.8 1.2E-18 4.2E-23 155.5 13.1 113 35-163 44-156 (279)
25 2p35_A Trans-aconitate 2-methy 99.8 1.2E-18 4E-23 153.2 12.6 124 20-162 8-133 (259)
26 3f4k_A Putative methyltransfer 99.8 5.2E-19 1.8E-23 155.4 10.0 150 20-184 17-191 (257)
27 4e2x_A TCAB9; kijanose, tetron 99.8 1.9E-19 6.4E-24 169.9 7.3 168 10-191 69-255 (416)
28 3g2m_A PCZA361.24; SAM-depende 99.8 3.9E-18 1.3E-22 153.8 15.6 174 13-202 49-287 (299)
29 1nkv_A Hypothetical protein YJ 99.8 2.2E-18 7.7E-23 151.2 13.6 135 35-185 23-183 (256)
30 3bkw_A MLL3908 protein, S-aden 99.8 2.1E-18 7.2E-23 150.0 13.3 108 39-161 34-144 (243)
31 3cgg_A SAM-dependent methyltra 99.8 2.6E-17 8.9E-22 137.6 19.3 122 52-183 47-169 (195)
32 3hnr_A Probable methyltransfer 99.8 1.1E-17 3.7E-22 143.6 16.1 131 39-183 36-195 (220)
33 1y8c_A S-adenosylmethionine-de 99.8 1.2E-18 4E-23 151.5 10.0 132 18-161 5-142 (246)
34 2gs9_A Hypothetical protein TT 99.8 1.4E-17 4.7E-22 142.2 16.0 131 14-164 2-135 (211)
35 4htf_A S-adenosylmethionine-de 99.8 5.7E-18 2E-22 151.5 14.1 121 52-183 69-226 (285)
36 3vc1_A Geranyl diphosphate 2-C 99.8 5.7E-18 2E-22 153.8 14.2 143 31-189 99-269 (312)
37 3jwh_A HEN1; methyltransferase 99.8 1.1E-17 3.8E-22 143.6 14.5 114 35-161 16-141 (217)
38 3sm3_A SAM-dependent methyltra 99.8 6.2E-18 2.1E-22 145.9 12.8 123 52-183 31-201 (235)
39 2ex4_A Adrenal gland protein A 99.8 1.3E-17 4.6E-22 145.5 14.8 127 52-188 80-224 (241)
40 3i9f_A Putative type 11 methyl 99.8 3.9E-18 1.3E-22 140.7 10.6 130 39-188 8-147 (170)
41 3bxo_A N,N-dimethyltransferase 99.8 8.7E-18 3E-22 145.6 13.3 133 14-161 3-141 (239)
42 3jwg_A HEN1, methyltransferase 99.7 3.3E-17 1.1E-21 140.7 16.5 115 34-161 15-141 (219)
43 3lcc_A Putative methyl chlorid 99.7 8.7E-18 3E-22 146.0 12.9 127 52-189 67-207 (235)
44 1kpg_A CFA synthase;, cyclopro 99.7 3.2E-17 1.1E-21 146.6 16.4 119 28-162 44-169 (287)
45 3hem_A Cyclopropane-fatty-acyl 99.7 2.6E-17 8.8E-22 148.6 15.9 125 29-162 53-184 (302)
46 4fsd_A Arsenic methyltransfera 99.7 1.2E-17 4.2E-22 156.3 13.6 122 52-184 84-246 (383)
47 3e8s_A Putative SAM dependent 99.7 5.9E-18 2E-22 145.1 10.2 137 36-188 40-208 (227)
48 2gb4_A Thiopurine S-methyltran 99.7 1.4E-17 4.9E-22 147.5 12.8 99 52-160 69-190 (252)
49 2a14_A Indolethylamine N-methy 99.7 1.5E-17 5.2E-22 147.7 12.7 130 52-188 56-237 (263)
50 2fk8_A Methoxy mycolic acid sy 99.7 1E-16 3.5E-21 145.6 17.2 119 28-162 70-195 (318)
51 3mti_A RRNA methylase; SAM-dep 99.7 4.5E-17 1.5E-21 136.3 13.6 127 52-180 23-157 (185)
52 2i62_A Nicotinamide N-methyltr 99.7 2.3E-17 7.7E-22 145.2 12.3 131 52-189 57-239 (265)
53 3mgg_A Methyltransferase; NYSG 99.7 2.6E-17 8.8E-22 146.3 11.7 98 52-161 38-142 (276)
54 3iv6_A Putative Zn-dependent a 99.7 9.8E-17 3.3E-21 142.7 15.2 132 35-180 32-167 (261)
55 2g72_A Phenylethanolamine N-me 99.7 2E-17 6.7E-22 148.5 10.3 146 36-189 57-256 (289)
56 3ofk_A Nodulation protein S; N 99.7 6.6E-17 2.2E-21 138.4 12.8 114 35-161 38-154 (216)
57 3thr_A Glycine N-methyltransfe 99.7 6.5E-18 2.2E-22 151.4 6.5 145 10-162 18-176 (293)
58 3gu3_A Methyltransferase; alph 99.7 1.2E-16 4.2E-21 143.1 14.7 111 36-161 9-126 (284)
59 1xdz_A Methyltransferase GIDB; 99.7 1.7E-16 5.7E-21 138.9 14.4 137 52-204 71-217 (240)
60 3e05_A Precorrin-6Y C5,15-meth 99.7 8.6E-16 2.9E-20 130.6 18.3 128 35-182 27-161 (204)
61 3g07_A 7SK snRNA methylphospha 99.7 3E-17 1E-21 148.1 9.2 131 52-187 47-267 (292)
62 3cc8_A Putative methyltransfer 99.7 1.7E-16 6E-21 136.1 13.5 129 38-183 23-179 (230)
63 2avn_A Ubiquinone/menaquinone 99.7 3.4E-16 1.1E-20 138.3 14.9 128 18-163 23-154 (260)
64 3g5t_A Trans-aconitate 3-methy 99.7 1.9E-16 6.3E-21 142.8 13.4 109 35-160 24-148 (299)
65 2xvm_A Tellurite resistance pr 99.7 1.9E-16 6.6E-21 133.2 12.4 109 39-161 23-136 (199)
66 2p8j_A S-adenosylmethionine-de 99.7 1.6E-16 5.6E-21 135.0 12.0 102 52-163 24-130 (209)
67 3bkx_A SAM-dependent methyltra 99.7 2.2E-16 7.7E-21 140.0 13.0 120 29-162 24-160 (275)
68 3d2l_A SAM-dependent methyltra 99.7 2.7E-16 9.3E-21 136.5 13.2 129 15-161 4-137 (243)
69 3evz_A Methyltransferase; NYSG 99.7 1.1E-15 3.6E-20 132.2 16.8 136 52-189 56-205 (230)
70 1ve3_A Hypothetical protein PH 99.7 3.5E-16 1.2E-20 134.5 12.8 101 52-162 39-143 (227)
71 3hm2_A Precorrin-6Y C5,15-meth 99.7 9.5E-16 3.2E-20 126.8 15.0 130 33-183 10-147 (178)
72 1vlm_A SAM-dependent methyltra 99.7 4.5E-16 1.6E-20 133.9 13.4 114 52-183 48-182 (219)
73 1ri5_A MRNA capping enzyme; me 99.7 4E-16 1.4E-20 139.5 13.3 103 52-162 65-175 (298)
74 3q87_B N6 adenine specific DNA 99.7 3.5E-16 1.2E-20 130.0 11.9 120 52-183 24-143 (170)
75 3m33_A Uncharacterized protein 99.7 1E-16 3.4E-21 138.9 9.0 112 52-183 49-161 (226)
76 1dus_A MJ0882; hypothetical pr 99.7 1.8E-15 6.3E-20 126.2 16.3 131 35-183 39-176 (194)
77 3njr_A Precorrin-6Y methylase; 99.7 2.2E-15 7.7E-20 128.8 17.1 127 35-183 42-174 (204)
78 3lpm_A Putative methyltransfer 99.7 5.4E-16 1.9E-20 137.2 13.3 149 52-203 50-216 (259)
79 2aot_A HMT, histamine N-methyl 99.7 6.8E-17 2.3E-21 145.4 7.2 120 52-183 53-215 (292)
80 2pxx_A Uncharacterized protein 99.7 8.8E-16 3E-20 130.5 13.6 112 52-164 43-162 (215)
81 3m70_A Tellurite resistance pr 99.7 3.2E-16 1.1E-20 140.2 11.2 109 39-161 111-223 (286)
82 3eey_A Putative rRNA methylase 99.7 6.9E-16 2.4E-20 130.3 12.5 127 52-180 23-161 (197)
83 1zx0_A Guanidinoacetate N-meth 99.7 9.5E-17 3.3E-21 139.9 7.1 139 33-183 46-204 (236)
84 1wzn_A SAM-dependent methyltra 99.7 1.3E-15 4.6E-20 133.2 13.9 113 35-161 28-145 (252)
85 3ocj_A Putative exported prote 99.7 5.6E-16 1.9E-20 140.2 11.8 122 52-183 119-285 (305)
86 3orh_A Guanidinoacetate N-meth 99.6 1.1E-16 3.7E-21 140.1 6.2 154 14-183 19-204 (236)
87 3grz_A L11 mtase, ribosomal pr 99.6 6.3E-16 2.1E-20 131.5 10.6 113 52-183 61-179 (205)
88 3ggd_A SAM-dependent methyltra 99.6 2.8E-16 9.7E-21 137.1 8.4 102 52-163 57-165 (245)
89 1l3i_A Precorrin-6Y methyltran 99.6 1.9E-15 6.4E-20 125.9 12.9 129 35-183 20-154 (192)
90 1yzh_A TRNA (guanine-N(7)-)-me 99.6 3E-15 1E-19 128.4 14.2 125 52-183 42-176 (214)
91 4df3_A Fibrillarin-like rRNA/T 99.6 9.3E-15 3.2E-19 127.7 17.2 150 35-203 61-229 (233)
92 1nt2_A Fibrillarin-like PRE-rR 99.6 8.6E-15 2.9E-19 125.9 16.7 132 52-202 58-206 (210)
93 3bgv_A MRNA CAP guanine-N7 met 99.6 1.2E-15 4.1E-20 138.4 11.9 123 32-163 16-157 (313)
94 2vdw_A Vaccinia virus capping 99.6 2.3E-15 7.8E-20 136.7 13.7 103 52-162 49-170 (302)
95 2ozv_A Hypothetical protein AT 99.6 3.8E-15 1.3E-19 132.1 14.0 149 52-204 37-210 (260)
96 3lbf_A Protein-L-isoaspartate 99.6 1.9E-15 6.4E-20 128.9 11.5 109 34-163 63-176 (210)
97 2zfu_A Nucleomethylin, cerebra 99.6 2.8E-15 9.7E-20 128.2 12.5 117 39-183 57-173 (215)
98 2qe6_A Uncharacterized protein 99.6 1E-14 3.5E-19 130.5 16.3 122 32-164 60-199 (274)
99 2yxd_A Probable cobalt-precorr 99.6 7.8E-15 2.7E-19 121.4 14.4 125 35-183 22-151 (183)
100 3g89_A Ribosomal RNA small sub 99.6 2.4E-15 8.1E-20 132.9 11.3 137 52-204 81-227 (249)
101 3p9n_A Possible methyltransfer 99.6 1.7E-15 6E-20 127.3 9.9 102 52-163 45-155 (189)
102 3hp7_A Hemolysin, putative; st 99.6 3.6E-15 1.2E-19 134.4 12.2 150 37-203 73-248 (291)
103 1fbn_A MJ fibrillarin homologu 99.6 3.3E-15 1.1E-19 129.8 11.5 136 36-189 59-213 (230)
104 2kw5_A SLR1183 protein; struct 99.6 2.6E-15 8.7E-20 127.1 9.9 98 52-162 31-132 (202)
105 1vbf_A 231AA long hypothetical 99.6 3.8E-15 1.3E-19 128.8 11.1 110 34-164 56-168 (231)
106 2fca_A TRNA (guanine-N(7)-)-me 99.6 6.7E-15 2.3E-19 126.6 12.5 125 52-183 39-173 (213)
107 2b3t_A Protein methyltransfera 99.6 8E-15 2.7E-19 130.8 12.9 142 33-183 95-257 (276)
108 3id6_C Fibrillarin-like rRNA/T 99.6 2.8E-14 9.7E-19 124.7 15.9 144 32-192 57-220 (232)
109 3dxy_A TRNA (guanine-N(7)-)-me 99.6 3.5E-15 1.2E-19 129.1 9.8 120 52-178 35-165 (218)
110 3htx_A HEN1; HEN1, small RNA m 99.6 9E-15 3.1E-19 146.3 14.0 115 33-161 706-834 (950)
111 3bzb_A Uncharacterized protein 99.6 8.9E-15 3E-19 131.2 12.4 135 35-183 66-231 (281)
112 2r3s_A Uncharacterized protein 99.6 1.8E-14 6.1E-19 131.4 14.7 140 35-189 150-323 (335)
113 4dzr_A Protein-(glutamine-N5) 99.6 2.8E-16 9.5E-21 133.5 2.0 143 34-183 15-186 (215)
114 3bwc_A Spermidine synthase; SA 99.6 1.6E-14 5.4E-19 131.1 13.8 123 52-183 96-234 (304)
115 3mq2_A 16S rRNA methyltransfer 99.6 5.5E-15 1.9E-19 126.8 10.0 129 39-183 18-178 (218)
116 2nxc_A L11 mtase, ribosomal pr 99.6 5.4E-15 1.8E-19 130.7 9.3 114 52-183 121-238 (254)
117 3ckk_A TRNA (guanine-N(7)-)-me 99.6 1.9E-14 6.4E-19 126.0 12.5 122 52-180 47-185 (235)
118 1ej0_A FTSJ; methyltransferase 99.6 1.6E-14 5.5E-19 118.3 11.1 143 39-194 12-165 (180)
119 3i53_A O-methyltransferase; CO 99.6 3.2E-14 1.1E-18 130.1 13.6 123 52-187 170-319 (332)
120 1jsx_A Glucose-inhibited divis 99.6 2E-14 6.9E-19 122.0 11.3 127 35-183 49-182 (207)
121 1yb2_A Hypothetical protein TA 99.5 1.4E-14 4.8E-19 129.2 10.4 125 36-183 98-231 (275)
122 3dmg_A Probable ribosomal RNA 99.5 4.8E-14 1.6E-18 132.0 14.0 124 33-165 216-344 (381)
123 2esr_A Methyltransferase; stru 99.5 6.5E-15 2.2E-19 122.2 7.2 115 35-164 17-141 (177)
124 3adn_A Spermidine synthase; am 99.5 7.7E-14 2.6E-18 126.1 14.8 145 52-206 84-244 (294)
125 2ipx_A RRNA 2'-O-methyltransfe 99.5 2.7E-14 9.3E-19 124.0 11.3 119 52-183 78-211 (233)
126 2fyt_A Protein arginine N-meth 99.5 2.5E-14 8.7E-19 131.8 11.7 109 37-158 53-168 (340)
127 2pwy_A TRNA (adenine-N(1)-)-me 99.5 3.8E-14 1.3E-18 124.2 12.2 126 36-183 84-218 (258)
128 2ift_A Putative methylase HI07 99.5 6.2E-15 2.1E-19 125.7 6.8 102 52-165 54-167 (201)
129 1p91_A Ribosomal RNA large sub 99.5 5.2E-14 1.8E-18 124.5 13.0 93 52-163 86-180 (269)
130 3mb5_A SAM-dependent methyltra 99.5 9.7E-14 3.3E-18 121.8 14.5 129 36-187 81-220 (255)
131 2yxe_A Protein-L-isoaspartate 99.5 2.5E-14 8.6E-19 122.2 10.4 110 34-164 63-180 (215)
132 3gwz_A MMCR; methyltransferase 99.5 2.1E-13 7.3E-18 126.7 17.5 138 35-188 189-355 (369)
133 1qzz_A RDMB, aclacinomycin-10- 99.5 1.1E-13 3.9E-18 128.2 15.4 136 38-189 172-339 (374)
134 3opn_A Putative hemolysin; str 99.5 4.9E-15 1.7E-19 129.5 5.7 131 37-183 25-178 (232)
135 3uwp_A Histone-lysine N-methyl 99.5 2.2E-14 7.7E-19 134.3 10.3 114 31-160 156-287 (438)
136 3r0q_C Probable protein argini 99.5 1.9E-14 6.4E-19 134.4 9.6 109 38-160 53-168 (376)
137 1o9g_A RRNA methyltransferase; 99.5 5.3E-14 1.8E-18 123.5 11.8 126 31-161 34-214 (250)
138 2plw_A Ribosomal RNA methyltra 99.5 5.3E-14 1.8E-18 118.9 11.3 122 52-183 23-173 (201)
139 3dp7_A SAM-dependent methyltra 99.5 7.5E-14 2.6E-18 129.5 13.2 121 52-183 180-336 (363)
140 2fpo_A Methylase YHHF; structu 99.5 1.3E-14 4.3E-19 123.9 7.3 114 35-163 40-162 (202)
141 1ws6_A Methyltransferase; stru 99.5 2.9E-15 9.9E-20 122.9 3.2 101 52-165 42-151 (171)
142 3fpf_A Mtnas, putative unchara 99.5 1.2E-13 4.1E-18 124.5 13.8 107 36-162 110-223 (298)
143 3dou_A Ribosomal RNA large sub 99.5 5.5E-14 1.9E-18 119.2 10.8 155 40-206 16-181 (191)
144 1i9g_A Hypothetical protein RV 99.5 1.9E-13 6.5E-18 121.5 14.5 130 35-186 86-227 (280)
145 3reo_A (ISO)eugenol O-methyltr 99.5 1.6E-13 5.6E-18 127.5 14.4 134 37-188 191-354 (368)
146 3ntv_A MW1564 protein; rossman 99.5 6.8E-15 2.3E-19 128.1 4.6 108 36-160 59-175 (232)
147 1x19_A CRTF-related protein; m 99.5 2.1E-13 7.1E-18 126.1 14.9 139 35-189 177-348 (359)
148 1g8a_A Fibrillarin-like PRE-rR 99.5 2.4E-13 8.2E-18 117.3 14.1 98 52-162 74-179 (227)
149 1dl5_A Protein-L-isoaspartate 99.5 4.2E-14 1.4E-18 128.9 9.6 108 35-163 62-177 (317)
150 1fp1_D Isoliquiritigenin 2'-O- 99.5 1.4E-13 4.8E-18 127.9 12.9 134 37-188 197-359 (372)
151 2frn_A Hypothetical protein PH 99.5 8.2E-14 2.8E-18 124.8 10.9 115 52-183 126-251 (278)
152 4dcm_A Ribosomal RNA large sub 99.5 1.2E-13 4E-18 129.1 12.2 117 37-164 211-337 (375)
153 3q7e_A Protein arginine N-meth 99.5 3.1E-14 1.1E-18 131.6 8.1 98 52-159 67-171 (349)
154 3mcz_A O-methyltransferase; ad 99.5 5E-14 1.7E-18 129.6 9.5 133 39-183 169-333 (352)
155 1ne2_A Hypothetical protein TA 99.5 4.7E-13 1.6E-17 113.2 14.7 110 52-180 52-162 (200)
156 2fhp_A Methylase, putative; al 99.5 3.8E-14 1.3E-18 118.0 7.8 116 35-164 30-157 (187)
157 2pbf_A Protein-L-isoaspartate 99.5 6.9E-14 2.4E-18 120.6 9.6 108 36-163 66-195 (227)
158 3p9c_A Caffeic acid O-methyltr 99.5 2.1E-13 7.3E-18 126.6 13.6 134 36-187 188-351 (364)
159 3giw_A Protein of unknown func 99.5 5.9E-13 2E-17 118.7 15.5 139 33-181 62-222 (277)
160 1tw3_A COMT, carminomycin 4-O- 99.5 2.1E-13 7.2E-18 125.9 13.1 135 38-188 173-338 (360)
161 1nv8_A HEMK protein; class I a 99.5 1.3E-13 4.6E-18 123.9 11.4 123 35-164 110-252 (284)
162 2bm8_A Cephalosporin hydroxyla 99.5 8.4E-14 2.9E-18 121.8 9.8 96 52-161 82-187 (236)
163 2wa2_A Non-structural protein 99.5 9.2E-14 3.1E-18 124.6 10.2 142 52-206 83-235 (276)
164 3p2e_A 16S rRNA methylase; met 99.5 1E-13 3.6E-18 120.4 10.1 125 52-183 25-179 (225)
165 2ld4_A Anamorsin; methyltransf 99.5 2.1E-14 7.3E-19 119.1 5.5 104 52-181 13-128 (176)
166 3gdh_A Trimethylguanosine synt 99.5 1.6E-15 5.3E-20 132.2 -1.6 96 52-160 79-180 (241)
167 1af7_A Chemotaxis receptor met 99.5 1.1E-13 3.8E-18 123.9 10.4 100 52-161 106-252 (274)
168 3u81_A Catechol O-methyltransf 99.5 2.8E-14 9.5E-19 123.0 6.3 99 52-162 59-171 (221)
169 3lst_A CALO1 methyltransferase 99.5 3.3E-13 1.1E-17 124.4 13.8 131 37-186 173-333 (348)
170 1jg1_A PIMT;, protein-L-isoasp 99.5 1E-13 3.6E-18 120.5 9.4 109 34-164 77-192 (235)
171 1i1n_A Protein-L-isoaspartate 99.5 1.9E-13 6.3E-18 117.8 10.8 108 36-164 63-185 (226)
172 1inl_A Spermidine synthase; be 99.5 2.7E-13 9.2E-18 122.6 12.2 123 52-183 91-228 (296)
173 2vdv_E TRNA (guanine-N(7)-)-me 99.5 4.9E-13 1.7E-17 117.2 13.5 124 52-180 50-190 (246)
174 1o54_A SAM-dependent O-methylt 99.5 4.1E-13 1.4E-17 119.7 13.2 124 37-183 101-233 (277)
175 2b25_A Hypothetical protein; s 99.5 3.2E-13 1.1E-17 123.8 12.6 125 36-181 93-237 (336)
176 2oxt_A Nucleoside-2'-O-methylt 99.5 1.7E-13 6E-18 122.0 10.5 102 52-163 75-187 (265)
177 2y1w_A Histone-arginine methyl 99.5 2.1E-13 7E-18 126.0 10.7 110 36-160 38-154 (348)
178 1ixk_A Methyltransferase; open 99.5 5.6E-13 1.9E-17 121.5 13.4 146 33-182 103-268 (315)
179 3tma_A Methyltransferase; thum 99.5 2.1E-13 7.1E-18 126.1 10.5 123 33-162 188-318 (354)
180 3fzg_A 16S rRNA methylase; met 99.5 6.3E-14 2.2E-18 118.3 6.1 108 34-159 37-150 (200)
181 2ip2_A Probable phenazine-spec 99.4 8.9E-13 3.1E-17 120.4 14.3 133 37-186 157-319 (334)
182 3dr5_A Putative O-methyltransf 99.4 1.5E-13 5.3E-18 119.0 8.7 112 32-160 40-162 (221)
183 1iy9_A Spermidine synthase; ro 99.4 7.3E-13 2.5E-17 118.5 13.3 124 52-183 76-212 (275)
184 2igt_A SAM dependent methyltra 99.4 2.3E-13 7.9E-18 125.0 10.3 144 35-182 139-297 (332)
185 1u2z_A Histone-lysine N-methyl 99.4 3.4E-13 1.2E-17 127.8 11.7 111 35-160 229-358 (433)
186 3kr9_A SAM-dependent methyltra 99.4 3E-13 1E-17 117.6 10.2 131 52-204 16-155 (225)
187 1r18_A Protein-L-isoaspartate( 99.4 2E-13 6.8E-18 118.0 9.0 107 35-163 69-196 (227)
188 2pt6_A Spermidine synthase; tr 99.4 4.8E-13 1.7E-17 122.3 11.8 122 52-183 117-253 (321)
189 3tfw_A Putative O-methyltransf 99.4 2.5E-13 8.7E-18 119.4 9.5 95 52-160 64-169 (248)
190 1fp2_A Isoflavone O-methyltran 99.4 6.8E-13 2.3E-17 122.4 12.7 117 52-183 189-335 (352)
191 2nyu_A Putative ribosomal RNA 99.4 2.8E-13 9.5E-18 113.8 9.3 123 52-183 23-164 (196)
192 1g6q_1 HnRNP arginine N-methyl 99.4 4.2E-13 1.5E-17 122.9 11.2 109 38-159 28-143 (328)
193 2yvl_A TRMI protein, hypotheti 99.4 1.1E-12 3.8E-17 114.1 13.2 124 37-183 80-209 (248)
194 2gpy_A O-methyltransferase; st 99.4 9.7E-14 3.3E-18 120.4 6.0 109 35-160 41-159 (233)
195 2pjd_A Ribosomal RNA small sub 99.4 2.3E-13 7.8E-18 125.4 8.7 117 36-164 184-306 (343)
196 3lec_A NADB-rossmann superfami 99.4 8.4E-13 2.9E-17 115.0 11.4 132 52-204 22-161 (230)
197 3tr6_A O-methyltransferase; ce 99.4 1.4E-13 4.6E-18 118.5 6.1 95 52-160 65-173 (225)
198 1mjf_A Spermidine synthase; sp 99.4 6.9E-13 2.3E-17 119.0 10.8 121 52-183 76-216 (281)
199 2i7c_A Spermidine synthase; tr 99.4 1.6E-12 5.4E-17 116.8 13.1 128 43-183 73-215 (283)
200 1uir_A Polyamine aminopropyltr 99.4 6E-13 2E-17 121.3 10.3 125 52-183 78-219 (314)
201 2h00_A Methyltransferase 10 do 99.4 4E-12 1.4E-16 111.5 15.3 148 52-203 66-250 (254)
202 1wy7_A Hypothetical protein PH 99.4 1E-11 3.5E-16 105.3 16.9 115 52-183 50-169 (207)
203 2p41_A Type II methyltransfera 99.4 9.6E-13 3.3E-17 119.5 11.1 127 52-192 83-220 (305)
204 3duw_A OMT, O-methyltransferas 99.4 2.6E-13 8.9E-18 116.7 6.9 95 52-160 59-166 (223)
205 4azs_A Methyltransferase WBDD; 99.4 1E-13 3.5E-18 136.1 4.9 99 52-159 67-171 (569)
206 3sso_A Methyltransferase; macr 99.4 9.3E-14 3.2E-18 129.7 4.2 123 17-160 185-323 (419)
207 3gjy_A Spermidine synthase; AP 99.4 1.5E-12 5E-17 118.6 11.9 130 52-189 90-228 (317)
208 3gnl_A Uncharacterized protein 99.4 1.1E-12 3.7E-17 115.2 10.3 131 52-204 22-161 (244)
209 3c3p_A Methyltransferase; NP_9 99.4 8.2E-14 2.8E-18 118.9 2.9 94 52-160 57-159 (210)
210 2o07_A Spermidine synthase; st 99.4 1.8E-12 6.1E-17 117.7 11.7 124 52-183 96-232 (304)
211 2qm3_A Predicted methyltransfe 99.4 1.1E-11 3.8E-16 115.4 16.8 119 52-183 173-303 (373)
212 3b3j_A Histone-arginine methyl 99.4 9.1E-13 3.1E-17 126.8 9.7 111 35-160 145-262 (480)
213 1zq9_A Probable dimethyladenos 99.4 2.4E-12 8.3E-17 115.7 11.8 86 35-126 15-106 (285)
214 2hnk_A SAM-dependent O-methylt 99.4 7.1E-13 2.4E-17 115.5 7.9 96 52-161 61-181 (239)
215 4a6d_A Hydroxyindole O-methylt 99.4 4.8E-12 1.6E-16 117.0 13.4 131 37-183 168-328 (353)
216 1zg3_A Isoflavanone 4'-O-methy 99.4 2.6E-12 8.7E-17 118.8 11.6 120 52-186 194-344 (358)
217 2b2c_A Spermidine synthase; be 99.4 2.3E-12 7.7E-17 117.5 11.0 122 52-183 109-245 (314)
218 3tm4_A TRNA (guanine N2-)-meth 99.4 1.9E-12 6.4E-17 120.7 10.6 136 33-183 203-346 (373)
219 3a27_A TYW2, uncharacterized p 99.4 2.6E-12 8.8E-17 114.7 10.5 110 52-178 120-239 (272)
220 1sui_A Caffeoyl-COA O-methyltr 99.4 5.3E-13 1.8E-17 117.5 5.7 95 52-160 80-189 (247)
221 1uwv_A 23S rRNA (uracil-5-)-me 99.3 4.5E-11 1.5E-15 113.5 18.6 131 32-183 270-408 (433)
222 1xj5_A Spermidine synthase 1; 99.3 7.3E-12 2.5E-16 115.1 12.8 124 52-183 121-258 (334)
223 2yxl_A PH0851 protein, 450AA l 99.3 1E-11 3.5E-16 118.5 13.6 147 33-182 244-412 (450)
224 1sqg_A SUN protein, FMU protei 99.3 1.3E-11 4.5E-16 117.0 14.0 142 32-178 230-392 (429)
225 3ajd_A Putative methyltransfer 99.3 3.5E-12 1.2E-16 113.8 9.3 122 38-163 73-213 (274)
226 3r3h_A O-methyltransferase, SA 99.3 2E-13 6.8E-18 119.9 1.1 95 52-160 61-169 (242)
227 4dmg_A Putative uncharacterize 99.3 3.5E-12 1.2E-16 119.7 9.0 130 52-183 215-351 (393)
228 2xyq_A Putative 2'-O-methyl tr 99.3 7.7E-12 2.6E-16 112.7 10.8 118 52-183 64-191 (290)
229 2b78_A Hypothetical protein SM 99.3 3.9E-12 1.3E-16 119.0 9.2 129 52-182 213-355 (385)
230 4hc4_A Protein arginine N-meth 99.3 4.2E-12 1.4E-16 118.3 9.3 97 52-159 84-187 (376)
231 2cmg_A Spermidine synthase; tr 99.3 3.2E-11 1.1E-15 107.1 14.1 111 52-183 73-194 (262)
232 3c3y_A Pfomt, O-methyltransfer 99.3 2.6E-12 9E-17 112.2 6.6 96 52-161 71-181 (237)
233 3cbg_A O-methyltransferase; cy 99.3 1.3E-12 4.6E-17 113.6 3.9 95 52-160 73-181 (232)
234 2avd_A Catechol-O-methyltransf 99.3 2.8E-12 9.5E-17 110.5 5.6 95 52-160 70-178 (229)
235 2h1r_A Dimethyladenosine trans 99.3 2.9E-11 9.9E-16 109.4 11.7 86 35-126 29-119 (299)
236 3gru_A Dimethyladenosine trans 99.3 4.2E-11 1.4E-15 108.1 12.7 87 35-125 37-126 (295)
237 2frx_A Hypothetical protein YE 99.3 5E-11 1.7E-15 114.6 13.9 127 33-163 100-248 (479)
238 3v97_A Ribosomal RNA large sub 99.2 8.9E-12 3.1E-16 125.0 8.4 128 52-182 540-675 (703)
239 3c0k_A UPF0064 protein YCCW; P 99.2 1.9E-11 6.3E-16 114.7 10.0 130 52-183 221-364 (396)
240 2f8l_A Hypothetical protein LM 99.2 2.6E-11 8.9E-16 111.6 10.7 136 52-190 131-286 (344)
241 2ih2_A Modification methylase 99.2 5.5E-11 1.9E-15 111.7 12.5 138 35-181 26-186 (421)
242 3frh_A 16S rRNA methylase; met 99.2 7.9E-11 2.7E-15 102.8 11.7 95 52-159 106-204 (253)
243 1wxx_A TT1595, hypothetical pr 99.2 1.8E-11 6.1E-16 114.3 8.2 130 52-183 210-350 (382)
244 3m6w_A RRNA methylase; rRNA me 99.2 4.7E-12 1.6E-16 121.0 4.3 132 33-167 86-235 (464)
245 2yx1_A Hypothetical protein MJ 99.2 3.1E-11 1.1E-15 110.9 8.9 108 52-182 196-310 (336)
246 3m4x_A NOL1/NOP2/SUN family pr 99.2 2.7E-11 9.1E-16 115.6 8.7 140 33-181 90-255 (456)
247 3lcv_B Sisomicin-gentamicin re 99.2 4.2E-11 1.4E-15 105.6 9.0 120 52-183 133-266 (281)
248 2as0_A Hypothetical protein PH 99.2 2.4E-11 8.1E-16 114.0 7.3 129 52-182 218-359 (396)
249 2jjq_A Uncharacterized RNA met 99.1 6.3E-10 2.1E-14 105.4 15.3 107 34-163 279-389 (425)
250 1yub_A Ermam, rRNA methyltrans 99.1 4.7E-13 1.6E-17 117.4 -6.3 82 35-121 16-101 (245)
251 3k6r_A Putative transferase PH 99.1 1.7E-10 5.7E-15 103.3 10.0 115 52-183 126-251 (278)
252 3tqs_A Ribosomal RNA small sub 99.1 5.4E-10 1.9E-14 98.8 12.7 84 35-123 16-106 (255)
253 1qam_A ERMC' methyltransferase 99.1 4.9E-10 1.7E-14 98.3 12.2 85 35-124 17-105 (244)
254 3fut_A Dimethyladenosine trans 99.1 4.2E-10 1.4E-14 100.4 10.1 84 35-123 34-120 (271)
255 2efj_A 3,7-dimethylxanthine me 99.1 2.2E-09 7.7E-14 100.0 15.1 130 52-181 53-253 (384)
256 3b5i_A S-adenosyl-L-methionine 99.1 9.3E-10 3.2E-14 102.3 11.7 145 20-164 15-228 (374)
257 3evf_A RNA-directed RNA polyme 99.0 2.4E-09 8.2E-14 94.8 12.7 130 52-194 75-214 (277)
258 1m6e_X S-adenosyl-L-methionnin 99.0 1.6E-09 5.5E-14 100.1 11.9 146 18-164 13-212 (359)
259 2okc_A Type I restriction enzy 99.0 1.1E-09 3.8E-14 104.2 11.0 150 35-191 158-339 (445)
260 2qfm_A Spermine synthase; sper 99.0 1.1E-09 3.7E-14 101.1 10.6 125 52-183 189-336 (364)
261 3k0b_A Predicted N6-adenine-sp 99.0 2.1E-09 7E-14 100.8 10.4 117 33-162 186-351 (393)
262 3ldu_A Putative methylase; str 99.0 1.8E-09 6.2E-14 100.9 9.9 118 33-162 180-345 (385)
263 3bt7_A TRNA (uracil-5-)-methyl 98.9 6.7E-09 2.3E-13 96.4 12.8 108 33-161 199-326 (369)
264 3ldg_A Putative uncharacterize 98.9 4.4E-09 1.5E-13 98.3 11.4 118 33-162 179-344 (384)
265 3ftd_A Dimethyladenosine trans 98.9 7.5E-09 2.6E-13 91.1 12.3 83 35-122 18-104 (249)
266 3uzu_A Ribosomal RNA small sub 98.9 4.9E-09 1.7E-13 93.9 11.0 83 35-121 29-122 (279)
267 2b9e_A NOL1/NOP2/SUN domain fa 98.9 5.7E-09 1.9E-13 94.8 9.4 130 33-166 87-239 (309)
268 2ar0_A M.ecoki, type I restric 98.9 5.3E-09 1.8E-13 101.9 9.2 153 35-191 156-344 (541)
269 2dul_A N(2),N(2)-dimethylguano 98.8 4.5E-09 1.5E-13 98.0 7.5 94 52-160 48-163 (378)
270 3gcz_A Polyprotein; flavivirus 98.8 1.4E-08 4.8E-13 90.0 10.1 134 52-194 91-231 (282)
271 2r6z_A UPF0341 protein in RSP 98.8 1.8E-09 6.1E-14 95.6 3.1 74 52-125 84-173 (258)
272 1qyr_A KSGA, high level kasuga 98.8 7.1E-09 2.4E-13 91.5 6.9 82 35-122 8-99 (252)
273 1m6y_A S-adenosyl-methyltransf 98.8 5.2E-09 1.8E-13 94.7 5.9 81 36-120 14-105 (301)
274 3o4f_A Spermidine synthase; am 98.7 4.5E-07 1.5E-11 81.4 17.2 124 52-183 84-221 (294)
275 3axs_A Probable N(2),N(2)-dime 98.7 2E-08 6.7E-13 94.0 8.0 95 52-161 53-158 (392)
276 3eld_A Methyltransferase; flav 98.7 2E-07 6.7E-12 83.2 13.9 134 52-194 82-221 (300)
277 3khk_A Type I restriction-modi 98.7 3.9E-08 1.3E-12 95.8 10.2 152 35-191 232-428 (544)
278 3lkd_A Type I restriction-modi 98.7 1.7E-07 5.7E-12 91.2 14.4 154 36-192 205-391 (542)
279 2oyr_A UPF0341 protein YHIQ; a 98.7 1.8E-08 6.2E-13 89.1 5.2 85 38-125 76-176 (258)
280 3v97_A Ribosomal RNA large sub 98.6 1E-07 3.5E-12 95.6 10.9 119 33-159 175-345 (703)
281 3ll7_A Putative methyltransfer 98.6 1.2E-08 4.2E-13 95.8 3.7 111 52-165 94-213 (410)
282 3s1s_A Restriction endonucleas 98.6 2.1E-07 7.3E-12 93.3 10.6 139 52-191 322-498 (878)
283 2qy6_A UPF0209 protein YFCK; s 98.5 1.3E-07 4.4E-12 83.6 7.4 117 52-183 61-229 (257)
284 4fzv_A Putative methyltransfer 98.5 1.2E-07 4.2E-12 87.6 7.4 134 37-173 137-300 (359)
285 3ua3_A Protein arginine N-meth 98.5 1.9E-07 6.3E-12 92.4 6.7 135 12-158 368-531 (745)
286 2k4m_A TR8_protein, UPF0146 pr 98.4 9.9E-08 3.4E-12 76.6 3.7 82 52-161 36-121 (153)
287 2px2_A Genome polyprotein [con 98.4 6.6E-07 2.3E-11 78.2 8.9 131 52-194 74-214 (269)
288 3cvo_A Methyltransferase-like 98.4 1.7E-06 6E-11 73.5 11.1 92 52-161 31-154 (202)
289 4gqb_A Protein arginine N-meth 98.4 5.4E-07 1.9E-11 88.8 7.8 133 14-158 315-464 (637)
290 4auk_A Ribosomal RNA large sub 98.4 8.4E-06 2.9E-10 75.2 15.2 117 52-183 212-334 (375)
291 2wk1_A NOVP; transferase, O-me 98.3 4.7E-06 1.6E-10 74.5 10.6 119 52-183 107-266 (282)
292 1wg8_A Predicted S-adenosylmet 98.2 2.8E-06 9.4E-11 75.6 8.4 81 35-119 9-95 (285)
293 3c6k_A Spermine synthase; sper 98.2 7.6E-06 2.6E-10 75.8 10.9 128 52-183 206-353 (381)
294 3lkz_A Non-structural protein 98.2 6.1E-05 2.1E-09 67.0 15.3 138 40-194 86-235 (321)
295 3p8z_A Mtase, non-structural p 98.1 6.5E-05 2.2E-09 64.9 13.9 138 40-195 70-218 (267)
296 2zig_A TTHA0409, putative modi 98.1 7.3E-06 2.5E-10 73.6 7.8 56 35-94 223-278 (297)
297 3ufb_A Type I restriction-modi 98.0 5.5E-05 1.9E-09 73.3 12.2 153 35-192 204-395 (530)
298 3r24_A NSP16, 2'-O-methyl tran 97.8 5.6E-05 1.9E-09 67.2 8.4 140 52-207 110-258 (344)
299 1g60_A Adenine-specific methyl 97.6 0.00015 5E-09 63.7 8.0 56 35-94 200-255 (260)
300 1g55_A DNA cytosine methyltran 97.5 0.00021 7E-09 65.5 8.4 131 52-183 2-143 (343)
301 2c7p_A Modification methylase 97.4 0.0025 8.5E-08 57.9 13.3 129 52-183 11-147 (327)
302 3g7u_A Cytosine-specific methy 97.4 0.002 6.9E-08 59.6 12.7 130 53-183 3-145 (376)
303 2oo3_A Protein involved in cat 97.3 0.00053 1.8E-08 60.9 7.1 125 52-188 92-224 (283)
304 2vz8_A Fatty acid synthase; tr 97.2 5.4E-05 1.9E-09 85.2 0.8 98 52-160 1241-1347(2512)
305 3ubt_Y Modification methylase 97.2 0.0045 1.5E-07 55.7 13.3 129 53-183 1-137 (331)
306 1i4w_A Mitochondrial replicati 97.2 0.00087 3E-08 61.6 8.5 70 35-104 39-115 (353)
307 3tka_A Ribosomal RNA small sub 97.2 0.00021 7.4E-09 64.9 4.3 82 35-120 44-135 (347)
308 3qv2_A 5-cytosine DNA methyltr 96.8 0.0073 2.5E-07 54.8 10.8 130 52-183 10-154 (327)
309 1boo_A Protein (N-4 cytosine-s 96.8 0.0033 1.1E-07 56.9 8.1 57 35-95 240-296 (323)
310 2uyo_A Hypothetical protein ML 96.7 0.025 8.5E-07 50.8 13.0 104 52-165 103-222 (310)
311 3vyw_A MNMC2; tRNA wobble urid 96.5 0.0029 1E-07 56.9 5.6 124 52-189 97-248 (308)
312 4h0n_A DNMT2; SAH binding, tra 96.5 0.0088 3E-07 54.4 8.7 130 52-183 3-143 (333)
313 1eg2_A Modification methylase 96.4 0.005 1.7E-07 55.7 6.8 58 34-95 229-289 (319)
314 2qrv_A DNA (cytosine-5)-methyl 96.4 0.011 3.8E-07 52.8 8.8 110 52-161 16-140 (295)
315 1rjd_A PPM1P, carboxy methyl t 96.0 0.18 6.1E-06 45.7 14.9 98 52-161 98-233 (334)
316 2hwk_A Helicase NSP2; rossman 96.0 0.027 9.4E-07 49.7 8.8 136 59-207 149-298 (320)
317 3s2e_A Zinc-containing alcohol 95.9 0.0056 1.9E-07 55.3 4.1 100 39-160 157-262 (340)
318 3pvc_A TRNA 5-methylaminomethy 95.8 0.01 3.6E-07 58.9 6.2 118 52-183 59-227 (689)
319 1pl8_A Human sorbitol dehydrog 95.8 0.043 1.5E-06 49.8 9.6 100 40-160 163-272 (356)
320 2dph_A Formaldehyde dismutase; 95.7 0.047 1.6E-06 50.4 9.8 111 40-160 177-298 (398)
321 1f8f_A Benzyl alcohol dehydrog 95.7 0.023 7.9E-07 51.9 7.6 98 42-160 184-288 (371)
322 3swr_A DNA (cytosine-5)-methyl 95.6 0.29 9.8E-06 50.7 16.1 132 52-183 540-696 (1002)
323 3two_A Mannitol dehydrogenase; 95.5 0.034 1.2E-06 50.3 7.7 96 39-160 167-264 (348)
324 3ps9_A TRNA 5-methylaminomethy 95.4 0.018 6E-07 57.1 6.2 118 52-183 67-235 (676)
325 3me5_A Cytosine-specific methy 95.4 0.091 3.1E-06 50.1 10.8 131 52-183 88-254 (482)
326 1e3j_A NADP(H)-dependent ketos 95.4 0.071 2.4E-06 48.2 9.7 101 39-160 159-270 (352)
327 4ej6_A Putative zinc-binding d 95.3 0.12 4E-06 47.3 10.9 100 40-160 174-283 (370)
328 3m6i_A L-arabinitol 4-dehydrog 95.3 0.1 3.6E-06 47.2 10.4 102 39-160 170-282 (363)
329 2zig_A TTHA0409, putative modi 95.2 0.012 3.9E-07 52.5 3.4 88 96-183 22-130 (297)
330 1kol_A Formaldehyde dehydrogen 94.9 0.12 4.1E-06 47.5 9.8 114 40-160 177-299 (398)
331 1boo_A Protein (N-4 cytosine-s 94.8 0.024 8.2E-07 51.1 4.7 88 96-183 15-114 (323)
332 3fpc_A NADP-dependent alcohol 94.8 0.083 2.8E-06 47.7 8.2 101 39-160 157-265 (352)
333 4ft4_B DNA (cytosine-5)-methyl 94.6 0.24 8.2E-06 49.8 11.9 52 52-103 212-270 (784)
334 3trk_A Nonstructural polyprote 94.6 0.043 1.5E-06 47.9 5.3 93 106-203 204-300 (324)
335 1pqw_A Polyketide synthase; ro 94.5 0.099 3.4E-06 42.9 7.4 93 44-160 34-136 (198)
336 3uko_A Alcohol dehydrogenase c 94.5 0.11 3.7E-06 47.5 8.4 98 42-160 187-294 (378)
337 3fwz_A Inner membrane protein 94.5 0.47 1.6E-05 36.7 11.0 109 52-182 7-120 (140)
338 1uuf_A YAHK, zinc-type alcohol 94.4 0.05 1.7E-06 49.8 5.8 99 40-160 186-287 (369)
339 3uog_A Alcohol dehydrogenase; 94.2 0.29 9.8E-06 44.4 10.3 95 43-160 184-286 (363)
340 1p0f_A NADP-dependent alcohol 94.1 0.17 5.7E-06 46.1 8.6 98 42-160 185-292 (373)
341 4b7c_A Probable oxidoreductase 94.1 0.16 5.3E-06 45.5 8.2 97 42-160 143-247 (336)
342 1rjw_A ADH-HT, alcohol dehydro 94.0 0.33 1.1E-05 43.5 10.3 97 40-160 156-260 (339)
343 1cdo_A Alcohol dehydrogenase; 93.9 0.15 5E-06 46.5 7.9 91 52-160 193-293 (374)
344 2fzw_A Alcohol dehydrogenase c 93.9 0.18 6.1E-06 45.8 8.5 98 42-160 184-291 (373)
345 2jhf_A Alcohol dehydrogenase E 93.9 0.2 6.9E-06 45.5 8.8 97 43-160 186-292 (374)
346 1v3u_A Leukotriene B4 12- hydr 93.9 0.13 4.6E-06 45.9 7.4 95 42-160 139-243 (333)
347 2j3h_A NADP-dependent oxidored 93.9 0.22 7.6E-06 44.6 8.9 96 42-160 149-254 (345)
348 3tos_A CALS11; methyltransfera 93.9 0.51 1.7E-05 41.1 10.8 118 52-182 70-240 (257)
349 1jvb_A NAD(H)-dependent alcoho 93.8 0.098 3.3E-06 47.2 6.3 98 40-160 162-270 (347)
350 3nx4_A Putative oxidoreductase 93.7 0.25 8.5E-06 43.8 8.9 89 54-160 149-240 (324)
351 4dvj_A Putative zinc-dependent 93.7 0.52 1.8E-05 42.7 11.1 89 52-160 172-269 (363)
352 3av4_A DNA (cytosine-5)-methyl 93.7 0.78 2.7E-05 48.8 13.6 130 52-183 851-1007(1330)
353 3goh_A Alcohol dehydrogenase, 93.6 0.051 1.7E-06 48.3 3.9 93 40-160 134-228 (315)
354 2hcy_A Alcohol dehydrogenase 1 93.4 0.11 3.9E-06 46.7 6.1 99 39-160 160-268 (347)
355 1e3i_A Alcohol dehydrogenase, 93.3 0.21 7.2E-06 45.4 7.9 91 52-160 196-296 (376)
356 4eez_A Alcohol dehydrogenase 1 93.3 1.4 4.7E-05 39.3 13.2 102 39-160 154-262 (348)
357 2h6e_A ADH-4, D-arabinose 1-de 93.3 0.078 2.7E-06 47.8 4.7 90 52-160 171-268 (344)
358 1vj0_A Alcohol dehydrogenase, 93.2 0.087 3E-06 48.3 4.9 100 40-160 186-297 (380)
359 3gms_A Putative NADPH:quinone 93.1 0.14 4.9E-06 45.9 6.3 97 41-160 137-242 (340)
360 1piw_A Hypothetical zinc-type 93.1 0.098 3.3E-06 47.5 5.2 102 39-160 170-275 (360)
361 2cf5_A Atccad5, CAD, cinnamyl 93.0 0.12 4E-06 46.9 5.6 101 40-160 171-274 (357)
362 1yqd_A Sinapyl alcohol dehydro 92.6 0.18 6E-06 45.9 6.1 102 39-160 177-281 (366)
363 3jv7_A ADH-A; dehydrogenase, n 92.4 0.42 1.4E-05 42.8 8.4 89 52-160 172-269 (345)
364 2py6_A Methyltransferase FKBM; 92.2 0.2 6.9E-06 46.6 6.1 41 52-92 227-271 (409)
365 2b5w_A Glucose dehydrogenase; 92.0 0.42 1.4E-05 43.1 7.9 86 53-160 174-272 (357)
366 3iht_A S-adenosyl-L-methionine 91.9 0.39 1.3E-05 38.7 6.4 138 32-201 25-171 (174)
367 2d8a_A PH0655, probable L-thre 91.6 0.91 3.1E-05 40.7 9.7 89 52-160 168-266 (348)
368 1zkd_A DUF185; NESG, RPR58, st 91.6 1.2 4.2E-05 41.0 10.6 43 52-94 81-132 (387)
369 3c85_A Putative glutathione-re 91.6 2.7 9.3E-05 33.6 11.7 94 52-161 39-139 (183)
370 3fbg_A Putative arginate lyase 91.2 0.95 3.3E-05 40.5 9.4 88 52-159 151-246 (346)
371 2dq4_A L-threonine 3-dehydroge 91.2 0.4 1.4E-05 43.0 6.7 93 43-160 160-261 (343)
372 4gua_A Non-structural polyprot 91.0 0.54 1.8E-05 45.2 7.6 92 106-203 215-310 (670)
373 3iei_A Leucine carboxyl methyl 90.9 8.7 0.0003 34.5 16.6 99 52-160 91-229 (334)
374 2zb4_A Prostaglandin reductase 90.8 0.88 3E-05 40.9 8.8 96 42-160 152-259 (357)
375 4a2c_A Galactitol-1-phosphate 90.8 1.4 4.6E-05 39.3 9.9 100 39-160 151-259 (346)
376 1xa0_A Putative NADPH dependen 90.8 0.3 1E-05 43.4 5.5 88 54-160 152-245 (328)
377 3jyn_A Quinone oxidoreductase; 90.7 0.43 1.5E-05 42.4 6.5 90 52-160 141-238 (325)
378 1yb5_A Quinone oxidoreductase; 90.5 0.67 2.3E-05 41.8 7.6 94 43-160 165-268 (351)
379 3qwb_A Probable quinone oxidor 90.4 0.56 1.9E-05 41.8 7.0 90 52-160 149-246 (334)
380 3ip1_A Alcohol dehydrogenase, 90.3 2.1 7.3E-05 39.2 11.0 95 52-160 214-317 (404)
381 2eih_A Alcohol dehydrogenase; 90.3 0.67 2.3E-05 41.5 7.4 88 52-160 167-264 (343)
382 2c0c_A Zinc binding alcohol de 90.3 1.4 4.9E-05 39.7 9.7 96 43-160 158-260 (362)
383 3dii_A Short-chain dehydrogena 90.2 1.1 3.7E-05 38.0 8.4 72 53-124 3-86 (247)
384 1tt7_A YHFP; alcohol dehydroge 90.1 0.5 1.7E-05 42.0 6.4 88 54-160 153-246 (330)
385 1qor_A Quinone oxidoreductase; 89.9 0.72 2.5E-05 40.9 7.2 88 52-160 141-238 (327)
386 1lss_A TRK system potassium up 89.7 2.6 9E-05 31.6 9.5 94 52-161 4-102 (140)
387 3tqh_A Quinone oxidoreductase; 89.6 1.1 3.8E-05 39.6 8.2 98 39-160 143-244 (321)
388 3mag_A VP39; methylated adenin 89.1 1.5 5.1E-05 38.8 8.3 55 29-83 35-98 (307)
389 4eso_A Putative oxidoreductase 88.9 0.94 3.2E-05 38.7 7.0 106 52-160 8-137 (255)
390 3l9w_A Glutathione-regulated p 88.8 3.9 0.00013 37.9 11.6 93 52-160 4-101 (413)
391 3gaz_A Alcohol dehydrogenase s 88.8 1.3 4.3E-05 39.7 8.0 93 42-160 144-245 (343)
392 3e8x_A Putative NAD-dependent 88.7 2.5 8.6E-05 35.1 9.4 70 52-124 21-95 (236)
393 1g60_A Adenine-specific methyl 88.7 0.75 2.6E-05 39.7 6.2 41 140-183 53-93 (260)
394 1iz0_A Quinone oxidoreductase; 88.6 0.23 8E-06 43.6 2.9 85 52-160 126-217 (302)
395 3pxx_A Carveol dehydrogenase; 88.5 2.2 7.6E-05 36.6 9.2 108 52-160 10-152 (287)
396 3ggo_A Prephenate dehydrogenas 88.5 4 0.00014 36.2 11.1 105 53-176 34-142 (314)
397 4eye_A Probable oxidoreductase 88.3 0.64 2.2E-05 41.7 5.7 96 42-160 153-256 (342)
398 2j8z_A Quinone oxidoreductase; 88.3 0.98 3.3E-05 40.6 6.9 88 52-160 163-260 (354)
399 3g0o_A 3-hydroxyisobutyrate de 88.2 5.4 0.00018 34.8 11.7 117 52-191 7-128 (303)
400 4a0s_A Octenoyl-COA reductase/ 88.1 3 0.0001 38.6 10.4 90 52-159 221-334 (447)
401 3llv_A Exopolyphosphatase-rela 87.8 0.9 3.1E-05 34.8 5.6 67 52-120 6-77 (141)
402 3o38_A Short chain dehydrogena 87.7 2.1 7.2E-05 36.4 8.5 73 52-124 22-112 (266)
403 1wly_A CAAR, 2-haloacrylate re 87.7 0.69 2.3E-05 41.2 5.5 88 52-160 146-243 (333)
404 2a4k_A 3-oxoacyl-[acyl carrier 87.4 3.8 0.00013 35.0 9.9 73 52-124 6-91 (263)
405 3ioy_A Short-chain dehydrogena 86.9 1.9 6.5E-05 38.2 7.9 73 52-124 8-98 (319)
406 1cyd_A Carbonyl reductase; sho 86.7 7.5 0.00026 32.2 11.3 73 52-124 7-87 (244)
407 2g5c_A Prephenate dehydrogenas 86.5 12 0.0004 32.0 12.7 103 54-176 3-110 (281)
408 1eg2_A Modification methylase 86.5 0.74 2.5E-05 41.2 4.9 95 97-191 40-144 (319)
409 3krt_A Crotonyl COA reductase; 85.7 2.5 8.6E-05 39.4 8.4 88 52-159 229-342 (456)
410 4dup_A Quinone oxidoreductase; 85.6 0.55 1.9E-05 42.3 3.7 90 52-160 168-264 (353)
411 3gvc_A Oxidoreductase, probabl 85.6 3.4 0.00012 35.7 8.7 74 52-125 29-115 (277)
412 3ius_A Uncharacterized conserv 85.3 7.2 0.00025 33.1 10.7 64 53-123 6-73 (286)
413 3h2s_A Putative NADH-flavin re 85.3 4.8 0.00016 32.8 9.2 97 54-160 2-103 (224)
414 2f1k_A Prephenate dehydrogenas 84.8 6.7 0.00023 33.5 10.2 99 54-173 2-102 (279)
415 4dkj_A Cytosine-specific methy 84.7 9.6 0.00033 35.1 11.7 131 52-183 10-212 (403)
416 2h78_A Hibadh, 3-hydroxyisobut 84.5 4.8 0.00017 35.0 9.3 109 52-181 3-116 (302)
417 3tjr_A Short chain dehydrogena 84.5 2.5 8.5E-05 37.0 7.4 73 52-124 31-119 (301)
418 2cdc_A Glucose dehydrogenase g 84.3 2.3 7.7E-05 38.3 7.2 87 52-160 181-277 (366)
419 2ew2_A 2-dehydropantoate 2-red 84.3 5.7 0.00019 34.3 9.7 93 53-159 4-106 (316)
420 4e21_A 6-phosphogluconate dehy 84.3 3.2 0.00011 37.6 8.2 111 52-181 22-134 (358)
421 3oig_A Enoyl-[acyl-carrier-pro 84.2 3 0.0001 35.4 7.7 109 52-160 7-146 (266)
422 3f9i_A 3-oxoacyl-[acyl-carrier 84.2 5.7 0.0002 33.2 9.4 73 52-124 14-95 (249)
423 4dll_A 2-hydroxy-3-oxopropiona 84.2 6.9 0.00024 34.5 10.2 117 52-192 31-151 (320)
424 1vpd_A Tartronate semialdehyde 84.1 4.2 0.00014 35.2 8.7 107 53-180 6-117 (299)
425 2gdz_A NAD+-dependent 15-hydro 84.0 2.1 7.1E-05 36.5 6.5 72 52-123 7-96 (267)
426 3lf2_A Short chain oxidoreduct 83.8 3.8 0.00013 34.9 8.2 73 52-124 8-98 (265)
427 3guy_A Short-chain dehydrogena 83.7 11 0.00037 31.1 10.8 71 54-124 3-83 (230)
428 4fgs_A Probable dehydrogenase 82.8 2.8 9.6E-05 36.6 6.9 106 52-160 29-158 (273)
429 3is3_A 17BETA-hydroxysteroid d 82.8 5.6 0.00019 33.9 8.8 106 52-160 18-151 (270)
430 4e6p_A Probable sorbitol dehyd 82.8 5.3 0.00018 33.8 8.6 73 52-124 8-93 (259)
431 4f3n_A Uncharacterized ACR, CO 82.6 3.2 0.00011 38.8 7.5 69 21-92 109-185 (432)
432 3grk_A Enoyl-(acyl-carrier-pro 82.6 3.7 0.00013 35.7 7.6 107 52-160 31-168 (293)
433 2ae2_A Protein (tropinone redu 82.4 6.7 0.00023 33.1 9.1 73 52-124 9-98 (260)
434 1w6u_A 2,4-dienoyl-COA reducta 82.3 8.3 0.00029 33.1 9.9 73 52-124 26-115 (302)
435 3c24_A Putative oxidoreductase 81.8 7.7 0.00026 33.4 9.4 84 53-158 12-98 (286)
436 1g0o_A Trihydroxynaphthalene r 81.5 5.4 0.00019 34.2 8.3 106 52-160 29-162 (283)
437 1wma_A Carbonyl reductase [NAD 81.4 3.2 0.00011 35.0 6.6 71 52-123 4-92 (276)
438 3k31_A Enoyl-(acyl-carrier-pro 81.3 5 0.00017 34.9 8.0 73 52-124 30-119 (296)
439 3l4b_C TRKA K+ channel protien 81.2 6.5 0.00022 32.3 8.4 90 54-160 2-98 (218)
440 3cky_A 2-hydroxymethyl glutara 81.0 8.7 0.0003 33.1 9.5 107 52-180 4-116 (301)
441 2cvz_A Dehydrogenase, 3-hydrox 80.7 8.6 0.00029 32.8 9.3 104 54-180 3-108 (289)
442 3gg2_A Sugar dehydrogenase, UD 80.7 7.3 0.00025 36.4 9.4 40 53-92 3-44 (450)
443 2y0c_A BCEC, UDP-glucose dehyd 80.7 7.1 0.00024 36.8 9.3 41 52-92 8-50 (478)
444 3oec_A Carveol dehydrogenase ( 80.4 7.7 0.00026 34.0 9.1 73 52-124 46-146 (317)
445 4ezb_A Uncharacterized conserv 80.3 15 0.00052 32.3 10.9 105 53-181 25-140 (317)
446 4gbj_A 6-phosphogluconate dehy 80.3 7.3 0.00025 34.1 8.8 117 54-193 7-125 (297)
447 4hp8_A 2-deoxy-D-gluconate 3-d 80.2 9.8 0.00033 32.6 9.3 74 52-125 9-91 (247)
448 4dqx_A Probable oxidoreductase 80.1 8.2 0.00028 33.1 9.0 73 52-124 27-112 (277)
449 3hn7_A UDP-N-acetylmuramate-L- 80.0 14 0.00048 35.1 11.3 117 52-183 19-151 (524)
450 3ew7_A LMO0794 protein; Q8Y8U8 80.0 7.8 0.00027 31.3 8.4 66 54-123 2-71 (221)
451 1sby_A Alcohol dehydrogenase; 79.9 9.5 0.00033 31.9 9.2 71 52-123 5-94 (254)
452 3ged_A Short-chain dehydrogena 79.9 6 0.0002 33.9 7.9 72 53-124 3-86 (247)
453 3qha_A Putative oxidoreductase 79.9 3.4 0.00012 36.1 6.4 114 53-191 16-131 (296)
454 3v2g_A 3-oxoacyl-[acyl-carrier 79.5 9 0.00031 32.7 9.0 106 52-160 31-164 (271)
455 4e12_A Diketoreductase; oxidor 79.3 6.2 0.00021 34.1 7.9 93 53-161 5-121 (283)
456 1zcj_A Peroxisomal bifunctiona 79.1 6.8 0.00023 36.7 8.6 91 53-160 38-149 (463)
457 1mxh_A Pteridine reductase 2; 79.1 25 0.00087 29.6 11.8 73 52-124 11-105 (276)
458 1ja9_A 4HNR, 1,3,6,8-tetrahydr 78.9 4.9 0.00017 34.0 7.0 72 52-124 21-110 (274)
459 3ijr_A Oxidoreductase, short c 78.5 9.4 0.00032 33.0 8.9 107 52-160 47-181 (291)
460 4egf_A L-xylulose reductase; s 78.2 9.1 0.00031 32.5 8.6 73 52-124 20-109 (266)
461 2g1u_A Hypothetical protein TM 78.1 7.9 0.00027 30.0 7.5 95 52-161 19-118 (155)
462 3pef_A 6-phosphogluconate dehy 78.1 5.1 0.00017 34.6 7.0 115 53-191 2-121 (287)
463 2wsb_A Galactitol dehydrogenas 77.9 8.3 0.00029 32.1 8.2 73 52-124 11-96 (254)
464 2pd4_A Enoyl-[acyl-carrier-pro 77.5 5.4 0.00019 34.1 7.0 73 52-124 6-95 (275)
465 3gqv_A Enoyl reductase; medium 77.1 7.3 0.00025 35.0 8.0 89 52-159 165-261 (371)
466 3o26_A Salutaridine reductase; 77.0 9.3 0.00032 32.7 8.4 73 52-124 12-102 (311)
467 3k96_A Glycerol-3-phosphate de 77.0 4.8 0.00017 36.4 6.7 91 52-160 29-132 (356)
468 3b1f_A Putative prephenate deh 76.9 20 0.00067 30.7 10.5 87 53-158 7-98 (290)
469 1ej6_A Lambda2; icosahedral, n 76.8 1.1 3.8E-05 46.2 2.4 101 52-159 822-924 (1289)
470 1id1_A Putative potassium chan 76.7 11 0.00038 28.9 8.0 93 53-161 4-105 (153)
471 3ojo_A CAP5O; rossmann fold, c 76.7 34 0.0012 31.7 12.6 41 52-92 11-53 (431)
472 2vn8_A Reticulon-4-interacting 76.7 1.2 4E-05 40.4 2.5 90 52-160 184-279 (375)
473 3ksu_A 3-oxoacyl-acyl carrier 76.6 6.6 0.00023 33.3 7.2 106 52-160 11-146 (262)
474 4fs3_A Enoyl-[acyl-carrier-pro 76.1 8.1 0.00028 32.8 7.6 72 52-123 6-96 (256)
475 3t4x_A Oxidoreductase, short c 76.0 12 0.00039 31.8 8.6 73 52-124 10-96 (267)
476 3hwr_A 2-dehydropantoate 2-red 75.8 15 0.00052 32.2 9.6 91 52-162 19-121 (318)
477 3eag_A UDP-N-acetylmuramate:L- 75.7 22 0.00075 31.3 10.6 120 52-183 4-137 (326)
478 1bg6_A N-(1-D-carboxylethyl)-L 75.6 6.4 0.00022 34.8 7.1 106 53-180 5-126 (359)
479 3d1l_A Putative NADP oxidoredu 75.5 18 0.00061 30.5 9.7 88 52-159 10-100 (266)
480 3r3s_A Oxidoreductase; structu 75.4 8.5 0.00029 33.3 7.7 107 52-160 49-184 (294)
481 3ce6_A Adenosylhomocysteinase; 75.1 5.8 0.0002 37.7 6.9 86 52-161 274-361 (494)
482 1y1p_A ARII, aldehyde reductas 75.1 29 0.001 29.8 11.2 72 52-124 11-94 (342)
483 2eez_A Alanine dehydrogenase; 74.9 1.6 5.6E-05 39.6 3.0 94 52-160 166-265 (369)
484 4imr_A 3-oxoacyl-(acyl-carrier 74.6 7.5 0.00026 33.4 7.0 73 52-124 33-120 (275)
485 3e9n_A Putative short-chain de 74.5 10 0.00035 31.5 7.8 71 52-124 5-86 (245)
486 3tsc_A Putative oxidoreductase 74.4 13 0.00043 31.7 8.5 73 52-124 11-112 (277)
487 2p91_A Enoyl-[acyl-carrier-pro 74.3 10 0.00034 32.5 7.8 73 52-124 21-110 (285)
488 2ag5_A DHRS6, dehydrogenase/re 74.2 4 0.00014 34.3 5.1 72 52-124 6-85 (246)
489 4gwg_A 6-phosphogluconate dehy 74.1 13 0.00044 35.2 9.0 114 53-181 5-122 (484)
490 1yde_A Retinal dehydrogenase/r 73.9 11 0.00037 32.2 7.9 72 52-123 9-92 (270)
491 3e03_A Short chain dehydrogena 73.8 18 0.0006 30.8 9.3 73 52-124 6-101 (274)
492 2nwq_A Probable short-chain de 73.7 13 0.00043 31.9 8.3 70 54-123 23-107 (272)
493 1ae1_A Tropinone reductase-I; 73.7 6 0.0002 33.8 6.2 73 52-124 21-110 (273)
494 2aef_A Calcium-gated potassium 73.3 11 0.00037 31.3 7.6 90 52-161 9-105 (234)
495 2hmt_A YUAA protein; RCK, KTN, 72.3 13 0.00043 27.7 7.2 65 52-120 6-77 (144)
496 2zyd_A 6-phosphogluconate dehy 72.3 18 0.00061 34.0 9.6 115 52-181 15-132 (480)
497 4g81_D Putative hexonate dehyd 71.9 9.6 0.00033 32.7 7.0 74 52-125 9-98 (255)
498 3asu_A Short-chain dehydrogena 71.8 20 0.00069 30.0 9.0 70 54-123 2-84 (248)
499 2vhw_A Alanine dehydrogenase; 71.7 1.8 6.3E-05 39.5 2.5 94 52-159 168-266 (377)
500 4a7p_A UDP-glucose dehydrogena 71.6 12 0.0004 35.0 8.0 119 52-180 8-147 (446)
No 1
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.82 E-value=3.3e-19 Score=157.61 Aligned_cols=140 Identities=23% Similarity=0.290 Sum_probs=107.0
Q ss_pred CCCCCCcccCCchhhccccccch-----hHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEe
Q 043626 6 ELIAPPEIFYDDTEARKYTSSSR-----IIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLD 80 (291)
Q Consensus 6 e~~~ppe~fy~~~~a~~Y~~~~~-----~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvD 80 (291)
...+.+..+|++..+..|+.... +......+.+.+...+ ++ +.+|||||||+|.++..|++.+..++|+|
T Consensus 5 ~~~~~~~~~y~~~~a~~yd~~~~~~~~~~~~~~~~~~~~l~~~~--~~---~~~vLDiGcG~G~~~~~l~~~~~~v~gvD 79 (263)
T 3pfg_A 5 SATAGPQADYSGEIAELYDLVHQGKGKDYHREAADLAALVRRHS--PK---AASLLDVACGTGMHLRHLADSFGTVEGLE 79 (263)
T ss_dssp -----CBCSCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHC--TT---CCEEEEETCTTSHHHHHHTTTSSEEEEEE
T ss_pred ccCcCcccccchhHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhC--CC---CCcEEEeCCcCCHHHHHHHHcCCeEEEEE
Confidence 34455667888677888876432 2222233333333332 22 57999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECC-chhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEE
Q 043626 81 ISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISIS-AVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVF 159 (291)
Q Consensus 81 is~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~-~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~ 159 (291)
+|+.|++.|+++...+.++++|+.. +++ +++||+|++.. +++|+.+ ...+..+|.+++++|+|||.+++
T Consensus 80 ~s~~~~~~a~~~~~~~~~~~~d~~~-~~~-~~~fD~v~~~~~~l~~~~~--------~~~~~~~l~~~~~~L~pgG~l~i 149 (263)
T 3pfg_A 80 LSADMLAIARRRNPDAVLHHGDMRD-FSL-GRRFSAVTCMFSSIGHLAG--------QAELDAALERFAAHVLPDGVVVV 149 (263)
T ss_dssp SCHHHHHHHHHHCTTSEEEECCTTT-CCC-SCCEEEEEECTTGGGGSCH--------HHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CCHHHHHHHHhhCCCCEEEECChHH-CCc-cCCcCEEEEcCchhhhcCC--------HHHHHHHHHHHHHhcCCCcEEEE
Confidence 9999999999998889999999944 566 78999999998 9999853 12367899999999999999999
Q ss_pred E
Q 043626 160 Q 160 (291)
Q Consensus 160 ~ 160 (291)
.
T Consensus 150 ~ 150 (263)
T 3pfg_A 150 E 150 (263)
T ss_dssp C
T ss_pred E
Confidence 5
No 2
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.82 E-value=1.4e-19 Score=160.30 Aligned_cols=153 Identities=21% Similarity=0.291 Sum_probs=116.1
Q ss_pred cCCchhhccccccchhHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC
Q 043626 14 FYDDTEARKYTSSSRIIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE 93 (291)
Q Consensus 14 fy~~~~a~~Y~~~~~~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~ 93 (291)
+|+ ..+..|+...... ..+.+.+++.+...+ +.+|||||||+|.++..+++.+..|+|+|+|+.|++.|+.+.
T Consensus 4 ~y~-~~a~~y~~~~~~~---~~~~~~l~~~~~~~~---~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~ 76 (261)
T 3ege_A 4 IYN-SIGKQYSQTRVPD---IRIVNAIINLLNLPK---GSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHP 76 (261)
T ss_dssp ----------CCSBCCC---HHHHHHHHHHHCCCT---TCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCT
T ss_pred HHH-HHHHHHhhccccc---HHHHHHHHHHhCCCC---CCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhcc
Confidence 454 5677787765432 256777888887665 789999999999999999999999999999999999888776
Q ss_pred CcceEEEccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC--------
Q 043626 94 VEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES-------- 165 (291)
Q Consensus 94 ~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~-------- 165 (291)
++.++++|+ ..+++++++||+|++..+++|+.+ ...++++++++|+ ||++++..+...
T Consensus 77 -~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~-----------~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~ 142 (261)
T 3ege_A 77 -QVEWFTGYA-ENLALPDKSVDGVISILAIHHFSH-----------LEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLY 142 (261)
T ss_dssp -TEEEECCCT-TSCCSCTTCBSEEEEESCGGGCSS-----------HHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGG
T ss_pred -CCEEEECch-hhCCCCCCCEeEEEEcchHhhccC-----------HHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHH
Confidence 789999998 557888899999999999999977 7799999999999 997777543310
Q ss_pred -------------hHHHHHHHHHHHHcCCCCcEEEe
Q 043626 166 -------------VAQRELILGAAMRAGFAGGVVVD 188 (291)
Q Consensus 166 -------------~~~~~~i~~~~~~aGF~~~~~~~ 188 (291)
......+. ++.++||....+..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~ 177 (261)
T 3ege_A 143 DYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAIP 177 (261)
T ss_dssp GTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEE
T ss_pred HHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEEE
Confidence 11345566 89999998633333
No 3
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.82 E-value=2.5e-19 Score=152.92 Aligned_cols=153 Identities=20% Similarity=0.282 Sum_probs=121.1
Q ss_pred CCchhhccccccch--hHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc-CCeEEEEeCCHHHHHHHHh
Q 043626 15 YDDTEARKYTSSSR--IIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN-GHQWIGLDISQSMLNIALE 91 (291)
Q Consensus 15 y~~~~a~~Y~~~~~--~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~-g~~v~gvDis~~ml~~a~~ 91 (291)
|++..+..|+.... ...+...+.+.+++.+..++ . +|||||||+|.++..+++. +..++|+|+|+.|++.|++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~ 84 (219)
T 3dlc_A 9 FDKKGAKNMDEISKTLFAPIYPIIAENIINRFGITA---G-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALK 84 (219)
T ss_dssp TSHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHCCCE---E-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHH
T ss_pred hhhcchhhHHHHHHHhhccccHHHHHHHHHhcCCCC---C-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHH
Confidence 34344555544321 22345567788888887664 4 9999999999999999987 6799999999999999998
Q ss_pred cC------CcceEEEccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC-
Q 043626 92 RE------VEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE- 164 (291)
Q Consensus 92 ~~------~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~- 164 (291)
+. ..+.++++|+ ..+++++++||+|+++.+++|+.+ ...++.+++++|+|||.+++.....
T Consensus 85 ~~~~~~~~~~~~~~~~d~-~~~~~~~~~~D~v~~~~~l~~~~~-----------~~~~l~~~~~~L~pgG~l~~~~~~~~ 152 (219)
T 3dlc_A 85 NIADANLNDRIQIVQGDV-HNIPIEDNYADLIVSRGSVFFWED-----------VATAFREIYRILKSGGKTYIGGGFGN 152 (219)
T ss_dssp HHHHTTCTTTEEEEECBT-TBCSSCTTCEEEEEEESCGGGCSC-----------HHHHHHHHHHHEEEEEEEEEEECCSS
T ss_pred HHHhccccCceEEEEcCH-HHCCCCcccccEEEECchHhhccC-----------HHHHHHHHHHhCCCCCEEEEEeccCc
Confidence 73 3478999998 557788899999999999999966 6789999999999999999974221
Q ss_pred --------------------------ChHHHHHHHHHHHHcCCCC
Q 043626 165 --------------------------SVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 165 --------------------------~~~~~~~i~~~~~~aGF~~ 183 (291)
.....+.+..++.++||..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 197 (219)
T 3dlc_A 153 KELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISS 197 (219)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCe
Confidence 2234577889999999987
No 4
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.81 E-value=9.4e-20 Score=160.89 Aligned_cols=136 Identities=18% Similarity=0.247 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCC
Q 043626 33 QAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGL 107 (291)
Q Consensus 33 q~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~ 107 (291)
+....+.+++.+...+ +.+|||||||+|.++..|++.+..++|+|+|+.|++.|+++. .++.++.+|+ ..+
T Consensus 22 ~~~~~~~l~~~l~~~~---~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~-~~l 97 (260)
T 1vl5_A 22 KGSDLAKLMQIAALKG---NEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA-EQM 97 (260)
T ss_dssp -CCCHHHHHHHHTCCS---CCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CC
T ss_pred CHHHHHHHHHHhCCCC---CCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH-HhC
Confidence 3344567777887765 779999999999999999999889999999999999998764 4578999998 457
Q ss_pred CCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE--cCCCh-------------------
Q 043626 108 GLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI--YPESV------------------- 166 (291)
Q Consensus 108 ~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~--~~~~~------------------- 166 (291)
++++++||+|+++.+++|+.+ ...+|.+++++|+|||++++.. .+..+
T Consensus 98 ~~~~~~fD~V~~~~~l~~~~d-----------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (260)
T 1vl5_A 98 PFTDERFHIVTCRIAAHHFPN-----------PASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHR 166 (260)
T ss_dssp CSCTTCEEEEEEESCGGGCSC-----------HHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCC
T ss_pred CCCCCCEEEEEEhhhhHhcCC-----------HHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccC
Confidence 888899999999999999977 6789999999999999999863 22221
Q ss_pred -HHHHHHHHHHHHcCCCC
Q 043626 167 -AQRELILGAAMRAGFAG 183 (291)
Q Consensus 167 -~~~~~i~~~~~~aGF~~ 183 (291)
.....+..++.++||..
T Consensus 167 ~~~~~~~~~~l~~aGf~~ 184 (260)
T 1vl5_A 167 AWKKSDWLKMLEEAGFEL 184 (260)
T ss_dssp CCBHHHHHHHHHHHTCEE
T ss_pred CCCHHHHHHHHHHCCCeE
Confidence 12356778888999975
No 5
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.81 E-value=1.7e-20 Score=159.38 Aligned_cols=130 Identities=18% Similarity=0.233 Sum_probs=110.4
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccccc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADK 131 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~ 131 (291)
+.+|||||||+|.++..|++.+..++|+|+|+.|++.|+++...+.++.+|+ ..+++.+++||+|+++.+++|+...+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~~~- 119 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTHPSVTFHHGTI-TDLSDSPKRWAGLLAWYSLIHMGPGE- 119 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHCTTSEEECCCG-GGGGGSCCCEEEEEEESSSTTCCTTT-
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCCCeEEeCcc-cccccCCCCeEEEEehhhHhcCCHHH-
Confidence 4589999999999999999999999999999999999999988899999998 44677789999999999999986321
Q ss_pred cCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC-------------hHHHHHHHHHHHHcCCCCcEEEeCCC
Q 043626 132 ASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES-------------VAQRELILGAAMRAGFAGGVVVDYPH 191 (291)
Q Consensus 132 ~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~-------------~~~~~~i~~~~~~aGF~~~~~~~~p~ 191 (291)
+..++..++++|+|||.+++.+.... ....+.+..++.++||....+..++.
T Consensus 120 --------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 120 --------LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR 184 (203)
T ss_dssp --------HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT
T ss_pred --------HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC
Confidence 67999999999999999999764322 13467889999999998745555544
No 6
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.81 E-value=8.7e-20 Score=158.80 Aligned_cols=163 Identities=19% Similarity=0.280 Sum_probs=109.6
Q ss_pred CCCCCCCCCcccCCchhhccccccchhHH---HHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEE
Q 043626 3 NRPELIAPPEIFYDDTEARKYTSSSRIID---IQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGL 79 (291)
Q Consensus 3 ~~pe~~~ppe~fy~~~~a~~Y~~~~~~~~---iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gv 79 (291)
..++.......+|+ ..+..|+....... ....+...+.+.+ ++ +.+|||||||+|.++..+++.+..++|+
T Consensus 8 ~~~~~~~~~~~~~~-~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~---~~~vLDiG~G~G~~~~~l~~~~~~v~~v 81 (242)
T 3l8d_A 8 TKFNWHESAEKKWD-SSAEFWNQNSQEMWDSGSRSTIIPFFEQYV--KK---EAEVLDVGCGDGYGTYKLSRTGYKAVGV 81 (242)
T ss_dssp -------------------------CHHHHTSTTTTHHHHHHHHS--CT---TCEEEEETCTTSHHHHHHHHTTCEEEEE
T ss_pred cccchHHHHHHHHH-hHHHHhhhhhhhccCcccHHHHHHHHHHHc--CC---CCeEEEEcCCCCHHHHHHHHcCCeEEEE
Confidence 34444444555665 56666765432111 1123344444443 23 6799999999999999999999999999
Q ss_pred eCCHHHHHHHHhcC--CcceEEEccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEE
Q 043626 80 DISQSMLNIALERE--VEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARA 157 (291)
Q Consensus 80 Dis~~ml~~a~~~~--~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~l 157 (291)
|+|+.|++.++++. ..+.++.+|+ ..+++++++||+|++..+++|+.+ ...++..++++|+|||.+
T Consensus 82 D~s~~~~~~a~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~-----------~~~~l~~~~~~L~pgG~l 149 (242)
T 3l8d_A 82 DISEVMIQKGKERGEGPDLSFIKGDL-SSLPFENEQFEAIMAINSLEWTEE-----------PLRALNEIKRVLKSDGYA 149 (242)
T ss_dssp ESCHHHHHHHHTTTCBTTEEEEECBT-TBCSSCTTCEEEEEEESCTTSSSC-----------HHHHHHHHHHHEEEEEEE
T ss_pred ECCHHHHHHHHhhcccCCceEEEcch-hcCCCCCCCccEEEEcChHhhccC-----------HHHHHHHHHHHhCCCeEE
Confidence 99999999999874 4578999998 457888899999999999999976 678999999999999999
Q ss_pred EEEEcCCC-------------------hHHHHHHHHHHHHcCCCC
Q 043626 158 VFQIYPES-------------------VAQRELILGAAMRAGFAG 183 (291)
Q Consensus 158 v~~~~~~~-------------------~~~~~~i~~~~~~aGF~~ 183 (291)
++.+.... ......+..++.++||..
T Consensus 150 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 194 (242)
T 3l8d_A 150 CIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKV 194 (242)
T ss_dssp EEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEE
T ss_pred EEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEE
Confidence 99763221 123457888999999986
No 7
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.81 E-value=3.8e-19 Score=156.19 Aligned_cols=108 Identities=19% Similarity=0.361 Sum_probs=94.2
Q ss_pred HHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCC-eEEEEeCCHHHHHHHHhcCC--cceEEEccCCCCCCCCCCccc
Q 043626 39 RALELLALPDDGVPRLLLDIGCGSGLSGETLSENGH-QWIGLDISQSMLNIALEREV--EGDLLLGDMGQGLGLRPGVVD 115 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~-~v~gvDis~~ml~~a~~~~~--~~~~~~~D~~~~~~~~~~~fD 115 (291)
.+++++...+ +.+|||||||+|.++..+++.+. .|+|+|+|+.|++.|+++.. .+.++.+|+ ..+++..++||
T Consensus 35 ~l~~~~~~~~---~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~~~~~~~~fD 110 (253)
T 3g5l_A 35 ELKKMLPDFN---QKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAI-EDIAIEPDAYN 110 (253)
T ss_dssp HHHTTCCCCT---TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCG-GGCCCCTTCEE
T ss_pred HHHHhhhccC---CCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhccCCeEEEEcch-hhCCCCCCCeE
Confidence 4455554433 77999999999999999999986 99999999999999998864 578999998 55788889999
Q ss_pred EEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 116 GAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 116 ~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
+|++..+++|+.+ +..++++++++|+|||.+++.+
T Consensus 111 ~v~~~~~l~~~~~-----------~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 111 VVLSSLALHYIAS-----------FDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp EEEEESCGGGCSC-----------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEchhhhhhhh-----------HHHHHHHHHHHcCCCcEEEEEe
Confidence 9999999999976 7799999999999999999974
No 8
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.80 E-value=2e-19 Score=153.79 Aligned_cols=141 Identities=17% Similarity=0.171 Sum_probs=111.9
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccccc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADK 131 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~ 131 (291)
+.+|||||||+|.++..+++.+..++|+|+|+.|++.|+++. .+.++.+|+ ..++ ..++||+|+++.+++|+..
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~~~~--- 117 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL-GRPVRTMLF-HQLD-AIDAYDAVWAHACLLHVPR--- 117 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-TSCCEECCG-GGCC-CCSCEEEEEECSCGGGSCH---
T ss_pred CCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc-CCceEEeee-ccCC-CCCcEEEEEecCchhhcCH---
Confidence 679999999999999999999999999999999999999886 567888888 4455 6789999999999999852
Q ss_pred cCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCCh------------HHHHHHHHHHHHcC-CCCcEEEeCCC--CCCCC
Q 043626 132 ASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESV------------AQRELILGAAMRAG-FAGGVVVDYPH--SSKSR 196 (291)
Q Consensus 132 ~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~------------~~~~~i~~~~~~aG-F~~~~~~~~p~--~~~~~ 196 (291)
..+..++..++++|+|||++++.+..... ...+.+..++.++| |....+...+. .....
T Consensus 118 ------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~~~~~~~~ 191 (211)
T 3e23_A 118 ------DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEGKGFDQEL 191 (211)
T ss_dssp ------HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEEECTTSCE
T ss_pred ------HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccCCCCCCCC
Confidence 22779999999999999999998654321 25678899999999 99733333322 22234
Q ss_pred cEEEEEee
Q 043626 197 KEFLVLTC 204 (291)
Q Consensus 197 ~~~l~l~~ 204 (291)
..|+++..
T Consensus 192 ~~wl~~~~ 199 (211)
T 3e23_A 192 AQFLHVSV 199 (211)
T ss_dssp EEEEEEEE
T ss_pred ceEEEEEE
Confidence 56666654
No 9
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.80 E-value=1.5e-19 Score=157.81 Aligned_cols=135 Identities=22% Similarity=0.251 Sum_probs=108.6
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCC-CCCCCc
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGL-GLRPGV 113 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~-~~~~~~ 113 (291)
.+.++++..+....+ +.+|||||||+|.++..+++.+..++|+|+|+.|++.|+++ +.++.+|+...+ ++.+++
T Consensus 27 ~~~~~~~~~l~~~~~--~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~---~~~~~~d~~~~~~~~~~~~ 101 (240)
T 3dli_A 27 LVKARLRRYIPYFKG--CRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK---FNVVKSDAIEYLKSLPDKY 101 (240)
T ss_dssp HHHHHHGGGGGGTTT--CSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT---SEEECSCHHHHHHTSCTTC
T ss_pred HHHHHHHHHHhhhcC--CCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh---cceeeccHHHHhhhcCCCC
Confidence 344555555553332 67999999999999999999999999999999999999988 778888875433 777899
Q ss_pred ccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC----------------hHHHHHHHHHHH
Q 043626 114 VDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES----------------VAQRELILGAAM 177 (291)
Q Consensus 114 fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~----------------~~~~~~i~~~~~ 177 (291)
||+|+|+.+++|+.+++ +..+|.+++++|+|||++++.+.... ....+.+..++.
T Consensus 102 fD~i~~~~~l~~~~~~~---------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 172 (240)
T 3dli_A 102 LDGVMISHFVEHLDPER---------LFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILE 172 (240)
T ss_dssp BSEEEEESCGGGSCGGG---------HHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHH
T ss_pred eeEEEECCchhhCCcHH---------HHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHH
Confidence 99999999999997422 67999999999999999999764321 123467888899
Q ss_pred HcCCCC
Q 043626 178 RAGFAG 183 (291)
Q Consensus 178 ~aGF~~ 183 (291)
++||..
T Consensus 173 ~aGf~~ 178 (240)
T 3dli_A 173 YLGFRD 178 (240)
T ss_dssp HHTCEE
T ss_pred HCCCeE
Confidence 999985
No 10
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.80 E-value=3.2e-19 Score=154.80 Aligned_cols=136 Identities=20% Similarity=0.267 Sum_probs=107.8
Q ss_pred cccCCchhhccccccch-hHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHH
Q 043626 12 EIFYDDTEARKYTSSSR-IIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNI 88 (291)
Q Consensus 12 e~fy~~~~a~~Y~~~~~-~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~ 88 (291)
..+|+ ..+..|+.... .......+.+.+++++....+ +.+|||||||+|.++..+++. +..++|+|+|+.|++.
T Consensus 7 ~~~f~-~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~ 83 (234)
T 3dtn_A 7 KRKFD-AVSGKYDEQRRKFIPCFDDFYGVSVSIASVDTE--NPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEI 83 (234)
T ss_dssp CCCCC-HHHHHHHHHHHHHCTTHHHHHHHHHHTCCCSCS--SCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHH
T ss_pred HHHHH-HHHHHHHHhHHHhCcCHHHHHHHHHHHhhcCCC--CCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHH
Confidence 34566 67888877533 112234455777777764433 789999999999999999998 6899999999999999
Q ss_pred HHhcCC---cceEEEccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 89 ALEREV---EGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 89 a~~~~~---~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
|+++.. .+.++++|+ ..+++. ++||+|++..+++|+.+. ....++++++++|+|||.+++..
T Consensus 84 a~~~~~~~~~~~~~~~d~-~~~~~~-~~fD~v~~~~~l~~~~~~---------~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 84 AKNRFRGNLKVKYIEADY-SKYDFE-EKYDMVVSALSIHHLEDE---------DKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp HHHHTCSCTTEEEEESCT-TTCCCC-SCEEEEEEESCGGGSCHH---------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhhccCCCEEEEeCch-hccCCC-CCceEEEEeCccccCCHH---------HHHHHHHHHHHhcCCCcEEEEEE
Confidence 998865 578999998 446665 899999999999999551 14479999999999999999865
No 11
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.80 E-value=1.3e-19 Score=160.62 Aligned_cols=162 Identities=19% Similarity=0.217 Sum_probs=123.9
Q ss_pred ccCCchhhccccccchhHHHHHHHHHHHHHHhC-CCCCCCCCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHH
Q 043626 13 IFYDDTEARKYTSSSRIIDIQAKLSERALELLA-LPDDGVPRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIAL 90 (291)
Q Consensus 13 ~fy~~~~a~~Y~~~~~~~~iq~~~~~~~lelL~-~~~~~~~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~ 90 (291)
.||.+..+..|+...+...........+++++. +++ +.+|||||||+|.++..+++.+ ..|+|+|+|+.|++.|+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~---~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~ 86 (267)
T 3kkz_A 10 DFELNLICDFFSNMERQGPGSPEVTLKALSFIDNLTE---KSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFN 86 (267)
T ss_dssp HHHHHHHHHHHHTSSCSSSCCHHHHHHHHTTCCCCCT---TCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHHhhccccCCCCHHHHHHHHHhcccCCC---CCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHH
Confidence 345555666666554433334456677787776 333 7899999999999999999986 59999999999999998
Q ss_pred hcC------CcceEEEccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC-
Q 043626 91 ERE------VEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP- 163 (291)
Q Consensus 91 ~~~------~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~- 163 (291)
++. ..+.++++|+ ..+++..++||+|+++.+++|+ + +..++..++++|+|||++++....
T Consensus 87 ~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~i~~~~~~~~~-~-----------~~~~l~~~~~~LkpgG~l~~~~~~~ 153 (267)
T 3kkz_A 87 RNARQSGLQNRVTGIVGSM-DDLPFRNEELDLIWSEGAIYNI-G-----------FERGLNEWRKYLKKGGYLAVSECSW 153 (267)
T ss_dssp HHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEESSCGGGT-C-----------HHHHHHHHGGGEEEEEEEEEEEEEE
T ss_pred HHHHHcCCCcCcEEEEcCh-hhCCCCCCCEEEEEEcCCceec-C-----------HHHHHHHHHHHcCCCCEEEEEEeee
Confidence 875 3488999998 5578888999999999999998 5 678999999999999999987421
Q ss_pred --C-Ch--------------HHHHHHHHHHHHcCCCCcEEEeCC
Q 043626 164 --E-SV--------------AQRELILGAAMRAGFAGGVVVDYP 190 (291)
Q Consensus 164 --~-~~--------------~~~~~i~~~~~~aGF~~~~~~~~p 190 (291)
. .. .....+...+.++||....+...|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 197 (267)
T 3kkz_A 154 FTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVATFILP 197 (267)
T ss_dssp SSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEEEECC
T ss_pred cCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEEECC
Confidence 1 11 134567788999999864444444
No 12
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.80 E-value=9.8e-19 Score=150.02 Aligned_cols=138 Identities=22% Similarity=0.199 Sum_probs=114.0
Q ss_pred HHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC---CeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCC
Q 043626 37 SERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG---HQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLG 108 (291)
Q Consensus 37 ~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g---~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~ 108 (291)
.+.+++.+.+.+ +.+|||||||+|.++..+++.+ ..++|+|+|+.|++.|+++. ..+.++.+|+ ..++
T Consensus 26 ~~~~~~~~~~~~---~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~ 101 (219)
T 3dh0_A 26 PEKVLKEFGLKE---GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEE-NKIP 101 (219)
T ss_dssp HHHHHHHHTCCT---TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBT-TBCS
T ss_pred HHHHHHHhCCCC---CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccc-ccCC
Confidence 456777777765 6799999999999999999886 79999999999999998875 3588999998 5577
Q ss_pred CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC----------hHHHHHHHHHHHH
Q 043626 109 LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES----------VAQRELILGAAMR 178 (291)
Q Consensus 109 ~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~----------~~~~~~i~~~~~~ 178 (291)
+..++||+|+++.+++|+.+ ...++.+++++|+|||.+++..+... ....+.+...+.+
T Consensus 102 ~~~~~fD~v~~~~~l~~~~~-----------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (219)
T 3dh0_A 102 LPDNTVDFIFMAFTFHELSE-----------PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILED 170 (219)
T ss_dssp SCSSCEEEEEEESCGGGCSS-----------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHH
T ss_pred CCCCCeeEEEeehhhhhcCC-----------HHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHH
Confidence 88899999999999999976 67899999999999999999753311 1246788899999
Q ss_pred cCCCCcEEEeC
Q 043626 179 AGFAGGVVVDY 189 (291)
Q Consensus 179 aGF~~~~~~~~ 189 (291)
+||....+..+
T Consensus 171 ~Gf~~~~~~~~ 181 (219)
T 3dh0_A 171 AGIRVGRVVEV 181 (219)
T ss_dssp TTCEEEEEEEE
T ss_pred CCCEEEEEEee
Confidence 99986444444
No 13
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.79 E-value=4.7e-19 Score=154.02 Aligned_cols=151 Identities=17% Similarity=0.127 Sum_probs=109.1
Q ss_pred ccCCchhhccccccchhHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhc
Q 043626 13 IFYDDTEARKYTSSSRIIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALER 92 (291)
Q Consensus 13 ~fy~~~~a~~Y~~~~~~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~ 92 (291)
.||+ ..+..|..... .....+.+++.+....+ +.+|||||||+|.++..+++.+..++|+|+|+.|++.|+++
T Consensus 11 ~~~~-~~~~~~~~~~~----~~~~~~~~~~~l~~~~~--~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~ 83 (250)
T 2p7i_A 11 EIKD-TAGHKYAYNFD----FDVMHPFMVRAFTPFFR--PGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGR 83 (250)
T ss_dssp -------------CHH----HHTHHHHHHHHHGGGCC--SSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHH
T ss_pred HHHh-hHHHHhcCccc----hhhHHHHHHHHHHhhcC--CCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHh
Confidence 4555 55666654321 12233455555542222 56899999999999999999999999999999999999998
Q ss_pred CC-cceEEEccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHH-HhccCCcEEEEEEcCCC-----
Q 043626 93 EV-EGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLY-RCLARGARAVFQIYPES----- 165 (291)
Q Consensus 93 ~~-~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~-~~LkpgG~lv~~~~~~~----- 165 (291)
.. .+.++++|+.+. +.+++||+|++..+++|+.+ ...++++++ ++|+|||++++.+....
T Consensus 84 ~~~~v~~~~~d~~~~--~~~~~fD~v~~~~~l~~~~~-----------~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~ 150 (250)
T 2p7i_A 84 LKDGITYIHSRFEDA--QLPRRYDNIVLTHVLEHIDD-----------PVALLKRINDDWLAEGGRLFLVCPNANAVSRQ 150 (250)
T ss_dssp SCSCEEEEESCGGGC--CCSSCEEEEEEESCGGGCSS-----------HHHHHHHHHHTTEEEEEEEEEEEECTTCHHHH
T ss_pred hhCCeEEEEccHHHc--CcCCcccEEEEhhHHHhhcC-----------HHHHHHHHHHHhcCCCCEEEEEcCChHHHHHH
Confidence 76 689999998543 45789999999999999977 678999999 99999999999763211
Q ss_pred -------------------------hHHHHHHHHHHHHcCCCC
Q 043626 166 -------------------------VAQRELILGAAMRAGFAG 183 (291)
Q Consensus 166 -------------------------~~~~~~i~~~~~~aGF~~ 183 (291)
....+.+..++.++||..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 193 (250)
T 2p7i_A 151 IAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQV 193 (250)
T ss_dssp HHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEE
T ss_pred HHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeE
Confidence 123557788888999975
No 14
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.79 E-value=8.6e-19 Score=154.25 Aligned_cols=136 Identities=21% Similarity=0.211 Sum_probs=112.3
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc-CCeEEEEeCCHHHHHHHHhcC---CcceEEEccCCCCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN-GHQWIGLDISQSMLNIALERE---VEGDLLLGDMGQGLGLR 110 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~---~~~~~~~~D~~~~~~~~ 110 (291)
...+.+++.+.+.+ +.+|||||||+|.++..+++. +..|+|+|+|+.|++.|+++. ..+.++++|+. .++++
T Consensus 42 ~~~~~~~~~~~~~~---~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-~~~~~ 117 (266)
T 3ujc_A 42 EATKKILSDIELNE---NSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDIL-TKEFP 117 (266)
T ss_dssp HHHHHHTTTCCCCT---TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTT-TCCCC
T ss_pred HHHHHHHHhcCCCC---CCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccc-cCCCC
Confidence 45567777776665 679999999999999999987 799999999999999999987 45899999984 46888
Q ss_pred CCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC-------------------hHHHHH
Q 043626 111 PGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES-------------------VAQREL 171 (291)
Q Consensus 111 ~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~-------------------~~~~~~ 171 (291)
+++||+|++..+++|++. .....++.+++++|+|||.+++...... ....+.
T Consensus 118 ~~~fD~v~~~~~l~~~~~---------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (266)
T 3ujc_A 118 ENNFDLIYSRDAILALSL---------ENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEE 188 (266)
T ss_dssp TTCEEEEEEESCGGGSCH---------HHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHH
T ss_pred CCcEEEEeHHHHHHhcCh---------HHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHH
Confidence 899999999999999822 2278999999999999999999753211 123567
Q ss_pred HHHHHHHcCCCC
Q 043626 172 ILGAAMRAGFAG 183 (291)
Q Consensus 172 i~~~~~~aGF~~ 183 (291)
+...+.++||..
T Consensus 189 ~~~~l~~~Gf~~ 200 (266)
T 3ujc_A 189 YADILTACNFKN 200 (266)
T ss_dssp HHHHHHHTTCEE
T ss_pred HHHHHHHcCCeE
Confidence 888899999976
No 15
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.79 E-value=5.7e-19 Score=157.28 Aligned_cols=97 Identities=20% Similarity=0.322 Sum_probs=82.8
Q ss_pred CCeEEEEcCCCchhHHHHHHc----CCeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCCCCCcccEEEECC
Q 043626 52 PRLLLDIGCGSGLSGETLSEN----GHQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGLRPGVVDGAISIS 121 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~----g~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~~~~~fD~Vis~~ 121 (291)
+.+|||||||+|..+..|++. |.+|+|||+|+.||+.|+++.. .++++++|+ ..+++ +.||+|++++
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~-~~~~~--~~~d~v~~~~ 147 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDI-RDIAI--ENASMVVLNF 147 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCT-TTCCC--CSEEEEEEES
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccc-ccccc--cccccceeee
Confidence 679999999999999999876 4689999999999999998642 478999998 44565 5799999999
Q ss_pred chhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 122 AVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 122 ~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
++||+++ .....+|++++++|+|||++++.
T Consensus 148 ~l~~~~~---------~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 148 TLQFLEP---------SERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp CGGGSCH---------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eeeecCc---------hhHhHHHHHHHHHcCCCcEEEEE
Confidence 9999854 22467999999999999999985
No 16
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.79 E-value=3.8e-19 Score=158.13 Aligned_cols=139 Identities=23% Similarity=0.270 Sum_probs=101.7
Q ss_pred hhhccccccchhHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcce
Q 043626 18 TEARKYTSSSRIIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEGD 97 (291)
Q Consensus 18 ~~a~~Y~~~~~~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~ 97 (291)
..|..|+.... .+..++.+.+.+... . ..+|||||||+|.++..|++.+.+|+|+|+|+.|++.|++ ..++.
T Consensus 13 ~~a~~Y~~~Rp--~yp~~l~~~l~~~~~--~---~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~-~~~v~ 84 (257)
T 4hg2_A 13 PVADAYRAFRP--RYPRALFRWLGEVAP--A---RGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALR-HPRVT 84 (257)
T ss_dssp -------CCCC--CCCHHHHHHHHHHSS--C---SSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCC-CTTEE
T ss_pred HHHHHHHHHCC--CcHHHHHHHHHHhcC--C---CCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhh-cCCce
Confidence 56777876421 111244555555532 2 4599999999999999999999999999999999998865 46789
Q ss_pred EEEccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC--hHHHHHHHHH
Q 043626 98 LLLGDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES--VAQRELILGA 175 (291)
Q Consensus 98 ~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~--~~~~~~i~~~ 175 (291)
++++|+ +.+++++++||+|+|..++||+. ...++.+++++|||||.|++..|... ...+..+...
T Consensus 85 ~~~~~~-e~~~~~~~sfD~v~~~~~~h~~~------------~~~~~~e~~rvLkpgG~l~~~~~~~~~~~~~~~~~~~~ 151 (257)
T 4hg2_A 85 YAVAPA-EDTGLPPASVDVAIAAQAMHWFD------------LDRFWAELRRVARPGAVFAAVTYGLTRVDPEVDAVVDR 151 (257)
T ss_dssp EEECCT-TCCCCCSSCEEEEEECSCCTTCC------------HHHHHHHHHHHEEEEEEEEEEEECCCBCCHHHHHHHHH
T ss_pred eehhhh-hhhcccCCcccEEEEeeehhHhh------------HHHHHHHHHHHcCCCCEEEEEECCCCCCCHHHHHHHHH
Confidence 999998 56899999999999999999873 45789999999999999998776532 2344444444
Q ss_pred HH
Q 043626 176 AM 177 (291)
Q Consensus 176 ~~ 177 (291)
+.
T Consensus 152 ~~ 153 (257)
T 4hg2_A 152 LY 153 (257)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 17
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.79 E-value=2.2e-18 Score=152.86 Aligned_cols=141 Identities=17% Similarity=0.238 Sum_probs=116.2
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc-CCeEEEEeCCHHHHHHHHhcCC------cceEEE
Q 043626 28 RIIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN-GHQWIGLDISQSMLNIALEREV------EGDLLL 100 (291)
Q Consensus 28 ~~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~------~~~~~~ 100 (291)
.+...+..+.+.+++.+.+.+ +.+|||||||+|.++..+++. +..|+|+|+|+.+++.|+++.. .+.++.
T Consensus 41 ~~~~~~~~~~~~l~~~~~~~~---~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~ 117 (273)
T 3bus_A 41 SVDDATDRLTDEMIALLDVRS---GDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSY 117 (273)
T ss_dssp CHHHHHHHHHHHHHHHSCCCT---TCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CHHHHHHHHHHHHHHhcCCCC---CCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 456677888899999988766 779999999999999999875 7899999999999999987642 478999
Q ss_pred ccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC----h----------
Q 043626 101 GDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES----V---------- 166 (291)
Q Consensus 101 ~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~----~---------- 166 (291)
+|+ ..+++++++||+|++..+++|+.+ ...+|..++++|+|||++++...... .
T Consensus 118 ~d~-~~~~~~~~~fD~v~~~~~l~~~~~-----------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~ 185 (273)
T 3bus_A 118 ADA-MDLPFEDASFDAVWALESLHHMPD-----------RGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFR 185 (273)
T ss_dssp CCT-TSCCSCTTCEEEEEEESCTTTSSC-----------HHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHH
T ss_pred Ccc-ccCCCCCCCccEEEEechhhhCCC-----------HHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHH
Confidence 998 457888899999999999999977 57899999999999999998653210 0
Q ss_pred --------HHHHHHHHHHHHcCCCC
Q 043626 167 --------AQRELILGAAMRAGFAG 183 (291)
Q Consensus 167 --------~~~~~i~~~~~~aGF~~ 183 (291)
.....+..++.++||..
T Consensus 186 ~~~~~~~~~~~~~~~~~l~~aGf~~ 210 (273)
T 3bus_A 186 AGGGVLSLGGIDEYESDVRQAELVV 210 (273)
T ss_dssp HHHTCCCCCCHHHHHHHHHHTTCEE
T ss_pred hhcCccCCCCHHHHHHHHHHcCCeE
Confidence 12356677788888875
No 18
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.79 E-value=2.3e-19 Score=153.53 Aligned_cols=110 Identities=15% Similarity=0.141 Sum_probs=90.4
Q ss_pred HHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC-----------------CcceEEE
Q 043626 38 ERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE-----------------VEGDLLL 100 (291)
Q Consensus 38 ~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~-----------------~~~~~~~ 100 (291)
...++.+.+++ +.+|||+|||+|..+..|++.|..|+|+|+|+.|++.|+++. ..+.+++
T Consensus 12 ~~~~~~l~~~~---~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 88 (203)
T 1pjz_A 12 QQYWSSLNVVP---GARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWC 88 (203)
T ss_dssp HHHHHHHCCCT---TCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEE
T ss_pred HHHHHhcccCC---CCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEE
Confidence 34455666655 679999999999999999999999999999999999998763 3578999
Q ss_pred ccCCCCCCCCC-CcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 101 GDMGQGLGLRP-GVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 101 ~D~~~~~~~~~-~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+|+. .+++.+ ++||+|++..+++|++. .....++++++++|+|||++++.
T Consensus 89 ~d~~-~l~~~~~~~fD~v~~~~~l~~l~~---------~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 89 GDFF-ALTARDIGHCAAFYDRAAMIALPA---------DMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp ECCS-SSTHHHHHSEEEEEEESCGGGSCH---------HHHHHHHHHHHHHSCSEEEEEEE
T ss_pred Cccc-cCCcccCCCEEEEEECcchhhCCH---------HHHHHHHHHHHHHcCCCcEEEEE
Confidence 9984 466654 79999999999999843 22567999999999999984443
No 19
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.79 E-value=2.2e-19 Score=153.51 Aligned_cols=154 Identities=18% Similarity=0.179 Sum_probs=117.2
Q ss_pred cCCchhhccccccchhHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC
Q 043626 14 FYDDTEARKYTSSSRIIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE 93 (291)
Q Consensus 14 fy~~~~a~~Y~~~~~~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~ 93 (291)
||+ ..+..|+.. ...........+++.+....+ +.+|||||||+|.++..+++.+..++|+|+|+.|++.|++..
T Consensus 14 ~~~-~~a~~y~~~--~~~~~~~~~~~~~~~l~~~~~--~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~ 88 (218)
T 3ou2_A 14 YYR-ARASEYDAT--FVPYMDSAAPAALERLRAGNI--RGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGRHG 88 (218)
T ss_dssp HHH-HHGGGHHHH--HHHHHTTTHHHHHHHHTTTTS--CSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGGGC
T ss_pred HHH-HHHHHHHHh--hhhHHHHHHHHHHHHHhcCCC--CCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHhcC
Confidence 444 556666552 122222335567777763332 679999999999999999999999999999999999999855
Q ss_pred -CcceEEEccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC-------
Q 043626 94 -VEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES------- 165 (291)
Q Consensus 94 -~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~------- 165 (291)
..+.++.+|+.. + +..++||+|+++.+++|+.+ ..+..++..++++|+|||.+++......
T Consensus 89 ~~~~~~~~~d~~~-~-~~~~~~D~v~~~~~l~~~~~---------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 157 (218)
T 3ou2_A 89 LDNVEFRQQDLFD-W-TPDRQWDAVFFAHWLAHVPD---------DRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQ 157 (218)
T ss_dssp CTTEEEEECCTTS-C-CCSSCEEEEEEESCGGGSCH---------HHHHHHHHHHHHHEEEEEEEEEEEECCCC------
T ss_pred CCCeEEEeccccc-C-CCCCceeEEEEechhhcCCH---------HHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchh
Confidence 568999999854 3 66899999999999999865 2257899999999999999998743211
Q ss_pred ------------------------hHHHHHHHHHHHHcCCCC
Q 043626 166 ------------------------VAQRELILGAAMRAGFAG 183 (291)
Q Consensus 166 ------------------------~~~~~~i~~~~~~aGF~~ 183 (291)
....+.+..++.++||..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v 199 (218)
T 3ou2_A 158 DDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSC 199 (218)
T ss_dssp ------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred hhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEE
Confidence 114567888899999973
No 20
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.79 E-value=2.1e-18 Score=151.11 Aligned_cols=142 Identities=17% Similarity=0.105 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcCC---cceEEEccCCCCC
Q 043626 32 IQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALEREV---EGDLLLGDMGQGL 107 (291)
Q Consensus 32 iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~~---~~~~~~~D~~~~~ 107 (291)
........+++.+...+ +.+|||||||+|.++..|+..+ ..++|+|+|+.|++.|+++.. .+.++++|+ ..+
T Consensus 77 ~~~~~~~~~l~~l~~~~---~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~-~~~ 152 (254)
T 1xtp_A 77 VDIEGSRNFIASLPGHG---TSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASM-ETA 152 (254)
T ss_dssp HHHHHHHHHHHTSTTCC---CSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCG-GGC
T ss_pred HHHHHHHHHHHhhcccC---CCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccH-HHC
Confidence 34455566777765544 6799999999999999999885 679999999999999998874 578999998 446
Q ss_pred CCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC-------------hHHHHHHHH
Q 043626 108 GLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES-------------VAQRELILG 174 (291)
Q Consensus 108 ~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~-------------~~~~~~i~~ 174 (291)
++++++||+|++..+++|+.+ ..+..++..++++|+|||.+++...... ....+.+..
T Consensus 153 ~~~~~~fD~v~~~~~l~~~~~---------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (254)
T 1xtp_A 153 TLPPNTYDLIVIQWTAIYLTD---------ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKR 223 (254)
T ss_dssp CCCSSCEEEEEEESCGGGSCH---------HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHH
T ss_pred CCCCCCeEEEEEcchhhhCCH---------HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHH
Confidence 777889999999999999843 2267999999999999999999763110 123577889
Q ss_pred HHHHcCCCCcEE
Q 043626 175 AAMRAGFAGGVV 186 (291)
Q Consensus 175 ~~~~aGF~~~~~ 186 (291)
++.++||....+
T Consensus 224 ~l~~aGf~~~~~ 235 (254)
T 1xtp_A 224 LFNESGVRVVKE 235 (254)
T ss_dssp HHHHHTCCEEEE
T ss_pred HHHHCCCEEEEe
Confidence 999999987333
No 21
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.78 E-value=2.2e-18 Score=154.89 Aligned_cols=141 Identities=17% Similarity=0.072 Sum_probs=117.1
Q ss_pred hhHHHHHHHHHHHHHHh----CCCCCCCCCeEEEEcCCCchhHHHHHHc-CCeEEEEeCCHHHHHHHHhcC------Ccc
Q 043626 28 RIIDIQAKLSERALELL----ALPDDGVPRLLLDIGCGSGLSGETLSEN-GHQWIGLDISQSMLNIALERE------VEG 96 (291)
Q Consensus 28 ~~~~iq~~~~~~~lelL----~~~~~~~~~~VLDiGcGsG~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~------~~~ 96 (291)
.+...+..+.+.+++.+ .+.+ +.+|||||||+|.++..|++. +..++|+|+|+.|++.|+++. ..+
T Consensus 58 ~~~~~~~~~~~~l~~~l~~~~~~~~---~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~ 134 (297)
T 2o57_A 58 EIREASLRTDEWLASELAMTGVLQR---QAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNI 134 (297)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCCT---TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTE
T ss_pred chHHHHHHHHHHHHHHhhhccCCCC---CCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcce
Confidence 35567778888999998 6665 779999999999999999987 789999999999999998764 347
Q ss_pred eEEEccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC-----------
Q 043626 97 DLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES----------- 165 (291)
Q Consensus 97 ~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~----------- 165 (291)
.++++|+ ..+|+++++||+|++..+++|+.+ ...+|.+++++|+|||++++......
T Consensus 135 ~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~ 202 (297)
T 2o57_A 135 TVKYGSF-LEIPCEDNSYDFIWSQDAFLHSPD-----------KLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPI 202 (297)
T ss_dssp EEEECCT-TSCSSCTTCEEEEEEESCGGGCSC-----------HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHH
T ss_pred EEEEcCc-ccCCCCCCCEeEEEecchhhhcCC-----------HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHH
Confidence 8999998 457888899999999999999976 67899999999999999999743110
Q ss_pred --------hHHHHHHHHHHHHcCCCC
Q 043626 166 --------VAQRELILGAAMRAGFAG 183 (291)
Q Consensus 166 --------~~~~~~i~~~~~~aGF~~ 183 (291)
......+..++.++||..
T Consensus 203 ~~~~~~~~~~~~~~~~~~l~~aGf~~ 228 (297)
T 2o57_A 203 LDRIKLHDMGSLGLYRSLAKECGLVT 228 (297)
T ss_dssp HHHHTCSSCCCHHHHHHHHHHTTEEE
T ss_pred HHHhcCCCCCCHHHHHHHHHHCCCeE
Confidence 013456677888999975
No 22
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.78 E-value=1.8e-18 Score=152.17 Aligned_cols=129 Identities=16% Similarity=0.260 Sum_probs=102.1
Q ss_pred hhhccccccchh-HHHHHHHHHHHHHHh-CCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC--
Q 043626 18 TEARKYTSSSRI-IDIQAKLSERALELL-ALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE-- 93 (291)
Q Consensus 18 ~~a~~Y~~~~~~-~~iq~~~~~~~lelL-~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~-- 93 (291)
..+..|+..... ......+.+.+++++ .+.+ +.+|||||||+|.++..+++.+..++|+|+|+.|++.|+++.
T Consensus 7 ~~a~~y~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~ 83 (263)
T 2yqz_A 7 RAAYAYDRLRAHPPEVAGQIATAMASAVHPKGE---EPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAG 83 (263)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCSSS---CCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTT
T ss_pred HHHHHHhhhcccChHHHHHHHHHHHHhhcCCCC---CCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc
Confidence 456666654322 222333444443322 3333 679999999999999999999999999999999999999884
Q ss_pred --CcceEEEccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 94 --VEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 94 --~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
..+.++.+|+ ..+++.+++||+|++..+++|+.+ ...++.+++++|+|||.+++.+
T Consensus 84 ~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~-----------~~~~l~~~~~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 84 VDRKVQVVQADA-RAIPLPDESVHGVIVVHLWHLVPD-----------WPKVLAEAIRVLKPGGALLEGW 141 (263)
T ss_dssp SCTTEEEEESCT-TSCCSCTTCEEEEEEESCGGGCTT-----------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCceEEEEccc-ccCCCCCCCeeEEEECCchhhcCC-----------HHHHHHHHHHHCCCCcEEEEEe
Confidence 4588999998 557888899999999999999976 6789999999999999999873
No 23
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.78 E-value=2.2e-18 Score=150.59 Aligned_cols=134 Identities=16% Similarity=0.135 Sum_probs=110.5
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLGL 109 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~~ 109 (291)
.....+++.+.+.+ +.+|||||||+|.++..+++.+..++|+|+|+.|++.++++. .++.++.+|+ ..+++
T Consensus 8 ~~~~~~~~~~~~~~---~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~ 83 (239)
T 1xxl_A 8 HSLGLMIKTAECRA---EHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA-ESLPF 83 (239)
T ss_dssp HHHHHHHHHHTCCT---TCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT-TBCCS
T ss_pred CCcchHHHHhCcCC---CCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccc-ccCCC
Confidence 34556778888876 789999999999999999999999999999999999998764 4578999998 55788
Q ss_pred CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC--CC--------------------hH
Q 043626 110 RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP--ES--------------------VA 167 (291)
Q Consensus 110 ~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~--~~--------------------~~ 167 (291)
.+++||+|++..+++|+.+ +..++.+++++|+|||++++.... .. ..
T Consensus 84 ~~~~fD~v~~~~~l~~~~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (239)
T 1xxl_A 84 PDDSFDIITCRYAAHHFSD-----------VRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRES 152 (239)
T ss_dssp CTTCEEEEEEESCGGGCSC-----------HHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCC
T ss_pred CCCcEEEEEECCchhhccC-----------HHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCC
Confidence 8899999999999999976 678999999999999999986422 11 11
Q ss_pred HHHHHHHHHHHcCCCC
Q 043626 168 QRELILGAAMRAGFAG 183 (291)
Q Consensus 168 ~~~~i~~~~~~aGF~~ 183 (291)
....+..++.++||..
T Consensus 153 ~~~~~~~ll~~aGf~~ 168 (239)
T 1xxl_A 153 SLSEWQAMFSANQLAY 168 (239)
T ss_dssp BHHHHHHHHHHTTEEE
T ss_pred CHHHHHHHHHHCCCcE
Confidence 2445677777888875
No 24
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.78 E-value=1.2e-18 Score=155.48 Aligned_cols=113 Identities=23% Similarity=0.382 Sum_probs=99.9
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcc
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVV 114 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~f 114 (291)
.+.+.+++.+...+ +.+|||||||+|.++..+++.+..|+|+|+|+.|++.++++...+.++.+|+. .+++ +++|
T Consensus 44 ~~~~~l~~~l~~~~---~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~~-~~~f 118 (279)
T 3ccf_A 44 QYGEDLLQLLNPQP---GEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNYPHLHFDVADAR-NFRV-DKPL 118 (279)
T ss_dssp SSCCHHHHHHCCCT---TCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSCEEECCTT-TCCC-SSCE
T ss_pred HHHHHHHHHhCCCC---CCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhCCCCEEEECChh-hCCc-CCCc
Confidence 45566777777655 67999999999999999999889999999999999999998888999999984 4676 6899
Q ss_pred cEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC
Q 043626 115 DGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP 163 (291)
Q Consensus 115 D~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~ 163 (291)
|+|++..+++|+.+ ...++.+++++|+|||++++.+..
T Consensus 119 D~v~~~~~l~~~~d-----------~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 119 DAVFSNAMLHWVKE-----------PEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp EEEEEESCGGGCSC-----------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CEEEEcchhhhCcC-----------HHHHHHHHHHhcCCCcEEEEEecC
Confidence 99999999999977 678999999999999999998754
No 25
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.78 E-value=1.2e-18 Score=153.18 Aligned_cols=124 Identities=22% Similarity=0.275 Sum_probs=104.3
Q ss_pred hccccccchhHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCCcce
Q 043626 20 ARKYTSSSRIIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALEREVEGD 97 (291)
Q Consensus 20 a~~Y~~~~~~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~~~~ 97 (291)
+..|+..... +......+++.+...+ +.+|||||||+|.++..+++. +..++|+|+|+.|++.++++...+.
T Consensus 8 ~~~y~~~~~~---~~~~~~~l~~~~~~~~---~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~ 81 (259)
T 2p35_A 8 AQQYLKFEDE---RTRPARDLLAQVPLER---VLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTN 81 (259)
T ss_dssp CGGGBCCCCG---GGHHHHHHHTTCCCSC---CSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSE
T ss_pred HHHHHHHHHH---HHHHHHHHHHhcCCCC---CCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcE
Confidence 5566665432 3345566777776654 679999999999999999988 7899999999999999999888899
Q ss_pred EEEccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc
Q 043626 98 LLLGDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 162 (291)
Q Consensus 98 ~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~ 162 (291)
++.+|+.. ++ .+++||+|+++.+++|+.+ ...++.+++++|+|||.+++.+.
T Consensus 82 ~~~~d~~~-~~-~~~~fD~v~~~~~l~~~~~-----------~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 82 FGKADLAT-WK-PAQKADLLYANAVFQWVPD-----------HLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp EEECCTTT-CC-CSSCEEEEEEESCGGGSTT-----------HHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EEECChhh-cC-ccCCcCEEEEeCchhhCCC-----------HHHHHHHHHHhcCCCeEEEEEeC
Confidence 99999844 55 6789999999999999976 67899999999999999999864
No 26
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.78 E-value=5.2e-19 Score=155.41 Aligned_cols=150 Identities=18% Similarity=0.214 Sum_probs=114.5
Q ss_pred hccccccchhHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcCCc---
Q 043626 20 ARKYTSSSRIIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALEREVE--- 95 (291)
Q Consensus 20 a~~Y~~~~~~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~~~--- 95 (291)
...|....+...........+++.+....+ +.+|||||||+|.++..+++.+ ..|+|+|+|+.+++.|+++...
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~--~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 94 (257)
T 3f4k_A 17 CNYFKLLKRQGPGSPEATRKAVSFINELTD--DAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANC 94 (257)
T ss_dssp HHHHTTSSCSSSCCHHHHHHHHTTSCCCCT--TCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHcCccccCCCCHHHHHHHHHHHhcCCC--CCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCC
Confidence 344444433222233556677777743332 6799999999999999999986 4999999999999999887532
Q ss_pred ---ceEEEccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc---CCC----
Q 043626 96 ---GDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY---PES---- 165 (291)
Q Consensus 96 ---~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~---~~~---- 165 (291)
+.++++|+ ..+++.+++||+|+++.+++|+ + ...++..++++|+|||++++... ...
T Consensus 95 ~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~-~-----------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 161 (257)
T 3f4k_A 95 ADRVKGITGSM-DNLPFQNEELDLIWSEGAIYNI-G-----------FERGMNEWSKYLKKGGFIAVSEASWFTSERPAE 161 (257)
T ss_dssp TTTEEEEECCT-TSCSSCTTCEEEEEEESCSCCC-C-----------HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHH
T ss_pred CCceEEEECCh-hhCCCCCCCEEEEEecChHhhc-C-----------HHHHHHHHHHHcCCCcEEEEEEeeccCCCChHH
Confidence 78999998 6678888999999999999998 4 56899999999999999999752 111
Q ss_pred -----------hHHHHHHHHHHHHcCCCCc
Q 043626 166 -----------VAQRELILGAAMRAGFAGG 184 (291)
Q Consensus 166 -----------~~~~~~i~~~~~~aGF~~~ 184 (291)
......+...+.++||...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v 191 (257)
T 3f4k_A 162 IEDFWMDAYPEISVIPTCIDKMERAGYTPT 191 (257)
T ss_dssp HHHHHHHHCTTCCBHHHHHHHHHHTTEEEE
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHCCCeEE
Confidence 1124567788899999763
No 27
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.77 E-value=1.9e-19 Score=169.95 Aligned_cols=168 Identities=18% Similarity=0.236 Sum_probs=124.1
Q ss_pred CCcccCCchhhccccccchhHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHH
Q 043626 10 PPEIFYDDTEARKYTSSSRIIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIA 89 (291)
Q Consensus 10 ppe~fy~~~~a~~Y~~~~~~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a 89 (291)
+|+.+|++..+.....+..+......+.+.+++.+.+.+ +.+|||||||+|.++..|++.|..++|+|+|+.|++.|
T Consensus 69 ~~~~~y~~~y~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a 145 (416)
T 4e2x_A 69 PRDLMFHEVYPYHSSGSSVMREHFAMLARDFLATELTGP---DPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKA 145 (416)
T ss_dssp CHHHHSSTTCCCCGGGCHHHHHHHHHHHHHHHHTTTCSS---SCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHH
T ss_pred CHHHhccCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCC---CCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHH
Confidence 445556533332222233455667778888888887765 67999999999999999999999999999999999999
Q ss_pred HhcCCcc--eEEEccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC----
Q 043626 90 LEREVEG--DLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP---- 163 (291)
Q Consensus 90 ~~~~~~~--~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~---- 163 (291)
+++.... .++..+....+++.+++||+|+++.+++|+.+ +..+|++++++|+|||++++.+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~d-----------~~~~l~~~~r~LkpgG~l~i~~~~~~~~ 214 (416)
T 4e2x_A 146 REKGIRVRTDFFEKATADDVRRTEGPANVIYAANTLCHIPY-----------VQSVLEGVDALLAPDGVFVFEDPYLGDI 214 (416)
T ss_dssp HTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGGCTT-----------HHHHHHHHHHHEEEEEEEEEEEECHHHH
T ss_pred HHcCCCcceeeechhhHhhcccCCCCEEEEEECChHHhcCC-----------HHHHHHHHHHHcCCCeEEEEEeCChHHh
Confidence 9873321 11111111334566789999999999999976 789999999999999999997521
Q ss_pred -----------C--ChHHHHHHHHHHHHcCCCCcEEEeCCC
Q 043626 164 -----------E--SVAQRELILGAAMRAGFAGGVVVDYPH 191 (291)
Q Consensus 164 -----------~--~~~~~~~i~~~~~~aGF~~~~~~~~p~ 191 (291)
. .....+.+..++.++||....+..+|.
T Consensus 215 ~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~~~~ 255 (416)
T 4e2x_A 215 VAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQRLPV 255 (416)
T ss_dssp HHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEEECG
T ss_pred hhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEEccC
Confidence 1 112456789999999998755555553
No 28
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.77 E-value=3.9e-18 Score=153.83 Aligned_cols=174 Identities=16% Similarity=0.229 Sum_probs=119.1
Q ss_pred ccCCchhhccccccchhHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhc
Q 043626 13 IFYDDTEARKYTSSSRIIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALER 92 (291)
Q Consensus 13 ~fy~~~~a~~Y~~~~~~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~ 92 (291)
.||+...+..|+...... ........+++.+... +.+|||||||+|.++..|++.+..|+|+|+|+.|++.|+++
T Consensus 49 ~~y~~~~~~~y~~~~~~~-~~~~~~~~~~~~~~~~----~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~ 123 (299)
T 3g2m_A 49 DFYDEGAADTYRDLIQDA-DGTSEAREFATRTGPV----SGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKR 123 (299)
T ss_dssp ECC--------------C-CCHHHHHHHHHHHCCC----CSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHhccc-CccHHHHHHHHhhCCC----CCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHH
Confidence 467755556665543210 1134456667777644 34999999999999999999999999999999999999987
Q ss_pred CC--------cceEEEccCCCCCCCCCCcccEEEEC-CchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC
Q 043626 93 EV--------EGDLLLGDMGQGLGLRPGVVDGAISI-SAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP 163 (291)
Q Consensus 93 ~~--------~~~~~~~D~~~~~~~~~~~fD~Vis~-~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~ 163 (291)
.. .+.++++|+. .+++ +++||+|++. .+++|+. ......+|.+++++|+|||++++.++.
T Consensus 124 ~~~~~~~~~~~v~~~~~d~~-~~~~-~~~fD~v~~~~~~~~~~~---------~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 124 LAEAPADVRDRCTLVQGDMS-AFAL-DKRFGTVVISSGSINELD---------EADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp HHTSCHHHHTTEEEEECBTT-BCCC-SCCEEEEEECHHHHTTSC---------HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HhhcccccccceEEEeCchh-cCCc-CCCcCEEEECCcccccCC---------HHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 53 4789999994 4666 7899999975 5566653 233679999999999999999997543
Q ss_pred CCh--------------------------------------------------------HHHHHHHHHHHHcCCCCcEEE
Q 043626 164 ESV--------------------------------------------------------AQRELILGAAMRAGFAGGVVV 187 (291)
Q Consensus 164 ~~~--------------------------------------------------------~~~~~i~~~~~~aGF~~~~~~ 187 (291)
... ...+.+..++.++||....+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~ 272 (299)
T 3g2m_A 193 SEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQT 272 (299)
T ss_dssp CHHHHSCCCCC-------------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEE
T ss_pred CccccccchhccceeecCCCcEEEEEEEEeccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEE
Confidence 221 156789999999999976666
Q ss_pred eCCCCCCCCcEEEEE
Q 043626 188 DYPHSSKSRKEFLVL 202 (291)
Q Consensus 188 ~~p~~~~~~~~~l~l 202 (291)
.++.........+++
T Consensus 273 ~~~~~g~~~~~~~lv 287 (299)
T 3g2m_A 273 PFASGGAGRKDMVLV 287 (299)
T ss_dssp EECTTSSSSCCEEEE
T ss_pred ecCCCCCCccceeee
Confidence 666544333334444
No 29
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.77 E-value=2.2e-18 Score=151.23 Aligned_cols=135 Identities=18% Similarity=0.102 Sum_probs=110.2
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc-CCeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN-GHQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGL 107 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~ 107 (291)
...+.+++.+.+.+ +.+|||||||+|.++..+++. +..++|+|+|+.|++.|+++. ..+.++++|+.+ +
T Consensus 23 ~~~~~l~~~~~~~~---~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~-~ 98 (256)
T 1nkv_A 23 EKYATLGRVLRMKP---GTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG-Y 98 (256)
T ss_dssp HHHHHHHHHTCCCT---TCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT-C
T ss_pred HHHHHHHHhcCCCC---CCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh-C
Confidence 55677788887765 779999999999999999987 679999999999999998764 247899999844 5
Q ss_pred CCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc--CCC-----------------hHH
Q 043626 108 GLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY--PES-----------------VAQ 168 (291)
Q Consensus 108 ~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~--~~~-----------------~~~ 168 (291)
++ +++||+|+|..+++|+.+ ...+|.+++++|+|||++++... ... ...
T Consensus 99 ~~-~~~fD~V~~~~~~~~~~~-----------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (256)
T 1nkv_A 99 VA-NEKCDVAACVGATWIAGG-----------FAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLT 166 (256)
T ss_dssp CC-SSCEEEEEEESCGGGTSS-----------SHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCC
T ss_pred Cc-CCCCCEEEECCChHhcCC-----------HHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCC
Confidence 66 789999999999999876 56899999999999999998642 111 112
Q ss_pred HHHHHHHHHHcCCCCcE
Q 043626 169 RELILGAAMRAGFAGGV 185 (291)
Q Consensus 169 ~~~i~~~~~~aGF~~~~ 185 (291)
...+...+.++||....
T Consensus 167 ~~~~~~~l~~aGf~~~~ 183 (256)
T 1nkv_A 167 LPGLVGAFDDLGYDVVE 183 (256)
T ss_dssp HHHHHHHHHTTTBCCCE
T ss_pred HHHHHHHHHHCCCeeEE
Confidence 35788889999998733
No 30
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.77 E-value=2.1e-18 Score=149.96 Aligned_cols=108 Identities=25% Similarity=0.312 Sum_probs=93.6
Q ss_pred HHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCC-eEEEEeCCHHHHHHHHhcCC--cceEEEccCCCCCCCCCCccc
Q 043626 39 RALELLALPDDGVPRLLLDIGCGSGLSGETLSENGH-QWIGLDISQSMLNIALEREV--EGDLLLGDMGQGLGLRPGVVD 115 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~-~v~gvDis~~ml~~a~~~~~--~~~~~~~D~~~~~~~~~~~fD 115 (291)
.+.+++...+ +.+|||||||+|.++..+++.+. .++|+|+|+.|++.|+++.. .+.++.+|+. .+++..++||
T Consensus 34 ~l~~~~~~~~---~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~-~~~~~~~~fD 109 (243)
T 3bkw_A 34 ALRAMLPEVG---GLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDTGITYERADLD-KLHLPQDSFD 109 (243)
T ss_dssp HHHHHSCCCT---TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGG-GCCCCTTCEE
T ss_pred HHHHhccccC---CCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChh-hccCCCCCce
Confidence 4555665444 67999999999999999999987 99999999999999998875 4788999984 4677788999
Q ss_pred EEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 116 GAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 116 ~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
+|++..+++|+.+ ...++..++++|+|||++++.+
T Consensus 110 ~v~~~~~l~~~~~-----------~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 110 LAYSSLALHYVED-----------VARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp EEEEESCGGGCSC-----------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeccccccch-----------HHHHHHHHHHhcCcCcEEEEEe
Confidence 9999999999976 6789999999999999999965
No 31
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.77 E-value=2.6e-17 Score=137.61 Aligned_cols=122 Identities=24% Similarity=0.306 Sum_probs=106.4
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEEC-Cchhhhcccc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISI-SAVQWLCNAD 130 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~-~~l~~l~~~~ 130 (291)
+.+|||||||+|.++..++..+..++|+|+|+.+++.++++...+.++.+|+.. +++++++||+|+++ .+++|+..
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~~~~D~i~~~~~~~~~~~~-- 123 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFPEARWVVGDLSV-DQISETDFDLIVSAGNVMGFLAE-- 123 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSEEEECCTTT-SCCCCCCEEEEEECCCCGGGSCH--
T ss_pred CCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCCCCcEEEccccc-CCCCCCceeEEEECCcHHhhcCh--
Confidence 679999999999999999999999999999999999999998889999999854 56777899999998 67887632
Q ss_pred ccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 131 KASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 131 ~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
.....++..+.++|+|||.+++.+..........+...+.++||..
T Consensus 124 -------~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~ 169 (195)
T 3cgg_A 124 -------DGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLEL 169 (195)
T ss_dssp -------HHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEE
T ss_pred -------HHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEE
Confidence 2267899999999999999999886655556778889999999986
No 32
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.76 E-value=1.1e-17 Score=143.58 Aligned_cols=131 Identities=21% Similarity=0.217 Sum_probs=106.6
Q ss_pred HHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC-cceEEEccCCCCCCCCCCcccEE
Q 043626 39 RALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV-EGDLLLGDMGQGLGLRPGVVDGA 117 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~-~~~~~~~D~~~~~~~~~~~fD~V 117 (291)
.+++.+...+ +.+|||||||+|.++..|++.+..++|+|+|+.|++.++++.. .+.++.+|+ ..+++. ++||+|
T Consensus 36 ~~l~~~~~~~---~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~-~~~~~~-~~fD~v 110 (220)
T 3hnr_A 36 DILEDVVNKS---FGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLPKEFSITEGDF-LSFEVP-TSIDTI 110 (220)
T ss_dssp HHHHHHHHTC---CSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSCTTCCEESCCS-SSCCCC-SCCSEE
T ss_pred HHHHHhhccC---CCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCCceEEEeCCh-hhcCCC-CCeEEE
Confidence 4455554444 6799999999999999999999999999999999999999887 789999998 446766 999999
Q ss_pred EECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC-CChH---------------------------HH
Q 043626 118 ISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP-ESVA---------------------------QR 169 (291)
Q Consensus 118 is~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~-~~~~---------------------------~~ 169 (291)
+++.+++|+.+. ....++.+++++|+|||.+++.... .+.. ..
T Consensus 111 ~~~~~l~~~~~~---------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (220)
T 3hnr_A 111 VSTYAFHHLTDD---------EKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRI 181 (220)
T ss_dssp EEESCGGGSCHH---------HHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBH
T ss_pred EECcchhcCChH---------HHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCH
Confidence 999999999661 1245999999999999999997522 1111 23
Q ss_pred HHHHHHHHHcCCCC
Q 043626 170 ELILGAAMRAGFAG 183 (291)
Q Consensus 170 ~~i~~~~~~aGF~~ 183 (291)
+.+...+.++||..
T Consensus 182 ~~~~~~l~~aGf~v 195 (220)
T 3hnr_A 182 PVMQTIFENNGFHV 195 (220)
T ss_dssp HHHHHHHHHTTEEE
T ss_pred HHHHHHHHHCCCEE
Confidence 67888999999964
No 33
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.76 E-value=1.2e-18 Score=151.51 Aligned_cols=132 Identities=23% Similarity=0.213 Sum_probs=98.9
Q ss_pred hhhccccccchhHHHHHHHHHHHHHHhCCC-CCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC--
Q 043626 18 TEARKYTSSSRIIDIQAKLSERALELLALP-DDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV-- 94 (291)
Q Consensus 18 ~~a~~Y~~~~~~~~iq~~~~~~~lelL~~~-~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~-- 94 (291)
..+..|+...........+.+.+.+++... .+ +.+|||||||+|.++..+++.+..++|+|+|+.|++.|+++..
T Consensus 5 ~~a~~yd~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~ 82 (246)
T 1y8c_A 5 KFAHIYDKLIRADVDYKKWSDFIIEKCVENNLV--FDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ 82 (246)
T ss_dssp HHHHHHHHHTTCSCCHHHHHHHHHHHHHTTTCC--TTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHccccccHHHHHHHHHHHHHHhCCC--CCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhc
Confidence 455556543221111223444455555332 12 6799999999999999999999999999999999999988754
Q ss_pred --cceEEEccCCCCCCCCCCcccEEEECC-chhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 95 --EGDLLLGDMGQGLGLRPGVVDGAISIS-AVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 95 --~~~~~~~D~~~~~~~~~~~fD~Vis~~-~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
.+.++++|+. .+++. ++||+|++.. +++|+.+ + ..+..++.+++++|+|||.+++.+
T Consensus 83 ~~~~~~~~~d~~-~~~~~-~~fD~v~~~~~~l~~~~~-------~-~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 83 GLKPRLACQDIS-NLNIN-RKFDLITCCLDSTNYIID-------S-DDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp TCCCEEECCCGG-GCCCS-CCEEEEEECTTGGGGCCS-------H-HHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCeEEEecccc-cCCcc-CCceEEEEcCccccccCC-------H-HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 5789999984 45665 8999999998 9999843 1 126789999999999999999854
No 34
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.76 E-value=1.4e-17 Score=142.17 Aligned_cols=131 Identities=20% Similarity=0.210 Sum_probs=103.0
Q ss_pred cCCchhhccccccchhHH--HHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCC-eEEEEeCCHHHHHHHH
Q 043626 14 FYDDTEARKYTSSSRIID--IQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGH-QWIGLDISQSMLNIAL 90 (291)
Q Consensus 14 fy~~~~a~~Y~~~~~~~~--iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~-~v~gvDis~~ml~~a~ 90 (291)
+|+ ..|..|+....... ........++..+.. + +.+|||||||+|.++..+ +. .++|+|+|+.|++.++
T Consensus 2 ~fd-~~a~~y~~~~~~~~~~~~~~~~~~~l~~~~~-~---~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~ 73 (211)
T 2gs9_A 2 PFA-SLAEAYEAWYGTPLGAYVIAEEERALKGLLP-P---GESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGR 73 (211)
T ss_dssp TTT-TTTTTTTGGGGSHHHHHHHHHHHHHHHTTCC-C---CSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHH
T ss_pred chh-hHHHHHHHHhcccchhhhHHHHHHHHHHhcC-C---CCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHH
Confidence 344 56777776432211 112333444544433 3 679999999999999887 66 9999999999999999
Q ss_pred hcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 043626 91 EREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE 164 (291)
Q Consensus 91 ~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~ 164 (291)
++...+.++.+|+ ..+++++++||+|++..+++|+.+ ...++.++.++|+|||.+++.+...
T Consensus 74 ~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~-----------~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 74 RRAPEATWVRAWG-EALPFPGESFDVVLLFTTLEFVED-----------VERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp HHCTTSEEECCCT-TSCCSCSSCEEEEEEESCTTTCSC-----------HHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred HhCCCcEEEEccc-ccCCCCCCcEEEEEEcChhhhcCC-----------HHHHHHHHHHHcCCCCEEEEEecCC
Confidence 9887789999998 457888899999999999999976 6789999999999999999987554
No 35
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.76 E-value=5.7e-18 Score=151.48 Aligned_cols=121 Identities=19% Similarity=0.237 Sum_probs=101.9
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCCCCCCCcccEEEECCchhh
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGLGLRPGVVDGAISISAVQW 125 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~ 125 (291)
+.+|||||||+|.++..+++.+..++|+|+|+.|++.|+++. ..+.++.+|+....++.+++||+|++..+++|
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~ 148 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEW 148 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGGG
T ss_pred CCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhhc
Confidence 569999999999999999999999999999999999999865 34789999985433377899999999999999
Q ss_pred hccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC-------------------------------ChHHHHHHHH
Q 043626 126 LCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE-------------------------------SVAQRELILG 174 (291)
Q Consensus 126 l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~-------------------------------~~~~~~~i~~ 174 (291)
+.+ ...++..++++|+|||.+++.++.. .....+.+..
T Consensus 149 ~~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 217 (285)
T 4htf_A 149 VAD-----------PRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYL 217 (285)
T ss_dssp CSC-----------HHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHH
T ss_pred ccC-----------HHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHH
Confidence 977 6789999999999999999976421 1123467888
Q ss_pred HHHHcCCCC
Q 043626 175 AAMRAGFAG 183 (291)
Q Consensus 175 ~~~~aGF~~ 183 (291)
++.++||..
T Consensus 218 ~l~~aGf~v 226 (285)
T 4htf_A 218 WLEEAGWQI 226 (285)
T ss_dssp HHHHTTCEE
T ss_pred HHHHCCCce
Confidence 888899975
No 36
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.76 E-value=5.7e-18 Score=153.84 Aligned_cols=143 Identities=20% Similarity=0.220 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHhC-CCCCCCCCeEEEEcCCCchhHHHHHHc-CCeEEEEeCCHHHHHHHHhcCC------cceEEEcc
Q 043626 31 DIQAKLSERALELLA-LPDDGVPRLLLDIGCGSGLSGETLSEN-GHQWIGLDISQSMLNIALEREV------EGDLLLGD 102 (291)
Q Consensus 31 ~iq~~~~~~~lelL~-~~~~~~~~~VLDiGcGsG~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~------~~~~~~~D 102 (291)
.++....+.+++.+. +.+ +.+|||||||+|.++..|++. +..|+|+|+|+.|++.|+++.. .+.++++|
T Consensus 99 ~~~~~~~~~l~~~l~~~~~---~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 175 (312)
T 3vc1_A 99 RLESAQAEFLMDHLGQAGP---DDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCN 175 (312)
T ss_dssp HHHHHHHHHHHTTSCCCCT---TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred hHHHHHHHHHHHHhccCCC---CCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECC
Confidence 344555566777776 544 679999999999999999988 8999999999999999988642 47899999
Q ss_pred CCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCCh----------------
Q 043626 103 MGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESV---------------- 166 (291)
Q Consensus 103 ~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~---------------- 166 (291)
+ ..+++..++||+|+++.+++|+ + +..+|..++++|+|||++++.......
T Consensus 176 ~-~~~~~~~~~fD~V~~~~~l~~~-~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (312)
T 3vc1_A 176 M-LDTPFDKGAVTASWNNESTMYV-D-----------LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHF 242 (312)
T ss_dssp T-TSCCCCTTCEEEEEEESCGGGS-C-----------HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHH
T ss_pred h-hcCCCCCCCEeEEEECCchhhC-C-----------HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhh
Confidence 8 4578888999999999999998 4 678999999999999999986532111
Q ss_pred ----HHHHHHHHHHHHcCCCCcEEEeC
Q 043626 167 ----AQRELILGAAMRAGFAGGVVVDY 189 (291)
Q Consensus 167 ----~~~~~i~~~~~~aGF~~~~~~~~ 189 (291)
...+.+..++.++||....+.++
T Consensus 243 ~~~~~s~~~~~~~l~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 243 ECNIHSRREYLRAMADNRLVPHTIVDL 269 (312)
T ss_dssp TCCCCBHHHHHHHHHTTTEEEEEEEEC
T ss_pred cCCCCCHHHHHHHHHHCCCEEEEEEeC
Confidence 13466788899999986444444
No 37
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.75 E-value=1.1e-17 Score=143.61 Aligned_cols=114 Identities=26% Similarity=0.278 Sum_probs=94.9
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcCC----------cceEEEcc
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALEREV----------EGDLLLGD 102 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~~----------~~~~~~~D 102 (291)
...+.+++.+...+ +.+|||||||+|.++..+++.+ ..++|+|+|+.|++.|+++.. .+.++.+|
T Consensus 16 ~~~~~l~~~l~~~~---~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 92 (217)
T 3jwh_A 16 QRMNGVVAALKQSN---ARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGA 92 (217)
T ss_dssp HHHHHHHHHHHHTT---CCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECC
T ss_pred HHHHHHHHHHHhcC---CCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCC
Confidence 44566666665444 6799999999999999999986 699999999999999998753 58899999
Q ss_pred CCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 103 MGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 103 ~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
+ ...++..++||+|+++.+++|+.+ ..+..+++.++++|+|||.+++..
T Consensus 93 ~-~~~~~~~~~fD~v~~~~~l~~~~~---------~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 93 L-TYQDKRFHGYDAATVIEVIEHLDL---------SRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp T-TSCCGGGCSCSEEEEESCGGGCCH---------HHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred c-ccccccCCCcCEEeeHHHHHcCCH---------HHHHHHHHHHHHHcCCCEEEEEcc
Confidence 8 456666789999999999999954 225789999999999999887753
No 38
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.75 E-value=6.2e-18 Score=145.87 Aligned_cols=123 Identities=19% Similarity=0.285 Sum_probs=103.2
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCc----------ceEEEccCCCCCCCCCCcccEEEECC
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVE----------GDLLLGDMGQGLGLRPGVVDGAISIS 121 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~----------~~~~~~D~~~~~~~~~~~fD~Vis~~ 121 (291)
+.+|||||||+|.++..++..+..++|+|+|+.|++.|+++... +.++.+|+ ..+++..++||+|+++.
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~D~v~~~~ 109 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA-SSLSFHDSSFDFAVMQA 109 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT-TSCCSCTTCEEEEEEES
T ss_pred CCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc-cccCCCCCceeEEEEcc
Confidence 67999999999999999999999999999999999999986542 57889998 45778889999999999
Q ss_pred chhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC------------------------------------
Q 043626 122 AVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES------------------------------------ 165 (291)
Q Consensus 122 ~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~------------------------------------ 165 (291)
+++|+.+ +. ....+++.++++|+|||++++..+...
T Consensus 110 ~l~~~~~-------~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (235)
T 3sm3_A 110 FLTSVPD-------PK-ERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFI 181 (235)
T ss_dssp CGGGCCC-------HH-HHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEE
T ss_pred hhhcCCC-------HH-HHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCccee
Confidence 9999976 11 134899999999999999999754221
Q ss_pred --hHHHHHHHHHHHHcCCCC
Q 043626 166 --VAQRELILGAAMRAGFAG 183 (291)
Q Consensus 166 --~~~~~~i~~~~~~aGF~~ 183 (291)
....+.+..++.++||..
T Consensus 182 ~~~~~~~~l~~ll~~aGf~~ 201 (235)
T 3sm3_A 182 AHHFTEKELVFLLTDCRFEI 201 (235)
T ss_dssp EECBCHHHHHHHHHTTTEEE
T ss_pred eEeCCHHHHHHHHHHcCCEE
Confidence 124667889999999986
No 39
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.75 E-value=1.3e-17 Score=145.51 Aligned_cols=127 Identities=17% Similarity=0.080 Sum_probs=103.3
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcCCc-----ceEEEccCCCCCCCCCCcccEEEECCchhh
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALEREVE-----GDLLLGDMGQGLGLRPGVVDGAISISAVQW 125 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~~~-----~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~ 125 (291)
+.+|||||||+|.++..|+..+ ..++|+|+|+.|++.|+++... +.++.+|+ ..+++..++||+|++..+++|
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL-QDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG-GGCCCCSSCEEEEEEESCGGG
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcCh-hhcCCCCCCEEEEEEcchhhh
Confidence 6799999999999999998885 6999999999999999987643 67899997 456777789999999999999
Q ss_pred hccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC------------hHHHHHHHHHHHHcCCCCcEEEe
Q 043626 126 LCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES------------VAQRELILGAAMRAGFAGGVVVD 188 (291)
Q Consensus 126 l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~------------~~~~~~i~~~~~~aGF~~~~~~~ 188 (291)
+.+ ..+..++..++++|+|||++++...... ....+.+..++.++||....+..
T Consensus 159 ~~~---------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 224 (241)
T 2ex4_A 159 LTD---------QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEER 224 (241)
T ss_dssp SCH---------HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEE
T ss_pred CCH---------HHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeee
Confidence 855 2256899999999999999999542110 11467888999999998744433
No 40
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.75 E-value=3.9e-18 Score=140.72 Aligned_cols=130 Identities=15% Similarity=0.127 Sum_probs=104.8
Q ss_pred HHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEE
Q 043626 39 RALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAI 118 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vi 118 (291)
.+++.+.+.+ +.+|||||||+|.++..+++.+..++|+|+|+.+++.++++...+.++.+| .++..++||+|+
T Consensus 8 ~~~~~~~~~~---~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~v~~~~~d----~~~~~~~~D~v~ 80 (170)
T 3i9f_A 8 EYLPNIFEGK---KGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEKFDSVITLSDP----KEIPDNSVDFIL 80 (170)
T ss_dssp TTHHHHHSSC---CEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHHCTTSEEESSG----GGSCTTCEEEEE
T ss_pred HHHHhcCcCC---CCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHhCCCcEEEeCC----CCCCCCceEEEE
Confidence 3455555554 679999999999999999998789999999999999999987788999888 567788999999
Q ss_pred ECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCCh----------HHHHHHHHHHHHcCCCCcEEEe
Q 043626 119 SISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESV----------AQRELILGAAMRAGFAGGVVVD 188 (291)
Q Consensus 119 s~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~----------~~~~~i~~~~~~aGF~~~~~~~ 188 (291)
++.+++|+.+ ...+++++.++|+|||++++..+.... ...+.+..++. ||.......
T Consensus 81 ~~~~l~~~~~-----------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~ 147 (170)
T 3i9f_A 81 FANSFHDMDD-----------KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFN 147 (170)
T ss_dssp EESCSTTCSC-----------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEEC
T ss_pred EccchhcccC-----------HHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccC
Confidence 9999999976 678999999999999999997543211 13455666666 897633333
No 41
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.75 E-value=8.7e-18 Score=145.65 Aligned_cols=133 Identities=25% Similarity=0.329 Sum_probs=100.7
Q ss_pred cCCchhhccccccch-----hHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHH
Q 043626 14 FYDDTEARKYTSSSR-----IIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNI 88 (291)
Q Consensus 14 fy~~~~a~~Y~~~~~-----~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~ 88 (291)
+|++..+..|+.... .......+.+.+.+.+ ++ +.+|||||||+|.++..+++.+..++|+|+|+.|++.
T Consensus 3 ~y~~~~a~~yd~~~~~~~~~~~~~~~~~~~~l~~~~--~~---~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~ 77 (239)
T 3bxo_A 3 MYEVDHADVYDLFYLGRGKDYAAEASDIADLVRSRT--PE---ASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTH 77 (239)
T ss_dssp -CCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHC--TT---CCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHH
T ss_pred cccchhHHHHHHHhhccHhhHHHHHHHHHHHHHHhc--CC---CCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHH
Confidence 455466777766421 1222223333333333 33 6799999999999999999988899999999999999
Q ss_pred HHhcCCcceEEEccCCCCCCCCCCcccEEEEC-CchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 89 ALEREVEGDLLLGDMGQGLGLRPGVVDGAISI-SAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 89 a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~-~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
|+++...+.++.+|+.. +++ +++||+|+|. .+++|+.+ + ..+..++..++++|+|||.+++..
T Consensus 78 a~~~~~~~~~~~~d~~~-~~~-~~~~D~v~~~~~~~~~~~~-------~-~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 78 ARKRLPDATLHQGDMRD-FRL-GRKFSAVVSMFSSVGYLKT-------T-EELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp HHHHCTTCEEEECCTTT-CCC-SSCEEEEEECTTGGGGCCS-------H-HHHHHHHHHHHHTEEEEEEEEECC
T ss_pred HHHhCCCCEEEECCHHH-ccc-CCCCcEEEEcCchHhhcCC-------H-HHHHHHHHHHHHhcCCCeEEEEEe
Confidence 99998889999999844 565 7899999964 58999854 1 226789999999999999999963
No 42
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.75 E-value=3.3e-17 Score=140.74 Aligned_cols=115 Identities=23% Similarity=0.250 Sum_probs=95.0
Q ss_pred HHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcCC----------cceEEEc
Q 043626 34 AKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALEREV----------EGDLLLG 101 (291)
Q Consensus 34 ~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~~----------~~~~~~~ 101 (291)
....+.+++.+...+ +.+|||||||+|.++..+++.+ ..++|+|+|+.|++.|+++.. .+.++.+
T Consensus 15 ~~~~~~l~~~l~~~~---~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 91 (219)
T 3jwg_A 15 QQRLGTVVAVLKSVN---AKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQS 91 (219)
T ss_dssp HHHHHHHHHHHHHTT---CCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEEC
T ss_pred HHHHHHHHHHHhhcC---CCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeC
Confidence 344555666665444 6799999999999999999987 699999999999999998754 5789999
Q ss_pred cCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 102 DMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 102 D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
|+ ...++..++||+|++..+++|+.+ ..+..+++.++++|+|||.+++..
T Consensus 92 d~-~~~~~~~~~fD~V~~~~~l~~~~~---------~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 92 SL-VYRDKRFSGYDAATVIEVIEHLDE---------NRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp CS-SSCCGGGTTCSEEEEESCGGGCCH---------HHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred cc-cccccccCCCCEEEEHHHHHhCCH---------HHHHHHHHHHHHhhCCCEEEEEcc
Confidence 98 556777789999999999999954 125789999999999999777653
No 43
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.75 E-value=8.7e-18 Score=146.03 Aligned_cols=127 Identities=20% Similarity=0.154 Sum_probs=103.7
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCc------ceEEEccCCCCCCCCCCcccEEEECCchhh
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVE------GDLLLGDMGQGLGLRPGVVDGAISISAVQW 125 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~------~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~ 125 (291)
+.+|||||||+|.++..|+..+..|+|+|+|+.|++.|+++... +.++++|+.+ ++ ..++||+|+++.+++|
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFT-WR-PTELFDLIFDYVFFCA 144 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTT-CC-CSSCEEEEEEESSTTT
T ss_pred CCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhc-CC-CCCCeeEEEEChhhhc
Confidence 35999999999999999999899999999999999999987654 7899999855 33 3569999999999999
Q ss_pred hccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCCh--------HHHHHHHHHHHHcCCCCcEEEeC
Q 043626 126 LCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESV--------AQRELILGAAMRAGFAGGVVVDY 189 (291)
Q Consensus 126 l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~--------~~~~~i~~~~~~aGF~~~~~~~~ 189 (291)
++..+ ...++..++++|+|||.+++..++... ...+.+..++.++||....+...
T Consensus 145 ~~~~~---------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 145 IEPEM---------RPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEEN 207 (235)
T ss_dssp SCGGG---------HHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEEC
T ss_pred CCHHH---------HHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEec
Confidence 86211 678999999999999999987664321 24678888999999986333333
No 44
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.74 E-value=3.2e-17 Score=146.63 Aligned_cols=119 Identities=24% Similarity=0.290 Sum_probs=99.7
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHH-HcCCeEEEEeCCHHHHHHHHhcC------CcceEEE
Q 043626 28 RIIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLS-ENGHQWIGLDISQSMLNIALERE------VEGDLLL 100 (291)
Q Consensus 28 ~~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~-~~g~~v~gvDis~~ml~~a~~~~------~~~~~~~ 100 (291)
.+...+..+.+.+++.+.+.+ +.+|||||||+|.++..++ ..+..|+|+|+|+.+++.|+++. ..+.++.
T Consensus 44 ~l~~a~~~~~~~~~~~~~~~~---~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~ 120 (287)
T 1kpg_A 44 TLQEAQIAKIDLALGKLGLQP---GMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLL 120 (287)
T ss_dssp CHHHHHHHHHHHHHTTTTCCT---TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE
T ss_pred CHHHHHHHHHHHHHHHcCCCC---cCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 356677778888888887766 6799999999999999998 45789999999999999998864 2578899
Q ss_pred ccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc
Q 043626 101 GDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 162 (291)
Q Consensus 101 ~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~ 162 (291)
+|+ ..++ ++||+|++..+++|+...+ ...+|.+++++|+|||.+++...
T Consensus 121 ~d~-~~~~---~~fD~v~~~~~l~~~~~~~---------~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 121 AGW-EQFD---EPVDRIVSIGAFEHFGHER---------YDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp SCG-GGCC---CCCSEEEEESCGGGTCTTT---------HHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCh-hhCC---CCeeEEEEeCchhhcChHH---------HHHHHHHHHHhcCCCCEEEEEEe
Confidence 998 3344 8999999999999994321 67899999999999999999753
No 45
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.74 E-value=2.6e-17 Score=148.64 Aligned_cols=125 Identities=21% Similarity=0.275 Sum_probs=103.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc-CCeEEEEeCCHHHHHHHHhcCC------cceEEEc
Q 043626 29 IIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN-GHQWIGLDISQSMLNIALEREV------EGDLLLG 101 (291)
Q Consensus 29 ~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~------~~~~~~~ 101 (291)
+...+....+.+++.+.+.+ +.+|||||||+|.++..+++. +..|+|+|+|+.|++.|+++.. .+.++.+
T Consensus 53 l~~a~~~~~~~~~~~~~~~~---~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 129 (302)
T 3hem_A 53 LEEAQYAKRKLALDKLNLEP---GMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ 129 (302)
T ss_dssp HHHHHHHHHHHHHHTTCCCT---TCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCC---cCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC
Confidence 55667778888899887776 779999999999999999988 8999999999999999988743 3789999
Q ss_pred cCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc
Q 043626 102 DMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 162 (291)
Q Consensus 102 D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~ 162 (291)
|+.+ + +++||+|+++.+++|++++.. ..+...+..+|.++.++|+|||++++...
T Consensus 130 d~~~-~---~~~fD~v~~~~~~~~~~d~~~--~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 130 GWEE-F---DEPVDRIVSLGAFEHFADGAG--DAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp CGGG-C---CCCCSEEEEESCGGGTTCCSS--CCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred CHHH-c---CCCccEEEEcchHHhcCcccc--ccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 9843 3 789999999999999976321 00223367999999999999999999754
No 46
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.74 E-value=1.2e-17 Score=156.27 Aligned_cols=122 Identities=25% Similarity=0.252 Sum_probs=102.0
Q ss_pred CCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcC-------------CcceEEEccCCCC--C---CCC
Q 043626 52 PRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALERE-------------VEGDLLLGDMGQG--L---GLR 110 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~-------------~~~~~~~~D~~~~--~---~~~ 110 (291)
+.+|||||||+|.++..|++. +..|+|+|+|+.|++.|+++. .++.++.+|+... + +++
T Consensus 84 ~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~ 163 (383)
T 4fsd_A 84 GATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVP 163 (383)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCC
T ss_pred CCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCC
Confidence 679999999999999999875 469999999999999999873 4689999998542 1 788
Q ss_pred CCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC-CC-------------------hHHHH
Q 043626 111 PGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP-ES-------------------VAQRE 170 (291)
Q Consensus 111 ~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~-~~-------------------~~~~~ 170 (291)
+++||+|+++.+++|+.+ ...+|.+++++|+|||++++.... .. ....+
T Consensus 164 ~~~fD~V~~~~~l~~~~d-----------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (383)
T 4fsd_A 164 DSSVDIVISNCVCNLSTN-----------KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLE 232 (383)
T ss_dssp TTCEEEEEEESCGGGCSC-----------HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHH
T ss_pred CCCEEEEEEccchhcCCC-----------HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHH
Confidence 899999999999999977 679999999999999999996422 11 01237
Q ss_pred HHHHHHHHcCCCCc
Q 043626 171 LILGAAMRAGFAGG 184 (291)
Q Consensus 171 ~i~~~~~~aGF~~~ 184 (291)
.+..++.++||...
T Consensus 233 ~~~~ll~~aGF~~v 246 (383)
T 4fsd_A 233 DFRRLVAEAGFRDV 246 (383)
T ss_dssp HHHHHHHHTTCCCE
T ss_pred HHHHHHHHCCCceE
Confidence 78899999999863
No 47
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.74 E-value=5.9e-18 Score=145.10 Aligned_cols=137 Identities=19% Similarity=0.203 Sum_probs=106.3
Q ss_pred HHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC--CCCCC-C
Q 043626 36 LSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG--LGLRP-G 112 (291)
Q Consensus 36 ~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~--~~~~~-~ 112 (291)
....+++.+.... +.+|||||||+|.++..+++.+..++|+|+|+.|++.|+++ ..+.+...|+... .++.. +
T Consensus 40 ~~~~~~~~~~~~~---~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~ 115 (227)
T 3e8s_A 40 TDQAILLAILGRQ---PERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA-GAGEVHLASYAQLAEAKVPVGK 115 (227)
T ss_dssp HHHHHHHHHHHTC---CSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT-CSSCEEECCHHHHHTTCSCCCC
T ss_pred ccHHHHHHhhcCC---CCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh-cccccchhhHHhhcccccccCC
Confidence 3345566655544 67999999999999999999999999999999999999988 5677888776432 14444 4
Q ss_pred cccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC---------------------------
Q 043626 113 VVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES--------------------------- 165 (291)
Q Consensus 113 ~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~--------------------------- 165 (291)
+||+|+++.+++ ..+ ...++..++++|+|||++++......
T Consensus 116 ~fD~v~~~~~l~-~~~-----------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (227)
T 3e8s_A 116 DYDLICANFALL-HQD-----------IIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMP 183 (227)
T ss_dssp CEEEEEEESCCC-SSC-----------CHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEE
T ss_pred CccEEEECchhh-hhh-----------HHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccce
Confidence 599999999998 444 56899999999999999999764110
Q ss_pred --hHHHHHHHHHHHHcCCCCcEEEe
Q 043626 166 --VAQRELILGAAMRAGFAGGVVVD 188 (291)
Q Consensus 166 --~~~~~~i~~~~~~aGF~~~~~~~ 188 (291)
....+.+..++.++||....+..
T Consensus 184 ~~~~~~~~~~~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 184 WYFRTLASWLNALDMAGLRLVSLQE 208 (227)
T ss_dssp EEECCHHHHHHHHHHTTEEEEEEEC
T ss_pred EEEecHHHHHHHHHHcCCeEEEEec
Confidence 11567899999999998733333
No 48
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.74 E-value=1.4e-17 Score=147.46 Aligned_cols=99 Identities=14% Similarity=0.141 Sum_probs=84.9
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC----------------------CcceEEEccCCCCCCC
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE----------------------VEGDLLLGDMGQGLGL 109 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~----------------------~~~~~~~~D~~~~~~~ 109 (291)
+.+|||+|||+|..+..|++.|..|+|||+|+.|++.|+++. ..+.++++|+.+ +++
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~-l~~ 147 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD-LPR 147 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT-GGG
T ss_pred CCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc-CCc
Confidence 679999999999999999999999999999999999997643 357899999944 565
Q ss_pred CC-CcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 110 RP-GVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 110 ~~-~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
.. ++||+|++..+++|++..+ ...+++.++++|+|||++++.
T Consensus 148 ~~~~~FD~V~~~~~l~~l~~~~---------~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 148 ANIGKFDRIWDRGALVAINPGD---------HDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp GCCCCEEEEEESSSTTTSCGGG---------HHHHHHHHHHTEEEEEEEEEE
T ss_pred ccCCCEEEEEEhhhhhhCCHHH---------HHHHHHHHHHHcCCCeEEEEE
Confidence 43 8999999999999985422 467999999999999999754
No 49
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.74 E-value=1.5e-17 Score=147.66 Aligned_cols=130 Identities=17% Similarity=0.143 Sum_probs=99.6
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcCC----------------------------------cc
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALEREV----------------------------------EG 96 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~~----------------------------------~~ 96 (291)
+.+|||||||+|..+..++..+ ..|+|+|+|+.|++.|+++.. .+
T Consensus 56 g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i 135 (263)
T 2a14_A 56 GDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAV 135 (263)
T ss_dssp EEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHE
T ss_pred CceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhh
Confidence 6799999999999888877777 579999999999999886421 02
Q ss_pred -eEEEccCCCCCCCC---CCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC-------
Q 043626 97 -DLLLGDMGQGLGLR---PGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES------- 165 (291)
Q Consensus 97 -~~~~~D~~~~~~~~---~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~------- 165 (291)
.++.+|+....|+. .++||+|+++.++||++. ....+..++.+++++|||||.|++......
T Consensus 136 ~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~-------~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~ 208 (263)
T 2a14_A 136 KRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACC-------SLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGK 208 (263)
T ss_dssp EEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCS-------SHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETT
T ss_pred heEEeccccCCCCCCccccCCCCEeeehHHHHHhcC-------CHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCC
Confidence 28899997654543 579999999999999743 112367899999999999999999752211
Q ss_pred ------hHHHHHHHHHHHHcCCCCcEEEe
Q 043626 166 ------VAQRELILGAAMRAGFAGGVVVD 188 (291)
Q Consensus 166 ------~~~~~~i~~~~~~aGF~~~~~~~ 188 (291)
....+.+...+.++||....+..
T Consensus 209 ~~~~~~~~~~~~l~~~l~~aGF~i~~~~~ 237 (263)
T 2a14_A 209 REFSCVALEKGEVEQAVLDAGFDIEQLLH 237 (263)
T ss_dssp EEEECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred eEeeccccCHHHHHHHHHHCCCEEEEEee
Confidence 12466889999999998633333
No 50
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.73 E-value=1e-16 Score=145.60 Aligned_cols=119 Identities=24% Similarity=0.303 Sum_probs=99.7
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc-CCeEEEEeCCHHHHHHHHhcCC------cceEEE
Q 043626 28 RIIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN-GHQWIGLDISQSMLNIALEREV------EGDLLL 100 (291)
Q Consensus 28 ~~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~------~~~~~~ 100 (291)
.+...+..+.+.+++.+.+.+ +.+|||||||+|.++..+++. +..|+|+|+|+.|++.|+++.. .+.++.
T Consensus 70 ~l~~~~~~~~~~~~~~~~~~~---~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 146 (318)
T 2fk8_A 70 TLEEAQYAKVDLNLDKLDLKP---GMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLL 146 (318)
T ss_dssp CHHHHHHHHHHHHHTTSCCCT---TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE
T ss_pred CHHHHHHHHHHHHHHhcCCCC---cCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 355667778888888887765 679999999999999999987 8999999999999999988642 378899
Q ss_pred ccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc
Q 043626 101 GDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 162 (291)
Q Consensus 101 ~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~ 162 (291)
+|+. .++ ++||+|++..+++|+...+ +..++.++.++|+|||++++...
T Consensus 147 ~d~~-~~~---~~fD~v~~~~~l~~~~~~~---------~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 147 QGWE-DFA---EPVDRIVSIEAFEHFGHEN---------YDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp SCGG-GCC---CCCSEEEEESCGGGTCGGG---------HHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CChH-HCC---CCcCEEEEeChHHhcCHHH---------HHHHHHHHHHhcCCCcEEEEEEe
Confidence 9983 343 7899999999999994311 67899999999999999999754
No 51
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.73 E-value=4.5e-17 Score=136.28 Aligned_cols=127 Identities=17% Similarity=0.162 Sum_probs=87.8
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCCCCCCcccEEEECCchhhh
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLGLRPGVVDGAISISAVQWL 126 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l 126 (291)
+.+|||||||+|.++..|++.+.+|+|+|+|+.|++.|+++. ..+.+++.|+.....+.+++||+|+++. .++
T Consensus 23 ~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~--~~~ 100 (185)
T 3mti_A 23 ESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNL--GYL 100 (185)
T ss_dssp TCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEE--C--
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeC--CCC
Confidence 679999999999999999999999999999999999998875 3478888766332224478999999872 333
Q ss_pred ccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC---hHHHHHHHHHHHHcC
Q 043626 127 CNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES---VAQRELILGAAMRAG 180 (291)
Q Consensus 127 ~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~---~~~~~~i~~~~~~aG 180 (291)
+..+............++..++++|+|||++++..++.. ......+..++....
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~ 157 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLD 157 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSC
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCC
Confidence 332222222233356889999999999999999887643 234445555555443
No 52
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.73 E-value=2.3e-17 Score=145.21 Aligned_cols=131 Identities=18% Similarity=0.075 Sum_probs=102.9
Q ss_pred CCeEEEEcCCCchhHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCc----------------------------------c
Q 043626 52 PRLLLDIGCGSGLSGETLSENGH-QWIGLDISQSMLNIALEREVE----------------------------------G 96 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~-~v~gvDis~~ml~~a~~~~~~----------------------------------~ 96 (291)
+.+|||||||+|.++..++..+. .|+|+|+|+.|++.|+++... +
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v 136 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAI 136 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHE
T ss_pred CCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhh
Confidence 57999999999999999998886 999999999999999876532 5
Q ss_pred -eEEEccCCCCCCCCC---CcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC--------
Q 043626 97 -DLLLGDMGQGLGLRP---GVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE-------- 164 (291)
Q Consensus 97 -~~~~~D~~~~~~~~~---~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~-------- 164 (291)
.++.+|+.+..++.+ ++||+|+++.+++|++.. ...+..++.+++++|+|||.+++.....
T Consensus 137 ~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~-------~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~ 209 (265)
T 2i62_A 137 KQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPD-------LPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGE 209 (265)
T ss_dssp EEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSS-------HHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETT
T ss_pred eeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCC-------hHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCC
Confidence 789999866444455 899999999999966431 1226789999999999999999865221
Q ss_pred -----ChHHHHHHHHHHHHcCCCCcEEEeC
Q 043626 165 -----SVAQRELILGAAMRAGFAGGVVVDY 189 (291)
Q Consensus 165 -----~~~~~~~i~~~~~~aGF~~~~~~~~ 189 (291)
.....+.+..++.++||....+...
T Consensus 210 ~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 239 (265)
T 2i62_A 210 QKFSSLPLGWETVRDAVEEAGYTIEQFEVI 239 (265)
T ss_dssp EEEECCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred ccccccccCHHHHHHHHHHCCCEEEEEEEe
Confidence 1124568889999999986333333
No 53
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.72 E-value=2.6e-17 Score=146.28 Aligned_cols=98 Identities=21% Similarity=0.262 Sum_probs=88.0
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCCCCCCcccEEEECCchh
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLGLRPGVVDGAISISAVQ 124 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~ 124 (291)
+.+|||||||+|.++..+++. +..++|+|+|+.|++.|+++. .++.++.+|+ ..+++.+++||+|++..+++
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~ 116 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANI-FSLPFEDSSFDHIFVCFVLE 116 (276)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCG-GGCCSCTTCEEEEEEESCGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEccc-ccCCCCCCCeeEEEEechhh
Confidence 779999999999999999988 589999999999999998864 3578999998 45778889999999999999
Q ss_pred hhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 125 WLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 125 ~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
|+.+ ...++..++++|+|||.+++..
T Consensus 117 ~~~~-----------~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 117 HLQS-----------PEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp GCSC-----------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcCC-----------HHHHHHHHHHHcCCCcEEEEEE
Confidence 9977 6689999999999999999864
No 54
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.72 E-value=9.8e-17 Score=142.74 Aligned_cols=132 Identities=12% Similarity=0.000 Sum_probs=98.1
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC-C--C-CC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG-L--G-LR 110 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~-~--~-~~ 110 (291)
...+.+++.+.+.+ +.+|||||||+|.++..|++.|..|+|+|+|+.|++.|+++.... ++..++... . + ..
T Consensus 32 ~~~~~il~~l~l~~---g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~~~~~~ 107 (261)
T 3iv6_A 32 SDRENDIFLENIVP---GSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADR-CVTIDLLDITAEIPKEL 107 (261)
T ss_dssp CHHHHHHHTTTCCT---TCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSS-CCEEEECCTTSCCCGGG
T ss_pred HHHHHHHHhcCCCC---cCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhc-cceeeeeeccccccccc
Confidence 45667788887776 789999999999999999999999999999999999999887542 233333211 1 1 12
Q ss_pred CCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcC
Q 043626 111 PGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAG 180 (291)
Q Consensus 111 ~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aG 180 (291)
.++||+|+++.+++|+.. .....++..++++| |||++++++.......-..+.......|
T Consensus 108 ~~~fD~Vv~~~~l~~~~~---------~~~~~~l~~l~~lL-PGG~l~lS~~~g~~~~d~~~l~~~~~~g 167 (261)
T 3iv6_A 108 AGHFDFVLNDRLINRFTT---------EEARRACLGMLSLV-GSGTVRASVKLGFYDIDLKLIEYGEQSG 167 (261)
T ss_dssp TTCCSEEEEESCGGGSCH---------HHHHHHHHHHHHHH-TTSEEEEEEEBSCCHHHHHHHHHHHTTT
T ss_pred CCCccEEEEhhhhHhCCH---------HHHHHHHHHHHHhC-cCcEEEEEeccCcccccHHHHHHHHhcC
Confidence 578999999999998743 23678999999999 9999999876543333333333334444
No 55
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.71 E-value=2e-17 Score=148.50 Aligned_cols=146 Identities=16% Similarity=0.060 Sum_probs=102.4
Q ss_pred HHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCc-------------------
Q 043626 36 LSERALELLALPDDGVPRLLLDIGCGSGLSGETLSE-NGHQWIGLDISQSMLNIALEREVE------------------- 95 (291)
Q Consensus 36 ~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~------------------- 95 (291)
....+++.+..... .+.+|||||||+|.....++. .+..|+|+|+|+.|++.|+++...
T Consensus 57 ~~~~l~~~l~~~~~-~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~ 135 (289)
T 2g72_A 57 KLRCLAQTFATGEV-SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEG 135 (289)
T ss_dssp HHHHHHHHHHTSCS-CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCCCC-CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcC
Confidence 34455555533210 167999999999995554444 368999999999999998874321
Q ss_pred ----------------ceEEEccCCCCCCC-----CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCC
Q 043626 96 ----------------GDLLLGDMGQGLGL-----RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARG 154 (291)
Q Consensus 96 ----------------~~~~~~D~~~~~~~-----~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~Lkpg 154 (291)
+.++.+|+...+|+ ++++||+|+|+.+++|++.. ...+..+|.+++++||||
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~-------~~~~~~~l~~~~r~LkpG 208 (289)
T 2g72_A 136 KGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPD-------LASFQRALDHITTLLRPG 208 (289)
T ss_dssp SCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSS-------HHHHHHHHHHHHTTEEEE
T ss_pred cccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCC-------HHHHHHHHHHHHHhcCCC
Confidence 24667788654553 35679999999999996431 112778999999999999
Q ss_pred cEEEEEEc-------------CCChHHHHHHHHHHHHcCCCCcEEEeC
Q 043626 155 ARAVFQIY-------------PESVAQRELILGAAMRAGFAGGVVVDY 189 (291)
Q Consensus 155 G~lv~~~~-------------~~~~~~~~~i~~~~~~aGF~~~~~~~~ 189 (291)
|+|++... +......+.+..++.++||....+..+
T Consensus 209 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 256 (289)
T 2g72_A 209 GHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLRTY 256 (289)
T ss_dssp EEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred CEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEeeEe
Confidence 99998521 111235678889999999986333333
No 56
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.71 E-value=6.6e-17 Score=138.42 Aligned_cols=114 Identities=18% Similarity=0.215 Sum_probs=93.7
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC---cceEEEccCCCCCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV---EGDLLLGDMGQGLGLRP 111 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~---~~~~~~~D~~~~~~~~~ 111 (291)
.+...+...+...+ +.+|||||||+|.++..|++.+..++|+|+|+.|++.|+++.. .+.++++|+.+ ++ .+
T Consensus 38 ~~~~~l~~~~~~~~---~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~~-~~ 112 (216)
T 3ofk_A 38 RHTQLLRLSLSSGA---VSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQ-FS-TA 112 (216)
T ss_dssp HHHHHHHHHTTTSS---EEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTT-CC-CS
T ss_pred HHHHHHHHHcccCC---CCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhh-CC-CC
Confidence 33333444444443 6799999999999999999999999999999999999998764 47899999854 44 57
Q ss_pred CcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 112 GVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 112 ~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
++||+|+++.+++|+.+ | ..+..++..++++|+|||.+++.+
T Consensus 113 ~~fD~v~~~~~l~~~~~-------~-~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYLED-------M-TQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp CCEEEEEEESCGGGSSS-------H-HHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCccEEEEccHHHhCCC-------H-HHHHHHHHHHHHHcCCCCEEEEEe
Confidence 89999999999999965 2 225688999999999999999975
No 57
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.71 E-value=6.5e-18 Score=151.42 Aligned_cols=145 Identities=19% Similarity=0.224 Sum_probs=103.3
Q ss_pred CCcccCCchhhccccccch-hHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHH
Q 043626 10 PPEIFYDDTEARKYTSSSR-IIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNI 88 (291)
Q Consensus 10 ppe~fy~~~~a~~Y~~~~~-~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~ 88 (291)
-|+.|++...+..|+.... .......+.+.+++++...+ +.+|||||||+|.++..|++.+..|+|+|+|+.|++.
T Consensus 18 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~ 94 (293)
T 3thr_A 18 IPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHG---CHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKY 94 (293)
T ss_dssp SCCTTTTCHHHHHHHHHHTCCSCBCHHHHHHHHHHHHHTT---CCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred ChhhhcCchHHHHHHHHHhcCcchHHHHHHHHHHHhcccC---CCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHH
Confidence 3455665555545542110 00011233344555554444 6799999999999999999999999999999999999
Q ss_pred HHhcC---------CcceEEEccCCCCCC---CCCCcccEEEEC-CchhhhccccccCCchHHHHHHHHHHHHHhccCCc
Q 043626 89 ALERE---------VEGDLLLGDMGQGLG---LRPGVVDGAISI-SAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGA 155 (291)
Q Consensus 89 a~~~~---------~~~~~~~~D~~~~~~---~~~~~fD~Vis~-~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG 155 (291)
|+++. ..+.+..+|+ ..++ +..++||+|+|. .+++|+.+.. ........++++++++|+|||
T Consensus 95 a~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~----~~~~~~~~~l~~~~~~LkpgG 169 (293)
T 3thr_A 95 ALKERWNRRKEPAFDKWVIEEANW-LTLDKDVPAGDGFDAVICLGNSFAHLPDSK----GDQSEHRLALKNIASMVRPGG 169 (293)
T ss_dssp HHHHHHHTTTSHHHHTCEEEECCG-GGHHHHSCCTTCEEEEEECTTCGGGSCCSS----SSSHHHHHHHHHHHHTEEEEE
T ss_pred HHHhhhhcccccccceeeEeecCh-hhCccccccCCCeEEEEEcChHHhhcCccc----cCHHHHHHHHHHHHHHcCCCe
Confidence 98753 2357788887 3345 678899999998 8999996511 011236789999999999999
Q ss_pred EEEEEEc
Q 043626 156 RAVFQIY 162 (291)
Q Consensus 156 ~lv~~~~ 162 (291)
++++.+.
T Consensus 170 ~l~~~~~ 176 (293)
T 3thr_A 170 LLVIDHR 176 (293)
T ss_dssp EEEEEEE
T ss_pred EEEEEeC
Confidence 9999874
No 58
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.71 E-value=1.2e-16 Score=143.15 Aligned_cols=111 Identities=20% Similarity=0.302 Sum_probs=92.4
Q ss_pred HHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcCC----cceEEEccCCCCCC
Q 043626 36 LSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALEREV----EGDLLLGDMGQGLG 108 (291)
Q Consensus 36 ~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~~----~~~~~~~D~~~~~~ 108 (291)
+...+++.+....+ +.+|||||||+|.++..+++. +..++|+|+|+.|++.|+++.. ++.++++|+. .++
T Consensus 9 ~~~~~~~~~~~~~~--~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~ 85 (284)
T 3gu3_A 9 YVSFLVNTVWKITK--PVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDAT-EIE 85 (284)
T ss_dssp HHHHHHHTTSCCCS--CCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTT-TCC
T ss_pred HHHHHHHHHhccCC--CCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchh-hcC
Confidence 34455555533222 789999999999999999987 5799999999999999988643 5789999995 466
Q ss_pred CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 109 LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 109 ~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
+ +++||+|++..+++|+.+ ...++.+++++|+|||.+++..
T Consensus 86 ~-~~~fD~v~~~~~l~~~~~-----------~~~~l~~~~~~LkpgG~l~~~~ 126 (284)
T 3gu3_A 86 L-NDKYDIAICHAFLLHMTT-----------PETMLQKMIHSVKKGGKIICFE 126 (284)
T ss_dssp C-SSCEEEEEEESCGGGCSS-----------HHHHHHHHHHTEEEEEEEEEEE
T ss_pred c-CCCeeEEEECChhhcCCC-----------HHHHHHHHHHHcCCCCEEEEEe
Confidence 6 579999999999999977 6799999999999999999865
No 59
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.70 E-value=1.7e-16 Score=138.86 Aligned_cols=137 Identities=9% Similarity=0.012 Sum_probs=103.1
Q ss_pred CCeEEEEcCCCchhHHHHHH--cCCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCCCC---CCcccEEEECC
Q 043626 52 PRLLLDIGCGSGLSGETLSE--NGHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLGLR---PGVVDGAISIS 121 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~--~g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~~~---~~~fD~Vis~~ 121 (291)
+.+|||||||+|..+..|+. .+.+|+|+|+|+.|++.|+++. .++.++++|+.+ +++. .++||+|+|..
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAET-FGQRKDVRESYDIVTARA 149 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHH-HTTCTTTTTCEEEEEEEC
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHH-hcccccccCCccEEEEec
Confidence 67999999999999999985 3589999999999999998753 358899998843 4443 57999999865
Q ss_pred chhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeCCCCCCCCcEEEE
Q 043626 122 AVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFLV 201 (291)
Q Consensus 122 ~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~p~~~~~~~~~l~ 201 (291)
+ .+ +..++..++++|+|||.+++...+........+...+..+||....+..+.........+++
T Consensus 150 ~----~~-----------~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~ 214 (240)
T 1xdz_A 150 V----AR-----------LSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIM 214 (240)
T ss_dssp C----SC-----------HHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEE
T ss_pred c----CC-----------HHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEE
Confidence 2 22 67899999999999999999876666677788888999999976333333222223334444
Q ss_pred Eee
Q 043626 202 LTC 204 (291)
Q Consensus 202 l~~ 204 (291)
++.
T Consensus 215 ~~~ 217 (240)
T 1xdz_A 215 VIR 217 (240)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 60
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.70 E-value=8.6e-16 Score=130.65 Aligned_cols=128 Identities=16% Similarity=0.118 Sum_probs=105.5
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGL 107 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~ 107 (291)
.+...+++.+.+.+ +.+|||||||+|.++..++..+ ..++|+|+|+.+++.|+++. ..+.++.+|+.+.+
T Consensus 27 ~i~~~~l~~l~~~~---~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 103 (204)
T 3e05_A 27 EVRAVTLSKLRLQD---DLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGL 103 (204)
T ss_dssp HHHHHHHHHTTCCT---TCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTC
T ss_pred HHHHHHHHHcCCCC---CCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhh
Confidence 45566777877766 7899999999999999999987 89999999999999998864 35789999985544
Q ss_pred CCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCC
Q 043626 108 GLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFA 182 (291)
Q Consensus 108 ~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~ 182 (291)
+ ..++||+|++..+++ + +..++..+.++|+|||++++.... ......+...+.++||.
T Consensus 104 ~-~~~~~D~i~~~~~~~---~-----------~~~~l~~~~~~LkpgG~l~~~~~~--~~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 104 D-DLPDPDRVFIGGSGG---M-----------LEEIIDAVDRRLKSEGVIVLNAVT--LDTLTKAVEFLEDHGYM 161 (204)
T ss_dssp T-TSCCCSEEEESCCTT---C-----------HHHHHHHHHHHCCTTCEEEEEECB--HHHHHHHHHHHHHTTCE
T ss_pred h-cCCCCCEEEECCCCc---C-----------HHHHHHHHHHhcCCCeEEEEEecc--cccHHHHHHHHHHCCCc
Confidence 3 236899999987765 2 568999999999999999998643 35677888899999993
No 61
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.70 E-value=3e-17 Score=148.08 Aligned_cols=131 Identities=22% Similarity=0.298 Sum_probs=99.2
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCC-----------------------------------
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALEREV----------------------------------- 94 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~----------------------------------- 94 (291)
+.+|||||||+|.++..|+.. +..|+|+|+|+.|++.|+++..
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCF 126 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC------------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccccc
Confidence 679999999999999999987 5899999999999999988642
Q ss_pred ----------------------------cceEEEccCCCCC----CCCCCcccEEEECCchhhhccccccCCchHHHHHH
Q 043626 95 ----------------------------EGDLLLGDMGQGL----GLRPGVVDGAISISAVQWLCNADKASHEPRLRLKA 142 (291)
Q Consensus 95 ----------------------------~~~~~~~D~~~~~----~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~ 142 (291)
.+.++++|+.... ++..++||+|+|.++++|+.- ..+...+..
T Consensus 127 p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl-----~~~~~~~~~ 201 (292)
T 3g07_A 127 PASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHL-----NWGDEGLKR 201 (292)
T ss_dssp ---------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHH-----HHHHHHHHH
T ss_pred cchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhh-----cCCHHHHHH
Confidence 4788889885432 356789999999999988730 002233789
Q ss_pred HHHHHHHhccCCcEEEEEEcCCCh---------H----------HHHHHHHHHHH--cCCCCcEEE
Q 043626 143 FFGSLYRCLARGARAVFQIYPESV---------A----------QRELILGAAMR--AGFAGGVVV 187 (291)
Q Consensus 143 ~l~~l~~~LkpgG~lv~~~~~~~~---------~----------~~~~i~~~~~~--aGF~~~~~~ 187 (291)
+|+.++++|+|||+|++...+... . ..+.+..++.. +||....++
T Consensus 202 ~l~~~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~ 267 (292)
T 3g07_A 202 MFRRIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELV 267 (292)
T ss_dssp HHHHHHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC
T ss_pred HHHHHHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEe
Confidence 999999999999999996432110 0 12356667777 899763333
No 62
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.70 E-value=1.7e-16 Score=136.12 Aligned_cols=129 Identities=20% Similarity=0.264 Sum_probs=104.8
Q ss_pred HHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCC-CCCCCCCcccE
Q 043626 38 ERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQ-GLGLRPGVVDG 116 (291)
Q Consensus 38 ~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~-~~~~~~~~fD~ 116 (291)
..+++++. .+ +.+|||||||+|.++..+++.+..++|+|+|+.+++.++++.. .++.+|+.. ..++.+++||+
T Consensus 23 ~~l~~~~~-~~---~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~ 96 (230)
T 3cc8_A 23 PNLLKHIK-KE---WKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKLD--HVVLGDIETMDMPYEEEQFDC 96 (230)
T ss_dssp HHHHTTCC-TT---CSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTSS--EEEESCTTTCCCCSCTTCEEE
T ss_pred HHHHHHhc-cC---CCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCC--cEEEcchhhcCCCCCCCccCE
Confidence 44555554 23 6799999999999999999889999999999999999998764 688899854 25677889999
Q ss_pred EEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC---------------------------ChHHH
Q 043626 117 AISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE---------------------------SVAQR 169 (291)
Q Consensus 117 Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~---------------------------~~~~~ 169 (291)
|++..+++|+.+ ...++..+.++|+|||.+++.+... .....
T Consensus 97 v~~~~~l~~~~~-----------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (230)
T 3cc8_A 97 VIFGDVLEHLFD-----------PWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTF 165 (230)
T ss_dssp EEEESCGGGSSC-----------HHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCH
T ss_pred EEECChhhhcCC-----------HHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecH
Confidence 999999999976 5689999999999999999975321 11235
Q ss_pred HHHHHHHHHcCCCC
Q 043626 170 ELILGAAMRAGFAG 183 (291)
Q Consensus 170 ~~i~~~~~~aGF~~ 183 (291)
+.+..++.++||..
T Consensus 166 ~~~~~~l~~~Gf~~ 179 (230)
T 3cc8_A 166 NEMLRMFLKAGYSI 179 (230)
T ss_dssp HHHHHHHHHTTEEE
T ss_pred HHHHHHHHHcCCeE
Confidence 67778888888875
No 63
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.69 E-value=3.4e-16 Score=138.33 Aligned_cols=128 Identities=23% Similarity=0.301 Sum_probs=98.7
Q ss_pred hhhccccccchhHH---HHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC
Q 043626 18 TEARKYTSSSRIID---IQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV 94 (291)
Q Consensus 18 ~~a~~Y~~~~~~~~---iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~ 94 (291)
..+..|+....... ....+.+.+.+++. + +.+|||||||+|.++..+++.+..++|+|+|+.|++.|+++..
T Consensus 23 ~~a~~Yd~~~~~~~~~~~~~~~~~~l~~~~~--~---~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~ 97 (260)
T 2avn_A 23 RIARAYDSMYETPKWKLYHRLIGSFLEEYLK--N---PCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGV 97 (260)
T ss_dssp HHHHHHGGGGCSHHHHHHHHHHHHHHHHHCC--S---CCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTC
T ss_pred HHHHHHHHhccccchhHHHHHHHHHHHHhcC--C---CCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcC
Confidence 56677766542222 12222333333332 3 6799999999999999999999999999999999999998876
Q ss_pred cceEEEccCCCCCCCCCCcccEEEECCchhhh-ccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC
Q 043626 95 EGDLLLGDMGQGLGLRPGVVDGAISISAVQWL-CNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP 163 (291)
Q Consensus 95 ~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l-~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~ 163 (291)
. .++.+|+ ..+++++++||+|++..++.|+ .+ ...++.+++++|+|||.+++.+..
T Consensus 98 ~-~~~~~d~-~~~~~~~~~fD~v~~~~~~~~~~~~-----------~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 98 K-NVVEAKA-EDLPFPSGAFEAVLALGDVLSYVEN-----------KDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp S-CEEECCT-TSCCSCTTCEEEEEECSSHHHHCSC-----------HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred C-CEEECcH-HHCCCCCCCEEEEEEcchhhhcccc-----------HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 3 4888998 4577888999999998877666 44 678999999999999999998753
No 64
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.69 E-value=1.9e-16 Score=142.78 Aligned_cols=109 Identities=19% Similarity=0.323 Sum_probs=91.8
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHH---cCCeEEEEeCCHHHHHHHHhc-------CCcceEEEccCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSE---NGHQWIGLDISQSMLNIALER-------EVEGDLLLGDMG 104 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~---~g~~v~gvDis~~ml~~a~~~-------~~~~~~~~~D~~ 104 (291)
.+.+.+..++. .+ +.+|||||||+|..+..|++ .+..|+|+|+|+.|++.|+++ ...+.++++|+
T Consensus 24 ~~~~~l~~~~~-~~---~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~- 98 (299)
T 3g5t_A 24 DFYKMIDEYHD-GE---RKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSS- 98 (299)
T ss_dssp HHHHHHHHHCC-SC---CSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCT-
T ss_pred HHHHHHHHHhc-CC---CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCH-
Confidence 44455555543 23 67999999999999999994 568999999999999999886 45689999998
Q ss_pred CCCCCCC------CcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 105 QGLGLRP------GVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 105 ~~~~~~~------~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
..+++.. ++||+|+++.+++|+ + +..++..+.++|+|||.+++.
T Consensus 99 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~-----------~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 99 DDFKFLGADSVDKQKIDMITAVECAHWF-D-----------FEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp TCCGGGCTTTTTSSCEEEEEEESCGGGS-C-----------HHHHHHHHHHHEEEEEEEEEE
T ss_pred HhCCccccccccCCCeeEEeHhhHHHHh-C-----------HHHHHHHHHHhcCCCcEEEEE
Confidence 4466666 899999999999999 6 789999999999999999984
No 65
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.69 E-value=1.9e-16 Score=133.18 Aligned_cols=109 Identities=19% Similarity=0.266 Sum_probs=91.1
Q ss_pred HHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCCCCCCc
Q 043626 39 RALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLGLRPGV 113 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~~~~~~ 113 (291)
.+++.+...+ +.+|||||||+|.++..+++.+..++|+|+|+.+++.++++. ..+.++.+|+. .+++ +++
T Consensus 23 ~l~~~~~~~~---~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~-~~~ 97 (199)
T 2xvm_A 23 EVLEAVKVVK---PGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLN-NLTF-DRQ 97 (199)
T ss_dssp HHHHHTTTSC---SCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGG-GCCC-CCC
T ss_pred HHHHHhhccC---CCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchh-hCCC-CCC
Confidence 4555666555 679999999999999999999999999999999999998754 25789999984 4666 789
Q ss_pred ccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 114 VDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 114 fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
||+|++..+++|+...+ ...++..+.++|+|||.+++..
T Consensus 98 ~D~v~~~~~l~~~~~~~---------~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 98 YDFILSTVVLMFLEAKT---------IPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp EEEEEEESCGGGSCGGG---------HHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceEEEEcchhhhCCHHH---------HHHHHHHHHHhcCCCeEEEEEE
Confidence 99999999999985311 6789999999999999987643
No 66
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.69 E-value=1.6e-16 Score=134.95 Aligned_cols=102 Identities=21% Similarity=0.268 Sum_probs=86.8
Q ss_pred CCeEEEEcCCCchh-HHHHHHcCCeEEEEeCCHHHHHHHHhcC----CcceEEEccCCCCCCCCCCcccEEEECCchhhh
Q 043626 52 PRLLLDIGCGSGLS-GETLSENGHQWIGLDISQSMLNIALERE----VEGDLLLGDMGQGLGLRPGVVDGAISISAVQWL 126 (291)
Q Consensus 52 ~~~VLDiGcGsG~~-~~~L~~~g~~v~gvDis~~ml~~a~~~~----~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l 126 (291)
+.+|||||||+|.. ...++..+..++|+|+|+.|++.|+++. ..+.++.+|+. .+++++++||+|++..+++|+
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~ 102 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIR-KLPFKDESMSFVYSYGTIFHM 102 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTT-SCCSCTTCEEEEEECSCGGGS
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchh-hCCCCCCceeEEEEcChHHhC
Confidence 67999999999997 5666677899999999999999998764 35789999984 477878999999999999998
Q ss_pred ccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC
Q 043626 127 CNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP 163 (291)
Q Consensus 127 ~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~ 163 (291)
.. .....++.+++++|+|||.+++.++.
T Consensus 103 ~~---------~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 103 RK---------NDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp CH---------HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CH---------HHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 31 22778999999999999999998754
No 67
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.68 E-value=2.2e-16 Score=139.97 Aligned_cols=120 Identities=16% Similarity=0.158 Sum_probs=97.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc-C--CeEEEEeCCHH------HHHHHHhcC------
Q 043626 29 IIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN-G--HQWIGLDISQS------MLNIALERE------ 93 (291)
Q Consensus 29 ~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~-g--~~v~gvDis~~------ml~~a~~~~------ 93 (291)
+...|......+++.+.+.+ +.+|||||||+|.++..+++. | ..++|+|+|+. |++.|+++.
T Consensus 24 ~~~~~~~~~~~l~~~~~~~~---~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~ 100 (275)
T 3bkx_A 24 IQRRQTAHRLAIAEAWQVKP---GEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLG 100 (275)
T ss_dssp HHHHHHHHHHHHHHHHTCCT---TCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTG
T ss_pred HHHHHHHHHHHHHHHcCCCC---CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCC
Confidence 45567778888888888776 779999999999999999987 4 79999999997 899988764
Q ss_pred CcceEEEcc-CC-CCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc
Q 043626 94 VEGDLLLGD-MG-QGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 162 (291)
Q Consensus 94 ~~~~~~~~D-~~-~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~ 162 (291)
..+.++.+| +. ..+++.+++||+|+++.+++|+.+ ...+++.+..+++|||++++..+
T Consensus 101 ~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~-----------~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 101 DRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFAS-----------ANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp GGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSC-----------HHHHHHHHHHHTTTCSEEEEEEE
T ss_pred CceEEEECChhhhccCCCCCCCEEEEEEccchhhCCC-----------HHHHHHHHHHHhCCCCEEEEEEe
Confidence 247888887 32 345677899999999999999976 34577777777888999999653
No 68
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.68 E-value=2.7e-16 Score=136.52 Aligned_cols=129 Identities=27% Similarity=0.423 Sum_probs=96.8
Q ss_pred CCchhhccccccchhHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC-
Q 043626 15 YDDTEARKYTSSSRIIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE- 93 (291)
Q Consensus 15 y~~~~a~~Y~~~~~~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~- 93 (291)
|+ ..|..|+....... ...+.+.+++.+. + +.+|||||||+|.++..+++. ..++|+|+|+.|++.|+++.
T Consensus 4 y~-~~a~~yd~~~~~~~-~~~~~~~~~~~~~--~---~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~ 75 (243)
T 3d2l_A 4 YE-QFAYVYDELMQDVP-YPEWVAWVLEQVE--P---GKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAM 75 (243)
T ss_dssp ---CTTHHHHHHTTTCC-HHHHHHHHHHHSC--T---TCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHhhhccc-HHHHHHHHHHHcC--C---CCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhh
Confidence 44 56666765322111 2245555666543 2 469999999999999999988 89999999999999998864
Q ss_pred ---CcceEEEccCCCCCCCCCCcccEEEECC-chhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 94 ---VEGDLLLGDMGQGLGLRPGVVDGAISIS-AVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 94 ---~~~~~~~~D~~~~~~~~~~~fD~Vis~~-~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
..+.++.+|+. .+++. ++||+|++.. +++|+.+ ...+..+++.++++|+|||.+++.+
T Consensus 76 ~~~~~~~~~~~d~~-~~~~~-~~fD~v~~~~~~~~~~~~--------~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 76 ETNRHVDFWVQDMR-ELELP-EPVDAITILCDSLNYLQT--------EADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp HTTCCCEEEECCGG-GCCCS-SCEEEEEECTTGGGGCCS--------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcCCceEEEEcChh-hcCCC-CCcCEEEEeCCchhhcCC--------HHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 35789999984 45554 8999999987 8999843 1236789999999999999999853
No 69
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.68 E-value=1.1e-15 Score=132.25 Aligned_cols=136 Identities=12% Similarity=0.137 Sum_probs=102.5
Q ss_pred CCeEEEEcCC-CchhHHHHHHc-CCeEEEEeCCHHHHHHHHhcCC----cceEEEccCCCCCCCCCCcccEEEECCchhh
Q 043626 52 PRLLLDIGCG-SGLSGETLSEN-GHQWIGLDISQSMLNIALEREV----EGDLLLGDMGQGLGLRPGVVDGAISISAVQW 125 (291)
Q Consensus 52 ~~~VLDiGcG-sG~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~----~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~ 125 (291)
+.+|||+||| +|.++..++.. +..|+|+|+|+.|++.|+++.. .+.++++|+....++.+++||+|+++..+++
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~~ 135 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYYD 135 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC-
T ss_pred CCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCCcC
Confidence 6799999999 99999999998 7999999999999999987642 5789999974444566789999999977766
Q ss_pred hcccccc--------CCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeC
Q 043626 126 LCNADKA--------SHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDY 189 (291)
Q Consensus 126 l~~~~~~--------~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~ 189 (291)
..+.... .......+..++..+.++|+|||++++.+ +........+...+.+.||.. ..+.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~-~~~~~~~~~~~~~l~~~g~~~-~~~~~ 205 (230)
T 3evz_A 136 KPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYL-PDKEKLLNVIKERGIKLGYSV-KDIKF 205 (230)
T ss_dssp --------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEE-ESCHHHHHHHHHHHHHTTCEE-EEEEE
T ss_pred CccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEe-cccHhHHHHHHHHHHHcCCce-EEEEe
Confidence 5432110 00111224789999999999999999975 444567888999999999965 44444
No 70
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.68 E-value=3.5e-16 Score=134.48 Aligned_cols=101 Identities=25% Similarity=0.386 Sum_probs=85.9
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC----CcceEEEccCCCCCCCCCCcccEEEECCchhhhc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE----VEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLC 127 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~----~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~ 127 (291)
+.+|||||||+|.++..++..+..++|+|+|+.|++.|+++. ..+.++++|+. .+++++++||+|+++.++++..
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~~D~v~~~~~~~~~~ 117 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDAR-KLSFEDKTFDYVIFIDSIVHFE 117 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTT-SCCSCTTCEEEEEEESCGGGCC
T ss_pred CCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCceEEECchh-cCCCCCCcEEEEEEcCchHhCC
Confidence 569999999999999999999889999999999999998875 56899999984 4677778999999999844331
Q ss_pred cccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc
Q 043626 128 NADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 162 (291)
Q Consensus 128 ~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~ 162 (291)
. .....++..++++|+|||.+++...
T Consensus 118 ~---------~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 118 P---------LELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp H---------HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred H---------HHHHHHHHHHHHHcCCCcEEEEEec
Confidence 1 1267899999999999999998764
No 71
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.67 E-value=9.5e-16 Score=126.82 Aligned_cols=130 Identities=17% Similarity=0.141 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcC-----C-cceEEEccCC
Q 043626 33 QAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALERE-----V-EGDLLLGDMG 104 (291)
Q Consensus 33 q~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~-----~-~~~~~~~D~~ 104 (291)
...+...+++.+...+ +.+|||||||+|.++..++.. +..++|+|+|+.|++.|+++. . .+ ++.+|+.
T Consensus 10 ~~~~~~~~~~~~~~~~---~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~ 85 (178)
T 3hm2_A 10 KQHVRALAISALAPKP---HETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAP 85 (178)
T ss_dssp HHHHHHHHHHHHCCCT---TEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTT
T ss_pred HHHHHHHHHHHhcccC---CCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchH
Confidence 3456677788887765 679999999999999999988 589999999999999998763 2 35 7788875
Q ss_pred CCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 105 QGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 105 ~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
+.++...++||+|++..+++| ..++..++++|+|||++++.... ......+...+.+.|+.-
T Consensus 86 ~~~~~~~~~~D~i~~~~~~~~---------------~~~l~~~~~~L~~gG~l~~~~~~--~~~~~~~~~~~~~~~~~~ 147 (178)
T 3hm2_A 86 RAFDDVPDNPDVIFIGGGLTA---------------PGVFAAAWKRLPVGGRLVANAVT--VESEQMLWALRKQFGGTI 147 (178)
T ss_dssp GGGGGCCSCCSEEEECC-TTC---------------TTHHHHHHHTCCTTCEEEEEECS--HHHHHHHHHHHHHHCCEE
T ss_pred hhhhccCCCCCEEEECCcccH---------------HHHHHHHHHhcCCCCEEEEEeec--cccHHHHHHHHHHcCCee
Confidence 555544489999999988876 16889999999999999988753 345667778888888653
No 72
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.67 E-value=4.5e-16 Score=133.93 Aligned_cols=114 Identities=24% Similarity=0.327 Sum_probs=96.8
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccccc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADK 131 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~ 131 (291)
+.+|||||||+|.++..++.. +|+|+|+.|++.++++ .+.++.+|+ ..+++..++||+|++..+++|+.+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~--~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~--- 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR--GVFVLKGTA-ENLPLKDESFDFALMVTTICFVDD--- 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT--TCEEEECBT-TBCCSCTTCEEEEEEESCGGGSSC---
T ss_pred CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc--CCEEEEccc-ccCCCCCCCeeEEEEcchHhhccC---
Confidence 459999999999999998876 9999999999999988 678999998 457787889999999999999976
Q ss_pred cCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCCh---------------------HHHHHHHHHHHHcCCCC
Q 043626 132 ASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESV---------------------AQRELILGAAMRAGFAG 183 (291)
Q Consensus 132 ~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~---------------------~~~~~i~~~~~~aGF~~ 183 (291)
...++..+.++|+|||.+++.+..... ...+.+..++.++||..
T Consensus 118 --------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~ 182 (219)
T 1vlm_A 118 --------PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEE 182 (219)
T ss_dssp --------HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEE
T ss_pred --------HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeE
Confidence 678999999999999999997643221 13567788888889875
No 73
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.67 E-value=4e-16 Score=139.48 Aligned_cols=103 Identities=19% Similarity=0.177 Sum_probs=86.1
Q ss_pred CCeEEEEcCCCchhHHHHHHcCC-eEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCC-CCCcccEEEECCch
Q 043626 52 PRLLLDIGCGSGLSGETLSENGH-QWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGL-RPGVVDGAISISAV 123 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~-~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~-~~~~fD~Vis~~~l 123 (291)
+.+|||||||+|..+..++..+. .++|+|+|+.|++.|+++.. .+.++++|+.. +++ .+++||+|++..++
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~fD~v~~~~~l 143 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYG-RHMDLGKEFDVISSQFSF 143 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTT-SCCCCSSCEEEEEEESCG
T ss_pred CCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccc-cccCCCCCcCEEEECchh
Confidence 67999999999999999988874 99999999999999988753 36889999844 566 57899999999999
Q ss_pred hhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc
Q 043626 124 QWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 162 (291)
Q Consensus 124 ~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~ 162 (291)
+|+.. +......++.+++++|+|||.+++.+.
T Consensus 144 ~~~~~-------~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 144 HYAFS-------TSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp GGGGS-------SHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhcC-------CHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 88421 122367899999999999999998763
No 74
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.67 E-value=3.5e-16 Score=130.02 Aligned_cols=120 Identities=13% Similarity=0.150 Sum_probs=94.2
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccccc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADK 131 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~ 131 (291)
+.+|||||||+|.++..+++.+ .++|+|+|+.|++. ...+.++++|+.+ ++.+++||+|+++..++|..+...
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~----~~~~~~~~~d~~~--~~~~~~fD~i~~n~~~~~~~~~~~ 96 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES----HRGGNLVRADLLC--SINQESVDVVVFNPPYVPDTDDPI 96 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT----CSSSCEEECSTTT--TBCGGGCSEEEECCCCBTTCCCTT
T ss_pred CCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc----ccCCeEEECChhh--hcccCCCCEEEECCCCccCCcccc
Confidence 5699999999999999999999 99999999999988 4568899999865 555689999999998887654311
Q ss_pred cCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 132 ASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 132 ~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
.........++..+.+.| |||.+++..... .+.+.+...+.++||..
T Consensus 97 --~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~--~~~~~l~~~l~~~gf~~ 143 (170)
T 3q87_B 97 --IGGGYLGREVIDRFVDAV-TVGMLYLLVIEA--NRPKEVLARLEERGYGT 143 (170)
T ss_dssp --TBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG--GCHHHHHHHHHHTTCEE
T ss_pred --ccCCcchHHHHHHHHhhC-CCCEEEEEEecC--CCHHHHHHHHHHCCCcE
Confidence 000011235777888888 999999876432 35667888899999986
No 75
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.67 E-value=1e-16 Score=138.91 Aligned_cols=112 Identities=15% Similarity=0.154 Sum_probs=95.2
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCC-CCcccEEEECCchhhhcccc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLR-PGVVDGAISISAVQWLCNAD 130 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~-~~~fD~Vis~~~l~~l~~~~ 130 (291)
+.+|||||||+|.++..+++.+..|+|+|+|+.|++.|+++...+.++++|+.+.+|+. +++||+|+++. +
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~------~-- 120 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR------G-- 120 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES------C--
T ss_pred CCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC------C--
Confidence 67999999999999999999999999999999999999999888999999997778888 89999999872 1
Q ss_pred ccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 131 KASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 131 ~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
...++..++++|+|||.++..... .....+...+.++||..
T Consensus 121 ---------~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~~~~~l~~~Gf~~ 161 (226)
T 3m33_A 121 ---------PTSVILRLPELAAPDAHFLYVGPR---LNVPEVPERLAAVGWDI 161 (226)
T ss_dssp ---------CSGGGGGHHHHEEEEEEEEEEESS---SCCTHHHHHHHHTTCEE
T ss_pred ---------HHHHHHHHHHHcCCCcEEEEeCCc---CCHHHHHHHHHHCCCeE
Confidence 336788999999999999933222 23346778899999985
No 76
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.67 E-value=1.8e-15 Score=126.15 Aligned_cols=131 Identities=15% Similarity=0.165 Sum_probs=104.1
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC-----Cc--ceEEEccCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE-----VE--GDLLLGDMGQGL 107 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~-----~~--~~~~~~D~~~~~ 107 (291)
..++.+++.+...+ +.+|||||||+|.++..++..+..++|+|+|+.+++.|+++. .+ +.++.+|+.+.
T Consensus 39 ~~~~~l~~~~~~~~---~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~- 114 (194)
T 1dus_A 39 KGTKILVENVVVDK---DDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN- 114 (194)
T ss_dssp HHHHHHHHHCCCCT---TCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT-
T ss_pred hHHHHHHHHcccCC---CCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc-
Confidence 45677888887765 779999999999999999998999999999999999998864 23 78999998653
Q ss_pred CCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 108 GLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 108 ~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
+..++||+|+++.+++|. ...+..++..++++|+|||.+++..... .....+...+.+. |..
T Consensus 115 -~~~~~~D~v~~~~~~~~~----------~~~~~~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~~l~~~-~~~ 176 (194)
T 1dus_A 115 -VKDRKYNKIITNPPIRAG----------KEVLHRIIEEGKELLKDNGEIWVVIQTK--QGAKSLAKYMKDV-FGN 176 (194)
T ss_dssp -CTTSCEEEEEECCCSTTC----------HHHHHHHHHHHHHHEEEEEEEEEEEEST--HHHHHHHHHHHHH-HSC
T ss_pred -cccCCceEEEECCCcccc----------hhHHHHHHHHHHHHcCCCCEEEEEECCC--CChHHHHHHHHHH-hcc
Confidence 346799999999887762 1226789999999999999999987654 3344566666666 654
No 77
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.67 E-value=2.2e-15 Score=128.85 Aligned_cols=127 Identities=19% Similarity=0.172 Sum_probs=103.6
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC-----C-cceEEEccCCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE-----V-EGDLLLGDMGQGLG 108 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~-----~-~~~~~~~D~~~~~~ 108 (291)
.+...+++.+.+.+ +.+|||||||+|.++..++..+..|+|+|+|+.|++.|+++. . .+.++.+|+.+.++
T Consensus 42 ~~~~~~l~~l~~~~---~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~ 118 (204)
T 3njr_A 42 PMRALTLAALAPRR---GELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA 118 (204)
T ss_dssp HHHHHHHHHHCCCT---TCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT
T ss_pred HHHHHHHHhcCCCC---CCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc
Confidence 44556777887766 679999999999999999999999999999999999998874 3 57899999865343
Q ss_pred CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 109 LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 109 ~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
. ...||+|++..++ + .. ++..++++|+|||++++... .......+...+.+.||..
T Consensus 119 ~-~~~~D~v~~~~~~----~-----------~~-~l~~~~~~LkpgG~lv~~~~--~~~~~~~~~~~l~~~g~~i 174 (204)
T 3njr_A 119 D-LPLPEAVFIGGGG----S-----------QA-LYDRLWEWLAPGTRIVANAV--TLESETLLTQLHARHGGQL 174 (204)
T ss_dssp T-SCCCSEEEECSCC----C-----------HH-HHHHHHHHSCTTCEEEEEEC--SHHHHHHHHHHHHHHCSEE
T ss_pred c-CCCCCEEEECCcc----c-----------HH-HHHHHHHhcCCCcEEEEEec--CcccHHHHHHHHHhCCCcE
Confidence 2 3579999987644 1 45 89999999999999999875 3467778888899999764
No 78
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.67 E-value=5.4e-16 Score=137.18 Aligned_cols=149 Identities=17% Similarity=0.163 Sum_probs=105.2
Q ss_pred CCeEEEEcCCCchhHHHHHHcCC-eEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCC-CCCCcccEEEECCch
Q 043626 52 PRLLLDIGCGSGLSGETLSENGH-QWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLG-LRPGVVDGAISISAV 123 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~-~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~-~~~~~fD~Vis~~~l 123 (291)
+.+|||+|||+|.++..++..+. .|+|+|+++.+++.|+++.. .+.++++|+.+..+ +..++||+|+++..+
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy 129 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPY 129 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCC
Confidence 67999999999999999999874 99999999999999988643 37899999855332 557899999998665
Q ss_pred hhh-----ccc----cccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC-cEEEeCCCCC
Q 043626 124 QWL-----CNA----DKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG-GVVVDYPHSS 193 (291)
Q Consensus 124 ~~l-----~~~----~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~-~~~~~~p~~~ 193 (291)
... .+. ....+.+...+..++..+.++|+|||++++.+.+ .....+...+.+.||.. .+...++...
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~~~~~l~~~~~~~~~~~~v~~~~~ 206 (259)
T 3lpm_A 130 FATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP---ERLLDIIDIMRKYRLEPKRIQFVHPRSD 206 (259)
T ss_dssp -----------------------HHHHHHHHHHHHHEEEEEEEEEEECT---TTHHHHHHHHHHTTEEEEEEEEEESSTT
T ss_pred CCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH---HHHHHHHHHHHHCCCceEEEEEeecCCC
Confidence 433 111 1112334455788999999999999999997744 35566778888999986 2333345444
Q ss_pred CCCcEEEEEe
Q 043626 194 KSRKEFLVLT 203 (291)
Q Consensus 194 ~~~~~~l~l~ 203 (291)
+....+++..
T Consensus 207 ~~~~~~l~~~ 216 (259)
T 3lpm_A 207 REANTVLVEG 216 (259)
T ss_dssp SCCSEEEEEE
T ss_pred CCcEEEEEEE
Confidence 4444554443
No 79
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.66 E-value=6.8e-17 Score=145.39 Aligned_cols=120 Identities=13% Similarity=0.025 Sum_probs=88.0
Q ss_pred CCeEEEEcCCCchhHHHH----HHc--CCe--EEEEeCCHHHHHHHHhcCC------cceE--EEccCCCCC------CC
Q 043626 52 PRLLLDIGCGSGLSGETL----SEN--GHQ--WIGLDISQSMLNIALEREV------EGDL--LLGDMGQGL------GL 109 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L----~~~--g~~--v~gvDis~~ml~~a~~~~~------~~~~--~~~D~~~~~------~~ 109 (291)
+.+|||||||+|.++..+ +.. +.. ++|+|+|+.|++.|+++.. .+.+ ..+++. .+ ++
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~ 131 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSS-EYQSRMLEKK 131 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHH-HHHHHHHTTT
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchh-hhhhhhcccc
Confidence 569999999999766433 332 243 4999999999999987642 2333 344432 22 25
Q ss_pred CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCCh---------------------HH
Q 043626 110 RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESV---------------------AQ 168 (291)
Q Consensus 110 ~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~---------------------~~ 168 (291)
.+++||+|++..+++|+.| +..+|.+++++|||||++++.+...+. ..
T Consensus 132 ~~~~fD~V~~~~~l~~~~d-----------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVKD-----------IPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYIT 200 (292)
T ss_dssp CCCCEEEEEEESCGGGCSC-----------HHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCC
T ss_pred CCCceeEEEEeeeeeecCC-----------HHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCC
Confidence 6789999999999999988 778999999999999999987533211 12
Q ss_pred HHHHHHHHHHcCCCC
Q 043626 169 RELILGAAMRAGFAG 183 (291)
Q Consensus 169 ~~~i~~~~~~aGF~~ 183 (291)
...+..++.++||..
T Consensus 201 ~~~~~~~l~~aGf~~ 215 (292)
T 2aot_A 201 SDDLTQMLDNLGLKY 215 (292)
T ss_dssp HHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHCCCce
Confidence 346777888888864
No 80
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.66 E-value=8.8e-16 Score=130.53 Aligned_cols=112 Identities=15% Similarity=0.165 Sum_probs=91.5
Q ss_pred CCeEEEEcCCCchhHHHHHHcCC-eEEEEeCCHHHHHHHHhcCC---cceEEEccCCCCCCCCCCcccEEEECCchhhhc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGH-QWIGLDISQSMLNIALEREV---EGDLLLGDMGQGLGLRPGVVDGAISISAVQWLC 127 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~-~v~gvDis~~ml~~a~~~~~---~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~ 127 (291)
+.+|||||||+|.++..+++.+. .++|+|+|+.+++.|+++.. .+.++.+|+. .+++.+++||+|+++.+++++.
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~-~~~~~~~~fD~v~~~~~~~~~~ 121 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVR-KLDFPSASFDVVLEKGTLDALL 121 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTT-SCCSCSSCEEEEEEESHHHHHT
T ss_pred CCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchh-cCCCCCCcccEEEECcchhhhc
Confidence 67999999999999999999985 89999999999999998763 5789999984 4678788999999999998875
Q ss_pred cccccCC----chHHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 043626 128 NADKASH----EPRLRLKAFFGSLYRCLARGARAVFQIYPE 164 (291)
Q Consensus 128 ~~~~~~~----~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~ 164 (291)
....... +.......++.++.++|+|||.+++..+..
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 122 AGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp TTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 2111000 123346899999999999999999988644
No 81
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.66 E-value=3.2e-16 Score=140.16 Aligned_cols=109 Identities=17% Similarity=0.204 Sum_probs=90.4
Q ss_pred HHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC----cceEEEccCCCCCCCCCCcc
Q 043626 39 RALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV----EGDLLLGDMGQGLGLRPGVV 114 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~----~~~~~~~D~~~~~~~~~~~f 114 (291)
.+++.+...+ +.+|||||||+|.++..|++.|..|+|+|+|+.|++.|+++.. .+.++++|+.. +++ .++|
T Consensus 111 ~~~~~~~~~~---~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~-~~~f 185 (286)
T 3m70_A 111 DVVDAAKIIS---PCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDINA-ANI-QENY 185 (286)
T ss_dssp HHHHHHHHSC---SCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGG-CCC-CSCE
T ss_pred HHHHHhhccC---CCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEEecccc-ccc-cCCc
Confidence 3344443333 6799999999999999999999999999999999999988653 57899999844 455 7899
Q ss_pred cEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 115 DGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 115 D~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
|+|+++.+++|+..++ +..++..+.++|+|||.+++..
T Consensus 186 D~i~~~~~~~~~~~~~---------~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 186 DFIVSTVVFMFLNRER---------VPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp EEEEECSSGGGSCGGG---------HHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEEccchhhCCHHH---------HHHHHHHHHHhcCCCcEEEEEE
Confidence 9999999999985422 6789999999999999988754
No 82
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.66 E-value=6.9e-16 Score=130.26 Aligned_cols=127 Identities=15% Similarity=0.123 Sum_probs=92.9
Q ss_pred CCeEEEEcCCCchhHHHHHHc-C--CeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCCCCCCCcccEEEECCc
Q 043626 52 PRLLLDIGCGSGLSGETLSEN-G--HQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGLGLRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~-g--~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~~~~~~~fD~Vis~~~ 122 (291)
+.+|||+|||+|.++..+++. + ..++|+|+|+.|++.|+++. ..+.++++|+.....+.+++||+|+++..
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 102 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLG 102 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEES
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCC
Confidence 679999999999999999987 2 69999999999999998874 35789999984433355689999999865
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC---ChHHHHHHHHHHHHcC
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE---SVAQRELILGAAMRAG 180 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~---~~~~~~~i~~~~~~aG 180 (291)
+ ++..+............++..+.++|+|||++++..+.. .......+..++....
T Consensus 103 ~--~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 161 (197)
T 3eey_A 103 Y--LPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVD 161 (197)
T ss_dssp B--CTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSC
T ss_pred c--ccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCC
Confidence 5 332222222233345679999999999999999987643 2234445555554433
No 83
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.66 E-value=9.5e-17 Score=139.86 Aligned_cols=139 Identities=13% Similarity=0.127 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcC----CcceEEEccCCCCC
Q 043626 33 QAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALERE----VEGDLLLGDMGQGL 107 (291)
Q Consensus 33 q~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~----~~~~~~~~D~~~~~ 107 (291)
...+.+.+..++. .+ +.+|||||||+|.++..|++.+ ..|+|+|+|+.|++.|+++. ..+.++.+|+.+ +
T Consensus 46 ~~~~~~~l~~~~~-~~---~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~ 120 (236)
T 1zx0_A 46 ETPYMHALAAAAS-SK---GGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWED-V 120 (236)
T ss_dssp GHHHHHHHHHHHT-TT---CEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHH-H
T ss_pred HHHHHHHHHhhcC-CC---CCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHH-h
Confidence 3455555555552 23 6799999999999999998876 48999999999999999876 347889999843 4
Q ss_pred --CCCCCcccEEEE-CCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC------------hHHHHHH
Q 043626 108 --GLRPGVVDGAIS-ISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES------------VAQRELI 172 (291)
Q Consensus 108 --~~~~~~fD~Vis-~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~------------~~~~~~i 172 (291)
++.+++||+|++ .+++ ++.+. .......++.+++++|||||++++..+... ....+..
T Consensus 121 ~~~~~~~~fD~V~~d~~~~-~~~~~------~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (236)
T 1zx0_A 121 APTLPDGHFDGILYDTYPL-SEETW------HTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQ 193 (236)
T ss_dssp GGGSCTTCEEEEEECCCCC-BGGGT------TTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHT
T ss_pred hcccCCCceEEEEECCccc-chhhh------hhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHH
Confidence 677899999999 5554 32221 112245789999999999999997532210 0112345
Q ss_pred HHHHHHcCCCC
Q 043626 173 LGAAMRAGFAG 183 (291)
Q Consensus 173 ~~~~~~aGF~~ 183 (291)
...+..+||..
T Consensus 194 ~~~l~~aGF~~ 204 (236)
T 1zx0_A 194 VPALLEAGFRR 204 (236)
T ss_dssp HHHHHHTTCCG
T ss_pred HHHHHHCCCCC
Confidence 56788999984
No 84
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.65 E-value=1.3e-15 Score=133.25 Aligned_cols=113 Identities=22% Similarity=0.409 Sum_probs=89.1
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC----cceEEEccCCCCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV----EGDLLLGDMGQGLGLR 110 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~----~~~~~~~D~~~~~~~~ 110 (291)
.+...++..+..++ +.+|||||||+|.++..|++.|..++|+|+|+.|++.|+++.. .+.++++|+.. +++
T Consensus 28 ~~~~~~~~~~~~~~---~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~~~- 102 (252)
T 1wzn_A 28 DFVEEIFKEDAKRE---VRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-IAF- 102 (252)
T ss_dssp HHHHHHHHHTCSSC---CCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-CCC-
T ss_pred HHHHHHHHHhcccC---CCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-ccc-
Confidence 34445555544444 6799999999999999999999999999999999999987642 47899999844 554
Q ss_pred CCcccEEEECC-chhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 111 PGVVDGAISIS-AVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 111 ~~~fD~Vis~~-~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
+++||+|++.. +++|+. ...+..++..++++|+|||.+++.+
T Consensus 103 ~~~fD~v~~~~~~~~~~~---------~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 103 KNEFDAVTMFFSTIMYFD---------EEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp CSCEEEEEECSSGGGGSC---------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCccEEEEcCCchhcCC---------HHHHHHHHHHHHHHcCCCeEEEEec
Confidence 47899999874 444442 2237789999999999999999876
No 85
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.65 E-value=5.6e-16 Score=140.22 Aligned_cols=122 Identities=18% Similarity=0.164 Sum_probs=99.9
Q ss_pred CCeEEEEcCCCchhHHHHH--Hc-CCeEEEEeCCHHHHHHHHhcCCc------ceEEEccCCCCCCCCCCcccEEEECCc
Q 043626 52 PRLLLDIGCGSGLSGETLS--EN-GHQWIGLDISQSMLNIALEREVE------GDLLLGDMGQGLGLRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~--~~-g~~v~gvDis~~ml~~a~~~~~~------~~~~~~D~~~~~~~~~~~fD~Vis~~~ 122 (291)
+.+|||||||+|.++..++ .. +..|+|+|+|+.|++.|+++... +.++++|+. .+++. ++||+|+++.+
T Consensus 119 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~-~~fD~v~~~~~ 196 (305)
T 3ocj_A 119 GCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAW-KLDTR-EGYDLLTSNGL 196 (305)
T ss_dssp TCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGG-GCCCC-SCEEEEECCSS
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchh-cCCcc-CCeEEEEECCh
Confidence 6799999999999999985 22 47999999999999999987643 789999984 46776 99999999999
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC------------------------------------h
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES------------------------------------V 166 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~------------------------------------~ 166 (291)
++|+++. .....++..++++|+|||++++..+... .
T Consensus 197 ~~~~~~~--------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (305)
T 3ocj_A 197 NIYEPDD--------ARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNAL 268 (305)
T ss_dssp GGGCCCH--------HHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCC
T ss_pred hhhcCCH--------HHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhcc
Confidence 9998662 1144689999999999999999763210 0
Q ss_pred HHHHHHHHHHHHcCCCC
Q 043626 167 AQRELILGAAMRAGFAG 183 (291)
Q Consensus 167 ~~~~~i~~~~~~aGF~~ 183 (291)
...+.+...+.++||..
T Consensus 269 ~~~~~~~~~l~~aGF~~ 285 (305)
T 3ocj_A 269 RTHAQTRAQLEEAGFTD 285 (305)
T ss_dssp CCHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHCCCEE
Confidence 24678889999999986
No 86
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.64 E-value=1.1e-16 Score=140.11 Aligned_cols=154 Identities=12% Similarity=0.141 Sum_probs=106.0
Q ss_pred cCCchhhccccccch---------hHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCH
Q 043626 14 FYDDTEARKYTSSSR---------IIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG-HQWIGLDISQ 83 (291)
Q Consensus 14 fy~~~~a~~Y~~~~~---------~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~ 83 (291)
.|+ ..+..|+.... +......+.+.+.+.+..+ +.+|||||||+|.++..+++.+ ..++|||+|+
T Consensus 19 ~w~-~~~~~yd~~~~~l~~~g~~vm~~we~~~m~~~a~~~~~~----G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~ 93 (236)
T 3orh_A 19 AWG-AAPAAYDAADTHLRILGKPVMERWETPYMHALAAAASSK----GGRVLEVGFGMAIAASKVQEAPIDEHWIIECND 93 (236)
T ss_dssp HHT-TSCEEECTTSSEEEETTEEEEEGGGHHHHHHHHHHHTTT----CEEEEEECCTTSHHHHHHTTSCEEEEEEEECCH
T ss_pred hHh-cCcCCCCcchhhhhhcCHHHHHHHHHHHHHHHHHhhccC----CCeEEEECCCccHHHHHHHHhCCcEEEEEeCCH
Confidence 344 56667776421 1122334455566665433 6799999999999999999875 7899999999
Q ss_pred HHHHHHHhcCC----cceEEEccCCCC-CCCCCCcccEEEEC-----CchhhhccccccCCchHHHHHHHHHHHHHhccC
Q 043626 84 SMLNIALEREV----EGDLLLGDMGQG-LGLRPGVVDGAISI-----SAVQWLCNADKASHEPRLRLKAFFGSLYRCLAR 153 (291)
Q Consensus 84 ~ml~~a~~~~~----~~~~~~~D~~~~-~~~~~~~fD~Vis~-----~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~Lkp 153 (291)
.|++.|+++.. .+.++.+|.... .+++.++||.|+.. .++.|+.+ ...++.+++++|||
T Consensus 94 ~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~-----------~~~~~~e~~rvLkP 162 (236)
T 3orh_A 94 GVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQ-----------FNFIKNHAFRLLKP 162 (236)
T ss_dssp HHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHH-----------HHHHHHTHHHHEEE
T ss_pred HHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeecccchhhhcc-----------hhhhhhhhhheeCC
Confidence 99999998654 356777776332 25678899999753 33444433 67899999999999
Q ss_pred CcEEEEEEc-----------CC-ChHHHHHHHHHHHHcCCCC
Q 043626 154 GARAVFQIY-----------PE-SVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 154 gG~lv~~~~-----------~~-~~~~~~~i~~~~~~aGF~~ 183 (291)
||+|+|... .. .....+.+...+.++||..
T Consensus 163 GG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~ 204 (236)
T 3orh_A 163 GGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp EEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCG
T ss_pred CCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeE
Confidence 999987421 10 0112344566788899985
No 87
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.64 E-value=6.3e-16 Score=131.46 Aligned_cols=113 Identities=20% Similarity=0.169 Sum_probs=94.7
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcCC-----cceEEEccCCCCCCCCCCcccEEEECCchhh
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALEREV-----EGDLLLGDMGQGLGLRPGVVDGAISISAVQW 125 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~~-----~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~ 125 (291)
+.+|||||||+|.++..+++.+ ..++|+|+|+.|++.|+++.. ++.++.+|+.. +.+++||+|+++.++++
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~~~~fD~i~~~~~~~~ 137 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLA---DVDGKFDLIVANILAEI 137 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT---TCCSCEEEEEEESCHHH
T ss_pred CCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccc---cCCCCceEEEECCcHHH
Confidence 6799999999999999999987 499999999999999988642 37899999844 34689999999988876
Q ss_pred hccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 126 LCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 126 l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
+ ..++..+.++|+|||++++..... .+...+...+.++||..
T Consensus 138 ~--------------~~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~~~~~~Gf~~ 179 (205)
T 3grz_A 138 L--------------LDLIPQLDSHLNEDGQVIFSGIDY--LQLPKIEQALAENSFQI 179 (205)
T ss_dssp H--------------HHHGGGSGGGEEEEEEEEEEEEEG--GGHHHHHHHHHHTTEEE
T ss_pred H--------------HHHHHHHHHhcCCCCEEEEEecCc--ccHHHHHHHHHHcCCce
Confidence 3 578999999999999999974332 35667888899999975
No 88
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.64 E-value=2.8e-16 Score=137.12 Aligned_cols=102 Identities=21% Similarity=0.105 Sum_probs=85.4
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC--cceEEEccCCCCCCCCC-----CcccEEEECCchh
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV--EGDLLLGDMGQGLGLRP-----GVVDGAISISAVQ 124 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~--~~~~~~~D~~~~~~~~~-----~~fD~Vis~~~l~ 124 (291)
+.+|||||||+|.++..|++.+..|+|+|+|+.|++.|+++.. .+.++++|+.+ +++.. ..||+|+++.+++
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~d~v~~~~~~~ 135 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTAANISYRLLDGLV-PEQAAQIHSEIGDANIYMRTGFH 135 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTC-HHHHHHHHHHHCSCEEEEESSST
T ss_pred CCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCcccCceEEECcccc-cccccccccccCccEEEEcchhh
Confidence 6799999999999999999998899999999999999998875 57899999844 22211 2499999999999
Q ss_pred hhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC
Q 043626 125 WLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP 163 (291)
Q Consensus 125 ~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~ 163 (291)
|+...+ ...++.+++++|+|||++++..+.
T Consensus 136 ~~~~~~---------~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 136 HIPVEK---------RELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp TSCGGG---------HHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred cCCHHH---------HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 986322 678999999999999997776544
No 89
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.64 E-value=1.9e-15 Score=125.90 Aligned_cols=129 Identities=16% Similarity=0.134 Sum_probs=104.5
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGLG 108 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~~ 108 (291)
.+...+++.+...+ +.+|||+|||+|.++..++..+..++|+|+|+.+++.++++. ..+.++.+|+...++
T Consensus 20 ~~~~~~~~~~~~~~---~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 96 (192)
T 1l3i_A 20 EVRCLIMCLAEPGK---NDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALC 96 (192)
T ss_dssp HHHHHHHHHHCCCT---TCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHT
T ss_pred HHHHHHHHhcCCCC---CCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcc
Confidence 45566777777665 679999999999999999998899999999999999998854 357888888744222
Q ss_pred CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 109 LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 109 ~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
. .++||+|++..++++ +..++..+.++|+|||.+++.... ......+...+.+.||..
T Consensus 97 ~-~~~~D~v~~~~~~~~--------------~~~~l~~~~~~l~~gG~l~~~~~~--~~~~~~~~~~l~~~g~~~ 154 (192)
T 1l3i_A 97 K-IPDIDIAVVGGSGGE--------------LQEILRIIKDKLKPGGRIIVTAIL--LETKFEAMECLRDLGFDV 154 (192)
T ss_dssp T-SCCEEEEEESCCTTC--------------HHHHHHHHHHTEEEEEEEEEEECB--HHHHHHHHHHHHHTTCCC
T ss_pred c-CCCCCEEEECCchHH--------------HHHHHHHHHHhcCCCcEEEEEecC--cchHHHHHHHHHHCCCce
Confidence 1 258999999887754 458899999999999999998753 456778888999999954
No 90
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.64 E-value=3e-15 Score=128.38 Aligned_cols=125 Identities=24% Similarity=0.336 Sum_probs=98.1
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCC--CCCCcccEEEECCc
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLG--LRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~--~~~~~fD~Vis~~~ 122 (291)
+..|||||||+|.++..++.. +..++|+|+|+.+++.|+++. .++.++++|+.. ++ +.+++||+|++++.
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD-LTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC-GGGTSCTTCCSEEEEESC
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCCCCCCEEEEECC
Confidence 569999999999999999987 479999999999999998864 468899999854 54 66789999999977
Q ss_pred hhhhccccccCCchH-HHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 123 VQWLCNADKASHEPR-LRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 123 l~~l~~~~~~~~~p~-~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
..|... .|++. .....++..+.++|+|||.+++.+. +......+.+.+..+||..
T Consensus 121 ~~~~~~----~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~--~~~~~~~~~~~~~~~g~~~ 176 (214)
T 1yzh_A 121 DPWPKK----RHEKRRLTYKTFLDTFKRILPENGEIHFKTD--NRGLFEYSLVSFSQYGMKL 176 (214)
T ss_dssp CCCCSG----GGGGGSTTSHHHHHHHHHHSCTTCEEEEEES--CHHHHHHHHHHHHHHTCEE
T ss_pred CCcccc----chhhhccCCHHHHHHHHHHcCCCcEEEEEeC--CHHHHHHHHHHHHHCCCee
Confidence 655421 11111 1135799999999999999999873 3345667788888899864
No 91
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.63 E-value=9.3e-15 Score=127.73 Aligned_cols=150 Identities=19% Similarity=0.177 Sum_probs=108.9
Q ss_pred HHHHHHHH---HhCCCCCCCCCeEEEEcCCCchhHHHHHHc-C--CeEEEEeCCHHHHHHHHhcCC---cceEEEccCCC
Q 043626 35 KLSERALE---LLALPDDGVPRLLLDIGCGSGLSGETLSEN-G--HQWIGLDISQSMLNIALEREV---EGDLLLGDMGQ 105 (291)
Q Consensus 35 ~~~~~~le---lL~~~~~~~~~~VLDiGcGsG~~~~~L~~~-g--~~v~gvDis~~ml~~a~~~~~---~~~~~~~D~~~ 105 (291)
.++..++. .|.+++ +.+|||+|||+|.++..|++. | ..|+|+|+|+.|++.+.++.. ++..+.+|...
T Consensus 61 klaa~i~~gl~~l~ikp---G~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~ 137 (233)
T 4df3_A 61 KLAAALLKGLIELPVKE---GDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARF 137 (233)
T ss_dssp HHHHHHHTTCSCCCCCT---TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTC
T ss_pred HHHHHHHhchhhcCCCC---CCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccC
Confidence 44444443 344555 889999999999999999986 4 799999999999999987654 47788888754
Q ss_pred C--CCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC-------hHHHHHHHHHH
Q 043626 106 G--LGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES-------VAQRELILGAA 176 (291)
Q Consensus 106 ~--~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~-------~~~~~~i~~~~ 176 (291)
. .++..+++|+|++....++- ...++.+++++|||||++++.+.... ........+.+
T Consensus 138 p~~~~~~~~~vDvVf~d~~~~~~-------------~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L 204 (233)
T 4df3_A 138 PEKYRHLVEGVDGLYADVAQPEQ-------------AAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTL 204 (233)
T ss_dssp GGGGTTTCCCEEEEEECCCCTTH-------------HHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHH
T ss_pred ccccccccceEEEEEEeccCChh-------------HHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHH
Confidence 2 35667899999876443321 45789999999999999998753322 23445566778
Q ss_pred HHcCCCCcEEEeC-CCCCCCCcEEEEEe
Q 043626 177 MRAGFAGGVVVDY-PHSSKSRKEFLVLT 203 (291)
Q Consensus 177 ~~aGF~~~~~~~~-p~~~~~~~~~l~l~ 203 (291)
..+||.....++. |+. ..+++++.
T Consensus 205 ~~~GF~l~e~i~L~pf~---~~H~lv~~ 229 (233)
T 4df3_A 205 MDGGLEIKDVVHLDPFD---RDHAMIYA 229 (233)
T ss_dssp HHTTCCEEEEEECTTTS---TTEEEEEE
T ss_pred HHCCCEEEEEEccCCCC---CceEEEEE
Confidence 8999987555554 332 34666553
No 92
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.63 E-value=8.6e-15 Score=125.94 Aligned_cols=132 Identities=16% Similarity=0.052 Sum_probs=88.2
Q ss_pred CCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHH----HHhcCCcceEEEccCCCC---CCCCCCcccEEEECCc
Q 043626 52 PRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNI----ALEREVEGDLLLGDMGQG---LGLRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~----a~~~~~~~~~~~~D~~~~---~~~~~~~fD~Vis~~~ 122 (291)
+.+|||||||+|..+..|++.. ..|+|+|+|+.|++. |+.+ .++.++.+|+... .++. ++||+|+++..
T Consensus 58 g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~~~ 135 (210)
T 1nt2_A 58 DERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQDIA 135 (210)
T ss_dssp SCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEECCC
T ss_pred CCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEEecc
Confidence 6799999999999999999874 799999999986543 3332 4577888888553 3443 89999998731
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC------CChHHHH-HHHHHHHHcCCCCcEEEeC-CCCCC
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP------ESVAQRE-LILGAAMRAGFAGGVVVDY-PHSSK 194 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~------~~~~~~~-~i~~~~~~aGF~~~~~~~~-p~~~~ 194 (291)
. + .....++.+++++|||||++++.+.. ..++... .-.+.+.++ |.....++. |..
T Consensus 136 ~-~------------~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~~p~~-- 199 (210)
T 1nt2_A 136 Q-K------------NQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKHGSLMPYH-- 199 (210)
T ss_dssp S-T------------THHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-SEEEEEEECTTTC--
T ss_pred C-h------------hHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh-cEEeeeecCCCCC--
Confidence 1 1 11345689999999999999998522 1112211 112336777 876444443 322
Q ss_pred CCcEEEEE
Q 043626 195 SRKEFLVL 202 (291)
Q Consensus 195 ~~~~~l~l 202 (291)
+.+|+++
T Consensus 200 -~~h~~~~ 206 (210)
T 1nt2_A 200 -RDHIFIH 206 (210)
T ss_dssp -TTEEEEE
T ss_pred -CCcEEEE
Confidence 3455554
No 93
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.63 E-value=1.2e-15 Score=138.45 Aligned_cols=123 Identities=15% Similarity=0.156 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHhCCC-CCCCCCeEEEEcCCCchhHHHHHHc-CCeEEEEeCCHHHHHHHHhcCC------------cce
Q 043626 32 IQAKLSERALELLALP-DDGVPRLLLDIGCGSGLSGETLSEN-GHQWIGLDISQSMLNIALEREV------------EGD 97 (291)
Q Consensus 32 iq~~~~~~~lelL~~~-~~~~~~~VLDiGcGsG~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~------------~~~ 97 (291)
+...+...+++.+... .+ +.+|||||||+|..+..+++. +..|+|+|+|+.|++.|+++.. .+.
T Consensus 16 ~k~~l~~~~~~~l~~~~~~--~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~ 93 (313)
T 3bgv_A 16 MKSVLIGEFLEKVRQKKKR--DITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAE 93 (313)
T ss_dssp HHHHHHHHHHHHHHHTC----CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEE
T ss_pred HHHHHHHHHHHHhhhccCC--CCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEE
Confidence 3445556666655432 11 679999999999999999876 4799999999999999987643 468
Q ss_pred EEEccCCCCC---CCC--CCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC
Q 043626 98 LLLGDMGQGL---GLR--PGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP 163 (291)
Q Consensus 98 ~~~~D~~~~~---~~~--~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~ 163 (291)
++++|+.... ++. +++||+|+|+.++||+.. +...+..+|.+++++|+|||.+++.+..
T Consensus 94 ~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~-------~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 94 FITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFE-------SYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp EEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGG-------SHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred EEEecccccchhhhcccCCCCEEEEEEecchhhccC-------CHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 9999985532 243 459999999999999822 1122578999999999999999998753
No 94
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.63 E-value=2.3e-15 Score=136.66 Aligned_cols=103 Identities=15% Similarity=0.092 Sum_probs=81.1
Q ss_pred CCeEEEEcCCCchhHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCc-----------ceEEEccCCCCC-------CCCCC
Q 043626 52 PRLLLDIGCGSGLSGETLSEN-GHQWIGLDISQSMLNIALEREVE-----------GDLLLGDMGQGL-------GLRPG 112 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~~-----------~~~~~~D~~~~~-------~~~~~ 112 (291)
+.+|||||||+|..+..++.. +..|+|+|+|+.||+.|+++... +++.+.|+.... +++.+
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~ 128 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFG 128 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSS
T ss_pred CCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCC
Confidence 579999999999866656555 47999999999999999987532 357777773211 34568
Q ss_pred cccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc
Q 043626 113 VVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 162 (291)
Q Consensus 113 ~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~ 162 (291)
+||+|+|..++||+.+.. ....++++++++|||||++++.+.
T Consensus 129 ~FD~V~~~~~lhy~~~~~--------~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 129 KFNIIDWQFAIHYSFHPR--------HYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp CEEEEEEESCGGGTCSTT--------THHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CeeEEEECchHHHhCCHH--------HHHHHHHHHHHHcCCCCEEEEEeC
Confidence 999999999999874421 146899999999999999999874
No 95
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.62 E-value=3.8e-15 Score=132.14 Aligned_cols=149 Identities=17% Similarity=0.169 Sum_probs=103.0
Q ss_pred CCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcCCc---------ceEEEccCCCCC------CCCCCcc
Q 043626 52 PRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALEREVE---------GDLLLGDMGQGL------GLRPGVV 114 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~~~---------~~~~~~D~~~~~------~~~~~~f 114 (291)
+.+|||||||+|.++..++..+ ..++|+|+++.|++.|+++... +.++++|+.+.. ++..++|
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~f 116 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHF 116 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCE
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCc
Confidence 6799999999999999999885 6999999999999999987654 789999986542 3567899
Q ss_pred cEEEECCchhhhcc---cc----ccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC-cEE
Q 043626 115 DGAISISAVQWLCN---AD----KASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG-GVV 186 (291)
Q Consensus 115 D~Vis~~~l~~l~~---~~----~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~-~~~ 186 (291)
|+|+++..+.+... .+ ...+.....+..++..+.++|+|||++++.+.+ .+...+...+.+. |.. .+.
T Consensus 117 D~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~~~~~l~~~-~~~~~i~ 192 (260)
T 2ozv_A 117 HHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRP---QSVAEIIAACGSR-FGGLEIT 192 (260)
T ss_dssp EEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECG---GGHHHHHHHHTTT-EEEEEEE
T ss_pred CEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcH---HHHHHHHHHHHhc-CCceEEE
Confidence 99999965543310 00 000111122678999999999999999998743 3556677777654 765 344
Q ss_pred EeCCCCCCCCcEEEEEee
Q 043626 187 VDYPHSSKSRKEFLVLTC 204 (291)
Q Consensus 187 ~~~p~~~~~~~~~l~l~~ 204 (291)
..++...+....+++.+.
T Consensus 193 ~v~~~~~~~~~~~lv~~~ 210 (260)
T 2ozv_A 193 LIHPRPGEDAVRMLVTAI 210 (260)
T ss_dssp EEESSTTSCCCEEEEEEE
T ss_pred EEcCCCCCCceEEEEEEE
Confidence 445555545455544443
No 96
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.62 E-value=1.9e-15 Score=128.88 Aligned_cols=109 Identities=22% Similarity=0.151 Sum_probs=92.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCC
Q 043626 34 AKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLG 108 (291)
Q Consensus 34 ~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~ 108 (291)
..+...+++.+.+.+ +.+|||||||+|.++..+++.+.+|+|+|+|+.+++.|+++. .++.++.+|+.. ..
T Consensus 63 ~~~~~~~~~~l~~~~---~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~ 138 (210)
T 3lbf_A 63 PYMVARMTELLELTP---QSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQ-GW 138 (210)
T ss_dssp HHHHHHHHHHTTCCT---TCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG-CC
T ss_pred HHHHHHHHHhcCCCC---CCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCccc-CC
Confidence 456677788887766 789999999999999999999999999999999999998864 347899999854 33
Q ss_pred CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC
Q 043626 109 LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP 163 (291)
Q Consensus 109 ~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~ 163 (291)
...++||+|++..+++|+.+ .+.++|+|||++++.+.+
T Consensus 139 ~~~~~~D~i~~~~~~~~~~~-----------------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 139 QARAPFDAIIVTAAPPEIPT-----------------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GGGCCEEEEEESSBCSSCCT-----------------HHHHTEEEEEEEEEEECS
T ss_pred ccCCCccEEEEccchhhhhH-----------------HHHHhcccCcEEEEEEcC
Confidence 44689999999999998854 478999999999998854
No 97
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.62 E-value=2.8e-15 Score=128.19 Aligned_cols=117 Identities=19% Similarity=0.228 Sum_probs=94.3
Q ss_pred HHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEE
Q 043626 39 RALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAI 118 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vi 118 (291)
.+++.+....+ +.+|||||||+|.++..+ +..++|+|+|+. .+.++.+|+. .+++.+++||+|+
T Consensus 57 ~~~~~l~~~~~--~~~vLDiG~G~G~~~~~l---~~~v~~~D~s~~----------~~~~~~~d~~-~~~~~~~~fD~v~ 120 (215)
T 2zfu_A 57 RIARDLRQRPA--SLVVADFGCGDCRLASSI---RNPVHCFDLASL----------DPRVTVCDMA-QVPLEDESVDVAV 120 (215)
T ss_dssp HHHHHHHTSCT--TSCEEEETCTTCHHHHHC---CSCEEEEESSCS----------STTEEESCTT-SCSCCTTCEEEEE
T ss_pred HHHHHHhccCC--CCeEEEECCcCCHHHHHh---hccEEEEeCCCC----------CceEEEeccc-cCCCCCCCEeEEE
Confidence 35555543222 679999999999998877 378999999987 4778999984 4778889999999
Q ss_pred ECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 119 SISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 119 s~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
+..++|| .+ ...++.+++++|+|||.+++..........+.+..++.++||..
T Consensus 121 ~~~~l~~-~~-----------~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~ 173 (215)
T 2zfu_A 121 FCLSLMG-TN-----------IRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKI 173 (215)
T ss_dssp EESCCCS-SC-----------HHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEE
T ss_pred Eehhccc-cC-----------HHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEE
Confidence 9999975 44 67899999999999999999865543346678889999999975
No 98
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.62 E-value=1e-14 Score=130.55 Aligned_cols=122 Identities=15% Similarity=0.147 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCeEEEEcCCC---chhHHHHHHc--CCeEEEEeCCHHHHHHHHhcC---CcceEEEccC
Q 043626 32 IQAKLSERALELLALPDDGVPRLLLDIGCGS---GLSGETLSEN--GHQWIGLDISQSMLNIALERE---VEGDLLLGDM 103 (291)
Q Consensus 32 iq~~~~~~~lelL~~~~~~~~~~VLDiGcGs---G~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~---~~~~~~~~D~ 103 (291)
.+..+..++++.|..... ...|||||||+ |.++..+... +..|+++|+|+.|++.|+++. ..+.++.+|+
T Consensus 60 ~~~~~~~~~~~~l~~~~~--~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~ 137 (274)
T 2qe6_A 60 ENRKVLVRGVRFLAGEAG--ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADV 137 (274)
T ss_dssp HHHHHHHHHHHHHHTTTC--CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCT
T ss_pred HHhHHHHHHHHHHhhccC--CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeC
Confidence 345566677777653221 46999999999 9988777664 589999999999999999876 3578999998
Q ss_pred CCCC----------CCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 043626 104 GQGL----------GLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE 164 (291)
Q Consensus 104 ~~~~----------~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~ 164 (291)
.+.. .+...+||+|+++.++||+++.+ ...+|.+++++|+|||+|++.....
T Consensus 138 ~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~---------~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 138 RDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDV---------VDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp TCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTT---------HHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCchhhhccchhhccCCCCCCEEEEEechhhhCCcHH---------HHHHHHHHHHhCCCCcEEEEEEecC
Confidence 5420 12235899999999999997632 5689999999999999999987653
No 99
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.62 E-value=7.8e-15 Score=121.36 Aligned_cols=125 Identities=14% Similarity=0.183 Sum_probs=102.8
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLGL 109 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~~ 109 (291)
.+.+.+++.+...+ +.+|||+|||+|.++..++..+..++|+|+|+.|++.|+++. ..+.++.+|+.+ ++
T Consensus 22 ~~~~~~~~~~~~~~---~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~--~~ 96 (183)
T 2yxd_A 22 EIRAVSIGKLNLNK---DDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED--VL 96 (183)
T ss_dssp HHHHHHHHHHCCCT---TCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH--HG
T ss_pred HHHHHHHHHcCCCC---CCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc--cc
Confidence 45666777777665 679999999999999999997789999999999999998875 357889999854 45
Q ss_pred CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 110 RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 110 ~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
+.++||+|+++.+ .+ +..++..+.++ |||.+++... +......+...+.+.||.-
T Consensus 97 ~~~~~D~i~~~~~----~~-----------~~~~l~~~~~~--~gG~l~~~~~--~~~~~~~~~~~l~~~g~~~ 151 (183)
T 2yxd_A 97 DKLEFNKAFIGGT----KN-----------IEKIIEILDKK--KINHIVANTI--VLENAAKIINEFESRGYNV 151 (183)
T ss_dssp GGCCCSEEEECSC----SC-----------HHHHHHHHHHT--TCCEEEEEES--CHHHHHHHHHHHHHTTCEE
T ss_pred cCCCCcEEEECCc----cc-----------HHHHHHHHhhC--CCCEEEEEec--ccccHHHHHHHHHHcCCeE
Confidence 5679999999877 22 56788888888 9999999874 4466778899999999864
No 100
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.61 E-value=2.4e-15 Score=132.86 Aligned_cols=137 Identities=20% Similarity=0.165 Sum_probs=105.1
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCCC---CCCcccEEEECC
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLGL---RPGVVDGAISIS 121 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~~---~~~~fD~Vis~~ 121 (291)
+.+|||||||+|..+..|+.. +.+|+++|+|+.|++.|+++. .++.++++|+.+ ++. ..++||+|+|..
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~-~~~~~~~~~~fD~I~s~a 159 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEV-LAREAGHREAYARAVARA 159 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHH-HTTSTTTTTCEEEEEEES
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHH-hhcccccCCCceEEEECC
Confidence 679999999999999999876 479999999999999998764 247899999843 332 247999999864
Q ss_pred chhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeCCCCCCCCcEEEE
Q 043626 122 AVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFLV 201 (291)
Q Consensus 122 ~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~p~~~~~~~~~l~ 201 (291)
+. + +..++..+.++|+|||++++...+...+++..+...+...||....+..+..........++
T Consensus 160 ~~----~-----------~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~ 224 (249)
T 3g89_A 160 VA----P-----------LCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLV 224 (249)
T ss_dssp SC----C-----------HHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEE
T ss_pred cC----C-----------HHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEE
Confidence 42 2 56889999999999999999877666778888889999999986445444222223344444
Q ss_pred Eee
Q 043626 202 LTC 204 (291)
Q Consensus 202 l~~ 204 (291)
++.
T Consensus 225 ~~~ 227 (249)
T 3g89_A 225 VLE 227 (249)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 101
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.61 E-value=1.7e-15 Score=127.31 Aligned_cols=102 Identities=17% Similarity=0.105 Sum_probs=83.7
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCC-CCCCcccEEEECCchh
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLG-LRPGVVDGAISISAVQ 124 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~-~~~~~fD~Vis~~~l~ 124 (291)
+.+|||+|||+|.++..++..+ .+|+|+|+|+.|++.|+++. ..++++++|+.+..+ +..++||+|+++.+++
T Consensus 45 ~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~ 124 (189)
T 3p9n_A 45 GLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYN 124 (189)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCTT
T ss_pred CCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCCC
Confidence 6799999999999999888877 58999999999999998865 357899999854322 3468999999998877
Q ss_pred hhccccccCCchHHHHHHHHHHHHH--hccCCcEEEEEEcC
Q 043626 125 WLCNADKASHEPRLRLKAFFGSLYR--CLARGARAVFQIYP 163 (291)
Q Consensus 125 ~l~~~~~~~~~p~~~l~~~l~~l~~--~LkpgG~lv~~~~~ 163 (291)
+.. ..+..++..+.+ +|+|||.++++...
T Consensus 125 ~~~----------~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 125 VDS----------ADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp SCH----------HHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred cch----------hhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 631 126789999999 99999999998754
No 102
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.61 E-value=3.6e-15 Score=134.39 Aligned_cols=150 Identities=18% Similarity=0.177 Sum_probs=103.5
Q ss_pred HHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcCCcceEE-EccCCCCCC---CCC
Q 043626 37 SERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALEREVEGDLL-LGDMGQGLG---LRP 111 (291)
Q Consensus 37 ~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~~~~~~~-~~D~~~~~~---~~~ 111 (291)
.+.+++.+.+... +..|||||||||.++..|++.| ..|+|||+|+.||+.+.++...+..+ ..++ ..++ ++.
T Consensus 73 l~~~l~~~~~~~~--g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni-~~l~~~~l~~ 149 (291)
T 3hp7_A 73 LEKALAVFNLSVE--DMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNF-RYAEPVDFTE 149 (291)
T ss_dssp HHHHHHHTTCCCT--TCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCG-GGCCGGGCTT
T ss_pred HHHHHHhcCCCcc--ccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcccceecccCc-eecchhhCCC
Confidence 3466777776543 6799999999999999999997 69999999999999976654443222 2233 1122 234
Q ss_pred CcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC-------------------hHHHHHH
Q 043626 112 GVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES-------------------VAQRELI 172 (291)
Q Consensus 112 ~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~-------------------~~~~~~i 172 (291)
.+||+|++..+++++ ..+|.+++++|+|||.+++.+.|.. ....+.+
T Consensus 150 ~~fD~v~~d~sf~sl--------------~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v 215 (291)
T 3hp7_A 150 GLPSFASIDVSFISL--------------NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETV 215 (291)
T ss_dssp CCCSEEEECCSSSCG--------------GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHH
T ss_pred CCCCEEEEEeeHhhH--------------HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHH
Confidence 469999998887764 4689999999999999998643311 1245678
Q ss_pred HHHHHHcCCCCcEEEeCCCC-CC-CCcEEEEEe
Q 043626 173 LGAAMRAGFAGGVVVDYPHS-SK-SRKEFLVLT 203 (291)
Q Consensus 173 ~~~~~~aGF~~~~~~~~p~~-~~-~~~~~l~l~ 203 (291)
..++..+||....+...|.. .. +..|++++.
T Consensus 216 ~~~~~~~Gf~v~~~~~spi~g~~gn~e~l~~~~ 248 (291)
T 3hp7_A 216 TAFAVDYGFSVKGLDFSPIQGGHGNIEFLAHLE 248 (291)
T ss_dssp HHHHHHTTEEEEEEEECSSCCGGGCCCEEEEEE
T ss_pred HHHHHHCCCEEEEEEECCCCCCCcCHHHHHHhh
Confidence 88899999986333333332 22 344444443
No 103
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.61 E-value=3.3e-15 Score=129.77 Aligned_cols=136 Identities=15% Similarity=0.171 Sum_probs=96.2
Q ss_pred HHHHH---HHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc-C-CeEEEEeCCHHHHHHHHhcC---CcceEEEccCCCC-
Q 043626 36 LSERA---LELLALPDDGVPRLLLDIGCGSGLSGETLSEN-G-HQWIGLDISQSMLNIALERE---VEGDLLLGDMGQG- 106 (291)
Q Consensus 36 ~~~~~---lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~-g-~~v~gvDis~~ml~~a~~~~---~~~~~~~~D~~~~- 106 (291)
+...+ ++.+.+.+ +.+|||||||+|.++..|++. + ..|+|+|+|+.|++.|+++. .++.++.+|+...
T Consensus 59 ~~~~i~~~l~~~~~~~---~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~ 135 (230)
T 1fbn_A 59 LAAAIIKGLKVMPIKR---DSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQ 135 (230)
T ss_dssp HHHHHHTTCCCCCCCT---TCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGG
T ss_pred HHHHHHhcccccCCCC---CCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcc
Confidence 33455 44444444 679999999999999999988 4 79999999999999988765 3578889998541
Q ss_pred --CCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC------hH--HHHHHHHHH
Q 043626 107 --LGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES------VA--QRELILGAA 176 (291)
Q Consensus 107 --~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~------~~--~~~~i~~~~ 176 (291)
+++. ++||+|++ ++.+ |. ....++.++.++|+|||.+++.+.+.. .. ..+.+. .+
T Consensus 136 ~~~~~~-~~~D~v~~-----~~~~-------~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l 200 (230)
T 1fbn_A 136 EYANIV-EKVDVIYE-----DVAQ-------PN-QAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-IL 200 (230)
T ss_dssp GGTTTS-CCEEEEEE-----CCCS-------TT-HHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HH
T ss_pred cccccC-ccEEEEEE-----ecCC-------hh-HHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HH
Confidence 4554 78999993 2222 11 135789999999999999999743211 01 224555 78
Q ss_pred HHcCCCCcEEEeC
Q 043626 177 MRAGFAGGVVVDY 189 (291)
Q Consensus 177 ~~aGF~~~~~~~~ 189 (291)
..+||......+.
T Consensus 201 ~~~Gf~~~~~~~~ 213 (230)
T 1fbn_A 201 EAGGFKIVDEVDI 213 (230)
T ss_dssp HHHTEEEEEEEEC
T ss_pred HHCCCEEEEEEcc
Confidence 8899976344443
No 104
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.60 E-value=2.6e-15 Score=127.13 Aligned_cols=98 Identities=17% Similarity=0.218 Sum_probs=82.5
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC----cceEEEccCCCCCCCCCCcccEEEECCchhhhc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV----EGDLLLGDMGQGLGLRPGVVDGAISISAVQWLC 127 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~----~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~ 127 (291)
+ +|||||||+|.++..++..+..++|+|+|+.|++.|+++.. .+.++.+|+. .+++.+++||+|+++. .|+
T Consensus 31 ~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~--~~~- 105 (202)
T 2kw5_A 31 G-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLA-DFDIVADAWEGIVSIF--CHL- 105 (202)
T ss_dssp S-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTT-TBSCCTTTCSEEEEEC--CCC-
T ss_pred C-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChh-hcCCCcCCccEEEEEh--hcC-
Confidence 5 99999999999999999999999999999999999988752 5788999984 4577788999999853 233
Q ss_pred cccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc
Q 043626 128 NADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 162 (291)
Q Consensus 128 ~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~ 162 (291)
+......++..+.++|+|||.+++.++
T Consensus 106 --------~~~~~~~~l~~~~~~L~pgG~l~~~~~ 132 (202)
T 2kw5_A 106 --------PSSLRQQLYPKVYQGLKPGGVFILEGF 132 (202)
T ss_dssp --------CHHHHHHHHHHHHTTCCSSEEEEEEEE
T ss_pred --------CHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 122367899999999999999999864
No 105
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.60 E-value=3.8e-15 Score=128.76 Aligned_cols=110 Identities=23% Similarity=0.249 Sum_probs=92.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC---cceEEEccCCCCCCCC
Q 043626 34 AKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV---EGDLLLGDMGQGLGLR 110 (291)
Q Consensus 34 ~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~---~~~~~~~D~~~~~~~~ 110 (291)
..+...+++.+...+ +.+|||||||+|.++..+++.+..|+|+|+|+.+++.|+++.. .+.++.+|+...++ .
T Consensus 56 ~~~~~~~~~~~~~~~---~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~ 131 (231)
T 1vbf_A 56 LNLGIFMLDELDLHK---GQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-E 131 (231)
T ss_dssp HHHHHHHHHHTTCCT---TCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-G
T ss_pred HHHHHHHHHhcCCCC---CCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc-c
Confidence 356777888887665 6799999999999999999999999999999999999998765 57899999855333 3
Q ss_pred CCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 043626 111 PGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE 164 (291)
Q Consensus 111 ~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~ 164 (291)
.++||+|++..+++|+.+ .+.++|+|||++++.+.+.
T Consensus 132 ~~~fD~v~~~~~~~~~~~-----------------~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 132 EKPYDRVVVWATAPTLLC-----------------KPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp GCCEEEEEESSBBSSCCH-----------------HHHHTEEEEEEEEEEECSS
T ss_pred CCCccEEEECCcHHHHHH-----------------HHHHHcCCCcEEEEEEcCC
Confidence 578999999999988732 5889999999999998544
No 106
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.60 E-value=6.7e-15 Score=126.65 Aligned_cols=125 Identities=19% Similarity=0.280 Sum_probs=95.7
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCC--CCCCcccEEEECCc
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLG--LRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~--~~~~~fD~Vis~~~ 122 (291)
+..|||||||+|.++..|+.. +..++|+|+|+.|++.|+++. .++.++.+|+.. ++ +++++||.|++++.
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~-l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT-LTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG-HHHHCCTTSCCEEEEESC
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCcCCcCEEEEECC
Confidence 569999999999999999987 589999999999999998763 357899999854 43 66789999998766
Q ss_pred hhhhccccccCCchHH-HHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 123 VQWLCNADKASHEPRL-RLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~-~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
..|... .++... ....++..++++|+|||.+++.+. +......+...+...||..
T Consensus 118 ~p~~~~----~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td--~~~~~~~~~~~~~~~g~~~ 173 (213)
T 2fca_A 118 DPWPKK----RHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD--NRGLFEYSLKSFSEYGLLL 173 (213)
T ss_dssp CCCCSG----GGGGGSTTSHHHHHHHHHHHTTSCEEEEEES--CHHHHHHHHHHHHHHTCEE
T ss_pred CCCcCc----cccccccCcHHHHHHHHHHcCCCCEEEEEeC--CHHHHHHHHHHHHHCCCcc
Confidence 555421 111111 125789999999999999999873 3445666777788888853
No 107
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.59 E-value=8e-15 Score=130.81 Aligned_cols=142 Identities=20% Similarity=0.189 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCC
Q 043626 33 QAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQ 105 (291)
Q Consensus 33 q~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~ 105 (291)
...+.+.+++.+. .+ +.+|||||||+|.++..++.. +..++|+|+|+.+++.|+++. ..+.++++|+..
T Consensus 95 te~l~~~~l~~~~-~~---~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~ 170 (276)
T 2b3t_A 95 TECLVEQALARLP-EQ---PCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFS 170 (276)
T ss_dssp HHHHHHHHHHHSC-SS---CCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTG
T ss_pred HHHHHHHHHHhcc-cC---CCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhh
Confidence 3456677777775 33 679999999999999999966 579999999999999998874 247899999855
Q ss_pred CCCCCCCcccEEEECCchhhhcc----ccccCCchH----------HHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHH
Q 043626 106 GLGLRPGVVDGAISISAVQWLCN----ADKASHEPR----------LRLKAFFGSLYRCLARGARAVFQIYPESVAQREL 171 (291)
Q Consensus 106 ~~~~~~~~fD~Vis~~~l~~l~~----~~~~~~~p~----------~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~ 171 (291)
. +..++||+|+++..+.+... .....++|. ..+..++..+.++|+|||.+++..... +.+.
T Consensus 171 ~--~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~ 245 (276)
T 2b3t_A 171 A--LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ---QGEA 245 (276)
T ss_dssp G--GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS---CHHH
T ss_pred h--cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch---HHHH
Confidence 3 33678999999855432211 011112332 335789999999999999999987544 4456
Q ss_pred HHHHHHHcCCCC
Q 043626 172 ILGAAMRAGFAG 183 (291)
Q Consensus 172 i~~~~~~aGF~~ 183 (291)
+...+.++||..
T Consensus 246 ~~~~l~~~Gf~~ 257 (276)
T 2b3t_A 246 VRQAFILAGYHD 257 (276)
T ss_dssp HHHHHHHTTCTT
T ss_pred HHHHHHHCCCcE
Confidence 777788899986
No 108
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.59 E-value=2.8e-14 Score=124.69 Aligned_cols=144 Identities=17% Similarity=0.089 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHhC---CCCCCCCCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHH----HHHhcCCcceEEEc
Q 043626 32 IQAKLSERALELLA---LPDDGVPRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLN----IALEREVEGDLLLG 101 (291)
Q Consensus 32 iq~~~~~~~lelL~---~~~~~~~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~----~a~~~~~~~~~~~~ 101 (291)
.+..+...++..|. +.+ +.+|||+|||+|.++..+++. ...|+|+|+|+.|++ .++++ .++.++++
T Consensus 57 ~~skla~~ll~~l~~~~l~~---g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-~nv~~i~~ 132 (232)
T 3id6_C 57 FRSKLAGAILKGLKTNPIRK---GTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-PNIFPLLA 132 (232)
T ss_dssp TTCHHHHHHHTTCSCCSCCT---TCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-TTEEEEEC
T ss_pred HHHHHHHHHHhhhhhcCCCC---CCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-CCeEEEEc
Confidence 35567777777765 444 789999999999999999976 369999999998854 34433 56889999
Q ss_pred cCCCCCC--CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCCh-------HHHHHH
Q 043626 102 DMGQGLG--LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESV-------AQRELI 172 (291)
Q Consensus 102 D~~~~~~--~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~-------~~~~~i 172 (291)
|+..... ...++||+|++..+.... ...++..+.++|||||++++.+.+... +.....
T Consensus 133 Da~~~~~~~~~~~~~D~I~~d~a~~~~-------------~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~ 199 (232)
T 3id6_C 133 DARFPQSYKSVVENVDVLYVDIAQPDQ-------------TDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTE 199 (232)
T ss_dssp CTTCGGGTTTTCCCEEEEEECCCCTTH-------------HHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHH
T ss_pred ccccchhhhccccceEEEEecCCChhH-------------HHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHH
Confidence 9854321 224689999998654221 234455666799999999998644321 112345
Q ss_pred HHHHHHcCCCCcEEEeC-CCC
Q 043626 173 LGAAMRAGFAGGVVVDY-PHS 192 (291)
Q Consensus 173 ~~~~~~aGF~~~~~~~~-p~~ 192 (291)
...+..+||+....++. |+.
T Consensus 200 ~~~L~~~gf~~~~~~~l~p~~ 220 (232)
T 3id6_C 200 VEKLENSNFETIQIINLDPYD 220 (232)
T ss_dssp HHHHHHTTEEEEEEEECTTTC
T ss_pred HHHHHHCCCEEEEEeccCCCc
Confidence 56677889987444444 443
No 109
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.59 E-value=3.5e-15 Score=129.14 Aligned_cols=120 Identities=14% Similarity=0.140 Sum_probs=89.5
Q ss_pred CCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCC--CCCCcccEEEECCc
Q 043626 52 PRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLG--LRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~--~~~~~fD~Vis~~~ 122 (291)
...|||||||+|.++..++..+ ..|+|||+|+.|++.|+++. .++.++++|+.+.++ +++++||.|++++.
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~ 114 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFP 114 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESC
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeCC
Confidence 5699999999999999999874 68999999999999998763 357899999755333 67899999999877
Q ss_pred hhhhcccc--ccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHH
Q 043626 123 VQWLCNAD--KASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMR 178 (291)
Q Consensus 123 l~~l~~~~--~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~ 178 (291)
..|..... .... ...++..++++|+|||.+++.+... ...+.+...+..
T Consensus 115 ~p~~~~~~~~rr~~-----~~~~l~~~~r~LkpGG~l~i~td~~--~~~~~~~~~~~~ 165 (218)
T 3dxy_A 115 DPWHKARHNKRRIV-----QVPFAELVKSKLQLGGVFHMATDWE--PYAEHMLEVMSS 165 (218)
T ss_dssp CCCCSGGGGGGSSC-----SHHHHHHHHHHEEEEEEEEEEESCH--HHHHHHHHHHHT
T ss_pred CCccchhhhhhhhh-----hHHHHHHHHHHcCCCcEEEEEeCCH--HHHHHHHHHHHh
Confidence 66643211 0000 1258999999999999999988432 334444544443
No 110
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.59 E-value=9e-15 Score=146.35 Aligned_cols=115 Identities=21% Similarity=0.219 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC---CeEEEEeCCHHHHHHHHhc-----------CCcceE
Q 043626 33 QAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG---HQWIGLDISQSMLNIALER-----------EVEGDL 98 (291)
Q Consensus 33 q~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g---~~v~gvDis~~ml~~a~~~-----------~~~~~~ 98 (291)
.....+.+++.+...+ +.+|||||||+|.++..|++.+ ..|+|+|+|+.|++.|+++ ...+.+
T Consensus 706 ~eqRle~LLelL~~~~---g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVef 782 (950)
T 3htx_A 706 SKQRVEYALKHIRESS---ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATL 782 (950)
T ss_dssp HHHHHHHHHHHHHHSC---CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEE
T ss_pred HHHHHHHHHHHhcccC---CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEE
Confidence 3345566666665444 6799999999999999999987 7999999999999999872 245899
Q ss_pred EEccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 99 LLGDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 99 ~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
+++|+ ..+++..++||+|++..+++|+.+ .....++..++++|+|| .+++.+
T Consensus 783 iqGDa-~dLp~~d~sFDlVV~~eVLeHL~d---------p~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 783 YDGSI-LEFDSRLHDVDIGTCLEVIEHMEE---------DQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp EESCT-TSCCTTSCSCCEEEEESCGGGSCH---------HHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred EECch-HhCCcccCCeeEEEEeCchhhCCh---------HHHHHHHHHHHHHcCCC-EEEEEe
Confidence 99998 457888899999999999999965 22557999999999999 777764
No 111
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.58 E-value=8.9e-15 Score=131.22 Aligned_cols=135 Identities=15% Similarity=0.107 Sum_probs=99.9
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCC-eEEEEeC-CHHHHHHHHhcC---------------Ccce
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGH-QWIGLDI-SQSMLNIALERE---------------VEGD 97 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~-~v~gvDi-s~~ml~~a~~~~---------------~~~~ 97 (291)
.+.+.+++...... +.+|||||||+|.++..++..|. .|+|+|+ |+.|++.|+++. ..+.
T Consensus 66 ~l~~~l~~~~~~~~---~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~ 142 (281)
T 3bzb_A 66 ALADTLCWQPELIA---GKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPK 142 (281)
T ss_dssp HHHHHHHHCGGGTT---TCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCE
T ss_pred HHHHHHHhcchhcC---CCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeE
Confidence 34445554443333 67999999999999999999885 9999999 899999998876 1355
Q ss_pred EEEccCCCCC-CC----CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhcc---C--CcEEEEEEcCCCh-
Q 043626 98 LLLGDMGQGL-GL----RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLA---R--GARAVFQIYPESV- 166 (291)
Q Consensus 98 ~~~~D~~~~~-~~----~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~Lk---p--gG~lv~~~~~~~~- 166 (291)
+...|.+... .+ ..++||+|++..+++|..+ ...++..+.++|+ | ||++++.+.+...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~-----------~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~ 211 (281)
T 3bzb_A 143 VVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQA-----------HDALLRSVKMLLALPANDPTAVALVTFTHHRPH 211 (281)
T ss_dssp EEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGG-----------HHHHHHHHHHHBCCTTTCTTCEEEEEECC----
T ss_pred EEEecCCCccHHHHhhccCCCCCEEEEeCcccChHH-----------HHHHHHHHHHHhcccCCCCCCEEEEEEEeeecc
Confidence 6656654322 11 3578999999889888755 7789999999999 9 9998887766442
Q ss_pred --HHHHHHHHHHHHcC-CCC
Q 043626 167 --AQRELILGAAMRAG-FAG 183 (291)
Q Consensus 167 --~~~~~i~~~~~~aG-F~~ 183 (291)
.....+...+.+.| |..
T Consensus 212 ~~~~~~~~~~~l~~~G~f~v 231 (281)
T 3bzb_A 212 LAERDLAFFRLVNADGALIA 231 (281)
T ss_dssp ----CTHHHHHHHHSTTEEE
T ss_pred cchhHHHHHHHHHhcCCEEE
Confidence 23456677888999 875
No 112
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.58 E-value=1.8e-14 Score=131.45 Aligned_cols=140 Identities=15% Similarity=0.161 Sum_probs=106.8
Q ss_pred HHHHHHHHHhCC--CCCCCCCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcC------CcceEEEccCC
Q 043626 35 KLSERALELLAL--PDDGVPRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALERE------VEGDLLLGDMG 104 (291)
Q Consensus 35 ~~~~~~lelL~~--~~~~~~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~ 104 (291)
.....+++.+.. .+ +.+|||||||+|..+..+++. +.+++++|+| .+++.|+++. ..+.++.+|+.
T Consensus 150 ~~~~~~~~~~~~~~~~---~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~ 225 (335)
T 2r3s_A 150 NPAQLIAQLVNENKIE---PLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAF 225 (335)
T ss_dssp HHHHHHHHHHTC--CC---CSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTT
T ss_pred hhHHHHHHhcccccCC---CCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccc
Confidence 344566777765 44 679999999999999999987 5799999999 9999998863 23889999985
Q ss_pred CCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC-------------------
Q 043626 105 QGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES------------------- 165 (291)
Q Consensus 105 ~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~------------------- 165 (291)
+ .+++. .||+|++..++||+.+ .....++++++++|+|||++++......
T Consensus 226 ~-~~~~~-~~D~v~~~~~l~~~~~---------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~ 294 (335)
T 2r3s_A 226 E-VDYGN-DYDLVLLPNFLHHFDV---------ATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLAT 294 (335)
T ss_dssp T-SCCCS-CEEEEEEESCGGGSCH---------HHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHH
T ss_pred c-CCCCC-CCcEEEEcchhccCCH---------HHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHee
Confidence 4 35443 4999999999999844 2267899999999999998887543211
Q ss_pred -----hHHHHHHHHHHHHcCCCCcEEEeC
Q 043626 166 -----VAQRELILGAAMRAGFAGGVVVDY 189 (291)
Q Consensus 166 -----~~~~~~i~~~~~~aGF~~~~~~~~ 189 (291)
....+.+..++.++||....+...
T Consensus 295 ~~~~~~~t~~~~~~ll~~aGf~~~~~~~~ 323 (335)
T 2r3s_A 295 TPNGDAYTFAEYESMFSNAGFSHSQLHSL 323 (335)
T ss_dssp SSSCCCCCHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCCCcCCHHHHHHHHHHCCCCeeeEEEC
Confidence 012567888899999987444333
No 113
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.58 E-value=2.8e-16 Score=133.48 Aligned_cols=143 Identities=20% Similarity=0.147 Sum_probs=87.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCC----cceEEEccCCCCC
Q 043626 34 AKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALEREV----EGDLLLGDMGQGL 107 (291)
Q Consensus 34 ~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~----~~~~~~~D~~~~~ 107 (291)
..+.+.+++.+....+ +.+|||+|||+|.++..+++. +..++|+|+|+.|++.|+++.. .+.++++|+.+
T Consensus 15 ~~~~~~~~~~l~~~~~--~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-- 90 (215)
T 4dzr_A 15 EVLVEEAIRFLKRMPS--GTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-- 90 (215)
T ss_dssp HHHHHHHHHHHTTCCT--TEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH--
T ss_pred HHHHHHHHHHhhhcCC--CCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh--
Confidence 4567778888765222 679999999999999999998 4699999999999999998765 35677777744
Q ss_pred CCCC-----CcccEEEECCchhhhcc-----ccccCCchHHHH----------HHHHHHHHHhccCCcE-EEEEEcCCCh
Q 043626 108 GLRP-----GVVDGAISISAVQWLCN-----ADKASHEPRLRL----------KAFFGSLYRCLARGAR-AVFQIYPESV 166 (291)
Q Consensus 108 ~~~~-----~~fD~Vis~~~l~~l~~-----~~~~~~~p~~~l----------~~~l~~l~~~LkpgG~-lv~~~~~~~~ 166 (291)
++.. ++||+|+++..+++..+ .....++|...+ ..++..++++|+|||+ +++.+..
T Consensus 91 ~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--- 167 (215)
T 4dzr_A 91 WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH--- 167 (215)
T ss_dssp HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT---
T ss_pred hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC---
Confidence 3444 89999999755533221 111112332222 7899999999999999 6665533
Q ss_pred HHHHHHHHHHH--HcCCCC
Q 043626 167 AQRELILGAAM--RAGFAG 183 (291)
Q Consensus 167 ~~~~~i~~~~~--~aGF~~ 183 (291)
.+...+...+. +.||..
T Consensus 168 ~~~~~~~~~l~~~~~gf~~ 186 (215)
T 4dzr_A 168 NQADEVARLFAPWRERGFR 186 (215)
T ss_dssp SCHHHHHHHTGGGGGGTEE
T ss_pred ccHHHHHHHHHHhhcCCce
Confidence 34456677777 889965
No 114
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.58 E-value=1.6e-14 Score=131.15 Aligned_cols=123 Identities=18% Similarity=0.091 Sum_probs=94.7
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcC---------CcceEEEccCCCCCCC-CCCcccEEEE
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALERE---------VEGDLLLGDMGQGLGL-RPGVVDGAIS 119 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~---------~~~~~~~~D~~~~~~~-~~~~fD~Vis 119 (291)
+.+|||||||+|.++..+++. ...+++||+|+.+++.|+++. ..+.++.+|+...+.. ..++||+|++
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~ 175 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVII 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEE
Confidence 679999999999999999987 379999999999999999876 3478899987442211 4689999999
Q ss_pred CCchhhhccccccCCchHHHH--HHHHHHHHHhccCCcEEEEEEcC--CChHHHHHHHHHHHHcCCCC
Q 043626 120 ISAVQWLCNADKASHEPRLRL--KAFFGSLYRCLARGARAVFQIYP--ESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 120 ~~~l~~l~~~~~~~~~p~~~l--~~~l~~l~~~LkpgG~lv~~~~~--~~~~~~~~i~~~~~~aGF~~ 183 (291)
....++.+ ...+ ..+++.++++|+|||+++++... ........+.+.+.++||..
T Consensus 176 d~~~~~~~---------~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~ 234 (304)
T 3bwc_A 176 DTTDPAGP---------ASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFAS 234 (304)
T ss_dssp ECC------------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSE
T ss_pred CCCCcccc---------chhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCc
Confidence 76654432 1112 58999999999999999998643 23456778889999999986
No 115
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.58 E-value=5.5e-15 Score=126.77 Aligned_cols=129 Identities=16% Similarity=0.140 Sum_probs=93.8
Q ss_pred HHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHH----Hhc-----CCcceEEEccCCCCC
Q 043626 39 RALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIA----LER-----EVEGDLLLGDMGQGL 107 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a----~~~-----~~~~~~~~~D~~~~~ 107 (291)
.+++.+...+ +.+|||||||+|.++..|++. +..|+|+|+|+.|++.+ +++ ..++.++++|+. .+
T Consensus 18 ~~~~~l~~~~---~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~-~l 93 (218)
T 3mq2_A 18 AEFEQLRSQY---DDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAE-RL 93 (218)
T ss_dssp HHHHHHHTTS---SEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCST-TC
T ss_pred HHHHHhhccC---CCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchh-hC
Confidence 3445555554 679999999999999999998 58999999999998853 221 225789999984 47
Q ss_pred CCCCCcccEEEECCc---h--hhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC---------------ChH
Q 043626 108 GLRPGVVDGAISISA---V--QWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE---------------SVA 167 (291)
Q Consensus 108 ~~~~~~fD~Vis~~~---l--~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~---------------~~~ 167 (291)
++..++ |.|+++.. + +|+.+ ...++.+++++|+|||++++.+... ...
T Consensus 94 ~~~~~~-d~v~~~~~~~~~~~~~~~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (218)
T 3mq2_A 94 PPLSGV-GELHVLMPWGSLLRGVLGS-----------SPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPD 161 (218)
T ss_dssp CSCCCE-EEEEEESCCHHHHHHHHTS-----------SSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHH
T ss_pred CCCCCC-CEEEEEccchhhhhhhhcc-----------HHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchH
Confidence 877766 77774432 2 24444 2588999999999999999975211 111
Q ss_pred -HHHHHHHHHHHcCCCC
Q 043626 168 -QRELILGAAMRAGFAG 183 (291)
Q Consensus 168 -~~~~i~~~~~~aGF~~ 183 (291)
..+.+...+..+||..
T Consensus 162 ~~~~~l~~~l~~aGf~i 178 (218)
T 3mq2_A 162 SADEWLAPRYAEAGWKL 178 (218)
T ss_dssp HHHHHHHHHHHHTTEEE
T ss_pred HHHHHHHHHHHHcCCCc
Confidence 2334778899999975
No 116
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.57 E-value=5.4e-15 Score=130.73 Aligned_cols=114 Identities=24% Similarity=0.269 Sum_probs=94.2
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC----cceEEEccCCCCCCCCCCcccEEEECCchhhhc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV----EGDLLLGDMGQGLGLRPGVVDGAISISAVQWLC 127 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~----~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~ 127 (291)
+.+|||+|||+|.++..+++.|..++|+|+|+.+++.|+++.. .+.++.+|+... ++.++||+|+++...++
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~--~~~~~fD~Vv~n~~~~~-- 196 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA--LPFGPFDLLVANLYAEL-- 196 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH--GGGCCEEEEEEECCHHH--
T ss_pred CCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc--CcCCCCCEEEECCcHHH--
Confidence 6799999999999999999998899999999999999988642 267888887443 34678999999866654
Q ss_pred cccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 128 NADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 128 ~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
+..++..+.++|+|||++++..... .+...+...+.++||..
T Consensus 197 ------------~~~~l~~~~~~LkpgG~lils~~~~--~~~~~v~~~l~~~Gf~~ 238 (254)
T 2nxc_A 197 ------------HAALAPRYREALVPGGRALLTGILK--DRAPLVREAMAGAGFRP 238 (254)
T ss_dssp ------------HHHHHHHHHHHEEEEEEEEEEEEEG--GGHHHHHHHHHHTTCEE
T ss_pred ------------HHHHHHHHHHHcCCCCEEEEEeecc--CCHHHHHHHHHHCCCEE
Confidence 4578999999999999999964332 35678888999999975
No 117
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.57 E-value=1.9e-14 Score=125.99 Aligned_cols=122 Identities=15% Similarity=0.099 Sum_probs=88.8
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhc-----------CCcceEEEccCCCCCC--CCCCcccE
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALER-----------EVEGDLLLGDMGQGLG--LRPGVVDG 116 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~-----------~~~~~~~~~D~~~~~~--~~~~~fD~ 116 (291)
...|||||||+|.++..|+.. +..++|||+|+.|++.|+++ ..++.++++|+...++ +..++||.
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~ 126 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTK 126 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEE
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeE
Confidence 568999999999999999987 37899999999999988753 2357899999865465 77899999
Q ss_pred EEECCchhhhccccccCCchHHH--HHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcC
Q 043626 117 AISISAVQWLCNADKASHEPRLR--LKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAG 180 (291)
Q Consensus 117 Vis~~~l~~l~~~~~~~~~p~~~--l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aG 180 (291)
|++++...|.... |. ..+ ...++..++++|+|||.+++.+. .......+...+...|
T Consensus 127 v~~~~~dp~~k~~----h~-krr~~~~~~l~~~~~~LkpGG~l~~~td--~~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 127 MFFLFPDPHFKRT----KH-KWRIISPTLLAEYAYVLRVGGLVYTITD--VLELHDWMCTHFEEHP 185 (235)
T ss_dssp EEEESCC----------------CCCHHHHHHHHHHEEEEEEEEEEES--CHHHHHHHHHHHHTST
T ss_pred EEEeCCCchhhhh----hh-hhhhhhHHHHHHHHHHCCCCCEEEEEeC--CHHHHHHHHHHHHHCC
Confidence 9987665554210 00 010 14799999999999999999873 3344555566665554
No 118
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.56 E-value=1.6e-14 Score=118.30 Aligned_cols=143 Identities=19% Similarity=0.132 Sum_probs=97.4
Q ss_pred HHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC-------
Q 043626 39 RALELLALPDDGVPRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLG------- 108 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~------- 108 (291)
.+++.+....+ +.+|||+|||+|.++..+++. +..++|+|+|+ |+.. ..+.++.+|+.+ .+
T Consensus 12 ~~~~~~~~~~~--~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----~~~~~~~~d~~~-~~~~~~~~~ 82 (180)
T 1ej0_A 12 EIQQSDKLFKP--GMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----VGVDFLQGDFRD-ELVMKALLE 82 (180)
T ss_dssp HHHHHHCCCCT--TCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----TTEEEEESCTTS-HHHHHHHHH
T ss_pred HHHHHhCCCCC--CCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----CcEEEEEccccc-chhhhhhhc
Confidence 45555554433 679999999999999999987 37999999999 7643 457889999844 34
Q ss_pred -CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEE
Q 043626 109 -LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVV 187 (291)
Q Consensus 109 -~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~ 187 (291)
+.+++||+|+++.+++|..+..............++..+.++|+|||.+++..+... ....+...+... |.. +.+
T Consensus 83 ~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~~~~~-~~~-~~~ 158 (180)
T 1ej0_A 83 RVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE--GFDEYLREIRSL-FTK-VKV 158 (180)
T ss_dssp HHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST--THHHHHHHHHHH-EEE-EEE
T ss_pred cCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC--cHHHHHHHHHHh-hhh-EEe
Confidence 567899999999888876541100000000126889999999999999999776543 223444555543 654 444
Q ss_pred eCCCCCC
Q 043626 188 DYPHSSK 194 (291)
Q Consensus 188 ~~p~~~~ 194 (291)
..|...+
T Consensus 159 ~~~~~~~ 165 (180)
T 1ej0_A 159 RKPDSSR 165 (180)
T ss_dssp ECCTTSC
T ss_pred ecCCccc
Confidence 4555443
No 119
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.56 E-value=3.2e-14 Score=130.10 Aligned_cols=123 Identities=17% Similarity=0.073 Sum_probs=97.2
Q ss_pred CCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCCCCCCCcccEEEECCch
Q 043626 52 PRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGLGLRPGVVDGAISISAV 123 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l 123 (291)
..+|||||||+|..+..+++.. ..++++|+ +.+++.|+++. ..+.++.+|+.+ +++. +||+|++..++
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~p~-~~D~v~~~~vl 245 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD--PLPA-GAGGYVLSAVL 245 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS--CCCC-SCSEEEEESCG
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC--CCCC-CCcEEEEehhh
Confidence 5799999999999999998863 68999999 99999998753 348899999864 3333 89999999999
Q ss_pred hhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCCh-------------------HHHHHHHHHHHHcCCCCc
Q 043626 124 QWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESV-------------------AQRELILGAAMRAGFAGG 184 (291)
Q Consensus 124 ~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~-------------------~~~~~i~~~~~~aGF~~~ 184 (291)
||+++ .....++++++++|+|||++++....... ...+.+..++.++||...
T Consensus 246 h~~~~---------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 316 (332)
T 3i53_A 246 HDWDD---------LSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVR 316 (332)
T ss_dssp GGSCH---------HHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEE
T ss_pred ccCCH---------HHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEE
Confidence 99865 22578999999999999999986432111 124568888999999863
Q ss_pred EEE
Q 043626 185 VVV 187 (291)
Q Consensus 185 ~~~ 187 (291)
.+.
T Consensus 317 ~~~ 319 (332)
T 3i53_A 317 AAH 319 (332)
T ss_dssp EEE
T ss_pred EEE
Confidence 333
No 120
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.55 E-value=2e-14 Score=122.01 Aligned_cols=127 Identities=15% Similarity=0.091 Sum_probs=92.4
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGL 107 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~ 107 (291)
.+.+.+++.+.......+.+|||||||+|..+..++.. +..++|+|+|+.+++.|+++. .++.++.+|+.+.
T Consensus 49 ~~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~- 127 (207)
T 1jsx_A 49 MLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEF- 127 (207)
T ss_dssp HHHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTS-
T ss_pred HHHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhC-
Confidence 34455555553221001569999999999999999986 589999999999999998753 2478899998553
Q ss_pred CCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 108 GLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 108 ~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
+ ..++||+|+++.. .+ +..++..+.++|+|||.+++...+.....+..+ +. ||..
T Consensus 128 ~-~~~~~D~i~~~~~----~~-----------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~---~~--g~~~ 182 (207)
T 1jsx_A 128 P-SEPPFDGVISRAF----AS-----------LNDMVSWCHHLPGEQGRFYALKGQMPEDEIALL---PE--EYQV 182 (207)
T ss_dssp C-CCSCEEEEECSCS----SS-----------HHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTS---CT--TEEE
T ss_pred C-ccCCcCEEEEecc----CC-----------HHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHH---hc--CCce
Confidence 3 3578999998642 12 568999999999999999999876554444332 22 7764
No 121
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.55 E-value=1.4e-14 Score=129.22 Aligned_cols=125 Identities=14% Similarity=0.086 Sum_probs=95.4
Q ss_pred HHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCC
Q 043626 36 LSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALERE------VEGDLLLGDMGQG 106 (291)
Q Consensus 36 ~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~ 106 (291)
....+++.+.+.+ +.+|||+|||+|.++..+++. +..++|+|+|+.+++.|+++. ..+.++.+|+.+
T Consensus 98 ~~~~~~~~~~~~~---~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~- 173 (275)
T 1yb2_A 98 DASYIIMRCGLRP---GMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD- 173 (275)
T ss_dssp --------CCCCT---TCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-
T ss_pred hHHHHHHHcCCCC---cCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-
Confidence 3345666666665 679999999999999999987 689999999999999998763 357889999865
Q ss_pred CCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 107 LGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 107 ~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
++..++||+|++. +++ ...++..+.++|+|||++++.... ..+...+...+..+||..
T Consensus 174 -~~~~~~fD~Vi~~-----~~~-----------~~~~l~~~~~~LkpgG~l~i~~~~--~~~~~~~~~~l~~~Gf~~ 231 (275)
T 1yb2_A 174 -FISDQMYDAVIAD-----IPD-----------PWNHVQKIASMMKPGSVATFYLPN--FDQSEKTVLSLSASGMHH 231 (275)
T ss_dssp -CCCSCCEEEEEEC-----CSC-----------GGGSHHHHHHTEEEEEEEEEEESS--HHHHHHHHHHSGGGTEEE
T ss_pred -cCcCCCccEEEEc-----CcC-----------HHHHHHHHHHHcCCCCEEEEEeCC--HHHHHHHHHHHHHCCCeE
Confidence 4556899999983 333 347899999999999999998743 346677888888899875
No 122
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.54 E-value=4.8e-14 Score=131.95 Aligned_cols=124 Identities=17% Similarity=0.064 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHhCC-CCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC----cceEEEccCCCCC
Q 043626 33 QAKLSERALELLAL-PDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV----EGDLLLGDMGQGL 107 (291)
Q Consensus 33 q~~~~~~~lelL~~-~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~----~~~~~~~D~~~~~ 107 (291)
...+.+.+.+.+.. ... +.+|||+|||+|.++..+++.+..|+|+|+|+.|++.|+++.. .+.++.+|+.. .
T Consensus 216 t~~ll~~l~~~l~~~~~~--~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~-~ 292 (381)
T 3dmg_A 216 SLLLLEALQERLGPEGVR--GRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDE-A 292 (381)
T ss_dssp HHHHHHHHHHHHCTTTTT--TCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTT-T
T ss_pred HHHHHHHHHHhhcccCCC--CCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhh-c
Confidence 34455555555531 111 6799999999999999999999999999999999999988653 47899999854 4
Q ss_pred CCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC
Q 043626 108 GLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES 165 (291)
Q Consensus 108 ~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~ 165 (291)
++..++||+|+++.+++|... ........++..+.++|+|||.+++...+..
T Consensus 293 ~~~~~~fD~Ii~npp~~~~~~------~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l 344 (381)
T 3dmg_A 293 LTEEARFDIIVTNPPFHVGGA------VILDVAQAFVNVAAARLRPGGVFFLVSNPFL 344 (381)
T ss_dssp SCTTCCEEEEEECCCCCTTCS------SCCHHHHHHHHHHHHHEEEEEEEEEEECTTS
T ss_pred cccCCCeEEEEECCchhhccc------ccHHHHHHHHHHHHHhcCcCcEEEEEEcCCC
Confidence 444689999999999887321 1112367899999999999999999886543
No 123
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.54 E-value=6.5e-15 Score=122.15 Aligned_cols=115 Identities=14% Similarity=0.067 Sum_probs=87.7
Q ss_pred HHHHHHHHHhC-CCCCCCCCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCC
Q 043626 35 KLSERALELLA-LPDDGVPRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALERE------VEGDLLLGDMGQG 106 (291)
Q Consensus 35 ~~~~~~lelL~-~~~~~~~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~ 106 (291)
.+.+.+++.+. ... +.+|||+|||+|.++..++..+ ..++|+|+|+.|++.|+++. ..+.++.+|+.+.
T Consensus 17 ~~~~~~~~~l~~~~~---~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 93 (177)
T 2esr_A 17 KVRGAIFNMIGPYFN---GGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA 93 (177)
T ss_dssp -CHHHHHHHHCSCCC---SCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH
T ss_pred HHHHHHHHHHHhhcC---CCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHh
Confidence 34556667775 333 6799999999999999999886 69999999999999998865 2468888887543
Q ss_pred CCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHH--HhccCCcEEEEEEcCC
Q 043626 107 LGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLY--RCLARGARAVFQIYPE 164 (291)
Q Consensus 107 ~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~--~~LkpgG~lv~~~~~~ 164 (291)
++...++||+|+++.++++. . ...++..+. ++|+|||.+++.+...
T Consensus 94 ~~~~~~~fD~i~~~~~~~~~-~-----------~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 94 IDCLTGRFDLVFLDPPYAKE-T-----------IVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp HHHBCSCEEEEEECCSSHHH-H-----------HHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHhhcCCCCEEEECCCCCcc-h-----------HHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 44445679999998765321 1 345666666 9999999999987554
No 124
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.54 E-value=7.7e-14 Score=126.13 Aligned_cols=145 Identities=15% Similarity=0.039 Sum_probs=98.3
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCC----------cceEEEccCCCCCCCCCCcccEEEE
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALEREV----------EGDLLLGDMGQGLGLRPGVVDGAIS 119 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~----------~~~~~~~D~~~~~~~~~~~fD~Vis 119 (291)
+.+|||||||+|.++..+++. ...|++||+|+.|++.|+++.. .+.++.+|+...+....++||+||+
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~ 163 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIIS 163 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEE
T ss_pred CCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEE
Confidence 679999999999999999987 3789999999999999998642 4789999986666556789999999
Q ss_pred CCchhhhccccccCCchHHHH--HHHHHHHHHhccCCcEEEEEEcC--CChHHHHHHHHHHHHcCCCCcEEEeCCCCCCC
Q 043626 120 ISAVQWLCNADKASHEPRLRL--KAFFGSLYRCLARGARAVFQIYP--ESVAQRELILGAAMRAGFAGGVVVDYPHSSKS 195 (291)
Q Consensus 120 ~~~l~~l~~~~~~~~~p~~~l--~~~l~~l~~~LkpgG~lv~~~~~--~~~~~~~~i~~~~~~aGF~~~~~~~~p~~~~~ 195 (291)
....++. |...+ ..+++.++++|+|||+++++... ........+...+... |........+-....
T Consensus 164 D~~~p~~---------~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~-F~~v~~~~~~vp~~p 233 (294)
T 3adn_A 164 DCTDPIG---------PGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHY-FSDVGFYQAAIPTYY 233 (294)
T ss_dssp CC-------------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHH-CSEEEEEEEECTTSS
T ss_pred CCCCccC---------cchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHH-CCCeEEEEEEecccC
Confidence 7654432 11223 68999999999999999998632 2334566666666666 764222111111222
Q ss_pred CcEEEEEeeCC
Q 043626 196 RKEFLVLTCGP 206 (291)
Q Consensus 196 ~~~~l~l~~g~ 206 (291)
...|.++++..
T Consensus 234 ~g~~~f~~as~ 244 (294)
T 3adn_A 234 GGIMTFAWATD 244 (294)
T ss_dssp SSEEEEEEEES
T ss_pred CCceEEEEEeC
Confidence 35666666554
No 125
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.54 E-value=2.7e-14 Score=123.98 Aligned_cols=119 Identities=13% Similarity=0.034 Sum_probs=86.4
Q ss_pred CCeEEEEcCCCchhHHHHHHc-C--CeEEEEeCCHHHHHHHHhcC---CcceEEEccCCCC--CCCCCCcccEEEECCch
Q 043626 52 PRLLLDIGCGSGLSGETLSEN-G--HQWIGLDISQSMLNIALERE---VEGDLLLGDMGQG--LGLRPGVVDGAISISAV 123 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~-g--~~v~gvDis~~ml~~a~~~~---~~~~~~~~D~~~~--~~~~~~~fD~Vis~~~l 123 (291)
+.+|||+|||+|.++..|++. + ..|+|+|+|+.|++.+.++. .++.++.+|+.+. +++..++||+|++..+.
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~~ 157 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQ 157 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCCC
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCCC
Confidence 679999999999999999987 2 79999999987655443322 5688999998653 34557899999996541
Q ss_pred hhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC------hH-HHHHHHHHHHHcCCCC
Q 043626 124 QWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES------VA-QRELILGAAMRAGFAG 183 (291)
Q Consensus 124 ~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~------~~-~~~~i~~~~~~aGF~~ 183 (291)
.+ ....++.++.++|+|||.+++.+.+.. .. ....-.+.+.++||..
T Consensus 158 ~~-------------~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 211 (233)
T 2ipx_A 158 PD-------------QTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKP 211 (233)
T ss_dssp TT-------------HHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEE
T ss_pred cc-------------HHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCce
Confidence 11 134678889999999999999765421 00 0111147778899976
No 126
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.54 E-value=2.5e-14 Score=131.77 Aligned_cols=109 Identities=22% Similarity=0.283 Sum_probs=85.0
Q ss_pred HHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCCCC
Q 043626 37 SERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGLGL 109 (291)
Q Consensus 37 ~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~~~ 109 (291)
.+.+.+.+.+.+ +.+|||||||+|.++..+++.| ..|+|+|+|+ |++.|+++. ..+.++.+|+. .+++
T Consensus 53 ~~~i~~~~~~~~---~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~-~~~~ 127 (340)
T 2fyt_A 53 RDFIYQNPHIFK---DKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIE-EVHL 127 (340)
T ss_dssp HHHHHHCGGGTT---TCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTT-TSCC
T ss_pred HHHHHhhhhhcC---CCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHH-HhcC
Confidence 344555555554 6799999999999999999997 4999999997 999998764 35789999984 4677
Q ss_pred CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEE
Q 043626 110 RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAV 158 (291)
Q Consensus 110 ~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv 158 (291)
+.++||+|++..+...+.+. ..+..++..+.++|+|||.++
T Consensus 128 ~~~~~D~Ivs~~~~~~l~~~--------~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 128 PVEKVDVIISEWMGYFLLFE--------SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCSCEEEEEECCCBTTBTTT--------CHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCcEEEEEEcCchhhccCH--------HHHHHHHHHHHhhcCCCcEEE
Confidence 77899999998643333210 116689999999999999998
No 127
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.54 E-value=3.8e-14 Score=124.23 Aligned_cols=126 Identities=18% Similarity=0.079 Sum_probs=101.6
Q ss_pred HHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCC
Q 043626 36 LSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALERE------VEGDLLLGDMGQG 106 (291)
Q Consensus 36 ~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~ 106 (291)
....+++.+.+.+ +.+|||+|||+|.++..++.. +..++++|+|+.+++.|+++. ..+.++.+|+.+
T Consensus 84 ~~~~~~~~~~~~~---~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~- 159 (258)
T 2pwy_A 84 DASAMVTLLDLAP---GMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEE- 159 (258)
T ss_dssp HHHHHHHHTTCCT---TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGG-
T ss_pred HHHHHHHHcCCCC---CCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhh-
Confidence 3456777777765 779999999999999999987 589999999999999998763 457889999854
Q ss_pred CCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 107 LGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 107 ~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
.+++.++||+|++. +++ ...++..+.++|+|||++++... ...+...+...+.+.||..
T Consensus 160 ~~~~~~~~D~v~~~-----~~~-----------~~~~l~~~~~~L~~gG~l~~~~~--~~~~~~~~~~~l~~~gf~~ 218 (258)
T 2pwy_A 160 AELEEAAYDGVALD-----LME-----------PWKVLEKAALALKPDRFLVAYLP--NITQVLELVRAAEAHPFRL 218 (258)
T ss_dssp CCCCTTCEEEEEEE-----SSC-----------GGGGHHHHHHHEEEEEEEEEEES--CHHHHHHHHHHHTTTTEEE
T ss_pred cCCCCCCcCEEEEC-----CcC-----------HHHHHHHHHHhCCCCCEEEEEeC--CHHHHHHHHHHHHHCCCce
Confidence 45667899999974 222 23688999999999999998773 2357778888888899975
No 128
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.54 E-value=6.2e-15 Score=125.67 Aligned_cols=102 Identities=13% Similarity=-0.001 Sum_probs=80.5
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcC-------CcceEEEccCCCCCCC-CCCc-ccEEEECC
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALERE-------VEGDLLLGDMGQGLGL-RPGV-VDGAISIS 121 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~-------~~~~~~~~D~~~~~~~-~~~~-fD~Vis~~ 121 (291)
+.+|||+|||+|.++..++..+ ..|+|+|+|+.|++.|+++. ..+.++.+|+.+.++. ..++ ||+|+++.
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 133 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDP 133 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECC
T ss_pred CCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECC
Confidence 5699999999999999887777 69999999999999998864 3578899997543332 3578 99999987
Q ss_pred chhhhccccccCCchHHHHHHHHHHH--HHhccCCcEEEEEEcCCC
Q 043626 122 AVQWLCNADKASHEPRLRLKAFFGSL--YRCLARGARAVFQIYPES 165 (291)
Q Consensus 122 ~l~~l~~~~~~~~~p~~~l~~~l~~l--~~~LkpgG~lv~~~~~~~ 165 (291)
+++ ..+ ...++..+ .++|+|||.+++...+..
T Consensus 134 ~~~-~~~-----------~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 134 PFH-FNL-----------AEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CSS-SCH-----------HHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCC-Ccc-----------HHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 743 211 45677777 567999999999886543
No 129
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.54 E-value=5.2e-14 Score=124.48 Aligned_cols=93 Identities=23% Similarity=0.308 Sum_probs=81.7
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccc
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNA 129 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~ 129 (291)
+.+|||||||+|.++..+++. +..++|+|+|+.|++.|+++...+.++.+|+ ..+++.+++||+|+++.+.
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~~------ 158 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASS-HRLPFSDTSMDAIIRIYAP------ 158 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCT-TSCSBCTTCEEEEEEESCC------
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcch-hhCCCCCCceeEEEEeCCh------
Confidence 679999999999999999987 6899999999999999999988889999998 4578888999999987552
Q ss_pred cccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC
Q 043626 130 DKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP 163 (291)
Q Consensus 130 ~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~ 163 (291)
.++.++.++|+|||.+++.+..
T Consensus 159 ------------~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 159 ------------CKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp ------------CCHHHHHHHEEEEEEEEEEEEC
T ss_pred ------------hhHHHHHHhcCCCcEEEEEEcC
Confidence 2467899999999999987754
No 130
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.54 E-value=9.7e-14 Score=121.76 Aligned_cols=129 Identities=15% Similarity=0.111 Sum_probs=103.4
Q ss_pred HHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcC-----Cc-ceEEEccCCCC
Q 043626 36 LSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALERE-----VE-GDLLLGDMGQG 106 (291)
Q Consensus 36 ~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~-----~~-~~~~~~D~~~~ 106 (291)
....++..+.+.+ +.+|||+|||+|.++..++.. +..++++|+|+.+++.|+++. .+ +.++.+|+.+.
T Consensus 81 ~~~~i~~~~~~~~---~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 157 (255)
T 3mb5_A 81 DAALIVAYAGISP---GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG 157 (255)
T ss_dssp HHHHHHHHTTCCT---TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC
T ss_pred HHHHHHHhhCCCC---CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc
Confidence 4456777777766 789999999999999999988 589999999999999999874 23 78999998643
Q ss_pred CCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcC--CCCc
Q 043626 107 LGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAG--FAGG 184 (291)
Q Consensus 107 ~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aG--F~~~ 184 (291)
+..++||+|+++.. + ...++..+.++|+|||++++... ...+...+...+.+.| |...
T Consensus 158 --~~~~~~D~v~~~~~-----~-----------~~~~l~~~~~~L~~gG~l~~~~~--~~~~~~~~~~~l~~~g~~f~~~ 217 (255)
T 3mb5_A 158 --IEEENVDHVILDLP-----Q-----------PERVVEHAAKALKPGGFFVAYTP--CSNQVMRLHEKLREFKDYFMKP 217 (255)
T ss_dssp --CCCCSEEEEEECSS-----C-----------GGGGHHHHHHHEEEEEEEEEEES--SHHHHHHHHHHHHHTGGGBSCC
T ss_pred --cCCCCcCEEEECCC-----C-----------HHHHHHHHHHHcCCCCEEEEEEC--CHHHHHHHHHHHHHcCCCcccc
Confidence 55788999998522 2 23678999999999999998763 3467778889999999 9873
Q ss_pred EEE
Q 043626 185 VVV 187 (291)
Q Consensus 185 ~~~ 187 (291)
.+.
T Consensus 218 ~~~ 220 (255)
T 3mb5_A 218 RTI 220 (255)
T ss_dssp EEE
T ss_pred EEE
Confidence 333
No 131
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=2.5e-14 Score=122.25 Aligned_cols=110 Identities=18% Similarity=0.151 Sum_probs=89.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC---CeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCC
Q 043626 34 AKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG---HQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQ 105 (291)
Q Consensus 34 ~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g---~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~ 105 (291)
..+...+++.+...+ +.+|||||||+|.++..+++.+ ..++++|+|+.+++.|+++. ..+.++.+|+..
T Consensus 63 ~~~~~~~~~~~~~~~---~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 139 (215)
T 2yxe_A 63 IHMVGMMCELLDLKP---GMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTL 139 (215)
T ss_dssp HHHHHHHHHHTTCCT---TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGG
T ss_pred HHHHHHHHHhhCCCC---CCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc
Confidence 355667777777665 6799999999999999999875 79999999999999998864 347888888743
Q ss_pred CCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 043626 106 GLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE 164 (291)
Q Consensus 106 ~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~ 164 (291)
.++ ..++||+|++..+++|+. ..+.++|+|||++++.+.+.
T Consensus 140 ~~~-~~~~fD~v~~~~~~~~~~-----------------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 140 GYE-PLAPYDRIYTTAAGPKIP-----------------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp CCG-GGCCEEEEEESSBBSSCC-----------------HHHHHTEEEEEEEEEEESSS
T ss_pred CCC-CCCCeeEEEECCchHHHH-----------------HHHHHHcCCCcEEEEEECCC
Confidence 322 257899999999998873 26899999999999998654
No 132
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.54 E-value=2.1e-13 Score=126.72 Aligned_cols=138 Identities=12% Similarity=0.052 Sum_probs=105.8
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALERE------VEGDLLLGDMGQG 106 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~ 106 (291)
.....+++.+.+.. ..+|||||||+|.++..+++. +..++++|+ +.+++.|+++. ..+.++.+|+..
T Consensus 189 ~~~~~l~~~~~~~~---~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~- 263 (369)
T 3gwz_A 189 TEAGQVAAAYDFSG---AATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE- 263 (369)
T ss_dssp HHHHHHHHHSCCTT---CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-
T ss_pred hhHHHHHHhCCCcc---CcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-
Confidence 33456667766655 679999999999999999987 469999999 99999998754 348899999863
Q ss_pred CCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc--CCCh------------------
Q 043626 107 LGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY--PESV------------------ 166 (291)
Q Consensus 107 ~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~--~~~~------------------ 166 (291)
+++. .||+|++..++|++.+ .....++++++++|+|||++++... +...
T Consensus 264 -~~p~-~~D~v~~~~vlh~~~d---------~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~ 332 (369)
T 3gwz_A 264 -TIPD-GADVYLIKHVLHDWDD---------DDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGA 332 (369)
T ss_dssp -CCCS-SCSEEEEESCGGGSCH---------HHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCC
T ss_pred -CCCC-CceEEEhhhhhccCCH---------HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCc
Confidence 3333 8999999999999865 2245899999999999999998532 2210
Q ss_pred -HHHHHHHHHHHHcCCCCcEEEe
Q 043626 167 -AQRELILGAAMRAGFAGGVVVD 188 (291)
Q Consensus 167 -~~~~~i~~~~~~aGF~~~~~~~ 188 (291)
...+.+..++.++||....+..
T Consensus 333 ~~t~~e~~~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 333 ERSESEFAALLEKSGLRVERSLP 355 (369)
T ss_dssp CBCHHHHHHHHHTTTEEEEEEEE
T ss_pred cCCHHHHHHHHHHCCCeEEEEEE
Confidence 1245678889999998644433
No 133
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.53 E-value=1.1e-13 Score=128.20 Aligned_cols=136 Identities=16% Similarity=0.097 Sum_probs=102.9
Q ss_pred HHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCC
Q 043626 38 ERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGL 109 (291)
Q Consensus 38 ~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~ 109 (291)
..+++.+.+.. +.+|||||||+|.++..+++.+ ..++++|+ +.+++.|+++.. .+.++.+|+.+.+|
T Consensus 172 ~~~~~~~~~~~---~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~- 246 (374)
T 1qzz_A 172 EAPADAYDWSA---VRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLP- 246 (374)
T ss_dssp HHHHHTSCCTT---CCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS-
T ss_pred HHHHHhCCCCC---CCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCC-
Confidence 34555555554 6799999999999999999874 79999999 999999987642 47899999865343
Q ss_pred CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc----CCCh-------------------
Q 043626 110 RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY----PESV------------------- 166 (291)
Q Consensus 110 ~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~----~~~~------------------- 166 (291)
..||+|++..++||+.+ .....++++++++|+|||++++... +...
T Consensus 247 --~~~D~v~~~~vl~~~~~---------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (374)
T 1qzz_A 247 --VTADVVLLSFVLLNWSD---------EDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGR 315 (374)
T ss_dssp --CCEEEEEEESCGGGSCH---------HHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCC
T ss_pred --CCCCEEEEeccccCCCH---------HHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCc
Confidence 24999999999998855 2245899999999999999988654 3221
Q ss_pred -HHHHHHHHHHHHcCCCCcEEEeC
Q 043626 167 -AQRELILGAAMRAGFAGGVVVDY 189 (291)
Q Consensus 167 -~~~~~i~~~~~~aGF~~~~~~~~ 189 (291)
...+.+..++.++||....+...
T Consensus 316 ~~~~~~~~~ll~~aGf~~~~~~~~ 339 (374)
T 1qzz_A 316 VRTRDEVVDLAGSAGLALASERTS 339 (374)
T ss_dssp CCCHHHHHHHHHTTTEEEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCceEEEEEC
Confidence 13456778889999986444443
No 134
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.53 E-value=4.9e-15 Score=129.54 Aligned_cols=131 Identities=20% Similarity=0.214 Sum_probs=88.5
Q ss_pred HHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcCCcceEEE-ccCC--CCCCCCCC
Q 043626 37 SERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALEREVEGDLLL-GDMG--QGLGLRPG 112 (291)
Q Consensus 37 ~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~~~~~~~~-~D~~--~~~~~~~~ 112 (291)
.+.+++.+.+... +.+|||||||+|.++..|++.| ..|+|+|+|+.|++.|.++...+.... .++. ..-.+...
T Consensus 25 L~~~L~~~~~~~~--g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (232)
T 3opn_A 25 LEKALKEFHLEIN--GKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQG 102 (232)
T ss_dssp HHHHHHHTTCCCT--TCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSC
T ss_pred HHHHHHHcCCCCC--CCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcC
Confidence 4567777766543 6799999999999999999998 599999999999999888665422211 0110 00001111
Q ss_pred cccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC---------------C----hHHHHHHH
Q 043626 113 VVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE---------------S----VAQRELIL 173 (291)
Q Consensus 113 ~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~---------------~----~~~~~~i~ 173 (291)
.||.+.+..++.++ ..+|.+++++|+|||.+++.+.|. . ....+.+.
T Consensus 103 ~~d~~~~D~v~~~l--------------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~ 168 (232)
T 3opn_A 103 RPSFTSIDVSFISL--------------DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVL 168 (232)
T ss_dssp CCSEEEECCSSSCG--------------GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHH
T ss_pred CCCEEEEEEEhhhH--------------HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHH
Confidence 23444444333322 368999999999999999864221 0 12456788
Q ss_pred HHHHHcCCCC
Q 043626 174 GAAMRAGFAG 183 (291)
Q Consensus 174 ~~~~~aGF~~ 183 (291)
.++..+||..
T Consensus 169 ~~l~~aGf~v 178 (232)
T 3opn_A 169 KTATQLGFSV 178 (232)
T ss_dssp HHHHHHTEEE
T ss_pred HHHHHCCCEE
Confidence 9999999986
No 135
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.53 E-value=2.2e-14 Score=134.27 Aligned_cols=114 Identities=15% Similarity=0.158 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc-CC-eEEEEeCCHHHHHHHHhcC--------------C
Q 043626 31 DIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN-GH-QWIGLDISQSMLNIALERE--------------V 94 (291)
Q Consensus 31 ~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~-g~-~v~gvDis~~ml~~a~~~~--------------~ 94 (291)
.....++..+++.+.+.+ +..|||||||+|.++..++.. +. .++|||+|+.|+++|+++. .
T Consensus 156 Et~~~~i~~il~~l~l~~---gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~ 232 (438)
T 3uwp_A 156 ETSFDLVAQMIDEIKMTD---DDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHA 232 (438)
T ss_dssp GTHHHHHHHHHHHHCCCT---TCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCC
T ss_pred CCCHHHHHHHHHhcCCCC---CCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 344567788899998876 789999999999999998864 54 5999999999999997631 3
Q ss_pred cceEEEccCCCCCCCCC--CcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 95 EGDLLLGDMGQGLGLRP--GVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 95 ~~~~~~~D~~~~~~~~~--~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
.+.|+++|+.+ +++.. ..||+|+++..+.+ ++ +...|.++++.|||||++++.
T Consensus 233 rVefi~GD~~~-lp~~d~~~~aDVVf~Nn~~F~-pd-----------l~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 233 EYTLERGDFLS-EEWRERIANTSVIFVNNFAFG-PE-----------VDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp EEEEEECCTTS-HHHHHHHHTCSEEEECCTTCC-HH-----------HHHHHHHHHTTSCTTCEEEES
T ss_pred CeEEEECcccC-CccccccCCccEEEEcccccC-ch-----------HHHHHHHHHHcCCCCcEEEEe
Confidence 58999999944 55533 47999999876532 22 667788999999999999984
No 136
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.53 E-value=1.9e-14 Score=134.43 Aligned_cols=109 Identities=17% Similarity=0.152 Sum_probs=85.6
Q ss_pred HHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCC-eEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCCC
Q 043626 38 ERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGH-QWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGLR 110 (291)
Q Consensus 38 ~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~-~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~~ 110 (291)
+.+++.+.+.+ +.+|||||||+|.++..+++.|. +|+|+|+| .|++.|+++.. .+.++.+|+ ..++++
T Consensus 53 ~~i~~~~~~~~---~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~ 127 (376)
T 3r0q_C 53 NAVFQNKHHFE---GKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSV-EDISLP 127 (376)
T ss_dssp HHHHTTTTTTT---TCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCG-GGCCCS
T ss_pred HHHHhccccCC---CCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECch-hhcCcC
Confidence 33434444444 67999999999999999999985 99999999 99999987652 278999998 445554
Q ss_pred CCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 111 PGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 111 ~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
++||+|++..+.+++.... .+..++..++++|+|||.+++.
T Consensus 128 -~~~D~Iv~~~~~~~l~~e~--------~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 128 -EKVDVIISEWMGYFLLRES--------MFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp -SCEEEEEECCCBTTBTTTC--------THHHHHHHHHHHEEEEEEEESS
T ss_pred -CcceEEEEcChhhcccchH--------HHHHHHHHHHhhCCCCeEEEEe
Confidence 8999999977666654211 1668899999999999999873
No 137
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.53 E-value=5.3e-14 Score=123.52 Aligned_cols=126 Identities=20% Similarity=0.129 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc----CCeEEEEeCCHHHHHHHHhcCCc-----------
Q 043626 31 DIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN----GHQWIGLDISQSMLNIALEREVE----------- 95 (291)
Q Consensus 31 ~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~----g~~v~gvDis~~ml~~a~~~~~~----------- 95 (291)
.+...+.+.+++.+.... +.+|||+|||+|.++..++.. +..|+|+|+|+.|++.|+++...
T Consensus 34 ~la~~l~~~~l~~~~~~~---~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~ 110 (250)
T 1o9g_A 34 RLATEIFQRALARLPGDG---PVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTAREL 110 (250)
T ss_dssp HHHHHHHHHHHHTSSCCS---CEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCC---CCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccch
Confidence 344466777776654333 679999999999999999876 47899999999999999865321
Q ss_pred -----------------------ce-------------EEEccCCCCCCC----CCCcccEEEECCchhhhccccccCCc
Q 043626 96 -----------------------GD-------------LLLGDMGQGLGL----RPGVVDGAISISAVQWLCNADKASHE 135 (291)
Q Consensus 96 -----------------------~~-------------~~~~D~~~~~~~----~~~~fD~Vis~~~l~~l~~~~~~~~~ 135 (291)
+. ++++|+.+..+. ...+||+|+|+.++.+..+.. ...
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~--~~~ 188 (250)
T 1o9g_A 111 ERREQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWE--GQV 188 (250)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSS--SCC
T ss_pred hhhhhhhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeecccccc--ccc
Confidence 45 999998653321 345899999987665543211 012
Q ss_pred hHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 136 PRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 136 p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
.......++..++++|+|||++++..
T Consensus 189 ~~~~~~~~l~~~~~~LkpgG~l~~~~ 214 (250)
T 1o9g_A 189 PGQPVAGLLRSLASALPAHAVIAVTD 214 (250)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cccHHHHHHHHHHHhcCCCcEEEEeC
Confidence 33447789999999999999999843
No 138
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.52 E-value=5.3e-14 Score=118.87 Aligned_cols=122 Identities=19% Similarity=0.188 Sum_probs=83.3
Q ss_pred CCeEEEEcCCCchhHHHHHHc----CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC-------------------
Q 043626 52 PRLLLDIGCGSGLSGETLSEN----GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLG------------------- 108 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~----g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~------------------- 108 (291)
+.+|||||||+|.++..+++. +..++|+|+|+.+ ....+.++.+|+.. .+
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~------~~~~v~~~~~d~~~-~~~~~~~~~~~i~~~~~~~~~ 95 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD------PIPNVYFIQGEIGK-DNMNNIKNINYIDNMNNNSVD 95 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC------CCTTCEEEECCTTT-TSSCCC-----------CHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC------CCCCceEEEccccc-hhhhhhccccccccccchhhH
Confidence 679999999999999999986 3689999999831 23457899999854 33
Q ss_pred ------CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCC
Q 043626 109 ------LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFA 182 (291)
Q Consensus 109 ------~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~ 182 (291)
+..++||+|+++.+++|.................++..++++|+|||.+++.++... ....+...+.. .|.
T Consensus 96 ~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~--~~~~l~~~l~~-~f~ 172 (201)
T 2plw_A 96 YKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS--QTNNLKTYLKG-MFQ 172 (201)
T ss_dssp HHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST--THHHHHHHHHT-TEE
T ss_pred HHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC--CHHHHHHHHHH-HHh
Confidence 456799999999887764210000000001123588999999999999999776532 23344444443 465
Q ss_pred C
Q 043626 183 G 183 (291)
Q Consensus 183 ~ 183 (291)
.
T Consensus 173 ~ 173 (201)
T 2plw_A 173 L 173 (201)
T ss_dssp E
T ss_pred e
Confidence 4
No 139
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.52 E-value=7.5e-14 Score=129.53 Aligned_cols=121 Identities=10% Similarity=0.083 Sum_probs=95.9
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCC-CCCCCcccEEEECCc
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGL-GLRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~-~~~~~~fD~Vis~~~ 122 (291)
..+|||||||+|.++..+++. +..++++|+ +.|++.|+++.. .+.++.+|+.+.- |++ ++||+|++..+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~v 257 (363)
T 3dp7_A 180 PKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQF 257 (363)
T ss_dssp CSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEech
Confidence 679999999999999999985 479999999 999999998743 4789999986532 444 78999999999
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc--CCCh-------------------------HHHHHHHHH
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY--PESV-------------------------AQRELILGA 175 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~--~~~~-------------------------~~~~~i~~~ 175 (291)
+|++.+ .....+|++++++|+|||++++... +... ...+.+..+
T Consensus 258 lh~~~~---------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l 328 (363)
T 3dp7_A 258 LDCFSE---------EEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRC 328 (363)
T ss_dssp STTSCH---------HHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHH
T ss_pred hhhCCH---------HHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHH
Confidence 998854 2356899999999999999988532 2211 124567778
Q ss_pred HHHcCCCC
Q 043626 176 AMRAGFAG 183 (291)
Q Consensus 176 ~~~aGF~~ 183 (291)
+.++||..
T Consensus 329 l~~AGf~~ 336 (363)
T 3dp7_A 329 IENAGLEV 336 (363)
T ss_dssp HHTTTEEE
T ss_pred HHHcCCeE
Confidence 88888865
No 140
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.52 E-value=1.3e-14 Score=123.86 Aligned_cols=114 Identities=13% Similarity=-0.008 Sum_probs=86.4
Q ss_pred HHHHHHHHHhCCC-CCCCCCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCC
Q 043626 35 KLSERALELLALP-DDGVPRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGL 107 (291)
Q Consensus 35 ~~~~~~lelL~~~-~~~~~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~ 107 (291)
.+.+.+++.+... + +.+|||+|||+|.++..++..+ ..|+|+|+|+.|++.|+++. ..+.++++|+.+.+
T Consensus 40 ~~~~~l~~~l~~~~~---~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~ 116 (202)
T 2fpo_A 40 RVRETLFNWLAPVIV---DAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFL 116 (202)
T ss_dssp HHHHHHHHHHHHHHT---TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHhhcC---CCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHH
Confidence 3444555555432 2 5699999999999999888877 69999999999999998865 25789999975545
Q ss_pred CCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHH--hccCCcEEEEEEcC
Q 043626 108 GLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYR--CLARGARAVFQIYP 163 (291)
Q Consensus 108 ~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~--~LkpgG~lv~~~~~ 163 (291)
++..++||+|+++..++ ..+ ...++..+.+ +|+|||.+++...+
T Consensus 117 ~~~~~~fD~V~~~~p~~-~~~-----------~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 117 AQKGTPHNIVFVDPPFR-RGL-----------LEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp SSCCCCEEEEEECCSSS-TTT-----------HHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred hhcCCCCCEEEECCCCC-CCc-----------HHHHHHHHHhcCccCCCcEEEEEECC
Confidence 65667999999986643 212 4466777765 59999999998754
No 141
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.52 E-value=2.9e-15 Score=122.93 Aligned_cols=101 Identities=18% Similarity=0.133 Sum_probs=79.1
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC----cceEEEccCCCCCCC---CCCcccEEEECCchh
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV----EGDLLLGDMGQGLGL---RPGVVDGAISISAVQ 124 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~----~~~~~~~D~~~~~~~---~~~~fD~Vis~~~l~ 124 (291)
+.+|||+|||+|.++..++..+..++|+|+|+.|++.|+++.. .+.++++|+.+.++. ..++||+|+++.+++
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~ 121 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPYA 121 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT
T ss_pred CCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCCc
Confidence 5699999999999999999999789999999999999988654 578888887442221 134899999987765
Q ss_pred hhccccccCCchHHHHHHHHHHHH--HhccCCcEEEEEEcCCC
Q 043626 125 WLCNADKASHEPRLRLKAFFGSLY--RCLARGARAVFQIYPES 165 (291)
Q Consensus 125 ~l~~~~~~~~~p~~~l~~~l~~l~--~~LkpgG~lv~~~~~~~ 165 (291)
.+ ...++..+. ++|+|||.+++.+.+..
T Consensus 122 --~~-----------~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 122 --MD-----------LAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp --SC-----------TTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred --hh-----------HHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 22 224455555 99999999999886543
No 142
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.52 E-value=1.2e-13 Score=124.53 Aligned_cols=107 Identities=15% Similarity=0.123 Sum_probs=84.1
Q ss_pred HHHHHHHHhCCCCCCCCCeEEEEcCCCchhH-HHHHH-cCCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCC
Q 043626 36 LSERALELLALPDDGVPRLLLDIGCGSGLSG-ETLSE-NGHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLG 108 (291)
Q Consensus 36 ~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~-~~L~~-~g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~ 108 (291)
+++.-..++.+++ +.+|||||||+|.++ ..+++ .+.+|+|+|+|+.|++.|+++. ..+.++++|+.+ ++
T Consensus 110 l~~~E~~la~l~~---g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~-l~ 185 (298)
T 3fpf_A 110 LLKNEAALGRFRR---GERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETV-ID 185 (298)
T ss_dssp HHHHHHHHTTCCT---TCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG-GG
T ss_pred HHHHHHHHcCCCC---cCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhh-CC
Confidence 3444445677776 789999999998765 44555 3789999999999999999864 347899999844 44
Q ss_pred CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc
Q 043626 109 LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 162 (291)
Q Consensus 109 ~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~ 162 (291)
+++||+|++... ..+ ...++..++++|+|||++++...
T Consensus 186 --d~~FDvV~~~a~---~~d-----------~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 186 --GLEFDVLMVAAL---AEP-----------KRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp --GCCCSEEEECTT---CSC-----------HHHHHHHHHHHCCTTCEEEEEEC
T ss_pred --CCCcCEEEECCC---ccC-----------HHHHHHHHHHHcCCCcEEEEEcC
Confidence 689999997644 233 56899999999999999999764
No 143
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.52 E-value=5.5e-14 Score=119.17 Aligned_cols=155 Identities=15% Similarity=0.169 Sum_probs=95.1
Q ss_pred HHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC-------CC--
Q 043626 40 ALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLG-------LR-- 110 (291)
Q Consensus 40 ~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~-------~~-- 110 (291)
+++.+.+..+ +.+|||+|||+|.++..+++.+..|+|+|+++.. ....+.++++|+.+... +.
T Consensus 16 i~~~~~~~~~--g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~------~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 87 (191)
T 3dou_A 16 LLDRYRVVRK--GDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME------EIAGVRFIRCDIFKETIFDDIDRALREE 87 (191)
T ss_dssp HHHHHCCSCT--TCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC------CCTTCEEEECCTTSSSHHHHHHHHHHHH
T ss_pred HHHHcCCCCC--CCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc------cCCCeEEEEccccCHHHHHHHHHHhhcc
Confidence 3344444333 7799999999999999999999999999999742 23568999999854210 11
Q ss_pred -CCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeC
Q 043626 111 -PGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDY 189 (291)
Q Consensus 111 -~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~ 189 (291)
.++||+|+|+.+....................++..+.++|+|||.|++.++.... ...+...+ +..|.. +.+..
T Consensus 88 ~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~--~~~~~~~l-~~~F~~-v~~~k 163 (191)
T 3dou_A 88 GIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM--TNDFIAIW-RKNFSS-YKISK 163 (191)
T ss_dssp TCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH--HHHHHHHH-GGGEEE-EEEEC
T ss_pred cCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC--HHHHHHHH-HHhcCE-EEEEC
Confidence 14899999986543211100000011122467888999999999999998876543 33444444 445876 44445
Q ss_pred CCCCC-CCcEEEEEeeCC
Q 043626 190 PHSSK-SRKEFLVLTCGP 206 (291)
Q Consensus 190 p~~~~-~~~~~l~l~~g~ 206 (291)
|.+.+ ......++..|.
T Consensus 164 P~asR~~s~E~y~v~~~~ 181 (191)
T 3dou_A 164 PPASRGSSSEIYIMFFGF 181 (191)
T ss_dssp C------CCEEEEEEEEE
T ss_pred CCCccCCCceEEEEEeee
Confidence 55543 333333333443
No 144
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.51 E-value=1.9e-13 Score=121.51 Aligned_cols=130 Identities=18% Similarity=0.125 Sum_probs=101.5
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcC--------CcceEEEccC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALERE--------VEGDLLLGDM 103 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~--------~~~~~~~~D~ 103 (291)
.....+++.+.+.+ +.+|||+|||+|.++..++.. +..++++|+|+.+++.|+++. ..+.++.+|+
T Consensus 86 ~~~~~i~~~~~~~~---~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~ 162 (280)
T 1i9g_A 86 KDAAQIVHEGDIFP---GARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDL 162 (280)
T ss_dssp HHHHHHHHHTTCCT---TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG
T ss_pred HHHHHHHHHcCCCC---CCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECch
Confidence 44567777777766 679999999999999999985 589999999999999998763 3578899998
Q ss_pred CCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHH-cCCC
Q 043626 104 GQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMR-AGFA 182 (291)
Q Consensus 104 ~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~-aGF~ 182 (291)
.+ .++..++||+|++.. ++ ...++..+.++|+|||++++.... ..+...+...+.. .+|.
T Consensus 163 ~~-~~~~~~~~D~v~~~~-----~~-----------~~~~l~~~~~~L~pgG~l~~~~~~--~~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 163 AD-SELPDGSVDRAVLDM-----LA-----------PWEVLDAVSRLLVAGGVLMVYVAT--VTQLSRIVEALRAKQCWT 223 (280)
T ss_dssp GG-CCCCTTCEEEEEEES-----SC-----------GGGGHHHHHHHEEEEEEEEEEESS--HHHHHHHHHHHHHHSSBC
T ss_pred Hh-cCCCCCceeEEEECC-----cC-----------HHHHHHHHHHhCCCCCEEEEEeCC--HHHHHHHHHHHHhcCCcC
Confidence 44 466678999999842 22 236789999999999999997742 3566667777776 7887
Q ss_pred CcEE
Q 043626 183 GGVV 186 (291)
Q Consensus 183 ~~~~ 186 (291)
....
T Consensus 224 ~~~~ 227 (280)
T 1i9g_A 224 EPRA 227 (280)
T ss_dssp CCEE
T ss_pred CcEE
Confidence 6333
No 145
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.51 E-value=1.6e-13 Score=127.54 Aligned_cols=134 Identities=20% Similarity=0.264 Sum_probs=100.5
Q ss_pred HHHHHHHhC-CCCCCCCCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCc
Q 043626 37 SERALELLA-LPDDGVPRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGV 113 (291)
Q Consensus 37 ~~~~lelL~-~~~~~~~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~ 113 (291)
...+++.+. +.. ..+|||||||+|.++..|++.. ..++++|+ +.|++.+++. ..+.++.+|+.+ +++.+
T Consensus 191 ~~~~~~~~~~~~~---~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~--~~p~~- 262 (368)
T 3reo_A 191 MKKILEMYNGFEG---LTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-SGVEHLGGDMFD--GVPKG- 262 (368)
T ss_dssp HHHHHTTCCTTTT---CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT--CCCCC-
T ss_pred HHHHHHhcccccC---CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-CCCEEEecCCCC--CCCCC-
Confidence 344455444 333 6799999999999999999864 78999999 9999887654 568999999965 44444
Q ss_pred ccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc--CCCh-------------------------
Q 043626 114 VDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY--PESV------------------------- 166 (291)
Q Consensus 114 fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~--~~~~------------------------- 166 (291)
|+|++..++|++++ .....+|++++++|+|||++++... +...
T Consensus 263 -D~v~~~~vlh~~~~---------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~ 332 (368)
T 3reo_A 263 -DAIFIKWICHDWSD---------EHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKE 332 (368)
T ss_dssp -SEEEEESCGGGBCH---------HHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCC
T ss_pred -CEEEEechhhcCCH---------HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCcc
Confidence 99999999998855 2356899999999999999998532 2110
Q ss_pred HHHHHHHHHHHHcCCCCcEEEe
Q 043626 167 AQRELILGAAMRAGFAGGVVVD 188 (291)
Q Consensus 167 ~~~~~i~~~~~~aGF~~~~~~~ 188 (291)
...+.+..++.++||....+..
T Consensus 333 rt~~e~~~ll~~AGF~~v~~~~ 354 (368)
T 3reo_A 333 RTEKEFQALAMASGFRGFKVAS 354 (368)
T ss_dssp CCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCHHHHHHHHHHCCCeeeEEEE
Confidence 0145678889999998733333
No 146
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.51 E-value=6.8e-15 Score=128.11 Aligned_cols=108 Identities=15% Similarity=0.183 Sum_probs=84.9
Q ss_pred HHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHH--cCCeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCC
Q 043626 36 LSERALELLALPDDGVPRLLLDIGCGSGLSGETLSE--NGHQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGL 107 (291)
Q Consensus 36 ~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~--~g~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~ 107 (291)
....+..++...+ +.+|||||||+|.++..|+. .+..|+++|+|+.+++.|+++.. .+.++.+|+.+.+
T Consensus 59 ~~~~l~~~~~~~~---~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 135 (232)
T 3ntv_A 59 TLDLIKQLIRMNN---VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQF 135 (232)
T ss_dssp HHHHHHHHHHHHT---CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCH
T ss_pred HHHHHHHHHhhcC---CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHH
Confidence 3344444444444 67999999999999999998 45899999999999999988652 5789999986655
Q ss_pred C-CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 108 G-LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 108 ~-~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+ ...++||+|++...... +..++..+.++|+|||++++.
T Consensus 136 ~~~~~~~fD~V~~~~~~~~--------------~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 136 ENVNDKVYDMIFIDAAKAQ--------------SKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp HHHTTSCEEEEEEETTSSS--------------HHHHHHHHGGGEEEEEEEEEE
T ss_pred HhhccCCccEEEEcCcHHH--------------HHHHHHHHHHhcCCCeEEEEe
Confidence 5 44789999997643222 567999999999999999984
No 147
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.51 E-value=2.1e-13 Score=126.06 Aligned_cols=139 Identities=11% Similarity=0.070 Sum_probs=105.8
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcC-----C-cceEEEccCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALERE-----V-EGDLLLGDMGQG 106 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~-----~-~~~~~~~D~~~~ 106 (291)
.....+++.+.+.. +.+|||||||+|.++..+++. +.+++++|+ +.+++.|+++. . .+.++.+|+.+
T Consensus 177 ~~~~~l~~~~~~~~---~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~- 251 (359)
T 1x19_A 177 FAIQLLLEEAKLDG---VKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYK- 251 (359)
T ss_dssp HHHHHHHHHCCCTT---CCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTT-
T ss_pred hhHHHHHHhcCCCC---CCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCcccc-
Confidence 34456777776655 679999999999999999987 469999999 99999998763 2 38899999854
Q ss_pred CCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC--C-------------------C
Q 043626 107 LGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP--E-------------------S 165 (291)
Q Consensus 107 ~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~--~-------------------~ 165 (291)
.+++. +|+|++..++|++.+ .....++++++++|+|||++++.... . .
T Consensus 252 ~~~~~--~D~v~~~~vlh~~~d---------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~ 320 (359)
T 1x19_A 252 ESYPE--ADAVLFCRILYSANE---------QLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPF 320 (359)
T ss_dssp SCCCC--CSEEEEESCGGGSCH---------HHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSC
T ss_pred CCCCC--CCEEEEechhccCCH---------HHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCC
Confidence 35543 399999999998854 33678999999999999999775311 0 0
Q ss_pred h----HHHHHHHHHHHHcCCCCcEEEeC
Q 043626 166 V----AQRELILGAAMRAGFAGGVVVDY 189 (291)
Q Consensus 166 ~----~~~~~i~~~~~~aGF~~~~~~~~ 189 (291)
. ...+.+.+++.++||....+..+
T Consensus 321 ~~~~~~t~~e~~~ll~~aGf~~v~~~~~ 348 (359)
T 1x19_A 321 SVLGFKEQARYKEILESLGYKDVTMVRK 348 (359)
T ss_dssp CCCCCCCGGGHHHHHHHHTCEEEEEEEE
T ss_pred cccCCCCHHHHHHHHHHCCCceEEEEec
Confidence 0 34557788899999986444443
No 148
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.50 E-value=2.4e-13 Score=117.31 Aligned_cols=98 Identities=19% Similarity=0.180 Sum_probs=76.9
Q ss_pred CCeEEEEcCCCchhHHHHHHc-C--CeEEEEeCCHHHHHHHHhcC---CcceEEEccCCCCC--CCCCCcccEEEECCch
Q 043626 52 PRLLLDIGCGSGLSGETLSEN-G--HQWIGLDISQSMLNIALERE---VEGDLLLGDMGQGL--GLRPGVVDGAISISAV 123 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~-g--~~v~gvDis~~ml~~a~~~~---~~~~~~~~D~~~~~--~~~~~~fD~Vis~~~l 123 (291)
+.+|||+|||+|.++..|++. + ..|+|+|+|+.|++.+.++. .++.++.+|+.... ....++||+|++..+.
T Consensus 74 ~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~~ 153 (227)
T 1g8a_A 74 GKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVAQ 153 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCCS
T ss_pred CCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCCC
Confidence 679999999999999999976 3 79999999999988887654 45789999986521 2224689999987542
Q ss_pred hhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc
Q 043626 124 QWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 162 (291)
Q Consensus 124 ~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~ 162 (291)
.+ ....++.+++++|+|||.+++.+.
T Consensus 154 ~~-------------~~~~~l~~~~~~LkpgG~l~~~~~ 179 (227)
T 1g8a_A 154 PT-------------QAKILIDNAEVYLKRGGYGMIAVK 179 (227)
T ss_dssp TT-------------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred Hh-------------HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 11 134569999999999999999753
No 149
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.50 E-value=4.2e-14 Score=128.89 Aligned_cols=108 Identities=19% Similarity=0.185 Sum_probs=89.5
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCC---eEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGH---QWIGLDISQSMLNIALERE-----VEGDLLLGDMGQG 106 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~---~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~ 106 (291)
.+...+++.+.+.+ +.+|||||||+|.++..+++.+. .|+|+|+|+.+++.|+++. .++.++.+|+.+.
T Consensus 62 ~~~~~l~~~l~~~~---~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~ 138 (317)
T 1dl5_A 62 SLMALFMEWVGLDK---GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG 138 (317)
T ss_dssp HHHHHHHHHTTCCT---TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred HHHHHHHHhcCCCC---cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhc
Confidence 56777888887766 77999999999999999998754 4999999999999998864 3478999998543
Q ss_pred CCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC
Q 043626 107 LGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP 163 (291)
Q Consensus 107 ~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~ 163 (291)
+...++||+|++..+++|+. ..+.++|+|||++++.+.+
T Consensus 139 -~~~~~~fD~Iv~~~~~~~~~-----------------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 139 -VPEFSPYDVIFVTVGVDEVP-----------------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp -CGGGCCEEEEEECSBBSCCC-----------------HHHHHHEEEEEEEEEEBCB
T ss_pred -cccCCCeEEEEEcCCHHHHH-----------------HHHHHhcCCCcEEEEEECC
Confidence 33457899999999998873 3578899999999999754
No 150
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.50 E-value=1.4e-13 Score=127.94 Aligned_cols=134 Identities=19% Similarity=0.194 Sum_probs=101.3
Q ss_pred HHHHHHHhC-CCCCCCCCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCc
Q 043626 37 SERALELLA-LPDDGVPRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGV 113 (291)
Q Consensus 37 ~~~~lelL~-~~~~~~~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~ 113 (291)
...+++.+. ++. ..+|||||||+|..+..+++.+ ..++++|+ +.|++.|++. ..+.++.+|+.+ +++.
T Consensus 197 ~~~l~~~~~~~~~---~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~--~~~~-- 267 (372)
T 1fp1_D 197 MKRMLEIYTGFEG---ISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-SGIEHVGGDMFA--SVPQ-- 267 (372)
T ss_dssp HHHHHHHCCTTTT---CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT--CCCC--
T ss_pred HHHHHHHhhccCC---CCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-CCCEEEeCCccc--CCCC--
Confidence 455666664 443 6799999999999999999875 68899999 9999888763 568999999965 4433
Q ss_pred ccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE--cCCCh------------------------H
Q 043626 114 VDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI--YPESV------------------------A 167 (291)
Q Consensus 114 fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~--~~~~~------------------------~ 167 (291)
||+|++..++||+.+ .....+|++++++|+|||++++.. .+... .
T Consensus 268 ~D~v~~~~~lh~~~d---------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 338 (372)
T 1fp1_D 268 GDAMILKAVCHNWSD---------EKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRER 338 (372)
T ss_dssp EEEEEEESSGGGSCH---------HHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEecccccCCH---------HHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccC
Confidence 999999999999865 224589999999999999999862 22110 0
Q ss_pred HHHHHHHHHHHcCCCCcEEEe
Q 043626 168 QRELILGAAMRAGFAGGVVVD 188 (291)
Q Consensus 168 ~~~~i~~~~~~aGF~~~~~~~ 188 (291)
..+.+..++.++||....+..
T Consensus 339 t~~e~~~ll~~aGf~~~~~~~ 359 (372)
T 1fp1_D 339 TEKQYEKLSKLSGFSKFQVAC 359 (372)
T ss_dssp EHHHHHHHHHHTTCSEEEEEE
T ss_pred CHHHHHHHHHHCCCceEEEEE
Confidence 234667888999998633333
No 151
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.50 E-value=8.2e-14 Score=124.76 Aligned_cols=115 Identities=14% Similarity=0.096 Sum_probs=92.8
Q ss_pred CCeEEEEcCCCchhHHHHHHcCC-eEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCCCCCcccEEEECCchh
Q 043626 52 PRLLLDIGCGSGLSGETLSENGH-QWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGLRPGVVDGAISISAVQ 124 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~-~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~ 124 (291)
+.+|||+|||+|.++..++..+. +|+|+|+|+.|++.|+++.. .+.++++|+.+..+ .++||+|+++....
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~--~~~fD~Vi~~~p~~ 203 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--ENIADRILMGYVVR 203 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--CSCEEEEEECCCSS
T ss_pred CCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--cCCccEEEECCchh
Confidence 56999999999999999999886 69999999999999988642 26799999855433 78999999864422
Q ss_pred hhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC----ChHHHHHHHHHHHHcCCCC
Q 043626 125 WLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE----SVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 125 ~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~----~~~~~~~i~~~~~~aGF~~ 183 (291)
...++..+.++|+|||.+++..... .....+.+...+.++||..
T Consensus 204 ---------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~ 251 (278)
T 2frn_A 204 ---------------THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDV 251 (278)
T ss_dssp ---------------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEE
T ss_pred ---------------HHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCee
Confidence 2467889999999999999865432 2345677888999999976
No 152
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.50 E-value=1.2e-13 Score=129.06 Aligned_cols=117 Identities=15% Similarity=0.169 Sum_probs=89.3
Q ss_pred HHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCC--------cceEEEccCCCC
Q 043626 37 SERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALEREV--------EGDLLLGDMGQG 106 (291)
Q Consensus 37 ~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~--------~~~~~~~D~~~~ 106 (291)
++.+++.+.... +.+|||+|||+|.++..++.. +..|+|+|+|+.|++.|+++.. .+.++.+|+.+
T Consensus 211 ~~~ll~~l~~~~---~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~- 286 (375)
T 4dcm_A 211 ARFFMQHLPENL---EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS- 286 (375)
T ss_dssp HHHHHHTCCCSC---CSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-
T ss_pred HHHHHHhCcccC---CCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-
Confidence 345577766554 579999999999999999998 5899999999999999988653 26779999865
Q ss_pred CCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 043626 107 LGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE 164 (291)
Q Consensus 107 ~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~ 164 (291)
++..++||+|+++..+++.... +......+|..+.++|+|||.+++.....
T Consensus 287 -~~~~~~fD~Ii~nppfh~~~~~------~~~~~~~~l~~~~~~LkpgG~l~iv~n~~ 337 (375)
T 4dcm_A 287 -GVEPFRFNAVLCNPPFHQQHAL------TDNVAWEMFHHARRCLKINGELYIVANRH 337 (375)
T ss_dssp -TCCTTCEEEEEECCCC-------------CCHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred -cCCCCCeeEEEECCCcccCccc------CHHHHHHHHHHHHHhCCCCcEEEEEEECC
Confidence 4557899999999988763221 11113478999999999999999976543
No 153
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.49 E-value=3.1e-14 Score=131.63 Aligned_cols=98 Identities=20% Similarity=0.229 Sum_probs=80.6
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCCCCCcccEEEECCchh
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGLRPGVVDGAISISAVQ 124 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~ 124 (291)
+.+|||||||+|.++..+++.| ..|+|+|+|+ |++.|+++.. .+.++.+|+ ..++++.++||+|++..+.+
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKV-EEVELPVEKVDIIISEWMGY 144 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCT-TTCCCSSSCEEEEEECCCBB
T ss_pred CCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcH-HHccCCCCceEEEEEccccc
Confidence 6799999999999999999997 4999999994 9999987642 278999999 44677789999999987655
Q ss_pred hhccccccCCchHHHHHHHHHHHHHhccCCcEEEE
Q 043626 125 WLCNADKASHEPRLRLKAFFGSLYRCLARGARAVF 159 (291)
Q Consensus 125 ~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~ 159 (291)
++.... .+..++..+.++|+|||.+++
T Consensus 145 ~l~~~~--------~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 145 CLFYES--------MLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TBTBTC--------CHHHHHHHHHHHEEEEEEEES
T ss_pred cccCch--------hHHHHHHHHHHhCCCCCEEcc
Confidence 543211 167899999999999999875
No 154
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.49 E-value=5e-14 Score=129.64 Aligned_cols=133 Identities=12% Similarity=0.130 Sum_probs=101.3
Q ss_pred HHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCCC
Q 043626 39 RALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGLR 110 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~~ 110 (291)
.+++.+..... +.+|||||||+|.++..+++. +..++++|+ +.+++.++++.. .+.++.+|+.+..++.
T Consensus 169 ~~l~~~~~~~~--~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 245 (352)
T 3mcz_A 169 DVVSELGVFAR--ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE 245 (352)
T ss_dssp HHHHTCGGGTT--CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT
T ss_pred HHHHhCCCcCC--CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC
Confidence 45555544432 579999999999999999987 479999999 889998887532 3789999986543234
Q ss_pred CCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc--CCC----------------------h
Q 043626 111 PGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY--PES----------------------V 166 (291)
Q Consensus 111 ~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~--~~~----------------------~ 166 (291)
++.||+|++..++||+.+ .....++++++++|+|||++++... +.. .
T Consensus 246 ~~~~D~v~~~~vlh~~~~---------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (352)
T 3mcz_A 246 GGAADVVMLNDCLHYFDA---------REAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGEL 316 (352)
T ss_dssp TCCEEEEEEESCGGGSCH---------HHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCC
T ss_pred CCCccEEEEecccccCCH---------HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCc
Confidence 667999999999999854 2257899999999999999998532 111 1
Q ss_pred HHHHHHHHHHHHcCCCC
Q 043626 167 AQRELILGAAMRAGFAG 183 (291)
Q Consensus 167 ~~~~~i~~~~~~aGF~~ 183 (291)
...+.+..++.++||..
T Consensus 317 ~t~~e~~~ll~~aGf~~ 333 (352)
T 3mcz_A 317 HPTPWIAGVVRDAGLAV 333 (352)
T ss_dssp CCHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHCCCce
Confidence 12456788899999975
No 155
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.49 E-value=4.7e-13 Score=113.20 Aligned_cols=110 Identities=15% Similarity=0.163 Sum_probs=83.8
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhcccc
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNAD 130 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~ 130 (291)
+.+|||+|||+|.++..++..+ ..++|+|+|+.|++.|+++...+.++++|+.+ ++ ++||+|+++.+++|+.+..
T Consensus 52 ~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~-~~---~~~D~v~~~~p~~~~~~~~ 127 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSE-IS---GKYDTWIMNPPFGSVVKHS 127 (200)
T ss_dssp TSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGG-CC---CCEEEEEECCCC-------
T ss_pred CCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHH-CC---CCeeEEEECCCchhccCch
Confidence 6799999999999999999987 47999999999999999988788999999844 43 7999999999999875411
Q ss_pred ccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcC
Q 043626 131 KASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAG 180 (291)
Q Consensus 131 ~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aG 180 (291)
...++..+.++| | .+++...+ .....+...+...|
T Consensus 128 ---------~~~~l~~~~~~~--g-~~~~~~~~---~~~~~~~~~~~~~g 162 (200)
T 1ne2_A 128 ---------DRAFIDKAFETS--M-WIYSIGNA---KARDFLRREFSARG 162 (200)
T ss_dssp ---------CHHHHHHHHHHE--E-EEEEEEEG---GGHHHHHHHHHHHE
T ss_pred ---------hHHHHHHHHHhc--C-cEEEEEcC---chHHHHHHHHHHCC
Confidence 246888899888 4 44444433 33456677777777
No 156
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.49 E-value=3.8e-14 Score=118.00 Aligned_cols=116 Identities=16% Similarity=0.072 Sum_probs=86.6
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGL 107 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~ 107 (291)
.+.+.+++.+..... +.+|||+|||+|.++..++..+ ..++|+|+|+.|++.|+++. ..+.++.+|+.+.+
T Consensus 30 ~~~~~~~~~l~~~~~--~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 107 (187)
T 2fhp_A 30 KVKESIFNMIGPYFD--GGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRAL 107 (187)
T ss_dssp HHHHHHHHHHCSCCS--SCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHH
T ss_pred HHHHHHHHHHHhhcC--CCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHH
Confidence 455666677643222 6799999999999999888886 79999999999999998865 24789999975422
Q ss_pred ---CCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHH--HHhccCCcEEEEEEcCC
Q 043626 108 ---GLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSL--YRCLARGARAVFQIYPE 164 (291)
Q Consensus 108 ---~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l--~~~LkpgG~lv~~~~~~ 164 (291)
++..++||+|+++.++++ .+ ...++..+ .++|+|||.+++.+...
T Consensus 108 ~~~~~~~~~fD~i~~~~~~~~-~~-----------~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 108 EQFYEEKLQFDLVLLDPPYAK-QE-----------IVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHHHHTTCCEEEEEECCCGGG-CC-----------HHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHHHhcCCCCCEEEECCCCCc-hh-----------HHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 223678999999877442 11 34555566 88899999999987543
No 157
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.49 E-value=6.9e-14 Score=120.61 Aligned_cols=108 Identities=20% Similarity=0.198 Sum_probs=86.2
Q ss_pred HHHHHHHHhC--CCCCCCCCeEEEEcCCCchhHHHHHHcCC-------eEEEEeCCHHHHHHHHhcC----------Ccc
Q 043626 36 LSERALELLA--LPDDGVPRLLLDIGCGSGLSGETLSENGH-------QWIGLDISQSMLNIALERE----------VEG 96 (291)
Q Consensus 36 ~~~~~lelL~--~~~~~~~~~VLDiGcGsG~~~~~L~~~g~-------~v~gvDis~~ml~~a~~~~----------~~~ 96 (291)
+...+++.+. +.+ +.+|||||||+|.++..+++.+. .|+++|+++.+++.|+++. ..+
T Consensus 66 ~~~~~~~~l~~~~~~---~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v 142 (227)
T 2pbf_A 66 MHALSLKRLINVLKP---GSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNF 142 (227)
T ss_dssp HHHHHHHHHTTTSCT---TCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTE
T ss_pred HHHHHHHHHHhhCCC---CCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCE
Confidence 4456667663 443 67999999999999999998754 9999999999999998863 357
Q ss_pred eEEEccCCCCCC---CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC
Q 043626 97 DLLLGDMGQGLG---LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP 163 (291)
Q Consensus 97 ~~~~~D~~~~~~---~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~ 163 (291)
.++.+|+....+ +..++||+|++..+++++ +..+.++|+|||++++.+.+
T Consensus 143 ~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~-----------------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 143 KIIHKNIYQVNEEEKKELGLFDAIHVGASASEL-----------------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp EEEECCGGGCCHHHHHHHCCEEEEEECSBBSSC-----------------CHHHHHHEEEEEEEEEEEEE
T ss_pred EEEECChHhcccccCccCCCcCEEEECCchHHH-----------------HHHHHHhcCCCcEEEEEEcc
Confidence 889999854321 345789999999888765 35688999999999998865
No 158
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.49 E-value=2.1e-13 Score=126.62 Aligned_cols=134 Identities=18% Similarity=0.226 Sum_probs=101.6
Q ss_pred HHHHHHHHhC-CCCCCCCCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCC
Q 043626 36 LSERALELLA-LPDDGVPRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPG 112 (291)
Q Consensus 36 ~~~~~lelL~-~~~~~~~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~ 112 (291)
....+++.+. +.. ..+|||||||+|.++..|++.. ..++++|+ +.+++.|++. ..+.++.+|+.+ +++.+
T Consensus 188 ~~~~~~~~~~~~~~---~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~D~~~--~~p~~ 260 (364)
T 3p9c_A 188 ITKKLLELYHGFEG---LGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-PGVTHVGGDMFK--EVPSG 260 (364)
T ss_dssp HHHHHHHHCCTTTT---CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT--CCCCC
T ss_pred HHHHHHHhcccccC---CCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-CCeEEEeCCcCC--CCCCC
Confidence 3455666665 443 6799999999999999999863 68999999 8898887654 568999999965 44444
Q ss_pred cccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc--CCCh------------------------
Q 043626 113 VVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY--PESV------------------------ 166 (291)
Q Consensus 113 ~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~--~~~~------------------------ 166 (291)
|+|++.+++|++++ .....+|++++++|+|||++++... +...
T Consensus 261 --D~v~~~~vlh~~~d---------~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~ 329 (364)
T 3p9c_A 261 --DTILMKWILHDWSD---------QHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGR 329 (364)
T ss_dssp --SEEEEESCGGGSCH---------HHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCC
T ss_pred --CEEEehHHhccCCH---------HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCc
Confidence 99999999998854 2367899999999999999998532 2110
Q ss_pred -HHHHHHHHHHHHcCCCCcEEE
Q 043626 167 -AQRELILGAAMRAGFAGGVVV 187 (291)
Q Consensus 167 -~~~~~i~~~~~~aGF~~~~~~ 187 (291)
...+.+..++.++||+...+.
T Consensus 330 ~rt~~e~~~ll~~AGF~~v~~~ 351 (364)
T 3p9c_A 330 ERYEREFQALARGAGFTGVKST 351 (364)
T ss_dssp CCBHHHHHHHHHHTTCCEEEEE
T ss_pred cCCHHHHHHHHHHCCCceEEEE
Confidence 013457788999999873333
No 159
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.49 E-value=5.9e-13 Score=118.73 Aligned_cols=139 Identities=17% Similarity=0.125 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEEcCCC---chhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCCc-----ceEEEcc
Q 043626 33 QAKLSERALELLALPDDGVPRLLLDIGCGS---GLSGETLSEN--GHQWIGLDISQSMLNIALEREVE-----GDLLLGD 102 (291)
Q Consensus 33 q~~~~~~~lelL~~~~~~~~~~VLDiGcGs---G~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~~-----~~~~~~D 102 (291)
......+++..|..... ...|||||||+ |+....+... +..|++||+|+.||+.|+.+... +.++++|
T Consensus 62 nr~fl~rav~~l~~~~g--~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD 139 (277)
T 3giw_A 62 NRDWMNRAVAHLAKEAG--IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEAD 139 (277)
T ss_dssp HHHHHHHHHHHHHHTSC--CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECC
T ss_pred HHHHHHHHHHHhccccC--CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEec
Confidence 34566677777753321 46899999997 3444444332 58999999999999999987643 7899999
Q ss_pred CCCCC-----CCCCCccc-----EEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC--hHHHH
Q 043626 103 MGQGL-----GLRPGVVD-----GAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES--VAQRE 170 (291)
Q Consensus 103 ~~~~~-----~~~~~~fD-----~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~--~~~~~ 170 (291)
+.+.- +...++|| .|+++.+|||+.+.+. ...++..+++.|+|||+|++++.... +...+
T Consensus 140 ~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~--------p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~ 211 (277)
T 3giw_A 140 MLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDD--------AVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVG 211 (277)
T ss_dssp TTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGC--------HHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHH
T ss_pred ccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhh--------HHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHH
Confidence 95521 11124455 6899999999976321 35789999999999999999876533 34556
Q ss_pred HHHHHHHHcCC
Q 043626 171 LILGAAMRAGF 181 (291)
Q Consensus 171 ~i~~~~~~aGF 181 (291)
.+.......|-
T Consensus 212 ~~~~~~~~~g~ 222 (277)
T 3giw_A 212 RVAREYAARNM 222 (277)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHhcCC
Confidence 66666665553
No 160
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.49 E-value=2.1e-13 Score=125.85 Aligned_cols=135 Identities=19% Similarity=0.149 Sum_probs=102.3
Q ss_pred HHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCC
Q 043626 38 ERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGL 109 (291)
Q Consensus 38 ~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~ 109 (291)
..+++.+.+.+ +.+|||||||+|.++..+++.+ ..++++|+ +.+++.|+++.. .+.++.+|+.+.+|
T Consensus 173 ~~l~~~~~~~~---~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~- 247 (360)
T 1tw3_A 173 DAPAAAYDWTN---VRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLP- 247 (360)
T ss_dssp HHHHHHSCCTT---CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCS-
T ss_pred HHHHHhCCCcc---CcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCC-
Confidence 34566666554 6799999999999999999874 68999999 999999987641 47899999865443
Q ss_pred CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC---CC---h-----------------
Q 043626 110 RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP---ES---V----------------- 166 (291)
Q Consensus 110 ~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~---~~---~----------------- 166 (291)
..||+|++..++|++.+ .....++++++++|+|||++++.... .. .
T Consensus 248 --~~~D~v~~~~vl~~~~~---------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (360)
T 1tw3_A 248 --RKADAIILSFVLLNWPD---------HDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGAL 316 (360)
T ss_dssp --SCEEEEEEESCGGGSCH---------HHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCC
T ss_pred --CCccEEEEcccccCCCH---------HHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcC
Confidence 34999999999998854 22468999999999999999986432 11 0
Q ss_pred HHHHHHHHHHHHcCCCCcEEEe
Q 043626 167 AQRELILGAAMRAGFAGGVVVD 188 (291)
Q Consensus 167 ~~~~~i~~~~~~aGF~~~~~~~ 188 (291)
...+.+..++.++||....+..
T Consensus 317 ~t~~e~~~ll~~aGf~~~~~~~ 338 (360)
T 1tw3_A 317 RTREKWDGLAASAGLVVEEVRQ 338 (360)
T ss_dssp CBHHHHHHHHHHTTEEEEEEEE
T ss_pred CCHHHHHHHHHHCCCeEEEEEe
Confidence 1245677889999998633333
No 161
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.49 E-value=1.3e-13 Score=123.87 Aligned_cols=123 Identities=22% Similarity=0.236 Sum_probs=91.9
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc-CCeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN-GHQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGL 107 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~ 107 (291)
.+.+.+++.+.... +.+|||||||+|.++..++.. +..|+|+|+|+.+++.|+++.. .+.++++|+...+
T Consensus 110 ~lv~~~l~~~~~~~---~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~ 186 (284)
T 1nv8_A 110 ELVELALELIRKYG---IKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF 186 (284)
T ss_dssp HHHHHHHHHHHHHT---CCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG
T ss_pred HHHHHHHHHhcccC---CCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc
Confidence 45566666654333 569999999999999999988 7899999999999999998742 2789999986533
Q ss_pred CCCCCcc---cEEEECCchhhhc---cccccCCchHHHHH------HHHHHHH-HhccCCcEEEEEEcCC
Q 043626 108 GLRPGVV---DGAISISAVQWLC---NADKASHEPRLRLK------AFFGSLY-RCLARGARAVFQIYPE 164 (291)
Q Consensus 108 ~~~~~~f---D~Vis~~~l~~l~---~~~~~~~~p~~~l~------~~l~~l~-~~LkpgG~lv~~~~~~ 164 (291)
+++| |+|+|+....... ..+.. ++|...+. .++..+. +.|+|||.+++.+...
T Consensus 187 ---~~~f~~~D~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~ 252 (284)
T 1nv8_A 187 ---KEKFASIEMILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGED 252 (284)
T ss_dssp ---GGGTTTCCEEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTT
T ss_pred ---ccccCCCCEEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECch
Confidence 2578 9999984332111 11222 56665543 7899999 9999999999987544
No 162
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.49 E-value=8.4e-14 Score=121.81 Aligned_cols=96 Identities=19% Similarity=0.080 Sum_probs=77.7
Q ss_pred CCeEEEEcCCCchhHHHHHHc------CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC--CCCCC-CcccEEEECCc
Q 043626 52 PRLLLDIGCGSGLSGETLSEN------GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG--LGLRP-GVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~------g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~--~~~~~-~~fD~Vis~~~ 122 (291)
+.+|||||||+|.++..|++. +.+|+|||+|+.|++.|+.....+.++++|+.+. +++.. .+||+|++..+
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~ 161 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDNA 161 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECCc
Confidence 569999999999999999986 5899999999999998875445689999998653 34333 47999998654
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHH-hccCCcEEEEEE
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYR-CLARGARAVFQI 161 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~-~LkpgG~lv~~~ 161 (291)
|. + +..+|.++++ +|+|||++++..
T Consensus 162 --~~-~-----------~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 162 --HA-N-----------TFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp --CS-S-----------HHHHHHHHHHHTCCTTCEEEECS
T ss_pred --hH-h-----------HHHHHHHHHHhhCCCCCEEEEEe
Confidence 21 2 5678999997 999999999963
No 163
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.48 E-value=9.2e-14 Score=124.55 Aligned_cols=142 Identities=13% Similarity=0.105 Sum_probs=89.3
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC-C------cceEE--EccCCCCCCCCCCcccEEEECCc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE-V------EGDLL--LGDMGQGLGLRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~-~------~~~~~--~~D~~~~~~~~~~~fD~Vis~~~ 122 (291)
+.+|||||||+|.++..+++. ..|+|||+|+ |+..+.++. . ++.++ ++|+.. ++ +++||+|+|..+
T Consensus 83 g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~-l~--~~~fD~Vvsd~~ 157 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTK-ME--PFQADTVLCDIG 157 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGG-CC--CCCCSEEEECCC
T ss_pred CCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhh-CC--CCCcCEEEECCC
Confidence 679999999999999999998 7999999999 754443322 1 46788 888843 44 689999999876
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHHhccCCc--EEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeCCCCCCCCcEEE
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYRCLARGA--RAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFL 200 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG--~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~p~~~~~~~~~l 200 (291)
++..+.. .+... ...+|..+.++|+||| .+++.++.........+...+.+ .|....+ . |...+....-+
T Consensus 158 -~~~~~~~---~d~~~-~l~~L~~~~r~LkpGG~~~~v~~~~~~~~~~~~~~l~~l~~-~f~~v~v-~-P~~sR~~s~E~ 229 (276)
T 2wa2_A 158 -ESNPTAA---VEASR-TLTVLNVISRWLEYNQGCGFCVKVLNPYSCDVLEALMKMQA-RFGGGLI-R-VPLSRNSTHEM 229 (276)
T ss_dssp -CCCSCHH---HHHHH-HHHHHHHHHHHHHHSTTCEEEEEESCCCSHHHHHHHHHHHH-HHCCEEE-C-CTTSCTTCCCE
T ss_pred -cCCCchh---hhHHH-HHHHHHHHHHHhccCCCcEEEEEeCCCCchhHHHHHHHHHH-HcCCEEE-E-cCCCCCcchhe
Confidence 4322200 00011 1137899999999999 99997664222222223333333 3665333 3 55554433333
Q ss_pred EEeeCC
Q 043626 201 VLTCGP 206 (291)
Q Consensus 201 ~l~~g~ 206 (291)
++..+.
T Consensus 230 y~v~~~ 235 (276)
T 2wa2_A 230 YFVSGI 235 (276)
T ss_dssp EEESSC
T ss_pred EEeccc
Confidence 344444
No 164
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.48 E-value=1e-13 Score=120.40 Aligned_cols=125 Identities=17% Similarity=0.202 Sum_probs=82.9
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCC-HHHHHHH---HhcC-----CcceEEEccCCCCCCCC-CCcccEEEE
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDIS-QSMLNIA---LERE-----VEGDLLLGDMGQGLGLR-PGVVDGAIS 119 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis-~~ml~~a---~~~~-----~~~~~~~~D~~~~~~~~-~~~fD~Vis 119 (291)
+.+|||||||+|.++..|+.. +..|+|||+| +.|++.| +++. .++.++++|+. .+|.. .+.+|.|++
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~-~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAE-SLPFELKNIADSISI 103 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTT-BCCGGGTTCEEEEEE
T ss_pred CCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHH-HhhhhccCeEEEEEE
Confidence 569999999999999999954 5789999999 7888877 5432 35789999984 44421 245555555
Q ss_pred CCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc-CC---------------ChHHH--HHHHHHHHHcCC
Q 043626 120 ISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY-PE---------------SVAQR--ELILGAAMRAGF 181 (291)
Q Consensus 120 ~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~-~~---------------~~~~~--~~i~~~~~~aGF 181 (291)
++...+... ........+|.+++++|||||++++.+. .. ..... +.+...+.++||
T Consensus 104 ~~~~~~~~~------~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf 177 (225)
T 3p2e_A 104 LFPWGTLLE------YVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGF 177 (225)
T ss_dssp ESCCHHHHH------HHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTC
T ss_pred eCCCcHHhh------hhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCC
Confidence 543322100 0000024689999999999999999221 11 01111 137788899999
Q ss_pred CC
Q 043626 182 AG 183 (291)
Q Consensus 182 ~~ 183 (291)
..
T Consensus 178 ~v 179 (225)
T 3p2e_A 178 RI 179 (225)
T ss_dssp EE
T ss_pred Ce
Confidence 75
No 165
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.48 E-value=2.1e-14 Score=119.12 Aligned_cols=104 Identities=13% Similarity=0.059 Sum_probs=85.3
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC-cceEEEccCCCCCCC---CCCcccEEEECCchhhh-
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV-EGDLLLGDMGQGLGL---RPGVVDGAISISAVQWL- 126 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~-~~~~~~~D~~~~~~~---~~~~fD~Vis~~~l~~l- 126 (291)
+.+|||||||+ +++|+|+.|++.|+++.. .+.++++|+. .+++ ++++||+|+|+.++||+
T Consensus 13 g~~vL~~~~g~--------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~-~~~~~~~~~~~fD~V~~~~~l~~~~ 77 (176)
T 2ld4_A 13 GQFVAVVWDKS--------------SPVEALKGLVDKLQALTGNEGRVSVENIK-QLLQSAHKESSFDIILSGLVPGSTT 77 (176)
T ss_dssp TSEEEEEECTT--------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGG-GGGGGCCCSSCEEEEEECCSTTCCC
T ss_pred CCEEEEecCCc--------------eeeeCCHHHHHHHHHhcccCcEEEEechh-cCccccCCCCCEeEEEECChhhhcc
Confidence 78999999996 249999999999998864 4889999984 4565 78899999999999998
Q ss_pred ccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC-------ChHHHHHHHHHHHHcCC
Q 043626 127 CNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE-------SVAQRELILGAAMRAGF 181 (291)
Q Consensus 127 ~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~-------~~~~~~~i~~~~~~aGF 181 (291)
.+ ...++++++++|||||++++..... .....+.+...+.++||
T Consensus 78 ~~-----------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 78 LH-----------SAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp CC-----------CHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred cC-----------HHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 65 5689999999999999999953211 11135778899999999
No 166
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.48 E-value=1.6e-15 Score=132.21 Aligned_cols=96 Identities=17% Similarity=0.123 Sum_probs=80.2
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCCCCCCCcccEEEECCchhh
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGLGLRPGVVDGAISISAVQW 125 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~ 125 (291)
+.+|||+|||+|.++..++..+..|+|+|+|+.|++.|+++. ..+.++++|+.+ ++ ..++||+|+++.+++|
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~-~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLL-LA-SFLKADVVFLSPPWGG 156 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH-HG-GGCCCSEEEECCCCSS
T ss_pred CCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHH-hc-ccCCCCEEEECCCcCC
Confidence 679999999999999999999999999999999999998875 357899999844 33 4679999999999998
Q ss_pred hccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 126 LCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 126 l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+.+. ...+..++++|+|||.+++.
T Consensus 157 ~~~~-----------~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 157 PDYA-----------TAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp GGGG-----------GSSSBCTTTSCSSCHHHHHH
T ss_pred cchh-----------hhHHHHHHhhcCCcceeHHH
Confidence 7652 23455788889999987664
No 167
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.48 E-value=1.1e-13 Score=123.88 Aligned_cols=100 Identities=11% Similarity=0.059 Sum_probs=80.3
Q ss_pred CCeEEEEcCCCch----hHHHHHHc------CCeEEEEeCCHHHHHHHHhcC----------------------------
Q 043626 52 PRLLLDIGCGSGL----SGETLSEN------GHQWIGLDISQSMLNIALERE---------------------------- 93 (291)
Q Consensus 52 ~~~VLDiGcGsG~----~~~~L~~~------g~~v~gvDis~~ml~~a~~~~---------------------------- 93 (291)
+.+|||+|||||. ++..|++. +..|+|+|||+.||+.|++..
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 5699999999998 55556654 358999999999999998853
Q ss_pred --------CcceEEEccCCCCCCCC-CCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 94 --------VEGDLLLGDMGQGLGLR-PGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 94 --------~~~~~~~~D~~~~~~~~-~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
..+.|.++|+.+ .+++ .+.||+|+|..++.|+.+ .....++..++++|+|||.+++..
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~-~~~~~~~~fDlI~crnvliyf~~---------~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLE-KQYNVPGPFDAIFCRNVMIYFDK---------TTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEECHHHHTTEEEEECCTTC-SSCCCCCCEEEEEECSSGGGSCH---------HHHHHHHHHHGGGEEEEEEEEECT
T ss_pred eeechhhcccCeEEecccCC-CCCCcCCCeeEEEECCchHhCCH---------HHHHHHHHHHHHHhCCCcEEEEEe
Confidence 136788899855 3454 578999999999999843 225789999999999999999843
No 168
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.48 E-value=2.8e-14 Score=123.02 Aligned_cols=99 Identities=14% Similarity=0.127 Sum_probs=79.2
Q ss_pred CCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCCC-----CCcccEE
Q 043626 52 PRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGLR-----PGVVDGA 117 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~~-----~~~fD~V 117 (291)
+.+|||||||+|.++..+++. +.+|+++|+|+.|++.|+++.. .+.++++|+.+.++.. .++||+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 569999999999999999984 5899999999999999988642 3788999974433322 2789999
Q ss_pred EECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc
Q 043626 118 ISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 162 (291)
Q Consensus 118 is~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~ 162 (291)
++....++..+ ...++..+ ++|+|||++++...
T Consensus 139 ~~d~~~~~~~~-----------~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 139 FLDHWKDRYLP-----------DTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp EECSCGGGHHH-----------HHHHHHHT-TCCCTTCEEEESCC
T ss_pred EEcCCcccchH-----------HHHHHHhc-cccCCCeEEEEeCC
Confidence 99877766533 44677777 99999999998643
No 169
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.48 E-value=3.3e-13 Score=124.38 Aligned_cols=131 Identities=15% Similarity=0.044 Sum_probs=97.9
Q ss_pred HHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCCC
Q 043626 37 SERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGLG 108 (291)
Q Consensus 37 ~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~~ 108 (291)
...+++.+.++. ..+|||||||+|..+..+++.. ..++++|+ +.++. +++. ..+.++.+|+.+ +
T Consensus 173 ~~~~~~~~~~~~---~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~--~ 244 (348)
T 3lst_A 173 HLILARAGDFPA---TGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLR--E 244 (348)
T ss_dssp HHHHHHHSCCCS---SEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTT--C
T ss_pred HHHHHHhCCccC---CceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCC--C
Confidence 446677776665 6799999999999999999864 68999999 44544 2221 237899999853 3
Q ss_pred CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc--CCC--------------------h
Q 043626 109 LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY--PES--------------------V 166 (291)
Q Consensus 109 ~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~--~~~--------------------~ 166 (291)
++ +||+|++..++||+++ .....+|++++++|+|||++++... +.. .
T Consensus 245 ~p--~~D~v~~~~vlh~~~d---------~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~ 313 (348)
T 3lst_A 245 VP--HADVHVLKRILHNWGD---------EDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQE 313 (348)
T ss_dssp CC--CCSEEEEESCGGGSCH---------HHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCC
T ss_pred CC--CCcEEEEehhccCCCH---------HHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcC
Confidence 33 8999999999999865 2246899999999999999998542 111 0
Q ss_pred HHHHHHHHHHHHcCCCCcEE
Q 043626 167 AQRELILGAAMRAGFAGGVV 186 (291)
Q Consensus 167 ~~~~~i~~~~~~aGF~~~~~ 186 (291)
...+.+..++.++||....+
T Consensus 314 ~t~~e~~~ll~~aGf~~~~~ 333 (348)
T 3lst_A 314 RTAAELEPLFTAAGLRLDRV 333 (348)
T ss_dssp CBHHHHHHHHHHTTEEEEEE
T ss_pred CCHHHHHHHHHHCCCceEEE
Confidence 13557788999999986333
No 170
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.47 E-value=1e-13 Score=120.51 Aligned_cols=109 Identities=19% Similarity=0.249 Sum_probs=88.4
Q ss_pred HHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCC
Q 043626 34 AKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGL 107 (291)
Q Consensus 34 ~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~ 107 (291)
..+...+++.+.+.+ +.+|||||||+|.++..+++.+ ..|+++|+++.+++.|+++. .++.++.+|+. .
T Consensus 77 ~~~~~~~~~~l~~~~---~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~--~ 151 (235)
T 1jg1_A 77 PHMVAIMLEIANLKP---GMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGS--K 151 (235)
T ss_dssp HHHHHHHHHHHTCCT---TCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG--G
T ss_pred HHHHHHHHHhcCCCC---CCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcc--c
Confidence 356677788887665 6799999999999999999886 89999999999999998864 24788888873 3
Q ss_pred CCCC-CcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 043626 108 GLRP-GVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE 164 (291)
Q Consensus 108 ~~~~-~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~ 164 (291)
+++. +.||+|++..+++++.+ .+.++|+|||++++.+.+.
T Consensus 152 ~~~~~~~fD~Ii~~~~~~~~~~-----------------~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 152 GFPPKAPYDVIIVTAGAPKIPE-----------------PLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp CCGGGCCEEEEEECSBBSSCCH-----------------HHHHTEEEEEEEEEEECSS
T ss_pred CCCCCCCccEEEECCcHHHHHH-----------------HHHHhcCCCcEEEEEEecC
Confidence 3433 35999999999887632 5789999999999998543
No 171
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.47 E-value=1.9e-13 Score=117.83 Aligned_cols=108 Identities=24% Similarity=0.289 Sum_probs=85.9
Q ss_pred HHHHHHHHhC--CCCCCCCCeEEEEcCCCchhHHHHHHc-C--CeEEEEeCCHHHHHHHHhcC----------CcceEEE
Q 043626 36 LSERALELLA--LPDDGVPRLLLDIGCGSGLSGETLSEN-G--HQWIGLDISQSMLNIALERE----------VEGDLLL 100 (291)
Q Consensus 36 ~~~~~lelL~--~~~~~~~~~VLDiGcGsG~~~~~L~~~-g--~~v~gvDis~~ml~~a~~~~----------~~~~~~~ 100 (291)
+...+++++. +.+ +.+|||||||+|..+..+++. + .+|+++|+|+.+++.++++. ..+.++.
T Consensus 63 ~~~~~l~~l~~~~~~---~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 139 (226)
T 1i1n_A 63 MHAYALELLFDQLHE---GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVV 139 (226)
T ss_dssp HHHHHHHHTTTTSCT---TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEE
T ss_pred HHHHHHHHHHhhCCC---CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEE
Confidence 4446677775 333 679999999999999999987 4 69999999999999998753 2578899
Q ss_pred ccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 043626 101 GDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE 164 (291)
Q Consensus 101 ~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~ 164 (291)
+|+.. .+...++||+|++..+++++ +..+.++|+|||++++.+.+.
T Consensus 140 ~d~~~-~~~~~~~fD~i~~~~~~~~~-----------------~~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 140 GDGRM-GYAEEAPYDAIHVGAAAPVV-----------------PQALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp SCGGG-CCGGGCCEEEEEECSBBSSC-----------------CHHHHHTEEEEEEEEEEESCT
T ss_pred CCccc-CcccCCCcCEEEECCchHHH-----------------HHHHHHhcCCCcEEEEEEecC
Confidence 99743 33446789999999887665 347889999999999998654
No 172
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.47 E-value=2.7e-13 Score=122.62 Aligned_cols=123 Identities=13% Similarity=0.086 Sum_probs=91.6
Q ss_pred CCeEEEEcCCCchhHHHHHHc-C-CeEEEEeCCHHHHHHHHhcC---------CcceEEEccCCCCCCCCCCcccEEEEC
Q 043626 52 PRLLLDIGCGSGLSGETLSEN-G-HQWIGLDISQSMLNIALERE---------VEGDLLLGDMGQGLGLRPGVVDGAISI 120 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~-g-~~v~gvDis~~ml~~a~~~~---------~~~~~~~~D~~~~~~~~~~~fD~Vis~ 120 (291)
+.+|||||||+|.++..+++. + .++++||+|+.+++.|+++. ..+.++.+|+...++...++||+|++.
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 170 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIID 170 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEc
Confidence 679999999999999999987 3 79999999999999999875 347889998754444446789999986
Q ss_pred CchhhhccccccCCchHHH--HHHHHHHHHHhccCCcEEEEEEcC--CChHHHHHHHHHHHHcCCCC
Q 043626 121 SAVQWLCNADKASHEPRLR--LKAFFGSLYRCLARGARAVFQIYP--ESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 121 ~~l~~l~~~~~~~~~p~~~--l~~~l~~l~~~LkpgG~lv~~~~~--~~~~~~~~i~~~~~~aGF~~ 183 (291)
...+|+. |... ...++..++++|+|||.++++... .+......+...+.+. |..
T Consensus 171 ~~~~~~~--------~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~ 228 (296)
T 1inl_A 171 STDPTAG--------QGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKV-FPI 228 (296)
T ss_dssp C------------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHH-CSE
T ss_pred CCCcccC--------chhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHH-CCc
Confidence 4433221 1111 268999999999999999998653 3455666777777777 654
No 173
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.47 E-value=4.9e-13 Score=117.22 Aligned_cols=124 Identities=17% Similarity=0.143 Sum_probs=88.9
Q ss_pred CCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhc-------------CCcceEEEccCCCCCC--CCCCcc
Q 043626 52 PRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALER-------------EVEGDLLLGDMGQGLG--LRPGVV 114 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~-------------~~~~~~~~~D~~~~~~--~~~~~f 114 (291)
+..|||||||+|.++..++..+ ..|+|||+|+.|++.|+++ ..++.++.+|+...++ +..+++
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~ 129 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQL 129 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCE
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccccc
Confidence 5699999999999999999886 5899999999999988764 2457899999866555 778899
Q ss_pred cEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcC
Q 043626 115 DGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAG 180 (291)
Q Consensus 115 D~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aG 180 (291)
|.|+....-.|.... .+........++..+.++|+|||.+++.+. .....+.+...+...|
T Consensus 130 d~v~~~~p~p~~k~~---~~~~r~~~~~~l~~~~~~LkpgG~l~~~td--~~~~~~~~~~~~~~~~ 190 (246)
T 2vdv_E 130 SKMFFCFPDPHFKQR---KHKARIITNTLLSEYAYVLKEGGVVYTITD--VKDLHEWMVKHLEEHP 190 (246)
T ss_dssp EEEEEESCCCC---------CSSCCCHHHHHHHHHHEEEEEEEEEEES--CHHHHHHHHHHHHHST
T ss_pred CEEEEECCCcccccc---hhHHhhccHHHHHHHHHHcCCCCEEEEEec--cHHHHHHHHHHHHhCc
Confidence 999866433332110 000000014789999999999999999763 2334455555666665
No 174
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.47 E-value=4.1e-13 Score=119.69 Aligned_cols=124 Identities=15% Similarity=0.156 Sum_probs=99.2
Q ss_pred HHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCC
Q 043626 37 SERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGL 107 (291)
Q Consensus 37 ~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~ 107 (291)
...++..+.+.+ +.+|||+|||+|.++..++.. +..++++|+|+.+++.|+++. ..+.++.+|+.+.
T Consensus 101 ~~~i~~~~~~~~---~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 176 (277)
T 1o54_A 101 SSFIAMMLDVKE---GDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG- 176 (277)
T ss_dssp HHHHHHHTTCCT---TCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-
T ss_pred HHHHHHHhCCCC---CCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-
Confidence 346677777765 679999999999999999987 479999999999999998874 2478888898554
Q ss_pred CCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 108 GLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 108 ~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
++.++||+|+++. ++ ...++..+.++|+|||.+++.... ..+...+...+.+.||..
T Consensus 177 -~~~~~~D~V~~~~-----~~-----------~~~~l~~~~~~L~pgG~l~~~~~~--~~~~~~~~~~l~~~gf~~ 233 (277)
T 1o54_A 177 -FDEKDVDALFLDV-----PD-----------PWNYIDKCWEALKGGGRFATVCPT--TNQVQETLKKLQELPFIR 233 (277)
T ss_dssp -CSCCSEEEEEECC-----SC-----------GGGTHHHHHHHEEEEEEEEEEESS--HHHHHHHHHHHHHSSEEE
T ss_pred -ccCCccCEEEECC-----cC-----------HHHHHHHHHHHcCCCCEEEEEeCC--HHHHHHHHHHHHHCCCce
Confidence 4567899999852 22 236788999999999999998742 356777888888899975
No 175
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.47 E-value=3.2e-13 Score=123.82 Aligned_cols=125 Identities=15% Similarity=0.185 Sum_probs=93.7
Q ss_pred HHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc-C--CeEEEEeCCHHHHHHHHhcC----------------Ccc
Q 043626 36 LSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN-G--HQWIGLDISQSMLNIALERE----------------VEG 96 (291)
Q Consensus 36 ~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~-g--~~v~gvDis~~ml~~a~~~~----------------~~~ 96 (291)
....+++.+.+.+ +.+|||+|||+|.++..++.. | ..|+|+|+++.+++.|+++. ..+
T Consensus 93 ~~~~~l~~l~~~~---g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v 169 (336)
T 2b25_A 93 DINMILSMMDINP---GDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNV 169 (336)
T ss_dssp HHHHHHHHHTCCT---TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCE
T ss_pred HHHHHHHhcCCCC---CCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCce
Confidence 3666777887766 779999999999999999987 5 79999999999999998864 257
Q ss_pred eEEEccCCCCC-CCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHH
Q 043626 97 DLLLGDMGQGL-GLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGA 175 (291)
Q Consensus 97 ~~~~~D~~~~~-~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~ 175 (291)
.++.+|+.+.. ++..++||+|++.....| .++..++++|+|||.+++... ...+...+...
T Consensus 170 ~~~~~d~~~~~~~~~~~~fD~V~~~~~~~~----------------~~l~~~~~~LkpgG~lv~~~~--~~~~~~~~~~~ 231 (336)
T 2b25_A 170 DFIHKDISGATEDIKSLTFDAVALDMLNPH----------------VTLPVFYPHLKHGGVCAVYVV--NITQVIELLDG 231 (336)
T ss_dssp EEEESCTTCCC-------EEEEEECSSSTT----------------TTHHHHGGGEEEEEEEEEEES--SHHHHHHHHHH
T ss_pred EEEECChHHcccccCCCCeeEEEECCCCHH----------------HHHHHHHHhcCCCcEEEEEeC--CHHHHHHHHHH
Confidence 89999986643 456678999998643222 368899999999999997763 44566666776
Q ss_pred HHHcCC
Q 043626 176 AMRAGF 181 (291)
Q Consensus 176 ~~~aGF 181 (291)
+...++
T Consensus 232 l~~~~~ 237 (336)
T 2b25_A 232 IRTCEL 237 (336)
T ss_dssp HHHHTC
T ss_pred HHhcCC
Confidence 665443
No 176
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.47 E-value=1.7e-13 Score=122.03 Aligned_cols=102 Identities=12% Similarity=0.021 Sum_probs=73.6
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC-C------cceEE--EccCCCCCCCCCCcccEEEECCc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE-V------EGDLL--LGDMGQGLGLRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~-~------~~~~~--~~D~~~~~~~~~~~fD~Vis~~~ 122 (291)
+.+|||||||+|.++..+++. ..|+|||+++ |+..+.+.. . ++.++ ++|+.. ++ +++||+|+|..+
T Consensus 75 g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~-l~--~~~fD~V~sd~~ 149 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHT-LP--VERTDVIMCDVG 149 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTT-SC--CCCCSEEEECCC
T ss_pred CCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhH-CC--CCCCcEEEEeCc
Confidence 679999999999999999998 7999999998 643332221 1 46788 889843 44 789999999876
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHHhccCCc--EEEEEEcC
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYRCLARGA--RAVFQIYP 163 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG--~lv~~~~~ 163 (291)
++..+.. .+... ...+|..++++|+||| .+++.++.
T Consensus 150 -~~~~~~~---~d~~~-~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 150 -ESSPKWS---VESER-TIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp -CCCSCHH---HHHHH-HHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred -ccCCccc---hhHHH-HHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 4332200 00011 1137899999999999 99997764
No 177
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.46 E-value=2.1e-13 Score=126.01 Aligned_cols=110 Identities=20% Similarity=0.203 Sum_probs=86.5
Q ss_pred HHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCCC
Q 043626 36 LSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGLG 108 (291)
Q Consensus 36 ~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~~ 108 (291)
..+.+++.+...+ +.+|||||||+|.++..+++.+ .+|+|+|+|+ |++.|+++. ..+.++.+|+.+ ++
T Consensus 38 y~~~i~~~l~~~~---~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~-~~ 112 (348)
T 2y1w_A 38 YQRAILQNHTDFK---DKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEE-VS 112 (348)
T ss_dssp HHHHHHHTGGGTT---TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTT-CC
T ss_pred HHHHHHhccccCC---cCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhh-CC
Confidence 3455666665554 6799999999999999999987 5999999996 888887653 347899999854 44
Q ss_pred CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 109 LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 109 ~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+ +++||+|+|..+++|+.+.. +..++..+.++|+|||.+++.
T Consensus 113 ~-~~~~D~Ivs~~~~~~~~~~~---------~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 113 L-PEQVDIIISEPMGYMLFNER---------MLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp C-SSCEEEEEECCCBTTBTTTS---------HHHHHHHGGGGEEEEEEEESC
T ss_pred C-CCceeEEEEeCchhcCChHH---------HHHHHHHHHhhcCCCeEEEEe
Confidence 4 36899999998888775422 456777889999999999864
No 178
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.46 E-value=5.6e-13 Score=121.49 Aligned_cols=146 Identities=12% Similarity=-0.007 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCC
Q 043626 33 QAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALERE-----VEGDLLLGDMG 104 (291)
Q Consensus 33 q~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~ 104 (291)
|...+..+..++...+ +.+|||+|||+|..+..|++. +..|+|+|+|+.+++.++++. .++.++++|+.
T Consensus 103 qd~~s~l~~~~l~~~~---g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~ 179 (315)
T 1ixk_A 103 QEASSMYPPVALDPKP---GEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSL 179 (315)
T ss_dssp CCHHHHHHHHHHCCCT---TCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGG
T ss_pred eCHHHHHHHHHhCCCC---CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChh
Confidence 3444555566777665 679999999999999999975 278999999999999998874 25788888874
Q ss_pred CCCCCCCCcccEEEECCc---hhhh-ccccccC-CchH------HHHHHHHHHHHHhccCCcEEEEEEcCCChH-HHHHH
Q 043626 105 QGLGLRPGVVDGAISISA---VQWL-CNADKAS-HEPR------LRLKAFFGSLYRCLARGARAVFQIYPESVA-QRELI 172 (291)
Q Consensus 105 ~~~~~~~~~fD~Vis~~~---l~~l-~~~~~~~-~~p~------~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~-~~~~i 172 (291)
. ++...++||+|++... +..+ .+++... ..+. .....++..++++|+|||++++.+..-++. ....+
T Consensus 180 ~-~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v 258 (315)
T 1ixk_A 180 H-IGELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVI 258 (315)
T ss_dssp G-GGGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHH
T ss_pred h-cccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHH
Confidence 3 3334578999998532 1111 1111110 0111 112688999999999999999987653332 23344
Q ss_pred HHHHHHcCCC
Q 043626 173 LGAAMRAGFA 182 (291)
Q Consensus 173 ~~~~~~aGF~ 182 (291)
...+.+.||.
T Consensus 259 ~~~l~~~~~~ 268 (315)
T 1ixk_A 259 QWALDNFDVE 268 (315)
T ss_dssp HHHHHHSSEE
T ss_pred HHHHhcCCCE
Confidence 5556667764
No 179
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.45 E-value=2.1e-13 Score=126.05 Aligned_cols=123 Identities=17% Similarity=0.049 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC---CeEEEEeCCHHHHHHHHhcCC-----cceEEEccCC
Q 043626 33 QAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG---HQWIGLDISQSMLNIALEREV-----EGDLLLGDMG 104 (291)
Q Consensus 33 q~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g---~~v~gvDis~~ml~~a~~~~~-----~~~~~~~D~~ 104 (291)
...++..++.++...+ +..|||+|||+|.++..++..+ ..++|+|+|+.|++.|+++.. .+.++++|+.
T Consensus 188 ~~~la~~l~~~~~~~~---~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~ 264 (354)
T 3tma_A 188 TPVLAQALLRLADARP---GMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADAR 264 (354)
T ss_dssp CHHHHHHHHHHTTCCT---TCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGG
T ss_pred CHHHHHHHHHHhCCCC---CCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChh
Confidence 3456777788877765 6799999999999999999865 899999999999999998753 5789999984
Q ss_pred CCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc
Q 043626 105 QGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 162 (291)
Q Consensus 105 ~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~ 162 (291)
.++...+.||+|+++..+.+..... .+-......++..+.++|+|||.+++.+.
T Consensus 265 -~~~~~~~~~D~Ii~npPyg~r~~~~---~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 265 -HLPRFFPEVDRILANPPHGLRLGRK---EGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp -GGGGTCCCCSEEEECCCSCC----C---HHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred -hCccccCCCCEEEECCCCcCccCCc---ccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 4555567799999987654321100 01112247899999999999999999874
No 180
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.45 E-value=6.3e-14 Score=118.27 Aligned_cols=108 Identities=9% Similarity=0.031 Sum_probs=83.3
Q ss_pred HHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCC----cceEEEccCCCCC
Q 043626 34 AKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALEREV----EGDLLLGDMGQGL 107 (291)
Q Consensus 34 ~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~----~~~~~~~D~~~~~ 107 (291)
..+...+...+ ++ +.+|||||||+|.++..++.. +.+|+++|+|+.|++.++++.. ...+...|....
T Consensus 37 d~fY~~~~~~l--~~---~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~- 110 (200)
T 3fzg_A 37 NDFYTYVFGNI--KH---VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD- 110 (200)
T ss_dssp HHHHHHHHHHS--CC---CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-
T ss_pred HHHHHHHHhhc--CC---CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-
Confidence 34455556655 33 669999999999999999776 4799999999999999998763 224555666333
Q ss_pred CCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEE
Q 043626 108 GLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVF 159 (291)
Q Consensus 108 ~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~ 159 (291)
..+++||+|++..++|++.+ .+..+..+++.|+|||.+|-
T Consensus 111 -~~~~~~DvVLa~k~LHlL~~-----------~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 111 -VYKGTYDVVFLLKMLPVLKQ-----------QDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp -HTTSEEEEEEEETCHHHHHH-----------TTCCHHHHHHTCEEEEEEEE
T ss_pred -CCCCCcChhhHhhHHHhhhh-----------hHHHHHHHHHHhCCCCEEEE
Confidence 45789999999999999944 23455589999999998874
No 181
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.45 E-value=8.9e-13 Score=120.39 Aligned_cols=133 Identities=21% Similarity=0.185 Sum_probs=101.8
Q ss_pred HHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCCC
Q 043626 37 SERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGLG 108 (291)
Q Consensus 37 ~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~~ 108 (291)
...+++.+.+. +.+|||||||+|..+..+++. +..++++|+ +.+++.|+++. ..+.++.+|+.+ +
T Consensus 157 ~~~~~~~~~~~----~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~ 229 (334)
T 2ip2_A 157 FHEIPRLLDFR----GRSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ--E 229 (334)
T ss_dssp HHHHHHHSCCT----TCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT--C
T ss_pred HHHHHHhCCCC----CCEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC--C
Confidence 44556655443 269999999999999999987 478999999 99999998874 247899999865 3
Q ss_pred CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc--CC--Ch------------------
Q 043626 109 LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY--PE--SV------------------ 166 (291)
Q Consensus 109 ~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~--~~--~~------------------ 166 (291)
++ +.||+|++..++|++.+ .....++++++++|+|||++++... +. .+
T Consensus 230 ~~-~~~D~v~~~~vl~~~~~---------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (334)
T 2ip2_A 230 VP-SNGDIYLLSRIIGDLDE---------AASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRH 299 (334)
T ss_dssp CC-SSCSEEEEESCGGGCCH---------HHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCC
T ss_pred CC-CCCCEEEEchhccCCCH---------HHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcC
Confidence 33 68999999999998754 2256899999999999999998642 11 10
Q ss_pred HHHHHHHHHHHHcCCCCcEE
Q 043626 167 AQRELILGAAMRAGFAGGVV 186 (291)
Q Consensus 167 ~~~~~i~~~~~~aGF~~~~~ 186 (291)
...+.+..++.++||....+
T Consensus 300 ~t~~e~~~ll~~aGf~~~~~ 319 (334)
T 2ip2_A 300 RTTEEVVDLLGRGGFAVERI 319 (334)
T ss_dssp CBHHHHHHHHHHTTEEEEEE
T ss_pred CCHHHHHHHHHHCCCceeEE
Confidence 12456778889999986333
No 182
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.45 E-value=1.5e-13 Score=119.02 Aligned_cols=112 Identities=15% Similarity=0.060 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcCC-------cceEEEc
Q 043626 32 IQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALEREV-------EGDLLLG 101 (291)
Q Consensus 32 iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~~-------~~~~~~~ 101 (291)
.+..+...++......+ ..+|||||||+|.++..|++. +..++++|+|+.|++.|+++.. .+.++.+
T Consensus 40 ~~~~~l~~l~~~~~~~~---~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g 116 (221)
T 3dr5_A 40 MTGQLLTTLAATTNGNG---STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS 116 (221)
T ss_dssp HHHHHHHHHHHHSCCTT---CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS
T ss_pred HHHHHHHHHHHhhCCCC---CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc
Confidence 34444455554443322 459999999999999999984 5899999999999999988652 4788888
Q ss_pred cCCCCCC-CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 102 DMGQGLG-LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 102 D~~~~~~-~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
|+.+.++ +..++||+|++.....+ ...++..+.++|+|||.+++.
T Consensus 117 da~~~l~~~~~~~fD~V~~d~~~~~--------------~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 117 RPLDVMSRLANDSYQLVFGQVSPMD--------------LKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp CHHHHGGGSCTTCEEEEEECCCTTT--------------HHHHHHHHHHHEEEEEEEEET
T ss_pred CHHHHHHHhcCCCcCeEEEcCcHHH--------------HHHHHHHHHHHcCCCcEEEEe
Confidence 8755443 33689999998654322 457899999999999999984
No 183
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.45 E-value=7.3e-13 Score=118.50 Aligned_cols=124 Identities=15% Similarity=0.047 Sum_probs=93.9
Q ss_pred CCeEEEEcCCCchhHHHHHHc-C-CeEEEEeCCHHHHHHHHhcC---------CcceEEEccCCCCCCCCCCcccEEEEC
Q 043626 52 PRLLLDIGCGSGLSGETLSEN-G-HQWIGLDISQSMLNIALERE---------VEGDLLLGDMGQGLGLRPGVVDGAISI 120 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~-g-~~v~gvDis~~ml~~a~~~~---------~~~~~~~~D~~~~~~~~~~~fD~Vis~ 120 (291)
+.+|||||||+|.++..+++. + .++++||+++.+++.|+++. ..+.++.+|+.+.++...++||+|++.
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d 155 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVD 155 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEEC
Confidence 679999999999999999987 4 79999999999999999865 247889999755444446799999997
Q ss_pred CchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC--CChHHHHHHHHHHHHcCCCC
Q 043626 121 SAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP--ESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 121 ~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~--~~~~~~~~i~~~~~~aGF~~ 183 (291)
...++... .. .-...++..++++|+|||.++++... .+......+...+.+. |..
T Consensus 156 ~~~~~~~~-~~------l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~ 212 (275)
T 1iy9_A 156 STEPVGPA-VN------LFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI-FPI 212 (275)
T ss_dssp CSSCCSCC-CC------CSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT-CSE
T ss_pred CCCCCCcc-hh------hhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHh-CCC
Confidence 55433211 00 00147899999999999999998643 2355666777777766 764
No 184
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.45 E-value=2.3e-13 Score=125.02 Aligned_cols=144 Identities=14% Similarity=-0.006 Sum_probs=94.6
Q ss_pred HHHHHHHHHhC-CCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC-------cceEEEccCCCC
Q 043626 35 KLSERALELLA-LPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV-------EGDLLLGDMGQG 106 (291)
Q Consensus 35 ~~~~~~lelL~-~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~-------~~~~~~~D~~~~ 106 (291)
...+.+.+++. ..+ +.+|||+|||+|.++..++..|..|++||+|+.|++.|+++.. .+.++++|+.+.
T Consensus 139 ~~~~~l~~~~~~~~~---~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~ 215 (332)
T 2igt_A 139 VHWEWLKNAVETADR---PLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKF 215 (332)
T ss_dssp HHHHHHHHHHHHSSS---CCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHH
T ss_pred HHHHHHHHHHHhcCC---CCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHH
Confidence 34444555543 222 5699999999999999999998899999999999999988742 278898887443
Q ss_pred CCC---CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCCh---HHH-HHHHHHHHHc
Q 043626 107 LGL---RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESV---AQR-ELILGAAMRA 179 (291)
Q Consensus 107 ~~~---~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~---~~~-~~i~~~~~~a 179 (291)
++. ..++||+||++....... ......+-...+..++..+.++|+|||.+++....... ... ..+...+.++
T Consensus 216 l~~~~~~~~~fD~Ii~dPP~~~~~-~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~ 294 (332)
T 2igt_A 216 IQREERRGSTYDIILTDPPKFGRG-THGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGA 294 (332)
T ss_dssp HHHHHHHTCCBSEEEECCCSEEEC-TTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTS
T ss_pred HHHHHhcCCCceEEEECCccccCC-chHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHc
Confidence 221 146899999964321110 00000112233678999999999999998876544322 222 2333344466
Q ss_pred CCC
Q 043626 180 GFA 182 (291)
Q Consensus 180 GF~ 182 (291)
|+.
T Consensus 295 g~~ 297 (332)
T 2igt_A 295 GGV 297 (332)
T ss_dssp CSE
T ss_pred CCe
Confidence 664
No 185
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.45 E-value=3.4e-13 Score=127.75 Aligned_cols=111 Identities=12% Similarity=0.089 Sum_probs=85.1
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc-C-CeEEEEeCCHHHHHHH-------HhcC-------CcceE
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN-G-HQWIGLDISQSMLNIA-------LERE-------VEGDL 98 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~-g-~~v~gvDis~~ml~~a-------~~~~-------~~~~~ 98 (291)
.++..+++.+.+.+ +.+|||||||+|.++..++.. + ..|+|||+|+.+++.| +++. .++.+
T Consensus 229 ~~v~~ml~~l~l~~---g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~ 305 (433)
T 1u2z_A 229 NFLSDVYQQCQLKK---GDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEF 305 (433)
T ss_dssp HHHHHHHHHTTCCT---TCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEE
T ss_pred HHHHHHHHhcCCCC---CCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEE
Confidence 45667778887765 789999999999999999986 4 5899999999999888 5542 35678
Q ss_pred EEccCCC-CCCC--CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 99 LLGDMGQ-GLGL--RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 99 ~~~D~~~-~~~~--~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+++|... ..++ ..++||+|+++.++ +..+ +..+|.+++++|+|||++++.
T Consensus 306 i~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d-----------~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 306 SLKKSFVDNNRVAELIPQCDVILVNNFL-FDED-----------LNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp EESSCSTTCHHHHHHGGGCSEEEECCTT-CCHH-----------HHHHHHHHHTTCCTTCEEEES
T ss_pred EEcCccccccccccccCCCCEEEEeCcc-cccc-----------HHHHHHHHHHhCCCCeEEEEe
Confidence 8775322 1122 24789999987665 2222 567889999999999999985
No 186
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.45 E-value=3e-13 Score=117.55 Aligned_cols=131 Identities=16% Similarity=0.095 Sum_probs=98.5
Q ss_pred CCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCCCCC-cccEEEECCc
Q 043626 52 PRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGLRPG-VVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~~~~-~fD~Vis~~~ 122 (291)
+.+|||||||+|.++..++..+ ..|+++|+++.+++.|+++.. .+++.++|..+.++ ++ .||+|+...+
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~--~~~~~D~IviaG~ 93 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFE--ETDQVSVITIAGM 93 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC--GGGCCCEEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcc--cCcCCCEEEEcCC
Confidence 6699999999999999999987 589999999999999998752 37889999755444 34 6999886544
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeCCCCCCCCcEEEEE
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFLVL 202 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~p~~~~~~~~~l~l 202 (291)
-..+ +..++......|+++|+++++-. .....+..++...||.. .-... .....++|-++
T Consensus 94 Gg~~-------------i~~Il~~~~~~L~~~~~lVlq~~----~~~~~vr~~L~~~Gf~i-~~e~l--v~e~~~~Yeii 153 (225)
T 3kr9_A 94 GGRL-------------IARILEEGLGKLANVERLILQPN----NREDDLRIWLQDHGFQI-VAESI--LEEAGKFYEIL 153 (225)
T ss_dssp CHHH-------------HHHHHHHTGGGCTTCCEEEEEES----SCHHHHHHHHHHTTEEE-EEEEE--EEETTEEEEEE
T ss_pred ChHH-------------HHHHHHHHHHHhCCCCEEEEECC----CCHHHHHHHHHHCCCEE-EEEEE--EEECCEEEEEE
Confidence 3322 57889999999999999999864 24567888899999974 11111 12244666555
Q ss_pred ee
Q 043626 203 TC 204 (291)
Q Consensus 203 ~~ 204 (291)
.+
T Consensus 154 ~~ 155 (225)
T 3kr9_A 154 VV 155 (225)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 187
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.44 E-value=2e-13 Score=118.02 Aligned_cols=107 Identities=21% Similarity=0.251 Sum_probs=85.9
Q ss_pred HHHHHHHHHhC--CCCCCCCCeEEEEcCCCchhHHHHHHc-C-------CeEEEEeCCHHHHHHHHhcC----------C
Q 043626 35 KLSERALELLA--LPDDGVPRLLLDIGCGSGLSGETLSEN-G-------HQWIGLDISQSMLNIALERE----------V 94 (291)
Q Consensus 35 ~~~~~~lelL~--~~~~~~~~~VLDiGcGsG~~~~~L~~~-g-------~~v~gvDis~~ml~~a~~~~----------~ 94 (291)
.+...+++.|. +.+ +.+|||||||+|.++..+++. + ..|+++|+++.+++.|+++. .
T Consensus 69 ~~~~~~~~~l~~~~~~---~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 145 (227)
T 1r18_A 69 HMHAFALEYLRDHLKP---GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSG 145 (227)
T ss_dssp HHHHHHHHHTTTTCCT---TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhCCC---CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCC
Confidence 44556677774 433 679999999999999999885 3 49999999999999998763 3
Q ss_pred cceEEEccCCCCCCCCC-CcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC
Q 043626 95 EGDLLLGDMGQGLGLRP-GVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP 163 (291)
Q Consensus 95 ~~~~~~~D~~~~~~~~~-~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~ 163 (291)
.+.++.+|+.. +++. ++||+|++..+++|+. ..+.+.|+|||++++.+.+
T Consensus 146 ~v~~~~~d~~~--~~~~~~~fD~I~~~~~~~~~~-----------------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 146 QLLIVEGDGRK--GYPPNAPYNAIHVGAAAPDTP-----------------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp SEEEEESCGGG--CCGGGCSEEEEEECSCBSSCC-----------------HHHHHTEEEEEEEEEEESC
T ss_pred ceEEEECCccc--CCCcCCCccEEEECCchHHHH-----------------HHHHHHhcCCCEEEEEEec
Confidence 57889999855 3333 7899999999988763 4689999999999999865
No 188
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.44 E-value=4.8e-13 Score=122.33 Aligned_cols=122 Identities=19% Similarity=0.190 Sum_probs=91.8
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCC---------cceEEEccCCCCCCCCCCcccEEEEC
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALEREV---------EGDLLLGDMGQGLGLRPGVVDGAISI 120 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~---------~~~~~~~D~~~~~~~~~~~fD~Vis~ 120 (291)
+.+|||||||+|.++..+++. +.+++++|+|+.+++.|+++.. .++++.+|+.+.++..+++||+|+++
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d 196 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVD 196 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEEC
Confidence 679999999999999999987 4799999999999999998754 36788898744333346789999987
Q ss_pred CchhhhccccccCCchHHHH--HHHHHHHHHhccCCcEEEEEEcC--CChHHHHHHHHHHHHcCCCC
Q 043626 121 SAVQWLCNADKASHEPRLRL--KAFFGSLYRCLARGARAVFQIYP--ESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 121 ~~l~~l~~~~~~~~~p~~~l--~~~l~~l~~~LkpgG~lv~~~~~--~~~~~~~~i~~~~~~aGF~~ 183 (291)
...++ .|...+ ..++..+.++|+|||.++++... ........+.+.+.+. |..
T Consensus 197 ~~~p~---------~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~ 253 (321)
T 2pt6_A 197 SSDPI---------GPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL-FKK 253 (321)
T ss_dssp CCCSS---------SGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTT-CSE
T ss_pred CcCCC---------CcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH-CCC
Confidence 53221 111112 68999999999999999998643 2445566666666665 654
No 189
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.44 E-value=2.5e-13 Score=119.40 Aligned_cols=95 Identities=17% Similarity=0.066 Sum_probs=77.9
Q ss_pred CCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCCC--CCcccEEEEC
Q 043626 52 PRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGLR--PGVVDGAISI 120 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~~--~~~fD~Vis~ 120 (291)
+.+|||||||+|.++..|++. +..|+++|+|+.+++.|+++.. .+.++.+|+.+.++.. .++||+|++.
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d 143 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFID 143 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEEC
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEEC
Confidence 679999999999999999987 6899999999999999988752 4789999975433332 3489999986
Q ss_pred CchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 121 SAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 121 ~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
..... ...++..+.++|+|||++++.
T Consensus 144 ~~~~~--------------~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 144 ADKPN--------------NPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp SCGGG--------------HHHHHHHHHHTCCTTCEEEEE
T ss_pred CchHH--------------HHHHHHHHHHhcCCCeEEEEe
Confidence 54322 457899999999999999986
No 190
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.44 E-value=6.8e-13 Score=122.37 Aligned_cols=117 Identities=13% Similarity=0.120 Sum_probs=93.3
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccc
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNA 129 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~ 129 (291)
..+|||||||+|..+..+++. +.+++++|+ +.|++.|++. ..+.++.+|+.+ +++ .||+|++..++||+.+
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~--~~p--~~D~v~~~~~lh~~~d- 261 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-NNLTYVGGDMFT--SIP--NADAVLLKYILHNWTD- 261 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-TTEEEEECCTTT--CCC--CCSEEEEESCGGGSCH-
T ss_pred CceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-CCcEEEeccccC--CCC--CccEEEeehhhccCCH-
Confidence 579999999999999999987 478999999 9999988764 458999999855 333 3999999999999865
Q ss_pred cccCCchHHHHHHHHHHHHHhccC---CcEEEEEEc--CCCh-----------------------HHHHHHHHHHHHcCC
Q 043626 130 DKASHEPRLRLKAFFGSLYRCLAR---GARAVFQIY--PESV-----------------------AQRELILGAAMRAGF 181 (291)
Q Consensus 130 ~~~~~~p~~~l~~~l~~l~~~Lkp---gG~lv~~~~--~~~~-----------------------~~~~~i~~~~~~aGF 181 (291)
.....+|++++++|+| ||++++... +... ...+.+..++.++||
T Consensus 262 --------~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf 333 (352)
T 1fp2_A 262 --------KDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGF 333 (352)
T ss_dssp --------HHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTC
T ss_pred --------HHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCC
Confidence 2245899999999999 999988632 2211 113567888999999
Q ss_pred CC
Q 043626 182 AG 183 (291)
Q Consensus 182 ~~ 183 (291)
..
T Consensus 334 ~~ 335 (352)
T 1fp2_A 334 QH 335 (352)
T ss_dssp CE
T ss_pred Ce
Confidence 86
No 191
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.44 E-value=2.8e-13 Score=113.81 Aligned_cols=123 Identities=15% Similarity=0.068 Sum_probs=80.4
Q ss_pred CCeEEEEcCCCchhHHHHHHc-C----------CeEEEEeCCHHHHHHHHhcCCcceEE-EccCCCCC-------CCCCC
Q 043626 52 PRLLLDIGCGSGLSGETLSEN-G----------HQWIGLDISQSMLNIALEREVEGDLL-LGDMGQGL-------GLRPG 112 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~-g----------~~v~gvDis~~ml~~a~~~~~~~~~~-~~D~~~~~-------~~~~~ 112 (291)
+.+|||||||+|.++..|++. + ..++|+|+|+.+ ....+.++ .+|+.... .+..+
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PLEGATFLCPADVTDPRTSQRILEVLPGR 96 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CCTTCEEECSCCTTSHHHHHHHHHHSGGG
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc------cCCCCeEEEeccCCCHHHHHHHHHhcCCC
Confidence 679999999999999999987 3 689999999832 12457788 88874321 13346
Q ss_pred cccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 113 VVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 113 ~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
+||+|+|+.++++.................++..++++|+|||.+++.++... ....+...+... |..
T Consensus 97 ~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~--~~~~~~~~l~~~-f~~ 164 (196)
T 2nyu_A 97 RADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGS--QSRRLQRRLTEE-FQN 164 (196)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSG--GGHHHHHHHHHH-EEE
T ss_pred CCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCc--cHHHHHHHHHHH-hcc
Confidence 89999997655432110000000011125789999999999999999876442 233444444443 654
No 192
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.44 E-value=4.2e-13 Score=122.91 Aligned_cols=109 Identities=24% Similarity=0.301 Sum_probs=83.5
Q ss_pred HHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCCC
Q 043626 38 ERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGLR 110 (291)
Q Consensus 38 ~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~~ 110 (291)
..+++.+...+ +.+|||||||+|.++..+++.| .+|+|+|+| .|++.|+++.. .+.++.+|+. .++++
T Consensus 28 ~ai~~~~~~~~---~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~-~~~~~ 102 (328)
T 1g6q_1 28 NAIIQNKDLFK---DKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLE-DVHLP 102 (328)
T ss_dssp HHHHHHHHHHT---TCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTT-TSCCS
T ss_pred HHHHhhHhhcC---CCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchh-hccCC
Confidence 33434444444 6799999999999999999987 599999999 59998887642 3789999984 46666
Q ss_pred CCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEE
Q 043626 111 PGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVF 159 (291)
Q Consensus 111 ~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~ 159 (291)
.++||+|++..+.+++.+.. .+..++..+.++|+|||.++.
T Consensus 103 ~~~~D~Ivs~~~~~~l~~~~--------~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 103 FPKVDIIISEWMGYFLLYES--------MMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp SSCEEEEEECCCBTTBSTTC--------CHHHHHHHHHHHEEEEEEEES
T ss_pred CCcccEEEEeCchhhcccHH--------HHHHHHHHHHhhcCCCeEEEE
Confidence 78999999986655443211 156889999999999999984
No 193
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.44 E-value=1.1e-12 Score=114.14 Aligned_cols=124 Identities=18% Similarity=0.158 Sum_probs=95.1
Q ss_pred HHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCCCCC
Q 043626 37 SERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGLGLR 110 (291)
Q Consensus 37 ~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~~~~ 110 (291)
...+++.+.+.+ +.+|||+|||+|.++..+++.+..++++|+|+.+++.|+++. ..+.++.+|+.+.. +.
T Consensus 80 ~~~~~~~~~~~~---~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~ 155 (248)
T 2yvl_A 80 SFYIALKLNLNK---EKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE-VP 155 (248)
T ss_dssp HHHHHHHTTCCT---TCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC-CC
T ss_pred HHHHHHhcCCCC---CCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc-cC
Confidence 346667776665 679999999999999999988889999999999999998864 34788889985532 24
Q ss_pred CCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 111 PGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 111 ~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
.++||+|++... + ...++..+.++|+|||++++.... ..+...+...+... |..
T Consensus 156 ~~~~D~v~~~~~-----~-----------~~~~l~~~~~~L~~gG~l~~~~~~--~~~~~~~~~~l~~~-f~~ 209 (248)
T 2yvl_A 156 EGIFHAAFVDVR-----E-----------PWHYLEKVHKSLMEGAPVGFLLPT--ANQVIKLLESIENY-FGN 209 (248)
T ss_dssp TTCBSEEEECSS-----C-----------GGGGHHHHHHHBCTTCEEEEEESS--HHHHHHHHHHSTTT-EEE
T ss_pred CCcccEEEECCc-----C-----------HHHHHHHHHHHcCCCCEEEEEeCC--HHHHHHHHHHHHhh-CCc
Confidence 678999998422 2 236788999999999999998843 34666666665554 543
No 194
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.43 E-value=9.7e-14 Score=120.36 Aligned_cols=109 Identities=19% Similarity=0.180 Sum_probs=85.4
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALERE------VEGDLLLGDMGQG 106 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~ 106 (291)
.....+..++...+ +.+|||||||+|.++..+++. +..|+++|+|+.+++.|+++. ..+.++.+|+...
T Consensus 41 ~~~~~l~~~~~~~~---~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 117 (233)
T 2gpy_A 41 LGMESLLHLLKMAA---PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQL 117 (233)
T ss_dssp HHHHHHHHHHHHHC---CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGS
T ss_pred HHHHHHHHHHhccC---CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 33444444444444 679999999999999999987 589999999999999998874 2478888888554
Q ss_pred CCCC--CCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 107 LGLR--PGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 107 ~~~~--~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
++.. +++||+|++..+.+ + ...++..+.++|+|||++++.
T Consensus 118 ~~~~~~~~~fD~I~~~~~~~---~-----------~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 118 GEKLELYPLFDVLFIDAAKG---Q-----------YRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp HHHHTTSCCEEEEEEEGGGS---C-----------HHHHHHHHGGGEEEEEEEEEE
T ss_pred HHhcccCCCccEEEECCCHH---H-----------HHHHHHHHHHHcCCCeEEEEE
Confidence 3433 57899999876543 1 568999999999999999996
No 195
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.43 E-value=2.3e-13 Score=125.38 Aligned_cols=117 Identities=17% Similarity=0.160 Sum_probs=91.4
Q ss_pred HHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcCC----cceEEEccCCCCCCC
Q 043626 36 LSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALEREV----EGDLLLGDMGQGLGL 109 (291)
Q Consensus 36 ~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~~----~~~~~~~D~~~~~~~ 109 (291)
.++.+++.+.... +.+|||||||+|.++..+++.+ ..++|+|+|+.|++.|+++.. .+.++.+|+.. +
T Consensus 184 ~~~~ll~~l~~~~---~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~---~ 257 (343)
T 2pjd_A 184 GSQLLLSTLTPHT---KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFS---E 257 (343)
T ss_dssp HHHHHHHHSCTTC---CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTT---T
T ss_pred HHHHHHHhcCcCC---CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccc---c
Confidence 3556677775444 5699999999999999999886 599999999999999988652 35778888743 3
Q ss_pred CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 043626 110 RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE 164 (291)
Q Consensus 110 ~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~ 164 (291)
.+++||+|+++.++|+... ........++..++++|+|||.+++.....
T Consensus 258 ~~~~fD~Iv~~~~~~~g~~------~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 258 VKGRFDMIISNPPFHDGMQ------TSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp CCSCEEEEEECCCCCSSSH------HHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred ccCCeeEEEECCCcccCcc------CCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 3679999999998876211 112236789999999999999999976543
No 196
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.42 E-value=8.4e-13 Score=115.01 Aligned_cols=132 Identities=16% Similarity=0.096 Sum_probs=98.5
Q ss_pred CCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCCCCCcccEEEECCch
Q 043626 52 PRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGLRPGVVDGAISISAV 123 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~~~~~fD~Vis~~~l 123 (291)
+.+|||||||+|.++..++..+ ..|+|+|+++.+++.|+++.. .+.+.++|..+.++ +.+.||+|+.....
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~-~~~~~D~IviaGmG 100 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFE-EADNIDTITICGMG 100 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC-GGGCCCEEEEEEEC
T ss_pred CCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccc-cccccCEEEEeCCc
Confidence 6799999999999999999987 479999999999999998752 37899999855432 22379998865554
Q ss_pred hhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeCCCCCCCCcEEEEEe
Q 043626 124 QWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFLVLT 203 (291)
Q Consensus 124 ~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~p~~~~~~~~~l~l~ 203 (291)
..+ +..++......|+++|+|+++-.. ....+..++...||.- .-... .....++|-++.
T Consensus 101 g~l-------------I~~IL~~~~~~l~~~~~lIlqp~~----~~~~lr~~L~~~Gf~i-~~E~l--v~e~~~~Yeii~ 160 (230)
T 3lec_A 101 GRL-------------IADILNNDIDKLQHVKTLVLQPNN----REDDLRKWLAANDFEI-VAEDI--LTENDKRYEILV 160 (230)
T ss_dssp HHH-------------HHHHHHHTGGGGTTCCEEEEEESS----CHHHHHHHHHHTTEEE-EEEEE--EEC--CEEEEEE
T ss_pred hHH-------------HHHHHHHHHHHhCcCCEEEEECCC----ChHHHHHHHHHCCCEE-EEEEE--EEECCEEEEEEE
Confidence 433 678899999999999999998742 3667888999999974 11111 122456775555
Q ss_pred e
Q 043626 204 C 204 (291)
Q Consensus 204 ~ 204 (291)
+
T Consensus 161 ~ 161 (230)
T 3lec_A 161 V 161 (230)
T ss_dssp E
T ss_pred E
Confidence 4
No 197
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.42 E-value=1.4e-13 Score=118.50 Aligned_cols=95 Identities=16% Similarity=0.096 Sum_probs=77.2
Q ss_pred CCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCCC-----CCcccEE
Q 043626 52 PRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGLR-----PGVVDGA 117 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~~-----~~~fD~V 117 (291)
+.+|||||||+|.++..|+.. +.+|+++|+|+.+++.|+++.. .+.++++|+.+.++.. .++||+|
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 569999999999999999987 6899999999999999988652 3788998874433211 1789999
Q ss_pred EECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 118 ISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 118 is~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
++...... ...++..+.++|+|||.+++.
T Consensus 145 ~~~~~~~~--------------~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 145 YIDADKAN--------------TDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp EECSCGGG--------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCHHH--------------HHHHHHHHHHhcCCCcEEEEe
Confidence 97654221 567899999999999999985
No 198
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.42 E-value=6.9e-13 Score=118.99 Aligned_cols=121 Identities=18% Similarity=0.153 Sum_probs=89.9
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcC---------------CcceEEEccCCCCCCCCCCccc
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALERE---------------VEGDLLLGDMGQGLGLRPGVVD 115 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~---------------~~~~~~~~D~~~~~~~~~~~fD 115 (291)
+.+|||||||+|.++..+++.+ .++++||+++.+++.|+++. ..+.++.+|+.+.++. .++||
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~fD 154 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGFD 154 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCEE
T ss_pred CCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCee
Confidence 6799999999999999999885 69999999999999999865 2367888886443333 67899
Q ss_pred EEEECCchhhhccccccCCchHHHH--HHHHHHHHHhccCCcEEEEEEcC--CChHHHHHHHHHHHHcCCCC
Q 043626 116 GAISISAVQWLCNADKASHEPRLRL--KAFFGSLYRCLARGARAVFQIYP--ESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 116 ~Vis~~~l~~l~~~~~~~~~p~~~l--~~~l~~l~~~LkpgG~lv~~~~~--~~~~~~~~i~~~~~~aGF~~ 183 (291)
+|++....++- |...+ ..++..++++|+|||.++++... ........+.+.+... |..
T Consensus 155 ~Ii~d~~~~~~---------~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-f~~ 216 (281)
T 1mjf_A 155 VIIADSTDPVG---------PAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKV-FDR 216 (281)
T ss_dssp EEEEECCCCC--------------TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHH-CSE
T ss_pred EEEECCCCCCC---------cchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH-CCc
Confidence 99987553221 11222 68899999999999999997532 2445556666666665 764
No 199
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.41 E-value=1.6e-12 Score=116.77 Aligned_cols=128 Identities=17% Similarity=0.154 Sum_probs=94.4
Q ss_pred HhCCCCCCCCCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcCC---------cceEEEccCCCCCCCCC
Q 043626 43 LLALPDDGVPRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALEREV---------EGDLLLGDMGQGLGLRP 111 (291)
Q Consensus 43 lL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~~---------~~~~~~~D~~~~~~~~~ 111 (291)
++.++. +.+|||||||+|..+..+++.. .+++++|+++.+++.|+++.. .+.++.+|+...++...
T Consensus 73 l~~~~~---~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~ 149 (283)
T 2i7c_A 73 MTVSKE---PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVT 149 (283)
T ss_dssp HTTSSS---CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCC
T ss_pred HhcCCC---CCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCC
Confidence 344444 6799999999999999999873 799999999999999998753 36888888754333336
Q ss_pred CcccEEEECCchhhhccccccCCchHHHH--HHHHHHHHHhccCCcEEEEEEcC--CChHHHHHHHHHHHHcCCCC
Q 043626 112 GVVDGAISISAVQWLCNADKASHEPRLRL--KAFFGSLYRCLARGARAVFQIYP--ESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 112 ~~fD~Vis~~~l~~l~~~~~~~~~p~~~l--~~~l~~l~~~LkpgG~lv~~~~~--~~~~~~~~i~~~~~~aGF~~ 183 (291)
++||+|++....++.. ...+ ..+++.+.++|+|||.++++... ........+...+.+. |..
T Consensus 150 ~~fD~Ii~d~~~~~~~---------~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~ 215 (283)
T 2i7c_A 150 NTYDVIIVDSSDPIGP---------AETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL-FKK 215 (283)
T ss_dssp SCEEEEEEECCCTTTG---------GGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT-CSE
T ss_pred CCceEEEEcCCCCCCc---------chhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHH-CCc
Confidence 7899999965443321 1112 58999999999999999998642 2334555566665555 764
No 200
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.41 E-value=6e-13 Score=121.29 Aligned_cols=125 Identities=16% Similarity=0.105 Sum_probs=91.6
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcC----------CcceEEEccCCCCCCCCCCcccEEEE
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALERE----------VEGDLLLGDMGQGLGLRPGVVDGAIS 119 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~----------~~~~~~~~D~~~~~~~~~~~fD~Vis 119 (291)
+.+|||||||+|.++..+++. +.++++||+++.+++.|+++. ..+.++.+|+...++...++||+|++
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVII 157 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEE
Confidence 679999999999999999987 479999999999999998864 24688999975444444689999999
Q ss_pred CCchhhhccccccCCchHHH--HHHHHHHHHHhccCCcEEEEEEcC---CChHHHHHHHHHHHHcCCCC
Q 043626 120 ISAVQWLCNADKASHEPRLR--LKAFFGSLYRCLARGARAVFQIYP---ESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 120 ~~~l~~l~~~~~~~~~p~~~--l~~~l~~l~~~LkpgG~lv~~~~~---~~~~~~~~i~~~~~~aGF~~ 183 (291)
....++.. ..|... ...++..++++|+|||.++++... .+......+...+... |..
T Consensus 158 d~~~~~~~------~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~-F~~ 219 (314)
T 1uir_A 158 DLTDPVGE------DNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREA-FRY 219 (314)
T ss_dssp ECCCCBST------TCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTT-CSE
T ss_pred CCCCcccc------cCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHH-CCc
Confidence 86654400 011111 268999999999999999997533 2234555666666655 654
No 201
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.41 E-value=4e-12 Score=111.51 Aligned_cols=148 Identities=10% Similarity=0.011 Sum_probs=93.6
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCC-C-CCC---CCcccEEE
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALEREV------EGDLLLGDMGQG-L-GLR---PGVVDGAI 118 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~-~-~~~---~~~fD~Vi 118 (291)
+.+|||||||+|.++..++.. +..++|+|+|+.|++.|+++.. .+.++++|+.+. + ++. +++||+|+
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~ 145 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCM 145 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEE
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEE
Confidence 569999999999999888876 5899999999999999988642 278999997542 2 343 26899999
Q ss_pred ECCchhhhcc-------ccccCCchHHH-----------------HHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHH
Q 043626 119 SISAVQWLCN-------ADKASHEPRLR-----------------LKAFFGSLYRCLARGARAVFQIYPESVAQRELILG 174 (291)
Q Consensus 119 s~~~l~~l~~-------~~~~~~~p~~~-----------------l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~ 174 (291)
++..+++... .+...+.|... +..++......|+++|.+++...... ....+.+
T Consensus 146 ~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~--~~~~~~~ 223 (254)
T 2h00_A 146 CNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKC--SLAPLKE 223 (254)
T ss_dssp ECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESSTT--SHHHHHH
T ss_pred ECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEEECCCChh--HHHHHHH
Confidence 9976654430 00111112111 12334445667788887776654322 3466788
Q ss_pred HHHHcCCCCcEEEeCCCCCCCCcEEEEEe
Q 043626 175 AAMRAGFAGGVVVDYPHSSKSRKEFLVLT 203 (291)
Q Consensus 175 ~~~~aGF~~~~~~~~p~~~~~~~~~l~l~ 203 (291)
.+.++||....+...... ....|++.+
T Consensus 224 ~l~~~Gf~~v~~~~~~~g--~~~~~~~~w 250 (254)
T 2h00_A 224 ELRIQGVPKVTYTEFCQG--RTMRWALAW 250 (254)
T ss_dssp HHHHTTCSEEEEEEEEET--TEEEEEEEE
T ss_pred HHHHcCCCceEEEEEecC--CceEEEEEe
Confidence 899999987444444322 234444443
No 202
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.41 E-value=1e-11 Score=105.27 Aligned_cols=115 Identities=15% Similarity=0.222 Sum_probs=89.3
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcCC----cceEEEccCCCCCCCCCCcccEEEECCchhhh
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALEREV----EGDLLLGDMGQGLGLRPGVVDGAISISAVQWL 126 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~~----~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l 126 (291)
+.+|||+|||+|.++..++..+ ..++|+|+|+.+++.|+++.. .+.++++|+.+ ++ ++||+|+++..+++.
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~---~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-FN---SRVDIVIMNPPFGSQ 125 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG-CC---CCCSEEEECCCCSSS
T ss_pred cCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH-cC---CCCCEEEEcCCCccc
Confidence 6799999999999999999987 579999999999999998764 57899999844 33 589999999887765
Q ss_pred ccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 127 CNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 127 ~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
... . ...++..+.++| |+.+++.+ .+....+.+...+...||..
T Consensus 126 ~~~------~---~~~~l~~~~~~l--~~~~~~~~--~~~~~~~~~~~~l~~~g~~~ 169 (207)
T 1wy7_A 126 RKH------A---DRPFLLKAFEIS--DVVYSIHL--AKPEVRRFIEKFSWEHGFVV 169 (207)
T ss_dssp STT------T---THHHHHHHHHHC--SEEEEEEE--CCHHHHHHHHHHHHHTTEEE
T ss_pred cCC------c---hHHHHHHHHHhc--CcEEEEEe--CCcCCHHHHHHHHHHCCCeE
Confidence 321 1 346788888888 55544443 23455667778888999864
No 203
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.41 E-value=9.6e-13 Score=119.52 Aligned_cols=127 Identities=13% Similarity=0.049 Sum_probs=84.8
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeC----CHHHHHHHH-hcC--CcceEEEc-cCCCCCCCCCCcccEEEECCch
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDI----SQSMLNIAL-ERE--VEGDLLLG-DMGQGLGLRPGVVDGAISISAV 123 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDi----s~~ml~~a~-~~~--~~~~~~~~-D~~~~~~~~~~~fD~Vis~~~l 123 (291)
+.+|||||||+|.++..+++. ..|+|||+ ++.+++.+. +.. ..+.++.+ |+.. + +.++||+|+|..++
T Consensus 83 g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~-l--~~~~fD~V~sd~~~ 158 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFF-I--PPERCDTLLCDIGE 158 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTT-S--CCCCCSEEEECCCC
T ss_pred CCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEecccccc-C--CcCCCCEEEECCcc
Confidence 579999999999999999998 68999999 565443221 111 34677877 7733 3 35799999998765
Q ss_pred h---hhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeCCCC
Q 043626 124 Q---WLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHS 192 (291)
Q Consensus 124 ~---~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~p~~ 192 (291)
+ |+.+ ... ...+|..+.++|+|||.|++.++.........+...+... |.. +.+..|.+
T Consensus 159 ~~g~~~~d-------~~~-~l~~L~~~~~~LkpGG~~v~kv~~~~~~~~~~~l~~l~~~-f~~-v~~~kP~s 220 (305)
T 2p41_A 159 SSPNPTVE-------AGR-TLRVLNLVENWLSNNTQFCVKVLNPYMSSVIEKMEALQRK-HGG-ALVRNPLS 220 (305)
T ss_dssp CCSSHHHH-------HHH-HHHHHHHHHHHCCTTCEEEEEESCCCSHHHHHHHHHHHHH-HCC-EEECCTTS
T ss_pred ccCcchhh-------HHH-HHHHHHHHHHHhCCCCEEEEEeCCCCCchHHHHHHHHHHH-cCC-EEEecCCC
Confidence 3 3221 111 1257888999999999999987654333434444444433 665 55556633
No 204
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.40 E-value=2.6e-13 Score=116.66 Aligned_cols=95 Identities=20% Similarity=0.117 Sum_probs=77.3
Q ss_pred CCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCC---C-CCcccEEE
Q 043626 52 PRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGL---R-PGVVDGAI 118 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~---~-~~~fD~Vi 118 (291)
+.+|||||||+|.++..+++. +.+|+++|+++.+++.|+++.. .+.++.+|+.+.++. . .++||+|+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~ 138 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIF 138 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEE
Confidence 679999999999999999987 6899999999999999987652 378899987443221 1 26799999
Q ss_pred ECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 119 SISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 119 s~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+.....+ ...++..+.++|+|||.+++.
T Consensus 139 ~d~~~~~--------------~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 139 IDADKQN--------------NPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp ECSCGGG--------------HHHHHHHHHHTCCTTCEEEEE
T ss_pred EcCCcHH--------------HHHHHHHHHHhcCCCcEEEEe
Confidence 8765432 457899999999999999986
No 205
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.40 E-value=1e-13 Score=136.08 Aligned_cols=99 Identities=24% Similarity=0.416 Sum_probs=77.9
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCC-CCCCCcccEEEECCchhh
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGL-GLRPGVVDGAISISAVQW 125 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~-~~~~~~fD~Vis~~~l~~ 125 (291)
+.+|||||||.|.++..|+++|..|+|||+|+.+|+.|+... .++++.++++.+.. .+.+++||+|+|..+++|
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~eh 146 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFHH 146 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHHH
T ss_pred CCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcchhc
Confidence 679999999999999999999999999999999999998653 34789999874321 456789999999999999
Q ss_pred hccccccCCchHHHHHHHHHHHHHhccCCcEEEE
Q 043626 126 LCNADKASHEPRLRLKAFFGSLYRCLARGARAVF 159 (291)
Q Consensus 126 l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~ 159 (291)
+.++.. + ..+..+.+.|+++|..++
T Consensus 147 v~~~~~--------~-~~~~~~~~tl~~~~~~~~ 171 (569)
T 4azs_A 147 IVHLHG--------I-DEVKRLLSRLADVTQAVI 171 (569)
T ss_dssp HHHHHC--------H-HHHHHHHHHHHHHSSEEE
T ss_pred CCCHHH--------H-HHHHHHHHHhccccceee
Confidence 976321 1 223346666777776554
No 206
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.40 E-value=9.3e-14 Score=129.71 Aligned_cols=123 Identities=18% Similarity=0.184 Sum_probs=88.3
Q ss_pred chhhccccccchh-HHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCC------CchhHHHHHHc---CCeEEEEeCCHHHH
Q 043626 17 DTEARKYTSSSRI-IDIQAKLSERALELLALPDDGVPRLLLDIGCG------SGLSGETLSEN---GHQWIGLDISQSML 86 (291)
Q Consensus 17 ~~~a~~Y~~~~~~-~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcG------sG~~~~~L~~~---g~~v~gvDis~~ml 86 (291)
+..|..|.+.... ......+.+++++.+..+ +.+||||||| +|..+..++.. +..|+|+|+|+.|.
T Consensus 185 d~lA~~Y~tDK~~~~h~y~~~Ye~lL~~l~~~----~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~ 260 (419)
T 3sso_A 185 SELSSRYFTPKFGFLHWFTPHYDRHFRDYRNQ----QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH 260 (419)
T ss_dssp HHHHHHTTCTTBSSSCBCHHHHHHHHGGGTTS----CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG
T ss_pred HHHHHHhCCCcccccchHHHHHHHHHHhhcCC----CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh
Confidence 3677778664332 111224455666555432 5799999999 66656555543 58999999999983
Q ss_pred HHHHhcCCcceEEEccCCCCCCCC------CCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 87 NIALEREVEGDLLLGDMGQGLGLR------PGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 87 ~~a~~~~~~~~~~~~D~~~~~~~~------~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
....++.++++|+ ..++|. .++||+|+|..+ +++.+ ...+|.+++++|||||++++.
T Consensus 261 ----~~~~rI~fv~GDa-~dlpf~~~l~~~d~sFDlVisdgs-H~~~d-----------~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 261 ----VDELRIRTIQGDQ-NDAEFLDRIARRYGPFDIVIDDGS-HINAH-----------VRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp ----GCBTTEEEEECCT-TCHHHHHHHHHHHCCEEEEEECSC-CCHHH-----------HHHHHHHHGGGEEEEEEEEEE
T ss_pred ----hcCCCcEEEEecc-cccchhhhhhcccCCccEEEECCc-ccchh-----------HHHHHHHHHHhcCCCeEEEEE
Confidence 2445689999998 445665 689999999754 44433 678999999999999999995
No 207
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.40 E-value=1.5e-12 Score=118.63 Aligned_cols=130 Identities=15% Similarity=0.097 Sum_probs=93.6
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCC-----cceEEEccCCCCC-CCCCCcccEEEECCch
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALEREV-----EGDLLLGDMGQGL-GLRPGVVDGAISISAV 123 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~-----~~~~~~~D~~~~~-~~~~~~fD~Vis~~~l 123 (291)
+.+|||||||+|.++..+++. +.++++||+++.|++.|++++. .+.++.+|..+.+ .+..++||+||+....
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 459999999999999999983 5799999999999999999864 3788999975433 2446899999987543
Q ss_pred hhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC-hHHHHHHHHHHHHcCCCCcEEEeC
Q 043626 124 QWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES-VAQRELILGAAMRAGFAGGVVVDY 189 (291)
Q Consensus 124 ~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~-~~~~~~i~~~~~~aGF~~~~~~~~ 189 (291)
++... .......|+..++++|+|||+++++..... ......+...+... |....++..
T Consensus 170 ~~~~~-------~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~v-F~~v~~~~~ 228 (317)
T 3gjy_A 170 GAITP-------QNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEV-FEHVAVIAD 228 (317)
T ss_dssp TSCCC-------GGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHH-CSEEEEEEC
T ss_pred ccccc-------hhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHH-CCceEEEEe
Confidence 32110 000025899999999999999999886432 23344555555555 776444443
No 208
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.39 E-value=1.1e-12 Score=115.24 Aligned_cols=131 Identities=11% Similarity=0.004 Sum_probs=98.1
Q ss_pred CCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCCCCC-cccEEEECCc
Q 043626 52 PRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGLRPG-VVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~~~~-~fD~Vis~~~ 122 (291)
+.+|||||||+|.++..|+..+ ..|+|+|+++.+++.|+++.. .+.+.++|..+.++ ++ +||+|++..+
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~--~~~~~D~Iviagm 99 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIE--KKDAIDTIVIAGM 99 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC--GGGCCCEEEEEEE
T ss_pred CCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccC--ccccccEEEEeCC
Confidence 6799999999999999999987 479999999999999998742 27899999755432 34 5999887555
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeCCCCCCCCcEEEEE
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFLVL 202 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~p~~~~~~~~~l~l 202 (291)
.-.+ +..++......|+++++|+++-.. ....+..++...||.- ++.--.....++|-++
T Consensus 100 Gg~l-------------I~~IL~~~~~~L~~~~~lIlq~~~----~~~~lr~~L~~~Gf~i---~~E~lv~e~~k~Yeii 159 (244)
T 3gnl_A 100 GGTL-------------IRTILEEGAAKLAGVTKLILQPNI----AAWQLREWSEQNNWLI---TSEAILREDNKVYEIM 159 (244)
T ss_dssp CHHH-------------HHHHHHHTGGGGTTCCEEEEEESS----CHHHHHHHHHHHTEEE---EEEEEEEETTEEEEEE
T ss_pred chHH-------------HHHHHHHHHHHhCCCCEEEEEcCC----ChHHHHHHHHHCCCEE---EEEEEEEECCEEEEEE
Confidence 4333 678899999999999999998632 3567888899999974 1111112244666555
Q ss_pred ee
Q 043626 203 TC 204 (291)
Q Consensus 203 ~~ 204 (291)
.+
T Consensus 160 ~~ 161 (244)
T 3gnl_A 160 VL 161 (244)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 209
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.39 E-value=8.2e-14 Score=118.92 Aligned_cols=94 Identities=19% Similarity=0.157 Sum_probs=76.9
Q ss_pred CCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCCCCCcccEEEECCc
Q 043626 52 PRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGLRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~~~~~fD~Vis~~~ 122 (291)
+.+|||||||+|.++..++.. +..++++|+|+.+++.|+++.. .+.++.+|+.+.++..++ ||+|++...
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~ 135 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD 135 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC
Confidence 569999999999999999987 5799999999999999987652 368899987544454456 999998632
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
. .+ ...++..+.++|+|||.+++.
T Consensus 136 ~---~~-----------~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 136 V---FN-----------GADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp T---SC-----------HHHHHHHHGGGEEEEEEEEEE
T ss_pred h---hh-----------hHHHHHHHHHhcCCCeEEEEE
Confidence 2 11 568899999999999999985
No 210
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.39 E-value=1.8e-12 Score=117.66 Aligned_cols=124 Identities=15% Similarity=0.073 Sum_probs=88.0
Q ss_pred CCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcC---------CcceEEEccCCCCCCCCCCcccEEEEC
Q 043626 52 PRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALERE---------VEGDLLLGDMGQGLGLRPGVVDGAISI 120 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~---------~~~~~~~~D~~~~~~~~~~~fD~Vis~ 120 (291)
+.+|||||||+|.++..+++.. .++++||+++.|++.|+++. ..+.++.+|+.+.++...++||+|++.
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d 175 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITD 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEEC
Confidence 6799999999999999999874 79999999999999999864 247888898744344456899999987
Q ss_pred CchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc-C-CChHHHHHHHHHHHHcCCCC
Q 043626 121 SAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY-P-ESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 121 ~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~-~-~~~~~~~~i~~~~~~aGF~~ 183 (291)
...++.+. .......+++.++++|+|||.++++.. + ........+...+.+. |..
T Consensus 176 ~~~~~~~~-------~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-f~~ 232 (304)
T 2o07_A 176 SSDPMGPA-------ESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSL-FPV 232 (304)
T ss_dssp CC------------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHH-CSE
T ss_pred CCCCCCcc-------hhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHh-CCC
Confidence 55432211 011135789999999999999999863 2 2333444555544444 654
No 211
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.38 E-value=1.1e-11 Score=115.41 Aligned_cols=119 Identities=16% Similarity=0.127 Sum_probs=93.5
Q ss_pred CCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcCC-----cceEEEccCCCCCCC-CCCcccEEEECCch
Q 043626 52 PRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALEREV-----EGDLLLGDMGQGLGL-RPGVVDGAISISAV 123 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~~-----~~~~~~~D~~~~~~~-~~~~fD~Vis~~~l 123 (291)
+.+||||| |+|.++..++..+ ..|+|+|+|+.|++.|+++.. .+.++.+|+...++. ..++||+|+++.++
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~ 251 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPE 251 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCS
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCC
Confidence 67999999 9999999999876 599999999999999998743 578999999664664 35689999998765
Q ss_pred hhhccccccCCchHHHHHHHHHHHHHhccCCc-EEEEEEcC--CChHHHHHHHHHHH-HcCCCC
Q 043626 124 QWLCNADKASHEPRLRLKAFFGSLYRCLARGA-RAVFQIYP--ESVAQRELILGAAM-RAGFAG 183 (291)
Q Consensus 124 ~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG-~lv~~~~~--~~~~~~~~i~~~~~-~aGF~~ 183 (291)
++. ....++..++++|+||| .+++.+.. .+......+...+. +.||..
T Consensus 252 ~~~------------~~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 303 (373)
T 2qm3_A 252 TLE------------AIRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVI 303 (373)
T ss_dssp SHH------------HHHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEE
T ss_pred chH------------HHHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcch
Confidence 542 14789999999999999 45777765 44433355666666 788864
No 212
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.38 E-value=9.1e-13 Score=126.77 Aligned_cols=111 Identities=21% Similarity=0.216 Sum_probs=86.5
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGL 107 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~ 107 (291)
.+.+.+++.+...+ +.+|||||||+|.++..+++.+ ..|+|+|+|+ |++.|+++. ..+.++.+|+.+ +
T Consensus 145 ~~~~~il~~l~~~~---~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~-~ 219 (480)
T 3b3j_A 145 TYQRAILQNHTDFK---DKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEE-V 219 (480)
T ss_dssp HHHHHHHHTGGGTT---TCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTT-C
T ss_pred HHHHHHHHhhhhcC---CCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhh-C
Confidence 34455666665444 6799999999999999999986 5999999998 998887753 347899999854 4
Q ss_pred CCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 108 GLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 108 ~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
++ +++||+|+|+.+++|+.+. ....++..+.++|+|||.+++.
T Consensus 220 ~~-~~~fD~Ivs~~~~~~~~~e---------~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 220 SL-PEQVDIIISEPMGYMLFNE---------RMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp CC-SSCEEEEECCCCHHHHTCH---------HHHHHHHHGGGGEEEEEEEESC
T ss_pred cc-CCCeEEEEEeCchHhcCcH---------HHHHHHHHHHHhcCCCCEEEEE
Confidence 44 3689999999887877541 2456677889999999999864
No 213
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.38 E-value=2.4e-12 Score=115.68 Aligned_cols=86 Identities=17% Similarity=0.246 Sum_probs=72.4
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLG 108 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~ 108 (291)
.+.+.+++.+.+.+ +.+|||||||+|.++..|++.+..|+|+|+|+.|++.++++.. .+.++.+|+.. ++
T Consensus 15 ~i~~~i~~~~~~~~---~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~-~~ 90 (285)
T 1zq9_A 15 LIINSIIDKAALRP---TDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLK-TD 90 (285)
T ss_dssp HHHHHHHHHTCCCT---TCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTT-SC
T ss_pred HHHHHHHHhcCCCC---CCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceec-cc
Confidence 56778888887765 6799999999999999999999999999999999999988652 47899999843 44
Q ss_pred CCCCcccEEEECCchhhh
Q 043626 109 LRPGVVDGAISISAVQWL 126 (291)
Q Consensus 109 ~~~~~fD~Vis~~~l~~l 126 (291)
+ .+||+|+++..++|.
T Consensus 91 ~--~~fD~vv~nlpy~~~ 106 (285)
T 1zq9_A 91 L--PFFDTCVANLPYQIS 106 (285)
T ss_dssp C--CCCSEEEEECCGGGH
T ss_pred c--hhhcEEEEecCcccc
Confidence 4 379999998777764
No 214
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.37 E-value=7.1e-13 Score=115.50 Aligned_cols=96 Identities=16% Similarity=0.145 Sum_probs=77.9
Q ss_pred CCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCC--------------
Q 043626 52 PRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLG-------------- 108 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~-------------- 108 (291)
+.+|||||||+|.++..++.. +..|+++|+++.+++.|+++.. .+.++.+|+.+.++
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 679999999999999999987 5799999999999999988742 27888888643222
Q ss_pred CCC--CcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 109 LRP--GVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 109 ~~~--~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
|.. ++||+|++...... +..+|..+.++|+|||++++..
T Consensus 141 f~~~~~~fD~I~~~~~~~~--------------~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDADKEN--------------YPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TCCSTTCEEEEEECSCGGG--------------HHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCCCcCEEEEeCCHHH--------------HHHHHHHHHHHcCCCeEEEEEc
Confidence 222 78999998755433 4578999999999999999964
No 215
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.37 E-value=4.8e-12 Score=117.03 Aligned_cols=131 Identities=16% Similarity=0.094 Sum_probs=100.6
Q ss_pred HHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcCC-----cceEEEccCCCCCCC
Q 043626 37 SERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALEREV-----EGDLLLGDMGQGLGL 109 (291)
Q Consensus 37 ~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~~-----~~~~~~~D~~~~~~~ 109 (291)
...+++.+.+.. ..+|||||||+|.++..|++.. ..++..|. +.+++.|+++.. .++++.+|+.+. +
T Consensus 168 ~~~~~~~~~~~~---~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~-~- 241 (353)
T 4a6d_A 168 GRSVLTAFDLSV---FPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKD-P- 241 (353)
T ss_dssp HHHHHHSSCGGG---CSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTS-C-
T ss_pred HHHHHHhcCccc---CCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccC-C-
Confidence 345566655554 5699999999999999999885 67888897 889999987653 378999998543 3
Q ss_pred CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc--CCC---h------------------
Q 043626 110 RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY--PES---V------------------ 166 (291)
Q Consensus 110 ~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~--~~~---~------------------ 166 (291)
...+|+|++.++||++++ .....+|+++++.|+|||++++.-. +++ +
T Consensus 242 -~~~~D~~~~~~vlh~~~d---------~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~e 311 (353)
T 4a6d_A 242 -LPEADLYILARVLHDWAD---------GKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQE 311 (353)
T ss_dssp -CCCCSEEEEESSGGGSCH---------HHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCC
T ss_pred -CCCceEEEeeeecccCCH---------HHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcC
Confidence 345899999999998865 2357899999999999999998532 111 0
Q ss_pred HHHHHHHHHHHHcCCCC
Q 043626 167 AQRELILGAAMRAGFAG 183 (291)
Q Consensus 167 ~~~~~i~~~~~~aGF~~ 183 (291)
...+++..++.++||+.
T Consensus 312 rt~~e~~~ll~~AGf~~ 328 (353)
T 4a6d_A 312 RTPTHYHMLLSSAGFRD 328 (353)
T ss_dssp CCHHHHHHHHHHHTCEE
T ss_pred CCHHHHHHHHHHCCCce
Confidence 12456788899999986
No 216
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.37 E-value=2.6e-12 Score=118.76 Aligned_cols=120 Identities=13% Similarity=0.106 Sum_probs=93.3
Q ss_pred CCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccc
Q 043626 52 PRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNA 129 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~ 129 (291)
..+|||||||+|.++..+++.+ ..++++|+ +.|++.|++ ...+.++.+|+.+ +++ .||+|++..++||+.+
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~--~~~--~~D~v~~~~vlh~~~d- 266 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG-NENLNFVGGDMFK--SIP--SADAVLLKWVLHDWND- 266 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC-CSSEEEEECCTTT--CCC--CCSEEEEESCGGGSCH-
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc-CCCcEEEeCccCC--CCC--CceEEEEcccccCCCH-
Confidence 5799999999999999999874 68999999 789887765 3458999999865 443 4999999999999865
Q ss_pred cccCCchHHHHHHHHHHHHHhccC---CcEEEEEEc--CCCh------H------------------HHHHHHHHHHHcC
Q 043626 130 DKASHEPRLRLKAFFGSLYRCLAR---GARAVFQIY--PESV------A------------------QRELILGAAMRAG 180 (291)
Q Consensus 130 ~~~~~~p~~~l~~~l~~l~~~Lkp---gG~lv~~~~--~~~~------~------------------~~~~i~~~~~~aG 180 (291)
.....++++++++|+| ||++++... +... . ..+.+..++.++|
T Consensus 267 --------~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aG 338 (358)
T 1zg3_A 267 --------EQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAG 338 (358)
T ss_dssp --------HHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTT
T ss_pred --------HHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcC
Confidence 2245899999999999 999988532 2111 0 2346677888999
Q ss_pred CCCcEE
Q 043626 181 FAGGVV 186 (291)
Q Consensus 181 F~~~~~ 186 (291)
|....+
T Consensus 339 f~~~~~ 344 (358)
T 1zg3_A 339 FSSYKI 344 (358)
T ss_dssp CCEEEE
T ss_pred CCeeEE
Confidence 986333
No 217
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.37 E-value=2.3e-12 Score=117.53 Aligned_cols=122 Identities=18% Similarity=0.116 Sum_probs=87.5
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCC---------cceEEEccCCCCCCCCCCcccEEEEC
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALEREV---------EGDLLLGDMGQGLGLRPGVVDGAISI 120 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~---------~~~~~~~D~~~~~~~~~~~fD~Vis~ 120 (291)
+.+|||||||+|.++..+++. +.++++||+|+.+++.|+++.. .+.++.+|+...++...++||+|++.
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d 188 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITD 188 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEEC
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEc
Confidence 679999999999999999987 3799999999999999998763 36788888744343346789999987
Q ss_pred CchhhhccccccCCchHHHH--HHHHHHHHHhccCCcEEEEEEcC--CChHHHHHHHHHHHHcCCCC
Q 043626 121 SAVQWLCNADKASHEPRLRL--KAFFGSLYRCLARGARAVFQIYP--ESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 121 ~~l~~l~~~~~~~~~p~~~l--~~~l~~l~~~LkpgG~lv~~~~~--~~~~~~~~i~~~~~~aGF~~ 183 (291)
...++- |...+ ..++..++++|+|||.++++... ........+...+... |..
T Consensus 189 ~~~~~~---------~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~v-F~~ 245 (314)
T 2b2c_A 189 SSDPVG---------PAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKI-FPA 245 (314)
T ss_dssp CC----------------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHH-CSE
T ss_pred CCCCCC---------cchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHH-CCc
Confidence 543221 22222 68999999999999999998632 2334455566666555 764
No 218
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.37 E-value=1.9e-12 Score=120.71 Aligned_cols=136 Identities=25% Similarity=0.205 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCC--eEEEEeCCHHHHHHHHhcCC------cceEEEccCC
Q 043626 33 QAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGH--QWIGLDISQSMLNIALEREV------EGDLLLGDMG 104 (291)
Q Consensus 33 q~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~--~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~ 104 (291)
...++..++.+. ..+ +..|||+|||+|.++..++..+. .++|+|+|+.|++.|+++.. .+.++++|+
T Consensus 203 ~~~la~~l~~~~-~~~---~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~- 277 (373)
T 3tm4_A 203 KASIANAMIELA-ELD---GGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDA- 277 (373)
T ss_dssp CHHHHHHHHHHH-TCC---SCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCG-
T ss_pred cHHHHHHHHHhh-cCC---CCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh-
Confidence 345666677776 544 67999999999999999999885 99999999999999998752 478999998
Q ss_pred CCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 105 QGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 105 ~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
..+++..++||+|+++..+..-... ...-..-...++..+.++| ||.+++.+. + ...+...+.+.||..
T Consensus 278 ~~~~~~~~~fD~Ii~npPyg~r~~~---~~~~~~ly~~~~~~l~r~l--~g~~~~i~~--~---~~~~~~~~~~~G~~~ 346 (373)
T 3tm4_A 278 TQLSQYVDSVDFAISNLPYGLKIGK---KSMIPDLYMKFFNELAKVL--EKRGVFITT--E---KKAIEEAIAENGFEI 346 (373)
T ss_dssp GGGGGTCSCEEEEEEECCCC---------CCHHHHHHHHHHHHHHHE--EEEEEEEES--C---HHHHHHHHHHTTEEE
T ss_pred hhCCcccCCcCEEEECCCCCcccCc---chhHHHHHHHHHHHHHHHc--CCeEEEEEC--C---HHHHHHHHHHcCCEE
Confidence 4467767899999998665432110 0112222478889999999 555555442 2 234456777889875
No 219
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.36 E-value=2.6e-12 Score=114.66 Aligned_cols=110 Identities=13% Similarity=0.054 Sum_probs=85.7
Q ss_pred CCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCCCCCCcccEEEECCchh
Q 043626 52 PRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLGLRPGVVDGAISISAVQ 124 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~ 124 (291)
+.+|||+|||+|.++..++..+ ..|+|+|+|+.+++.|+++. .++.++.+|+.+. +. .++||+|+++...
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~-~~~~D~Vi~d~p~- 196 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL-KDVADRVIMGYVH- 196 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC-TTCEEEEEECCCS-
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc-cCCceEEEECCcc-
Confidence 6799999999999999999885 49999999999999998864 3468999998654 54 6789999988554
Q ss_pred hhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCCh---HHHHHHHHHHHH
Q 043626 125 WLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESV---AQRELILGAAMR 178 (291)
Q Consensus 125 ~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~---~~~~~i~~~~~~ 178 (291)
+ ...++..+.+.|+|||.+++...+... .....+...+.+
T Consensus 197 ---~-----------~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~ 239 (272)
T 3a27_A 197 ---K-----------THKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAE 239 (272)
T ss_dssp ---S-----------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHH
T ss_pred ---c-----------HHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHH
Confidence 1 446888999999999999998765422 234444444444
No 220
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.35 E-value=5.3e-13 Score=117.50 Aligned_cols=95 Identities=16% Similarity=0.124 Sum_probs=77.2
Q ss_pred CCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCC------CCCcccE
Q 043626 52 PRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGL------RPGVVDG 116 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~------~~~~fD~ 116 (291)
+.+|||||||+|.++..++.. +..++++|+|+.+++.|+++.. .+.++.+|+.+.++. ..++||+
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 159 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDF 159 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSE
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEE
Confidence 569999999999999999986 6899999999999999988642 368888887543332 1578999
Q ss_pred EEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 117 AISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 117 Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
|++..... + ...++..+.++|+|||.+++.
T Consensus 160 V~~d~~~~---~-----------~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 160 IFVDADKD---N-----------YLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp EEECSCST---T-----------HHHHHHHHHHHBCTTCCEEEE
T ss_pred EEEcCchH---H-----------HHHHHHHHHHhCCCCeEEEEe
Confidence 99864321 1 568899999999999999986
No 221
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.34 E-value=4.5e-11 Score=113.51 Aligned_cols=131 Identities=15% Similarity=0.148 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCC
Q 043626 32 IQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQG 106 (291)
Q Consensus 32 iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~ 106 (291)
....+.+.+++.+.... +.+|||+|||+|.++..|+..+..|+|+|+|+.|++.|+++. .++.++.+|+.+.
T Consensus 270 ~~e~l~~~~~~~l~~~~---~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~ 346 (433)
T 1uwv_A 270 VNQKMVARALEWLDVQP---EDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEED 346 (433)
T ss_dssp HHHHHHHHHHHHHTCCT---TCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSC
T ss_pred HHHHHHHHHHHhhcCCC---CCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHH
Confidence 35567888888887655 679999999999999999999999999999999999998765 3578999998664
Q ss_pred C---CCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 107 L---GLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 107 ~---~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
+ ++..++||+|+++..... ...++..+. .++|++.++++. ++..+..-...+.+.||..
T Consensus 347 l~~~~~~~~~fD~Vv~dPPr~g--------------~~~~~~~l~-~~~p~~ivyvsc---~p~tlard~~~l~~~Gy~~ 408 (433)
T 1uwv_A 347 VTKQPWAKNGFDKVLLDPARAG--------------AAGVMQQII-KLEPIRIVYVSC---NPATLARDSEALLKAGYTI 408 (433)
T ss_dssp CSSSGGGTTCCSEEEECCCTTC--------------CHHHHHHHH-HHCCSEEEEEES---CHHHHHHHHHHHHHTTCEE
T ss_pred hhhhhhhcCCCCEEEECCCCcc--------------HHHHHHHHH-hcCCCeEEEEEC---ChHHHHhhHHHHHHCCcEE
Confidence 3 345678999998633221 123444444 378999988887 5555555556677889975
No 222
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.34 E-value=7.3e-12 Score=115.11 Aligned_cols=124 Identities=23% Similarity=0.176 Sum_probs=87.9
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCC---------cceEEEccCCCCCC-CCCCcccEEEE
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALEREV---------EGDLLLGDMGQGLG-LRPGVVDGAIS 119 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~---------~~~~~~~D~~~~~~-~~~~~fD~Vis 119 (291)
+.+|||||||+|.++..|++. +.+|++||+|+.|++.|+++.. .+.++.+|+.+.++ +..++||+|++
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~ 200 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIV 200 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEE
T ss_pred CCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEE
Confidence 679999999999999999987 3799999999999999998752 47889999744332 34578999999
Q ss_pred CCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC--CChHHHHHHHHHHHHcCCCC
Q 043626 120 ISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP--ESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 120 ~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~--~~~~~~~~i~~~~~~aGF~~ 183 (291)
.....+-.. .......++..+.++|+|||.++++... ........+...+. ..|..
T Consensus 201 d~~~p~~~~-------~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~-~~F~~ 258 (334)
T 1xj5_A 201 DSSDPIGPA-------KELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCR-EIFKG 258 (334)
T ss_dssp CCCCTTSGG-------GGGGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHH-HHCSS
T ss_pred CCCCccCcc-------hhhhHHHHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHHH-HhCcc
Confidence 754322110 0000258999999999999999997422 22233334444443 34764
No 223
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.33 E-value=1e-11 Score=118.51 Aligned_cols=147 Identities=13% Similarity=0.050 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--C-CeEEEEeCCHHHHHHHHhcC-----CcceEEEccCC
Q 043626 33 QAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--G-HQWIGLDISQSMLNIALERE-----VEGDLLLGDMG 104 (291)
Q Consensus 33 q~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g-~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~ 104 (291)
|...+..+..++...+ +.+|||+|||+|..+..|++. + ..++++|+|+.+++.++++. .++.++++|+.
T Consensus 244 qd~~s~l~~~~l~~~~---g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~ 320 (450)
T 2yxl_A 244 QEEASAVASIVLDPKP---GETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDAR 320 (450)
T ss_dssp CCHHHHHHHHHHCCCT---TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTT
T ss_pred cCchhHHHHHhcCCCC---cCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChh
Confidence 4444555666777665 679999999999999999985 3 79999999999999998764 25788889985
Q ss_pred CCCC-CCCCcccEEEEC------Cchhhhcccc--ccCCc---hHHHHHHHHHHHHHhccCCcEEEEEEcCCChHH-HHH
Q 043626 105 QGLG-LRPGVVDGAISI------SAVQWLCNAD--KASHE---PRLRLKAFFGSLYRCLARGARAVFQIYPESVAQ-REL 171 (291)
Q Consensus 105 ~~~~-~~~~~fD~Vis~------~~l~~l~~~~--~~~~~---p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~-~~~ 171 (291)
...+ +..++||+|++. .++++.++.. ....+ -......++..+.++|+|||++++.+..-++.+ ...
T Consensus 321 ~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~ 400 (450)
T 2yxl_A 321 KAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKN 400 (450)
T ss_dssp CCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHH
T ss_pred hcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHH
Confidence 4322 445789999973 1222211100 00000 000115789999999999999998876544332 334
Q ss_pred HHHHHHHc-CCC
Q 043626 172 ILGAAMRA-GFA 182 (291)
Q Consensus 172 i~~~~~~a-GF~ 182 (291)
+...+.+. +|.
T Consensus 401 v~~~l~~~~~~~ 412 (450)
T 2yxl_A 401 IRWFLNVHPEFK 412 (450)
T ss_dssp HHHHHHHCSSCE
T ss_pred HHHHHHhCCCCE
Confidence 44445554 564
No 224
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.33 E-value=1.3e-11 Score=117.01 Aligned_cols=142 Identities=14% Similarity=0.122 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcCC----cceEEEccCCC
Q 043626 32 IQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALEREV----EGDLLLGDMGQ 105 (291)
Q Consensus 32 iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~~----~~~~~~~D~~~ 105 (291)
+|...+..+..++...+ +.+|||+|||+|..+..+++.+ ..++|+|+|+.+++.++++.. .+.++++|+..
T Consensus 230 ~qd~~s~~~~~~l~~~~---g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~ 306 (429)
T 1sqg_A 230 VQDASAQGCMTWLAPQN---GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY 306 (429)
T ss_dssp ECCHHHHTHHHHHCCCT---TCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTC
T ss_pred eeCHHHHHHHHHcCCCC---cCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhh
Confidence 34555666777777665 6799999999999999999875 699999999999999987642 46888999854
Q ss_pred CCC-CCCCcccEEEECC------chhhhccccccC-CchH------HHHHHHHHHHHHhccCCcEEEEEEcCCChH-HHH
Q 043626 106 GLG-LRPGVVDGAISIS------AVQWLCNADKAS-HEPR------LRLKAFFGSLYRCLARGARAVFQIYPESVA-QRE 170 (291)
Q Consensus 106 ~~~-~~~~~fD~Vis~~------~l~~l~~~~~~~-~~p~------~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~-~~~ 170 (291)
..+ +..++||+|++.. ++++.++ ... ..+. .....++..+.++|+|||++++.+..-.+. ...
T Consensus 307 ~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~--~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~ 384 (429)
T 1sqg_A 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPD--IKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSL 384 (429)
T ss_dssp THHHHTTCCEEEEEEECCCCCGGGTTTCTT--HHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHH
T ss_pred chhhcccCCCCEEEEeCCCCcccccCCCcc--hhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHH
Confidence 221 4457899999742 1221111 000 0000 112588999999999999999987543332 233
Q ss_pred HHHHHHHH
Q 043626 171 LILGAAMR 178 (291)
Q Consensus 171 ~i~~~~~~ 178 (291)
.+...+.+
T Consensus 385 ~v~~~l~~ 392 (429)
T 1sqg_A 385 QIKAFLQR 392 (429)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 34444444
No 225
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.32 E-value=3.5e-12 Score=113.85 Aligned_cols=122 Identities=12% Similarity=0.079 Sum_probs=84.7
Q ss_pred HHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--C-CeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCCC
Q 043626 38 ERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--G-HQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLGL 109 (291)
Q Consensus 38 ~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g-~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~~ 109 (291)
..+..++...+ +.+|||+|||+|..+..|++. + ..|+|+|+|+.+++.++++. .++.++.+|+.. ++.
T Consensus 73 ~l~~~~l~~~~---g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~-~~~ 148 (274)
T 3ajd_A 73 MIPPIVLNPRE---DDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRK-YKD 148 (274)
T ss_dssp GHHHHHHCCCT---TCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHH-HHH
T ss_pred HHHHHHhCCCC---cCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHh-cch
Confidence 34455666655 679999999999999999984 4 79999999999999998764 357888888743 322
Q ss_pred ----CCCcccEEEECCchh---hhcc-ccc---cCCchHHHHHHHHHHHHHhccCCcEEEEEEcC
Q 043626 110 ----RPGVVDGAISISAVQ---WLCN-ADK---ASHEPRLRLKAFFGSLYRCLARGARAVFQIYP 163 (291)
Q Consensus 110 ----~~~~fD~Vis~~~l~---~l~~-~~~---~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~ 163 (291)
..++||+|++..... .+.. +.. ...+-......++..++++|+|||++++.+..
T Consensus 149 ~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 149 YLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp HHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 257899999873221 1100 000 00000011468899999999999999998754
No 226
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.32 E-value=2e-13 Score=119.88 Aligned_cols=95 Identities=16% Similarity=0.061 Sum_probs=76.8
Q ss_pred CCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCCCCC-----CCcccEE
Q 043626 52 PRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGLGLR-----PGVVDGA 117 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~~~~-----~~~fD~V 117 (291)
+.+|||||||+|.++..|++. +..|+++|+++.|++.|+++. ..+.++.+|+.+.++.. .++||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 569999999999999999984 579999999999998887764 24789999975433322 4789999
Q ss_pred EECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 118 ISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 118 is~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
++...... ...++..+.++|+|||.+++.
T Consensus 141 ~~d~~~~~--------------~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 141 FIDADKTN--------------YLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEESCGGG--------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcCChHH--------------hHHHHHHHHHhcCCCeEEEEE
Confidence 98654221 457899999999999999995
No 227
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.31 E-value=3.5e-12 Score=119.70 Aligned_cols=130 Identities=15% Similarity=0.040 Sum_probs=91.8
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC----cceEEEccCCCCCCCCCCcccEEEECCchhhhc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV----EGDLLLGDMGQGLGLRPGVVDGAISISAVQWLC 127 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~----~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~ 127 (291)
+.+|||+|||+|.++..++..|..|+++|+|+.|++.|+++.. ...+.++|+.+.++...+.||+|+++... +.
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~--f~ 292 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPT--LV 292 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCC--CC
T ss_pred CCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCc--CC
Confidence 5699999999999999999999779999999999999988752 24577888754332223459999987432 11
Q ss_pred cccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCCh---HHHHHHHHHHHHcCCCC
Q 043626 128 NADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESV---AQRELILGAAMRAGFAG 183 (291)
Q Consensus 128 ~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~---~~~~~i~~~~~~aGF~~ 183 (291)
........-...+..++..+.++|+|||.+++....... .-...+...+.++|...
T Consensus 293 ~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~ 351 (393)
T 4dmg_A 293 KRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRL 351 (393)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeE
Confidence 111111122334678899999999999999976554332 22346667777787764
No 228
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.31 E-value=7.7e-12 Score=112.67 Aligned_cols=118 Identities=18% Similarity=0.135 Sum_probs=79.6
Q ss_pred CCeEEEEcCCC------chhHHHHHHc---CCeEEEEeCCHHHHHHHHhcCCcceE-EEccCCCCCCCCCCcccEEEECC
Q 043626 52 PRLLLDIGCGS------GLSGETLSEN---GHQWIGLDISQSMLNIALEREVEGDL-LLGDMGQGLGLRPGVVDGAISIS 121 (291)
Q Consensus 52 ~~~VLDiGcGs------G~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~~~~~~-~~~D~~~~~~~~~~~fD~Vis~~ 121 (291)
+.+|||||||+ |. ..+++. +..|+|+|+|+. ...+.+ +++|+.+ +++ .++||+|+|+.
T Consensus 64 g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v~~v~~~i~gD~~~-~~~-~~~fD~Vvsn~ 131 (290)
T 2xyq_A 64 NMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------VSDADSTLIGDCAT-VHT-ANKWDLIISDM 131 (290)
T ss_dssp TCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------BCSSSEEEESCGGG-CCC-SSCEEEEEECC
T ss_pred CCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------CCCCEEEEECcccc-CCc-cCcccEEEEcC
Confidence 67999999955 65 444443 379999999997 245889 9999844 444 37899999986
Q ss_pred chhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 122 AVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 122 ~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
+.++..............+..++..++++|+|||.|++.++..... ..+...+.+.||..
T Consensus 132 ~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~--~~l~~~l~~~GF~~ 191 (290)
T 2xyq_A 132 YDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN--ADLYKLMGHFSWWT 191 (290)
T ss_dssp CCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC--HHHHHHHTTEEEEE
T ss_pred CccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCH--HHHHHHHHHcCCcE
Confidence 5433110000001111224688999999999999999977554322 36777788888975
No 229
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.31 E-value=3.9e-12 Score=119.05 Aligned_cols=129 Identities=9% Similarity=-0.018 Sum_probs=91.3
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcC-----C--cceEEEccCCCCCCC---CCCcccEEEEC
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALERE-----V--EGDLLLGDMGQGLGL---RPGVVDGAISI 120 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~-----~--~~~~~~~D~~~~~~~---~~~~fD~Vis~ 120 (291)
+.+|||+|||+|.++..++..| ..|+|+|+|+.|++.|+++. . ++.++++|+.+.++. ...+||+|++.
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~D 292 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIID 292 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEEC
Confidence 6799999999999999999987 58999999999999998864 2 578999997543331 24589999986
Q ss_pred CchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChH---HHHHHHHHHHHcCCC
Q 043626 121 SAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVA---QRELILGAAMRAGFA 182 (291)
Q Consensus 121 ~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~---~~~~i~~~~~~aGF~ 182 (291)
...... ...........+..++..+.++|+|||.+++...+.... -.+.+...+.++|+.
T Consensus 293 PP~~~~--~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 293 PPSFAR--NKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp CCCC-------CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCE
T ss_pred CCCCCC--ChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCc
Confidence 433110 001122344456788899999999999999998765432 233344445555543
No 230
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.31 E-value=4.2e-12 Score=118.31 Aligned_cols=97 Identities=21% Similarity=0.242 Sum_probs=75.2
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCCCCCCCcccEEEECCchh
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGLGLRPGVVDGAISISAVQ 124 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~ 124 (291)
+..|||||||+|.++..+++.| .+|+|||.|+ |++.|++.. ..+.++.+|+.+ +.+ ++.||+|||...-.
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~-~~l-pe~~DvivsE~~~~ 160 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVET-VEL-PEQVDAIVSEWMGY 160 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTT-CCC-SSCEEEEECCCCBT
T ss_pred CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeee-ecC-CccccEEEeecccc
Confidence 5699999999999999999998 6899999996 788777643 237899999844 554 47899999964443
Q ss_pred hhccccccCCchHHHHHHHHHHHHHhccCCcEEEE
Q 043626 125 WLCNADKASHEPRLRLKAFFGSLYRCLARGARAVF 159 (291)
Q Consensus 125 ~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~ 159 (291)
.+.+.. .+..++....++|+|||.++.
T Consensus 161 ~l~~e~--------~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 161 GLLHES--------MLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TBTTTC--------SHHHHHHHHHHHEEEEEEEES
T ss_pred cccccc--------hhhhHHHHHHhhCCCCceECC
Confidence 333211 167888888999999999875
No 231
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.30 E-value=3.2e-11 Score=107.14 Aligned_cols=111 Identities=8% Similarity=-0.111 Sum_probs=83.7
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC---------cceEEEccCCCCCCCCCCcccEEEECCc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV---------EGDLLLGDMGQGLGLRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~---------~~~~~~~D~~~~~~~~~~~fD~Vis~~~ 122 (291)
+.+|||||||+|.++..++.++.+++++|+++.|++.|+++.. .+.++.+|....+ ++||+|++...
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----~~fD~Ii~d~~ 148 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----KKYDLIFCLQE 148 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----CCEEEEEESSC
T ss_pred CCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----hhCCEEEECCC
Confidence 6799999999999999888777789999999999999988753 3678888874432 78999998621
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC--ChHHHHHHHHHHHHcCCCC
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE--SVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~--~~~~~~~i~~~~~~aGF~~ 183 (291)
+ |. .++..+.++|+|||.++++.... .......+...+... |..
T Consensus 149 -----d-------p~----~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~ 194 (262)
T 2cmg_A 149 -----P-------DI----HRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGV-FSV 194 (262)
T ss_dssp -----C-------CH----HHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTT-CSE
T ss_pred -----C-------hH----HHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHh-CCc
Confidence 2 22 38999999999999999975332 223444455555443 664
No 232
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.29 E-value=2.6e-12 Score=112.18 Aligned_cols=96 Identities=15% Similarity=0.155 Sum_probs=77.2
Q ss_pred CCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCC-C-----CCCcccE
Q 043626 52 PRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLG-L-----RPGVVDG 116 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~-~-----~~~~fD~ 116 (291)
+.+|||||||+|.++..+++. +.+++++|+++.+++.|+++.. .+.++.+|+.+.++ + ..++||+
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 150 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDF 150 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCE
Confidence 569999999999999999986 5899999999999999987652 36888888744332 1 2578999
Q ss_pred EEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 117 AISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 117 Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
|++..... + ...++..+.++|+|||.+++..
T Consensus 151 I~~d~~~~---~-----------~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 151 GFVDADKP---N-----------YIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEECSCGG---G-----------HHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCchH---H-----------HHHHHHHHHHhcCCCeEEEEec
Confidence 99763321 1 5688999999999999999863
No 233
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.28 E-value=1.3e-12 Score=113.56 Aligned_cols=95 Identities=20% Similarity=0.125 Sum_probs=76.3
Q ss_pred CCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCC---CCCCC--CcccEE
Q 043626 52 PRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALERE------VEGDLLLGDMGQG---LGLRP--GVVDGA 117 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~---~~~~~--~~fD~V 117 (291)
+.+|||||||+|.++..++.. +..++++|+|+.+++.|+++. ..+.++.+|+.+. +++.. ++||+|
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 569999999999999999986 479999999999999998764 2378888886432 22223 789999
Q ss_pred EECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 118 ISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 118 is~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
++...... ...++..+.++|+|||.+++.
T Consensus 153 ~~d~~~~~--------------~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 153 FIDADKRN--------------YPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp EECSCGGG--------------HHHHHHHHHHTEEEEEEEEEE
T ss_pred EECCCHHH--------------HHHHHHHHHHHcCCCeEEEEe
Confidence 98654221 567899999999999999996
No 234
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.27 E-value=2.8e-12 Score=110.50 Aligned_cols=95 Identities=18% Similarity=0.149 Sum_probs=76.1
Q ss_pred CCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCCC-CC----CCcccEE
Q 043626 52 PRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGLG-LR----PGVVDGA 117 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~~-~~----~~~fD~V 117 (291)
+.+|||||||+|.++..++.. +..++++|+++.+++.|+++. ..+.++.+|+.+.++ +. .++||+|
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v 149 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVA 149 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEE
Confidence 679999999999999999986 579999999999999998764 347888888743222 11 1789999
Q ss_pred EECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 118 ISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 118 is~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
++...... ...++..+.++|+|||.+++.
T Consensus 150 ~~d~~~~~--------------~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 150 VVDADKEN--------------CSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp EECSCSTT--------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCHHH--------------HHHHHHHHHHHcCCCeEEEEE
Confidence 98644211 567899999999999999985
No 235
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.26 E-value=2.9e-11 Score=109.35 Aligned_cols=86 Identities=17% Similarity=0.220 Sum_probs=68.1
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLGL 109 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~~ 109 (291)
.+.+.+++.+.+.+ +.+|||||||+|.++..|++.+..|+|+|+|+.|++.++++. .++.++.+|+.. +++
T Consensus 29 ~i~~~i~~~~~~~~---~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~-~~~ 104 (299)
T 2h1r_A 29 GILDKIIYAAKIKS---SDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIK-TVF 104 (299)
T ss_dssp HHHHHHHHHHCCCT---TCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCS-SCC
T ss_pred HHHHHHHHhcCCCC---cCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhh-CCc
Confidence 56778888887765 679999999999999999999999999999999999998764 357888999843 443
Q ss_pred CCCcccEEEECCchhhh
Q 043626 110 RPGVVDGAISISAVQWL 126 (291)
Q Consensus 110 ~~~~fD~Vis~~~l~~l 126 (291)
++||+|+++...++.
T Consensus 105 --~~~D~Vv~n~py~~~ 119 (299)
T 2h1r_A 105 --PKFDVCTANIPYKIS 119 (299)
T ss_dssp --CCCSEEEEECCGGGH
T ss_pred --ccCCEEEEcCCcccc
Confidence 489999998776653
No 236
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.26 E-value=4.2e-11 Score=108.15 Aligned_cols=87 Identities=21% Similarity=0.280 Sum_probs=75.2
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC---CcceEEEccCCCCCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE---VEGDLLLGDMGQGLGLRP 111 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~---~~~~~~~~D~~~~~~~~~ 111 (291)
.+.+++++.+.+.+ +..|||||||+|.++..|++.+..|+|||+++.|++.++++. .++.++++|+. .++++.
T Consensus 37 ~i~~~Iv~~l~~~~---~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l-~~~~~~ 112 (295)
T 3gru_A 37 NFVNKAVESANLTK---DDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDAL-KVDLNK 112 (295)
T ss_dssp HHHHHHHHHTTCCT---TCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTT-TSCGGG
T ss_pred HHHHHHHHhcCCCC---cCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhccCCCeEEEECchh-hCCccc
Confidence 57788888888776 679999999999999999999999999999999999998876 56899999984 456666
Q ss_pred CcccEEEECCchhh
Q 043626 112 GVVDGAISISAVQW 125 (291)
Q Consensus 112 ~~fD~Vis~~~l~~ 125 (291)
.+||.|+++..+++
T Consensus 113 ~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 113 LDFNKVVANLPYQI 126 (295)
T ss_dssp SCCSEEEEECCGGG
T ss_pred CCccEEEEeCcccc
Confidence 78999999866654
No 237
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.26 E-value=5e-11 Score=114.57 Aligned_cols=127 Identities=16% Similarity=0.190 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHhCCC--CCCCCCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcC-----CcceEEEcc
Q 043626 33 QAKLSERALELLALP--DDGVPRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALERE-----VEGDLLLGD 102 (291)
Q Consensus 33 q~~~~~~~lelL~~~--~~~~~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D 102 (291)
|...+..+..+|... + +.+|||+|||+|..+..|++. ...|+++|+|+.+++.++++. .++.++++|
T Consensus 100 Qd~~s~l~~~~L~~~~~~---g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D 176 (479)
T 2frx_A 100 QEASSMLPVAALFADGNA---PQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFD 176 (479)
T ss_dssp CCHHHHHHHHHHTTTTCC---CSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCC
T ss_pred ECHHHHHHHHHhCcccCC---CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 334444455666655 4 679999999999999999986 279999999999999998874 247788888
Q ss_pred CCCCCCC-CCCcccEEEECC---chhhhc-cccccC-CchH------HHHHHHHHHHHHhccCCcEEEEEEcC
Q 043626 103 MGQGLGL-RPGVVDGAISIS---AVQWLC-NADKAS-HEPR------LRLKAFFGSLYRCLARGARAVFQIYP 163 (291)
Q Consensus 103 ~~~~~~~-~~~~fD~Vis~~---~l~~l~-~~~~~~-~~p~------~~l~~~l~~l~~~LkpgG~lv~~~~~ 163 (291)
+.. ++. .+++||.|++.. ....+. +++... ..+. .....+|..+.++|||||++++++..
T Consensus 177 ~~~-~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 177 GRV-FGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp STT-HHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred HHH-hhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 744 332 457899999842 222221 122111 1111 11357899999999999999998764
No 238
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.25 E-value=8.9e-12 Score=125.00 Aligned_cols=128 Identities=15% Similarity=0.073 Sum_probs=91.7
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcC-------CcceEEEccCCCCCCCCCCcccEEEECCch
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALERE-------VEGDLLLGDMGQGLGLRPGVVDGAISISAV 123 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~-------~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l 123 (291)
+.+|||+|||+|.++..++..| .+|++||+|+.+++.|+++. ..+.++++|+.+.++...++||+|++....
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~ 619 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPT 619 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCS
T ss_pred CCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCcc
Confidence 5699999999999999999887 56999999999999999864 147899999855445456899999987432
Q ss_pred hhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCC
Q 043626 124 QWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFA 182 (291)
Q Consensus 124 ~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~ 182 (291)
.-.........+....+..++..+.++|+|||.+++........ .-...+.+.||.
T Consensus 620 f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~---~~~~~l~~~g~~ 675 (703)
T 3v97_A 620 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFR---MDLDGLAKLGLK 675 (703)
T ss_dssp BC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCC---CCHHHHHHTTEE
T ss_pred ccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccc---cCHHHHHHcCCc
Confidence 10000000112334557889999999999999999988652211 113456677776
No 239
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.24 E-value=1.9e-11 Score=114.72 Aligned_cols=130 Identities=17% Similarity=0.059 Sum_probs=94.4
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcC------C-cceEEEccCCCCCCC---CCCcccEEEEC
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALERE------V-EGDLLLGDMGQGLGL---RPGVVDGAISI 120 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~------~-~~~~~~~D~~~~~~~---~~~~fD~Vis~ 120 (291)
+.+|||+|||+|.++..++..| ..|+|+|+|+.+++.|+++. . ++.++.+|+.+.++. ..++||+|++.
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~d 300 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMD 300 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEEC
Confidence 6799999999999999999997 69999999999999998763 2 578999997543221 14689999987
Q ss_pred CchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChH---HHHHHHHHHHHcCCCC
Q 043626 121 SAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVA---QRELILGAAMRAGFAG 183 (291)
Q Consensus 121 ~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~---~~~~i~~~~~~aGF~~ 183 (291)
....... .....+....+..++..+.++|+|||.+++...+.... -.+.+...+.++|+.-
T Consensus 301 pP~~~~~--~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 364 (396)
T 3c0k_A 301 PPKFVEN--KSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDV 364 (396)
T ss_dssp CSSTTTC--SSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCE
T ss_pred CCCCCCC--hhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeE
Confidence 4321110 01111122336789999999999999999988765432 2445556778888754
No 240
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.24 E-value=2.6e-11 Score=111.55 Aligned_cols=136 Identities=19% Similarity=0.165 Sum_probs=95.7
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-------CeEEEEeCCHHHHHHHHhcC----CcceEEEccCCCCCCCCCCcccEEEEC
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-------HQWIGLDISQSMLNIALERE----VEGDLLLGDMGQGLGLRPGVVDGAISI 120 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-------~~v~gvDis~~ml~~a~~~~----~~~~~~~~D~~~~~~~~~~~fD~Vis~ 120 (291)
+.+|||+|||+|.++..+++.. ..++|+|+++.+++.|+.+. ..+.++++|.... ...+.||+|+++
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~--~~~~~fD~Ii~N 208 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN--LLVDPVDVVISD 208 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC--CCCCCEEEEEEE
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCc--cccCCccEEEEC
Confidence 5799999999999998888653 68999999999999998764 2478899997542 346789999999
Q ss_pred Cchhhhcccccc-CCch-----HH-HHHHHHHHHHHhccCCcEEEEEEcCC--ChHHHHHHHHHHHHcCCCCcEEEeCC
Q 043626 121 SAVQWLCNADKA-SHEP-----RL-RLKAFFGSLYRCLARGARAVFQIYPE--SVAQRELILGAAMRAGFAGGVVVDYP 190 (291)
Q Consensus 121 ~~l~~l~~~~~~-~~~p-----~~-~l~~~l~~l~~~LkpgG~lv~~~~~~--~~~~~~~i~~~~~~aGF~~~~~~~~p 190 (291)
..+.++...+.. .+.+ .. ....++..+.+.|+|||++++.+... ...+...+...+.+.|+.. .++..|
T Consensus 209 PPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~~~-~ii~lp 286 (344)
T 2f8l_A 209 LPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIE-GIIKLP 286 (344)
T ss_dssp CCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEEEE-EEEECC
T ss_pred CCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCeEE-EeeeCC
Confidence 887765432100 0111 00 12368999999999999999887211 1123466777777777643 334544
No 241
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.23 E-value=5.5e-11 Score=111.65 Aligned_cols=138 Identities=17% Similarity=0.199 Sum_probs=96.3
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRP 111 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~ 111 (291)
.+++.+++++.... +.+|||+|||+|.++..+++. +..++|+|+++.+++.| ..+.++++|+... . ..
T Consensus 26 ~l~~~~~~~~~~~~---~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----~~~~~~~~D~~~~-~-~~ 96 (421)
T 2ih2_A 26 EVVDFMVSLAEAPR---GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----PWAEGILADFLLW-E-PG 96 (421)
T ss_dssp HHHHHHHHHCCCCT---TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----TTEEEEESCGGGC-C-CS
T ss_pred HHHHHHHHhhccCC---CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----CCCcEEeCChhhc-C-cc
Confidence 45667777776543 569999999999999999974 47999999999998877 4578999998543 2 24
Q ss_pred CcccEEEECCchhhhccccc-c--CCchHH---------------HHHHHHHHHHHhccCCcEEEEEEcCC--ChHHHHH
Q 043626 112 GVVDGAISISAVQWLCNADK-A--SHEPRL---------------RLKAFFGSLYRCLARGARAVFQIYPE--SVAQREL 171 (291)
Q Consensus 112 ~~fD~Vis~~~l~~l~~~~~-~--~~~p~~---------------~l~~~l~~l~~~LkpgG~lv~~~~~~--~~~~~~~ 171 (291)
+.||+||++..+........ . .....+ ....|+..+.++|+|||++++.+... .......
T Consensus 97 ~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~ 176 (421)
T 2ih2_A 97 EAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFAL 176 (421)
T ss_dssp SCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHH
T ss_pred CCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHH
Confidence 78999999854432211000 0 000111 13478999999999999999987432 1124456
Q ss_pred HHHHHHHcCC
Q 043626 172 ILGAAMRAGF 181 (291)
Q Consensus 172 i~~~~~~aGF 181 (291)
+.+.+.+.|+
T Consensus 177 lr~~l~~~~~ 186 (421)
T 2ih2_A 177 LREFLAREGK 186 (421)
T ss_dssp HHHHHHHHSE
T ss_pred HHHHHHhcCC
Confidence 7778888887
No 242
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.22 E-value=7.9e-11 Score=102.77 Aligned_cols=95 Identities=21% Similarity=0.152 Sum_probs=76.5
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC----CcceEEEccCCCCCCCCCCcccEEEECCchhhhc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE----VEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLC 127 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~----~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~ 127 (291)
+.+|||||||+|.++..+. ....++|+||++.|++.++++. ....+.++|.... + .+++||+|+++-++|+|.
T Consensus 106 p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~-~-~~~~~DvvLllk~lh~LE 182 (253)
T 3frh_A 106 PRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCA-P-PAEAGDLALIFKLLPLLE 182 (253)
T ss_dssp CSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTS-C-CCCBCSEEEEESCHHHHH
T ss_pred CCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccC-C-CCCCcchHHHHHHHHHhh
Confidence 7799999999999999988 5589999999999999998874 4467888998543 3 367999999999999996
Q ss_pred cccccCCchHHHHHHHHHHHHHhccCCcEEEE
Q 043626 128 NADKASHEPRLRLKAFFGSLYRCLARGARAVF 159 (291)
Q Consensus 128 ~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~ 159 (291)
+..+ ...+ .+...|++++.+|-
T Consensus 183 ~q~~---------~~~~-~ll~aL~~~~vvVs 204 (253)
T 3frh_A 183 REQA---------GSAM-ALLQSLNTPRMAVS 204 (253)
T ss_dssp HHST---------THHH-HHHHHCBCSEEEEE
T ss_pred hhch---------hhHH-HHHHHhcCCCEEEE
Confidence 6332 1333 77779999987664
No 243
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.22 E-value=1.8e-11 Score=114.33 Aligned_cols=130 Identities=15% Similarity=-0.036 Sum_probs=92.8
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCCC---CCCcccEEEECCch
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLGL---RPGVVDGAISISAV 123 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~~---~~~~fD~Vis~~~l 123 (291)
+.+|||+|||+|.++..++..+..|+|+|+|+.+++.|+++. .++.++++|+.+.++. ..++||+|++....
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~ 289 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPA 289 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred CCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCCC
Confidence 679999999999999999988889999999999999998874 2378999997543221 25689999986332
Q ss_pred hhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHH---HHHHHHHHHHcCCCC
Q 043626 124 QWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQ---RELILGAAMRAGFAG 183 (291)
Q Consensus 124 ~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~---~~~i~~~~~~aGF~~ 183 (291)
... + ......-...+..++..+.++|+|||.+++...+..... ...+...+.++|..-
T Consensus 290 ~~~-~-~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 350 (382)
T 1wxx_A 290 FAK-G-KKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLL 350 (382)
T ss_dssp SCC-S-TTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCE
T ss_pred CCC-C-hhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeE
Confidence 110 0 000111223367899999999999999999887643322 345556677777543
No 244
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.21 E-value=4.7e-12 Score=121.02 Aligned_cols=132 Identities=14% Similarity=0.070 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--C-CeEEEEeCCHHHHHHHHhcCC----cceEEEccCCC
Q 043626 33 QAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--G-HQWIGLDISQSMLNIALEREV----EGDLLLGDMGQ 105 (291)
Q Consensus 33 q~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g-~~v~gvDis~~ml~~a~~~~~----~~~~~~~D~~~ 105 (291)
|...+..+..+|...+ +.+|||+|||+|..+..|++. + ..|+++|+|+.+++.++++.. .+.++++|+..
T Consensus 86 Qd~ss~l~a~~L~~~~---g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~ 162 (464)
T 3m6w_A 86 QEPSAQAVGVLLDPKP---GERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRA 162 (464)
T ss_dssp CCTTTHHHHHHHCCCT---TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHH
T ss_pred ECHHHHHHHHhcCcCC---CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHH
Confidence 3333445556666665 789999999999999999976 2 689999999999999988743 26778888643
Q ss_pred CCCCCCCcccEEEECCc---hhhh-ccccccCC-ch------HHHHHHHHHHHHHhccCCcEEEEEEcCCChH
Q 043626 106 GLGLRPGVVDGAISISA---VQWL-CNADKASH-EP------RLRLKAFFGSLYRCLARGARAVFQIYPESVA 167 (291)
Q Consensus 106 ~~~~~~~~fD~Vis~~~---l~~l-~~~~~~~~-~p------~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~ 167 (291)
...+.+++||+|++... ...+ .+++.... .+ ......++..+.++|+|||++++++..-.++
T Consensus 163 l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~e 235 (464)
T 3m6w_A 163 LAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPE 235 (464)
T ss_dssp HHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGG
T ss_pred hhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchh
Confidence 22223679999996422 1111 11111100 01 1113678999999999999999987654433
No 245
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.20 E-value=3.1e-11 Score=110.89 Aligned_cols=108 Identities=10% Similarity=0.061 Sum_probs=82.0
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCCCCCCCcccEEEECCchhh
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGLGLRPGVVDGAISISAVQW 125 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~ 125 (291)
+.+|||+|||+|.++.. +..+..|+|+|+|+.+++.|+++. ..+.++++|+.+.+ ++||+|+++....
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----~~fD~Vi~dpP~~- 269 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----VKGNRVIMNLPKF- 269 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----CCEEEEEECCTTT-
T ss_pred CCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----CCCcEEEECCcHh-
Confidence 67999999999999999 886689999999999999998864 24789999985433 7899999863221
Q ss_pred hccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHc-CCC
Q 043626 126 LCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRA-GFA 182 (291)
Q Consensus 126 l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~a-GF~ 182 (291)
...++..+.++|+|||.+++..+... ...+.+.+..+ ||.
T Consensus 270 --------------~~~~l~~~~~~L~~gG~l~~~~~~~~---~~~~~~~l~~~~~~~ 310 (336)
T 2yx1_A 270 --------------AHKFIDKALDIVEEGGVIHYYTIGKD---FDKAIKLFEKKCDCE 310 (336)
T ss_dssp --------------GGGGHHHHHHHEEEEEEEEEEEEESS---SHHHHHHHHHHSEEE
T ss_pred --------------HHHHHHHHHHHcCCCCEEEEEEeecC---chHHHHHHHHhcCCc
Confidence 22678899999999999988654333 23344445555 554
No 246
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.20 E-value=2.7e-11 Score=115.61 Aligned_cols=140 Identities=12% Similarity=0.049 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcCC-----cceEEEccCC
Q 043626 33 QAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALEREV-----EGDLLLGDMG 104 (291)
Q Consensus 33 q~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~~-----~~~~~~~D~~ 104 (291)
|...+..+..+|...+ +.+|||+|||+|..+..|++. ...|+++|+|+.+++.++++.. ++.++++|+.
T Consensus 90 Qd~ss~l~~~~L~~~~---g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~ 166 (456)
T 3m4x_A 90 QEPSAMIVGTAAAAKP---GEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPA 166 (456)
T ss_dssp CCTTTHHHHHHHCCCT---TCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHH
T ss_pred ECHHHHHHHHHcCCCC---CCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHH
Confidence 3344445566666655 789999999999999999876 2699999999999999988642 4677778863
Q ss_pred CCCCCCCCcccEEEECCc---hhhhccccccCCchHH--------------HHHHHHHHHHHhccCCcEEEEEEcCCChH
Q 043626 105 QGLGLRPGVVDGAISISA---VQWLCNADKASHEPRL--------------RLKAFFGSLYRCLARGARAVFQIYPESVA 167 (291)
Q Consensus 105 ~~~~~~~~~fD~Vis~~~---l~~l~~~~~~~~~p~~--------------~l~~~l~~l~~~LkpgG~lv~~~~~~~~~ 167 (291)
....+.+++||+|++... ...+. .+|.. ....++..+.++|+|||++++++..-+++
T Consensus 167 ~l~~~~~~~FD~Il~DaPCSg~G~~r------r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~e 240 (456)
T 3m4x_A 167 ELVPHFSGFFDRIVVDAPCSGEGMFR------KDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPE 240 (456)
T ss_dssp HHHHHHTTCEEEEEEECCCCCGGGTT------TCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGG
T ss_pred HhhhhccccCCEEEECCCCCCccccc------cCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccc
Confidence 322223579999998532 11110 11221 12478999999999999999987654433
Q ss_pred H-HHHHHHHHHHcCC
Q 043626 168 Q-RELILGAAMRAGF 181 (291)
Q Consensus 168 ~-~~~i~~~~~~aGF 181 (291)
+ .+.+...+.+.+|
T Consensus 241 Ene~vv~~~l~~~~~ 255 (456)
T 3m4x_A 241 ENEEIISWLVENYPV 255 (456)
T ss_dssp GTHHHHHHHHHHSSE
T ss_pred cCHHHHHHHHHhCCC
Confidence 3 3334444555554
No 247
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.19 E-value=4.2e-11 Score=105.58 Aligned_cols=120 Identities=13% Similarity=0.085 Sum_probs=89.3
Q ss_pred CCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcC----CcceEEEccCCCCCCCCCCcccEEEECCchhh
Q 043626 52 PRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALERE----VEGDLLLGDMGQGLGLRPGVVDGAISISAVQW 125 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~----~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~ 125 (291)
+.+|||||||+|.++..+.... ..|+++||++.|++.++++. ....+.+.|+.... +++.||+|+++-++++
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~--p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR--LDEPADVTLLLKTLPC 210 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC--CCSCCSEEEETTCHHH
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC--CCCCcchHHHHHHHHH
Confidence 6799999999999999998773 79999999999999999875 34678888875433 4789999999999999
Q ss_pred hccccccCCchHHHHHHHHHHHHHhccCCcEEEEE----EcCCCh----HHHHHHHHHHHHcCCCC
Q 043626 126 LCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ----IYPESV----AQRELILGAAMRAGFAG 183 (291)
Q Consensus 126 l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~----~~~~~~----~~~~~i~~~~~~aGF~~ 183 (291)
|.+..+ ...| .+...|+++|.+|-- +.+.+. .....+.+.+...|...
T Consensus 211 Le~q~k---------g~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~ 266 (281)
T 3lcv_B 211 LETQQR---------GSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRI 266 (281)
T ss_dssp HHHHST---------THHH-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCE
T ss_pred hhhhhh---------HHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCce
Confidence 966322 2455 899999999988742 211211 23445566666677753
No 248
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.18 E-value=2.4e-11 Score=113.95 Aligned_cols=129 Identities=16% Similarity=0.073 Sum_probs=90.5
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCC---CCCcccEEEECC
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGL---RPGVVDGAISIS 121 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~---~~~~fD~Vis~~ 121 (291)
+.+|||+|||+|.++..++..| ..|+|+|+|+.+++.|+++.. .+.++++|+.+.++. ..++||+|++..
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dp 297 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDP 297 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEECC
Confidence 6799999999999999999986 599999999999999988652 578999997443221 256899999864
Q ss_pred chhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCCh--H-HHHHHHHHHHHcCCC
Q 043626 122 AVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESV--A-QRELILGAAMRAGFA 182 (291)
Q Consensus 122 ~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~--~-~~~~i~~~~~~aGF~ 182 (291)
...... ......-...+..++..+.++|+|||.+++....... . -...+...+..+|..
T Consensus 298 P~~~~~--~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~ 359 (396)
T 2as0_A 298 PAFVQH--EKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKF 359 (396)
T ss_dssp CCSCSS--GGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEE
T ss_pred CCCCCC--HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCe
Confidence 321110 0001111233678999999999999999988765432 2 233444556666543
No 249
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.15 E-value=6.3e-10 Score=105.39 Aligned_cols=107 Identities=18% Similarity=0.158 Sum_probs=79.4
Q ss_pred HHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC----cceEEEccCCCCCCC
Q 043626 34 AKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV----EGDLLLGDMGQGLGL 109 (291)
Q Consensus 34 ~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~----~~~~~~~D~~~~~~~ 109 (291)
..+.+.+++ +.. +.+|||+|||+|.++..|++.+..|+|+|+|+.|++.|+++.. .+.++.+|+.+.++
T Consensus 279 e~l~~~~~~---~~~---~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~- 351 (425)
T 2jjq_A 279 VNLVRKVSE---LVE---GEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSV- 351 (425)
T ss_dssp HHHHHHHHH---HCC---SSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC-
T ss_pred HHHHHHhhc---cCC---CCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc-
Confidence 345555555 233 5699999999999999999999999999999999999988653 27899999865432
Q ss_pred CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC
Q 043626 110 RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP 163 (291)
Q Consensus 110 ~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~ 163 (291)
.+||+|+++.....+ ...++..+. .|+|+|.++++..|
T Consensus 352 --~~fD~Vv~dPPr~g~-------------~~~~~~~l~-~l~p~givyvsc~p 389 (425)
T 2jjq_A 352 --KGFDTVIVDPPRAGL-------------HPRLVKRLN-REKPGVIVYVSCNP 389 (425)
T ss_dssp --TTCSEEEECCCTTCS-------------CHHHHHHHH-HHCCSEEEEEESCH
T ss_pred --cCCCEEEEcCCccch-------------HHHHHHHHH-hcCCCcEEEEECCh
Confidence 289999986432111 123455554 48999999998743
No 250
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.14 E-value=4.7e-13 Score=117.44 Aligned_cols=82 Identities=16% Similarity=0.254 Sum_probs=66.9
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC---CcceEEEccCCCCCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE---VEGDLLLGDMGQGLGLRP 111 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~---~~~~~~~~D~~~~~~~~~ 111 (291)
.+.+.+++.+.+.+ +.+|||||||+|.++..|++.+.+++|+|+|+.|++.|+++. ..+.++++|+. .+++..
T Consensus 16 ~~~~~i~~~~~~~~---~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~-~~~~~~ 91 (245)
T 1yub_A 16 KVLNQIIKQLNLKE---TDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDIL-QFQFPN 91 (245)
T ss_dssp TTHHHHHHHCCCCS---SEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCT-TTTCCC
T ss_pred HHHHHHHHhcCCCC---CCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhccCCceEEEECChh-hcCccc
Confidence 34667788887765 679999999999999999999999999999999999988775 35788999984 456553
Q ss_pred -CcccEEEECC
Q 043626 112 -GVVDGAISIS 121 (291)
Q Consensus 112 -~~fD~Vis~~ 121 (291)
++| .||++.
T Consensus 92 ~~~f-~vv~n~ 101 (245)
T 1yub_A 92 KQRY-KIVGNI 101 (245)
T ss_dssp SSEE-EEEEEC
T ss_pred CCCc-EEEEeC
Confidence 688 777764
No 251
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.13 E-value=1.7e-10 Score=103.31 Aligned_cols=115 Identities=15% Similarity=0.109 Sum_probs=87.6
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCCCCCcccEEEECCchh
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGLRPGVVDGAISISAVQ 124 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~ 124 (291)
+..|||+|||+|.++..++..| ..|+++|+|+.+++.++++.. .+.++++|..+.. ..+.||.|+++....
T Consensus 126 g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~--~~~~~D~Vi~~~p~~ 203 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP--GENIADRILMGYVVR 203 (278)
T ss_dssp TCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC--CCSCEEEEEECCCSS
T ss_pred CCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc--cccCCCEEEECCCCc
Confidence 6799999999999999999888 699999999999999988652 2688899985432 257899999873321
Q ss_pred hhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc-CCC---hHHHHHHHHHHHHcCCCC
Q 043626 125 WLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY-PES---VAQRELILGAAMRAGFAG 183 (291)
Q Consensus 125 ~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~-~~~---~~~~~~i~~~~~~aGF~~ 183 (291)
...++..+.++|++||.+.+... ++. ....+.+...+...|+..
T Consensus 204 ---------------~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v 251 (278)
T 3k6r_A 204 ---------------THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDV 251 (278)
T ss_dssp ---------------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEE
T ss_pred ---------------HHHHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcE
Confidence 13577788899999999876432 221 234566777888899874
No 252
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.12 E-value=5.4e-10 Score=98.81 Aligned_cols=84 Identities=11% Similarity=0.135 Sum_probs=69.3
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC---CcceEEEccCCCCCCCC-
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE---VEGDLLLGDMGQGLGLR- 110 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~---~~~~~~~~D~~~~~~~~- 110 (291)
.+.+.+++.+.+.+ +..|||||||+|.++..|++.+.+|+|+|+++.|++.++++. .++.++++|+.. +++.
T Consensus 16 ~i~~~iv~~~~~~~---~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~-~~~~~ 91 (255)
T 3tqs_A 16 FVLQKIVSAIHPQK---TDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQ-FDFSS 91 (255)
T ss_dssp HHHHHHHHHHCCCT---TCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTT-CCGGG
T ss_pred HHHHHHHHhcCCCC---cCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHh-CCHHH
Confidence 56778888888776 679999999999999999999999999999999999999876 457899999844 4443
Q ss_pred ---CCcccEEEECCch
Q 043626 111 ---PGVVDGAISISAV 123 (291)
Q Consensus 111 ---~~~fD~Vis~~~l 123 (291)
.++|| ||+|...
T Consensus 92 ~~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 92 VKTDKPLR-VVGNLPY 106 (255)
T ss_dssp SCCSSCEE-EEEECCH
T ss_pred hccCCCeE-EEecCCc
Confidence 35688 7777443
No 253
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.12 E-value=4.9e-10 Score=98.29 Aligned_cols=85 Identities=12% Similarity=0.133 Sum_probs=68.6
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC---cceEEEccCCCCCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV---EGDLLLGDMGQGLGLRP 111 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~---~~~~~~~D~~~~~~~~~ 111 (291)
.+.+.+++.+.+.+ +.+|||||||+|.++..|++.+..++|+|+|+.|++.++++.. ++.++++|+. .+++..
T Consensus 17 ~~~~~i~~~~~~~~---~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~-~~~~~~ 92 (244)
T 1qam_A 17 HNIDKIMTNIRLNE---HDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDIL-QFKFPK 92 (244)
T ss_dssp HHHHHHHTTCCCCT---TCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGG-GCCCCS
T ss_pred HHHHHHHHhCCCCC---CCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccCCCeEEEEChHH-hCCccc
Confidence 56777888877665 6799999999999999999999999999999999999998763 5789999984 456653
Q ss_pred -CcccEEEECCchh
Q 043626 112 -GVVDGAISISAVQ 124 (291)
Q Consensus 112 -~~fD~Vis~~~l~ 124 (291)
..| .||++..++
T Consensus 93 ~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 93 NQSY-KIFGNIPYN 105 (244)
T ss_dssp SCCC-EEEEECCGG
T ss_pred CCCe-EEEEeCCcc
Confidence 355 567765544
No 254
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.08 E-value=4.2e-10 Score=100.37 Aligned_cols=84 Identities=13% Similarity=0.027 Sum_probs=70.5
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC--cceEEEccCCCCCCCCC-
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV--EGDLLLGDMGQGLGLRP- 111 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~--~~~~~~~D~~~~~~~~~- 111 (291)
.+.+++++.+.+.+ + .|||||||+|.++..|++.+.+|+|+|+++.|++.++++.. ++.++++|+. .+++..
T Consensus 34 ~i~~~Iv~~~~~~~---~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l-~~~~~~~ 108 (271)
T 3fut_A 34 AHLRRIVEAARPFT---G-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDAL-LYPWEEV 108 (271)
T ss_dssp HHHHHHHHHHCCCC---S-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTTSSEEEEESCGG-GSCGGGS
T ss_pred HHHHHHHHhcCCCC---C-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCCEEEEECChh-hCChhhc
Confidence 56788888888876 7 99999999999999999999999999999999999998865 4789999984 345543
Q ss_pred CcccEEEECCch
Q 043626 112 GVVDGAISISAV 123 (291)
Q Consensus 112 ~~fD~Vis~~~l 123 (291)
..+|.||+|...
T Consensus 109 ~~~~~iv~NlPy 120 (271)
T 3fut_A 109 PQGSLLVANLPY 120 (271)
T ss_dssp CTTEEEEEEECS
T ss_pred cCccEEEecCcc
Confidence 268999988544
No 255
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.07 E-value=2.2e-09 Score=99.95 Aligned_cols=130 Identities=14% Similarity=0.061 Sum_probs=88.8
Q ss_pred CCeEEEEcCCCchhHHHHHHc-------------------CCeEEEEeCC-----------HHHHHHHHhcCC---cceE
Q 043626 52 PRLLLDIGCGSGLSGETLSEN-------------------GHQWIGLDIS-----------QSMLNIALEREV---EGDL 98 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~-------------------g~~v~gvDis-----------~~ml~~a~~~~~---~~~~ 98 (291)
+.+|+|+||++|..+..+... ...|+..|+. +.+.+.+.+... ..-|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 468999999999988777643 1467888987 555554433221 2345
Q ss_pred EEccCCCC--CCCCCCcccEEEECCchhhhccccccCC-----------------chH-----------HHHHHHHHHHH
Q 043626 99 LLGDMGQG--LGLRPGVVDGAISISAVQWLCNADKASH-----------------EPR-----------LRLKAFFGSLY 148 (291)
Q Consensus 99 ~~~D~~~~--~~~~~~~fD~Vis~~~l~~l~~~~~~~~-----------------~p~-----------~~l~~~l~~l~ 148 (291)
+.+..+.. ..|+.++||+|+|+++|||+.+...... .|. +++..||+..+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55654442 3588999999999999999976432211 122 23567799999
Q ss_pred HhccCCcEEEEEEcCCChH--------HHHHHHHHHHHcCC
Q 043626 149 RCLARGARAVFQIYPESVA--------QRELILGAAMRAGF 181 (291)
Q Consensus 149 ~~LkpgG~lv~~~~~~~~~--------~~~~i~~~~~~aGF 181 (291)
+.|+|||++++.+...... .+......+...|.
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGl 253 (384)
T 2efj_A 213 EELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGH 253 (384)
T ss_dssp HHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTS
T ss_pred HHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCC
Confidence 9999999999998775443 55555555556665
No 256
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.05 E-value=9.3e-10 Score=102.34 Aligned_cols=145 Identities=17% Similarity=0.199 Sum_probs=85.2
Q ss_pred hccccccchhH----HHHHHHHHHHHHHhCCCC--CCCCCeEEEEcCCCchhHHHHHH--------c---------CCeE
Q 043626 20 ARKYTSSSRII----DIQAKLSERALELLALPD--DGVPRLLLDIGCGSGLSGETLSE--------N---------GHQW 76 (291)
Q Consensus 20 a~~Y~~~~~~~----~iq~~~~~~~lelL~~~~--~~~~~~VLDiGcGsG~~~~~L~~--------~---------g~~v 76 (291)
...|+.++..+ .....+.+.+++.|.... ...+.+|+|+|||+|..+..+.. . ...|
T Consensus 15 ~~sY~~nS~~Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v 94 (374)
T 3b5i_A 15 QDSYANNSLAQAMHARSMLHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTA 94 (374)
T ss_dssp -----------CTTHHHHHHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEE
T ss_pred cchHHHhhHHHHHHHHHHHHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeE
Confidence 34576665533 223456666666665542 11257999999999998887731 1 2567
Q ss_pred EEEeCCHHHHHHHHhcCCc-----------------ceEEEccCCC--CCCCCCCcccEEEECCchhhhccccccCC---
Q 043626 77 IGLDISQSMLNIALEREVE-----------------GDLLLGDMGQ--GLGLRPGVVDGAISISAVQWLCNADKASH--- 134 (291)
Q Consensus 77 ~gvDis~~ml~~a~~~~~~-----------------~~~~~~D~~~--~~~~~~~~fD~Vis~~~l~~l~~~~~~~~--- 134 (291)
+..|+....-...-...+. .-|+.+..+. .-.|+.++||+|+|+.+|||+.+......
T Consensus 95 ~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~ 174 (374)
T 3b5i_A 95 FFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRR 174 (374)
T ss_dssp EEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTT
T ss_pred EecCCCccchHHHHhhhhhhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccc
Confidence 8888766553322221111 1233333222 23578999999999999999975332110
Q ss_pred --------------ch----------HHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 043626 135 --------------EP----------RLRLKAFFGSLYRCLARGARAVFQIYPE 164 (291)
Q Consensus 135 --------------~p----------~~~l~~~l~~l~~~LkpgG~lv~~~~~~ 164 (291)
.| .+++..||+..++.|+|||++++++...
T Consensus 175 ~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr 228 (374)
T 3b5i_A 175 SAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGR 228 (374)
T ss_dssp STTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred cccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 11 2346778999999999999999988754
No 257
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=99.03 E-value=2.4e-09 Score=94.79 Aligned_cols=130 Identities=15% Similarity=0.127 Sum_probs=85.7
Q ss_pred CCeEEEEcCCCchhHHHHHHc-C-CeEEEEeCCHHHHHHHHhc---CCcceEEEccCCCCCCCCCCcccEEEECCchh--
Q 043626 52 PRLLLDIGCGSGLSGETLSEN-G-HQWIGLDISQSMLNIALER---EVEGDLLLGDMGQGLGLRPGVVDGAISISAVQ-- 124 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~-g-~~v~gvDis~~ml~~a~~~---~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~-- 124 (291)
...|||||||+|.++..+++. + ..++|+|++..+....... ..++..+..++ +...+..+.||+|+|..+.+
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~-dv~~l~~~~~DlVlsD~apnsG 153 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKT-DIHRLEPVKCDTLLCDIGESSS 153 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSC-CTTTSCCCCCSEEEECCCCCCS
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccc-eehhcCCCCccEEEecCccCcC
Confidence 569999999999999998876 4 5788899885431111110 01344556665 43567788999999987765
Q ss_pred --hhccccccCCchHHHHHHHHHHHHHhccCC-cEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeCCCCCC
Q 043626 125 --WLCNADKASHEPRLRLKAFFGSLYRCLARG-ARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSK 194 (291)
Q Consensus 125 --~l~~~~~~~~~p~~~l~~~l~~l~~~Lkpg-G~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~p~~~~ 194 (291)
|+.. .+...+|..+.++|+|| |.|++.++..-......+...+.+. |.. +.+.-| +.+
T Consensus 154 ~~~~D~---------~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk~~-F~~-V~~~KP-aSR 214 (277)
T 3evf_A 154 SSVTEG---------ERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQRR-FGG-TVIRNP-LSR 214 (277)
T ss_dssp CHHHHH---------HHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHH-HCC-EEECCT-TSC
T ss_pred chHHHH---------HHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHHHh-cCC-EEEEeC-CCC
Confidence 2211 11223478889999999 9999988762223444555555554 876 666777 544
No 258
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=99.02 E-value=1.6e-09 Score=100.12 Aligned_cols=146 Identities=18% Similarity=0.156 Sum_probs=96.8
Q ss_pred hhhccccccchhHHHH----HHHHHHHHHHhCCC--CCCCCCeEEEEcCCCchhHHHHHHc------------C------
Q 043626 18 TEARKYTSSSRIIDIQ----AKLSERALELLALP--DDGVPRLLLDIGCGSGLSGETLSEN------------G------ 73 (291)
Q Consensus 18 ~~a~~Y~~~~~~~~iq----~~~~~~~lelL~~~--~~~~~~~VLDiGcGsG~~~~~L~~~------------g------ 73 (291)
+-...|+.++.++... ..+.+.++..+... .+ .+.+|+|+||++|..+..+... +
T Consensus 13 ~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~-~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe 91 (359)
T 1m6e_X 13 AGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVT-TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPE 91 (359)
T ss_dssp TTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSSSS-SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCE
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCc
Confidence 3445688887654321 22333333332221 11 2678999999999877655432 1
Q ss_pred CeEEEEeCCHHHHHHHHhcCCc------ceEEEccCCC--CCCCCCCcccEEEECCchhhhccccccCC-----------
Q 043626 74 HQWIGLDISQSMLNIALEREVE------GDLLLGDMGQ--GLGLRPGVVDGAISISAVQWLCNADKASH----------- 134 (291)
Q Consensus 74 ~~v~gvDis~~ml~~a~~~~~~------~~~~~~D~~~--~~~~~~~~fD~Vis~~~l~~l~~~~~~~~----------- 134 (291)
..|+..|+..+....+-...+. .-|+.+..+. ...|+.+++|+|+|+.+|||+.+......
T Consensus 92 ~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~ 171 (359)
T 1m6e_X 92 YQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANT 171 (359)
T ss_dssp EEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSS
T ss_pred eEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCC
Confidence 5688999998888877766542 2455554433 24688999999999999999976332111
Q ss_pred -----------chHHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 043626 135 -----------EPRLRLKAFFGSLYRCLARGARAVFQIYPE 164 (291)
Q Consensus 135 -----------~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~ 164 (291)
--.+++..||+..++.|+|||++++.+...
T Consensus 172 ~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr 212 (359)
T 1m6e_X 172 CPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGR 212 (359)
T ss_dssp SCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecC
Confidence 013567889999999999999999988654
No 259
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.02 E-value=1.1e-09 Score=104.20 Aligned_cols=150 Identities=14% Similarity=0.132 Sum_probs=97.8
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc---------------CCeEEEEeCCHHHHHHHHhcC----C-
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN---------------GHQWIGLDISQSMLNIALERE----V- 94 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~---------------g~~v~gvDis~~ml~~a~~~~----~- 94 (291)
.+++.+++++.... +.+|||+|||+|.++..+++. +..++|+|+++.++..|+.+. .
T Consensus 158 ~v~~~mv~~l~~~~---~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~ 234 (445)
T 2okc_A 158 PLIQAMVDCINPQM---GETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG 234 (445)
T ss_dssp HHHHHHHHHHCCCT---TCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCC---CCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 45666777776544 679999999999998887763 368999999999999998753 1
Q ss_pred --cceEEEccCCCCCCCCCCcccEEEECCchhhhcccccc----C--CchHHHHHHHHHHHHHhccCCcEEEEEEcCC--
Q 043626 95 --EGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADKA----S--HEPRLRLKAFFGSLYRCLARGARAVFQIYPE-- 164 (291)
Q Consensus 95 --~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~----~--~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~-- 164 (291)
.+.+.++|.... +. .+.||+|+++..+......+.. . .........|+..+.++|+|||++++.+...
T Consensus 235 ~~~~~i~~gD~l~~-~~-~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~~L 312 (445)
T 2okc_A 235 TDRSPIVCEDSLEK-EP-STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDNVL 312 (445)
T ss_dssp SSCCSEEECCTTTS-CC-SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHH
T ss_pred cCCCCEeeCCCCCC-cc-cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCccc
Confidence 467889987443 22 3489999999776543221110 0 0000113478999999999999999876211
Q ss_pred -ChHHHHHHHHHHH-HcCCCCcEEEeCCC
Q 043626 165 -SVAQRELILGAAM-RAGFAGGVVVDYPH 191 (291)
Q Consensus 165 -~~~~~~~i~~~~~-~aGF~~~~~~~~p~ 191 (291)
.......+...+. ..++. .++..|.
T Consensus 313 ~~~~~~~~iR~~L~~~~~l~--~ii~lp~ 339 (445)
T 2okc_A 313 FEAGAGETIRKRLLQDFNLH--TILRLPT 339 (445)
T ss_dssp HCSTHHHHHHHHHHHHEEEE--EEEECCS
T ss_pred ccCcHHHHHHHHHHhcCcEE--EEEeCCC
Confidence 1113345555443 44343 3455553
No 260
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.02 E-value=1.1e-09 Score=101.08 Aligned_cols=125 Identities=13% Similarity=0.026 Sum_probs=86.2
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcCC-------------cceEEEccCCCCCCC---CCCcc
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALEREV-------------EGDLLLGDMGQGLGL---RPGVV 114 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~~-------------~~~~~~~D~~~~~~~---~~~~f 114 (291)
+.+||+||||+|.++..++.++ .+|++||+++.+++.|+++++ .+.++.+|....+.- ..++|
T Consensus 189 pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~f 268 (364)
T 2qfm_A 189 GKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREF 268 (364)
T ss_dssp TCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCE
T ss_pred CCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCCc
Confidence 7899999999999999998876 689999999999999998764 367888887543321 35789
Q ss_pred cEEEECCch-hhhccccccCCchHH-HHHHHHHHH----HHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 115 DGAISISAV-QWLCNADKASHEPRL-RLKAFFGSL----YRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 115 D~Vis~~~l-~~l~~~~~~~~~p~~-~l~~~l~~l----~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
|+||+...- .. ...|.. --..|++.+ .++|+|||.++++...........+.....+.-|..
T Consensus 269 DvII~D~~d~P~-------~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~~F~~ 336 (364)
T 2qfm_A 269 DYVINDLTAVPI-------STSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCP 336 (364)
T ss_dssp EEEEEECCSSCC-------CCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSC
T ss_pred eEEEECCCCccc-------CcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHhCCc
Confidence 999986432 11 011210 023555555 899999999999876544333333333333455765
No 261
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.97 E-value=2.1e-09 Score=100.83 Aligned_cols=117 Identities=15% Similarity=0.096 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC---------------------------------------
Q 043626 33 QAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG--------------------------------------- 73 (291)
Q Consensus 33 q~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g--------------------------------------- 73 (291)
...++..++.+....+ +..|||++||||.++..++..+
T Consensus 186 ~e~lAa~ll~l~~~~~---~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~ 262 (393)
T 3k0b_A 186 KETMAAALVLLTSWHP---DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQ 262 (393)
T ss_dssp CHHHHHHHHHHSCCCT---TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTC
T ss_pred cHHHHHHHHHHhCCCC---CCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccC
Confidence 4567778888877765 6799999999999988777543
Q ss_pred -CeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCCCCCcccEEEECCchhh-hccccccCCchHHHHHHHHH
Q 043626 74 -HQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGLRPGVVDGAISISAVQW-LCNADKASHEPRLRLKAFFG 145 (291)
Q Consensus 74 -~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~-l~~~~~~~~~p~~~l~~~l~ 145 (291)
..++|+|+|+.|++.|+++.. .+.++++|+.+ ++. +.+||+||++..+.. +. ....+..+..
T Consensus 263 ~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~-~~~-~~~fD~Iv~NPPYg~rl~--------~~~~l~~ly~ 332 (393)
T 3k0b_A 263 PLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVAD-FQT-EDEYGVVVANPPYGERLE--------DEEAVRQLYR 332 (393)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGG-CCC-CCCSCEEEECCCCCCSHH--------HHHHHHHHHH
T ss_pred CceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHh-CCC-CCCCCEEEECCCCccccC--------CchhHHHHHH
Confidence 359999999999999998752 37899999854 443 458999999955421 11 1123556666
Q ss_pred HHHHhccC--CcEEEEEEc
Q 043626 146 SLYRCLAR--GARAVFQIY 162 (291)
Q Consensus 146 ~l~~~Lkp--gG~lv~~~~ 162 (291)
.+.+.|++ ||.+++-+.
T Consensus 333 ~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 333 EMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHHHHHHTCTTCEEEEEEC
T ss_pred HHHHHHhcCCCCEEEEEEC
Confidence 66677766 888888764
No 262
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.96 E-value=1.8e-09 Score=100.94 Aligned_cols=118 Identities=19% Similarity=0.168 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC---------------------------------------
Q 043626 33 QAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG--------------------------------------- 73 (291)
Q Consensus 33 q~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g--------------------------------------- 73 (291)
...++..++.+....+ +..|||++||||.++..++..+
T Consensus 180 ~e~lAa~ll~~~~~~~---~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~ 256 (385)
T 3ldu_A 180 RETLAAGLIYLTPWKA---GRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNES 256 (385)
T ss_dssp CHHHHHHHHHTSCCCT---TSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSC
T ss_pred cHHHHHHHHHhhCCCC---CCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccC
Confidence 3456777777777665 6799999999999988887553
Q ss_pred -CeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHH
Q 043626 74 -HQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGS 146 (291)
Q Consensus 74 -~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~ 146 (291)
..|+|+|+++.|++.|+.+.. .+.+.++|+.+ ++. +.+||+||++..+..-. .....+..+...
T Consensus 257 ~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~-l~~-~~~~D~Iv~NPPyg~rl-------~~~~~l~~ly~~ 327 (385)
T 3ldu_A 257 KFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQ-FKS-EDEFGFIITNPPYGERL-------EDKDSVKQLYKE 327 (385)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGG-CCC-SCBSCEEEECCCCCCSH-------HHHHHHHHHHHH
T ss_pred CceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhh-cCc-CCCCcEEEECCCCcCcc-------CCHHHHHHHHHH
Confidence 469999999999999998752 37899999854 443 46899999986653110 112336677777
Q ss_pred HHHhccC--CcEEEEEEc
Q 043626 147 LYRCLAR--GARAVFQIY 162 (291)
Q Consensus 147 l~~~Lkp--gG~lv~~~~ 162 (291)
+.+.|++ |+.+++-+.
T Consensus 328 lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 328 LGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp HHHHHHTSBSCEEEEEES
T ss_pred HHHHHhhCCCCEEEEEEC
Confidence 7778877 888887664
No 263
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.94 E-value=6.7e-09 Score=96.43 Aligned_cols=108 Identities=12% Similarity=0.070 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCC
Q 043626 33 QAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGL 107 (291)
Q Consensus 33 q~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~ 107 (291)
...+...+++.+... +..|||+|||+|.++..|+..+..|+|+|+|+.|++.|+++. .++.++.+|+.+.+
T Consensus 199 ~~~l~~~~~~~~~~~----~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~ 274 (369)
T 3bt7_A 199 NIQMLEWALDVTKGS----KGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFT 274 (369)
T ss_dssp HHHHHHHHHHHTTTC----CSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHH
T ss_pred HHHHHHHHHHHhhcC----CCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHH
Confidence 356777888887654 358999999999999999998889999999999999998764 34788988874432
Q ss_pred C-CCC--------------CcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 108 G-LRP--------------GVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 108 ~-~~~--------------~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
+ +.. .+||+|++...-. .+...+.+.|+++|++++..
T Consensus 275 ~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~-----------------g~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 275 QAMNGVREFNRLQGIDLKSYQCETIFVDPPRS-----------------GLDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp HHHSSCCCCTTGGGSCGGGCCEEEEEECCCTT-----------------CCCHHHHHHHTTSSEEEEEE
T ss_pred HHHhhccccccccccccccCCCCEEEECcCcc-----------------ccHHHHHHHHhCCCEEEEEE
Confidence 1 111 3799999752211 12334566667888877654
No 264
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.94 E-value=4.4e-09 Score=98.31 Aligned_cols=118 Identities=14% Similarity=0.073 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC---------------------------------------
Q 043626 33 QAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG--------------------------------------- 73 (291)
Q Consensus 33 q~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g--------------------------------------- 73 (291)
...++..++.+....+ +..|||.+||||.+...++..+
T Consensus 179 ~e~LAaall~l~~~~~---~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~ 255 (384)
T 3ldg_A 179 KENMAAAIILLSNWFP---DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDI 255 (384)
T ss_dssp CHHHHHHHHHHTTCCT---TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTC
T ss_pred cHHHHHHHHHHhCCCC---CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccC
Confidence 4467777788777765 6799999999999988777543
Q ss_pred -CeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHH
Q 043626 74 -HQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGS 146 (291)
Q Consensus 74 -~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~ 146 (291)
..++|+|+|+.|++.|+++.. .+.++++|+.+ ++. +.+||+||++..+..-. .....+..+...
T Consensus 256 ~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~-l~~-~~~fD~Iv~NPPYG~rl-------~~~~~l~~ly~~ 326 (384)
T 3ldg_A 256 QLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQD-FKT-NKINGVLISNPPYGERL-------LDDKAVDILYNE 326 (384)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGG-CCC-CCCSCEEEECCCCTTTT-------SCHHHHHHHHHH
T ss_pred CceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHH-CCc-cCCcCEEEECCchhhcc-------CCHHHHHHHHHH
Confidence 359999999999999998752 26899999854 443 35899999996553211 112236677777
Q ss_pred HHHhccC--CcEEEEEEc
Q 043626 147 LYRCLAR--GARAVFQIY 162 (291)
Q Consensus 147 l~~~Lkp--gG~lv~~~~ 162 (291)
+.+.|++ ||.+++-+.
T Consensus 327 lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 327 MGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHHTTCTTSEEEEEES
T ss_pred HHHHHhhCCCcEEEEEEC
Confidence 7778876 898888774
No 265
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.94 E-value=7.5e-09 Score=91.11 Aligned_cols=83 Identities=10% Similarity=0.170 Sum_probs=65.3
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhc-CCcceEEEccCCCCCCCCC-
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALER-EVEGDLLLGDMGQGLGLRP- 111 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~-~~~~~~~~~D~~~~~~~~~- 111 (291)
.+.+++++.+...+ +..|||||||+|.++..|++.+ .+++|+|+++.|++.++++ ..++.++++|+. .++++.
T Consensus 18 ~i~~~iv~~~~~~~---~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~-~~~~~~~ 93 (249)
T 3ftd_A 18 GVLKKIAEELNIEE---GNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSIGDERLEVINEDAS-KFPFCSL 93 (249)
T ss_dssp HHHHHHHHHTTCCT---TCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTT-TCCGGGS
T ss_pred HHHHHHHHhcCCCC---cCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhccCCCeEEEEcchh-hCChhHc
Confidence 56778888888765 6799999999999999999996 8999999999999999987 124689999984 355432
Q ss_pred -CcccEEEECCc
Q 043626 112 -GVVDGAISISA 122 (291)
Q Consensus 112 -~~fD~Vis~~~ 122 (291)
+.| .|+++..
T Consensus 94 ~~~~-~vv~NlP 104 (249)
T 3ftd_A 94 GKEL-KVVGNLP 104 (249)
T ss_dssp CSSE-EEEEECC
T ss_pred cCCc-EEEEECc
Confidence 233 5666533
No 266
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.93 E-value=4.9e-09 Score=93.87 Aligned_cols=83 Identities=11% Similarity=0.061 Sum_probs=65.9
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCe----EEEEeCCHHHHHHHHhc-CCcceEEEccCCCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQ----WIGLDISQSMLNIALER-EVEGDLLLGDMGQGLGL 109 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~----v~gvDis~~ml~~a~~~-~~~~~~~~~D~~~~~~~ 109 (291)
.+.+++++.+.+.+ +..|||||||+|.++..|++.+.. |+|+|+|+.|++.++++ ..++.++++|+. .+++
T Consensus 29 ~i~~~iv~~~~~~~---~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~-~~~~ 104 (279)
T 3uzu_A 29 GVIDAIVAAIRPER---GERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDAL-TFDF 104 (279)
T ss_dssp HHHHHHHHHHCCCT---TCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGG-GCCG
T ss_pred HHHHHHHHhcCCCC---cCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChh-cCCh
Confidence 56778888888776 679999999999999999998777 99999999999999987 345789999984 3554
Q ss_pred CCC------cccEEEECC
Q 043626 110 RPG------VVDGAISIS 121 (291)
Q Consensus 110 ~~~------~fD~Vis~~ 121 (291)
..- ..+.||+|.
T Consensus 105 ~~~~~~~~~~~~~vv~Nl 122 (279)
T 3uzu_A 105 GSIARPGDEPSLRIIGNL 122 (279)
T ss_dssp GGGSCSSSSCCEEEEEEC
T ss_pred hHhcccccCCceEEEEcc
Confidence 321 234677763
No 267
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.87 E-value=5.7e-09 Score=94.76 Aligned_cols=130 Identities=12% Similarity=-0.043 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--C-CeEEEEeCCHHHHHHHHhcC-----CcceEEEccCC
Q 043626 33 QAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--G-HQWIGLDISQSMLNIALERE-----VEGDLLLGDMG 104 (291)
Q Consensus 33 q~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g-~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~ 104 (291)
|...+..++.+|...+ +.+|||+|||+|..+..|++. + ..|+++|+++.+++.++++. .++.++.+|+.
T Consensus 87 Qd~~s~l~~~~l~~~~---g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~ 163 (309)
T 2b9e_A 87 QDRASCLPAMLLDPPP---GSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFL 163 (309)
T ss_dssp CCTGGGHHHHHHCCCT---TCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGG
T ss_pred ECHHHHHHHHHhCCCC---CCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChH
Confidence 3334445566677665 779999999999999999975 2 79999999999999998764 24788899974
Q ss_pred CCCCCC--CCcccEEEECCc---hhhh-ccccccC------Cch---HHHHHHHHHHHHHhccCCcEEEEEEcCCCh
Q 043626 105 QGLGLR--PGVVDGAISISA---VQWL-CNADKAS------HEP---RLRLKAFFGSLYRCLARGARAVFQIYPESV 166 (291)
Q Consensus 105 ~~~~~~--~~~fD~Vis~~~---l~~l-~~~~~~~------~~p---~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~ 166 (291)
...+.. .++||.|++... ...+ .+++... ... ......++..+.++|+ ||+++..+..-++
T Consensus 164 ~~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~ 239 (309)
T 2b9e_A 164 AVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQ 239 (309)
T ss_dssp GSCTTCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCG
T ss_pred hcCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCCh
Confidence 422211 157999997421 1111 0111100 000 1112456777777786 9999987765433
No 268
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.85 E-value=5.3e-09 Score=101.89 Aligned_cols=153 Identities=15% Similarity=0.140 Sum_probs=97.7
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--------------------CCeEEEEeCCHHHHHHHHhcC-
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--------------------GHQWIGLDISQSMLNIALERE- 93 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--------------------g~~v~gvDis~~ml~~a~~~~- 93 (291)
.+++.+++++.... +.+|||.|||||.+...+++. ...++|+|+++.++..|+.+.
T Consensus 156 ~iv~~mv~~l~p~~---~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~ 232 (541)
T 2ar0_A 156 PLIKTIIHLLKPQP---REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCL 232 (541)
T ss_dssp HHHHHHHHHHCCCT---TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCC---CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHH
Confidence 34555667776544 679999999999988777653 137999999999999998753
Q ss_pred ----Cc-----ceEEEccCCCCCCCCCCcccEEEECCchhhhcccc-ccCC-ch-HHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 94 ----VE-----GDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNAD-KASH-EP-RLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 94 ----~~-----~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~-~~~~-~p-~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
.. ..+.++|.....+...+.||+||++..+......+ .... .| ...-..|+..+.+.|+|||++++.+
T Consensus 233 l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 233 LHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp TTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 12 57888886432223457899999997665332211 0000 00 1112478999999999999999876
Q ss_pred cCC---ChHHHHHHHHHHHHcCCCCcEEEeCCC
Q 043626 162 YPE---SVAQRELILGAAMRAGFAGGVVVDYPH 191 (291)
Q Consensus 162 ~~~---~~~~~~~i~~~~~~aGF~~~~~~~~p~ 191 (291)
... .......|...+.+.+.- ..++.+|.
T Consensus 313 p~~~L~~~~~~~~iR~~L~~~~~l-~~ii~Lp~ 344 (541)
T 2ar0_A 313 PDNVLFEGGKGTDIRRDLMDKCHL-HTILRLPT 344 (541)
T ss_dssp EHHHHHCCTHHHHHHHHHHHHEEE-EEEEECCS
T ss_pred cCcceecCcHHHHHHHHHhhcCCE-EEEEEcCc
Confidence 321 111234566666655432 24555554
No 269
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.83 E-value=4.5e-09 Score=98.02 Aligned_cols=94 Identities=14% Similarity=0.066 Sum_probs=72.5
Q ss_pred CCeEEEEcCCCchhHHHHHHc-C-CeEEEEeCCHHHHHHHHhcC-------------------C-cceEEEccCCCCCCC
Q 043626 52 PRLLLDIGCGSGLSGETLSEN-G-HQWIGLDISQSMLNIALERE-------------------V-EGDLLLGDMGQGLGL 109 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~-g-~~v~gvDis~~ml~~a~~~~-------------------~-~~~~~~~D~~~~~~~ 109 (291)
+.+|||+|||+|..+..++.. + ..|+++|+++.+++.++++. . ++.++++|+...+..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 569999999999999999987 4 68999999999999998753 1 267888887443221
Q ss_pred CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 110 RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 110 ~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
..+.||+|++.. + .. ...++..+.++|++||.++++
T Consensus 128 ~~~~fD~I~lDP-~---~~-----------~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 128 RHRYFHFIDLDP-F---GS-----------PMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp STTCEEEEEECC-S---SC-----------CHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCCCEEEeCC-C---CC-----------HHHHHHHHHHhcCCCCEEEEE
Confidence 245799999652 1 11 247888999999999988875
No 270
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.83 E-value=1.4e-08 Score=90.01 Aligned_cols=134 Identities=11% Similarity=0.051 Sum_probs=84.7
Q ss_pred CCeEEEEcCCCchhHHHHHHc-C-CeEEEEeCCHHHHHHHHhc---CCcceEEEccCCCCCCCCCCcccEEEECCchhhh
Q 043626 52 PRLLLDIGCGSGLSGETLSEN-G-HQWIGLDISQSMLNIALER---EVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWL 126 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~-g-~~v~gvDis~~ml~~a~~~---~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l 126 (291)
...|||||||+|.+++.+++. + ..++|+|++..+...+... ..++..+..++ +...+..+.+|+|+|..+.. -
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~-dv~~l~~~~~DvVLSDmApn-s 168 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKT-DVFNMEVIPGDTLLCDIGES-S 168 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSC-CGGGSCCCCCSEEEECCCCC-C
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCc-chhhcCCCCcCEEEecCccC-C
Confidence 669999999999999998865 4 5789999987643322210 01233333333 22345578999999998775 2
Q ss_pred ccccccCCchHHHHHHHHHHHHHhccCC--cEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeCCCCCC
Q 043626 127 CNADKASHEPRLRLKAFFGSLYRCLARG--ARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSK 194 (291)
Q Consensus 127 ~~~~~~~~~p~~~l~~~l~~l~~~Lkpg--G~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~p~~~~ 194 (291)
.+.. ....+...+|.-+..+|+|| |.|++.++..-......+...+.+. |.. +.+.-| +.+
T Consensus 169 G~~~----~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~l~~~lk~~-F~~-V~~~KP-aSR 231 (282)
T 3gcz_A 169 PSIA----VEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIMEELSRLQLK-HGG-GLVRVP-LSR 231 (282)
T ss_dssp SCHH----HHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHHHHHHHHHHH-HCC-EEECCT-TSC
T ss_pred CChH----HHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHHHHHHHHHHh-cCC-EEEEcC-CCc
Confidence 1110 01111223577788999999 9999988763223444555555554 776 666777 544
No 271
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.79 E-value=1.8e-09 Score=95.65 Aligned_cols=74 Identities=16% Similarity=0.083 Sum_probs=60.1
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCH-------HHHHHHHhcCC------cceEEEccCCCCCC-CCC--Cccc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQ-------SMLNIALEREV------EGDLLLGDMGQGLG-LRP--GVVD 115 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~-------~ml~~a~~~~~------~~~~~~~D~~~~~~-~~~--~~fD 115 (291)
+.+|||+|||+|..+..|+..|..|+|+|+|+ .+++.|+++.. .+.++++|+.+.++ +.. ++||
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~fD 163 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKPD 163 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCCS
T ss_pred cCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCcc
Confidence 56999999999999999999999999999999 99999987642 27899999854333 333 7899
Q ss_pred EEEECCchhh
Q 043626 116 GAISISAVQW 125 (291)
Q Consensus 116 ~Vis~~~l~~ 125 (291)
+|+++..+++
T Consensus 164 ~V~~dP~~~~ 173 (258)
T 2r6z_A 164 IVYLDPMYPE 173 (258)
T ss_dssp EEEECCCC--
T ss_pred EEEECCCCCC
Confidence 9999877765
No 272
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.79 E-value=7.1e-09 Score=91.46 Aligned_cols=82 Identities=7% Similarity=0.046 Sum_probs=63.9
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCe--EEEEeCCHHHHHHHHhcCC---cceEEEccCCCCCCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQ--WIGLDISQSMLNIALEREV---EGDLLLGDMGQGLGL 109 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~--v~gvDis~~ml~~a~~~~~---~~~~~~~D~~~~~~~ 109 (291)
.+.+++++.+.+.+ +..|||||||+|.++. +. .+.. |+|+|+++.|++.++++.. ++.++++|+.. +++
T Consensus 8 ~i~~~iv~~~~~~~---~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~-~~~ 81 (252)
T 1qyr_A 8 FVIDSIVSAINPQK---GQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMT-FNF 81 (252)
T ss_dssp HHHHHHHHHHCCCT---TCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGG-CCH
T ss_pred HHHHHHHHhcCCCC---cCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhh-CCH
Confidence 46777888887765 6799999999999999 65 4666 9999999999999998764 57899999843 444
Q ss_pred CC-----CcccEEEECCc
Q 043626 110 RP-----GVVDGAISISA 122 (291)
Q Consensus 110 ~~-----~~fD~Vis~~~ 122 (291)
.. +..|.||+|..
T Consensus 82 ~~~~~~~~~~~~vvsNlP 99 (252)
T 1qyr_A 82 GELAEKMGQPLRVFGNLP 99 (252)
T ss_dssp HHHHHHHTSCEEEEEECC
T ss_pred HHhhcccCCceEEEECCC
Confidence 22 23468888744
No 273
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.78 E-value=5.2e-09 Score=94.67 Aligned_cols=81 Identities=26% Similarity=0.382 Sum_probs=65.5
Q ss_pred HHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCC----cceEEEccCCCCCC-
Q 043626 36 LSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALEREV----EGDLLLGDMGQGLG- 108 (291)
Q Consensus 36 ~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~----~~~~~~~D~~~~~~- 108 (291)
+.+.+++.|.+.+ +..|||+|||+|..+..+++. +..|+|+|+|+.|++.|+++.. .+.++++|+.. ++
T Consensus 14 Ll~e~l~~L~~~~---g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~-l~~ 89 (301)
T 1m6y_A 14 MVREVIEFLKPED---EKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYRE-ADF 89 (301)
T ss_dssp THHHHHHHHCCCT---TCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGG-HHH
T ss_pred HHHHHHHhcCCCC---CCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHH-HHH
Confidence 5667788888765 679999999999999999987 4899999999999999998763 47899999743 32
Q ss_pred -C---CCCcccEEEEC
Q 043626 109 -L---RPGVVDGAISI 120 (291)
Q Consensus 109 -~---~~~~fD~Vis~ 120 (291)
+ ..++||+|++.
T Consensus 90 ~l~~~g~~~~D~Vl~D 105 (301)
T 1m6y_A 90 LLKTLGIEKVDGILMD 105 (301)
T ss_dssp HHHHTTCSCEEEEEEE
T ss_pred HHHhcCCCCCCEEEEc
Confidence 1 11589999974
No 274
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.74 E-value=4.5e-07 Score=81.40 Aligned_cols=124 Identities=16% Similarity=0.083 Sum_probs=92.1
Q ss_pred CCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcCC----------cceEEEccCCCCCCCCCCcccEEEE
Q 043626 52 PRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALEREV----------EGDLLLGDMGQGLGLRPGVVDGAIS 119 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~~----------~~~~~~~D~~~~~~~~~~~fD~Vis 119 (291)
+.+||-||-|.|.....+++.. ..++.|||++.+++.|++.++ .+.++.+|....+....++||+||+
T Consensus 84 pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~ 163 (294)
T 3o4f_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIIS 163 (294)
T ss_dssp CCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEE
T ss_pred CCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEE
Confidence 6799999999999999998873 799999999999999987652 3688999987777666789999997
Q ss_pred CCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcC--CChHHHHHHHHHHHHcCCCC
Q 043626 120 ISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYP--ESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 120 ~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~--~~~~~~~~i~~~~~~aGF~~ 183 (291)
-..-..-+. .... -..|++.++++|+|||+++.+... .+......+...+.+. |..
T Consensus 164 D~~dp~~~~--~~L~-----t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~-F~~ 221 (294)
T 3o4f_A 164 DCTDPIGPG--ESLF-----TSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHY-FSD 221 (294)
T ss_dssp SCCCCCCTT--CCSS-----CCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHH-CSE
T ss_pred eCCCcCCCc--hhhc-----CHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhh-CCc
Confidence 643211100 0000 247999999999999999997532 2344555566666665 653
No 275
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.72 E-value=2e-08 Score=94.03 Aligned_cols=95 Identities=17% Similarity=-0.002 Sum_probs=73.9
Q ss_pred CCeEEEEcCCCchhHHHHHHc--C-CeEEEEeCCHHHHHHHHhcCC-----c--ceEEEccCCCCCC-CCCCcccEEEEC
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--G-HQWIGLDISQSMLNIALEREV-----E--GDLLLGDMGQGLG-LRPGVVDGAISI 120 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g-~~v~gvDis~~ml~~a~~~~~-----~--~~~~~~D~~~~~~-~~~~~fD~Vis~ 120 (291)
+.+|||++||+|.++..++.. | ..|+++|+++.+++.++++.. + +.++.+|+...+. ...+.||+|++.
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lD 132 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLD 132 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEEC
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEEC
Confidence 569999999999999999884 5 689999999999999988652 3 6788888744332 224689999986
Q ss_pred CchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 121 SAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 121 ~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
. . .. ...++..+.++|++||.++++.
T Consensus 133 P-~---g~-----------~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 133 P-F---GT-----------PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp C-S---SC-----------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred C-C---cC-----------HHHHHHHHHHHhCCCCEEEEEe
Confidence 4 1 11 2368889999999999888853
No 276
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.72 E-value=2e-07 Score=83.23 Aligned_cols=134 Identities=13% Similarity=0.059 Sum_probs=83.4
Q ss_pred CCeEEEEcCCCchhHHHHHHc-C-CeEEEEeCCHHHHHHHHh--c-CCcceEEEccCCCCCCCCCCcccEEEECCchhhh
Q 043626 52 PRLLLDIGCGSGLSGETLSEN-G-HQWIGLDISQSMLNIALE--R-EVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWL 126 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~-g-~~v~gvDis~~ml~~a~~--~-~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l 126 (291)
+..||||||++|.++..+++. + ..|+|+|+...+...... . ..++..+..++ +...+.++.+|+|+|..+.. -
T Consensus 82 g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~-di~~l~~~~~DlVlsD~APn-s 159 (300)
T 3eld_A 82 TGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKS-NVFTMPTEPSDTLLCDIGES-S 159 (300)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSC-CTTTSCCCCCSEEEECCCCC-C
T ss_pred CCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCc-eeeecCCCCcCEEeecCcCC-C
Confidence 779999999999999999986 4 578999997643211100 0 01222233332 22345578999999987765 2
Q ss_pred ccccccCCchHHHHHHHHHHHHHhccCC-cEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeCCCCCC
Q 043626 127 CNADKASHEPRLRLKAFFGSLYRCLARG-ARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSK 194 (291)
Q Consensus 127 ~~~~~~~~~p~~~l~~~l~~l~~~Lkpg-G~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~p~~~~ 194 (291)
.+.. ....+...+|.-+..+|+|| |.|++.++..-......+...+.+. |.. +.+.-| +.+
T Consensus 160 G~~~----~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk~~-F~~-V~~~KP-aSR 221 (300)
T 3eld_A 160 SNPL----VERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLR-FGG-GIVRVP-FSR 221 (300)
T ss_dssp SSHH----HHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHHHH-HCC-EEECCT-TSC
T ss_pred CCHH----HHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHHHh-CCc-EEEEeC-CCC
Confidence 1100 01111234477888999999 9999988762233444555555544 776 666777 544
No 277
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.72 E-value=3.9e-08 Score=95.78 Aligned_cols=152 Identities=13% Similarity=0.004 Sum_probs=97.0
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc-----------------CCeEEEEeCCHHHHHHHHhcCC---
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN-----------------GHQWIGLDISQSMLNIALEREV--- 94 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~-----------------g~~v~gvDis~~ml~~a~~~~~--- 94 (291)
.+++.+++++... ..+|||.+||||.+...+++. ...++|+|+++.++.+|+.+..
T Consensus 232 ~Vv~lmv~ll~p~----~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g 307 (544)
T 3khk_A 232 SIVTLIVEMLEPY----KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG 307 (544)
T ss_dssp HHHHHHHHHHCCC----SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcC----CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC
Confidence 4566677777544 349999999999987766432 3579999999999999987641
Q ss_pred -c--ceEEEccCCCCCCCCCCcccEEEECCchhh---hccc---ccc---C--------CchH-HHHHHHHHHHHHhccC
Q 043626 95 -E--GDLLLGDMGQGLGLRPGVVDGAISISAVQW---LCNA---DKA---S--------HEPR-LRLKAFFGSLYRCLAR 153 (291)
Q Consensus 95 -~--~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~---l~~~---~~~---~--------~~p~-~~l~~~l~~l~~~Lkp 153 (291)
. +.+.++|......+....||+||+|..+.. -.+. +.. . ..|. ..-..|+..+.+.|+|
T Consensus 308 i~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~ 387 (544)
T 3khk_A 308 IDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAP 387 (544)
T ss_dssp CCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEE
T ss_pred CCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhcc
Confidence 1 222666654333345678999999966542 1100 000 0 0010 1123699999999999
Q ss_pred CcEEEEEEcCC---Ch-HHHHHHHHHHHHcCCCCcEEEeCCC
Q 043626 154 GARAVFQIYPE---SV-AQRELILGAAMRAGFAGGVVVDYPH 191 (291)
Q Consensus 154 gG~lv~~~~~~---~~-~~~~~i~~~~~~aGF~~~~~~~~p~ 191 (291)
||++++.+... .. .....+.+.+.+.+.-. .++..|.
T Consensus 388 gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~~l~-aII~LP~ 428 (544)
T 3khk_A 388 TGSMALLLANGSMSSNTNNEGEIRKTLVEQDLVE-CMVALPG 428 (544)
T ss_dssp EEEEEEEEETHHHHCCGGGHHHHHHHHHHTTCEE-EEEECCT
T ss_pred CceEEEEecchhhhcCcchHHHHHHHHHhCCcHh-EEEECCC
Confidence 99998876321 11 23456777777776544 5666664
No 278
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.71 E-value=1.7e-07 Score=91.25 Aligned_cols=154 Identities=18% Similarity=0.144 Sum_probs=98.8
Q ss_pred HHHHHHHHhCC---CCCCCCCeEEEEcCCCchhHHHHHHc-----CCeEEEEeCCHHHHHHHHhcC-------CcceEEE
Q 043626 36 LSERALELLAL---PDDGVPRLLLDIGCGSGLSGETLSEN-----GHQWIGLDISQSMLNIALERE-------VEGDLLL 100 (291)
Q Consensus 36 ~~~~~lelL~~---~~~~~~~~VLDiGcGsG~~~~~L~~~-----g~~v~gvDis~~ml~~a~~~~-------~~~~~~~ 100 (291)
+++.+++++.. +. .+.+|||.+||||.+...+++. ...++|+|+++.++..|+.+. ....+.+
T Consensus 205 Vv~lmv~ll~~~~~~~--~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~ 282 (542)
T 3lkd_A 205 VAKLMTQIAFLGREDK--QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHN 282 (542)
T ss_dssp HHHHHHHHHHTTCTTC--TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred HHHHHHHHHhcccCCC--CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEe
Confidence 44455555542 22 2679999999999988777665 378999999999999998753 1346888
Q ss_pred ccCCCC-CC-CCCCcccEEEECCchh--hhccc----ccc----C-CchH-HHHHHHHHHHHHhcc-CCcEEEEEEcCC-
Q 043626 101 GDMGQG-LG-LRPGVVDGAISISAVQ--WLCNA----DKA----S-HEPR-LRLKAFFGSLYRCLA-RGARAVFQIYPE- 164 (291)
Q Consensus 101 ~D~~~~-~~-~~~~~fD~Vis~~~l~--~l~~~----~~~----~-~~p~-~~l~~~l~~l~~~Lk-pgG~lv~~~~~~- 164 (291)
+|.... .| +....||+||+|..+. |-.+. +.. . ..|. ..-..|+..+.+.|+ +||++++.+...
T Consensus 283 gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~ 362 (542)
T 3lkd_A 283 ADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGV 362 (542)
T ss_dssp SCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHH
T ss_pred cceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchH
Confidence 886443 12 4467899999996653 21000 000 0 0000 011368999999999 999998876322
Q ss_pred --ChHHHHHHHHHHHHcCCCCcEEEeCCCC
Q 043626 165 --SVAQRELILGAAMRAGFAGGVVVDYPHS 192 (291)
Q Consensus 165 --~~~~~~~i~~~~~~aGF~~~~~~~~p~~ 192 (291)
.......+...+.+.+.-. .++..|..
T Consensus 363 Lf~~~~~~~iRk~Lle~~~l~-~II~LP~~ 391 (542)
T 3lkd_A 363 LFRGNAEGTIRKALLEEGAID-TVIGLPAN 391 (542)
T ss_dssp HHCCTHHHHHHHHHHHTTCEE-EEEECCSS
T ss_pred hhCCchhHHHHHHHHhCCcee-EEEEcccc
Confidence 1112456777777776544 56666643
No 279
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.65 E-value=1.8e-08 Score=89.12 Aligned_cols=85 Identities=11% Similarity=-0.027 Sum_probs=64.4
Q ss_pred HHHHHHhCCCCCCCC--CeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhc-------------C-CcceEEEc
Q 043626 38 ERALELLALPDDGVP--RLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALER-------------E-VEGDLLLG 101 (291)
Q Consensus 38 ~~~lelL~~~~~~~~--~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~-------------~-~~~~~~~~ 101 (291)
+.+++.+.+.+ + .+|||+|||+|..+..++..|..|++||+++.+...++++ . ..+.++++
T Consensus 76 e~l~~al~l~~---g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~ 152 (258)
T 2oyr_A 76 EAVAKAVGIKG---DYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHA 152 (258)
T ss_dssp SHHHHHTTCBT---TBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEES
T ss_pred HHHHHHhcccC---CCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEEC
Confidence 45666776654 4 7999999999999999999998999999999764444332 1 24789999
Q ss_pred cCCCCCCCCCCcccEEEECCchhh
Q 043626 102 DMGQGLGLRPGVVDGAISISAVQW 125 (291)
Q Consensus 102 D~~~~~~~~~~~fD~Vis~~~l~~ 125 (291)
|+.+.++....+||+|++...+.+
T Consensus 153 D~~~~L~~~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 153 SSLTALTDITPRPQVVYLDPMFPH 176 (258)
T ss_dssp CHHHHSTTCSSCCSEEEECCCCCC
T ss_pred CHHHHHHhCcccCCEEEEcCCCCC
Confidence 975544433347999999877654
No 280
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.64 E-value=1e-07 Score=95.56 Aligned_cols=119 Identities=17% Similarity=0.122 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC---------------------------------------
Q 043626 33 QAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG--------------------------------------- 73 (291)
Q Consensus 33 q~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g--------------------------------------- 73 (291)
...++..++.+....+ +..|||.+||||.+...++..+
T Consensus 175 ~e~LAa~ll~~~~~~~---~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~ 251 (703)
T 3v97_A 175 KETLAAAIVMRSGWQP---GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKG 251 (703)
T ss_dssp CHHHHHHHHHHTTCCT---TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhCCCC---CCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhc
Confidence 4467777888877665 6799999999999987766431
Q ss_pred -----CeEEEEeCCHHHHHHHHhcCC------cceEEEccCCCCC-CCCCCcccEEEECCchhh-hccccccCCchHHHH
Q 043626 74 -----HQWIGLDISQSMLNIALEREV------EGDLLLGDMGQGL-GLRPGVVDGAISISAVQW-LCNADKASHEPRLRL 140 (291)
Q Consensus 74 -----~~v~gvDis~~ml~~a~~~~~------~~~~~~~D~~~~~-~~~~~~fD~Vis~~~l~~-l~~~~~~~~~p~~~l 140 (291)
..++|+|+++.|++.|+.+.. .+.+.++|+.+.. ++..++||+||+|..+.. +.+ ...-..+
T Consensus 252 ~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~-----~~~l~~l 326 (703)
T 3v97_A 252 LAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDS-----EPALIAL 326 (703)
T ss_dssp HHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---C-----CHHHHHH
T ss_pred cccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccc-----hhHHHHH
Confidence 479999999999999998753 2688999985422 333448999999965431 110 0111223
Q ss_pred HHHHHHHHHhccCCcEEEE
Q 043626 141 KAFFGSLYRCLARGARAVF 159 (291)
Q Consensus 141 ~~~l~~l~~~LkpgG~lv~ 159 (291)
...+..+.+.+.|||.+++
T Consensus 327 y~~l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 327 HSLLGRIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHhhCCCCeEEE
Confidence 4444555555668999888
No 281
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.63 E-value=1.2e-08 Score=95.76 Aligned_cols=111 Identities=18% Similarity=0.044 Sum_probs=73.8
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC-------cceEEEccCCCCCCC-CCCcccEEEECCch
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV-------EGDLLLGDMGQGLGL-RPGVVDGAISISAV 123 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~-------~~~~~~~D~~~~~~~-~~~~fD~Vis~~~l 123 (291)
+.+|||+|||+|..+..|+..+.+|+|||+|+.|++.|+++.. ++.++++|+.+.++. ..++||+|++....
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDPPr 173 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDPAR 173 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECCEE
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEECCCC
Confidence 5699999999999999999999999999999999999988742 478999998554332 23589999987443
Q ss_pred hhhccccccCCchHHHHHHHHHHHHH-hccCCcEEEEEEcCCC
Q 043626 124 QWLCNADKASHEPRLRLKAFFGSLYR-CLARGARAVFQIYPES 165 (291)
Q Consensus 124 ~~l~~~~~~~~~p~~~l~~~l~~l~~-~LkpgG~lv~~~~~~~ 165 (291)
..- .....+.+.. +.--+..+.. ++..+..+++...|.-
T Consensus 174 r~~--~~grv~~led-~~P~l~~~~~~l~~~~~~~~vK~sP~l 213 (410)
T 3ll7_A 174 RSG--ADKRVYAIAD-CEPDLIPLATELLPFCSSILAKLSPMI 213 (410)
T ss_dssp C-------CCCCGGG-EESCHHHHHHHHGGGSSEEEEEECTTS
T ss_pred cCC--CCceEEehhh-cCCCHHHHHHHHHhhCCcEEEEcCCCC
Confidence 220 0001111110 0111233444 3445567778886654
No 282
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.57 E-value=2.1e-07 Score=93.32 Aligned_cols=139 Identities=12% Similarity=-0.053 Sum_probs=85.8
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-----CeEEEEeCCHHHHHHH--HhcCCc---------ceEEEccCCCCCCCCCCccc
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-----HQWIGLDISQSMLNIA--LEREVE---------GDLLLGDMGQGLGLRPGVVD 115 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-----~~v~gvDis~~ml~~a--~~~~~~---------~~~~~~D~~~~~~~~~~~fD 115 (291)
+.+|||.|||+|.+...++... ..++|+|+++.++..| +.+... ..+...|+....+...+.||
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFD 401 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVS 401 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTEE
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCCC
Confidence 6799999999999999988763 4799999999999999 433211 13344444221123357899
Q ss_pred EEEECCchhh-hccc-cc----------------cCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCCh----HHHHHHH
Q 043626 116 GAISISAVQW-LCNA-DK----------------ASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESV----AQRELIL 173 (291)
Q Consensus 116 ~Vis~~~l~~-l~~~-~~----------------~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~----~~~~~i~ 173 (291)
+||+|..+.- .... .. ...........|+..+.+.|++||++++.+...-. .....+.
T Consensus 402 VVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kkLR 481 (878)
T 3s1s_A 402 VVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKAFR 481 (878)
T ss_dssp EEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHHHH
T ss_pred EEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHHHH
Confidence 9999966521 0000 00 00000011456889999999999999997633211 1234566
Q ss_pred HHHHHcCCCCcEEEeCCC
Q 043626 174 GAAMRAGFAGGVVVDYPH 191 (291)
Q Consensus 174 ~~~~~aGF~~~~~~~~p~ 191 (291)
+.+.+.+. ...++++|.
T Consensus 482 k~LLe~~~-I~aIIdLP~ 498 (878)
T 3s1s_A 482 EFLVGNFG-LEHIFLYPR 498 (878)
T ss_dssp HHHTTTTC-EEEEEECCB
T ss_pred HHHHhCCC-eEEEEECCC
Confidence 66554432 235667765
No 283
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.54 E-value=1.3e-07 Score=83.59 Aligned_cols=117 Identities=21% Similarity=0.248 Sum_probs=77.1
Q ss_pred CCeEEEEcCCCchhHHHHHHc-------C-------CeEEEEeCCH---HHHHHH-----------Hhc-----------
Q 043626 52 PRLLLDIGCGSGLSGETLSEN-------G-------HQWIGLDISQ---SMLNIA-----------LER----------- 92 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~-------g-------~~v~gvDis~---~ml~~a-----------~~~----------- 92 (291)
+.+|||||||+|..+..+++. + .+++++|..+ .++..+ ++.
T Consensus 61 ~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~ 140 (257)
T 2qy6_A 61 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 140 (257)
T ss_dssp EEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEE
T ss_pred CCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccch
Confidence 569999999999988776542 1 4899999766 555533 221
Q ss_pred ----C----CcceEEEccCCCCCCCCCC----cccEEEECC-chhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEE
Q 043626 93 ----E----VEGDLLLGDMGQGLGLRPG----VVDGAISIS-AVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVF 159 (291)
Q Consensus 93 ----~----~~~~~~~~D~~~~~~~~~~----~fD~Vis~~-~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~ 159 (291)
. ..++++.+|+.+.++..++ .||+|+... +.. .+|..=...+|..++++|+|||+++.
T Consensus 141 ~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~---------~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 141 HRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPA---------KNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTT---------TCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcc---------cChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 1 1256788887554553333 799999642 111 12321125799999999999999883
Q ss_pred EEcCCChHHHHHHHHHHHHcCCCC
Q 043626 160 QIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 160 ~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
|.... .+...+..+||..
T Consensus 212 --ysaa~----~vrr~L~~aGF~v 229 (257)
T 2qy6_A 212 --FTSAG----FVRRGLQEAGFTM 229 (257)
T ss_dssp --SCCBH----HHHHHHHHHTEEE
T ss_pred --EeCCH----HHHHHHHHCCCEE
Confidence 43332 4666778899974
No 284
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.53 E-value=1.2e-07 Score=87.60 Aligned_cols=134 Identities=13% Similarity=0.032 Sum_probs=87.3
Q ss_pred HHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcC--CeEEEEeCCHHHHHHHHhcCC-----------cceEEEccC
Q 043626 37 SERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG--HQWIGLDISQSMLNIALEREV-----------EGDLLLGDM 103 (291)
Q Consensus 37 ~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g--~~v~gvDis~~ml~~a~~~~~-----------~~~~~~~D~ 103 (291)
+..+..+|+..+ +.+|||++||+|.-+..|++.+ ..++++|+++.-+...+++.. .+.+...|.
T Consensus 137 S~l~~~~L~~~p---g~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~ 213 (359)
T 4fzv_A 137 SLLPVLALGLQP---GDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDG 213 (359)
T ss_dssp GHHHHHHHCCCT---TEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCG
T ss_pred HHHHHHHhCCCC---CCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCch
Confidence 334555667666 7899999999999999999886 479999999998877766432 345666675
Q ss_pred CCCCCCCCCcccEEEECCch----hhh--ccccccCC-chHH------HHHHHHHHHHHhccCCcEEEEEEcC----CCh
Q 043626 104 GQGLGLRPGVVDGAISISAV----QWL--CNADKASH-EPRL------RLKAFFGSLYRCLARGARAVFQIYP----ESV 166 (291)
Q Consensus 104 ~~~~~~~~~~fD~Vis~~~l----~~l--~~~~~~~~-~p~~------~l~~~l~~l~~~LkpgG~lv~~~~~----~~~ 166 (291)
........+.||.|++...- .++ .+++.... .+.. ....+|..+..+|||||++|-++.. +|.
T Consensus 214 ~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE 293 (359)
T 4fzv_A 214 RKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNE 293 (359)
T ss_dssp GGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTH
T ss_pred hhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCH
Confidence 33222346789999964221 011 11121111 1111 1257888999999999999987654 344
Q ss_pred HHHHHHH
Q 043626 167 AQRELIL 173 (291)
Q Consensus 167 ~~~~~i~ 173 (291)
.+++.+.
T Consensus 294 ~vV~~~L 300 (359)
T 4fzv_A 294 YVVQGAI 300 (359)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 285
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.45 E-value=1.9e-07 Score=92.44 Aligned_cols=135 Identities=10% Similarity=-0.006 Sum_probs=83.3
Q ss_pred cccCCchhhcccccc----chhHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHH----cC----------
Q 043626 12 EIFYDDTEARKYTSS----SRIIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSE----NG---------- 73 (291)
Q Consensus 12 e~fy~~~~a~~Y~~~----~~~~~iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~----~g---------- 73 (291)
+-..+.-++..|... .+...++..+...+.++..... ....|||||||+|.++..... .+
T Consensus 368 QPL~dNLes~tYe~fekD~vRy~~Y~~AI~~al~d~~~~~~--~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~ 445 (745)
T 3ua3_A 368 QPLSENLDSGVYNTFEQDQIKYDVYGEAVVGALKDLGADGR--KTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESL 445 (745)
T ss_dssp CTTTSCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCC--SEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCC
T ss_pred CcchhccchHHHHHHcCChhhHHHHHHHHHHHHHHhhcccC--CCcEEEEECCCCCHHHHHHHHHHHHhCcccccccccc
Confidence 334455666677653 2233445555554445443211 145899999999999743321 12
Q ss_pred -CeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCCCC-----CCcccEEEECCchhhhccccccCCchHHHHHH
Q 043626 74 -HQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLGLR-----PGVVDGAISISAVQWLCNADKASHEPRLRLKA 142 (291)
Q Consensus 74 -~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~~~-----~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~ 142 (291)
.+|++||.|+.++..++.+. ..+.++.+|+.+ +.++ ++..|+|||-..=..+++. ....
T Consensus 446 ~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~ee-v~lp~~~~~~ekVDIIVSElmGsfl~nE---------L~pe 515 (745)
T 3ua3_A 446 KVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRS-LPGIAKDRGFEQPDIIVSELLGSFGDNE---------LSPE 515 (745)
T ss_dssp EEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGG-HHHHHHHTTCCCCSEEEECCCBTTBGGG---------SHHH
T ss_pred ccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhh-cccccccCCCCcccEEEEeccccccchh---------ccHH
Confidence 39999999997665444322 238999999944 4332 5789999986443333221 1345
Q ss_pred HHHHHHHhccCCcEEE
Q 043626 143 FFGSLYRCLARGARAV 158 (291)
Q Consensus 143 ~l~~l~~~LkpgG~lv 158 (291)
.|..+.+.|+|||.++
T Consensus 516 ~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 516 CLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHTTGGGSCTTCEEE
T ss_pred HHHHHHHhCCCCcEEE
Confidence 6777789999999866
No 286
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.44 E-value=9.9e-08 Score=76.64 Aligned_cols=82 Identities=13% Similarity=0.120 Sum_probs=60.1
Q ss_pred CCeEEEEcCCCc-hhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCC--CcccEEEECCchhhhc
Q 043626 52 PRLLLDIGCGSG-LSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRP--GVVDGAISISAVQWLC 127 (291)
Q Consensus 52 ~~~VLDiGcGsG-~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~--~~fD~Vis~~~l~~l~ 127 (291)
+.+|||||||+| ..+..|++ .|..|+++|+++..++ +++.|+.. |... ..||+|.++....
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~----------~v~dDiF~--P~~~~Y~~~DLIYsirPP~--- 100 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG----------IVRDDITS--PRMEIYRGAALIYSIRPPA--- 100 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT----------EECCCSSS--CCHHHHTTEEEEEEESCCT---
T ss_pred CCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc----------eEEccCCC--CcccccCCcCEEEEcCCCH---
Confidence 569999999999 59999997 8899999999997654 88888854 3222 4899998864432
Q ss_pred cccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 128 NADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 128 ~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
.+...+-.+++. -|.-+++..
T Consensus 101 -----------El~~~i~~lA~~--v~adliI~p 121 (153)
T 2k4m_A 101 -----------EIHSSLMRVADA--VGARLIIKP 121 (153)
T ss_dssp -----------TTHHHHHHHHHH--HTCEEEEEC
T ss_pred -----------HHHHHHHHHHHH--cCCCEEEEc
Confidence 245555556554 366677764
No 287
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.43 E-value=6.6e-07 Score=78.25 Aligned_cols=131 Identities=17% Similarity=0.141 Sum_probs=77.2
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHH--HHHHHHhcC-Ccc---eEEEc-cCCCCCCCCCCcccEEEECCc
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQS--MLNIALERE-VEG---DLLLG-DMGQGLGLRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~--ml~~a~~~~-~~~---~~~~~-D~~~~~~~~~~~fD~Vis~~~ 122 (291)
+..|||+||++|.+++.+++. ...|.|.++..+ +... ... ..+ .+..+ |+.+ ..+..+|+|+|-.+
T Consensus 74 g~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~--~~~~~Gv~~i~~~~G~Df~~---~~~~~~DvVLSDMA 148 (269)
T 2px2_A 74 IGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPM--LMQSYGWNIVTMKSGVDVFY---KPSEISDTLLCDIG 148 (269)
T ss_dssp CEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCGGG---SCCCCCSEEEECCC
T ss_pred CCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCC--cccCCCceEEEeeccCCccC---CCCCCCCEEEeCCC
Confidence 789999999999999999987 234445544332 1100 000 122 33335 8743 33568999999876
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHHhccCCc-EEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeCCCCCC
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYRCLARGA-RAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSK 194 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG-~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~p~~~~ 194 (291)
.. - ..... +-...+. +|.-+...|+||| .|++-++.........+...+.+. |.. +.+.-|.|..
T Consensus 149 Pn-S--G~~~v-D~~Rs~~-aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~~l~~lk~~-F~~-vkvk~paSR~ 214 (269)
T 2px2_A 149 ES-S--PSAEI-EEQRTLR-ILEMVSDWLSRGPKEFCIKILCPYMPKVIEKLESLQRR-FGG-GLVRVPLSRN 214 (269)
T ss_dssp CC-C--SCHHH-HHHHHHH-HHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHH-HCC-EEECCTTSCT
T ss_pred CC-C--CccHH-HHHHHHH-HHHHHHHHhhcCCcEEEEEECCCCchHHHHHHHHHHHH-cCC-EEEECCCCCC
Confidence 53 1 11111 1111123 6777779999999 999987764334444444444444 776 4466675543
No 288
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.42 E-value=1.7e-06 Score=73.51 Aligned_cols=92 Identities=13% Similarity=0.090 Sum_probs=68.7
Q ss_pred CCeEEEEcCCCchhHHHHHHc-CCeEEEEeCCHHHHHHHHhcCC--------cceEEEccCCCC--------------CC
Q 043626 52 PRLLLDIGCGSGLSGETLSEN-GHQWIGLDISQSMLNIALEREV--------EGDLLLGDMGQG--------------LG 108 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~--------~~~~~~~D~~~~--------------~~ 108 (291)
+.+|||||| |.++..+++. +.+|+.||.++.+.+.|++++. .++++.+|+.+. ++
T Consensus 31 a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~ 108 (202)
T 3cvo_A 31 AEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYP 108 (202)
T ss_dssp CSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTT
T ss_pred CCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHH
Confidence 569999998 5788888886 6899999999999999987542 367888997543 11
Q ss_pred --------C-CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 109 --------L-RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 109 --------~-~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
. ..++||+|+..... ....+..+...|+|||++++.-
T Consensus 109 ~~~~~i~~~~~~~~fDlIfIDg~k----------------~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 109 DYPLAVWRTEGFRHPDVVLVDGRF----------------RVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp HHHHGGGGCTTCCCCSEEEECSSS----------------HHHHHHHHHHHCSSCEEEEETT
T ss_pred HHhhhhhccccCCCCCEEEEeCCC----------------chhHHHHHHHhcCCCeEEEEeC
Confidence 1 23789999965321 1244555679999999998853
No 289
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.37 E-value=5.4e-07 Score=88.82 Aligned_cols=133 Identities=14% Similarity=0.137 Sum_probs=82.5
Q ss_pred cCCchhhccccccc----hhHHHHHHHHHHHHHHhCCCCC-CCCCeEEEEcCCCchhHHHHHHc----C--CeEEEEeCC
Q 043626 14 FYDDTEARKYTSSS----RIIDIQAKLSERALELLALPDD-GVPRLLLDIGCGSGLSGETLSEN----G--HQWIGLDIS 82 (291)
Q Consensus 14 fy~~~~a~~Y~~~~----~~~~iq~~~~~~~lelL~~~~~-~~~~~VLDiGcGsG~~~~~L~~~----g--~~v~gvDis 82 (291)
..+.-++..|.... +...++..+...+.+.+..... .....|||||||+|.+....+.. + .+|++||-|
T Consensus 315 l~dnL~s~tYevFEkD~vKy~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEkn 394 (637)
T 4gqb_A 315 LMDNLESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKN 394 (637)
T ss_dssp TTSCCCHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESC
T ss_pred hhhhhhhhhhhhhcCChhhHHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 34445555665532 2444555665555555433221 11357999999999985544443 2 268999999
Q ss_pred HHHHHHHHhcC------CcceEEEccCCCCCCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcE
Q 043626 83 QSMLNIALERE------VEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGAR 156 (291)
Q Consensus 83 ~~ml~~a~~~~------~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~ 156 (291)
+. ...|++.. ..+.++.+|+.+ +.. ++.+|+|||=..=..+.+. . ....+....+.|||||.
T Consensus 395 p~-A~~a~~~v~~N~~~dkVtVI~gd~ee-v~L-PEKVDIIVSEwMG~fLl~E------~---mlevL~Ardr~LKPgGi 462 (637)
T 4gqb_A 395 PN-AVVTLENWQFEEWGSQVTVVSSDMRE-WVA-PEKADIIVSELLGSFADNE------L---SPECLDGAQHFLKDDGV 462 (637)
T ss_dssp HH-HHHHHHHHHHHTTGGGEEEEESCTTT-CCC-SSCEEEEECCCCBTTBGGG------C---HHHHHHHHGGGEEEEEE
T ss_pred HH-HHHHHHHHHhccCCCeEEEEeCccee-ccC-CcccCEEEEEcCccccccc------C---CHHHHHHHHHhcCCCcE
Confidence 84 44554432 237999999955 433 4789999985443333331 1 23567777899999998
Q ss_pred EE
Q 043626 157 AV 158 (291)
Q Consensus 157 lv 158 (291)
++
T Consensus 463 mi 464 (637)
T 4gqb_A 463 SI 464 (637)
T ss_dssp EE
T ss_pred Ec
Confidence 65
No 290
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.37 E-value=8.4e-06 Score=75.22 Aligned_cols=117 Identities=10% Similarity=-0.042 Sum_probs=75.6
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccccc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADK 131 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~ 131 (291)
+.+||||||.+|.++..|+++|..|+|||+.+ | +-.....+.+.++.+|... +....+.||+|+|.++.++
T Consensus 212 G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~-l-~~~l~~~~~V~~~~~d~~~-~~~~~~~~D~vvsDm~~~p------ 282 (375)
T 4auk_A 212 GMWAVDLGACPGGWTYQLVKRNMWVYSVDNGP-M-AQSLMDTGQVTWLREDGFK-FRPTRSNISWMVCDMVEKP------ 282 (375)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCEEEEECSSC-C-CHHHHTTTCEEEECSCTTT-CCCCSSCEEEEEECCSSCH------
T ss_pred CCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhh-c-ChhhccCCCeEEEeCcccc-ccCCCCCcCEEEEcCCCCh------
Confidence 78999999999999999999999999999864 2 2222234568889998744 3344578999999877642
Q ss_pred cCCchHHHHHHHHHHHHHhccCCcEEE-EEEcCCCh-----HHHHHHHHHHHHcCCCC
Q 043626 132 ASHEPRLRLKAFFGSLYRCLARGARAV-FQIYPESV-----AQRELILGAAMRAGFAG 183 (291)
Q Consensus 132 ~~~~p~~~l~~~l~~l~~~LkpgG~lv-~~~~~~~~-----~~~~~i~~~~~~aGF~~ 183 (291)
.. ...++..+...+..++.++ +.+-.... .....+...+...||..
T Consensus 283 -----~~-~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~~~ 334 (375)
T 4auk_A 283 -----AK-VAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINA 334 (375)
T ss_dssp -----HH-HHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred -----HH-hHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHHHhcCcch
Confidence 22 2233333333333333322 33322221 23556777888899975
No 291
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.26 E-value=4.7e-06 Score=74.47 Aligned_cols=119 Identities=12% Similarity=-0.023 Sum_probs=86.6
Q ss_pred CCeEEEEcCCCchhHHHHHHc-------CCeEEEEeCCHH--------------------------HHHHHHhcC-----
Q 043626 52 PRLLLDIGCGSGLSGETLSEN-------GHQWIGLDISQS--------------------------MLNIALERE----- 93 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~-------g~~v~gvDis~~--------------------------ml~~a~~~~----- 93 (291)
+..||||||..|.++..++.. +..++++|+.+. .++.+++++
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 569999999999999887642 578999996421 244455442
Q ss_pred --CcceEEEccCCCCCC-CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHH
Q 043626 94 --VEGDLLLGDMGQGLG-LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRE 170 (291)
Q Consensus 94 --~~~~~~~~D~~~~~~-~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~ 170 (291)
..+.++.+|+.+.++ +..++||+|+.-.-.. .....+|..++..|+|||.+++.-+...+....
T Consensus 187 ~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y-------------~~~~~~Le~~~p~L~pGGiIv~DD~~~~~G~~~ 253 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY-------------ESTWDTLTNLYPKVSVGGYVIVDDYMMCPPCKD 253 (282)
T ss_dssp CSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH-------------HHHHHHHHHHGGGEEEEEEEEESSCTTCHHHHH
T ss_pred CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc-------------ccHHHHHHHHHhhcCCCEEEEEcCCCCCHHHHH
Confidence 347899998866555 3357899999653321 114578999999999999999987754466677
Q ss_pred HHHHHHHHcCCCC
Q 043626 171 LILGAAMRAGFAG 183 (291)
Q Consensus 171 ~i~~~~~~aGF~~ 183 (291)
.+.+.+.+.|+..
T Consensus 254 Av~Ef~~~~~i~~ 266 (282)
T 2wk1_A 254 AVDEYRAKFDIAD 266 (282)
T ss_dssp HHHHHHHHTTCCS
T ss_pred HHHHHHHhcCCce
Confidence 7888888888764
No 292
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.24 E-value=2.8e-06 Score=75.61 Aligned_cols=81 Identities=26% Similarity=0.292 Sum_probs=64.4
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC--cceEEEccCCCC---CC-
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV--EGDLLLGDMGQG---LG- 108 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~--~~~~~~~D~~~~---~~- 108 (291)
.|.+.+++.|.+.+ +..+||.+||.|..+..|++.+..|+|+|.++.+++.|++ .. .+.++++++.+. +.
T Consensus 9 VLl~e~le~L~~~~---gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~-L~~~rv~lv~~~f~~l~~~L~~ 84 (285)
T 1wg8_A 9 VLYQEALDLLAVRP---GGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG-LHLPGLTVVQGNFRHLKRHLAA 84 (285)
T ss_dssp TTHHHHHHHHTCCT---TCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-TCCTTEEEEESCGGGHHHHHHH
T ss_pred HHHHHHHHhhCCCC---CCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh-hccCCEEEEECCcchHHHHHHH
Confidence 35778899998876 6799999999999999999988899999999999999988 53 367788777431 10
Q ss_pred CCCCcccEEEE
Q 043626 109 LRPGVVDGAIS 119 (291)
Q Consensus 109 ~~~~~fD~Vis 119 (291)
...++||+|++
T Consensus 85 ~g~~~vDgIL~ 95 (285)
T 1wg8_A 85 LGVERVDGILA 95 (285)
T ss_dssp TTCSCEEEEEE
T ss_pred cCCCCcCEEEe
Confidence 11256888886
No 293
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.20 E-value=7.6e-06 Score=75.78 Aligned_cols=128 Identities=13% Similarity=0.008 Sum_probs=85.8
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcCCc-------------ceEEEccCCCCCC---CCCCcc
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALEREVE-------------GDLLLGDMGQGLG---LRPGVV 114 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~~~-------------~~~~~~D~~~~~~---~~~~~f 114 (291)
+.+||-||-|.|.....+.+.. ..++.|||++.+++.|++.++. +.++.+|....+. -..+.|
T Consensus 206 pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~y 285 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREF 285 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCE
T ss_pred CCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCce
Confidence 6799999999999999988865 7899999999999999986532 4566777533221 124679
Q ss_pred cEEEECCchhhhccccccCCch--HHHHHHHHHHHHHhccCCcEEEEEEc-CCChHHHHHHHHHHHHcCCCC
Q 043626 115 DGAISISAVQWLCNADKASHEP--RLRLKAFFGSLYRCLARGARAVFQIY-PESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 115 D~Vis~~~l~~l~~~~~~~~~p--~~~l~~~l~~l~~~LkpgG~lv~~~~-~~~~~~~~~i~~~~~~aGF~~ 183 (291)
|+||....-..... + ...| ..-...|++.+.++|+|||+++.+.. +........+.+.+.+. |..
T Consensus 286 DvIIvDl~D~~~s~-~--p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~v-F~~ 353 (381)
T 3c6k_A 286 DYVINDLTAVPIST-S--PEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRL-YCP 353 (381)
T ss_dssp EEEEEECCSSCCCC-C------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTS-SSC
T ss_pred eEEEECCCCCcccC-c--ccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHh-CCc
Confidence 99997532111100 0 0011 11136889999999999999998753 33344555666666665 443
No 294
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.16 E-value=6.1e-05 Score=67.02 Aligned_cols=138 Identities=16% Similarity=0.098 Sum_probs=82.9
Q ss_pred HHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc-C-CeEEEEeCCHHHHHH---HHh-cCCcceEEEc-cCCCCCCCCCC
Q 043626 40 ALELLALPDDGVPRLLLDIGCGSGLSGETLSEN-G-HQWIGLDISQSMLNI---ALE-REVEGDLLLG-DMGQGLGLRPG 112 (291)
Q Consensus 40 ~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~-g-~~v~gvDis~~ml~~---a~~-~~~~~~~~~~-D~~~~~~~~~~ 112 (291)
+.+...+.+ ...||||||++|.++..++.+ | ..|+|+|+...-.+. .++ ...-+.+... |+ ..++ +.
T Consensus 86 i~~~~~l~~---~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv-~~l~--~~ 159 (321)
T 3lkz_A 86 LVERRFLEP---VGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDV-FYRP--SE 159 (321)
T ss_dssp HHHTTSCCC---CEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCT-TSSC--CC
T ss_pred HHHhcCCCC---CCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCH-hhCC--CC
Confidence 344444544 669999999999999977766 5 679999997651100 000 0011556665 66 2233 36
Q ss_pred cccEEEECCchhhhccccccCCchHHH---HHHHHHHHHHhccCC-cEEEEEEc-CCChHHHHHHHHHHHHcCCCCcEEE
Q 043626 113 VVDGAISISAVQWLCNADKASHEPRLR---LKAFFGSLYRCLARG-ARAVFQIY-PESVAQRELILGAAMRAGFAGGVVV 187 (291)
Q Consensus 113 ~fD~Vis~~~l~~l~~~~~~~~~p~~~---l~~~l~~l~~~Lkpg-G~lv~~~~-~~~~~~~~~i~~~~~~aGF~~~~~~ 187 (291)
.+|.|+|... .- +.+|... -..+|.-+...|++| |-|++.+. |+.++.++.+.. +++. |.+ ..+
T Consensus 160 ~~D~ivcDig-eS-------s~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~~~v~e~l~~-lq~~-fgg-~lv 228 (321)
T 3lkz_A 160 CCDTLLCDIG-ES-------SSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYMPKVIEKMEL-LQRR-YGG-GLV 228 (321)
T ss_dssp CCSEEEECCC-CC-------CSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTSHHHHHHHHH-HHHH-HCC-EEE
T ss_pred CCCEEEEECc-cC-------CCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCChHHHHHHHH-HHHH-hCC-EeE
Confidence 7999998643 21 1223221 233677778889998 88888654 555555544433 3332 665 666
Q ss_pred eCCCCCC
Q 043626 188 DYPHSSK 194 (291)
Q Consensus 188 ~~p~~~~ 194 (291)
.-|.|..
T Consensus 229 r~P~SRn 235 (321)
T 3lkz_A 229 RNPLSRN 235 (321)
T ss_dssp CCTTSCT
T ss_pred eCCCCCC
Confidence 7777644
No 295
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.11 E-value=6.5e-05 Score=64.89 Aligned_cols=138 Identities=17% Similarity=0.132 Sum_probs=83.5
Q ss_pred HHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc-C-CeEEEEeCCHHHHHHHH--h--cCCcceEEEc-cCCCCCCCCCC
Q 043626 40 ALELLALPDDGVPRLLLDIGCGSGLSGETLSEN-G-HQWIGLDISQSMLNIAL--E--REVEGDLLLG-DMGQGLGLRPG 112 (291)
Q Consensus 40 ~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~-g-~~v~gvDis~~ml~~a~--~--~~~~~~~~~~-D~~~~~~~~~~ 112 (291)
+.+...+.+ +..||||||++|.++..++.+ | ..|+|+|+-..-.+.-. + -...+.|..+ |+.. + ++.
T Consensus 70 i~ek~~l~~---g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~-~--~~~ 143 (267)
T 3p8z_A 70 FVERNMVIP---EGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFY-L--PPE 143 (267)
T ss_dssp HHHTTSSCC---CEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGG-C--CCC
T ss_pred HHHhcCCCC---CCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceee-c--CCc
Confidence 344444544 679999999999999977766 4 68999999653210000 0 0123677777 7622 2 246
Q ss_pred cccEEEECCchhhhccccccCCchHHH---HHHHHHHHHHhccCCcEEEEEE-cCCChHHHHHHHHHHHHcCCCCcEEEe
Q 043626 113 VVDGAISISAVQWLCNADKASHEPRLR---LKAFFGSLYRCLARGARAVFQI-YPESVAQRELILGAAMRAGFAGGVVVD 188 (291)
Q Consensus 113 ~fD~Vis~~~l~~l~~~~~~~~~p~~~---l~~~l~~l~~~LkpgG~lv~~~-~~~~~~~~~~i~~~~~~aGF~~~~~~~ 188 (291)
++|.|+|...- ++.+|... -..+|.-+...|++ |-+++.+ .|+.++.++.+.. +.+. |.+ ..+.
T Consensus 144 ~~DtllcDIge--------Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~p~v~e~l~~-lq~~-fgg-~lVR 211 (267)
T 3p8z_A 144 KCDTLLCDIGE--------SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYMPTVIEHLER-LQRK-HGG-MLVR 211 (267)
T ss_dssp CCSEEEECCCC--------CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCSHHHHHHHHH-HHHH-HCC-EEEC
T ss_pred cccEEEEecCC--------CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCChhHHHHHHH-HHHH-hCC-EeEe
Confidence 79999987443 11223322 23367777889999 6777754 4666555544433 2322 665 6667
Q ss_pred CCCCCCC
Q 043626 189 YPHSSKS 195 (291)
Q Consensus 189 ~p~~~~~ 195 (291)
-|.|...
T Consensus 212 ~P~SRns 218 (267)
T 3p8z_A 212 NPLSRNS 218 (267)
T ss_dssp CTTSCTT
T ss_pred CCCCCCC
Confidence 7776543
No 296
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.07 E-value=7.3e-06 Score=73.56 Aligned_cols=56 Identities=21% Similarity=0.335 Sum_probs=49.5
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV 94 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~ 94 (291)
.+.+++++.+.. + +..|||++||+|..+..++..|..++|+|+++.+++.|+++..
T Consensus 223 ~l~~~~i~~~~~-~---~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~ 278 (297)
T 2zig_A 223 ELAERLVRMFSF-V---GDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFA 278 (297)
T ss_dssp HHHHHHHHHHCC-T---TCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC-C---CCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHH
Confidence 677888888763 3 6799999999999999999999999999999999999998764
No 297
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.96 E-value=5.5e-05 Score=73.34 Aligned_cols=153 Identities=13% Similarity=0.024 Sum_probs=92.0
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc---------------CCeEEEEeCCHHHHHHHHhcC-----C
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN---------------GHQWIGLDISQSMLNIALERE-----V 94 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~---------------g~~v~gvDis~~ml~~a~~~~-----~ 94 (291)
.+++.+++++.... +.+|+|-+||||.+...+.+. ...++|+|+++.+..+|+-+. .
T Consensus 204 ~Vv~lmv~l~~p~~---~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~ 280 (530)
T 3ufb_A 204 PVVRFMVEVMDPQL---GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE 280 (530)
T ss_dssp HHHHHHHHHHCCCT---TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHhhccCC---CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc
Confidence 45566677776554 679999999999987665532 246999999999999988653 2
Q ss_pred cceEEEccCCCCCC----CCCCcccEEEECCchhhhcccc-----ccCCchHHHHHHHHHHHHHhcc-------CCcEEE
Q 043626 95 EGDLLLGDMGQGLG----LRPGVVDGAISISAVQWLCNAD-----KASHEPRLRLKAFFGSLYRCLA-------RGARAV 158 (291)
Q Consensus 95 ~~~~~~~D~~~~~~----~~~~~fD~Vis~~~l~~l~~~~-----~~~~~p~~~l~~~l~~l~~~Lk-------pgG~lv 158 (291)
...+..+|... .+ .....||+||+|..+.--...+ .........-..|+..+.+.|+ +||++.
T Consensus 281 ~~~I~~~dtL~-~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~a 359 (530)
T 3ufb_A 281 YPRIDPENSLR-FPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAA 359 (530)
T ss_dssp CCEEECSCTTC-SCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEE
T ss_pred ccccccccccc-CchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEE
Confidence 23566666422 12 1234799999997663100000 0000011113467888888887 699999
Q ss_pred EEEcCC---ChHHHHHHHHHHHHcCCCCcEEEeCCCC
Q 043626 159 FQIYPE---SVAQRELILGAAMRAGFAGGVVVDYPHS 192 (291)
Q Consensus 159 ~~~~~~---~~~~~~~i~~~~~~aGF~~~~~~~~p~~ 192 (291)
+.+... .......|.+.+.+.+.-. .++..|..
T Consensus 360 vVlP~g~Lf~~~~~~~iRk~Lle~~~l~-aII~LP~~ 395 (530)
T 3ufb_A 360 VVVPNGTLFSDGISARIKEELLKNFNLH-TIVRLPEG 395 (530)
T ss_dssp EEEEHHHHHCCTHHHHHHHHHHHHSEEE-EEEECCTT
T ss_pred EEecchhhhccchHHHHHHHHhhcCEEE-EEEECCcc
Confidence 876321 1112234666666654332 55666543
No 298
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.81 E-value=5.6e-05 Score=67.25 Aligned_cols=140 Identities=16% Similarity=0.134 Sum_probs=80.0
Q ss_pred CCeEEEEcC------CCchhHHHHHH---cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCc
Q 043626 52 PRLLLDIGC------GSGLSGETLSE---NGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGc------GsG~~~~~L~~---~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~ 122 (291)
+++|||+|+ -+|.. .+.+ .|..++++|+.+-.. .. ..++++|..+ +. ..+.||+|+|-++
T Consensus 110 gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s------da-~~~IqGD~~~-~~-~~~k~DLVISDMA 178 (344)
T 3r24_A 110 NMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS------DA-DSTLIGDCAT-VH-TANKWDLIISDMY 178 (344)
T ss_dssp TCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC------SS-SEEEESCGGG-EE-ESSCEEEEEECCC
T ss_pred CCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc------CC-CeEEEccccc-cc-cCCCCCEEEecCC
Confidence 789999996 55663 3333 246999999976321 11 2458888633 21 2478999999877
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeCCCCCCCCcEEEEE
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFLVL 202 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~p~~~~~~~~~l~l 202 (291)
..--.+.+........-...++.-+.+.|+|||.|++.++..... +.+.+ +.+ -|....++. +.+........++
T Consensus 179 PNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~--~~L~~-lrk-~F~~VK~fK-~ASRa~SsEvYLV 253 (344)
T 3r24_A 179 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN--ADLYK-LMG-HFSWWTAFV-TNVNASSSEAFLI 253 (344)
T ss_dssp CTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC--HHHHH-HHT-TEEEEEEEE-EGGGTTSSCEEEE
T ss_pred CCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCH--HHHHH-HHh-hCCeEEEEC-CCCCCCCeeEEEE
Confidence 543222111110111124567777889999999999988765443 22333 333 687633333 4444333333333
Q ss_pred eeCCC
Q 043626 203 TCGPP 207 (291)
Q Consensus 203 ~~g~~ 207 (291)
..|.+
T Consensus 254 G~gfK 258 (344)
T 3r24_A 254 GANYL 258 (344)
T ss_dssp EEEEC
T ss_pred eeecc
Confidence 34443
No 299
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.60 E-value=0.00015 Score=63.69 Aligned_cols=56 Identities=27% Similarity=0.268 Sum_probs=49.0
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV 94 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~ 94 (291)
.+.+++++.... + +..|||..||+|..+......|..++|+|+++.+++.|+++..
T Consensus 200 ~l~~~~i~~~~~-~---~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~ 255 (260)
T 1g60_A 200 DLIERIIRASSN-P---NDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLN 255 (260)
T ss_dssp HHHHHHHHHHCC-T---TCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC-C---CCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHH
Confidence 677788887653 2 6799999999999999999999999999999999999998754
No 300
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.54 E-value=0.00021 Score=65.48 Aligned_cols=131 Identities=14% Similarity=0.094 Sum_probs=81.6
Q ss_pred CCeEEEEcCCCchhHHHHHHcC---CeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC--CCCCcccEEEECCchhhh
Q 043626 52 PRLLLDIGCGSGLSGETLSENG---HQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLG--LRPGVVDGAISISAVQWL 126 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g---~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~--~~~~~fD~Vis~~~l~~l 126 (291)
+.+|||+.||.|.++.-+...| ..++++|+++.+++..+.+.....++.+|+.+..+ +....+|+++....-|.+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~f 81 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPF 81 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC----
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcch
Confidence 4689999999999999999888 36999999999999999999887888999854221 111268999998776655
Q ss_pred cccccc--CCchHHHH-HHHHHHHHHhcc--CCcEEEEEEcC-CChHHHHHHHHHHHHcCCCC
Q 043626 127 CNADKA--SHEPRLRL-KAFFGSLYRCLA--RGARAVFQIYP-ESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 127 ~~~~~~--~~~p~~~l-~~~l~~l~~~Lk--pgG~lv~~~~~-~~~~~~~~i~~~~~~aGF~~ 183 (291)
..+.+. ..+++..+ ..++ .+...++ |.-.++=.+.. .+......+...+...||..
T Consensus 82 S~ag~~~g~~d~r~~l~~~~~-~~i~~~~~~P~~~~~ENV~~l~~~~~~~~i~~~l~~~GY~v 143 (343)
T 1g55_A 82 TRIGRQGDMTDSRTNSFLHIL-DILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQY 143 (343)
T ss_dssp --------------CHHHHHH-HHGGGCSSCCSEEEEEEETTGGGSHHHHHHHHHHHHTTEEE
T ss_pred hhcCCcCCccCccchHHHHHH-HHHHHhcCCCCEEEEeCCccccCHHHHHHHHHHHHHCCCee
Confidence 433211 11222112 2222 3344455 65333322322 13356778889999999875
No 301
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.38 E-value=0.0025 Score=57.90 Aligned_cols=129 Identities=12% Similarity=-0.038 Sum_probs=87.0
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhcccc
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNAD 130 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~ 130 (291)
..++||+.||.|.++.-+...| ..+.++|+++.+++..+.++.... .+|+.+..+..-..+|+|+.....|-+..+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~gpPCQ~fS~ag 88 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCAGFPCQAFSISG 88 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEEECCCTTTCTTS
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEECCCCCCcchhc
Confidence 4689999999999999999998 468889999999999998876543 6777443222223599999987777665443
Q ss_pred cc--CCchHHHHHHHHHHHHHhccCCcEEEEE-EcC----CChHHHHHHHHHHHHcCCCC
Q 043626 131 KA--SHEPRLRLKAFFGSLYRCLARGARAVFQ-IYP----ESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 131 ~~--~~~p~~~l~~~l~~l~~~LkpgG~lv~~-~~~----~~~~~~~~i~~~~~~aGF~~ 183 (291)
+. ..+++..+-.-+-.+...++|.- +++. +-. ........+...+...||..
T Consensus 89 ~~~g~~d~r~~L~~~~~r~i~~~~P~~-~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v 147 (327)
T 2c7p_A 89 KQKGFEDSRGTLFFDIARIVREKKPKV-VFMENVKNFASHDNGNTLEVVKNTMNELDYSF 147 (327)
T ss_dssp CCCGGGSTTSCHHHHHHHHHHHHCCSE-EEEEEEGGGGTGGGGHHHHHHHHHHHHTTBCC
T ss_pred ccCCCcchhhHHHHHHHHHHHhccCcE-EEEeCcHHHHhccccHHHHHHHHHHHhCCCEE
Confidence 22 12343323223334445578863 4443 321 12346778899999999986
No 302
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.36 E-value=0.002 Score=59.63 Aligned_cols=130 Identities=15% Similarity=0.064 Sum_probs=86.9
Q ss_pred CeEEEEcCCCchhHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC--C-----CCCcccEEEECCchh
Q 043626 53 RLLLDIGCGSGLSGETLSENGH-QWIGLDISQSMLNIALEREVEGDLLLGDMGQGLG--L-----RPGVVDGAISISAVQ 124 (291)
Q Consensus 53 ~~VLDiGcGsG~~~~~L~~~g~-~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~--~-----~~~~fD~Vis~~~l~ 124 (291)
.++||+.||.|.++.-+...|. .+.++|+++.+++..+.+.+...++++|+.+..+ + ..+.+|+|+....-|
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpPCQ 82 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPPCQ 82 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCCCC
Confidence 5899999999999999999985 5679999999999999999888889999854321 1 346899999876655
Q ss_pred hhcccccc-CCchHHHHHHHHHHHHHhccCCcEEEEEEcC----CChHHHHHHHHHHHHcCCCC
Q 043626 125 WLCNADKA-SHEPRLRLKAFFGSLYRCLARGARAVFQIYP----ESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 125 ~l~~~~~~-~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~----~~~~~~~~i~~~~~~aGF~~ 183 (291)
-+..+.+. ..+++..+-.-+-.+...++|.-.++=.+-. ......+.+. .+...||..
T Consensus 83 ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~~~v~ENV~gl~s~~~~~~~~~i~-~l~~~GY~v 145 (376)
T 3g7u_A 83 GFSSIGKGNPDDSRNQLYMHFYRLVSELQPLFFLAENVPGIMQEKYSGIRNKAF-NLVSGDYDI 145 (376)
T ss_dssp TTC-------CHHHHHHHHHHHHHHHHHCCSEEEEEECTTTTCGGGHHHHHHHH-HHHHTTEEE
T ss_pred CcccccCCCCCCchHHHHHHHHHHHHHhCCCEEEEecchHhhccCcHHHHHHHH-HHHcCCCcc
Confidence 54433222 2334444433344555667886433322211 2233566777 889999864
No 303
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.25 E-value=0.00053 Score=60.92 Aligned_cols=125 Identities=10% Similarity=-0.113 Sum_probs=91.4
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC---cceEEEccCCCCCC---CCCCcccEEEECCchhh
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREV---EGDLLLGDMGQGLG---LRPGVVDGAISISAVQW 125 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~---~~~~~~~D~~~~~~---~~~~~fD~Vis~~~l~~ 125 (291)
+..+||+-+|||.++..+...+..++.||.++..+...+++.. .+.++..|....+. -+...||+|+.-.....
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPYe~ 171 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYER 171 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCCCS
T ss_pred CCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCCCC
Confidence 4578999999999999988877899999999999999998874 36778888533221 12357999997654431
Q ss_pred hccccccCCchHHHHHHHHHHHHH--hccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEe
Q 043626 126 LCNADKASHEPRLRLKAFFGSLYR--CLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVD 188 (291)
Q Consensus 126 l~~~~~~~~~p~~~l~~~l~~l~~--~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~ 188 (291)
-. .+..++..+.. .+.++|.+++...--.....+.+.+.+.+.|. ..+.+.
T Consensus 172 k~-----------~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~~~~~~~~l~~~~~-~~l~~e 224 (283)
T 2oo3_A 172 KE-----------EYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISS-KSVRIE 224 (283)
T ss_dssp TT-----------HHHHHHHHHHHHHHHCTTSEEEEEEEESSHHHHHHHHHHHHHHCS-SEEEEE
T ss_pred Cc-----------HHHHHHHHHHHhCccCCCeEEEEEEeccchHHHHHHHHHHHhcCC-CeEEEE
Confidence 11 14556665654 46789999988655666778888888988888 534443
No 304
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.25 E-value=5.4e-05 Score=85.24 Aligned_cols=98 Identities=13% Similarity=0.079 Sum_probs=51.7
Q ss_pred CCeEEEEcCCCchhHHHHHHc-------CCeEEEEeCCHHHHHHHHhcCCcceEEE--ccCCCCCCCCCCcccEEEECCc
Q 043626 52 PRLLLDIGCGSGLSGETLSEN-------GHQWIGLDISQSMLNIALEREVEGDLLL--GDMGQGLGLRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~-------g~~v~gvDis~~ml~~a~~~~~~~~~~~--~D~~~~~~~~~~~fD~Vis~~~ 122 (291)
..+||+||.|+|..+..+.+. ...++..|+|+...+.|++++...++.. .|.....+|...+||+||+..+
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~v 1320 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNCA 1320 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEECC
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEccc
Confidence 569999999999876554432 1378999999888877777654433333 2331212445678999999999
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+|-..+ +...+.++.++|+|||.+++.
T Consensus 1321 l~~t~~-----------~~~~l~~~~~lL~p~G~l~~~ 1347 (2512)
T 2vz8_A 1321 LATLGD-----------PAVAVGNMAATLKEGGFLLLH 1347 (2512)
T ss_dssp -------------------------------CCEEEEE
T ss_pred cccccc-----------HHHHHHHHHHhcCCCcEEEEE
Confidence 976554 668899999999999999885
No 305
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.23 E-value=0.0045 Score=55.72 Aligned_cols=129 Identities=13% Similarity=0.065 Sum_probs=90.9
Q ss_pred CeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhcccc-
Q 043626 53 RLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNAD- 130 (291)
Q Consensus 53 ~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~- 130 (291)
++|||+-||.|.+..-|.+.| ..+.++|+++.+++.-+.+++. .++.+|+.+..+-.-..+|+++....-|-+..+.
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~~-~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag~ 79 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHSA-KLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGGS 79 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCCS-EEEESCGGGCCGGGSCCCSEEECCCCGGGTEETTE
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCCC-CcccCChhhCCHhhCCcccEEEecCCCCCcCCCCC
Confidence 479999999999999999988 4567999999999988888764 6788898542222234689999887777665433
Q ss_pred -ccCCchHHHHHHHHHHHHHhccCCcEEEEEEc-----CCChHHHHHHHHHHHHcCCCC
Q 043626 131 -KASHEPRLRLKAFFGSLYRCLARGARAVFQIY-----PESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 131 -~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~-----~~~~~~~~~i~~~~~~aGF~~ 183 (291)
+...+++..+-.-+-.+...++|. .+++.-- .........+...+...||..
T Consensus 80 ~~g~~d~R~~L~~~~~r~i~~~~Pk-~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v 137 (331)
T 3ubt_Y 80 LRGIDDPRGKLFYEYIRILKQKKPI-FFLAENVKGMMAQRHNKAVQEFIQEFDNAGYDV 137 (331)
T ss_dssp ECCTTCGGGHHHHHHHHHHHHHCCS-EEEEEECCGGGGCTTSHHHHHHHHHHHHHTEEE
T ss_pred ccCCCCchhHHHHHHHHHHhccCCe-EEEeeeecccccccccchhhhhhhhhccCCcEE
Confidence 223456544544444566677886 3444322 234467788899999999874
No 306
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.22 E-value=0.00087 Score=61.56 Aligned_cols=70 Identities=16% Similarity=0.150 Sum_probs=55.7
Q ss_pred HHHHHHHHHhCCCCC---CCCCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcC--CcceEEEccCC
Q 043626 35 KLSERALELLALPDD---GVPRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALERE--VEGDLLLGDMG 104 (291)
Q Consensus 35 ~~~~~~lelL~~~~~---~~~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~--~~~~~~~~D~~ 104 (291)
.+++++++.+.+.+. ..+..|||||.|.|.+|..|++. ...+++|++++.++...++.. .+..++.+|+.
T Consensus 39 ~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l 115 (353)
T 1i4w_A 39 TVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPY 115 (353)
T ss_dssp HHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTT
T ss_pred HHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCcc
Confidence 567788888876530 01479999999999999999986 579999999999999887754 35788888873
No 307
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.22 E-value=0.00021 Score=64.94 Aligned_cols=82 Identities=16% Similarity=0.181 Sum_probs=62.4
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc-C--CeEEEEeCCHHHHHHHHhcCC--cceEEEccCCCCC--
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN-G--HQWIGLDISQSMLNIALEREV--EGDLLLGDMGQGL-- 107 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~-g--~~v~gvDis~~ml~~a~~~~~--~~~~~~~D~~~~~-- 107 (291)
.|.+.+++.|.+.+ +..+||..||.|..+..|++. + ..|+|+|.++.+++.|+ +.. .+.+++++..+..
T Consensus 44 VLl~Evl~~L~i~p---ggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~~~Rv~lv~~nF~~l~~~ 119 (347)
T 3tka_A 44 VLLDEAVNGLNIRP---DGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TIDDPRFSIIHGPFSALGEY 119 (347)
T ss_dssp TTTHHHHHHTCCCT---TCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCCCTTEEEEESCGGGHHHH
T ss_pred ccHHHHHHhhCCCC---CCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhcCCcEEEEeCCHHHHHHH
Confidence 46788999998876 789999999999999999886 3 79999999999999984 432 3567777764311
Q ss_pred -C-CC-CCcccEEEEC
Q 043626 108 -G-LR-PGVVDGAISI 120 (291)
Q Consensus 108 -~-~~-~~~fD~Vis~ 120 (291)
+ .. .+++|+|+..
T Consensus 120 L~~~g~~~~vDgILfD 135 (347)
T 3tka_A 120 VAERDLIGKIDGILLD 135 (347)
T ss_dssp HHHTTCTTCEEEEEEE
T ss_pred HHhcCCCCcccEEEEC
Confidence 1 00 1368888875
No 308
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.84 E-value=0.0073 Score=54.79 Aligned_cols=130 Identities=11% Similarity=0.060 Sum_probs=83.7
Q ss_pred CCeEEEEcCCCchhHHHHHHcC---CeE-EEEeCCHHHHHHHHhcCCcceEEEccCCCCCC--CCCCcccEEEECCchhh
Q 043626 52 PRLLLDIGCGSGLSGETLSENG---HQW-IGLDISQSMLNIALEREVEGDLLLGDMGQGLG--LRPGVVDGAISISAVQW 125 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g---~~v-~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~--~~~~~fD~Vis~~~l~~ 125 (291)
..+++|+.||.|.+..-+...| ..+ .++|+++.+++..+.+++.. ++.+|+.+..+ ++...+|+++....-|.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ~ 88 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISIKQIESLNCNTWFMSPPCQP 88 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCHHHHHHTCCCEEEECCCCTT
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCHHHhccCCCCEEEecCCccC
Confidence 5689999999999999999988 345 69999999999998888765 66788844221 11236899998877665
Q ss_pred h--ccccc--cCCchHHHH-HHHHHHHHHhc--cCCcEEEEEEcC--CChHHHHHHHHHHHHcCCCC
Q 043626 126 L--CNADK--ASHEPRLRL-KAFFGSLYRCL--ARGARAVFQIYP--ESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 126 l--~~~~~--~~~~p~~~l-~~~l~~l~~~L--kpgG~lv~~~~~--~~~~~~~~i~~~~~~aGF~~ 183 (291)
+ ..+.+ ...+++..+ ..++..+...+ +|. .+++.--+ ........|.+.+...||.-
T Consensus 89 fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~-~~~lENV~gl~~~~~~~~i~~~l~~~GY~v 154 (327)
T 3qv2_A 89 YNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPK-HIFIENVPLFKESLVFKEIYNILIKNQYYI 154 (327)
T ss_dssp CSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCS-EEEEEECGGGGGSHHHHHHHHHHHHTTCEE
T ss_pred cccccCCCCCCCccccchhHHHHHHHHHHHhccCCC-EEEEEchhhhcChHHHHHHHHHHHhCCCEE
Confidence 5 32211 123444322 22222133344 454 44443222 12345778899999999975
No 309
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.80 E-value=0.0033 Score=56.88 Aligned_cols=57 Identities=25% Similarity=0.427 Sum_probs=49.2
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCc
Q 043626 35 KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVE 95 (291)
Q Consensus 35 ~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~ 95 (291)
.+.+++++....+ +..|||.-||+|..+......|..++|+|+++..++.+.++...
T Consensus 240 ~l~~~~i~~~~~~----~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 240 KLPEFFIRMLTEP----DDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp HHHHHHHHHHCCT----TCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSC
T ss_pred HHHHHHHHHhCCC----CCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHh
Confidence 5667777766432 67999999999999999999999999999999999999998754
No 310
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.68 E-value=0.025 Score=50.84 Aligned_cols=104 Identities=15% Similarity=0.158 Sum_probs=77.1
Q ss_pred CCeEEEEcCCCchhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCC--------cceEEEccCCCCC-------CCCCCccc
Q 043626 52 PRLLLDIGCGSGLSGETLSE-NGHQWIGLDISQSMLNIALEREV--------EGDLLLGDMGQGL-------GLRPGVVD 115 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~--------~~~~~~~D~~~~~-------~~~~~~fD 115 (291)
...||+||||-=.....+.. .+..|+-|| .|.++...++... ...++.+|+.+.+ .|.....=
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~Pt 181 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSART 181 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSCE
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCCE
Confidence 34799999998888777763 357999999 5888887766542 2467888886421 13334556
Q ss_pred EEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCC
Q 043626 116 GAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES 165 (291)
Q Consensus 116 ~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~ 165 (291)
++++-.+++|+.. .....+|..+...+.||+.+++...+.+
T Consensus 182 ~~i~Egvl~Yl~~---------~~~~~ll~~l~~~~~~gs~l~~d~~~~~ 222 (310)
T 2uyo_A 182 AWLAEGLLMYLPA---------TAQDGLFTEIGGLSAVGSRIAVETSPLH 222 (310)
T ss_dssp EEEECSCGGGSCH---------HHHHHHHHHHHHTCCTTCEEEEECCCTT
T ss_pred EEEEechHhhCCH---------HHHHHHHHHHHHhCCCCeEEEEEecCCC
Confidence 7888899999854 3477899999999999999999876543
No 311
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.52 E-value=0.0029 Score=56.85 Aligned_cols=124 Identities=19% Similarity=0.219 Sum_probs=75.2
Q ss_pred CCeEEEEcCCCchhHHHHH----HcC----CeEEEEeCC------------HHHHHHHHhcCC-------cceEEEccCC
Q 043626 52 PRLLLDIGCGSGLSGETLS----ENG----HQWIGLDIS------------QSMLNIALEREV-------EGDLLLGDMG 104 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~----~~g----~~v~gvDis------------~~ml~~a~~~~~-------~~~~~~~D~~ 104 (291)
..+|||+|-|+|....... +.+ .+++.+|.. ....+......+ ..+++.+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 5689999999998654332 222 456777742 122222222222 1367788875
Q ss_pred CCCC-CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 105 QGLG-LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 105 ~~~~-~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
+.++ +....||+++.-. -....+|..=-..+|+.++++++|||.++ +|... ..+...|..+||.-
T Consensus 177 ~~l~~l~~~~~Da~flDg--------FsP~kNPeLWs~e~f~~l~~~~~pgg~la--TYtaa----g~VRR~L~~aGF~V 242 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDA--------FSPYKNPELWTLDFLSLIKERIDEKGYWV--SYSSS----LSVRKSLLTLGFKV 242 (308)
T ss_dssp HHGGGCCSCCEEEEEECC--------SCTTTSGGGGSHHHHHHHHTTEEEEEEEE--ESCCC----HHHHHHHHHTTCEE
T ss_pred HHHhhhcccceeEEEeCC--------CCcccCcccCCHHHHHHHHHHhCCCcEEE--EEeCc----HHHHHHHHHCCCEE
Confidence 5554 3345799998632 11122343223689999999999999776 55443 34667789999975
Q ss_pred cEEEeC
Q 043626 184 GVVVDY 189 (291)
Q Consensus 184 ~~~~~~ 189 (291)
..+.-+
T Consensus 243 ~k~~G~ 248 (308)
T 3vyw_A 243 GSSREI 248 (308)
T ss_dssp EEEECC
T ss_pred EecCCC
Confidence 444333
No 312
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.48 E-value=0.0088 Score=54.38 Aligned_cols=130 Identities=16% Similarity=0.158 Sum_probs=85.5
Q ss_pred CCeEEEEcCCCchhHHHHHHcC---CeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC--CCCCcccEEEECCchhhh
Q 043626 52 PRLLLDIGCGSGLSGETLSENG---HQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLG--LRPGVVDGAISISAVQWL 126 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g---~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~--~~~~~fD~Vis~~~l~~l 126 (291)
+.+++|+.||.|.+..-+...| ..+.++|+++..++..+.+++...++..|+.+..+ ++...+|+++....-|.+
T Consensus 3 ~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~f 82 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPF 82 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCCCCS
T ss_pred CCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCCcch
Confidence 4589999999999999998887 35789999999999999999888888889844221 122368999987666654
Q ss_pred ccccc--cCCchHHH-HHHHHHHHHHhcc-CCcEEEEEEcCC--ChHHHHHHHHHHHHcCCCC
Q 043626 127 CNADK--ASHEPRLR-LKAFFGSLYRCLA-RGARAVFQIYPE--SVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 127 ~~~~~--~~~~p~~~-l~~~l~~l~~~Lk-pgG~lv~~~~~~--~~~~~~~i~~~~~~aGF~~ 183 (291)
..+.+ ...+++.. +..++ .+...++ |. .+++.--+. +....+.+.+.+...||.-
T Consensus 83 S~ag~~~~~~d~r~~L~~~~~-r~i~~~~~P~-~~vlENV~gl~~~~~~~~i~~~l~~~GY~v 143 (333)
T 4h0n_A 83 TRNGKYLDDNDPRTNSFLYLI-GILDQLDNVD-YILMENVKGFENSTVRNLFIDKLKECNFIY 143 (333)
T ss_dssp EETTEECCTTCTTSCCHHHHH-HHGGGCTTCC-EEEEEECTTGGGSHHHHHHHHHHHHTTEEE
T ss_pred hhhhhccCCcCcccccHHHHH-HHHHHhcCCC-EEEEecchhhhhhhHHHHHHHHHHhCCCeE
Confidence 43221 12233322 22222 3334444 64 344443222 2235678899999999875
No 313
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.45 E-value=0.005 Score=55.65 Aligned_cols=58 Identities=24% Similarity=0.297 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHcCCeEEEEeCCH---HHHHHHHhcCCc
Q 043626 34 AKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQ---SMLNIALEREVE 95 (291)
Q Consensus 34 ~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~---~ml~~a~~~~~~ 95 (291)
..+.+++++....+ +..|||.-||+|..+......|..++|+|+++ ..++.+.++...
T Consensus 229 ~~l~~~~i~~~~~~----~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 229 AAVIERLVRALSHP----GSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp HHHHHHHHHHHSCT----TCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhCCC----CCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHH
Confidence 36777888876533 67999999999999999999999999999999 999999998754
No 314
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.42 E-value=0.011 Score=52.81 Aligned_cols=110 Identities=19% Similarity=0.125 Sum_probs=76.5
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCe---EEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC--CC-CCcccEEEECCchhh
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQ---WIGLDISQSMLNIALEREVEGDLLLGDMGQGLG--LR-PGVVDGAISISAVQW 125 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~---v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~--~~-~~~fD~Vis~~~l~~ 125 (291)
..++||+-||.|.++.-+...|.. +.++|+++..++..+.+.+...++.+|+.+..+ ++ .+.+|+++....-|-
T Consensus 16 ~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~ggpPCQ~ 95 (295)
T 2qrv_A 16 PIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGGSPCND 95 (295)
T ss_dssp CEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEECCCCGG
T ss_pred CCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEecCCCcc
Confidence 568999999999999999999844 589999999999888888776788899854221 11 246999999887776
Q ss_pred hcccc-c-c-CCchHHHHHHHHHHHHHhccCCc------EEEEEE
Q 043626 126 LCNAD-K-A-SHEPRLRLKAFFGSLYRCLARGA------RAVFQI 161 (291)
Q Consensus 126 l~~~~-~-~-~~~p~~~l~~~l~~l~~~LkpgG------~lv~~~ 161 (291)
+..+. + . ..+++..+-.-+-.+...++|.. .+++.-
T Consensus 96 fS~ag~~r~g~~d~r~~L~~~~~rii~~~~P~~~~~~P~~~l~EN 140 (295)
T 2qrv_A 96 LSIVNPARKGLYEGTGRLFFEFYRLLHDARPKEGDDRPFFWLFEN 140 (295)
T ss_dssp GBTTCTTCCTTTSTTTTHHHHHHHHHHHHSCCTTCCCCCEEEEEE
T ss_pred ccccCccccccccccchhHHHHHHHHHHhCcccccCCccEEEEEc
Confidence 65443 1 1 23344333333344555667762 666653
No 315
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.05 E-value=0.18 Score=45.71 Aligned_cols=98 Identities=11% Similarity=0.137 Sum_probs=71.0
Q ss_pred CCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcC--------------------------CcceEEEccC
Q 043626 52 PRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALERE--------------------------VEGDLLLGDM 103 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~--------------------------~~~~~~~~D~ 103 (291)
...|+.+|||.......|... +..|+-||. |.+++.-++.. ....++.+|+
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 568999999999999999874 478889998 77666544331 2356788888
Q ss_pred CCC---------CCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEE-EEE
Q 043626 104 GQG---------LGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAV-FQI 161 (291)
Q Consensus 104 ~~~---------~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv-~~~ 161 (291)
.+. .+ .++...++|+-.++.|+. ......+|+.+...+ |+|.++ +..
T Consensus 177 ~d~~w~~~ll~~~~-d~~~Ptl~iaEgvL~YL~---------~~~~~~ll~~ia~~~-~~~~~v~~e~ 233 (334)
T 1rjd_A 177 NDITETTRLLDVCT-KREIPTIVISECLLCYMH---------NNESQLLINTIMSKF-SHGLWISYDP 233 (334)
T ss_dssp TCHHHHHHHHHTTC-CTTSCEEEEEESCGGGSC---------HHHHHHHHHHHHHHC-SSEEEEEEEE
T ss_pred CCcHHHHHHHHhcC-CCCCCEEEEEcchhhCCC---------HHHHHHHHHHHHhhC-CCcEEEEEec
Confidence 651 12 345678999999999984 344778898888887 666664 543
No 316
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=96.01 E-value=0.027 Score=49.68 Aligned_cols=136 Identities=18% Similarity=0.050 Sum_probs=80.8
Q ss_pred cCCCchhHHHHHHc-CCeEEEEeCCHHHHHHHHhc------CCcceEE-EccCCCCCCCCCCcccEEEECCchhhhcccc
Q 043626 59 GCGSGLSGETLSEN-GHQWIGLDISQSMLNIALER------EVEGDLL-LGDMGQGLGLRPGVVDGAISISAVQWLCNAD 130 (291)
Q Consensus 59 GcGsG~~~~~L~~~-g~~v~gvDis~~ml~~a~~~------~~~~~~~-~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~ 130 (291)
.++.|.....+.+. |+++..||-.-. +-.++ .+..+++ ..|++. |...+.+|+|+|+++...-
T Consensus 149 ~~~~~~~~~~~~k~~g~~vl~v~~~~~---~p~k~v~wi~Pi~GAt~~~~lDfg~--p~~~~k~DvV~SDMApn~s---- 219 (320)
T 2hwk_A 149 EHPQSDFSSFVSKLKGRTVLVVGEKLS---VPGKMVDWLSDRPEATFRARLDLGI--PGDVPKYDIIFVNVRTPYK---- 219 (320)
T ss_dssp CCCCCCCHHHHHTSSCSEEEEEESCCC---CTTSEEEEEESSTTCSEECCGGGCS--CTTSCCEEEEEEECCCCCC----
T ss_pred ccCCCCHHHHHhhCCCcEEEEEecccc---cCCceeEeeccCCCceeecccccCC--ccccCcCCEEEEcCCCCCC----
Confidence 36777777777776 788888862110 00111 1123444 556543 3334779999998664321
Q ss_pred ccCCc-----hHHH-HHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeCCCCCCCCcEEEEEee
Q 043626 131 KASHE-----PRLR-LKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFLVLTC 204 (291)
Q Consensus 131 ~~~~~-----p~~~-l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~p~~~~~~~~~l~l~~ 204 (291)
.|+ .+.+ +.-++..+..+|+|||.+++..|...+...+.+...+.+. |....++.-+.+.. ....++++.
T Consensus 220 --Gh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~-F~~Vr~vKP~ASR~-StEvf~La~ 295 (320)
T 2hwk_A 220 --YHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQ-FKFSRVCKPKSSLE-ETEVLFVFI 295 (320)
T ss_dssp --SCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTT-EEEEEEECCTTCCS-TTCEEEEEE
T ss_pred --CccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHh-cceeeeeCCCCccc-cceEEEEEE
Confidence 111 1111 2336677789999999999999988766667777766655 88744545555555 444455555
Q ss_pred CCC
Q 043626 205 GPP 207 (291)
Q Consensus 205 g~~ 207 (291)
|.+
T Consensus 296 gf~ 298 (320)
T 2hwk_A 296 GYD 298 (320)
T ss_dssp EEC
T ss_pred eec
Confidence 543
No 317
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.87 E-value=0.0056 Score=55.30 Aligned_cols=100 Identities=16% Similarity=0.198 Sum_probs=65.4
Q ss_pred HHHHHhCCCCCCCCCeEEEEcCCC-chhHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC----CCCC
Q 043626 39 RALELLALPDDGVPRLLLDIGCGS-GLSGETLSEN-GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLG----LRPG 112 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiGcGs-G~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~----~~~~ 112 (291)
.+++...+.+ +.+||-+|+|. |.....+++. |.+|+++|.++..++.+++.... .++...- ..+. -..+
T Consensus 157 ~~l~~~~~~~---g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~~i~~~~-~~~~~~~~~~~g 231 (340)
T 3s2e_A 157 KGLKVTDTRP---GQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAE-VAVNARD-TDPAAWLQKEIG 231 (340)
T ss_dssp HHHHTTTCCT---TSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS-EEEETTT-SCHHHHHHHHHS
T ss_pred HHHHHcCCCC---CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCC-EEEeCCC-cCHHHHHHHhCC
Confidence 3445555554 67999999975 7777777764 78999999999999998775433 1222111 1100 0123
Q ss_pred cccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 113 VVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 113 ~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
.+|+|+-...- ...+..+.++|+++|++++.
T Consensus 232 ~~d~vid~~g~-----------------~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 232 GAHGVLVTAVS-----------------PKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp SEEEEEESSCC-----------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEEeCCC-----------------HHHHHHHHHHhccCCEEEEe
Confidence 68888854221 24677888999999999874
No 318
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.84 E-value=0.01 Score=58.91 Aligned_cols=118 Identities=20% Similarity=0.238 Sum_probs=76.5
Q ss_pred CCeEEEEcCCCchhHHHHHHc------------C--CeEEEEeC---CHHHHHHHHhcCC--------------------
Q 043626 52 PRLLLDIGCGSGLSGETLSEN------------G--HQWIGLDI---SQSMLNIALEREV-------------------- 94 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~------------g--~~v~gvDi---s~~ml~~a~~~~~-------------------- 94 (291)
..+|||+|.|+|.....+.+. . .+++.++. +...+..+....+
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 579999999999977666542 1 57999998 6666665443321
Q ss_pred ----------cceEEEccCCCCCCCC----CCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 95 ----------EGDLLLGDMGQGLGLR----PGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 95 ----------~~~~~~~D~~~~~~~~----~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
.++++.+|+.+.++-- .+.+|.++.... ....||..=...+|..+++++++||.+.
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f--------~p~~np~~w~~~~~~~l~~~~~~g~~~~-- 208 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGF--------APAKNPDMWNEQLFNAMARMTRPGGTFS-- 208 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSS--------CC--CCTTCSHHHHHHHHHHEEEEEEEE--
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCC--------CCCCChhhhhHHHHHHHHHHhCCCCEEE--
Confidence 1356777775544421 467999886421 1111222112588999999999999755
Q ss_pred EcCCChHHHHHHHHHHHHcCCCC
Q 043626 161 IYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 161 ~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
+|... ..+...+.++||..
T Consensus 209 t~~~~----~~vr~~l~~aGf~~ 227 (689)
T 3pvc_A 209 TFTAA----GFVRRGLQQAGFNV 227 (689)
T ss_dssp ESCCC----HHHHHHHHHTTCEE
T ss_pred eccCc----HHHHHHHHhCCeEE
Confidence 33333 35677788999975
No 319
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.75 E-value=0.043 Score=49.79 Aligned_cols=100 Identities=18% Similarity=0.129 Sum_probs=64.6
Q ss_pred HHHHhCCCCCCCCCeEEEEcCCC-chhHHHHHHc-CC-eEEEEeCCHHHHHHHHhcCCcceEEEcc------CCCCC-CC
Q 043626 40 ALELLALPDDGVPRLLLDIGCGS-GLSGETLSEN-GH-QWIGLDISQSMLNIALEREVEGDLLLGD------MGQGL-GL 109 (291)
Q Consensus 40 ~lelL~~~~~~~~~~VLDiGcGs-G~~~~~L~~~-g~-~v~gvDis~~ml~~a~~~~~~~~~~~~D------~~~~~-~~ 109 (291)
+++...+.+ +.+||-+|+|. |..+..+++. |. .|+++|.++..++.+++.... .++..+ ..+.+ ..
T Consensus 163 al~~~~~~~---g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~vi~~~~~~~~~~~~~i~~~ 238 (356)
T 1pl8_A 163 ACRRGGVTL---GHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD-LVLQISKESPQEIARKVEGQ 238 (356)
T ss_dssp HHHHHTCCT---TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS-EEEECSSCCHHHHHHHHHHH
T ss_pred HHHhcCCCC---CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC-EEEcCcccccchHHHHHHHH
Confidence 445556665 67999999875 6666666654 76 899999999999988765433 222211 00000 00
Q ss_pred CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 110 RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 110 ~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
....+|+|+-...- ...+....++|++||++++.
T Consensus 239 ~~~g~D~vid~~g~-----------------~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 239 LGCKPEVTIECTGA-----------------EASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp HTSCCSEEEECSCC-----------------HHHHHHHHHHSCTTCEEEEC
T ss_pred hCCCCCEEEECCCC-----------------hHHHHHHHHHhcCCCEEEEE
Confidence 01468999864321 13566788999999998864
No 320
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.72 E-value=0.047 Score=50.38 Aligned_cols=111 Identities=12% Similarity=0.050 Sum_probs=66.8
Q ss_pred HHHHhCCCCCCCCCeEEEEcCCC-chhHHHHHHc-CC-eEEEEeCCHHHHHHHHhcCCcceEEEccCCCCC-C-----C-
Q 043626 40 ALELLALPDDGVPRLLLDIGCGS-GLSGETLSEN-GH-QWIGLDISQSMLNIALEREVEGDLLLGDMGQGL-G-----L- 109 (291)
Q Consensus 40 ~lelL~~~~~~~~~~VLDiGcGs-G~~~~~L~~~-g~-~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~-~-----~- 109 (291)
+++...+.+ +.+||-+|||. |.++..+++. |. .|+++|.++..++.+++... +++..+- ..+ . .
T Consensus 177 al~~~~~~~---g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa--~~i~~~~-~~~~~~~~~~~~ 250 (398)
T 2dph_A 177 GCVSAGVKP---GSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGF--ETIDLRN-SAPLRDQIDQIL 250 (398)
T ss_dssp HHHHTTCCT---TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTC--EEEETTS-SSCHHHHHHHHH
T ss_pred HHHHcCCCC---CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC--cEEcCCC-cchHHHHHHHHh
Confidence 345555555 77999999976 7777777764 76 89999999999999876543 3332221 111 0 0
Q ss_pred CCCcccEEEECCchhhhcc-ccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 110 RPGVVDGAISISAVQWLCN-ADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 110 ~~~~fD~Vis~~~l~~l~~-~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
....||+||-...-..... ++. .+.+ ....+..+.++|++||++++.
T Consensus 251 ~g~g~Dvvid~~g~~~~~~~~~~-~~~~---~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 251 GKPEVDCGVDAVGFEAHGLGDEA-NTET---PNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp SSSCEEEEEECSCTTCBCSGGGT-TSBC---TTHHHHHHHHHEEEEEEEECC
T ss_pred CCCCCCEEEECCCCccccccccc-cccc---cHHHHHHHHHHHhcCCEEEEe
Confidence 1226999986533221000 000 0000 113577888999999998753
No 321
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.70 E-value=0.023 Score=51.87 Aligned_cols=98 Identities=17% Similarity=0.214 Sum_probs=64.1
Q ss_pred HHhCCCCCCCCCeEEEEcCCC-chhHHHHHHc-CC-eEEEEeCCHHHHHHHHhcCCcceEEEccCCC---CC-CCCCCcc
Q 043626 42 ELLALPDDGVPRLLLDIGCGS-GLSGETLSEN-GH-QWIGLDISQSMLNIALEREVEGDLLLGDMGQ---GL-GLRPGVV 114 (291)
Q Consensus 42 elL~~~~~~~~~~VLDiGcGs-G~~~~~L~~~-g~-~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~---~~-~~~~~~f 114 (291)
+...+.+ +.+||-+|||. |.....+++. |. .|+++|.++..++.+++.... .++..+-.+ .+ ....+.+
T Consensus 184 ~~~~~~~---g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~vi~~~~~~~~~~~~~~~~gg~ 259 (371)
T 1f8f_A 184 NALKVTP---ASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGAT-HVINSKTQDPVAAIKEITDGGV 259 (371)
T ss_dssp TTTCCCT---TCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCS-EEEETTTSCHHHHHHHHTTSCE
T ss_pred hccCCCC---CCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCC-EEecCCccCHHHHHHHhcCCCC
Confidence 4445554 67999999876 7777777664 76 799999999999998765432 222221101 00 1112369
Q ss_pred cEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 115 DGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 115 D~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
|+|+-.... ...+..+.++|+++|++++.
T Consensus 260 D~vid~~g~-----------------~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 260 NFALESTGS-----------------PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp EEEEECSCC-----------------HHHHHHHHHTEEEEEEEEEC
T ss_pred cEEEECCCC-----------------HHHHHHHHHHHhcCCEEEEe
Confidence 999854221 14567889999999998874
No 322
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=95.64 E-value=0.29 Score=50.66 Aligned_cols=132 Identities=14% Similarity=0.083 Sum_probs=86.9
Q ss_pred CCeEEEEcCCCchhHHHHHHcCC--eEEEEeCCHHHHHHHHhcCCcceEEEccCC------------CCC--CC-CCCcc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGH--QWIGLDISQSMLNIALEREVEGDLLLGDMG------------QGL--GL-RPGVV 114 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~--~v~gvDis~~ml~~a~~~~~~~~~~~~D~~------------~~~--~~-~~~~f 114 (291)
..++||+-||.|.++.-|...|. .+.++|+++.+++.-+.+++...++..|+. ... .+ ..+.+
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp~~~~v 619 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDV 619 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSBCTTCCBCCCTTTC
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCCCccccccHHHHhhhccchhhhhhhhhhcccCCCe
Confidence 46899999999999999998885 578999999999999999888777766641 111 11 24579
Q ss_pred cEEEECCchhhhccccccC----CchHHHHHHHHHHHHHhccCCcEEEEEEcC----CChHHHHHHHHHHHHcCCCC
Q 043626 115 DGAISISAVQWLCNADKAS----HEPRLRLKAFFGSLYRCLARGARAVFQIYP----ESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 115 D~Vis~~~l~~l~~~~~~~----~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~----~~~~~~~~i~~~~~~aGF~~ 183 (291)
|+|+....-|.+..+.+.. ..++..+-.-+-.+...++|--.++=.+.. .....+..+...|...||..
T Consensus 620 Dll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rPk~~llENV~glls~~~~~~~~~i~~~L~~lGY~v 696 (1002)
T 3swr_A 620 EMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQC 696 (1002)
T ss_dssp SEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCCSEEEEEEEGGGGTTGGGHHHHHHHHHHHHHTCEE
T ss_pred eEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCCCEEEEeccHHHhccCcchHHHHHHHHHHhcCCeE
Confidence 9999887766654432211 111111222233455667886544433321 22346778888899999975
No 323
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.47 E-value=0.034 Score=50.28 Aligned_cols=96 Identities=14% Similarity=0.070 Sum_probs=64.4
Q ss_pred HHHHHhCCCCCCCCCeEEEEcCCC-chhHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccE
Q 043626 39 RALELLALPDDGVPRLLLDIGCGS-GLSGETLSEN-GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDG 116 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiGcGs-G~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~ 116 (291)
.++....+.+ +.+||-+|+|. |.....+++. |.+|+++|.++..++.+++..... ++ .+. +.+ . ..+|+
T Consensus 167 ~~l~~~~~~~---g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-v~-~~~-~~~--~-~~~D~ 237 (348)
T 3two_A 167 SPLKFSKVTK---GTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKH-FY-TDP-KQC--K-EELDF 237 (348)
T ss_dssp HHHHHTTCCT---TCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSE-EE-SSG-GGC--C-SCEEE
T ss_pred HHHHhcCCCC---CCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCe-ec-CCH-HHH--h-cCCCE
Confidence 3445555555 77999999875 6666666654 789999999999999887754332 22 332 222 1 27999
Q ss_pred EEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 117 AISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 117 Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
|+-...-. ..+..+.++|+++|++++.
T Consensus 238 vid~~g~~-----------------~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 238 IISTIPTH-----------------YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp EEECCCSC-----------------CCHHHHHTTEEEEEEEEEC
T ss_pred EEECCCcH-----------------HHHHHHHHHHhcCCEEEEE
Confidence 98542211 2355778899999999875
No 324
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.44 E-value=0.018 Score=57.08 Aligned_cols=118 Identities=19% Similarity=0.248 Sum_probs=75.7
Q ss_pred CCeEEEEcCCCchhHHHHHHc------------C--CeEEEEeC---CHHHHHHHHhcCCc-------------------
Q 043626 52 PRLLLDIGCGSGLSGETLSEN------------G--HQWIGLDI---SQSMLNIALEREVE------------------- 95 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~------------g--~~v~gvDi---s~~ml~~a~~~~~~------------------- 95 (291)
..+|||+|-|+|.......+. . .++++++. +...+..+....++
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 469999999999976655432 2 56999998 88887755443211
Q ss_pred -----------ceEEEccCCCCCCCC----CCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 96 -----------GDLLLGDMGQGLGLR----PGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 96 -----------~~~~~~D~~~~~~~~----~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+++..+|+.+.++-- ...||+++....- ...+|..=-..+|..++++++|||.+.
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~--------p~~np~~w~~~~~~~l~~~~~~g~~~~-- 216 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFA--------PAKNPDMWTQNLFNAMARLARPGGTLA-- 216 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSC--------GGGCGGGSCHHHHHHHHHHEEEEEEEE--
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCC--------CcCChhhhhHHHHHHHHHHhCCCCEEE--
Confidence 245666664433321 3679998864211 111232212588999999999999765
Q ss_pred EcCCChHHHHHHHHHHHHcCCCC
Q 043626 161 IYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 161 ~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
+|... ..+...+.++||..
T Consensus 217 t~~~~----~~vr~~L~~aGf~v 235 (676)
T 3ps9_A 217 TFTSA----GFVRRGLQDAGFTM 235 (676)
T ss_dssp ESCCC----HHHHHHHHHHTCEE
T ss_pred eccCc----HHHHHHHHhCCeEE
Confidence 33333 35677788999964
No 325
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.43 E-value=0.091 Score=50.08 Aligned_cols=131 Identities=9% Similarity=-0.039 Sum_probs=82.3
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-CeEEEEeCCHHHHHHHHhcC---CcceEEEccCCCCCCC----------------CC
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSMLNIALERE---VEGDLLLGDMGQGLGL----------------RP 111 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-~~v~gvDis~~ml~~a~~~~---~~~~~~~~D~~~~~~~----------------~~ 111 (291)
..+++|+-||.|.+..-+...| ..+.++|+++...+.-+.++ +...++.+|+.+..+. ..
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~~~ 167 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQHI 167 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHHHS
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhhhcC
Confidence 4689999999999999999888 45899999999999888887 4567788887432110 12
Q ss_pred CcccEEEECCchhhhcccccc---------C--CchHHHHHHHHHHHHHhccCCcEEEEE-EcC----CChHHHHHHHHH
Q 043626 112 GVVDGAISISAVQWLCNADKA---------S--HEPRLRLKAFFGSLYRCLARGARAVFQ-IYP----ESVAQRELILGA 175 (291)
Q Consensus 112 ~~fD~Vis~~~l~~l~~~~~~---------~--~~p~~~l~~~l~~l~~~LkpgG~lv~~-~~~----~~~~~~~~i~~~ 175 (291)
..+|+++..+.-|-+..+-.. . .++...+-.-+-.+...++|. .+++. +-. ........|...
T Consensus 168 ~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~rPk-~fvlENV~gl~s~~~g~~f~~i~~~ 246 (482)
T 3me5_A 168 PEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPA-MFVLENVKNLKSHDKGKTFRIIMQT 246 (482)
T ss_dssp CCCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHCCS-EEEEEEETTTTTGGGGHHHHHHHHH
T ss_pred CCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcCCc-EEEEeCcHHHhcccCCcHHHHHHHH
Confidence 468999987665544322110 0 122222322233344556785 34443 321 223467788899
Q ss_pred HHHcCCCC
Q 043626 176 AMRAGFAG 183 (291)
Q Consensus 176 ~~~aGF~~ 183 (291)
|...||..
T Consensus 247 L~~lGY~v 254 (482)
T 3me5_A 247 LDELGYDV 254 (482)
T ss_dssp HHHTTEEE
T ss_pred HhcCCcEE
Confidence 99999853
No 326
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.42 E-value=0.071 Score=48.20 Aligned_cols=101 Identities=17% Similarity=0.112 Sum_probs=64.4
Q ss_pred HHHHHhCCCCCCCCCeEEEEcCCC-chhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC------CC
Q 043626 39 RALELLALPDDGVPRLLLDIGCGS-GLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLG------LR 110 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiGcGs-G~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~------~~ 110 (291)
.+++...+.+ +.+||-+|+|. |..+..++. .|..|+++|.++..++.+++.... .++..+-...+. ..
T Consensus 159 ~al~~~~~~~---g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~~~~~~~~~~~~~~i~~~~~ 234 (352)
T 1e3j_A 159 HACRRAGVQL---GTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGAD-VTLVVDPAKEEESSIIERIR 234 (352)
T ss_dssp HHHHHHTCCT---TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS-EEEECCTTTSCHHHHHHHHH
T ss_pred HHHHhcCCCC---CCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCC-EEEcCcccccHHHHHHHHhc
Confidence 3445556665 67999999864 566666665 477899999999999988765433 222211001110 00
Q ss_pred ---CCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 111 ---PGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 111 ---~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
...+|+|+..... ...+..+.++|+++|++++.
T Consensus 235 ~~~g~g~D~vid~~g~-----------------~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 235 SAIGDLPNVTIDCSGN-----------------EKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp HHSSSCCSEEEECSCC-----------------HHHHHHHHHHSCTTCEEEEC
T ss_pred cccCCCCCEEEECCCC-----------------HHHHHHHHHHHhcCCEEEEE
Confidence 2468999864321 13566788999999998864
No 327
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.34 E-value=0.12 Score=47.26 Aligned_cols=100 Identities=22% Similarity=0.215 Sum_probs=65.7
Q ss_pred HHHHhCCCCCCCCCeEEEEcCCC-chhHHHHHHc-CC-eEEEEeCCHHHHHHHHhcCCcceEEEccCCC---C----CCC
Q 043626 40 ALELLALPDDGVPRLLLDIGCGS-GLSGETLSEN-GH-QWIGLDISQSMLNIALEREVEGDLLLGDMGQ---G----LGL 109 (291)
Q Consensus 40 ~lelL~~~~~~~~~~VLDiGcGs-G~~~~~L~~~-g~-~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~---~----~~~ 109 (291)
+++...+.+ +.+||-+|+|. |.++..+++. |. .|+++|.++..++.+++.... .++...-.+ . ...
T Consensus 174 ~l~~~~~~~---g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~vi~~~~~~~~~~i~~~~~~ 249 (370)
T 4ej6_A 174 GVDLSGIKA---GSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGAT-ATVDPSAGDVVEAIAGPVGL 249 (370)
T ss_dssp HHHHHTCCT---TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS-EEECTTSSCHHHHHHSTTSS
T ss_pred HHHhcCCCC---CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC-EEECCCCcCHHHHHHhhhhc
Confidence 446666665 77999999865 6666666654 76 899999999999988875432 122111000 0 012
Q ss_pred CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 110 RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 110 ~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
..+.+|+|+-...- ...+..+.++|++||++++.
T Consensus 250 ~~gg~Dvvid~~G~-----------------~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 250 VPGGVDVVIECAGV-----------------AETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp STTCEEEEEECSCC-----------------HHHHHHHHHHEEEEEEEEEC
T ss_pred cCCCCCEEEECCCC-----------------HHHHHHHHHHhccCCEEEEE
Confidence 23579999964221 24577889999999999874
No 328
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.28 E-value=0.1 Score=47.24 Aligned_cols=102 Identities=16% Similarity=0.082 Sum_probs=65.4
Q ss_pred HHHHHhCCCCCCCCCeEEEEcCCC-chhHHHHHHc-CCe-EEEEeCCHHHHHHHHhcCCcceEEEcc------CCCCC--
Q 043626 39 RALELLALPDDGVPRLLLDIGCGS-GLSGETLSEN-GHQ-WIGLDISQSMLNIALEREVEGDLLLGD------MGQGL-- 107 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiGcGs-G~~~~~L~~~-g~~-v~gvDis~~ml~~a~~~~~~~~~~~~D------~~~~~-- 107 (291)
.+++...+.+ +.+||-+|+|. |..+..+++. |.. |+++|.++.-++.+++....+-....+ +.+.+
T Consensus 170 ~~l~~~~~~~---g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~ 246 (363)
T 3m6i_A 170 AGLQRAGVRL---GDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVE 246 (363)
T ss_dssp HHHHHHTCCT---TCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHH
T ss_pred HHHHHcCCCC---CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHH
Confidence 3445566665 67899999865 6666666654 665 999999999999998762222112111 10000
Q ss_pred CCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 108 GLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 108 ~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
......+|+|+-...- ...+..+.++|++||++++.
T Consensus 247 ~t~g~g~Dvvid~~g~-----------------~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 247 SFGGIEPAVALECTGV-----------------ESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp HTSSCCCSEEEECSCC-----------------HHHHHHHHHHSCTTCEEEEC
T ss_pred HhCCCCCCEEEECCCC-----------------hHHHHHHHHHhcCCCEEEEE
Confidence 0113479999864221 13567788999999999874
No 329
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.16 E-value=0.012 Score=52.47 Aligned_cols=88 Identities=19% Similarity=0.177 Sum_probs=52.6
Q ss_pred ceEEEccCCCCCC-CCCCcccEEEECCchhhhccc-cccC-------Cc-hHHHHHHHHHHHHHhccCCcEEEEEEcCCC
Q 043626 96 GDLLLGDMGQGLG-LRPGVVDGAISISAVQWLCNA-DKAS-------HE-PRLRLKAFFGSLYRCLARGARAVFQIYPES 165 (291)
Q Consensus 96 ~~~~~~D~~~~~~-~~~~~fD~Vis~~~l~~l~~~-~~~~-------~~-p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~ 165 (291)
+.++++|..+.+. +++++||+||++.......+- .... +. -...+..++..++++|+|||.+++.+....
T Consensus 22 ~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~~ 101 (297)
T 2zig_A 22 HRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDVA 101 (297)
T ss_dssp EEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEE
T ss_pred CEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCCc
Confidence 5688888755332 456899999998554321110 0000 00 011245678899999999999998764210
Q ss_pred -----------hHHHHHHHHHHHHcCCCC
Q 043626 166 -----------VAQRELILGAAMRAGFAG 183 (291)
Q Consensus 166 -----------~~~~~~i~~~~~~aGF~~ 183 (291)
......+...+..+||..
T Consensus 102 ~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~ 130 (297)
T 2zig_A 102 VARRRFGRHLVFPLHADIQVRCRKLGFDN 130 (297)
T ss_dssp EECC----EEEECHHHHHHHHHHHTTCEE
T ss_pred cccccCCcccccccHHHHHHHHHHcCCee
Confidence 012245677788899864
No 330
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.93 E-value=0.12 Score=47.46 Aligned_cols=114 Identities=14% Similarity=0.109 Sum_probs=66.2
Q ss_pred HHHHhCCCCCCCCCeEEEEcCCC-chhHHHHHHc-CC-eEEEEeCCHHHHHHHHhcCCcceEEEccCCCCC-----C-CC
Q 043626 40 ALELLALPDDGVPRLLLDIGCGS-GLSGETLSEN-GH-QWIGLDISQSMLNIALEREVEGDLLLGDMGQGL-----G-LR 110 (291)
Q Consensus 40 ~lelL~~~~~~~~~~VLDiGcGs-G~~~~~L~~~-g~-~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~-----~-~~ 110 (291)
++....+.+ +.+||-+|||. |.++..+++. |. .|+++|.++..++.+++... +.+...-...+ . ..
T Consensus 177 al~~~~~~~---g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa--~~i~~~~~~~~~~~v~~~t~ 251 (398)
T 1kol_A 177 GAVTAGVGP---GSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF--EIADLSLDTPLHEQIAALLG 251 (398)
T ss_dssp HHHHTTCCT---TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC--EEEETTSSSCHHHHHHHHHS
T ss_pred HHHHcCCCC---CCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCC--cEEccCCcchHHHHHHHHhC
Confidence 334445554 67999999876 7777777764 65 79999999999999977543 33322110100 0 01
Q ss_pred CCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 111 PGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 111 ~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
...+|+|+-...-..........+++. ....+..+.++|++||++++.
T Consensus 252 g~g~Dvvid~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 252 EPEVDCAVDAVGFEARGHGHEGAKHEA--PATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp SSCEEEEEECCCTTCBCSSTTGGGSBC--TTHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEECCCCcccccccccccccc--hHHHHHHHHHHHhcCCEEEEe
Confidence 236999996543211000000000000 124677888999999998764
No 331
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.85 E-value=0.024 Score=51.13 Aligned_cols=88 Identities=13% Similarity=0.109 Sum_probs=54.5
Q ss_pred ceEEEccCCCCCC-CCCCcccEEEECCchhhhcc---ccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC--C----
Q 043626 96 GDLLLGDMGQGLG-LRPGVVDGAISISAVQWLCN---ADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE--S---- 165 (291)
Q Consensus 96 ~~~~~~D~~~~~~-~~~~~fD~Vis~~~l~~l~~---~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~--~---- 165 (291)
+.++++|..+.+. ++.++||+|++........+ .+....+-...+..+|..++++|+|||.+++.+... .
T Consensus 15 ~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~ 94 (323)
T 1boo_A 15 GSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPA 94 (323)
T ss_dssp EEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEEE
T ss_pred ceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCcc
Confidence 5677888644333 45789999998754421100 000000111225778889999999999999976532 1
Q ss_pred --hHHHHHHHHHHHHcCCCC
Q 043626 166 --VAQRELILGAAMRAGFAG 183 (291)
Q Consensus 166 --~~~~~~i~~~~~~aGF~~ 183 (291)
......+...+...||.-
T Consensus 95 ~~~~~~~~i~~~~~~~Gf~~ 114 (323)
T 1boo_A 95 RSIYNFRVLIRMIDEVGFFL 114 (323)
T ss_dssp ECCHHHHHHHHHHHTTCCEE
T ss_pred cccchHHHHHHHHHhCCCEE
Confidence 234566777788899863
No 332
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.78 E-value=0.083 Score=47.73 Aligned_cols=101 Identities=18% Similarity=0.173 Sum_probs=65.4
Q ss_pred HHHHHhCCCCCCCCCeEEEEcCCC-chhHHHHHHc-CC-eEEEEeCCHHHHHHHHhcCCcceEEEccCCC---CC-C-CC
Q 043626 39 RALELLALPDDGVPRLLLDIGCGS-GLSGETLSEN-GH-QWIGLDISQSMLNIALEREVEGDLLLGDMGQ---GL-G-LR 110 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiGcGs-G~~~~~L~~~-g~-~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~---~~-~-~~ 110 (291)
.+++...+.+ +.+||-+|+|. |..+..+++. |. .|+++|.++..++.+++.... .++..+-.. .+ . ..
T Consensus 157 ~al~~~~~~~---g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~-~vi~~~~~~~~~~v~~~t~ 232 (352)
T 3fpc_A 157 HGAELANIKL---GDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGAT-DIINYKNGDIVEQILKATD 232 (352)
T ss_dssp HHHHHTTCCT---TCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCC-EEECGGGSCHHHHHHHHTT
T ss_pred HHHHhcCCCC---CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCc-eEEcCCCcCHHHHHHHHcC
Confidence 3456666665 67899999875 6666777765 65 899999999999988876432 122111100 00 0 11
Q ss_pred CCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 111 PGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 111 ~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
...+|+|+-...- ...+..+.++|++||++++.
T Consensus 233 g~g~D~v~d~~g~-----------------~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 233 GKGVDKVVIAGGD-----------------VHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp TCCEEEEEECSSC-----------------TTHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEECCCC-----------------hHHHHHHHHHHhcCCEEEEe
Confidence 2369999854221 13567788999999998864
No 333
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=94.65 E-value=0.24 Score=49.85 Aligned_cols=52 Identities=13% Similarity=0.070 Sum_probs=42.9
Q ss_pred CCeEEEEcCCCchhHHHHHHcC-------CeEEEEeCCHHHHHHHHhcCCcceEEEccC
Q 043626 52 PRLLLDIGCGSGLSGETLSENG-------HQWIGLDISQSMLNIALEREVEGDLLLGDM 103 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g-------~~v~gvDis~~ml~~a~~~~~~~~~~~~D~ 103 (291)
..+|||+-||.|.++.-|...| ..+.++|+++.+++.-+.|+++..+++.|+
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp~~~~~~~di 270 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQTEVRNEKA 270 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCTTSEEEESCH
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCCCCceecCcH
Confidence 4689999999999988887665 467899999999999999987766666554
No 334
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=94.59 E-value=0.043 Score=47.93 Aligned_cols=93 Identities=16% Similarity=0.234 Sum_probs=57.8
Q ss_pred CCCCCCCcccEEEECCc----hhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCC
Q 043626 106 GLGLRPGVVDGAISISA----VQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGF 181 (291)
Q Consensus 106 ~~~~~~~~fD~Vis~~~----l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF 181 (291)
++|-.-+.||+|+++.- .||... ..+=...+..+-.....+|+|||.+++.-|+.-+...+.+..++.+. |
T Consensus 204 G~P~~~grYDlVfvNv~TpyR~HHYQQ----CeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARk-F 278 (324)
T 3trk_A 204 GLPATLGRYDLVVINIHTPFRIHHYQQ----CVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRK-F 278 (324)
T ss_dssp CCCGGGCCEEEEEEECCCCCCSSHHHH----HHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTT-E
T ss_pred CCCCcCCceeEEEEecCCccccchHHH----HHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhh-h
Confidence 45544589999998732 333211 00111224555667788999999999999998877778777776665 7
Q ss_pred CCcEEEeCCCCCCCCcEEEEEe
Q 043626 182 AGGVVVDYPHSSKSRKEFLVLT 203 (291)
Q Consensus 182 ~~~~~~~~p~~~~~~~~~l~l~ 203 (291)
.-..+..-.....+...+++++
T Consensus 279 ~~~rv~~P~cv~snTEv~~vF~ 300 (324)
T 3trk_A 279 RSSRALKPPCVTSNTEMFFLFS 300 (324)
T ss_dssp EEEEEECCTTCCBTTCEEEEEE
T ss_pred eeeeeecCccccccceEEEEEE
Confidence 6533333333444555555443
No 335
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.53 E-value=0.099 Score=42.90 Aligned_cols=93 Identities=16% Similarity=0.052 Sum_probs=58.0
Q ss_pred hCCCCCCCCCeEEEEcCCC--chhHHHHH-HcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC-C-----C-CCCCc
Q 043626 44 LALPDDGVPRLLLDIGCGS--GLSGETLS-ENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG-L-----G-LRPGV 113 (291)
Q Consensus 44 L~~~~~~~~~~VLDiGcGs--G~~~~~L~-~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~-~-----~-~~~~~ 113 (291)
..+.+ +.+||.+|++. |.....++ ..|.+|+++|.++..++.+++... +.+ .|.... . . .....
T Consensus 34 ~~~~~---g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~--~~~-~d~~~~~~~~~~~~~~~~~~ 107 (198)
T 1pqw_A 34 GRLSP---GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV--EYV-GDSRSVDFADEILELTDGYG 107 (198)
T ss_dssp SCCCT---TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCC--SEE-EETTCSTHHHHHHHHTTTCC
T ss_pred hCCCC---CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC--CEE-eeCCcHHHHHHHHHHhCCCC
Confidence 34444 67999999533 44443333 458899999999998887765322 222 233221 0 0 11236
Q ss_pred ccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 114 VDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 114 fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+|+||.+... ..+..+.++|++||++++.
T Consensus 108 ~D~vi~~~g~------------------~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 108 VDVVLNSLAG------------------EAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp EEEEEECCCT------------------HHHHHHHHTEEEEEEEEEC
T ss_pred CeEEEECCch------------------HHHHHHHHHhccCCEEEEE
Confidence 9999865321 3466788999999998864
No 336
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.52 E-value=0.11 Score=47.48 Aligned_cols=98 Identities=18% Similarity=0.260 Sum_probs=62.8
Q ss_pred HHhCCCCCCCCCeEEEEcCCC-chhHHHHHHc-CC-eEEEEeCCHHHHHHHHhcCCcceEEEcc-CCCCC-----CCCCC
Q 043626 42 ELLALPDDGVPRLLLDIGCGS-GLSGETLSEN-GH-QWIGLDISQSMLNIALEREVEGDLLLGD-MGQGL-----GLRPG 112 (291)
Q Consensus 42 elL~~~~~~~~~~VLDiGcGs-G~~~~~L~~~-g~-~v~gvDis~~ml~~a~~~~~~~~~~~~D-~~~~~-----~~~~~ 112 (291)
+...+.+ +.+||-+|+|. |..+..+++. |. .|+++|.++..++.+++.... .++... ....+ ....+
T Consensus 187 ~~~~~~~---g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~vi~~~~~~~~~~~~i~~~~~g 262 (378)
T 3uko_A 187 NTAKVEP---GSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVN-EFVNPKDHDKPIQEVIVDLTDG 262 (378)
T ss_dssp TTTCCCT---TCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCC-EEECGGGCSSCHHHHHHHHTTS
T ss_pred hhcCCCC---CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc-EEEccccCchhHHHHHHHhcCC
Confidence 4444554 67899999864 6666666654 76 899999999999988765432 122111 00111 11234
Q ss_pred cccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCC-cEEEEE
Q 043626 113 VVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARG-ARAVFQ 160 (291)
Q Consensus 113 ~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~Lkpg-G~lv~~ 160 (291)
.+|+|+-...- ...+..+.++|++| |++++.
T Consensus 263 g~D~vid~~g~-----------------~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 263 GVDYSFECIGN-----------------VSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp CBSEEEECSCC-----------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCEEEECCCC-----------------HHHHHHHHHHhhccCCEEEEE
Confidence 79999964221 24577889999997 998874
No 337
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.50 E-value=0.47 Score=36.68 Aligned_cols=109 Identities=14% Similarity=0.026 Sum_probs=66.7
Q ss_pred CCeEEEEcCCC-ch-hHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC---CCCCcccEEEECCchhhh
Q 043626 52 PRLLLDIGCGS-GL-SGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLG---LRPGVVDGAISISAVQWL 126 (291)
Q Consensus 52 ~~~VLDiGcGs-G~-~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~---~~~~~fD~Vis~~~l~~l 126 (291)
..+|+=+|||. |. +...|.+.|+.|+++|.++..++.+.+. ...++.+|....-. .....+|+||+...-.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~--g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~-- 82 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRER--GVRAVLGNAANEEIMQLAHLECAKWLILTIPNG-- 82 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT--TCEEEESCTTSHHHHHHTTGGGCSEEEECCSCH--
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc--CCCEEECCCCCHHHHHhcCcccCCEEEEECCCh--
Confidence 35799999875 33 3445556789999999999998887763 45678888744211 1234788888642211
Q ss_pred ccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCC
Q 043626 127 CNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFA 182 (291)
Q Consensus 127 ~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~ 182 (291)
. ....+....+.+.|+..++.... +.... ..+.+.|..
T Consensus 83 ----------~--~n~~~~~~a~~~~~~~~iiar~~--~~~~~----~~l~~~G~d 120 (140)
T 3fwz_A 83 ----------Y--EAGEIVASARAKNPDIEIIARAH--YDDEV----AYITERGAN 120 (140)
T ss_dssp ----------H--HHHHHHHHHHHHCSSSEEEEEES--SHHHH----HHHHHTTCS
T ss_pred ----------H--HHHHHHHHHHHHCCCCeEEEEEC--CHHHH----HHHHHCCCC
Confidence 0 11223345666788888777652 22333 345566654
No 338
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.44 E-value=0.05 Score=49.78 Aligned_cols=99 Identities=13% Similarity=0.126 Sum_probs=61.9
Q ss_pred HHHHhCCCCCCCCCeEEEEcCCC-chhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCC-CCCCCcccE
Q 043626 40 ALELLALPDDGVPRLLLDIGCGS-GLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGL-GLRPGVVDG 116 (291)
Q Consensus 40 ~lelL~~~~~~~~~~VLDiGcGs-G~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~-~~~~~~fD~ 116 (291)
++..+.+.+ +.+||-+|+|. |.....+++ .|..|+++|.++..++.+++.... .++...-.+.. .. .+.+|+
T Consensus 186 al~~~~~~~---g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~-~vi~~~~~~~~~~~-~~g~Dv 260 (369)
T 1uuf_A 186 PLRHWQAGP---GKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGAD-EVVNSRNADEMAAH-LKSFDF 260 (369)
T ss_dssp HHHHTTCCT---TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCS-EEEETTCHHHHHTT-TTCEEE
T ss_pred HHHhcCCCC---CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc-EEeccccHHHHHHh-hcCCCE
Confidence 344445554 67999999875 666666665 478899999999988888764322 22221100000 11 157999
Q ss_pred EEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 117 AISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 117 Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
|+....-. ..+..+.++|+++|++++.
T Consensus 261 vid~~g~~-----------------~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 261 ILNTVAAP-----------------HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp EEECCSSC-----------------CCHHHHHTTEEEEEEEEEC
T ss_pred EEECCCCH-----------------HHHHHHHHHhccCCEEEEe
Confidence 98643211 1345678899999998864
No 339
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.16 E-value=0.29 Score=44.39 Aligned_cols=95 Identities=17% Similarity=0.095 Sum_probs=61.5
Q ss_pred HhCCCCCCCCCeEEEEcCCC-chhHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC------CCCCcc
Q 043626 43 LLALPDDGVPRLLLDIGCGS-GLSGETLSEN-GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLG------LRPGVV 114 (291)
Q Consensus 43 lL~~~~~~~~~~VLDiGcGs-G~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~------~~~~~f 114 (291)
...+.+ +.+||-+|+|. |..+..+++. |..|+++|.++..++.+++.... .++..+- ..+. .....+
T Consensus 184 ~~~~~~---g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~vi~~~~-~~~~~~v~~~~~g~g~ 258 (363)
T 3uog_A 184 KGHLRA---GDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGAD-HGINRLE-EDWVERVYALTGDRGA 258 (363)
T ss_dssp TTCCCT---TCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS-EEEETTT-SCHHHHHHHHHTTCCE
T ss_pred hcCCCC---CCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCC-EEEcCCc-ccHHHHHHHHhCCCCc
Confidence 344444 77999999775 6666666654 78999999999999988775432 2222211 1110 112369
Q ss_pred cEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 115 DGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 115 D~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
|+|+-...- ..+..+.++|+++|++++.
T Consensus 259 D~vid~~g~------------------~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 259 DHILEIAGG------------------AGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp EEEEEETTS------------------SCHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCCh------------------HHHHHHHHHhhcCCEEEEE
Confidence 999864321 2355678899999999874
No 340
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.12 E-value=0.17 Score=46.11 Aligned_cols=98 Identities=16% Similarity=0.137 Sum_probs=62.2
Q ss_pred HHhCCCCCCCCCeEEEEcCCC-chhHHHHHHc-CC-eEEEEeCCHHHHHHHHhcCCcceEEEcc-CCCCC-----CCCCC
Q 043626 42 ELLALPDDGVPRLLLDIGCGS-GLSGETLSEN-GH-QWIGLDISQSMLNIALEREVEGDLLLGD-MGQGL-----GLRPG 112 (291)
Q Consensus 42 elL~~~~~~~~~~VLDiGcGs-G~~~~~L~~~-g~-~v~gvDis~~ml~~a~~~~~~~~~~~~D-~~~~~-----~~~~~ 112 (291)
+...+.+ +.+||-+|+|. |.....+++. |. .|+++|.++..++.+++.... .++..+ ....+ ....+
T Consensus 185 ~~~~~~~---g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~vi~~~~~~~~~~~~i~~~t~g 260 (373)
T 1p0f_A 185 NTAKVTP---GSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGAT-ECLNPKDYDKPIYEVICEKTNG 260 (373)
T ss_dssp TTTCCCT---TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCS-EEECGGGCSSCHHHHHHHHTTS
T ss_pred hccCCCC---CCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCc-EEEecccccchHHHHHHHHhCC
Confidence 3444544 67999999865 6666666654 76 899999999999888765432 222211 00111 01124
Q ss_pred cccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCC-cEEEEE
Q 043626 113 VVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARG-ARAVFQ 160 (291)
Q Consensus 113 ~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~Lkpg-G~lv~~ 160 (291)
.+|+|+-...- ...+..+.++|+++ |++++.
T Consensus 261 g~Dvvid~~g~-----------------~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 261 GVDYAVECAGR-----------------IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp CBSEEEECSCC-----------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCEEEECCCC-----------------HHHHHHHHHHHhcCCCEEEEE
Confidence 79999854221 14567788999999 998864
No 341
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.07 E-value=0.16 Score=45.49 Aligned_cols=97 Identities=12% Similarity=0.071 Sum_probs=61.2
Q ss_pred HHhCCCCCCCCCeEEEEcCC--CchhHHHHHH-cCCeEEEEeCCHHHHHHH-HhcCCcceEEEccCCCC---C-CCCCCc
Q 043626 42 ELLALPDDGVPRLLLDIGCG--SGLSGETLSE-NGHQWIGLDISQSMLNIA-LEREVEGDLLLGDMGQG---L-GLRPGV 113 (291)
Q Consensus 42 elL~~~~~~~~~~VLDiGcG--sG~~~~~L~~-~g~~v~gvDis~~ml~~a-~~~~~~~~~~~~D~~~~---~-~~~~~~ 113 (291)
+...+.+ +.+||-+||+ .|.....++. .|.+|+++|.++.-++.+ ++.... .++...-.+. + ....+.
T Consensus 143 ~~~~~~~---g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~ 218 (336)
T 4b7c_A 143 DVGQPKN---GETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFD-GAIDYKNEDLAAGLKRECPKG 218 (336)
T ss_dssp HTTCCCT---TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCS-EEEETTTSCHHHHHHHHCTTC
T ss_pred HhcCCCC---CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCC-EEEECCCHHHHHHHHHhcCCC
Confidence 5556655 7799999983 3555555554 578999999999998888 443221 2222111010 0 011346
Q ss_pred ccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 114 VDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 114 fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+|+|+.+..- ..+..+.++|+++|++++.
T Consensus 219 ~d~vi~~~g~------------------~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 219 IDVFFDNVGG------------------EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp EEEEEESSCH------------------HHHHHHHTTEEEEEEEEEC
T ss_pred ceEEEECCCc------------------chHHHHHHHHhhCCEEEEE
Confidence 9999865321 3566788999999998864
No 342
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.03 E-value=0.33 Score=43.52 Aligned_cols=97 Identities=24% Similarity=0.299 Sum_probs=62.3
Q ss_pred HHHHhCCCCCCCCCeEEEEcCCC-chhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCC------C
Q 043626 40 ALELLALPDDGVPRLLLDIGCGS-GLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLR------P 111 (291)
Q Consensus 40 ~lelL~~~~~~~~~~VLDiGcGs-G~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~------~ 111 (291)
++....+.+ +.+||-+|+|. |.....++. .|.+|+++|.++..++.+++... +.+ .|..+. .+. .
T Consensus 156 ~l~~~~~~~---g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa--~~~-~d~~~~-~~~~~~~~~~ 228 (339)
T 1rjw_A 156 ALKVTGAKP---GEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGA--DLV-VNPLKE-DAAKFMKEKV 228 (339)
T ss_dssp HHHHHTCCT---TCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC--SEE-ECTTTS-CHHHHHHHHH
T ss_pred HHHhcCCCC---CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCC--CEE-ecCCCc-cHHHHHHHHh
Confidence 344445555 67999999963 555555554 47899999999999998876432 222 233211 100 0
Q ss_pred CcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 112 GVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 112 ~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+.+|+||..... ...+..+.++|+++|++++.
T Consensus 229 ~~~d~vid~~g~-----------------~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 229 GGVHAAVVTAVS-----------------KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp SSEEEEEESSCC-----------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECCCC-----------------HHHHHHHHHHhhcCCEEEEe
Confidence 468998865321 13567788999999998864
No 343
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.95 E-value=0.15 Score=46.48 Aligned_cols=91 Identities=15% Similarity=0.189 Sum_probs=58.4
Q ss_pred CCeEEEEcCCC-chhHHHHHHc-CC-eEEEEeCCHHHHHHHHhcCCcceEEEcc-CCCCC-----CCCCCcccEEEECCc
Q 043626 52 PRLLLDIGCGS-GLSGETLSEN-GH-QWIGLDISQSMLNIALEREVEGDLLLGD-MGQGL-----GLRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGs-G~~~~~L~~~-g~-~v~gvDis~~ml~~a~~~~~~~~~~~~D-~~~~~-----~~~~~~fD~Vis~~~ 122 (291)
+.+||-+|+|. |..+..+++. |. .|+++|.++..++.+++.... .++... ..+.+ ....+.+|+||-...
T Consensus 193 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~-~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 193 GSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT-DFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCC-EEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCc-eEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 67999999864 6666666654 76 899999999999888764332 222111 00111 011246899986422
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHHhccCC-cEEEEE
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYRCLARG-ARAVFQ 160 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~~Lkpg-G~lv~~ 160 (291)
. ...+..+.++|+++ |++++.
T Consensus 272 ~-----------------~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 272 N-----------------VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp C-----------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred C-----------------HHHHHHHHHHhhcCCcEEEEE
Confidence 1 14567788999999 998864
No 344
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.94 E-value=0.18 Score=45.83 Aligned_cols=98 Identities=17% Similarity=0.188 Sum_probs=61.4
Q ss_pred HHhCCCCCCCCCeEEEEcCCC-chhHHHHHHc-CC-eEEEEeCCHHHHHHHHhcCCcceEEEcc-CCCCC-----CCCCC
Q 043626 42 ELLALPDDGVPRLLLDIGCGS-GLSGETLSEN-GH-QWIGLDISQSMLNIALEREVEGDLLLGD-MGQGL-----GLRPG 112 (291)
Q Consensus 42 elL~~~~~~~~~~VLDiGcGs-G~~~~~L~~~-g~-~v~gvDis~~ml~~a~~~~~~~~~~~~D-~~~~~-----~~~~~ 112 (291)
+...+.+ +.+||-+|+|. |..+..+++. |. .|+++|.++..++.+++.... .++... ....+ ....+
T Consensus 184 ~~~~~~~---g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~-~vi~~~~~~~~~~~~v~~~~~~ 259 (373)
T 2fzw_A 184 NTAKLEP---GSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT-ECINPQDFSKPIQEVLIEMTDG 259 (373)
T ss_dssp TTTCCCT---TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCS-EEECGGGCSSCHHHHHHHHTTS
T ss_pred hhcCCCC---CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc-eEeccccccccHHHHHHHHhCC
Confidence 3344444 67999999864 5556666654 76 899999999988888765432 122111 00101 01124
Q ss_pred cccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCC-cEEEEE
Q 043626 113 VVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARG-ARAVFQ 160 (291)
Q Consensus 113 ~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~Lkpg-G~lv~~ 160 (291)
.+|+|+-...- ...+..+.++|+++ |++++.
T Consensus 260 g~D~vid~~g~-----------------~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 260 GVDYSFECIGN-----------------VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp CBSEEEECSCC-----------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCEEEECCCc-----------------HHHHHHHHHhhccCCcEEEEE
Confidence 79999864221 14567788999999 998864
No 345
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.91 E-value=0.2 Score=45.53 Aligned_cols=97 Identities=18% Similarity=0.194 Sum_probs=60.9
Q ss_pred HhCCCCCCCCCeEEEEcCCC-chhHHHHHHc-CC-eEEEEeCCHHHHHHHHhcCCcceEEEcc-CCCCC-----CCCCCc
Q 043626 43 LLALPDDGVPRLLLDIGCGS-GLSGETLSEN-GH-QWIGLDISQSMLNIALEREVEGDLLLGD-MGQGL-----GLRPGV 113 (291)
Q Consensus 43 lL~~~~~~~~~~VLDiGcGs-G~~~~~L~~~-g~-~v~gvDis~~ml~~a~~~~~~~~~~~~D-~~~~~-----~~~~~~ 113 (291)
...+.+ +.+||-+|+|. |.....+++. |. .|+++|.++..++.+++.... .++..+ ....+ ....+.
T Consensus 186 ~~~~~~---g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~-~vi~~~~~~~~~~~~~~~~~~~g 261 (374)
T 2jhf_A 186 VAKVTQ---GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT-ECVNPQDYKKPIQEVLTEMSNGG 261 (374)
T ss_dssp TTCCCT---TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS-EEECGGGCSSCHHHHHHHHTTSC
T ss_pred ccCCCC---CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc-eEecccccchhHHHHHHHHhCCC
Confidence 344444 67999999865 5666666654 76 899999999988888764332 222111 00101 011247
Q ss_pred ccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCC-cEEEEE
Q 043626 114 VDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARG-ARAVFQ 160 (291)
Q Consensus 114 fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~Lkpg-G~lv~~ 160 (291)
+|+|+-...- ...+..+.++|+++ |++++.
T Consensus 262 ~D~vid~~g~-----------------~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 262 VDFSFEVIGR-----------------LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp BSEEEECSCC-----------------HHHHHHHHHHBCTTTCEEEEC
T ss_pred CcEEEECCCC-----------------HHHHHHHHHHhhcCCcEEEEe
Confidence 9999854221 14567788999999 998864
No 346
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.90 E-value=0.13 Score=45.87 Aligned_cols=95 Identities=12% Similarity=0.071 Sum_probs=59.7
Q ss_pred HHhCCCCCCCCCeEEEEcCC--CchhHHHHH-HcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCC--CC-----CCCC
Q 043626 42 ELLALPDDGVPRLLLDIGCG--SGLSGETLS-ENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQ--GL-----GLRP 111 (291)
Q Consensus 42 elL~~~~~~~~~~VLDiGcG--sG~~~~~L~-~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~--~~-----~~~~ 111 (291)
+...+.. +..||-.||+ .|.....++ ..|.+|+++|.++..++.+++... +.+ .|..+ .+ ....
T Consensus 139 ~~~~~~~---g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~--~~~-~d~~~~~~~~~~~~~~~~ 212 (333)
T 1v3u_A 139 EVCGVKG---GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGF--DAA-FNYKTVNSLEEALKKASP 212 (333)
T ss_dssp TTSCCCS---SCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC--SEE-EETTSCSCHHHHHHHHCT
T ss_pred HhhCCCC---CCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC--cEE-EecCCHHHHHHHHHHHhC
Confidence 3344444 6799999983 344444444 458899999999998888854322 221 23322 10 0112
Q ss_pred CcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 112 GVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 112 ~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+.+|++|.+..- ..+..+.++|++||++++.
T Consensus 213 ~~~d~vi~~~g~------------------~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 213 DGYDCYFDNVGG------------------EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp TCEEEEEESSCH------------------HHHHHHHTTEEEEEEEEEC
T ss_pred CCCeEEEECCCh------------------HHHHHHHHHHhcCCEEEEE
Confidence 479999865331 2356778999999998864
No 347
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.87 E-value=0.22 Score=44.58 Aligned_cols=96 Identities=11% Similarity=0.054 Sum_probs=60.8
Q ss_pred HHhCCCCCCCCCeEEEEcC--CCchhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCC--CCC-----CCC
Q 043626 42 ELLALPDDGVPRLLLDIGC--GSGLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQ--GLG-----LRP 111 (291)
Q Consensus 42 elL~~~~~~~~~~VLDiGc--GsG~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~--~~~-----~~~ 111 (291)
+...+.+ +.+||-+|| |.|.....++. .|..|+++|.++..++.+++......++ |..+ .+. ...
T Consensus 149 ~~~~~~~---g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~--d~~~~~~~~~~~~~~~~ 223 (345)
T 2j3h_A 149 EVCSPKE---GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAF--NYKEESDLTAALKRCFP 223 (345)
T ss_dssp TTSCCCT---TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEE--ETTSCSCSHHHHHHHCT
T ss_pred HHhCCCC---CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEE--ecCCHHHHHHHHHHHhC
Confidence 3444554 679999997 34555555554 5889999999999988887433211222 3221 110 112
Q ss_pred CcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 112 GVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 112 ~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+.+|+||.+... ..+..+.++|++||++++.
T Consensus 224 ~~~d~vi~~~g~------------------~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 224 NGIDIYFENVGG------------------KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp TCEEEEEESSCH------------------HHHHHHHTTEEEEEEEEEC
T ss_pred CCCcEEEECCCH------------------HHHHHHHHHHhcCCEEEEE
Confidence 468999865332 2466788999999998863
No 348
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=93.86 E-value=0.51 Score=41.11 Aligned_cols=118 Identities=17% Similarity=0.153 Sum_probs=75.3
Q ss_pred CCeEEEEcCCCchhHHHHHHc---------CCeEEEEe-----CCH----------------------HHHHHHHh---c
Q 043626 52 PRLLLDIGCGSGLSGETLSEN---------GHQWIGLD-----ISQ----------------------SMLNIALE---R 92 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~---------g~~v~gvD-----is~----------------------~ml~~a~~---~ 92 (291)
+..|+|+||-.|.+...++.. ...++++| ..+ ..+....+ +
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 569999999999988887642 26899999 211 11222111 1
Q ss_pred ---C----CcceEEEccCCCCCC-----CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 93 ---E----VEGDLLLGDMGQGLG-----LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 93 ---~----~~~~~~~~D~~~~~~-----~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
. .++.++.+++.+.+| .+.++||+|..-.-. ..+ ....+..++..|+|||.+++.
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~----------Y~~---t~~~le~~~p~l~~GGvIv~D 216 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL----------YEP---TKAVLEAIRPYLTKGSIVAFD 216 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC----------HHH---HHHHHHHHGGGEEEEEEEEES
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc----------cch---HHHHHHHHHHHhCCCcEEEEc
Confidence 1 347888888765543 234579998864321 112 457788899999999999998
Q ss_pred EcCC--ChHHHHHHHHHHHHcCCC
Q 043626 161 IYPE--SVAQRELILGAAMRAGFA 182 (291)
Q Consensus 161 ~~~~--~~~~~~~i~~~~~~aGF~ 182 (291)
-|.. -+.....+.+.+...|..
T Consensus 217 D~~~~~w~G~~~A~~ef~~~~~~~ 240 (257)
T 3tos_A 217 ELDNPKWPGENIAMRKVLGLDHAP 240 (257)
T ss_dssp STTCTTCTHHHHHHHHHTCTTSSC
T ss_pred CCCCCCChHHHHHHHHHHhhCCCe
Confidence 7632 234555566655555443
No 349
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=93.78 E-value=0.098 Score=47.16 Aligned_cols=98 Identities=18% Similarity=0.296 Sum_probs=61.8
Q ss_pred HHHHhCCCCCCCCCeEEEEcCCCc--hhHHHHH-Hc-CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC-C-----CC
Q 043626 40 ALELLALPDDGVPRLLLDIGCGSG--LSGETLS-EN-GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG-L-----GL 109 (291)
Q Consensus 40 ~lelL~~~~~~~~~~VLDiGcGsG--~~~~~L~-~~-g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~-~-----~~ 109 (291)
++....+.+ +..||-+|+|+| .....++ .. |..|+++|.++..++.+++.... .++ |..+. . ..
T Consensus 162 ~l~~~~~~~---g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~-~~~--~~~~~~~~~~~~~~ 235 (347)
T 1jvb_A 162 AVRKASLDP---TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD-YVI--NASMQDPLAEIRRI 235 (347)
T ss_dssp HHHHTTCCT---TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCS-EEE--ETTTSCHHHHHHHH
T ss_pred HHHhcCCCC---CCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCC-EEe--cCCCccHHHHHHHH
Confidence 344445554 679999999854 3443333 45 88999999999998888654322 122 22111 0 01
Q ss_pred CC-CcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 110 RP-GVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 110 ~~-~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
.. +.+|+||....- ...+..+.++|+++|++++.
T Consensus 236 ~~~~~~d~vi~~~g~-----------------~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 236 TESKGVDAVIDLNNS-----------------EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp TTTSCEEEEEESCCC-----------------HHHHTTGGGGEEEEEEEEEC
T ss_pred hcCCCceEEEECCCC-----------------HHHHHHHHHHHhcCCEEEEE
Confidence 12 579999865332 13566778999999998874
No 350
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=93.74 E-value=0.25 Score=43.84 Aligned_cols=89 Identities=15% Similarity=0.118 Sum_probs=58.0
Q ss_pred eEEEEcC-C-CchhHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhcccc
Q 043626 54 LLLDIGC-G-SGLSGETLSEN-GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNAD 130 (291)
Q Consensus 54 ~VLDiGc-G-sG~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~ 130 (291)
.||=+|+ | .|.....+++. |.+|++++.++.-++.+++.....-+-..+......+..+.+|+|+-...
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g-------- 220 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVG-------- 220 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSC--------
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCC--------
Confidence 4999997 3 46666666654 78999999999999888775433111111211111223457998875321
Q ss_pred ccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 131 KASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 131 ~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
...+..+.++|+++|++++.
T Consensus 221 ----------~~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 221 ----------DKVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp ----------HHHHHHHHHTEEEEEEEEEC
T ss_pred ----------cHHHHHHHHHHhcCCEEEEE
Confidence 12577888999999999874
No 351
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=93.67 E-value=0.52 Score=42.72 Aligned_cols=89 Identities=13% Similarity=0.125 Sum_probs=61.1
Q ss_pred CCeEEEEc-CCC-chhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCC-----CCCCCcccEEEECCc
Q 043626 52 PRLLLDIG-CGS-GLSGETLSEN--GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGL-----GLRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiG-cGs-G~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~-----~~~~~~fD~Vis~~~ 122 (291)
+.+||=+| +|. |..+..+++. |..|+++|.++.-++.+++.... .++ |..+.+ ....+.+|+|+-...
T Consensus 172 g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad-~vi--~~~~~~~~~v~~~~~~g~Dvvid~~g 248 (363)
T 4dvj_A 172 APAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAH-HVI--DHSKPLAAEVAALGLGAPAFVFSTTH 248 (363)
T ss_dssp EEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCS-EEE--CTTSCHHHHHHTTCSCCEEEEEECSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCC-EEE--eCCCCHHHHHHHhcCCCceEEEECCC
Confidence 66899998 554 7788888874 68999999999999998775432 122 111111 122457999886422
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
-...+..+.++|+++|++++.
T Consensus 249 -----------------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 249 -----------------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp -----------------HHHHHHHHHHHSCTTCEEEEC
T ss_pred -----------------chhhHHHHHHHhcCCCEEEEE
Confidence 124677889999999999864
No 352
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=93.65 E-value=0.78 Score=48.84 Aligned_cols=130 Identities=14% Similarity=0.099 Sum_probs=85.9
Q ss_pred CCeEEEEcCCCchhHHHHHHcCC--eEEEEeCCHHHHHHHHhcCCcceEEEccCC------------C----CCCCCCCc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGH--QWIGLDISQSMLNIALEREVEGDLLLGDMG------------Q----GLGLRPGV 113 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~--~v~gvDis~~ml~~a~~~~~~~~~~~~D~~------------~----~~~~~~~~ 113 (291)
..++||+-||.|.++.-|...|. .+.++|+++.+++.-+.+++...++..|+. . .+| ..+.
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp-~~~~ 929 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLP-QKGD 929 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCTTSEEECSCHHHHHHHHTTTCSBCSSCCBCC-CTTT
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCCCcEeeccHHHHhHhhhccchhhhhhhhcc-ccCc
Confidence 46899999999999999999985 588999999999998888877666665532 1 111 1357
Q ss_pred ccEEEECCchhhhccccccC----CchHHHHHHHHHHHHHhccCCcEEEEE-EcC----CChHHHHHHHHHHHHcCCCC
Q 043626 114 VDGAISISAVQWLCNADKAS----HEPRLRLKAFFGSLYRCLARGARAVFQ-IYP----ESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 114 fD~Vis~~~l~~l~~~~~~~----~~p~~~l~~~l~~l~~~LkpgG~lv~~-~~~----~~~~~~~~i~~~~~~aGF~~ 183 (291)
+|+|+....-|.+..+.+.. ..+...+-.-+-.+...++|- .+++. +-. ........+...|...||..
T Consensus 930 vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~~~~lriv~~~rPk-~fv~ENV~glls~~~g~~~~~il~~L~~lGY~v 1007 (1330)
T 3av4_A 930 VEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPR-FFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQC 1007 (1330)
T ss_dssp CSEEEECCCCTTTCSSSCCCHHHHHHHHHSHHHHHHHHHHHHCCS-EEEEEEEGGGGTTTTTHHHHHHHHHHHHHTCEE
T ss_pred cceEEecCCCcccccccccccccccchhhHHHHHHHHHHHHhcCc-EEEEeccHHHhccCccHHHHHHHHHHHhcCCee
Confidence 89999887777665433211 112222222233455567886 34443 211 22345778888899999975
No 353
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.55 E-value=0.051 Score=48.33 Aligned_cols=93 Identities=16% Similarity=0.102 Sum_probs=59.9
Q ss_pred HHHHhCCCCCCCCCeEEEEcCCC-chhHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEE
Q 043626 40 ALELLALPDDGVPRLLLDIGCGS-GLSGETLSEN-GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGA 117 (291)
Q Consensus 40 ~lelL~~~~~~~~~~VLDiGcGs-G~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~V 117 (291)
+++...+.+ +.+||-+|+|. |.....+++. |.+|++++ |+.-++.+++... +.+..| .+.+ ...+|+|
T Consensus 134 al~~~~~~~---g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa--~~v~~d-~~~v---~~g~Dvv 203 (315)
T 3goh_A 134 AFEKIPLTK---QREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGV--RHLYRE-PSQV---TQKYFAI 203 (315)
T ss_dssp HHTTSCCCS---CCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTE--EEEESS-GGGC---CSCEEEE
T ss_pred HHhhcCCCC---CCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCC--CEEEcC-HHHh---CCCccEE
Confidence 334444554 78999999954 6666666654 78999999 8888888876433 222224 2333 5679998
Q ss_pred EECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 118 ISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 118 is~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+-...- ..+..+.++|+++|++++.
T Consensus 204 ~d~~g~------------------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 204 FDAVNS------------------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp ECC-------------------------TTGGGEEEEEEEEEE
T ss_pred EECCCc------------------hhHHHHHHHhcCCCEEEEE
Confidence 843211 1124567899999998875
No 354
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.41 E-value=0.11 Score=46.74 Aligned_cols=99 Identities=16% Similarity=0.174 Sum_probs=62.1
Q ss_pred HHHHHhCCCCCCCCCeEEEEcCC--CchhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCC------
Q 043626 39 RALELLALPDDGVPRLLLDIGCG--SGLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGL------ 109 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiGcG--sG~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~------ 109 (291)
.++..+.+.+ +..||-+|++ .|.....++. .|..|+++|.++..++.+++... +.+ .|..+.-.+
T Consensus 160 ~~l~~~~~~~---g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~--~~~-~d~~~~~~~~~~~~~ 233 (347)
T 2hcy_A 160 KALKSANLMA---GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGG--EVF-IDFTKEKDIVGAVLK 233 (347)
T ss_dssp HHHHTTTCCT---TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTC--CEE-EETTTCSCHHHHHHH
T ss_pred HHHHhcCCCC---CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCC--ceE-EecCccHhHHHHHHH
Confidence 3444445544 6799999983 4555544444 58899999999888887766432 222 243211110
Q ss_pred -CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 110 -RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 110 -~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
..+.+|+||.+... ...+..+.++|+++|++++.
T Consensus 234 ~~~~~~D~vi~~~g~-----------------~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 234 ATDGGAHGVINVSVS-----------------EAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp HHTSCEEEEEECSSC-----------------HHHHHHHTTSEEEEEEEEEC
T ss_pred HhCCCCCEEEECCCc-----------------HHHHHHHHHHHhcCCEEEEE
Confidence 11268999876432 14567788999999998864
No 355
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.35 E-value=0.21 Score=45.44 Aligned_cols=91 Identities=20% Similarity=0.214 Sum_probs=58.4
Q ss_pred CCeEEEEcCCC-chhHHHHHHc-CC-eEEEEeCCHHHHHHHHhcCCcceEEEcc-CCCCC-----CCCCCcccEEEECCc
Q 043626 52 PRLLLDIGCGS-GLSGETLSEN-GH-QWIGLDISQSMLNIALEREVEGDLLLGD-MGQGL-----GLRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGs-G~~~~~L~~~-g~-~v~gvDis~~ml~~a~~~~~~~~~~~~D-~~~~~-----~~~~~~fD~Vis~~~ 122 (291)
+.+||-+|+|. |..+..+++. |. .|+++|.++..++.+++.... .++... ....+ ....+.+|+|+-...
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT-DCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS-EEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc-EEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 67999999864 6666666654 76 899999999988888764332 122111 00101 011236899985422
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHHhccCC-cEEEEE
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYRCLARG-ARAVFQ 160 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~~Lkpg-G~lv~~ 160 (291)
- ...+..+.++|+++ |++++.
T Consensus 275 ~-----------------~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 275 T-----------------AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp C-----------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred C-----------------HHHHHHHHHHhhcCCCEEEEE
Confidence 1 14567888999999 998863
No 356
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=93.31 E-value=1.4 Score=39.31 Aligned_cols=102 Identities=19% Similarity=0.153 Sum_probs=61.3
Q ss_pred HHHHHhCCCCCCCCCeEEEEcCCCc-hhHHHHHH-c-CCeEEEEeCCHHHHHHHHhcCCcceEEEcc--CCCCC-C-CCC
Q 043626 39 RALELLALPDDGVPRLLLDIGCGSG-LSGETLSE-N-GHQWIGLDISQSMLNIALEREVEGDLLLGD--MGQGL-G-LRP 111 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiGcGsG-~~~~~L~~-~-g~~v~gvDis~~ml~~a~~~~~~~~~~~~D--~~~~~-~-~~~ 111 (291)
.+++.....+ +.+||=+|+|++ .+...++. . +.+|+++|.++.-++.+++......+-..+ ..+.+ . ...
T Consensus 154 ~~l~~~~~~~---g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g 230 (348)
T 4eez_A 154 KAIKVSGVKP---GDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGG 230 (348)
T ss_dssp HHHHHHTCCT---TCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTS
T ss_pred eeecccCCCC---CCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCC
Confidence 3445555555 679999999874 34444443 4 589999999999998888765442111111 10000 0 112
Q ss_pred CcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 112 GVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 112 ~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
..+|.++....- ...+....++|+++|++++.
T Consensus 231 ~g~d~~~~~~~~-----------------~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 231 LGVQSAIVCAVA-----------------RIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp SCEEEEEECCSC-----------------HHHHHHHHHTEEEEEEEEEC
T ss_pred CCceEEEEeccC-----------------cchhheeheeecCCceEEEE
Confidence 245666643221 24567788999999998873
No 357
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.27 E-value=0.078 Score=47.77 Aligned_cols=90 Identities=14% Similarity=0.086 Sum_probs=58.6
Q ss_pred CCeEEEEcCCC-chhHHHHHH-c--CCeEEEEeCCHHHHHHHHhcCCcceEEE----ccCCCCCCCCCCcccEEEECCch
Q 043626 52 PRLLLDIGCGS-GLSGETLSE-N--GHQWIGLDISQSMLNIALEREVEGDLLL----GDMGQGLGLRPGVVDGAISISAV 123 (291)
Q Consensus 52 ~~~VLDiGcGs-G~~~~~L~~-~--g~~v~gvDis~~ml~~a~~~~~~~~~~~----~D~~~~~~~~~~~fD~Vis~~~l 123 (291)
+.+||-+|+|. |..+..+++ . |..|+++|.|+..++.+++.... .++. .|....+. ....+|+|+-....
T Consensus 171 g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~vi~~~~~~~~~~~~~-~g~g~D~vid~~g~ 248 (344)
T 2h6e_A 171 EPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGAD-YVSEMKDAESLINKLT-DGLGASIAIDLVGT 248 (344)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCS-EEECHHHHHHHHHHHH-TTCCEEEEEESSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCC-EEeccccchHHHHHhh-cCCCccEEEECCCC
Confidence 77999999964 555555554 5 78999999999999988764332 1221 11100111 12369999865321
Q ss_pred hhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 124 QWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 124 ~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
...+..+.++|+++|++++.
T Consensus 249 -----------------~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 249 -----------------EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp -----------------HHHHHHHHHHEEEEEEEEEC
T ss_pred -----------------hHHHHHHHHHhhcCCEEEEe
Confidence 13567788999999998864
No 358
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.16 E-value=0.087 Score=48.26 Aligned_cols=100 Identities=17% Similarity=0.115 Sum_probs=62.4
Q ss_pred HHHHhC-CCCCCCCCeEEEEcCCC-chhHHHHHHc-C-CeEEEEeCCHHHHHHHHhcCCcceEEEcc------CCCCC-C
Q 043626 40 ALELLA-LPDDGVPRLLLDIGCGS-GLSGETLSEN-G-HQWIGLDISQSMLNIALEREVEGDLLLGD------MGQGL-G 108 (291)
Q Consensus 40 ~lelL~-~~~~~~~~~VLDiGcGs-G~~~~~L~~~-g-~~v~gvDis~~ml~~a~~~~~~~~~~~~D------~~~~~-~ 108 (291)
+++.+. +.+ +.+||-+|+|. |..+..+++. | .+|+++|.++..++.+++.... .++..+ +.+.+ .
T Consensus 186 al~~~~~~~~---g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~-~vi~~~~~~~~~~~~~v~~ 261 (380)
T 1vj0_A 186 AFDEYPESFA---GKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD-LTLNRRETSVEERRKAIMD 261 (380)
T ss_dssp HHHTCSSCCB---TCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCS-EEEETTTSCHHHHHHHHHH
T ss_pred HHHhcCCCCC---CCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCc-EEEeccccCcchHHHHHHH
Confidence 344445 444 67999999764 5566666654 7 6999999999999988764332 222221 00000 0
Q ss_pred C-CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 109 L-RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 109 ~-~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
. ....+|+||-.... ...+..+.++|+++|++++.
T Consensus 262 ~~~g~g~Dvvid~~g~-----------------~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 262 ITHGRGADFILEATGD-----------------SRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp HTTTSCEEEEEECSSC-----------------TTHHHHHHHHEEEEEEEEEC
T ss_pred HhCCCCCcEEEECCCC-----------------HHHHHHHHHHHhcCCEEEEE
Confidence 1 12269999865321 13466788999999998864
No 359
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.12 E-value=0.14 Score=45.88 Aligned_cols=97 Identities=20% Similarity=0.082 Sum_probs=60.6
Q ss_pred HHHhCCCCCCCCCeEEEEcCCC--chhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCC-----C-CCC
Q 043626 41 LELLALPDDGVPRLLLDIGCGS--GLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGL-----G-LRP 111 (291)
Q Consensus 41 lelL~~~~~~~~~~VLDiGcGs--G~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~-----~-~~~ 111 (291)
.+...+.+ +.+||-+|||+ |..+..++. .|.+|+++|.++..++.+++.... .++...- ..+ . ...
T Consensus 137 ~~~~~~~~---g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~-~~~~~~~-~~~~~~~~~~~~~ 211 (340)
T 3gms_A 137 TETLNLQR---NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAA-YVIDTST-APLYETVMELTNG 211 (340)
T ss_dssp HTTSCCCT---TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCS-EEEETTT-SCHHHHHHHHTTT
T ss_pred HHhcccCC---CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCc-EEEeCCc-ccHHHHHHHHhCC
Confidence 34455555 77999999974 555555555 489999999999888888775432 1222111 111 0 112
Q ss_pred CcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 112 GVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 112 ~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
..+|+|+....-. . +..+..+|+++|++++.
T Consensus 212 ~g~Dvvid~~g~~-----------------~-~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 212 IGADAAIDSIGGP-----------------D-GNELAFSLRPNGHFLTI 242 (340)
T ss_dssp SCEEEEEESSCHH-----------------H-HHHHHHTEEEEEEEEEC
T ss_pred CCCcEEEECCCCh-----------------h-HHHHHHHhcCCCEEEEE
Confidence 4799998653321 1 22344899999999874
No 360
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=93.10 E-value=0.098 Score=47.45 Aligned_cols=102 Identities=14% Similarity=0.035 Sum_probs=61.4
Q ss_pred HHHHHhCCCCCCCCCeEEEEcCCC-chhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCC-CCC-CCCCCcc
Q 043626 39 RALELLALPDDGVPRLLLDIGCGS-GLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLGDMG-QGL-GLRPGVV 114 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiGcGs-G~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~-~~~-~~~~~~f 114 (291)
.++....+.+ +.+||-+|+|. |.....+++ .|..|+++|.++..++.+++.... .++...-. +.. ... +.+
T Consensus 170 ~~l~~~~~~~---g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~-~v~~~~~~~~~~~~~~-~~~ 244 (360)
T 1piw_A 170 SPLVRNGCGP---GKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGAD-HYIATLEEGDWGEKYF-DTF 244 (360)
T ss_dssp HHHHHTTCST---TCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCS-EEEEGGGTSCHHHHSC-SCE
T ss_pred HHHHHcCCCC---CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCC-EEEcCcCchHHHHHhh-cCC
Confidence 3344455555 67999999854 555556665 478899999999888888764322 22222110 000 011 479
Q ss_pred cEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 115 DGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 115 D~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
|+||....... ...+..+.++|++||++++.
T Consensus 245 D~vid~~g~~~---------------~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 245 DLIVVCASSLT---------------DIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEEEECCSCST---------------TCCTTTGGGGEEEEEEEEEC
T ss_pred CEEEECCCCCc---------------HHHHHHHHHHhcCCCEEEEe
Confidence 99986533200 01234567889999998763
No 361
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=93.03 E-value=0.12 Score=46.94 Aligned_cols=101 Identities=17% Similarity=0.163 Sum_probs=59.5
Q ss_pred HHHHhCCC-CCCCCCeEEEEcCCC-chhHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccE
Q 043626 40 ALELLALP-DDGVPRLLLDIGCGS-GLSGETLSEN-GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDG 116 (291)
Q Consensus 40 ~lelL~~~-~~~~~~~VLDiGcGs-G~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~ 116 (291)
++....+. + +.+||-+|+|. |..+..+++. |..|+++|.++..++.+.+....-.++..+-.+.+....+.+|+
T Consensus 171 ~l~~~~~~~~---g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~ 247 (357)
T 2cf5_A 171 PLSHFGLKQP---GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDY 247 (357)
T ss_dssp HHHHTSTTST---TCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEE
T ss_pred HHHhcCCCCC---CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCE
Confidence 34445555 4 67999999764 5555555543 78999999999888887733321122221100000001236899
Q ss_pred EEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 117 AISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 117 Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
|+-...-. ..+....++|+++|++++.
T Consensus 248 vid~~g~~-----------------~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 248 VIDTVPVH-----------------HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp EEECCCSC-----------------CCSHHHHTTEEEEEEEEEC
T ss_pred EEECCCCh-----------------HHHHHHHHHhccCCEEEEe
Confidence 98643211 1244567899999998864
No 362
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=92.59 E-value=0.18 Score=45.92 Aligned_cols=102 Identities=17% Similarity=0.202 Sum_probs=59.3
Q ss_pred HHHHHhCCC-CCCCCCeEEEEcCCC-chhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCccc
Q 043626 39 RALELLALP-DDGVPRLLLDIGCGS-GLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVD 115 (291)
Q Consensus 39 ~~lelL~~~-~~~~~~~VLDiGcGs-G~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD 115 (291)
.++..+.+. + +.+||-+|+|. |.....++. .|..|+++|.++..++.+.+....-.++..+-.+.+....+.+|
T Consensus 177 ~al~~~~~~~~---g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D 253 (366)
T 1yqd_A 177 SPLKYFGLDEP---GKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLD 253 (366)
T ss_dssp HHHHHTTCCCT---TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEE
T ss_pred HHHHhcCcCCC---CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCC
Confidence 344455555 4 67899999754 444455554 47899999999988887764332212222110000100114689
Q ss_pred EEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 116 GAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 116 ~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+|+...... ..+..+.++|+++|++++.
T Consensus 254 ~vid~~g~~-----------------~~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 254 GIIDTVSAV-----------------HPLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp EEEECCSSC-----------------CCSHHHHHHEEEEEEEEEC
T ss_pred EEEECCCcH-----------------HHHHHHHHHHhcCCEEEEE
Confidence 998653321 1234567889999998863
No 363
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=92.42 E-value=0.42 Score=42.82 Aligned_cols=89 Identities=15% Similarity=0.188 Sum_probs=60.3
Q ss_pred CCeEEEEcCCC-chhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC-----C-CCCcccEEEECCc
Q 043626 52 PRLLLDIGCGS-GLSGETLSEN--GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLG-----L-RPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGs-G~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~-----~-~~~~fD~Vis~~~ 122 (291)
+.+||-+|+|. |..+..+++. +..|+++|.++.-++.+++.... .++..+ ..+. . ....+|+|+-...
T Consensus 172 g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~-~~i~~~--~~~~~~v~~~t~g~g~d~v~d~~G 248 (345)
T 3jv7_A 172 GSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGAD-AAVKSG--AGAADAIRELTGGQGATAVFDFVG 248 (345)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCS-EEEECS--TTHHHHHHHHHGGGCEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCC-EEEcCC--CcHHHHHHHHhCCCCCeEEEECCC
Confidence 67999999875 6666677654 58999999999999999875433 122211 1110 0 1226898885422
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
- ...+..+.++|+++|++++.
T Consensus 249 ~-----------------~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 249 A-----------------QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp C-----------------HHHHHHHHHHEEEEEEEEEC
T ss_pred C-----------------HHHHHHHHHHHhcCCEEEEE
Confidence 1 24677889999999998864
No 364
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=92.22 E-value=0.2 Score=46.55 Aligned_cols=41 Identities=15% Similarity=0.067 Sum_probs=35.2
Q ss_pred CCeEEEEcCCCchhHHHHH-HcC---CeEEEEeCCHHHHHHHHhc
Q 043626 52 PRLLLDIGCGSGLSGETLS-ENG---HQWIGLDISQSMLNIALER 92 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~-~~g---~~v~gvDis~~ml~~a~~~ 92 (291)
+..|+||||+.|..+..++ ..+ ..|+++|.++...+..+++
T Consensus 227 ~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n 271 (409)
T 2py6_A 227 SEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNV 271 (409)
T ss_dssp SCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHH
T ss_pred CCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHH
Confidence 6799999999999999887 443 6899999999988887764
No 365
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=91.98 E-value=0.42 Score=43.11 Aligned_cols=86 Identities=17% Similarity=0.158 Sum_probs=57.2
Q ss_pred CeEEEEcCCC-chhH-HHHH-Hc-CCe-EEEEeCCHH---HHHHHHhcCCcceEEEccCCCCCCCC-----CCcccEEEE
Q 043626 53 RLLLDIGCGS-GLSG-ETLS-EN-GHQ-WIGLDISQS---MLNIALEREVEGDLLLGDMGQGLGLR-----PGVVDGAIS 119 (291)
Q Consensus 53 ~~VLDiGcGs-G~~~-~~L~-~~-g~~-v~gvDis~~---ml~~a~~~~~~~~~~~~D~~~~~~~~-----~~~fD~Vis 119 (291)
.+||-+|+|. |..+ ..++ +. |.. |+++|.++. .++.+++... +.+ |..+. .+. .+.+|+||-
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa--~~v--~~~~~-~~~~i~~~~gg~Dvvid 248 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDA--TYV--DSRQT-PVEDVPDVYEQMDFIYE 248 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTC--EEE--ETTTS-CGGGHHHHSCCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCC--ccc--CCCcc-CHHHHHHhCCCCCEEEE
Confidence 7999999864 6666 6666 54 665 999999988 7888876432 333 33211 110 236899885
Q ss_pred CCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 120 ISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 120 ~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
...- ...+..+.++|+++|++++.
T Consensus 249 ~~g~-----------------~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 249 ATGF-----------------PKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp CSCC-----------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCC-----------------hHHHHHHHHHHhcCCEEEEE
Confidence 4221 13567788999999998874
No 366
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=91.89 E-value=0.39 Score=38.66 Aligned_cols=138 Identities=19% Similarity=0.167 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCC
Q 043626 32 IQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSEN--GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGL 109 (291)
Q Consensus 32 iq~~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~ 109 (291)
.|....+.++..+... +.-|||+|-|+|..--.|.+. +..++.+|-.-.. .-...-++-+++++|+.+.++.
T Consensus 25 aQR~~L~~a~~~v~~~----~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~--hp~~~P~~e~~ilGdi~~tL~~ 98 (174)
T 3iht_A 25 SQRACLEHAIAQTAGL----SGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVAS--HPDSTPPEAQLILGDIRETLPA 98 (174)
T ss_dssp HHHHHHHHHHHHTTTC----CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCC--CGGGCCCGGGEEESCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCC----CCceEEecCCCChhHHHHHHhCCCCcEEEEEeeecc--CCCCCCchHheecccHHHHHHH
Confidence 4666666777776554 458999999999999999987 4789999841100 0000112246677766443332
Q ss_pred C----CCcccEEEECCchhhhccccccCCchHHHH--HHHH-HHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCC
Q 043626 110 R----PGVVDGAISISAVQWLCNADKASHEPRLRL--KAFF-GSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFA 182 (291)
Q Consensus 110 ~----~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l--~~~l-~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~ 182 (291)
. ....-+|. .|...+++.+.. .+++ .-+..+|.|||.++-..- ..|.
T Consensus 99 ~~~r~g~~a~LaH----------aD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~p----------------l~~~ 152 (174)
T 3iht_A 99 TLERFGATASLVH----------ADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDR----------------MYFE 152 (174)
T ss_dssp HHHHHCSCEEEEE----------ECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSC----------------CCCS
T ss_pred HHHhcCCceEEEE----------eecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCc----------------cCCC
Confidence 1 11222222 222233333322 2222 245688999998886431 1133
Q ss_pred CcEEEeCCCCCCCCcEEEE
Q 043626 183 GGVVVDYPHSSKSRKEFLV 201 (291)
Q Consensus 183 ~~~~~~~p~~~~~~~~~l~ 201 (291)
+-.-+.-|.......||++
T Consensus 153 ~l~~lplP~gi~~gRyf~Y 171 (174)
T 3iht_A 153 GLEELPLPPGAVVGRCFIY 171 (174)
T ss_dssp SCEEECCCTTCCTTTCEEE
T ss_pred CcccCCCCCCCCCCceEEE
Confidence 3344566666656566554
No 367
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=91.63 E-value=0.91 Score=40.65 Aligned_cols=89 Identities=16% Similarity=0.157 Sum_probs=57.9
Q ss_pred CCeEEEEcCCC-chhHHHHHH-cCC-eEEEEeCCHHHHHHHHhcCCcceEEEccCCC-CC-----C-CCCCcccEEEECC
Q 043626 52 PRLLLDIGCGS-GLSGETLSE-NGH-QWIGLDISQSMLNIALEREVEGDLLLGDMGQ-GL-----G-LRPGVVDGAISIS 121 (291)
Q Consensus 52 ~~~VLDiGcGs-G~~~~~L~~-~g~-~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~-~~-----~-~~~~~fD~Vis~~ 121 (291)
+.+||-+|+|. |.....++. .|. +|+++|.++..++.+++.... .++ |... .+ . .....+|+||...
T Consensus 168 g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~-~~~--~~~~~~~~~~v~~~~~g~g~D~vid~~ 244 (348)
T 2d8a_A 168 GKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGAD-YVI--NPFEEDVVKEVMDITDGNGVDVFLEFS 244 (348)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCS-EEE--CTTTSCHHHHHHHHTTTSCEEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC-EEE--CCCCcCHHHHHHHHcCCCCCCEEEECC
Confidence 77999999953 555555554 477 999999999998888764322 122 2211 10 0 0123699998653
Q ss_pred chhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 122 AVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 122 ~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
.. ...+..+.++|+++|++++.
T Consensus 245 g~-----------------~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 245 GA-----------------PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp CC-----------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CC-----------------HHHHHHHHHHHhcCCEEEEE
Confidence 21 14567788999999998864
No 368
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=91.62 E-value=1.2 Score=40.99 Aligned_cols=43 Identities=14% Similarity=0.052 Sum_probs=33.2
Q ss_pred CCeEEEEcCCCchhHHHHHHc---------CCeEEEEeCCHHHHHHHHhcCC
Q 043626 52 PRLLLDIGCGSGLSGETLSEN---------GHQWIGLDISQSMLNIALEREV 94 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~---------g~~v~gvDis~~ml~~a~~~~~ 94 (291)
+..|+|+|.|+|.+..-+... ...++.||+|+...+.-+++..
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 568999999999987766532 1489999999988876665543
No 369
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.61 E-value=2.7 Score=33.59 Aligned_cols=94 Identities=13% Similarity=0.116 Sum_probs=58.2
Q ss_pred CCeEEEEcCCC-ch-hHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC--C-CC-CCCcccEEEECCchh
Q 043626 52 PRLLLDIGCGS-GL-SGETLSEN-GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG--L-GL-RPGVVDGAISISAVQ 124 (291)
Q Consensus 52 ~~~VLDiGcGs-G~-~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~--~-~~-~~~~fD~Vis~~~l~ 124 (291)
..+|+=+|||. |. ++..|.+. |+.|+++|.++..++.+... .+.++.+|..+. + .. ....+|+||....-.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~--g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~ 116 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE--GRNVISGDATDPDFWERILDTGHVKLVLLAMPHH 116 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT--TCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC--CCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCCh
Confidence 45899998874 33 34555667 89999999999988777653 355677776431 1 11 234689888642111
Q ss_pred hhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 125 WLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 125 ~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
. ....+-.+.+.+.|++.++...
T Consensus 117 ------------~--~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 117 ------------Q--GNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp ------------H--HHHHHHHHHHHTTCCSEEEEEE
T ss_pred ------------H--HHHHHHHHHHHHCCCCEEEEEE
Confidence 0 1122334556667788887765
No 370
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=91.23 E-value=0.95 Score=40.54 Aligned_cols=88 Identities=13% Similarity=0.158 Sum_probs=57.4
Q ss_pred CCeEEEEc-CCC-chhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCC-----CCCCCcccEEEECCch
Q 043626 52 PRLLLDIG-CGS-GLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGL-----GLRPGVVDGAISISAV 123 (291)
Q Consensus 52 ~~~VLDiG-cGs-G~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~-----~~~~~~fD~Vis~~~l 123 (291)
+.+||-+| +|. |..+..++. .|.+|+++|.++.-++.+++.... .++ |..+.+ ......+|+|+....
T Consensus 151 g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~vi--~~~~~~~~~~~~~~~~g~Dvv~d~~g- 226 (346)
T 3fbg_A 151 GKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGAD-IVL--NHKESLLNQFKTQGIELVDYVFCTFN- 226 (346)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCS-EEE--CTTSCHHHHHHHHTCCCEEEEEESSC-
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCc-EEE--ECCccHHHHHHHhCCCCccEEEECCC-
Confidence 67899984 443 555555555 478999999999999988875432 122 111111 012346999886422
Q ss_pred hhhccccccCCchHHHHHHHHHHHHHhccCCcEEEE
Q 043626 124 QWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVF 159 (291)
Q Consensus 124 ~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~ 159 (291)
-...+..+.++|+++|+++.
T Consensus 227 ----------------~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 227 ----------------TDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp ----------------HHHHHHHHHHHEEEEEEEEE
T ss_pred ----------------chHHHHHHHHHhccCCEEEE
Confidence 12456788899999999975
No 371
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=91.18 E-value=0.4 Score=43.00 Aligned_cols=93 Identities=18% Similarity=0.140 Sum_probs=59.1
Q ss_pred HhCCCCCCCCCeEEEEcCCC-chhHHHHHH-cCC-eEEEEeCCHHHHHHHHhcCCcceEEEccCCC-CCC-----CCCCc
Q 043626 43 LLALPDDGVPRLLLDIGCGS-GLSGETLSE-NGH-QWIGLDISQSMLNIALEREVEGDLLLGDMGQ-GLG-----LRPGV 113 (291)
Q Consensus 43 lL~~~~~~~~~~VLDiGcGs-G~~~~~L~~-~g~-~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~-~~~-----~~~~~ 113 (291)
...+ + +.+||-+|+|. |.....+++ .|. .|+++|.++..++.+++. .. .++ |..+ .+. .....
T Consensus 160 ~~~~-~---g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~-~v~--~~~~~~~~~~~~~~~~~g 231 (343)
T 2dq4_A 160 GSGV-S---GKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-AD-RLV--NPLEEDLLEVVRRVTGSG 231 (343)
T ss_dssp TTCC-T---TSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CS-EEE--CTTTSCHHHHHHHHHSSC
T ss_pred hCCC-C---CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HH-hcc--CcCccCHHHHHHHhcCCC
Confidence 4455 4 77999999854 555555555 477 899999999888877653 21 222 2211 100 00246
Q ss_pred ccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 114 VDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 114 fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+|+|+....- ...+..+.++|+++|++++.
T Consensus 232 ~D~vid~~g~-----------------~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 232 VEVLLEFSGN-----------------EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp EEEEEECSCC-----------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCEEEECCCC-----------------HHHHHHHHHHHhcCCEEEEE
Confidence 8999864221 14567788999999998864
No 372
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=91.05 E-value=0.54 Score=45.24 Aligned_cols=92 Identities=17% Similarity=0.172 Sum_probs=56.1
Q ss_pred CCCCCCCcccEEEECC----chhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCC
Q 043626 106 GLGLRPGVVDGAISIS----AVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGF 181 (291)
Q Consensus 106 ~~~~~~~~fD~Vis~~----~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF 181 (291)
++|- .+.||+|+.+- -.||... ..+=.-.+..+-.....+|+|||.+++.-|+.-+...+.+...+.+. |
T Consensus 215 G~p~-~~ryDlvfvn~~t~yr~HHyqQ----CeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRk-F 288 (670)
T 4gua_A 215 GFPP-QARYDLVFINIGTKYRNHHFQQ----CEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARK-F 288 (670)
T ss_dssp CCCC-CCCEEEEEECCCCCCCSCHHHH----HHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHT-E
T ss_pred CCCC-CCcccEEEEecCCCcccchHHH----HHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhh-e
Confidence 4564 47999999873 2333311 00111114555667789999999999999998877777777776665 6
Q ss_pred CCcEEEeCCCCCCCCcEEEEEe
Q 043626 182 AGGVVVDYPHSSKSRKEFLVLT 203 (291)
Q Consensus 182 ~~~~~~~~p~~~~~~~~~l~l~ 203 (291)
.-..+..-.....+...++++.
T Consensus 289 ~~~rv~~p~~~~snTEv~~~f~ 310 (670)
T 4gua_A 289 VRVSAARPDCVSSNTEMYLIFR 310 (670)
T ss_dssp EEEEEECCTTCSBTTCEEEEEE
T ss_pred eeeeeeCCCccccCceEEEEEE
Confidence 6533333333344445544443
No 373
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=90.89 E-value=8.7 Score=34.49 Aligned_cols=99 Identities=8% Similarity=0.121 Sum_probs=66.8
Q ss_pred CCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhc----------------------------CCcceEEE
Q 043626 52 PRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALER----------------------------EVEGDLLL 100 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~----------------------------~~~~~~~~ 100 (291)
...|+-+|||.=.....|... +..|+=||. |..++.=++. .....++.
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 568999999998888888764 478999998 4444321111 12246777
Q ss_pred ccCCCC---------CCCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 101 GDMGQG---------LGLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 101 ~D~~~~---------~~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+|+.+. ..+.+...=++|+-.++.|+. ......+|+.+.....+|..+++.
T Consensus 170 ~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~---------~~~~~~ll~~ia~~f~~~~~i~yE 229 (334)
T 3iei_A 170 ADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMT---------PEQSANLLKWAANSFERAMFINYE 229 (334)
T ss_dssp CCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSC---------HHHHHHHHHHHHHHCSSEEEEEEE
T ss_pred cccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCC---------HHHHHHHHHHHHHhCCCceEEEEe
Confidence 887541 124455666888889999983 344778888888877655555443
No 374
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=90.83 E-value=0.88 Score=40.86 Aligned_cols=96 Identities=9% Similarity=0.024 Sum_probs=59.6
Q ss_pred HHhCCCCCCCC--CeEEEEcCCC--chhHHHHH-HcCC-eEEEEeCCHHHHHHHHhcCCcceEEEccCCCC-C-----CC
Q 043626 42 ELLALPDDGVP--RLLLDIGCGS--GLSGETLS-ENGH-QWIGLDISQSMLNIALEREVEGDLLLGDMGQG-L-----GL 109 (291)
Q Consensus 42 elL~~~~~~~~--~~VLDiGcGs--G~~~~~L~-~~g~-~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~-~-----~~ 109 (291)
+...+.. + .+||-.|++. |.....++ ..|. .|+++|.++..++.+.+... .+.+ .|..+. + ..
T Consensus 152 ~~~~~~~---g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g-~~~~-~d~~~~~~~~~~~~~ 226 (357)
T 2zb4_A 152 EKGHITA---GSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELG-FDAA-INYKKDNVAEQLRES 226 (357)
T ss_dssp HHSCCCT---TSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC-CSEE-EETTTSCHHHHHHHH
T ss_pred HhcCCCC---CCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC-CceE-EecCchHHHHHHHHh
Confidence 4555554 6 7999999833 44444444 3577 99999999988888776332 1221 232111 0 01
Q ss_pred CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 110 RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 110 ~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
..+.+|+||.+..- ..+..+.++|+++|++++.
T Consensus 227 ~~~~~d~vi~~~G~------------------~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 227 CPAGVDVYFDNVGG------------------NISDTVISQMNENSHIILC 259 (357)
T ss_dssp CTTCEEEEEESCCH------------------HHHHHHHHTEEEEEEEEEC
T ss_pred cCCCCCEEEECCCH------------------HHHHHHHHHhccCcEEEEE
Confidence 12268998865331 3466788999999998863
No 375
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=90.78 E-value=1.4 Score=39.30 Aligned_cols=100 Identities=15% Similarity=0.088 Sum_probs=62.1
Q ss_pred HHHHHhCCCCCCCCCeEEEEcCCC-chhHHHHHHc-C-CeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC------C
Q 043626 39 RALELLALPDDGVPRLLLDIGCGS-GLSGETLSEN-G-HQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLG------L 109 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiGcGs-G~~~~~L~~~-g-~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~------~ 109 (291)
.++......+ +.+||=+|+|. |.++..+++. | ..++++|.++.-++.+++.... .++...- .... .
T Consensus 151 ~~~~~~~~~~---g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~-~~i~~~~-~~~~~~~~~~~ 225 (346)
T 4a2c_A 151 HAFHLAQGCE---NKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAM-QTFNSSE-MSAPQMQSVLR 225 (346)
T ss_dssp HHHHHTTCCT---TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS-EEEETTT-SCHHHHHHHHG
T ss_pred HHHHHhccCC---CCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCe-EEEeCCC-CCHHHHHHhhc
Confidence 3445555555 77999999875 4455555544 6 5678999999999998876443 2222110 1000 0
Q ss_pred CCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 110 RPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 110 ~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
....+|+|+..... ...+....++|++||++++.
T Consensus 226 ~~~g~d~v~d~~G~-----------------~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 226 ELRFNQLILETAGV-----------------PQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp GGCSSEEEEECSCS-----------------HHHHHHHHHHCCTTCEEEEC
T ss_pred ccCCcccccccccc-----------------cchhhhhhheecCCeEEEEE
Confidence 12356777754221 24567788999999999874
No 376
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=90.77 E-value=0.3 Score=43.42 Aligned_cols=88 Identities=11% Similarity=0.082 Sum_probs=54.2
Q ss_pred eEEEEcC--CCchhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEc-cC-CCCC-CCCCCcccEEEECCchhhhc
Q 043626 54 LLLDIGC--GSGLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLG-DM-GQGL-GLRPGVVDGAISISAVQWLC 127 (291)
Q Consensus 54 ~VLDiGc--GsG~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~-D~-~~~~-~~~~~~fD~Vis~~~l~~l~ 127 (291)
.||-+|+ |.|.....+++ .|..+++++.++.-++.+++.... .++.. +. ...+ ....+.+|+|+-...-
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~-~~i~~~~~~~~~~~~~~~~~~d~vid~~g~---- 226 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAK-EVLAREDVMAERIRPLDKQRWAAAVDPVGG---- 226 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCS-EEEECC---------CCSCCEEEEEECSTT----
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCc-EEEecCCcHHHHHHHhcCCcccEEEECCcH----
Confidence 7999997 34666666665 478899999998888888764322 12211 11 0101 1223468998854221
Q ss_pred cccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 128 NADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 128 ~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
..+..+.++|+++|++++.
T Consensus 227 --------------~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 227 --------------RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp --------------TTHHHHHHTEEEEEEEEEC
T ss_pred --------------HHHHHHHHhhccCCEEEEE
Confidence 1355678899999998864
No 377
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=90.74 E-value=0.43 Score=42.44 Aligned_cols=90 Identities=11% Similarity=-0.087 Sum_probs=57.6
Q ss_pred CCeEEEEcC-C-CchhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC---C--CCCCCcccEEEECCch
Q 043626 52 PRLLLDIGC-G-SGLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG---L--GLRPGVVDGAISISAV 123 (291)
Q Consensus 52 ~~~VLDiGc-G-sG~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~---~--~~~~~~fD~Vis~~~l 123 (291)
+.+||-+|+ | .|.....++. .|.+|+++|.++..++.+++.... ..+..+-... + ......+|+|+....-
T Consensus 141 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~-~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAW-ETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQ 219 (325)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS-EEEETTTSCHHHHHHHHTTTCCEEEEEESSCG
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC-EEEeCCCccHHHHHHHHhCCCCceEEEECCCh
Confidence 679999983 3 3666655555 488999999999999988765432 2222111010 0 0112469999865332
Q ss_pred hhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 124 QWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 124 ~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
..+..+.++|++||++++.
T Consensus 220 ------------------~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 220 ------------------DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp ------------------GGHHHHHTTEEEEEEEEEC
T ss_pred ------------------HHHHHHHHHhcCCCEEEEE
Confidence 2355678899999999875
No 378
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=90.49 E-value=0.67 Score=41.77 Aligned_cols=94 Identities=15% Similarity=0.170 Sum_probs=58.6
Q ss_pred HhCCCCCCCCCeEEEEcCC--CchhHHHHH-HcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC-C------CCCCC
Q 043626 43 LLALPDDGVPRLLLDIGCG--SGLSGETLS-ENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG-L------GLRPG 112 (291)
Q Consensus 43 lL~~~~~~~~~~VLDiGcG--sG~~~~~L~-~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~-~------~~~~~ 112 (291)
...+.+ +..||-+|++ .|.....++ ..|..|+++|.++..++.+++.... .++ |..+. + .....
T Consensus 165 ~~~~~~---g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~-~~~--d~~~~~~~~~~~~~~~~~ 238 (351)
T 1yb5_A 165 SACVKA---GESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAH-EVF--NHREVNYIDKIKKYVGEK 238 (351)
T ss_dssp TSCCCT---TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-EEE--ETTSTTHHHHHHHHHCTT
T ss_pred hhCCCC---cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCC-EEE--eCCCchHHHHHHHHcCCC
Confidence 334444 6799999973 344444444 4588999999999988877654322 122 22111 0 01123
Q ss_pred cccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 113 VVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 113 ~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
.+|+||.+..- ..+....++|+++|++++.
T Consensus 239 ~~D~vi~~~G~------------------~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 239 GIDIIIEMLAN------------------VNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp CEEEEEESCHH------------------HHHHHHHHHEEEEEEEEEC
T ss_pred CcEEEEECCCh------------------HHHHHHHHhccCCCEEEEE
Confidence 68999865321 2356678999999998864
No 379
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=90.37 E-value=0.56 Score=41.76 Aligned_cols=90 Identities=20% Similarity=0.119 Sum_probs=57.3
Q ss_pred CCeEEEEcCC--CchhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC---C-C-CCCCcccEEEECCch
Q 043626 52 PRLLLDIGCG--SGLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG---L-G-LRPGVVDGAISISAV 123 (291)
Q Consensus 52 ~~~VLDiGcG--sG~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~---~-~-~~~~~fD~Vis~~~l 123 (291)
+.+||-+|++ .|..+..++. .|.+|+++|.++..++.+++.... .++..+-... + . .....+|+|+....-
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~-~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~ 227 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAE-YLINASKEDILRQVLKFTNGKGVDASFDSVGK 227 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-EEEETTTSCHHHHHHHHTTTSCEEEEEECCGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc-EEEeCCCchHHHHHHHHhCCCCceEEEECCCh
Confidence 6799999953 3555555554 478999999999999988775422 2222211010 0 0 113469999865332
Q ss_pred hhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 124 QWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 124 ~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
..+..+.++|++||++++.
T Consensus 228 ------------------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 228 ------------------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp ------------------GGHHHHHHHEEEEEEEEEC
T ss_pred ------------------HHHHHHHHHhccCCEEEEE
Confidence 2356678899999998874
No 380
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=90.31 E-value=2.1 Score=39.15 Aligned_cols=95 Identities=15% Similarity=0.127 Sum_probs=56.6
Q ss_pred CCeEEEEcCCC-chhHHHHHHc-CC-eEEEEeCCHHHHHHHHhcCCcceEEEccCCCCC-----C-CCCCcccEEEECCc
Q 043626 52 PRLLLDIGCGS-GLSGETLSEN-GH-QWIGLDISQSMLNIALEREVEGDLLLGDMGQGL-----G-LRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGs-G~~~~~L~~~-g~-~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~-----~-~~~~~fD~Vis~~~ 122 (291)
+.+||=+|+|. |..+..+++. |. .|+++|.++.-++.+++.... .++..+- ..+ . .....+|+|+-...
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~-~vi~~~~-~~~~~~i~~~t~g~g~D~vid~~g 291 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGAD-HVIDPTK-ENFVEAVLDYTNGLGAKLFLEATG 291 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS-EEECTTT-SCHHHHHHHHTTTCCCSEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC-EEEcCCC-CCHHHHHHHHhCCCCCCEEEECCC
Confidence 67999999864 5566666654 76 999999999999998876432 1221110 110 0 11236999985422
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
-. ...+..++..+.++++++|++++.
T Consensus 292 ~~------------~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 292 VP------------QLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp CH------------HHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred Cc------------HHHHHHHHHHHHhccCCCcEEEEe
Confidence 11 011233334444555999999874
No 381
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=90.31 E-value=0.67 Score=41.46 Aligned_cols=88 Identities=14% Similarity=0.177 Sum_probs=57.7
Q ss_pred CCeEEEEcC--CCchhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC-C-----C-CCCCcccEEEECC
Q 043626 52 PRLLLDIGC--GSGLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG-L-----G-LRPGVVDGAISIS 121 (291)
Q Consensus 52 ~~~VLDiGc--GsG~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~-~-----~-~~~~~fD~Vis~~ 121 (291)
+.+||-+|+ |.|.....++. .|..|+++|.++..++.+++.... .++ |.... + . .....+|+||...
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~-~~~--d~~~~~~~~~~~~~~~~~~~d~vi~~~ 243 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGAD-ETV--NYTHPDWPKEVRRLTGGKGADKVVDHT 243 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS-EEE--ETTSTTHHHHHHHHTTTTCEEEEEESS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCC-EEE--cCCcccHHHHHHHHhCCCCceEEEECC
Confidence 679999998 44665555554 578999999999998888754322 122 32211 0 0 1124699999764
Q ss_pred chhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 122 AVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 122 ~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
. . ..+..+.++|+++|++++.
T Consensus 244 g-~-----------------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 244 G-A-----------------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp C-S-----------------SSHHHHHHHEEEEEEEEES
T ss_pred C-H-----------------HHHHHHHHhhccCCEEEEE
Confidence 3 1 1355678899999998863
No 382
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=90.29 E-value=1.4 Score=39.69 Aligned_cols=96 Identities=20% Similarity=0.106 Sum_probs=60.6
Q ss_pred HhCCCCCCCCCeEEEEcC--CCchhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCC---CC-CCCCCccc
Q 043626 43 LLALPDDGVPRLLLDIGC--GSGLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQ---GL-GLRPGVVD 115 (291)
Q Consensus 43 lL~~~~~~~~~~VLDiGc--GsG~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~---~~-~~~~~~fD 115 (291)
...+.+ +.+||-+|+ |.|.....++. .|..|+++|.++..++.+++.... .++..+-.+ .+ ......+|
T Consensus 158 ~~~~~~---g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~-~~~~~~~~~~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 158 LGGLSE---GKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCD-RPINYKTEPVGTVLKQEYPEGVD 233 (362)
T ss_dssp HTCCCT---TCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-EEEETTTSCHHHHHHHHCTTCEE
T ss_pred hcCCCC---CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCc-EEEecCChhHHHHHHHhcCCCCC
Confidence 334554 679999993 34666666665 478999999999988888764322 222211100 00 01124689
Q ss_pred EEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 116 GAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 116 ~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+||....- ..+..+.++|+++|++++.
T Consensus 234 ~vid~~g~------------------~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 234 VVYESVGG------------------AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp EEEECSCT------------------HHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCH------------------HHHHHHHHHHhcCCEEEEE
Confidence 99865321 3466788999999998864
No 383
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=90.21 E-value=1.1 Score=37.98 Aligned_cols=72 Identities=17% Similarity=0.144 Sum_probs=50.8
Q ss_pred CeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC----C-----CCCcccEEEEC
Q 043626 53 RLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLG----L-----RPGVVDGAISI 120 (291)
Q Consensus 53 ~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~----~-----~~~~fD~Vis~ 120 (291)
..||=.|++.|. +...|++.|..|+.+|.++..++..........++.+|+.+.-. + .-+..|++|.+
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n 82 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNN 82 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeEEeeCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 467888876653 44556677999999999998888777766667788999865211 0 01478999988
Q ss_pred Cchh
Q 043626 121 SAVQ 124 (291)
Q Consensus 121 ~~l~ 124 (291)
..+.
T Consensus 83 Ag~~ 86 (247)
T 3dii_A 83 ACRG 86 (247)
T ss_dssp CC-C
T ss_pred CCCC
Confidence 6543
No 384
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=90.14 E-value=0.5 Score=41.97 Aligned_cols=88 Identities=15% Similarity=0.161 Sum_probs=55.2
Q ss_pred eEEEEcC-C-CchhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEc-cC-CCCC-CCCCCcccEEEECCchhhhc
Q 043626 54 LLLDIGC-G-SGLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLG-DM-GQGL-GLRPGVVDGAISISAVQWLC 127 (291)
Q Consensus 54 ~VLDiGc-G-sG~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~-D~-~~~~-~~~~~~fD~Vis~~~l~~l~ 127 (291)
.||-+|| | .|.....++. .|..+++++.++.-++.+++.... .++.. +. ...+ ....+.+|+|+-...-
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~-~v~~~~~~~~~~~~~~~~~~~d~vid~~g~---- 227 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGAS-EVISREDVYDGTLKALSKQQWQGAVDPVGG---- 227 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCS-EEEEHHHHCSSCCCSSCCCCEEEEEESCCT----
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc-EEEECCCchHHHHHHhhcCCccEEEECCcH----
Confidence 7999998 3 3555555555 478899999998877877664322 12211 11 0111 1223469998854221
Q ss_pred cccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 128 NADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 128 ~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
..+....++|++||++++.
T Consensus 228 --------------~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 228 --------------KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp --------------HHHHHHHTTEEEEEEEEEC
T ss_pred --------------HHHHHHHHhhcCCCEEEEE
Confidence 2466788999999998864
No 385
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=89.88 E-value=0.72 Score=40.89 Aligned_cols=88 Identities=16% Similarity=0.084 Sum_probs=55.9
Q ss_pred CCeEEEEcCC--CchhHHHHH-HcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC-C-----C-CCCCcccEEEECC
Q 043626 52 PRLLLDIGCG--SGLSGETLS-ENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG-L-----G-LRPGVVDGAISIS 121 (291)
Q Consensus 52 ~~~VLDiGcG--sG~~~~~L~-~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~-~-----~-~~~~~fD~Vis~~ 121 (291)
+.+||-+|++ .|.....++ ..|..|+++|.++..++.+++.... .++ |..+. . . .....+|+||.+.
T Consensus 141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~-~~~--~~~~~~~~~~~~~~~~~~~~D~vi~~~ 217 (327)
T 1qor_A 141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAW-QVI--NYREEDLVERLKEITGGKKVRVVYDSV 217 (327)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS-EEE--ETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC-EEE--ECCCccHHHHHHHHhCCCCceEEEECC
Confidence 6799999943 344444444 3589999999999988888764322 122 22111 0 0 1123699999764
Q ss_pred chhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 122 AVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 122 ~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
.- ..+..+.++|+++|++++.
T Consensus 218 g~------------------~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 218 GR------------------DTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp CG------------------GGHHHHHHTEEEEEEEEEC
T ss_pred ch------------------HHHHHHHHHhcCCCEEEEE
Confidence 31 2356778999999998864
No 386
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.68 E-value=2.6 Score=31.56 Aligned_cols=94 Identities=18% Similarity=0.225 Sum_probs=53.6
Q ss_pred CCeEEEEcCCC-ch-hHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCC---CCCCCcccEEEECCchhhh
Q 043626 52 PRLLLDIGCGS-GL-SGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGL---GLRPGVVDGAISISAVQWL 126 (291)
Q Consensus 52 ~~~VLDiGcGs-G~-~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~---~~~~~~fD~Vis~~~l~~l 126 (291)
.++|+=+|||. |. ++..|.+.|+.++++|.++..++.+.... .+.++.+|....- ......+|+|+.......
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~-~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~- 81 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-DALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE- 81 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-SSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc-CcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCch-
Confidence 45788888754 22 23444556899999999998877665432 3456667753210 011346898886522111
Q ss_pred ccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 127 CNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 127 ~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
....+..+.+.+.++ .+++..
T Consensus 82 -------------~~~~~~~~~~~~~~~-~ii~~~ 102 (140)
T 1lss_A 82 -------------VNLMSSLLAKSYGIN-KTIARI 102 (140)
T ss_dssp -------------HHHHHHHHHHHTTCC-CEEEEC
T ss_pred -------------HHHHHHHHHHHcCCC-EEEEEe
Confidence 223444556667775 444433
No 387
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=89.60 E-value=1.1 Score=39.57 Aligned_cols=98 Identities=17% Similarity=0.087 Sum_probs=59.7
Q ss_pred HHHHHhCCCCCCCCCeEEEEc-CCC-chhHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC-CCCCCCcc
Q 043626 39 RALELLALPDDGVPRLLLDIG-CGS-GLSGETLSEN-GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG-LGLRPGVV 114 (291)
Q Consensus 39 ~~lelL~~~~~~~~~~VLDiG-cGs-G~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~-~~~~~~~f 114 (291)
.+++...+.+ +.+||=+| +|. |..+..+++. |.++++++ ++..++.+++.... .++..+- .. +.-.-..+
T Consensus 143 ~al~~~~~~~---g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~-~~i~~~~-~~~~~~~~~g~ 216 (321)
T 3tqh_A 143 QALNQAEVKQ---GDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAE-QCINYHE-EDFLLAISTPV 216 (321)
T ss_dssp HHHHHTTCCT---TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCS-EEEETTT-SCHHHHCCSCE
T ss_pred HHHHhcCCCC---CCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCC-EEEeCCC-cchhhhhccCC
Confidence 3445556655 77999986 554 6666666654 78999997 55557777765432 2222211 11 11111468
Q ss_pred cEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 115 DGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 115 D~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
|+|+-...- ..+....++|+++|++++.
T Consensus 217 D~v~d~~g~------------------~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 217 DAVIDLVGG------------------DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEEESSCH------------------HHHHHHGGGEEEEEEEEEC
T ss_pred CEEEECCCc------------------HHHHHHHHhccCCCEEEEe
Confidence 998854221 1236788999999998864
No 388
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=89.14 E-value=1.5 Score=38.83 Aligned_cols=55 Identities=22% Similarity=0.164 Sum_probs=39.6
Q ss_pred hHHHHHHHHHHHHHHhCC---CCCCCCCeEEEEcCCCchhHHHHHHc----C--CeEEEEeCCH
Q 043626 29 IIDIQAKLSERALELLAL---PDDGVPRLLLDIGCGSGLSGETLSEN----G--HQWIGLDISQ 83 (291)
Q Consensus 29 ~~~iq~~~~~~~lelL~~---~~~~~~~~VLDiGcGsG~~~~~L~~~----g--~~v~gvDis~ 83 (291)
..+.|..+.-.-++.|.. .....+..|+=+|||.|.....|+++ + ..|+++|..+
T Consensus 35 ~h~GQrKLLlsEIeFLt~~~~~~~~~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap 98 (307)
T 3mag_A 35 PYQGQLKLLLGELFFLSKLQRHGILDGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRH 98 (307)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTCSTTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSC
T ss_pred CChhHHHHHHHHHHHHHHHHhcCCCCCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCc
Confidence 566788877777777732 11111569999999999999888875 2 5888888744
No 389
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=88.91 E-value=0.94 Score=38.68 Aligned_cols=106 Identities=18% Similarity=0.099 Sum_probs=64.6
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcC-CcceEEEccCCCCCCC---------CCCcccEEE
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALERE-VEGDLLLGDMGQGLGL---------RPGVVDGAI 118 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~-~~~~~~~~D~~~~~~~---------~~~~fD~Vi 118 (291)
+..+|=.|++.|. +...|++.|.+|+.+|.++..++...+.. ..+.++.+|+.+.-.. .-+.+|++|
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv 87 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLH 87 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 5688888877664 44556677999999999998776665443 3467888898542110 124789999
Q ss_pred ECCchhhhccccccCCchHHHH-----------HHHHHHHHHhccCCcEEEEE
Q 043626 119 SISAVQWLCNADKASHEPRLRL-----------KAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 119 s~~~l~~l~~~~~~~~~p~~~l-----------~~~l~~l~~~LkpgG~lv~~ 160 (291)
.+..+....... ..+...+ ..+++.+...|+.+|.+++.
T Consensus 88 ~nAg~~~~~~~~---~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 88 INAGVSELEPFD---QVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp ECCCCCCCBCGG---GCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred ECCCCCCCCChh---hCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 876553321100 0111112 23344555666778888764
No 390
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=88.85 E-value=3.9 Score=37.86 Aligned_cols=93 Identities=13% Similarity=0.133 Sum_probs=60.6
Q ss_pred CCeEEEEcCCC-ch-hHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCC---CCCCCcccEEEECCchhhh
Q 043626 52 PRLLLDIGCGS-GL-SGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGL---GLRPGVVDGAISISAVQWL 126 (291)
Q Consensus 52 ~~~VLDiGcGs-G~-~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~---~~~~~~fD~Vis~~~l~~l 126 (291)
..+|+=+|||. |. ++..|.+.|+.|+++|.++..++.++.. ...++.+|....- ...-...|+||+...
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~--g~~vi~GDat~~~~L~~agi~~A~~viv~~~---- 77 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF--GMKVFYGDATRMDLLESAGAAKAEVLINAID---- 77 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT--TCCCEESCTTCHHHHHHTTTTTCSEEEECCS----
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC--CCeEEEcCCCCHHHHHhcCCCccCEEEECCC----
Confidence 45788888865 32 3344456689999999999999888754 3567888885521 112356888886421
Q ss_pred ccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 127 CNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 127 ~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+ +. ....+..+.+.+.|...++..
T Consensus 78 -~-------~~--~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 78 -D-------PQ--TNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp -S-------HH--HHHHHHHHHHHHCTTCEEEEE
T ss_pred -C-------hH--HHHHHHHHHHHhCCCCeEEEE
Confidence 1 11 234455667777888777773
No 391
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=88.77 E-value=1.3 Score=39.68 Aligned_cols=93 Identities=12% Similarity=0.028 Sum_probs=59.8
Q ss_pred HHhCCCCCCCCCeEEEEcC-C-CchhHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC------CCCC
Q 043626 42 ELLALPDDGVPRLLLDIGC-G-SGLSGETLSEN-GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLG------LRPG 112 (291)
Q Consensus 42 elL~~~~~~~~~~VLDiGc-G-sG~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~------~~~~ 112 (291)
+...+.+ +.+||-+|+ | .|..+..++.. |..|+++ .++.-++.+++.... .+. +- ..+. ....
T Consensus 144 ~~~~~~~---g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~--~i~-~~-~~~~~~~~~~~~~~ 215 (343)
T 3gaz_A 144 DRAQVQD---GQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGAT--PID-AS-REPEDYAAEHTAGQ 215 (343)
T ss_dssp TTTCCCT---TCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSE--EEE-TT-SCHHHHHHHHHTTS
T ss_pred HhcCCCC---CCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCC--Eec-cC-CCHHHHHHHHhcCC
Confidence 4444544 779999995 3 36666666654 7899999 889888888775433 232 21 1110 1124
Q ss_pred cccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 113 VVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 113 ~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
.+|+|+-...- ..+..+..+|+++|++++.
T Consensus 216 g~D~vid~~g~------------------~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 216 GFDLVYDTLGG------------------PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp CEEEEEESSCT------------------HHHHHHHHHEEEEEEEEES
T ss_pred CceEEEECCCc------------------HHHHHHHHHHhcCCeEEEE
Confidence 69998864221 3466788899999998864
No 392
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=88.72 E-value=2.5 Score=35.10 Aligned_cols=70 Identities=14% Similarity=0.222 Sum_probs=46.9
Q ss_pred CCeEEEEcCCCchhHHHH----HHcCCeEEEEeCCHHHHHHHHhcCCcc-eEEEccCCCCCCCCCCcccEEEECCchh
Q 043626 52 PRLLLDIGCGSGLSGETL----SENGHQWIGLDISQSMLNIALEREVEG-DLLLGDMGQGLGLRPGVVDGAISISAVQ 124 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L----~~~g~~v~gvDis~~ml~~a~~~~~~~-~~~~~D~~~~~~~~~~~fD~Vis~~~l~ 124 (291)
+.+||=.|+ +|.+|..+ ++.|++|++++-++..+...... .+ .++.+|+.+.+.-.-+.+|+||.+....
T Consensus 21 ~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 21 GMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER--GASDIVVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHT--TCSEEEECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred CCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhC--CCceEEEcccHHHHHHHHcCCCEEEECCCCC
Confidence 568998885 45555444 45689999999988766544332 46 7889998632322234789999876543
No 393
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=88.67 E-value=0.75 Score=39.66 Aligned_cols=41 Identities=7% Similarity=-0.007 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCC
Q 043626 140 LKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 140 l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~ 183 (291)
+..++..++++|+|||.+++.. .......+...+...||.-
T Consensus 53 ~~~~l~~~~~~Lk~~g~i~v~~---~d~~~~~~~~~~~~~gf~~ 93 (260)
T 1g60_A 53 TYRWIDKVLDKLDKDGSLYIFN---TPFNCAFICQYLVSKGMIF 93 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEE---CHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHhcCCeEEEEEc---CcHHHHHHHHHHHhhccce
Confidence 5677888899999999999886 3344556667788899853
No 394
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=88.56 E-value=0.23 Score=43.63 Aligned_cols=85 Identities=15% Similarity=0.131 Sum_probs=55.1
Q ss_pred CCeEEEEcC--CCchhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEc----cCCCCCCCCCCcccEEEECCchh
Q 043626 52 PRLLLDIGC--GSGLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLG----DMGQGLGLRPGVVDGAISISAVQ 124 (291)
Q Consensus 52 ~~~VLDiGc--GsG~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~----D~~~~~~~~~~~fD~Vis~~~l~ 124 (291)
+.+||-+|+ |.|..+..++. .|.+|+++|.++..++.+++.... .++.. |+.+.+ +.+|+|+. ..-
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~-~~~~~~~~~~~~~~~----~~~d~vid-~g~- 198 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAE-EAATYAEVPERAKAW----GGLDLVLE-VRG- 198 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCS-EEEEGGGHHHHHHHT----TSEEEEEE-CSC-
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCC-EEEECCcchhHHHHh----cCceEEEE-CCH-
Confidence 679999998 23555555554 478999999999888887654322 12221 110111 46899886 321
Q ss_pred hhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 125 WLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 125 ~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
..+..+.++|+++|++++.
T Consensus 199 -----------------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 199 -----------------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp -----------------TTHHHHHTTEEEEEEEEEC
T ss_pred -----------------HHHHHHHHhhccCCEEEEE
Confidence 1355678899999998863
No 395
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=88.55 E-value=2.2 Score=36.62 Aligned_cols=108 Identities=18% Similarity=0.103 Sum_probs=62.3
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCC------------HHHHHHHHh----cCCcceEEEccCCCCCCC---
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDIS------------QSMLNIALE----REVEGDLLLGDMGQGLGL--- 109 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis------------~~ml~~a~~----~~~~~~~~~~D~~~~~~~--- 109 (291)
+..||=.|++.|. +...|++.|..|+.+|.+ ...++.+.. ....+.++.+|+.+.-..
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 89 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRE 89 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 4578888887664 445666779999999987 554444332 234567888898652110
Q ss_pred ------CCCcccEEEECCchhhhccccccCCchHHH-------HHHHHHHHHHhccCCcEEEEE
Q 043626 110 ------RPGVVDGAISISAVQWLCNADKASHEPRLR-------LKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 110 ------~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~-------l~~~l~~l~~~LkpgG~lv~~ 160 (291)
.-+..|++|.+..+.... ........... ...+++.+...|+.+|.+++.
T Consensus 90 ~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 90 LANAVAEFGKLDVVVANAGICPLG-AHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCC-TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHcCCCCEEEECCCcCccc-CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 014789999886654321 11100111111 123445566667778888764
No 396
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=88.54 E-value=4 Score=36.16 Aligned_cols=105 Identities=16% Similarity=0.090 Sum_probs=64.5
Q ss_pred CeEEEEcCCC--chhHHHHHHcCC--eEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhcc
Q 043626 53 RLLLDIGCGS--GLSGETLSENGH--QWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCN 128 (291)
Q Consensus 53 ~~VLDiGcGs--G~~~~~L~~~g~--~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~ 128 (291)
.+|.=||+|. +.++..|...|+ .|+++|.++..++.+.+... ++-...|+.+. .-...|+||..-..+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~-~~~~~~~~~~~---~~~~aDvVilavp~~---- 105 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI-IDEGTTSIAKV---EDFSPDFVMLSSPVR---- 105 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS-CSEEESCTTGG---GGGCCSEEEECSCGG----
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCC-cchhcCCHHHH---hhccCCEEEEeCCHH----
Confidence 5899999875 335566677787 99999999998888765432 11223333210 123578888642222
Q ss_pred ccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHH
Q 043626 129 ADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAA 176 (291)
Q Consensus 129 ~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~ 176 (291)
....++..+...|++|..+ +.+........+.+...+
T Consensus 106 ----------~~~~vl~~l~~~l~~~~iv-~d~~Svk~~~~~~~~~~l 142 (314)
T 3ggo_A 106 ----------TFREIAKKLSYILSEDATV-TDQGSVKGKLVYDLENIL 142 (314)
T ss_dssp ----------GHHHHHHHHHHHSCTTCEE-EECCSCCTHHHHHHHHHH
T ss_pred ----------HHHHHHHHHhhccCCCcEE-EECCCCcHHHHHHHHHhc
Confidence 1557788888899888754 444333334444454443
No 397
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=88.26 E-value=0.64 Score=41.68 Aligned_cols=96 Identities=15% Similarity=0.078 Sum_probs=60.2
Q ss_pred HHhCCCCCCCCCeEEEEcCC--CchhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC---C-C-CCCCc
Q 043626 42 ELLALPDDGVPRLLLDIGCG--SGLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG---L-G-LRPGV 113 (291)
Q Consensus 42 elL~~~~~~~~~~VLDiGcG--sG~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~---~-~-~~~~~ 113 (291)
+...+.. +.+||-+|++ .|..+..++. .|..|++++.++..++.+++.... .++..+ ... + . .....
T Consensus 153 ~~~~~~~---g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~-~v~~~~-~~~~~~v~~~~~~~g 227 (342)
T 4eye_A 153 RRGQLRA---GETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGAD-IVLPLE-EGWAKAVREATGGAG 227 (342)
T ss_dssp TTSCCCT---TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCS-EEEESS-TTHHHHHHHHTTTSC
T ss_pred HhcCCCC---CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCc-EEecCc-hhHHHHHHHHhCCCC
Confidence 3334444 7799999973 3566655555 478999999999888888775432 222222 110 0 0 11236
Q ss_pred ccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 114 VDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 114 fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
+|+|+....- ..+..+.++|+++|++++.
T Consensus 228 ~Dvvid~~g~------------------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 228 VDMVVDPIGG------------------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp EEEEEESCC--------------------CHHHHHHTEEEEEEEEEC
T ss_pred ceEEEECCch------------------hHHHHHHHhhcCCCEEEEE
Confidence 9999865332 1355678899999999864
No 398
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=88.26 E-value=0.98 Score=40.64 Aligned_cols=88 Identities=16% Similarity=0.077 Sum_probs=55.1
Q ss_pred CCeEEEEcCC--CchhHHHHH-HcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC-C-----C-CCCCcccEEEECC
Q 043626 52 PRLLLDIGCG--SGLSGETLS-ENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG-L-----G-LRPGVVDGAISIS 121 (291)
Q Consensus 52 ~~~VLDiGcG--sG~~~~~L~-~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~-~-----~-~~~~~fD~Vis~~ 121 (291)
+..||-+|++ .|.....++ ..|..|+++|.++..++.+++.... ..+ |.... + . .....+|+||.+.
T Consensus 163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~-~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~~ 239 (354)
T 2j8z_A 163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAA-AGF--NYKKEDFSEATLKFTKGAGVNLILDCI 239 (354)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS-EEE--ETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCc-EEE--ecCChHHHHHHHHHhcCCCceEEEECC
Confidence 6799999853 344444444 4578999999999988888654322 122 22111 0 0 1124699998654
Q ss_pred chhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 122 AVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 122 ~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
.-. .+..+.++|+++|++++.
T Consensus 240 G~~------------------~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 240 GGS------------------YWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp CGG------------------GHHHHHHHEEEEEEEEEC
T ss_pred Cch------------------HHHHHHHhccCCCEEEEE
Confidence 321 245678899999998874
No 399
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=88.23 E-value=5.4 Score=34.82 Aligned_cols=117 Identities=16% Similarity=0.136 Sum_probs=69.3
Q ss_pred CCeEEEEcCCC-c-hhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccc
Q 043626 52 PRLLLDIGCGS-G-LSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNA 129 (291)
Q Consensus 52 ~~~VLDiGcGs-G-~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~ 129 (291)
..+|.=||+|. | .++..|++.|+.|+++|.++..++.+.+... .....+..+. -...|+||..-.-.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~--~~~~~~~~e~----~~~aDvvi~~vp~~----- 75 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGA--CGAAASAREF----AGVVDALVILVVNA----- 75 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC--SEEESSSTTT----TTTCSEEEECCSSH-----
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCC--ccccCCHHHH----HhcCCEEEEECCCH-----
Confidence 45788898876 3 2556667789999999999998887765422 2223444222 23568888642111
Q ss_pred cccCCchHHHHHHHH---HHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeCCC
Q 043626 130 DKASHEPRLRLKAFF---GSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPH 191 (291)
Q Consensus 130 ~~~~~~p~~~l~~~l---~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~p~ 191 (291)
.....++ ..+...|++|..++ ......+.....+...+...|. .+++.|-
T Consensus 76 --------~~~~~v~~~~~~l~~~l~~g~ivv-~~st~~~~~~~~~~~~~~~~g~---~~~~~pv 128 (303)
T 3g0o_A 76 --------AQVRQVLFGEDGVAHLMKPGSAVM-VSSTISSADAQEIAAALTALNL---NMLDAPV 128 (303)
T ss_dssp --------HHHHHHHC--CCCGGGSCTTCEEE-ECSCCCHHHHHHHHHHHHTTTC---EEEECCE
T ss_pred --------HHHHHHHhChhhHHhhCCCCCEEE-ecCCCCHHHHHHHHHHHHHcCC---eEEeCCC
Confidence 1134444 55667788776554 4444455556666666666543 3445543
No 400
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=88.07 E-value=3 Score=38.63 Aligned_cols=90 Identities=13% Similarity=0.035 Sum_probs=56.4
Q ss_pred CCeEEEEcC-C-CchhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEc--cCCCC------------------C-
Q 043626 52 PRLLLDIGC-G-SGLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLG--DMGQG------------------L- 107 (291)
Q Consensus 52 ~~~VLDiGc-G-sG~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~--D~~~~------------------~- 107 (291)
+.+||-+|+ | .|..+..++. .|..+++++.++.-++.+++.....-+-.. |.... +
T Consensus 221 g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 300 (447)
T 4a0s_A 221 GDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVV 300 (447)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHH
Confidence 679999997 3 2555555554 478999999999999988765432211111 11000 0
Q ss_pred CCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEE
Q 043626 108 GLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVF 159 (291)
Q Consensus 108 ~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~ 159 (291)
......+|+|+....- ..+.....+|++||++++
T Consensus 301 ~~~g~g~Dvvid~~G~------------------~~~~~~~~~l~~~G~iv~ 334 (447)
T 4a0s_A 301 EKAGREPDIVFEHTGR------------------VTFGLSVIVARRGGTVVT 334 (447)
T ss_dssp HHHSSCCSEEEECSCH------------------HHHHHHHHHSCTTCEEEE
T ss_pred HHhCCCceEEEECCCc------------------hHHHHHHHHHhcCCEEEE
Confidence 0002468999864321 245677889999999987
No 401
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=87.76 E-value=0.9 Score=34.79 Aligned_cols=67 Identities=16% Similarity=0.202 Sum_probs=45.1
Q ss_pred CCeEEEEcCCC-ch-hHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCC---CCCCCcccEEEEC
Q 043626 52 PRLLLDIGCGS-GL-SGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGL---GLRPGVVDGAISI 120 (291)
Q Consensus 52 ~~~VLDiGcGs-G~-~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~---~~~~~~fD~Vis~ 120 (291)
..+|+=+|||. |. +...|.+.|+.|+++|.++..++.+... ...++.+|..+.- ......+|+||..
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~--~~~~~~gd~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE--GFDAVIADPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT--TCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC--CCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence 34789999864 22 3344445689999999999988877654 3567888875421 1123468988864
No 402
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=87.73 E-value=2.1 Score=36.42 Aligned_cols=73 Identities=12% Similarity=0.186 Sum_probs=50.3
Q ss_pred CCeEEEEcC-CCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCCC---------CCCc
Q 043626 52 PRLLLDIGC-GSGL---SGETLSENGHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLGL---------RPGV 113 (291)
Q Consensus 52 ~~~VLDiGc-GsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~~---------~~~~ 113 (291)
+..||=.|+ |+|. +...|++.|+.|+.+|.+...++.+.+.. ..+.++.+|+.+.-.. ..+.
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 101 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGR 101 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCC
Confidence 457888887 5654 55667778999999999988766554432 3578888998652110 0146
Q ss_pred ccEEEECCchh
Q 043626 114 VDGAISISAVQ 124 (291)
Q Consensus 114 fD~Vis~~~l~ 124 (291)
+|++|.+..+.
T Consensus 102 id~li~~Ag~~ 112 (266)
T 3o38_A 102 LDVLVNNAGLG 112 (266)
T ss_dssp CCEEEECCCCC
T ss_pred CcEEEECCCcC
Confidence 89999886653
No 403
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=87.67 E-value=0.69 Score=41.18 Aligned_cols=88 Identities=13% Similarity=0.032 Sum_probs=56.0
Q ss_pred CCeEEEEcC--CCchhHHHHH-HcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC-C-----C-CCCCcccEEEECC
Q 043626 52 PRLLLDIGC--GSGLSGETLS-ENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG-L-----G-LRPGVVDGAISIS 121 (291)
Q Consensus 52 ~~~VLDiGc--GsG~~~~~L~-~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~-~-----~-~~~~~fD~Vis~~ 121 (291)
+.+||-+|+ |.|.....++ ..|..|+++|.++..++.+++.... ..+ |.... . . .....+|+||.+.
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~-~~~--d~~~~~~~~~i~~~~~~~~~d~vi~~~ 222 (333)
T 1wly_A 146 GDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCH-HTI--NYSTQDFAEVVREITGGKGVDVVYDSI 222 (333)
T ss_dssp TCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS-EEE--ETTTSCHHHHHHHHHTTCCEEEEEECS
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC-EEE--ECCCHHHHHHHHHHhCCCCCeEEEECC
Confidence 679999996 3455444444 4589999999999888888664322 122 32111 0 0 0123689998653
Q ss_pred chhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 122 AVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 122 ~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
.- ..+..+.++|+++|++++.
T Consensus 223 g~------------------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 223 GK------------------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp CT------------------TTHHHHHHTEEEEEEEEEC
T ss_pred cH------------------HHHHHHHHhhccCCEEEEE
Confidence 32 2356778999999998764
No 404
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=87.35 E-value=3.8 Score=35.02 Aligned_cols=73 Identities=18% Similarity=0.315 Sum_probs=48.9
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcC-CcceEEEccCCCCCC----C-----CCCcccEEE
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALERE-VEGDLLLGDMGQGLG----L-----RPGVVDGAI 118 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~-~~~~~~~~D~~~~~~----~-----~~~~fD~Vi 118 (291)
+..||=.|++.|. +...|++.|++|+.++.++..++.+.+.. ..+.++.+|+.+.-. + .-+.+|++|
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv 85 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVA 85 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 4578888876553 34555667999999999988777665543 346778889854211 0 014689999
Q ss_pred ECCchh
Q 043626 119 SISAVQ 124 (291)
Q Consensus 119 s~~~l~ 124 (291)
.+..+.
T Consensus 86 nnAg~~ 91 (263)
T 2a4k_A 86 HFAGVA 91 (263)
T ss_dssp EGGGGT
T ss_pred ECCCCC
Confidence 886653
No 405
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=86.85 E-value=1.9 Score=38.17 Aligned_cols=73 Identities=23% Similarity=0.150 Sum_probs=50.3
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcC----C--cceEEEccCCCCCCC---------CCCc
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALERE----V--EGDLLLGDMGQGLGL---------RPGV 113 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~----~--~~~~~~~D~~~~~~~---------~~~~ 113 (291)
+..||=.|+++|. +...|++.|..|++++.++..++.+.... . .+.++.+|+.+.-.+ ..+.
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGP 87 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCC
Confidence 4589989987764 44566677999999999998776654432 2 467888898652110 1257
Q ss_pred ccEEEECCchh
Q 043626 114 VDGAISISAVQ 124 (291)
Q Consensus 114 fD~Vis~~~l~ 124 (291)
+|++|.+..+.
T Consensus 88 id~lv~nAg~~ 98 (319)
T 3ioy_A 88 VSILCNNAGVN 98 (319)
T ss_dssp EEEEEECCCCC
T ss_pred CCEEEECCCcC
Confidence 89999886653
No 406
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=86.67 E-value=7.5 Score=32.16 Aligned_cols=73 Identities=21% Similarity=0.171 Sum_probs=48.1
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC----C-CCCcccEEEECCch
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLG----L-RPGVVDGAISISAV 123 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~----~-~~~~fD~Vis~~~l 123 (291)
+..||=.|++.|. +...|++.|++|++++.++..++...+....+.++.+|+.+.-. + ..+.+|+||.+..+
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~ 86 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAAL 86 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCcc
Confidence 4578888865443 33444567899999999987776555544456778888864210 1 12468999988664
Q ss_pred h
Q 043626 124 Q 124 (291)
Q Consensus 124 ~ 124 (291)
.
T Consensus 87 ~ 87 (244)
T 1cyd_A 87 V 87 (244)
T ss_dssp C
T ss_pred c
Confidence 3
No 407
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=86.49 E-value=12 Score=32.00 Aligned_cols=103 Identities=17% Similarity=0.087 Sum_probs=60.0
Q ss_pred eEEEEcCCC-c-hhHHHHHHcCC--eEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCC-cccEEEECCchhhhcc
Q 043626 54 LLLDIGCGS-G-LSGETLSENGH--QWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPG-VVDGAISISAVQWLCN 128 (291)
Q Consensus 54 ~VLDiGcGs-G-~~~~~L~~~g~--~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~-~fD~Vis~~~l~~l~~ 128 (291)
+|.=||+|. | .++..|...|+ .|+++|.++..++.+.+.... .....|..+. -. ..|+|+..-..
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~-~~~~~~~~~~----~~~~aDvVilavp~----- 72 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGII-DEGTTSIAKV----EDFSPDFVMLSSPV----- 72 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSC-SEEESCGGGG----GGTCCSEEEECSCH-----
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCc-ccccCCHHHH----hcCCCCEEEEcCCH-----
Confidence 677888876 3 24455566677 899999999888777643221 1112232111 13 57888864222
Q ss_pred ccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHH
Q 043626 129 ADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAA 176 (291)
Q Consensus 129 ~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~ 176 (291)
.....++..+...|+++..++. .........+.+.+.+
T Consensus 73 ---------~~~~~v~~~l~~~l~~~~iv~~-~~~~~~~~~~~l~~~l 110 (281)
T 2g5c_A 73 ---------RTFREIAKKLSYILSEDATVTD-QGSVKGKLVYDLENIL 110 (281)
T ss_dssp ---------HHHHHHHHHHHHHSCTTCEEEE-CCSCCTHHHHHHHHHH
T ss_pred ---------HHHHHHHHHHHhhCCCCcEEEE-CCCCcHHHHHHHHHhc
Confidence 2255777888888998875443 3222333444455544
No 408
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=86.47 E-value=0.74 Score=41.25 Aligned_cols=95 Identities=12% Similarity=0.003 Sum_probs=50.9
Q ss_pred eEE-EccCCCCC-CCCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCCh-----HHH
Q 043626 97 DLL-LGDMGQGL-GLRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESV-----AQR 169 (291)
Q Consensus 97 ~~~-~~D~~~~~-~~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~-----~~~ 169 (291)
.++ ++|..+.+ .++.++||+|++.....--.+.-.....-..-+..+|..++++|+|||.+++....... ..+
T Consensus 40 ~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~~~~~~~~l 119 (319)
T 1eg2_A 40 HVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQGEAGSGDL 119 (319)
T ss_dssp EEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCCCCCTTBCCH
T ss_pred eEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcccccccccccH
Confidence 455 66653322 23356888888764332110000000111122567888899999999999997654322 223
Q ss_pred HHHHHHHHHcC-CCC--cEEEeCCC
Q 043626 170 ELILGAAMRAG-FAG--GVVVDYPH 191 (291)
Q Consensus 170 ~~i~~~~~~aG-F~~--~~~~~~p~ 191 (291)
..+...+...| |.- .++...++
T Consensus 120 ~~l~~~i~~~G~~~~~~~IIW~K~~ 144 (319)
T 1eg2_A 120 ISIISHMRQNSKMLLANLIIWNYPN 144 (319)
T ss_dssp HHHHHHHHHHCCCEEEEEEEEECSC
T ss_pred HHHHHHHhCcccceeEEEEEEECCC
Confidence 45566666666 643 33444443
No 409
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=85.70 E-value=2.5 Score=39.39 Aligned_cols=88 Identities=16% Similarity=0.109 Sum_probs=57.4
Q ss_pred CCeEEEEcC-C-CchhHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC--------------------
Q 043626 52 PRLLLDIGC-G-SGLSGETLSEN-GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLG-------------------- 108 (291)
Q Consensus 52 ~~~VLDiGc-G-sG~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~-------------------- 108 (291)
+.+||=+|+ | .|..+..++.. |..+++++.++.-++.+++.... .++...- ..+.
T Consensus 229 g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~-~vi~~~~-~d~~~~~~~~~~~~~~~~~~~~~i 306 (456)
T 3krt_A 229 GDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAE-AIIDRNA-EGYRFWKDENTQDPKEWKRFGKRI 306 (456)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCC-EEEETTT-TTCCSEEETTEECHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCc-EEEecCc-CcccccccccccchHHHHHHHHHH
Confidence 679999997 3 36666666654 78999999999999988765432 1221110 0010
Q ss_pred ---CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEE
Q 043626 109 ---LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVF 159 (291)
Q Consensus 109 ---~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~ 159 (291)
.....+|+|+-...- ..+....++|++||++++
T Consensus 307 ~~~t~g~g~Dvvid~~G~------------------~~~~~~~~~l~~~G~iv~ 342 (456)
T 3krt_A 307 RELTGGEDIDIVFEHPGR------------------ETFGASVFVTRKGGTITT 342 (456)
T ss_dssp HHHHTSCCEEEEEECSCH------------------HHHHHHHHHEEEEEEEEE
T ss_pred HHHhCCCCCcEEEEcCCc------------------hhHHHHHHHhhCCcEEEE
Confidence 012478988854221 356678889999999987
No 410
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=85.63 E-value=0.55 Score=42.30 Aligned_cols=90 Identities=13% Similarity=0.007 Sum_probs=56.3
Q ss_pred CCeEEEEcC-C-CchhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC---C-CCCCCcccEEEECCchh
Q 043626 52 PRLLLDIGC-G-SGLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG---L-GLRPGVVDGAISISAVQ 124 (291)
Q Consensus 52 ~~~VLDiGc-G-sG~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~---~-~~~~~~fD~Vis~~~l~ 124 (291)
+.+||-+|+ | .|.....++. .|.+|+++|.++..++.+++.... .++..+-... + ....+.+|+|+....-
T Consensus 168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~- 245 (353)
T 4dup_A 168 GESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAK-RGINYRSEDFAAVIKAETGQGVDIILDMIGA- 245 (353)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS-EEEETTTSCHHHHHHHHHSSCEEEEEESCCG-
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC-EEEeCCchHHHHHHHHHhCCCceEEEECCCH-
Confidence 679999853 3 3555555554 488999999999999988775432 1222111000 0 0013469999865332
Q ss_pred hhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 125 WLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 125 ~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
..+..+..+|+++|++++.
T Consensus 246 -----------------~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 246 -----------------AYFERNIASLAKDGCLSII 264 (353)
T ss_dssp -----------------GGHHHHHHTEEEEEEEEEC
T ss_pred -----------------HHHHHHHHHhccCCEEEEE
Confidence 1355678899999998864
No 411
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=85.56 E-value=3.4 Score=35.66 Aligned_cols=74 Identities=18% Similarity=0.238 Sum_probs=50.9
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcC-CcceEEEccCCCCCC----C-----CCCcccEEE
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALERE-VEGDLLLGDMGQGLG----L-----RPGVVDGAI 118 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~-~~~~~~~~D~~~~~~----~-----~~~~fD~Vi 118 (291)
+..||=.|++.|. +...|++.|..|+.+|.++..++.+.+.. ..+.++.+|+.+.-. + .-+..|++|
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 108 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLV 108 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4578888877664 45566677999999999988776655443 456788889865211 0 114789999
Q ss_pred ECCchhh
Q 043626 119 SISAVQW 125 (291)
Q Consensus 119 s~~~l~~ 125 (291)
.+..+..
T Consensus 109 nnAg~~~ 115 (277)
T 3gvc_A 109 ANAGVVH 115 (277)
T ss_dssp ECCCCCC
T ss_pred ECCCCCC
Confidence 8866543
No 412
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=85.30 E-value=7.2 Score=33.09 Aligned_cols=64 Identities=20% Similarity=0.191 Sum_probs=46.4
Q ss_pred CeEEEEcCCCchhHHHHHH----cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCch
Q 043626 53 RLLLDIGCGSGLSGETLSE----NGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAV 123 (291)
Q Consensus 53 ~~VLDiGcGsG~~~~~L~~----~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l 123 (291)
.+||=.|| |.+|..+++ .|+.|++++-++........ ..+.++.+|+.+ +. ...+|+||.....
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~d-~~--~~~~d~vi~~a~~ 73 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--SGAEPLLWPGEE-PS--LDGVTHLLISTAP 73 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--TTEEEEESSSSC-CC--CTTCCEEEECCCC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--CCCeEEEecccc-cc--cCCCCEEEECCCc
Confidence 58999995 887776664 58999999998865544332 347889999855 33 4578999976554
No 413
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=85.27 E-value=4.8 Score=32.77 Aligned_cols=97 Identities=18% Similarity=0.165 Sum_probs=57.0
Q ss_pred eEEEEcCCCchhHHHHH----HcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccc
Q 043626 54 LLLDIGCGSGLSGETLS----ENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNA 129 (291)
Q Consensus 54 ~VLDiGcGsG~~~~~L~----~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~ 129 (291)
+||=.|+ +|.+|..++ +.|+.|++++-++..+.... ...+.++.+|+.+.-...-..+|+||.+....|-...
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~ 78 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL--GATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGR 78 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT--CTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSC
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEeccccccccc--CCCceEEecccccccHhhcccCCEEEECCccCCCcch
Confidence 5777775 565555544 56899999999987665432 2457888999854221112468999988766542211
Q ss_pred cccCCchHHHHHHHHHHHHHhccC-CcEEEEE
Q 043626 130 DKASHEPRLRLKAFFGSLYRCLAR-GARAVFQ 160 (291)
Q Consensus 130 ~~~~~~p~~~l~~~l~~l~~~Lkp-gG~lv~~ 160 (291)
. .........+...++. |+++++.
T Consensus 79 ------~-~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 79 ------G-YLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp ------T-HHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred ------h-hHHHHHHHHHHHHHHHcCCcEEEE
Confidence 1 1122334455555543 5666654
No 414
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=84.75 E-value=6.7 Score=33.51 Aligned_cols=99 Identities=21% Similarity=0.167 Sum_probs=59.0
Q ss_pred eEEEEcCCC-c-hhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccccc
Q 043626 54 LLLDIGCGS-G-LSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADK 131 (291)
Q Consensus 54 ~VLDiGcGs-G-~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~ 131 (291)
+|.=||||. | .++..|...|++|+++|.++..++.+.+.... .....|+.+ . ...|+||..-..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~---~--~~~D~vi~av~~-------- 67 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLV-DEAGQDLSL---L--QTAKIIFLCTPI-------- 67 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSC-SEEESCGGG---G--TTCSEEEECSCH--------
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCC-ccccCCHHH---h--CCCCEEEEECCH--------
Confidence 577788875 2 24455667789999999999888776543221 112223211 1 467988865222
Q ss_pred cCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHH
Q 043626 132 ASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELIL 173 (291)
Q Consensus 132 ~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~ 173 (291)
.....++..+...++++..+ +.+........+.+.
T Consensus 68 ------~~~~~~~~~l~~~~~~~~~v-v~~~~~~~~~~~~~~ 102 (279)
T 2f1k_A 68 ------QLILPTLEKLIPHLSPTAIV-TDVASVKTAIAEPAS 102 (279)
T ss_dssp ------HHHHHHHHHHGGGSCTTCEE-EECCSCCHHHHHHHH
T ss_pred ------HHHHHHHHHHHhhCCCCCEE-EECCCCcHHHHHHHH
Confidence 22567788888888887755 444333444444333
No 415
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=84.70 E-value=9.6 Score=35.14 Aligned_cols=131 Identities=11% Similarity=-0.086 Sum_probs=78.3
Q ss_pred CCeEEEEcCCCchhHHHHHHcC---Ce----EEEEeCCHHHHHHHHhcCCc-ceE-------------------------
Q 043626 52 PRLLLDIGCGSGLSGETLSENG---HQ----WIGLDISQSMLNIALEREVE-GDL------------------------- 98 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g---~~----v~gvDis~~ml~~a~~~~~~-~~~------------------------- 98 (291)
..+|||+.||.|.....|.+.| .. +.++|+++.++..-..++.. +.+
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~~~~~~~~~~~~~l~~~s~d~k~~~~~~~i 89 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSKNFNPKIERLDRDILSISNDSKMPISEYGI 89 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCSSCCCCCBCCCTTCCCCBSSSSSCCCHHHH
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCCCcccchhhhhhhhhhcccccccccccccc
Confidence 3589999999999999998877 23 78899999988877766543 110
Q ss_pred --------------------EEccCCCCCC-CCCCcccEEEECCchhhhcccccc-C-Cc---hHHH-HHHHHHHHHHh-
Q 043626 99 --------------------LLGDMGQGLG-LRPGVVDGAISISAVQWLCNADKA-S-HE---PRLR-LKAFFGSLYRC- 150 (291)
Q Consensus 99 --------------------~~~D~~~~~~-~~~~~fD~Vis~~~l~~l~~~~~~-~-~~---p~~~-l~~~l~~l~~~- 150 (291)
..+|+.+-.+ --++.+|+++..+.-|.+..+.+. . .+ ++.. +..++.-+..+
T Consensus 90 ~~l~~~~l~~i~~~~~~~~~~~~DI~~i~~~~ip~~vDll~ggpPCQ~fS~ag~~~g~~d~~~~r~~L~~~~~rii~~~~ 169 (403)
T 4dkj_A 90 KKINNTIKASYLNYAKKHFNNLFDIKKVNKDNFPKNIDIFTYSFPCQDLSVQGLQKGIDKELNTRSGLLWEIERILEEIK 169 (403)
T ss_dssp HHHTTBHHHHHHHHHHHHSCBCCCGGGCCTTTSCSSCSEEEECCCCTTTCTTSCCCCCCGGGCCSGGGHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHhhcccCCCcccchhhcCHhhCCCCCcEEEEeCCCCCHHHhCCCCCCCccccccchhHHHHHHHHHHhh
Confidence 2356533211 113467999988776665433221 1 11 2222 23333333331
Q ss_pred ------ccCCcEEEEE-EcC-C---ChHHHHHHHHHHHHcCCCC
Q 043626 151 ------LARGARAVFQ-IYP-E---SVAQRELILGAAMRAGFAG 183 (291)
Q Consensus 151 ------LkpgG~lv~~-~~~-~---~~~~~~~i~~~~~~aGF~~ 183 (291)
++|.- +++. +.. . .......+...+...||..
T Consensus 170 ~k~~~~~~Pk~-~l~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v 212 (403)
T 4dkj_A 170 NSFSKEEMPKY-LLMENVKNLLSHKNKKNYNTWLKQLEKFGYKS 212 (403)
T ss_dssp HHSCGGGSCSE-EEEEEEGGGGSHHHHHHHHHHHHHHHHTTEEE
T ss_pred hhhccccCCCE-EEEecchhhhhhccchHHHHHHHHHHhCCCeE
Confidence 67753 4443 321 1 1235678888999999875
No 416
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=84.52 E-value=4.8 Score=34.95 Aligned_cols=109 Identities=17% Similarity=0.164 Sum_probs=65.0
Q ss_pred CCeEEEEcCCC-c-hhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccc
Q 043626 52 PRLLLDIGCGS-G-LSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNA 129 (291)
Q Consensus 52 ~~~VLDiGcGs-G-~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~ 129 (291)
..+|.=||||. | .++..|++.|+.|+++|.++..++.+.+.. +. ...+..+. ....|+||..-.-
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g--~~-~~~~~~~~----~~~aDvvi~~vp~------ 69 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAG--AS-AARSARDA----VQGADVVISMLPA------ 69 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT--CE-ECSSHHHH----HTTCSEEEECCSC------
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCC--Ce-EcCCHHHH----HhCCCeEEEECCC------
Confidence 35788899986 3 355667778999999999998887776542 11 11121110 1246888864211
Q ss_pred cccCCchHHHHHHHHH---HHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCC
Q 043626 130 DKASHEPRLRLKAFFG---SLYRCLARGARAVFQIYPESVAQRELILGAAMRAGF 181 (291)
Q Consensus 130 ~~~~~~p~~~l~~~l~---~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF 181 (291)
| ..+..++. .+...+++|..+ +......+.....+...+.+.|.
T Consensus 70 ------~-~~~~~v~~~~~~~~~~l~~~~~v-i~~st~~~~~~~~l~~~~~~~g~ 116 (302)
T 2h78_A 70 ------S-QHVEGLYLDDDGLLAHIAPGTLV-LECSTIAPTSARKIHAAARERGL 116 (302)
T ss_dssp ------H-HHHHHHHHSSSCGGGSSCSSCEE-EECSCCCHHHHHHHHHHHHHTTC
T ss_pred ------H-HHHHHHHcCchhHHhcCCCCcEE-EECCCCCHHHHHHHHHHHHHcCC
Confidence 1 11445555 566677777654 44444455555667777766554
No 417
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=84.45 E-value=2.5 Score=36.98 Aligned_cols=73 Identities=19% Similarity=0.229 Sum_probs=50.6
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhc----CCcceEEEccCCCCCCC---------CCCccc
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALER----EVEGDLLLGDMGQGLGL---------RPGVVD 115 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~----~~~~~~~~~D~~~~~~~---------~~~~fD 115 (291)
+..||=.|+++|. +...|++.|..|++++.++..++.+.+. ...+.++.+|+.+.-.. ..+.+|
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 110 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVD 110 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 5689988887664 4455667799999999999877665443 23567888998652110 014789
Q ss_pred EEEECCchh
Q 043626 116 GAISISAVQ 124 (291)
Q Consensus 116 ~Vis~~~l~ 124 (291)
++|.+..+.
T Consensus 111 ~lvnnAg~~ 119 (301)
T 3tjr_A 111 VVFSNAGIV 119 (301)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCcC
Confidence 999886654
No 418
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=84.34 E-value=2.3 Score=38.34 Aligned_cols=87 Identities=17% Similarity=0.134 Sum_probs=54.4
Q ss_pred CCeEEEEcCCC-chhHHHHHH-cCCeEEEEeCCH---HHHHHHHhcCCcceEEEccCCCCCC--C--CCCcccEEEECCc
Q 043626 52 PRLLLDIGCGS-GLSGETLSE-NGHQWIGLDISQ---SMLNIALEREVEGDLLLGDMGQGLG--L--RPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGs-G~~~~~L~~-~g~~v~gvDis~---~ml~~a~~~~~~~~~~~~D~~~~~~--~--~~~~fD~Vis~~~ 122 (291)
+.+||-+|+|. |.....++. .|..|+++|.++ ..++.+++.. .+.+ | .+.+. . ..+.+|+||....
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~g--a~~v--~-~~~~~~~~~~~~~~~d~vid~~g 255 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETK--TNYY--N-SSNGYDKLKDSVGKFDVIIDATG 255 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHT--CEEE--E-CTTCSHHHHHHHCCEEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhC--Ccee--c-hHHHHHHHHHhCCCCCEEEECCC
Confidence 45899999832 334444443 478999999998 7777776543 2333 3 22110 0 0146899986533
Q ss_pred hhhhccccccCCchHHHHHHHH-HHHHHhccCCcEEEEE
Q 043626 123 VQWLCNADKASHEPRLRLKAFF-GSLYRCLARGARAVFQ 160 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l-~~l~~~LkpgG~lv~~ 160 (291)
.. ..+ ..+.++|+++|++++.
T Consensus 256 ~~-----------------~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 256 AD-----------------VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp CC-----------------THHHHHHGGGEEEEEEEEEC
T ss_pred Ch-----------------HHHHHHHHHHHhcCCEEEEE
Confidence 21 234 6788999999998864
No 419
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=84.32 E-value=5.7 Score=34.34 Aligned_cols=93 Identities=15% Similarity=0.234 Sum_probs=55.0
Q ss_pred CeEEEEcCCC-c-hhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceE----EEccCC--C--CCCCCCCcccEEEECCc
Q 043626 53 RLLLDIGCGS-G-LSGETLSENGHQWIGLDISQSMLNIALEREVEGDL----LLGDMG--Q--GLGLRPGVVDGAISISA 122 (291)
Q Consensus 53 ~~VLDiGcGs-G-~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~----~~~D~~--~--~~~~~~~~fD~Vis~~~ 122 (291)
++|.=||+|. | .++..|++.|++|+++|.++..++...+....... ....+. . .+.-.-..+|+||..-.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 4788899875 3 24556667789999999999887776654211100 000010 0 01000126798886422
Q ss_pred hhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEE
Q 043626 123 VQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVF 159 (291)
Q Consensus 123 l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~ 159 (291)
. .....++..+...|+++..++.
T Consensus 84 ~--------------~~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 84 A--------------QQLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp H--------------HHHHHHHHHHGGGCCTTCEEEE
T ss_pred c--------------ccHHHHHHHHHHhcCCCCEEEE
Confidence 2 2256778888888888776554
No 420
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=84.25 E-value=3.2 Score=37.62 Aligned_cols=111 Identities=11% Similarity=0.027 Sum_probs=67.1
Q ss_pred CCeEEEEcCCC-c-hhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccc
Q 043626 52 PRLLLDIGCGS-G-LSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNA 129 (291)
Q Consensus 52 ~~~VLDiGcGs-G-~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~ 129 (291)
..+|.=||+|. | .++..|++.|+.|+++|.++..++.+.+.... ...++.+.+. .....|+||..-...
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~---~~~s~~e~~~-~a~~~DvVi~~vp~~----- 92 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIA---GARSIEEFCA-KLVKPRVVWLMVPAA----- 92 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCB---CCSSHHHHHH-HSCSSCEEEECSCGG-----
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCE---EeCCHHHHHh-cCCCCCEEEEeCCHH-----
Confidence 45888999875 2 24566667899999999999888776654211 0111100000 012348888642221
Q ss_pred cccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCC
Q 043626 130 DKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGF 181 (291)
Q Consensus 130 ~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF 181 (291)
....++..+...|++|.. ++......+.....+...+...|.
T Consensus 93 ---------~v~~vl~~l~~~l~~g~i-iId~st~~~~~~~~~~~~l~~~g~ 134 (358)
T 4e21_A 93 ---------VVDSMLQRMTPLLAANDI-VIDGGNSHYQDDIRRADQMRAQGI 134 (358)
T ss_dssp ---------GHHHHHHHHGGGCCTTCE-EEECSSCCHHHHHHHHHHHHTTTC
T ss_pred ---------HHHHHHHHHHhhCCCCCE-EEeCCCCChHHHHHHHHHHHHCCC
Confidence 156777888888888765 445544555566666677766664
No 421
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=84.25 E-value=3 Score=35.41 Aligned_cols=109 Identities=16% Similarity=0.137 Sum_probs=62.1
Q ss_pred CCeEEEEcCC--Cch---hHHHHHHcCCeEEEEeCCHHHHHHHHh---cCC--cceEEEccCCCCCCC---------CCC
Q 043626 52 PRLLLDIGCG--SGL---SGETLSENGHQWIGLDISQSMLNIALE---REV--EGDLLLGDMGQGLGL---------RPG 112 (291)
Q Consensus 52 ~~~VLDiGcG--sG~---~~~~L~~~g~~v~gvDis~~ml~~a~~---~~~--~~~~~~~D~~~~~~~---------~~~ 112 (291)
+..||=.|++ +|. +...|++.|..|+.++.+....+.+.+ ... .+.++.+|+.+.-.. ..+
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVG 86 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 5688888876 443 456667789999999887643333322 221 478889998653211 014
Q ss_pred cccEEEECCchhhhcc-ccccCCchHHHH-----------HHHHHHHHHhccCCcEEEEE
Q 043626 113 VVDGAISISAVQWLCN-ADKASHEPRLRL-----------KAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 113 ~fD~Vis~~~l~~l~~-~~~~~~~p~~~l-----------~~~l~~l~~~LkpgG~lv~~ 160 (291)
.+|++|.+..+.+... .......+...+ ..+++.+...|+++|.+++.
T Consensus 87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 146 (266)
T 3oig_A 87 VIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTL 146 (266)
T ss_dssp CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEE
T ss_pred CeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEE
Confidence 7899998765543100 000001111112 23455666677788888874
No 422
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=84.20 E-value=5.7 Score=33.16 Aligned_cols=73 Identities=12% Similarity=0.064 Sum_probs=49.0
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcC-CcceEEEccCCCCCC-----CCCCcccEEEECCc
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALERE-VEGDLLLGDMGQGLG-----LRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~-~~~~~~~~D~~~~~~-----~~~~~fD~Vis~~~ 122 (291)
+.+||=.|++.|. +...|++.|+.|+.++.++..++...+.. ..+.++.+|+.+.-. -..+..|++|.+..
T Consensus 14 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~Ag 93 (249)
T 3f9i_A 14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCNAG 93 (249)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEECCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 5688888876653 44555667999999999998777665443 346778888854210 11257899998866
Q ss_pred hh
Q 043626 123 VQ 124 (291)
Q Consensus 123 l~ 124 (291)
+.
T Consensus 94 ~~ 95 (249)
T 3f9i_A 94 IT 95 (249)
T ss_dssp --
T ss_pred CC
Confidence 54
No 423
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=84.17 E-value=6.9 Score=34.53 Aligned_cols=117 Identities=14% Similarity=0.089 Sum_probs=70.1
Q ss_pred CCeEEEEcCCC-ch-hHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccc
Q 043626 52 PRLLLDIGCGS-GL-SGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNA 129 (291)
Q Consensus 52 ~~~VLDiGcGs-G~-~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~ 129 (291)
..+|.=||+|. |. ++..|++.|+.|+++|.++..++.+.+.. +. ...+..+. ....|+||..-.-
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g--~~-~~~~~~e~----~~~aDvVi~~vp~------ 97 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALG--AT-IHEQARAA----ARDADIVVSMLEN------ 97 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTT--CE-EESSHHHH----HTTCSEEEECCSS------
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCC--CE-eeCCHHHH----HhcCCEEEEECCC------
Confidence 56899999986 33 55667778999999999998877766542 21 22222111 1245888854211
Q ss_pred cccCCchHHHHHHHHH--HHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeCCCC
Q 043626 130 DKASHEPRLRLKAFFG--SLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHS 192 (291)
Q Consensus 130 ~~~~~~p~~~l~~~l~--~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~p~~ 192 (291)
...+..++. .+...|++|..+ +......+.....+...+...|. .+++.|.+
T Consensus 98 -------~~~~~~v~~~~~~~~~l~~~~~v-i~~st~~~~~~~~~~~~~~~~g~---~~~~~pv~ 151 (320)
T 4dll_A 98 -------GAVVQDVLFAQGVAAAMKPGSLF-LDMASITPREARDHAARLGALGI---AHLDTPVS 151 (320)
T ss_dssp -------HHHHHHHHTTTCHHHHCCTTCEE-EECSCCCHHHHHHHHHHHHHTTC---EEEECCEE
T ss_pred -------HHHHHHHHcchhHHhhCCCCCEE-EecCCCCHHHHHHHHHHHHHcCC---EEEeCCCc
Confidence 112445555 566778777654 44444456666677777776653 34555543
No 424
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=84.06 E-value=4.2 Score=35.15 Aligned_cols=107 Identities=13% Similarity=0.063 Sum_probs=63.4
Q ss_pred CeEEEEcCCC-ch-hHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhcccc
Q 043626 53 RLLLDIGCGS-GL-SGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNAD 130 (291)
Q Consensus 53 ~~VLDiGcGs-G~-~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~ 130 (291)
.+|.=||||. |. ++..|...|+.|+++|.++..++.+.+.. +. ...+..+. -...|+|+..-...
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g--~~-~~~~~~~~----~~~~D~vi~~v~~~------ 72 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAG--AE-TASTAKAI----AEQCDVIITMLPNS------ 72 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT--CE-ECSSHHHH----HHHCSEEEECCSSH------
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCC--Ce-ecCCHHHH----HhCCCEEEEECCCH------
Confidence 4788999986 32 45566677899999999998877766541 11 11111010 12468888652211
Q ss_pred ccCCchHHHHHHHH---HHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcC
Q 043626 131 KASHEPRLRLKAFF---GSLYRCLARGARAVFQIYPESVAQRELILGAAMRAG 180 (291)
Q Consensus 131 ~~~~~p~~~l~~~l---~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aG 180 (291)
..+..++ ..+...|++|..+ +.+....+...+.+.+.+...|
T Consensus 73 -------~~~~~~~~~~~~l~~~l~~~~~v-v~~s~~~~~~~~~l~~~~~~~g 117 (299)
T 1vpd_A 73 -------PHVKEVALGENGIIEGAKPGTVL-IDMSSIAPLASREISDALKAKG 117 (299)
T ss_dssp -------HHHHHHHHSTTCHHHHCCTTCEE-EECSCCCHHHHHHHHHHHHTTT
T ss_pred -------HHHHHHHhCcchHhhcCCCCCEE-EECCCCCHHHHHHHHHHHHHcC
Confidence 1134555 5677788888755 4444444444566777666554
No 425
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=83.95 E-value=2.1 Score=36.50 Aligned_cols=72 Identities=17% Similarity=0.109 Sum_probs=45.8
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCCCC---------CCCc
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGLGL---------RPGV 113 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~~~---------~~~~ 113 (291)
+..||=.|++.|. +...|++.|+.|++++.++..++.+.... ..+.++.+|+.+.-.. ..+.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR 86 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 4578888876553 34555667999999999987665433221 2356788898542110 0146
Q ss_pred ccEEEECCch
Q 043626 114 VDGAISISAV 123 (291)
Q Consensus 114 fD~Vis~~~l 123 (291)
+|++|.+..+
T Consensus 87 id~lv~~Ag~ 96 (267)
T 2gdz_A 87 LDILVNNAGV 96 (267)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 7999987654
No 426
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=83.83 E-value=3.8 Score=34.87 Aligned_cols=73 Identities=16% Similarity=0.018 Sum_probs=49.5
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCCC----C-----CCCc
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGLG----L-----RPGV 113 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~~----~-----~~~~ 113 (291)
+..+|=.|++.|. +...|++.|..|+.+|.++..++.+.+.. ..+.++.+|+.+.-. + .-+.
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 87 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGC 87 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4588888887764 44566677999999999988766554432 126778889865211 0 1247
Q ss_pred ccEEEECCchh
Q 043626 114 VDGAISISAVQ 124 (291)
Q Consensus 114 fD~Vis~~~l~ 124 (291)
.|++|.+..+.
T Consensus 88 id~lvnnAg~~ 98 (265)
T 3lf2_A 88 ASILVNNAGQG 98 (265)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999886654
No 427
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=83.74 E-value=11 Score=31.06 Aligned_cols=71 Identities=14% Similarity=0.076 Sum_probs=48.1
Q ss_pred eEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcC-CcceEEEccCCCCC------CCCCCcccEEEECCch
Q 043626 54 LLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALERE-VEGDLLLGDMGQGL------GLRPGVVDGAISISAV 123 (291)
Q Consensus 54 ~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~-~~~~~~~~D~~~~~------~~~~~~fD~Vis~~~l 123 (291)
.||=.|++.|. +...|++.|..|+.++.++..++.+.... ..+.++..|+.+.- .--...+|++|.+..+
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag~ 82 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAGS 82 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCCC
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCCc
Confidence 57777876654 44555667999999999998887766554 34678888986521 1112345999987664
Q ss_pred h
Q 043626 124 Q 124 (291)
Q Consensus 124 ~ 124 (291)
.
T Consensus 83 ~ 83 (230)
T 3guy_A 83 G 83 (230)
T ss_dssp C
T ss_pred C
Confidence 3
No 428
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=82.79 E-value=2.8 Score=36.59 Aligned_cols=106 Identities=13% Similarity=0.101 Sum_probs=67.3
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcC-CcceEEEccCCCCCC---------CCCCcccEEE
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALERE-VEGDLLLGDMGQGLG---------LRPGVVDGAI 118 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~-~~~~~~~~D~~~~~~---------~~~~~fD~Vi 118 (291)
+..+|=-|+++|. ....|++.|..|+.+|.+++.++.+.+.. ..+..+.+|+.+.-. -.-+..|++|
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV 108 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLF 108 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEE
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 5678888887775 55667778999999999999887765543 346778889865211 1126789999
Q ss_pred ECCchhhhccccccCCchHHHH-----------HHHHHHHHHhccCCcEEEEE
Q 043626 119 SISAVQWLCNADKASHEPRLRL-----------KAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 119 s~~~l~~l~~~~~~~~~p~~~l-----------~~~l~~l~~~LkpgG~lv~~ 160 (291)
.+......... ..-+...+ -.+.+.+...|+.+|.++..
T Consensus 109 NNAG~~~~~~~---~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIni 158 (273)
T 4fgs_A 109 VNAGGGSMLPL---GEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLT 158 (273)
T ss_dssp ECCCCCCCCCT---TSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred ECCCCCCCCCh---hhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEE
Confidence 88665432111 11122222 23344556677788887764
No 429
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=82.77 E-value=5.6 Score=33.92 Aligned_cols=106 Identities=19% Similarity=0.162 Sum_probs=61.5
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCC-HHHHHHHHh----cCCcceEEEccCCCCCC----C-----CCCcc
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDIS-QSMLNIALE----REVEGDLLLGDMGQGLG----L-----RPGVV 114 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis-~~ml~~a~~----~~~~~~~~~~D~~~~~~----~-----~~~~f 114 (291)
+..+|=.|++.|. +...|++.|..|+.++.. ...++...+ ....+.++.+|+.+.-. + ..+..
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 97 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHL 97 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5678888877664 445566779999988763 443333322 23456788899865211 0 01468
Q ss_pred cEEEECCchhhhccccccCCchHHHH-----------HHHHHHHHHhccCCcEEEEE
Q 043626 115 DGAISISAVQWLCNADKASHEPRLRL-----------KAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 115 D~Vis~~~l~~l~~~~~~~~~p~~~l-----------~~~l~~l~~~LkpgG~lv~~ 160 (291)
|++|.+..+....... ..+...+ ..+.+.+...|+++|.+++.
T Consensus 98 d~lvnnAg~~~~~~~~---~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 151 (270)
T 3is3_A 98 DIAVSNSGVVSFGHLK---DVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLT 151 (270)
T ss_dssp CEEECCCCCCCCCCGG---GCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CEEEECCCCCCCCCcc---cCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 9999876553321100 0011111 33456677778889988874
No 430
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=82.75 E-value=5.3 Score=33.77 Aligned_cols=73 Identities=16% Similarity=0.093 Sum_probs=49.8
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcC-CcceEEEccCCCCCC----C-----CCCcccEEE
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALERE-VEGDLLLGDMGQGLG----L-----RPGVVDGAI 118 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~-~~~~~~~~D~~~~~~----~-----~~~~fD~Vi 118 (291)
+..||=.|++.|. +...|++.|++|+.+|.+...++...... ..+.++.+|+.+.-. + ..+.+|++|
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 87 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILV 87 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4578888876653 44556677999999999988776655433 346788889865211 0 124789999
Q ss_pred ECCchh
Q 043626 119 SISAVQ 124 (291)
Q Consensus 119 s~~~l~ 124 (291)
.+..+.
T Consensus 88 ~~Ag~~ 93 (259)
T 4e6p_A 88 NNAALF 93 (259)
T ss_dssp ECCCCC
T ss_pred ECCCcC
Confidence 886653
No 431
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=82.62 E-value=3.2 Score=38.82 Aligned_cols=69 Identities=17% Similarity=0.304 Sum_probs=42.5
Q ss_pred ccccccchhHHHHH-HHHHHHHHHhCCCCCCCCCeEEEEcCCCchhHHHHHH----cC---CeEEEEeCCHHHHHHHHhc
Q 043626 21 RKYTSSSRIIDIQA-KLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSE----NG---HQWIGLDISQSMLNIALER 92 (291)
Q Consensus 21 ~~Y~~~~~~~~iq~-~~~~~~lelL~~~~~~~~~~VLDiGcGsG~~~~~L~~----~g---~~v~gvDis~~ml~~a~~~ 92 (291)
-.|.+++.+..+.. .+...+++.+.... +..|+|+|+|+|.+..-+.. .+ .+++.||+|+.+.+.-+++
T Consensus 109 GDFiTAPeiS~~FGe~la~~~~~~~~~~g---~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~ 185 (432)
T 4f3n_A 109 SDFVTAPELSPLFAQTLARPVAQALDASG---TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRET 185 (432)
T ss_dssp -CCSSCGGGHHHHHHHHHHHHHHHHHHHT---CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHH
T ss_pred CCccCchhhhHHHHHHHHHHHHHHHHhcC---CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHH
Confidence 34555555555432 23334444433222 45999999999998766653 22 4799999999876554443
No 432
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=82.57 E-value=3.7 Score=35.75 Aligned_cols=107 Identities=10% Similarity=-0.025 Sum_probs=63.0
Q ss_pred CCeEEEEcCCCc--h---hHHHHHHcCCeEEEEeCCHHHHHHHHh---cCCcceEEEccCCCCCC----C-----CCCcc
Q 043626 52 PRLLLDIGCGSG--L---SGETLSENGHQWIGLDISQSMLNIALE---REVEGDLLLGDMGQGLG----L-----RPGVV 114 (291)
Q Consensus 52 ~~~VLDiGcGsG--~---~~~~L~~~g~~v~gvDis~~ml~~a~~---~~~~~~~~~~D~~~~~~----~-----~~~~f 114 (291)
+..||=.|+++| . +...|++.|..|+.++.++...+.+.+ ....+.++.+|+.+.-. + .-+.+
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 110 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKL 110 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 568898997643 2 456667789999999998754433332 22346788889865211 0 12578
Q ss_pred cEEEECCchhhh---ccccccCCchHHH-----------HHHHHHHHHHhccCCcEEEEE
Q 043626 115 DGAISISAVQWL---CNADKASHEPRLR-----------LKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 115 D~Vis~~~l~~l---~~~~~~~~~p~~~-----------l~~~l~~l~~~LkpgG~lv~~ 160 (291)
|++|.+..+... ... ....+... ...+++.+...|+.+|++++.
T Consensus 111 D~lVnnAG~~~~~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~i 168 (293)
T 3grk_A 111 DFLVHAIGFSDKDELTGR--YIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTL 168 (293)
T ss_dssp SEEEECCCCCCHHHHTSC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CEEEECCccCCccccccc--ccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEE
Confidence 999988665421 000 00011111 133455666777788988874
No 433
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=82.43 E-value=6.7 Score=33.11 Aligned_cols=73 Identities=16% Similarity=0.123 Sum_probs=47.5
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhc----CCcceEEEccCCCCCC----CC-----C-Ccc
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALER----EVEGDLLLGDMGQGLG----LR-----P-GVV 114 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~----~~~~~~~~~D~~~~~~----~~-----~-~~f 114 (291)
+..||=.|++.|. +...|++.|++|++++.++..++.+.+. ...+.++.+|+.+.-. +. - +.+
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i 88 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKL 88 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4578888876553 3445556799999999998766554332 2346778889855211 00 1 678
Q ss_pred cEEEECCchh
Q 043626 115 DGAISISAVQ 124 (291)
Q Consensus 115 D~Vis~~~l~ 124 (291)
|++|.+..+.
T Consensus 89 d~lv~~Ag~~ 98 (260)
T 2ae2_A 89 NILVNNAGIV 98 (260)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999886643
No 434
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=82.25 E-value=8.3 Score=33.12 Aligned_cols=73 Identities=19% Similarity=0.116 Sum_probs=47.5
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhc-----CCcceEEEccCCCCCC---------CCCCcc
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALER-----EVEGDLLLGDMGQGLG---------LRPGVV 114 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~-----~~~~~~~~~D~~~~~~---------~~~~~f 114 (291)
+..||=.|++.|. +...|++.|++|++++.++..++...+. ...+.++.+|+.+.-. -..+.+
T Consensus 26 ~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 105 (302)
T 1w6u_A 26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHP 105 (302)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence 4578888876543 3344556789999999998766544332 3457788899864210 012467
Q ss_pred cEEEECCchh
Q 043626 115 DGAISISAVQ 124 (291)
Q Consensus 115 D~Vis~~~l~ 124 (291)
|++|.+..+.
T Consensus 106 d~li~~Ag~~ 115 (302)
T 1w6u_A 106 NIVINNAAGN 115 (302)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999886643
No 435
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=81.84 E-value=7.7 Score=33.43 Aligned_cols=84 Identities=11% Similarity=0.077 Sum_probs=53.3
Q ss_pred CeEEEEcC-CC-c-hhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccc
Q 043626 53 RLLLDIGC-GS-G-LSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNA 129 (291)
Q Consensus 53 ~~VLDiGc-Gs-G-~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~ 129 (291)
.+|.=||| |. | .++..|...|++|+++|.++..++.+.+.. +.. .+..+ .....|+||..-..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g--~~~--~~~~~----~~~~aDvVi~av~~------ 77 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMG--IPL--TDGDG----WIDEADVVVLALPD------ 77 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTT--CCC--CCSSG----GGGTCSEEEECSCH------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcC--CCc--CCHHH----HhcCCCEEEEcCCc------
Confidence 47999998 75 3 345666677899999999998877766521 211 12111 12357988864222
Q ss_pred cccCCchHHHHHHHHHHHHHhccCCcEEE
Q 043626 130 DKASHEPRLRLKAFFGSLYRCLARGARAV 158 (291)
Q Consensus 130 ~~~~~~p~~~l~~~l~~l~~~LkpgG~lv 158 (291)
..+..++..+...|++|..++
T Consensus 78 --------~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 78 --------NIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp --------HHHHHHHHHHGGGSCTTCEEE
T ss_pred --------hHHHHHHHHHHHhCCCCCEEE
Confidence 225677778877888776444
No 436
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=81.49 E-value=5.4 Score=34.22 Aligned_cols=106 Identities=16% Similarity=0.136 Sum_probs=58.2
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHH-HHHH----HhcCCcceEEEccCCCCCC----C-----CCCcc
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSM-LNIA----LEREVEGDLLLGDMGQGLG----L-----RPGVV 114 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~m-l~~a----~~~~~~~~~~~~D~~~~~~----~-----~~~~f 114 (291)
+..||=.|++.|. +...|++.|++|++++.+... ++.+ ......+.++.+|+.+.-. + .-+.+
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 108 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKL 108 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4578877776553 334455678999999887532 2222 2223346778888854211 0 01468
Q ss_pred cEEEECCchhhhccccccCCchHHHH-----------HHHHHHHHHhccCCcEEEEE
Q 043626 115 DGAISISAVQWLCNADKASHEPRLRL-----------KAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 115 D~Vis~~~l~~l~~~~~~~~~p~~~l-----------~~~l~~l~~~LkpgG~lv~~ 160 (291)
|++|.+..+....... ..+...+ ..+++.+...|+.+|++++.
T Consensus 109 D~lv~~Ag~~~~~~~~---~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 162 (283)
T 1g0o_A 109 DIVCSNSGVVSFGHVK---DVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM 162 (283)
T ss_dssp CEEEECCCCCCCCCGG---GCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CEEEECCCcCCCCCcc---cCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 9999886543211000 0011112 23445666667777888874
No 437
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=81.40 E-value=3.2 Score=34.98 Aligned_cols=71 Identities=11% Similarity=0.017 Sum_probs=45.0
Q ss_pred CCeEEEEcCCCchhHH----HHHH-cCCeEEEEeCCHHHHHHHHhc----CCcceEEEccCCCCCCC---------CCCc
Q 043626 52 PRLLLDIGCGSGLSGE----TLSE-NGHQWIGLDISQSMLNIALER----EVEGDLLLGDMGQGLGL---------RPGV 113 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~----~L~~-~g~~v~gvDis~~ml~~a~~~----~~~~~~~~~D~~~~~~~---------~~~~ 113 (291)
+..||=.|++ |.+|. .|++ .|+.|++++.++..++.+.+. ...+.++.+|+.+.-.. ..+.
T Consensus 4 ~k~vlITGas-ggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 4 IHVALVTGGN-KGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCEEEESSCS-SHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4578877754 54444 4456 789999999987765544332 23467888998542110 0137
Q ss_pred ccEEEECCch
Q 043626 114 VDGAISISAV 123 (291)
Q Consensus 114 fD~Vis~~~l 123 (291)
+|+||.+...
T Consensus 83 id~li~~Ag~ 92 (276)
T 1wma_A 83 LDVLVNNAGI 92 (276)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCcc
Confidence 8999987654
No 438
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=81.31 E-value=5 Score=34.89 Aligned_cols=73 Identities=14% Similarity=0.049 Sum_probs=46.6
Q ss_pred CCeEEEEcCCC--ch---hHHHHHHcCCeEEEEeCCHHHHHHHH---hcCCcceEEEccCCCCCC----C-----CCCcc
Q 043626 52 PRLLLDIGCGS--GL---SGETLSENGHQWIGLDISQSMLNIAL---EREVEGDLLLGDMGQGLG----L-----RPGVV 114 (291)
Q Consensus 52 ~~~VLDiGcGs--G~---~~~~L~~~g~~v~gvDis~~ml~~a~---~~~~~~~~~~~D~~~~~~----~-----~~~~f 114 (291)
+..||=.|+++ |. +...|++.|..|+.+|.++...+.+. .....+.++.+|+.+.-. + .-+.+
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 109 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSL 109 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 45888888764 43 45666677999999999864333222 222335788889865211 0 01578
Q ss_pred cEEEECCchh
Q 043626 115 DGAISISAVQ 124 (291)
Q Consensus 115 D~Vis~~~l~ 124 (291)
|++|.+..+.
T Consensus 110 D~lVnnAG~~ 119 (296)
T 3k31_A 110 DFVVHAVAFS 119 (296)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCcC
Confidence 9999886653
No 439
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=81.22 E-value=6.5 Score=32.34 Aligned_cols=90 Identities=11% Similarity=0.041 Sum_probs=55.5
Q ss_pred eEEEEcCCCchhHHHHH----HcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC---CCCCcccEEEECCchhhh
Q 043626 54 LLLDIGCGSGLSGETLS----ENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLG---LRPGVVDGAISISAVQWL 126 (291)
Q Consensus 54 ~VLDiGcGsG~~~~~L~----~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~---~~~~~fD~Vis~~~l~~l 126 (291)
+|+=+|+ |.+|..++ +.|+.|+++|.++..++...+.. ...++.+|....-. ..-..+|+||+...-.
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d-- 76 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-KATIIHGDGSHKEILRDAEVSKNDVVVILTPRD-- 76 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-SSEEEESCTTSHHHHHHHTCCTTCEEEECCSCH--
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-CCeEEEcCCCCHHHHHhcCcccCCEEEEecCCc--
Confidence 4666776 55555444 56899999999999887654432 45688888754211 1134689888652211
Q ss_pred ccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 127 CNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 127 ~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
....++..+.+.+.+...++..
T Consensus 77 ------------~~n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 77 ------------EVNLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp ------------HHHHHHHHHHHHTSCCCEEEEC
T ss_pred ------------HHHHHHHHHHHHHcCCCeEEEE
Confidence 1334555566666677776663
No 440
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=81.01 E-value=8.7 Score=33.13 Aligned_cols=107 Identities=11% Similarity=0.101 Sum_probs=63.2
Q ss_pred CCeEEEEcCCC-ch-hHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCc-hhhhcc
Q 043626 52 PRLLLDIGCGS-GL-SGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISA-VQWLCN 128 (291)
Q Consensus 52 ~~~VLDiGcGs-G~-~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~-l~~l~~ 128 (291)
..+|.=||||. |. ++..|...|+.|+++|.++..++...+. .+. ...+..+. -...|+|+..-. -++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~--g~~-~~~~~~~~----~~~~D~vi~~vp~~~~--- 73 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQ--GAQ-ACENNQKV----AAASDIIFTSLPNAGI--- 73 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTT--TCE-ECSSHHHH----HHHCSEEEECCSSHHH---
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC--CCe-ecCCHHHH----HhCCCEEEEECCCHHH---
Confidence 45788999986 32 4566667789999999999877766543 111 11111010 124688886521 112
Q ss_pred ccccCCchHHHHHHHHH---HHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcC
Q 043626 129 ADKASHEPRLRLKAFFG---SLYRCLARGARAVFQIYPESVAQRELILGAAMRAG 180 (291)
Q Consensus 129 ~~~~~~~p~~~l~~~l~---~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aG 180 (291)
+..++. .+...|++|..+ +......+...+.+.+.+.+.|
T Consensus 74 -----------~~~v~~~~~~l~~~l~~~~~v-v~~~~~~~~~~~~l~~~~~~~g 116 (301)
T 3cky_A 74 -----------VETVMNGPGGVLSACKAGTVI-VDMSSVSPSSTLKMAKVAAEKG 116 (301)
T ss_dssp -----------HHHHHHSTTCHHHHSCTTCEE-EECCCCCHHHHHHHHHHHHHTT
T ss_pred -----------HHHHHcCcchHhhcCCCCCEE-EECCCCCHHHHHHHHHHHHHcC
Confidence 344553 666778887654 4443344445666777776654
No 441
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=80.73 E-value=8.6 Score=32.85 Aligned_cols=104 Identities=13% Similarity=0.012 Sum_probs=60.9
Q ss_pred eEEEEcCCC-ch-hHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccccc
Q 043626 54 LLLDIGCGS-GL-SGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADK 131 (291)
Q Consensus 54 ~VLDiGcGs-G~-~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~ 131 (291)
+|.=||||. |. ++..|+. |++|+++|.++..++.+.+.. +... +..+. -...|+|+..-...
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g--~~~~--~~~~~----~~~~D~vi~~v~~~------- 66 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEF--GSEA--VPLER----VAEARVIFTCLPTT------- 66 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHH--CCEE--CCGGG----GGGCSEEEECCSSH-------
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCC--Cccc--CHHHH----HhCCCEEEEeCCCh-------
Confidence 577789987 33 4566777 999999999988776655431 1221 11111 13579888642211
Q ss_pred cCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcC
Q 043626 132 ASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAG 180 (291)
Q Consensus 132 ~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aG 180 (291)
..+..++..+...|++|..++ .+........+.+.+.+.+.|
T Consensus 67 ------~~~~~v~~~l~~~l~~~~~vv-~~s~~~~~~~~~l~~~~~~~g 108 (289)
T 2cvz_A 67 ------REVYEVAEALYPYLREGTYWV-DATSGEPEASRRLAERLREKG 108 (289)
T ss_dssp ------HHHHHHHHHHTTTCCTTEEEE-ECSCCCHHHHHHHHHHHHTTT
T ss_pred ------HHHHHHHHHHHhhCCCCCEEE-ECCCCCHHHHHHHHHHHHHcC
Confidence 114456677777787776554 333334445556666666544
No 442
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=80.70 E-value=7.3 Score=36.38 Aligned_cols=40 Identities=20% Similarity=0.226 Sum_probs=30.3
Q ss_pred CeEEEEcCCC-ch-hHHHHHHcCCeEEEEeCCHHHHHHHHhc
Q 043626 53 RLLLDIGCGS-GL-SGETLSENGHQWIGLDISQSMLNIALER 92 (291)
Q Consensus 53 ~~VLDiGcGs-G~-~~~~L~~~g~~v~gvDis~~ml~~a~~~ 92 (291)
++|.=||+|. |. ++..|++.|+.|+++|+++..++...+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g 44 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSG 44 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcC
Confidence 4677888875 32 4456667799999999999988877653
No 443
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=80.69 E-value=7.1 Score=36.81 Aligned_cols=41 Identities=37% Similarity=0.542 Sum_probs=34.1
Q ss_pred CCeEEEEcCCC-ch-hHHHHHHcCCeEEEEeCCHHHHHHHHhc
Q 043626 52 PRLLLDIGCGS-GL-SGETLSENGHQWIGLDISQSMLNIALER 92 (291)
Q Consensus 52 ~~~VLDiGcGs-G~-~~~~L~~~g~~v~gvDis~~ml~~a~~~ 92 (291)
.++|.=||+|. |. ++..|++.|+.|+++|+++..++..++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~ 50 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNG 50 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCC
Confidence 67999999996 44 5677778899999999999988887764
No 444
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=80.43 E-value=7.7 Score=34.04 Aligned_cols=73 Identities=15% Similarity=0.192 Sum_probs=46.9
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCC------------HHHHHHHH----hcCCcceEEEccCCCCCC----
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDIS------------QSMLNIAL----EREVEGDLLLGDMGQGLG---- 108 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis------------~~ml~~a~----~~~~~~~~~~~D~~~~~~---- 108 (291)
+..||=.|++.|. +...|++.|..|+++|.+ ...++.+. .....+.++.+|+.+.-.
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 125 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAV 125 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 4578888877664 445666779999999986 44444332 223456788889855211
Q ss_pred C-----CCCcccEEEECCchh
Q 043626 109 L-----RPGVVDGAISISAVQ 124 (291)
Q Consensus 109 ~-----~~~~fD~Vis~~~l~ 124 (291)
+ .-+.+|++|.+..+.
T Consensus 126 ~~~~~~~~g~iD~lVnnAg~~ 146 (317)
T 3oec_A 126 VDEALAEFGHIDILVSNVGIS 146 (317)
T ss_dssp HHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCCC
Confidence 0 014789999886653
No 445
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=80.27 E-value=15 Score=32.31 Aligned_cols=105 Identities=18% Similarity=0.070 Sum_probs=62.8
Q ss_pred CeEEEEcCCC-ch-hHHHHHHcC-CeEEEEeCCH-------HHHHHHHhcCCcceEEEc-cCCCCCCCCCCcccEEEECC
Q 043626 53 RLLLDIGCGS-GL-SGETLSENG-HQWIGLDISQ-------SMLNIALEREVEGDLLLG-DMGQGLGLRPGVVDGAISIS 121 (291)
Q Consensus 53 ~~VLDiGcGs-G~-~~~~L~~~g-~~v~gvDis~-------~ml~~a~~~~~~~~~~~~-D~~~~~~~~~~~fD~Vis~~ 121 (291)
.+|.=||+|. |. ++..|++.| +.|+++|.++ ..++.+.+.. + .. +..+. ....|+||+.-
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g--~---~~~s~~e~----~~~aDvVi~av 95 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELG--V---EPLDDVAG----IACADVVLSLV 95 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTT--C---EEESSGGG----GGGCSEEEECC
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCC--C---CCCCHHHH----HhcCCEEEEec
Confidence 4788899875 32 456666779 9999999997 4444443321 1 22 33221 13468888642
Q ss_pred chhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCC
Q 043626 122 AVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGF 181 (291)
Q Consensus 122 ~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF 181 (291)
..+. ....+..+...|++|..+ +......+.....+...+...|.
T Consensus 96 p~~~--------------~~~~~~~i~~~l~~~~iv-v~~st~~p~~~~~~~~~l~~~g~ 140 (317)
T 4ezb_A 96 VGAA--------------TKAVAASAAPHLSDEAVF-IDLNSVGPDTKALAAGAIATGKG 140 (317)
T ss_dssp CGGG--------------HHHHHHHHGGGCCTTCEE-EECCSCCHHHHHHHHHHHHTSSC
T ss_pred CCHH--------------HHHHHHHHHhhcCCCCEE-EECCCCCHHHHHHHHHHHHHcCC
Confidence 2211 234457777888887654 44445556666677777766553
No 446
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=80.26 E-value=7.3 Score=34.14 Aligned_cols=117 Identities=15% Similarity=0.023 Sum_probs=65.0
Q ss_pred eEEEEcCCCch--hHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccccc
Q 043626 54 LLLDIGCGSGL--SGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADK 131 (291)
Q Consensus 54 ~VLDiGcGsG~--~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~ 131 (291)
+|-=||.|.=. ....|++.|+.|++.|.++..++...+. +-....+..+. ...-|+||+.-. +
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~---G~~~~~s~~e~----~~~~dvvi~~l~-----~--- 71 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKL---GATVVENAIDA----ITPGGIVFSVLA-----D--- 71 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTT---TCEECSSGGGG----CCTTCEEEECCS-----S---
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc---CCeEeCCHHHH----HhcCCceeeecc-----c---
Confidence 67778887632 4566677899999999998765443322 11222222111 234688876521 1
Q ss_pred cCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeCCCCC
Q 043626 132 ASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSS 193 (291)
Q Consensus 132 ~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~p~~~ 193 (291)
+......++..+...+++|+.+ +......+.....+...+...|. .+++-|-+.
T Consensus 72 ----~~~~~~v~~~~~~~~~~~~~ii-id~sT~~p~~~~~~~~~~~~~g~---~~ldapVsG 125 (297)
T 4gbj_A 72 ----DAAVEELFSMELVEKLGKDGVH-VSMSTISPETSRQLAQVHEWYGA---HYVGAPIFA 125 (297)
T ss_dssp ----HHHHHHHSCHHHHHHHCTTCEE-EECSCCCHHHHHHHHHHHHHTTC---EEEECCEEC
T ss_pred ----hhhHHHHHHHHHHhhcCCCeEE-EECCCCChHHHHHHHHHHHhcCC---ceecCCcCC
Confidence 1111222345677888888754 45555677788888888888875 567777664
No 447
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=80.24 E-value=9.8 Score=32.59 Aligned_cols=74 Identities=19% Similarity=0.188 Sum_probs=52.1
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCH--HHHHHHHhcCCcceEEEccCCCCC----CCCCCcccEEEECCc
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQ--SMLNIALEREVEGDLLLGDMGQGL----GLRPGVVDGAISISA 122 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~--~ml~~a~~~~~~~~~~~~D~~~~~----~~~~~~fD~Vis~~~ 122 (291)
+..+|=-|.++|. ....|++.|..|+.+|.+. ..++...+...++..+.+|+.+.. -+..+.+|++|.+..
T Consensus 9 GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNAG 88 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNAG 88 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECCC
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECCC
Confidence 5577777777764 4566777899999999873 455555555566788889986532 244578999998866
Q ss_pred hhh
Q 043626 123 VQW 125 (291)
Q Consensus 123 l~~ 125 (291)
+..
T Consensus 89 i~~ 91 (247)
T 4hp8_A 89 IIR 91 (247)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 448
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=80.14 E-value=8.2 Score=33.13 Aligned_cols=73 Identities=18% Similarity=0.213 Sum_probs=49.8
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhc-CCcceEEEccCCCCCC----C-----CCCcccEEE
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALER-EVEGDLLLGDMGQGLG----L-----RPGVVDGAI 118 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~-~~~~~~~~~D~~~~~~----~-----~~~~fD~Vi 118 (291)
+..||=.|++.|. +...|++.|..|+.+|.++..++..... ...+.++.+|+.+.-. + .-+.+|++|
T Consensus 27 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 106 (277)
T 4dqx_A 27 QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLV 106 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4588888877664 4455667799999999998877655443 2346778889855211 0 014789999
Q ss_pred ECCchh
Q 043626 119 SISAVQ 124 (291)
Q Consensus 119 s~~~l~ 124 (291)
.+..+.
T Consensus 107 ~nAg~~ 112 (277)
T 4dqx_A 107 NNAGFG 112 (277)
T ss_dssp ECCCCC
T ss_pred ECCCcC
Confidence 886654
No 449
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=80.04 E-value=14 Score=35.10 Aligned_cols=117 Identities=13% Similarity=0.045 Sum_probs=67.3
Q ss_pred CCeEEEEc-CCCchh--HHHHHHcCCeEEEEeCCH--HHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhh
Q 043626 52 PRLLLDIG-CGSGLS--GETLSENGHQWIGLDISQ--SMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWL 126 (291)
Q Consensus 52 ~~~VLDiG-cGsG~~--~~~L~~~g~~v~gvDis~--~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l 126 (291)
..+|.=|| ||+|.+ ...|.++|+.|.|.|... .+.+...+. .+.+..+.-...+ ...+|+||.+..+..
T Consensus 19 ~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~--gi~~~~G~~~~~~---~~~~d~vV~Spgi~~- 92 (524)
T 3hn7_A 19 GMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQA--GVTIEEGYLIAHL---QPAPDLVVVGNAMKR- 92 (524)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHT--TCEEEESCCGGGG---CSCCSEEEECTTCCT-
T ss_pred CCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHC--CCEEECCCCHHHc---CCCCCEEEECCCcCC-
Confidence 45777777 466764 566678899999999853 344444332 3556554321211 235899998776642
Q ss_pred ccccccCCchHHHHHHH----------HHHHHHhccCCcEEEEEEcCCCh-HHHHHHHHHHHHcCCCC
Q 043626 127 CNADKASHEPRLRLKAF----------FGSLYRCLARGARAVFQIYPESV-AQRELILGAAMRAGFAG 183 (291)
Q Consensus 127 ~~~~~~~~~p~~~l~~~----------l~~l~~~LkpgG~lv~~~~~~~~-~~~~~i~~~~~~aGF~~ 183 (291)
.+|.- ..+ .+-+++.+.++..++..+....- ....++...|..+|+..
T Consensus 93 -------~~p~l--~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~G~~~ 151 (524)
T 3hn7_A 93 -------GMDVI--EYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYAGIDA 151 (524)
T ss_dssp -------TSHHH--HHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHTTCCC
T ss_pred -------CCHHH--HHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHcCCCc
Confidence 12321 111 12234444445566666655443 34556777888888864
No 450
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=80.02 E-value=7.8 Score=31.28 Aligned_cols=66 Identities=12% Similarity=0.106 Sum_probs=43.6
Q ss_pred eEEEEcCCCchhHHHH----HHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCch
Q 043626 54 LLLDIGCGSGLSGETL----SENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAV 123 (291)
Q Consensus 54 ~VLDiGcGsG~~~~~L----~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l 123 (291)
+||=.|+ +|.+|..+ ++.|+.|++++-++..+.... ..+.++.+|+.+.-.-.-..+|+||.+...
T Consensus 2 kvlVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 2 KIGIIGA-TGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---KDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred eEEEEcC-CchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 5777774 45555444 456899999999887665443 567889999854211111458999987655
No 451
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=79.95 E-value=9.5 Score=31.91 Aligned_cols=71 Identities=17% Similarity=0.091 Sum_probs=43.0
Q ss_pred CCeEEEEcCCCchhHHH----HHHcCCe-EEEEeCCH--HHHHHHHhcC--CcceEEEccCCCC-CC----CC-----CC
Q 043626 52 PRLLLDIGCGSGLSGET----LSENGHQ-WIGLDISQ--SMLNIALERE--VEGDLLLGDMGQG-LG----LR-----PG 112 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~----L~~~g~~-v~gvDis~--~ml~~a~~~~--~~~~~~~~D~~~~-~~----~~-----~~ 112 (291)
+..||=.|++ |.+|.. |++.|+. |+.++.++ ..++...+.. ..+.++.+|+.+. -. +. .+
T Consensus 5 ~k~vlVtGas-~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 83 (254)
T 1sby_A 5 NKNVIFVAAL-GGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CcEEEEECCC-ChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence 4578888875 455544 4456875 88898875 3444333332 2467788898643 10 00 14
Q ss_pred cccEEEECCch
Q 043626 113 VVDGAISISAV 123 (291)
Q Consensus 113 ~fD~Vis~~~l 123 (291)
.+|++|.+..+
T Consensus 84 ~id~lv~~Ag~ 94 (254)
T 1sby_A 84 TVDILINGAGI 94 (254)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 68999987654
No 452
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=79.89 E-value=6 Score=33.88 Aligned_cols=72 Identities=17% Similarity=0.123 Sum_probs=53.6
Q ss_pred CeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC---------CCCCcccEEEEC
Q 043626 53 RLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLG---------LRPGVVDGAISI 120 (291)
Q Consensus 53 ~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~---------~~~~~fD~Vis~ 120 (291)
..||=-|+++|. ....|++.|..|+.+|.++..++...+...++.++.+|+.+.-. -.-+..|++|.+
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNN 82 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNN 82 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 367777887775 55667788999999999999888777777778888999865211 012678999988
Q ss_pred Cchh
Q 043626 121 SAVQ 124 (291)
Q Consensus 121 ~~l~ 124 (291)
..+.
T Consensus 83 AG~~ 86 (247)
T 3ged_A 83 ACRG 86 (247)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6543
No 453
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=79.86 E-value=3.4 Score=36.10 Aligned_cols=114 Identities=16% Similarity=0.068 Sum_probs=68.0
Q ss_pred CeEEEEcCCC-ch-hHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhcccc
Q 043626 53 RLLLDIGCGS-GL-SGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNAD 130 (291)
Q Consensus 53 ~~VLDiGcGs-G~-~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~ 130 (291)
.+|.=||+|. |. ++..|++.|+.|+++|.++..++.+.+.. +. ...++.+ . .. .|+||..-.-
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g--~~-~~~~~~~---~-~~-aDvvi~~vp~------- 80 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAG--AT-LADSVAD---V-AA-ADLIHITVLD------- 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTT--CE-ECSSHHH---H-TT-SSEEEECCSS-------
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC--CE-EcCCHHH---H-Hh-CCEEEEECCC-------
Confidence 4788899886 32 55666677899999999998777665542 11 1122211 1 12 6888864211
Q ss_pred ccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeCCC
Q 043626 131 KASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPH 191 (291)
Q Consensus 131 ~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~p~ 191 (291)
...+..++..+...|++|..++ ......+.....+...+...|. .+++.|.
T Consensus 81 ------~~~~~~v~~~l~~~l~~g~ivv-~~st~~~~~~~~~~~~~~~~g~---~~~~~pv 131 (296)
T 3qha_A 81 ------DAQVREVVGELAGHAKPGTVIA-IHSTISDTTAVELARDLKARDI---HIVDAPV 131 (296)
T ss_dssp ------HHHHHHHHHHHHTTCCTTCEEE-ECSCCCHHHHHHHHHHHGGGTC---EEEECCE
T ss_pred ------hHHHHHHHHHHHHhcCCCCEEE-EeCCCCHHHHHHHHHHHHHcCC---EEEeCCC
Confidence 1125567788888888876554 4444455566666666665543 3445443
No 454
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=79.54 E-value=9 Score=32.75 Aligned_cols=106 Identities=11% Similarity=0.048 Sum_probs=61.5
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCC-HHHHHHHHh----cCCcceEEEccCCCCCC----C-----CCCcc
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDIS-QSMLNIALE----REVEGDLLLGDMGQGLG----L-----RPGVV 114 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis-~~ml~~a~~----~~~~~~~~~~D~~~~~~----~-----~~~~f 114 (291)
+..+|=.|++.|. +...|++.|..|+.++.. ...++...+ ....+.++.+|+.+.-. + ..+..
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 110 (271)
T 3v2g_A 31 GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGL 110 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5689989987764 455666779999988654 343333222 23446788889855211 0 01478
Q ss_pred cEEEECCchhhhccccccCCchHHH-----------HHHHHHHHHHhccCCcEEEEE
Q 043626 115 DGAISISAVQWLCNADKASHEPRLR-----------LKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 115 D~Vis~~~l~~l~~~~~~~~~p~~~-----------l~~~l~~l~~~LkpgG~lv~~ 160 (291)
|++|.+..+...... ...+... ...+++.+...|+.+|.+++.
T Consensus 111 D~lvnnAg~~~~~~~---~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 111 DILVNSAGIWHSAPL---EETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp CEEEECCCCCCCCCG---GGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cEEEECCCCCCCCCh---hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 999988655321110 0011111 134456667778888888874
No 455
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=79.33 E-value=6.2 Score=34.11 Aligned_cols=93 Identities=15% Similarity=0.015 Sum_probs=56.5
Q ss_pred CeEEEEcCCC-c-hhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCc--------c--------------eEEEccCCCCCC
Q 043626 53 RLLLDIGCGS-G-LSGETLSENGHQWIGLDISQSMLNIALEREVE--------G--------------DLLLGDMGQGLG 108 (291)
Q Consensus 53 ~~VLDiGcGs-G-~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~--------~--------------~~~~~D~~~~~~ 108 (291)
.+|.=||+|+ | .++..++..|+.|+++|.++..++.+.+.... + -....|+.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~-- 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA-- 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH--
Confidence 4688888876 2 24455667799999999999988877654100 0 0122222111
Q ss_pred CCCCcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 109 LRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 109 ~~~~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
-...|+||..- ... ......++..+...++++..++-..
T Consensus 83 --~~~aDlVi~av-~~~-----------~~~~~~v~~~l~~~~~~~~il~s~t 121 (283)
T 4e12_A 83 --VKDADLVIEAV-PES-----------LDLKRDIYTKLGELAPAKTIFATNS 121 (283)
T ss_dssp --TTTCSEEEECC-CSC-----------HHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred --hccCCEEEEec-cCc-----------HHHHHHHHHHHHhhCCCCcEEEECC
Confidence 13568888542 111 1125678888999999988665333
No 456
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=79.13 E-value=6.8 Score=36.70 Aligned_cols=91 Identities=14% Similarity=0.067 Sum_probs=56.8
Q ss_pred CeEEEEcCCC-ch-hHHHHHHcCCeEEEEeCCHHHHHHHHhcCC------------------c-ceEEEccCCCCCCCCC
Q 043626 53 RLLLDIGCGS-GL-SGETLSENGHQWIGLDISQSMLNIALEREV------------------E-GDLLLGDMGQGLGLRP 111 (291)
Q Consensus 53 ~~VLDiGcGs-G~-~~~~L~~~g~~v~gvDis~~ml~~a~~~~~------------------~-~~~~~~D~~~~~~~~~ 111 (291)
.+|.=||+|. |. ++..++..|+.|+++|+++..++.+..... . ...+..|+ +. -
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~----~ 112 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KE----L 112 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GG----G
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HH----H
Confidence 4799999987 33 556677789999999999988877654211 0 01122332 11 2
Q ss_pred CcccEEEECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 112 GVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 112 ~~fD~Vis~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
...|+||..- ... ......++..+...++++..++..
T Consensus 113 ~~aDlVIeaV-pe~-----------~~~k~~v~~~l~~~~~~~~ii~sn 149 (463)
T 1zcj_A 113 STVDLVVEAV-FED-----------MNLKKKVFAELSALCKPGAFLCTN 149 (463)
T ss_dssp TTCSEEEECC-CSC-----------HHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred CCCCEEEEcC-CCC-----------HHHHHHHHHHHHhhCCCCeEEEeC
Confidence 3578888542 211 111356788888888888776653
No 457
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=79.12 E-value=25 Score=29.59 Aligned_cols=73 Identities=12% Similarity=0.017 Sum_probs=46.2
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeC-CHHHHHHHHhc-----CCcceEEEccCCCC----CCC---------
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDI-SQSMLNIALER-----EVEGDLLLGDMGQG----LGL--------- 109 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDi-s~~ml~~a~~~-----~~~~~~~~~D~~~~----~~~--------- 109 (291)
+..||=.|++.|. +...|++.|++|+++|. ++..++.+.+. ...+.++.+|+.+. -..
T Consensus 11 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 90 (276)
T 1mxh_A 11 CPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFR 90 (276)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHH
Confidence 3478877766543 33445567899999999 87766544332 23467888898653 100
Q ss_pred CCCcccEEEECCchh
Q 043626 110 RPGVVDGAISISAVQ 124 (291)
Q Consensus 110 ~~~~fD~Vis~~~l~ 124 (291)
..+.+|++|.+..+.
T Consensus 91 ~~g~id~lv~nAg~~ 105 (276)
T 1mxh_A 91 AFGRCDVLVNNASAY 105 (276)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred hcCCCCEEEECCCCC
Confidence 013689999886653
No 458
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=78.92 E-value=4.9 Score=33.97 Aligned_cols=72 Identities=18% Similarity=0.177 Sum_probs=44.2
Q ss_pred CCeEEEEcCCCchhHH----HHHHcCCeEEEEeC-CHHHHHHHHhc----CCcceEEEccCCCCCC----CC-----CCc
Q 043626 52 PRLLLDIGCGSGLSGE----TLSENGHQWIGLDI-SQSMLNIALER----EVEGDLLLGDMGQGLG----LR-----PGV 113 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~----~L~~~g~~v~gvDi-s~~ml~~a~~~----~~~~~~~~~D~~~~~~----~~-----~~~ 113 (291)
+..||=.|++ |.+|. .|++.|+.|++++. ++..++..... ...+.++.+|+.+.-. +. -+.
T Consensus 21 ~k~vlItGas-ggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 99 (274)
T 1ja9_A 21 GKVALTTGAG-RGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG 99 (274)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4578877764 44454 44566899999998 77655443322 2346778889854211 10 136
Q ss_pred ccEEEECCchh
Q 043626 114 VDGAISISAVQ 124 (291)
Q Consensus 114 fD~Vis~~~l~ 124 (291)
+|++|.+..+.
T Consensus 100 ~d~vi~~Ag~~ 110 (274)
T 1ja9_A 100 LDFVMSNSGME 110 (274)
T ss_dssp EEEEECCCCCC
T ss_pred CCEEEECCCCC
Confidence 89999876543
No 459
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=78.47 E-value=9.4 Score=32.98 Aligned_cols=107 Identities=16% Similarity=0.110 Sum_probs=60.9
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHH-HHHHHH----hcCCcceEEEccCCCCCC----C-----CCCcc
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQS-MLNIAL----EREVEGDLLLGDMGQGLG----L-----RPGVV 114 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~-ml~~a~----~~~~~~~~~~~D~~~~~~----~-----~~~~f 114 (291)
+..||=.|++.|. +...|++.|..|+.++.+.. ..+.+. .....+.++.+|+.+.-. + .-+.+
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 126 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSL 126 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688888877664 44556677999999998754 222222 222356788899865211 0 12478
Q ss_pred cEEEECCchhhhccccccCCchHHHH-----------HHHHHHHHHhccCCcEEEEE
Q 043626 115 DGAISISAVQWLCNADKASHEPRLRL-----------KAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 115 D~Vis~~~l~~l~~~~~~~~~p~~~l-----------~~~l~~l~~~LkpgG~lv~~ 160 (291)
|++|.+....+....- ...+...+ ..+++.+...|+.+|++++.
T Consensus 127 D~lvnnAg~~~~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 127 NILVNNVAQQYPQQGL--EYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp CEEEECCCCCCCCSSG--GGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CEEEECCCCcCCCCCc--ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 9999875543211100 00011111 33455666677788888764
No 460
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=78.16 E-value=9.1 Score=32.49 Aligned_cols=73 Identities=14% Similarity=0.111 Sum_probs=49.2
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhc-----CCcceEEEccCCCCCCC---------CCCcc
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALER-----EVEGDLLLGDMGQGLGL---------RPGVV 114 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~-----~~~~~~~~~D~~~~~~~---------~~~~f 114 (291)
+..||=.|++.|. +...|++.|..|+.++.++..++.+.+. ...+.++.+|+.+.-.. ..+..
T Consensus 20 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 99 (266)
T 4egf_A 20 GKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGL 99 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4578888876654 4455667799999999998877655432 23467888998653210 01478
Q ss_pred cEEEECCchh
Q 043626 115 DGAISISAVQ 124 (291)
Q Consensus 115 D~Vis~~~l~ 124 (291)
|++|.+..+.
T Consensus 100 d~lv~nAg~~ 109 (266)
T 4egf_A 100 DVLVNNAGIS 109 (266)
T ss_dssp SEEEEECCCC
T ss_pred CEEEECCCcC
Confidence 9999876553
No 461
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=78.12 E-value=7.9 Score=29.95 Aligned_cols=95 Identities=17% Similarity=0.227 Sum_probs=53.3
Q ss_pred CCeEEEEcCCC-ch-hHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC--C-CCCCCcccEEEECCchhhh
Q 043626 52 PRLLLDIGCGS-GL-SGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG--L-GLRPGVVDGAISISAVQWL 126 (291)
Q Consensus 52 ~~~VLDiGcGs-G~-~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~--~-~~~~~~fD~Vis~~~l~~l 126 (291)
..+|+=+|||. |. ++..|...|..|+++|.++..++.+.. .....++.+|.... + ......+|+||....-..
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~-~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~- 96 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS-EFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDS- 96 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT-TCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHH-
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh-cCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcH-
Confidence 56899999865 33 334445668999999999876554431 12245666665321 1 111246898886522111
Q ss_pred ccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 127 CNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 127 ~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
....+..+.+.+.+...++...
T Consensus 97 -------------~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 97 -------------TNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp -------------HHHHHHHHHHHTSCCSEEEEEC
T ss_pred -------------HHHHHHHHHHHHCCCCeEEEEE
Confidence 2233444555556666666654
No 462
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=78.06 E-value=5.1 Score=34.61 Aligned_cols=115 Identities=12% Similarity=0.030 Sum_probs=67.5
Q ss_pred CeEEEEcCCC-c-hhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhcccc
Q 043626 53 RLLLDIGCGS-G-LSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNAD 130 (291)
Q Consensus 53 ~~VLDiGcGs-G-~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~ 130 (291)
.+|.=||+|. | .++..|++.|+.|+++|.++..++.+.+.. +. ...+..+. -...|+||..-. +
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g--~~-~~~~~~~~----~~~aDvvi~~vp-----~-- 67 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALG--AE-RAATPCEV----VESCPVTFAMLA-----D-- 67 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTT--CE-ECSSHHHH----HHHCSEEEECCS-----S--
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCC--Ce-ecCCHHHH----HhcCCEEEEEcC-----C--
Confidence 4677888875 2 245666677999999999998777665541 11 11111110 123588875421 0
Q ss_pred ccCCchHHHHHHHH---HHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCCCCcEEEeCCC
Q 043626 131 KASHEPRLRLKAFF---GSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPH 191 (291)
Q Consensus 131 ~~~~~p~~~l~~~l---~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF~~~~~~~~p~ 191 (291)
......++ ..+...|++|..+ +......+.....+...+...|. .+++.|-
T Consensus 68 ------~~~~~~v~~~~~~l~~~l~~~~~v-i~~st~~~~~~~~~~~~~~~~g~---~~~~~pv 121 (287)
T 3pef_A 68 ------PAAAEEVCFGKHGVLEGIGEGRGY-VDMSTVDPATSQRIGVAVVAKGG---RFLEAPV 121 (287)
T ss_dssp ------HHHHHHHHHSTTCHHHHCCTTCEE-EECSCCCHHHHHHHHHHHHHTTC---EEEECCE
T ss_pred ------HHHHHHHHcCcchHhhcCCCCCEE-EeCCCCCHHHHHHHHHHHHHhCC---EEEECCC
Confidence 11245566 6777888887654 44445556666677777776653 3445443
No 463
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=77.93 E-value=8.3 Score=32.08 Aligned_cols=73 Identities=15% Similarity=0.189 Sum_probs=46.4
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcC-Ccc-eEEEccCCCCCCCC--------CCcccEEE
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALERE-VEG-DLLLGDMGQGLGLR--------PGVVDGAI 118 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~-~~~-~~~~~D~~~~~~~~--------~~~fD~Vi 118 (291)
+..||=.|++.|. +...|++.|++|++++.++..++...+.. ..+ .++.+|+.+.-... .+.+|++|
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li 90 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSILV 90 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEEE
Confidence 4578888865543 33445566899999999987666544332 234 67888985421110 14689999
Q ss_pred ECCchh
Q 043626 119 SISAVQ 124 (291)
Q Consensus 119 s~~~l~ 124 (291)
.+..+.
T Consensus 91 ~~Ag~~ 96 (254)
T 2wsb_A 91 NSAGIA 96 (254)
T ss_dssp ECCCCC
T ss_pred ECCccC
Confidence 886543
No 464
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=77.54 E-value=5.4 Score=34.06 Aligned_cols=73 Identities=11% Similarity=-0.032 Sum_probs=45.2
Q ss_pred CCeEEEEcCC-CchhHH----HHHHcCCeEEEEeCCHH---HHHHHHhcCCcceEEEccCCCCCC----C-----CCCcc
Q 043626 52 PRLLLDIGCG-SGLSGE----TLSENGHQWIGLDISQS---MLNIALEREVEGDLLLGDMGQGLG----L-----RPGVV 114 (291)
Q Consensus 52 ~~~VLDiGcG-sG~~~~----~L~~~g~~v~gvDis~~---ml~~a~~~~~~~~~~~~D~~~~~~----~-----~~~~f 114 (291)
+..||=.|++ +|.+|. .|++.|+.|+.++.++. .++........+.++.+|+.+.-. + ..+.+
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 85 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL 85 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4578888876 244444 44456899999998764 333333322336788889865210 0 12478
Q ss_pred cEEEECCchh
Q 043626 115 DGAISISAVQ 124 (291)
Q Consensus 115 D~Vis~~~l~ 124 (291)
|++|.+..+.
T Consensus 86 d~lv~nAg~~ 95 (275)
T 2pd4_A 86 DFIVHSVAFA 95 (275)
T ss_dssp EEEEECCCCC
T ss_pred CEEEECCccC
Confidence 9999886653
No 465
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=77.08 E-value=7.3 Score=35.03 Aligned_cols=89 Identities=13% Similarity=0.053 Sum_probs=55.8
Q ss_pred CCeEEEEcCC--CchhHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCC---CC-CCCCCcccEEEECCchh
Q 043626 52 PRLLLDIGCG--SGLSGETLSEN-GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQ---GL-GLRPGVVDGAISISAVQ 124 (291)
Q Consensus 52 ~~~VLDiGcG--sG~~~~~L~~~-g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~---~~-~~~~~~fD~Vis~~~l~ 124 (291)
+.+||=+|++ .|.....+++. |..|+++. ++.-++.+++.... .++...-.+ .+ ....+.+|+|+-...-
T Consensus 165 g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~-~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~- 241 (371)
T 3gqv_A 165 PVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAE-EVFDYRAPNLAQTIRTYTKNNLRYALDCITN- 241 (371)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCS-EEEETTSTTHHHHHHHHTTTCCCEEEESSCS-
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCc-EEEECCCchHHHHHHHHccCCccEEEECCCc-
Confidence 6799999984 57777777764 78888885 88888888765432 223221101 00 0113459999854221
Q ss_pred hhccccccCCchHHHHHHHHHHHHHhc-cCCcEEEE
Q 043626 125 WLCNADKASHEPRLRLKAFFGSLYRCL-ARGARAVF 159 (291)
Q Consensus 125 ~l~~~~~~~~~p~~~l~~~l~~l~~~L-kpgG~lv~ 159 (291)
...+..+.++| ++||++++
T Consensus 242 ----------------~~~~~~~~~~l~~~~G~iv~ 261 (371)
T 3gqv_A 242 ----------------VESTTFCFAAIGRAGGHYVS 261 (371)
T ss_dssp ----------------HHHHHHHHHHSCTTCEEEEE
T ss_pred ----------------hHHHHHHHHHhhcCCCEEEE
Confidence 14566778888 69999876
No 466
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=76.99 E-value=9.3 Score=32.72 Aligned_cols=73 Identities=19% Similarity=0.078 Sum_probs=49.0
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCC-CC---C------CCCc
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQG-LG---L------RPGV 113 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~-~~---~------~~~~ 113 (291)
+..||=.|++.|. +...|++.|..|++++.+...++.+.+.. ..+.++.+|+.+. -. + ..+.
T Consensus 12 ~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~ 91 (311)
T 3o26_A 12 RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGK 91 (311)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSS
T ss_pred CcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCC
Confidence 4578888877653 44555667999999999987665544332 2467888998653 10 0 0247
Q ss_pred ccEEEECCchh
Q 043626 114 VDGAISISAVQ 124 (291)
Q Consensus 114 fD~Vis~~~l~ 124 (291)
+|++|.+..+.
T Consensus 92 iD~lv~nAg~~ 102 (311)
T 3o26_A 92 LDILVNNAGVA 102 (311)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCccc
Confidence 89999987653
No 467
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=76.98 E-value=4.8 Score=36.38 Aligned_cols=91 Identities=12% Similarity=0.159 Sum_probs=57.7
Q ss_pred CCeEEEEcCCC-c-hhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceE-----------EEccCCCCCCCCCCcccEEE
Q 043626 52 PRLLLDIGCGS-G-LSGETLSENGHQWIGLDISQSMLNIALEREVEGDL-----------LLGDMGQGLGLRPGVVDGAI 118 (291)
Q Consensus 52 ~~~VLDiGcGs-G-~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~-----------~~~D~~~~~~~~~~~fD~Vi 118 (291)
..+|.=||+|. | .++..|++.|+.|+.+|.++..++...+...+..+ ...|+.+ .-...|+||
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~e----a~~~aDvVi 104 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKA----SLEGVTDIL 104 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHH----HHTTCCEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHH----HHhcCCEEE
Confidence 45899999986 3 35566677789999999999888777664322111 0111100 012467777
Q ss_pred ECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 119 SISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 119 s~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
..- |...+..++..+...|+++..++..
T Consensus 105 laV--------------p~~~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 105 IVV--------------PSFAFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp ECC--------------CHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred ECC--------------CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 531 3334778888999999888766543
No 468
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=76.90 E-value=20 Score=30.71 Aligned_cols=87 Identities=20% Similarity=0.181 Sum_probs=53.5
Q ss_pred CeEEEEcCCC-c-hhHHHHHHc--CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhcc
Q 043626 53 RLLLDIGCGS-G-LSGETLSEN--GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCN 128 (291)
Q Consensus 53 ~~VLDiGcGs-G-~~~~~L~~~--g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~ 128 (291)
.+|.=||||. | .++..|... ++.|+++|.++..++.+.+... ......|..+. -...|+||..-..
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~-~~~~~~~~~~~----~~~aDvVilavp~----- 76 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGI-VDEATADFKVF----AALADVIILAVPI----- 76 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTS-CSEEESCTTTT----GGGCSEEEECSCH-----
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCC-cccccCCHHHh----hcCCCEEEEcCCH-----
Confidence 4788899886 2 244556666 5799999999988877655321 11223343221 1357888864222
Q ss_pred ccccCCchHHHHHHHHHHHHHh-ccCCcEEE
Q 043626 129 ADKASHEPRLRLKAFFGSLYRC-LARGARAV 158 (291)
Q Consensus 129 ~~~~~~~p~~~l~~~l~~l~~~-LkpgG~lv 158 (291)
.....++..+... |+++..++
T Consensus 77 ---------~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 77 ---------KKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp ---------HHHHHHHHHHHTSCCCTTCEEE
T ss_pred ---------HHHHHHHHHHHhcCCCCCCEEE
Confidence 2245777788777 88776544
No 469
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=76.82 E-value=1.1 Score=46.19 Aligned_cols=101 Identities=15% Similarity=0.069 Sum_probs=67.4
Q ss_pred CCeEEEEcCCCchhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccccc
Q 043626 52 PRLLLDIGCGSGLSGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNADK 131 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~~~ 131 (291)
+.++||+|+|.-.=...|......|+.+|+-|.+-- ..--...-.|+..|....--...-.+|.|.|+++|..-|-+..
T Consensus 822 ~~~~lDlGTGPE~RiLsLiP~~~pvtm~D~RP~ae~-~~~w~~~T~f~~~DyL~~~~~~~~~~D~vt~i~SLGAA~A~a~ 900 (1289)
T 1ej6_A 822 GDVVLDLGTGPEAKILELIPATSPVTCVDIRPTAQP-SGCWNVRTTFLELDYLSDGWITGVRGDIVTCMLSLGAAAAGKS 900 (1289)
T ss_dssp TCCEEEESCCSSCGGGGTSCTTSCEEEEESSCCCSC-STTBSSCEEEEESCTTSSSCGGGCCCSEEEECSCHHHHHHHHT
T ss_pred cceEEEccCCCcceeeeecCCCCceEEecccCchhh-hccccccceeeEccccccceeecCCCcEEEEEeechhhhhccC
Confidence 679999999987666666666789999999663211 1111123588898875433233567999999999987653211
Q ss_pred cCCchHHHHHHHHHHHHHhccCCc--EEEE
Q 043626 132 ASHEPRLRLKAFFGSLYRCLARGA--RAVF 159 (291)
Q Consensus 132 ~~~~p~~~l~~~l~~l~~~LkpgG--~lv~ 159 (291)
- .+...++++.+.+.+.| .+.+
T Consensus 901 ~------tl~~~~~q~l~~~~~~~~~~l~l 924 (1289)
T 1ej6_A 901 M------TFDAAFQQLIKVLSKSTANVVLV 924 (1289)
T ss_dssp C------CHHHHHHHHHHHHHTSCCSEEEE
T ss_pred C------cHHHHHHHHHHHHHhcCccEEEE
Confidence 1 16778888888777766 3444
No 470
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=76.72 E-value=11 Score=28.95 Aligned_cols=93 Identities=11% Similarity=0.112 Sum_probs=55.6
Q ss_pred CeEEEEcCCCchhHHHH----HHcCCeEEEEeCC-HHHHHHHHhc-CCcceEEEccCCCCCC---CCCCcccEEEECCch
Q 043626 53 RLLLDIGCGSGLSGETL----SENGHQWIGLDIS-QSMLNIALER-EVEGDLLLGDMGQGLG---LRPGVVDGAISISAV 123 (291)
Q Consensus 53 ~~VLDiGcGsG~~~~~L----~~~g~~v~gvDis-~~ml~~a~~~-~~~~~~~~~D~~~~~~---~~~~~fD~Vis~~~l 123 (291)
.+|+=+|| |..+..+ .+.|+.|+.+|.+ +..++..... ...+.++.+|..+.-. ..-...|+||+...-
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 46887776 5555444 4568999999997 4544333332 2346788888754211 113468888865221
Q ss_pred hhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 124 QWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 124 ~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
. .....+..+.+.+.|...++...
T Consensus 82 d--------------~~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 82 D--------------ADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp H--------------HHHHHHHHHHHHHTSSSCEEEEC
T ss_pred h--------------HHHHHHHHHHHHHCCCCEEEEEE
Confidence 1 13345556667777777777655
No 471
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=76.71 E-value=34 Score=31.68 Aligned_cols=41 Identities=24% Similarity=0.404 Sum_probs=31.5
Q ss_pred CCeEEEEcCCC-ch-hHHHHHHcCCeEEEEeCCHHHHHHHHhc
Q 043626 52 PRLLLDIGCGS-GL-SGETLSENGHQWIGLDISQSMLNIALER 92 (291)
Q Consensus 52 ~~~VLDiGcGs-G~-~~~~L~~~g~~v~gvDis~~ml~~a~~~ 92 (291)
+..+-=||+|. |. .+..|++.|+.|+++|+++..++...+.
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g 53 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNG 53 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCC
Confidence 45677788886 43 5567778899999999999998877653
No 472
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=76.65 E-value=1.2 Score=40.42 Aligned_cols=90 Identities=12% Similarity=0.016 Sum_probs=53.1
Q ss_pred CCeEEEEc-CC-CchhHHHHHH-cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCC---CCCCcccEEEECCchhh
Q 043626 52 PRLLLDIG-CG-SGLSGETLSE-NGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLG---LRPGVVDGAISISAVQW 125 (291)
Q Consensus 52 ~~~VLDiG-cG-sG~~~~~L~~-~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~---~~~~~fD~Vis~~~l~~ 125 (291)
+.+||=+| +| .|.....++. .|..|++++ ++.-++.+++.... .++..+- ..+. .....+|+|+-...-.
T Consensus 184 g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~-~v~~~~~-~~~~~~~~~~~g~D~vid~~g~~- 259 (375)
T 2vn8_A 184 GKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGAD-DVIDYKS-GSVEEQLKSLKPFDFILDNVGGS- 259 (375)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCS-EEEETTS-SCHHHHHHTSCCBSEEEESSCTT-
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCC-EEEECCc-hHHHHHHhhcCCCCEEEECCCCh-
Confidence 67999999 44 3666656655 478999998 66777777554322 1222111 1000 0114689998653321
Q ss_pred hccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 126 LCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 126 l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
...+....++|++||++++.
T Consensus 260 ---------------~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 260 ---------------TETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp ---------------HHHHGGGGBCSSSCCEEEES
T ss_pred ---------------hhhhHHHHHhhcCCcEEEEe
Confidence 12345667889999998864
No 473
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=76.56 E-value=6.6 Score=33.35 Aligned_cols=106 Identities=11% Similarity=0.056 Sum_probs=58.9
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCC---HHHHHHHHh----cCCcceEEEccCCCCCC----C-----CCC
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDIS---QSMLNIALE----REVEGDLLLGDMGQGLG----L-----RPG 112 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis---~~ml~~a~~----~~~~~~~~~~D~~~~~~----~-----~~~ 112 (291)
+..+|=.|+++|. +...|++.|..|+.++.+ ...++.+.+ ....+.++.+|+.+.-. + ..+
T Consensus 11 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 90 (262)
T 3ksu_A 11 NKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFG 90 (262)
T ss_dssp TCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4588888877664 345555678999998754 333333322 22346788889865211 0 115
Q ss_pred cccEEEECCchhhhccccccCCchHHHH-----------HHHHHHHHHhccCCcEEEEE
Q 043626 113 VVDGAISISAVQWLCNADKASHEPRLRL-----------KAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 113 ~fD~Vis~~~l~~l~~~~~~~~~p~~~l-----------~~~l~~l~~~LkpgG~lv~~ 160 (291)
..|++|.+..+...... ...+...+ ..+++.+...|+++|.+++.
T Consensus 91 ~iD~lvnnAg~~~~~~~---~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 146 (262)
T 3ksu_A 91 KVDIAINTVGKVLKKPI---VETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITI 146 (262)
T ss_dssp SEEEEEECCCCCCSSCG---GGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCCEEEECCCCCCCCCc---ccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEE
Confidence 78999988665432110 01111112 23344555566677888764
No 474
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=76.15 E-value=8.1 Score=32.78 Aligned_cols=72 Identities=14% Similarity=0.079 Sum_probs=48.3
Q ss_pred CCeEEEEcCCC--ch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcC-----CcceEEEccCCCCCC---------CCCC
Q 043626 52 PRLLLDIGCGS--GL---SGETLSENGHQWIGLDISQSMLNIALERE-----VEGDLLLGDMGQGLG---------LRPG 112 (291)
Q Consensus 52 ~~~VLDiGcGs--G~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~-----~~~~~~~~D~~~~~~---------~~~~ 112 (291)
+..+|=-|+++ |. ....|++.|.+|+.+|.++..++.+.+.. .++.++.+|+.+.-. -.-+
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVG 85 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 56888888643 42 45667788999999999976665544322 246788899865211 1126
Q ss_pred cccEEEECCch
Q 043626 113 VVDGAISISAV 123 (291)
Q Consensus 113 ~fD~Vis~~~l 123 (291)
..|++|.+..+
T Consensus 86 ~iD~lvnnAg~ 96 (256)
T 4fs3_A 86 NIDGVYHSIAF 96 (256)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEecccc
Confidence 78999987654
No 475
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=76.02 E-value=12 Score=31.81 Aligned_cols=73 Identities=16% Similarity=0.147 Sum_probs=47.2
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcC------CcceEEEccCCCCCC-----CCCCcccEE
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALERE------VEGDLLLGDMGQGLG-----LRPGVVDGA 117 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~------~~~~~~~~D~~~~~~-----~~~~~fD~V 117 (291)
+..+|=.|++.|. +...|++.|..|+.+|.++..++.+.+.. ..+.++..|+...-. -.-+..|++
T Consensus 10 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 89 (267)
T 3t4x_A 10 GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDIL 89 (267)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEE
Confidence 4578888876653 44556677999999999987665544322 235677788754210 012578999
Q ss_pred EECCchh
Q 043626 118 ISISAVQ 124 (291)
Q Consensus 118 is~~~l~ 124 (291)
|.+..+.
T Consensus 90 v~nAg~~ 96 (267)
T 3t4x_A 90 INNLGIF 96 (267)
T ss_dssp EECCCCC
T ss_pred EECCCCC
Confidence 9886653
No 476
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=75.78 E-value=15 Score=32.21 Aligned_cols=91 Identities=15% Similarity=0.074 Sum_probs=57.9
Q ss_pred CCeEEEEcCCC-c-hhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcc-----eE-----EEccCCCCCCCCCCcccEEEE
Q 043626 52 PRLLLDIGCGS-G-LSGETLSENGHQWIGLDISQSMLNIALEREVEG-----DL-----LLGDMGQGLGLRPGVVDGAIS 119 (291)
Q Consensus 52 ~~~VLDiGcGs-G-~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~-----~~-----~~~D~~~~~~~~~~~fD~Vis 119 (291)
..+|+=||+|. | .++..|++.|+.|+.+ .++..++..++..... .+ ...|. + ....+|+||.
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~----~~~~~D~vil 92 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDP-S----AVQGADLVLF 92 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCG-G----GGTTCSEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH-H----HcCCCCEEEE
Confidence 46899999986 3 3666777789999999 8888887776543211 11 01111 1 1246898886
Q ss_pred CCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEc
Q 043626 120 ISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIY 162 (291)
Q Consensus 120 ~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~ 162 (291)
.---+ .+..++..+...|+++..++....
T Consensus 93 avk~~--------------~~~~~l~~l~~~l~~~~~iv~~~n 121 (318)
T 3hwr_A 93 CVKST--------------DTQSAALAMKPALAKSALVLSLQN 121 (318)
T ss_dssp CCCGG--------------GHHHHHHHHTTTSCTTCEEEEECS
T ss_pred Ecccc--------------cHHHHHHHHHHhcCCCCEEEEeCC
Confidence 42221 156788888889988877665443
No 477
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=75.66 E-value=22 Score=31.33 Aligned_cols=120 Identities=13% Similarity=-0.036 Sum_probs=67.2
Q ss_pred CCeEEEEcC-CCchh--HHHHHHcCCeEEEEeCCH--HHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhh
Q 043626 52 PRLLLDIGC-GSGLS--GETLSENGHQWIGLDISQ--SMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWL 126 (291)
Q Consensus 52 ~~~VLDiGc-GsG~~--~~~L~~~g~~v~gvDis~--~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l 126 (291)
..+|+=||. |+|.. ...|.++|+.|++.|..+ .+.+...+. .+.+..+.-... +....+|+||.+..+..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~--gi~v~~g~~~~~--l~~~~~d~vV~Spgi~~- 78 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEAL--GIDVYEGFDAAQ--LDEFKADVYVIGNVAKR- 78 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHT--TCEEEESCCGGG--GGSCCCSEEEECTTCCT-
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhC--CCEEECCCCHHH--cCCCCCCEEEECCCcCC-
Confidence 457888886 56774 456778999999999864 344444333 355554421111 11135899998766532
Q ss_pred ccccccCCchHHHH--------HHHHHHHHHhccCCcEEEEEEcCCCh-HHHHHHHHHHHHcCCCC
Q 043626 127 CNADKASHEPRLRL--------KAFFGSLYRCLARGARAVFQIYPESV-AQRELILGAAMRAGFAG 183 (291)
Q Consensus 127 ~~~~~~~~~p~~~l--------~~~l~~l~~~LkpgG~lv~~~~~~~~-~~~~~i~~~~~~aGF~~ 183 (291)
.+|.-.. ..-.+.+++.+..+..++..+....- ....++...+..+|...
T Consensus 79 -------~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~~~ 137 (326)
T 3eag_A 79 -------GMDVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAGLAP 137 (326)
T ss_dssp -------TCHHHHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTTCCC
T ss_pred -------CCHHHHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcCCCc
Confidence 1232110 00012344444445566666655443 34556777788888764
No 478
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=75.56 E-value=6.4 Score=34.82 Aligned_cols=106 Identities=14% Similarity=0.165 Sum_probs=61.2
Q ss_pred CeEEEEcCCC-c-hhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceE-------------EEccCCCCCCCCCCcccEE
Q 043626 53 RLLLDIGCGS-G-LSGETLSENGHQWIGLDISQSMLNIALEREVEGDL-------------LLGDMGQGLGLRPGVVDGA 117 (291)
Q Consensus 53 ~~VLDiGcGs-G-~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~-------------~~~D~~~~~~~~~~~fD~V 117 (291)
.+|.=||||. | .++..|+..|+.|+++|.++..++...+... ..+ ...|..+ ....+|+|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~D~v 79 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGA-IIAEGPGLAGTAHPDLLTSDIGL----AVKDADVI 79 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTS-EEEESSSCCEEECCSEEESCHHH----HHTTCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCC-eEEeccccccccccceecCCHHH----HHhcCCEE
Confidence 5789999986 3 2455666778999999999988777665421 111 1111100 01357888
Q ss_pred EECCchhhhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCC-ChHHHHHHHHHHHHcC
Q 043626 118 ISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE-SVAQRELILGAAMRAG 180 (291)
Q Consensus 118 is~~~l~~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~-~~~~~~~i~~~~~~aG 180 (291)
|..-.-+. ...++..+...|++|..++.. +. ..... .+.+.+...|
T Consensus 80 i~~v~~~~--------------~~~~~~~l~~~l~~~~~vv~~--~~~~~~~~-~~~~~l~~~~ 126 (359)
T 1bg6_A 80 LIVVPAIH--------------HASIAANIASYISEGQLIILN--PGATGGAL-EFRKILRENG 126 (359)
T ss_dssp EECSCGGG--------------HHHHHHHHGGGCCTTCEEEES--SCCSSHHH-HHHHHHHHTT
T ss_pred EEeCCchH--------------HHHHHHHHHHhCCCCCEEEEc--CCCchHHH-HHHHHHHhcC
Confidence 86422211 346778888889888765544 32 21222 2445555554
No 479
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=75.54 E-value=18 Score=30.52 Aligned_cols=88 Identities=10% Similarity=0.037 Sum_probs=53.6
Q ss_pred CCeEEEEcCCC-ch-hHHHHHHcCCe-EEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhcc
Q 043626 52 PRLLLDIGCGS-GL-SGETLSENGHQ-WIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCN 128 (291)
Q Consensus 52 ~~~VLDiGcGs-G~-~~~~L~~~g~~-v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~ 128 (291)
..+|.=||||. |. ++..|+..|+. ++++|.++..++.+.+... +. ...|..+. ....|+||..-..
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g-~~-~~~~~~~~----~~~~Dvvi~av~~----- 78 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVE-AE-YTTDLAEV----NPYAKLYIVSLKD----- 78 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTT-CE-EESCGGGS----CSCCSEEEECCCH-----
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC-Cc-eeCCHHHH----hcCCCEEEEecCH-----
Confidence 35788899874 32 44555566877 8999999988776655421 22 22333221 1357988864222
Q ss_pred ccccCCchHHHHHHHHHHHHHhccCCcEEEE
Q 043626 129 ADKASHEPRLRLKAFFGSLYRCLARGARAVF 159 (291)
Q Consensus 129 ~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~ 159 (291)
.....++..+...+++|..++-
T Consensus 79 ---------~~~~~v~~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 79 ---------SAFAELLQGIVEGKREEALMVH 100 (266)
T ss_dssp ---------HHHHHHHHHHHTTCCTTCEEEE
T ss_pred ---------HHHHHHHHHHHhhcCCCcEEEE
Confidence 2245677777777877765543
No 480
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=75.41 E-value=8.5 Score=33.32 Aligned_cols=107 Identities=16% Similarity=0.060 Sum_probs=60.1
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCC--HHHHHHHH----hcCCcceEEEccCCCCCC----C-----CCCc
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDIS--QSMLNIAL----EREVEGDLLLGDMGQGLG----L-----RPGV 113 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis--~~ml~~a~----~~~~~~~~~~~D~~~~~~----~-----~~~~ 113 (291)
+..||=.|++.|. +...|++.|..|+.++.+ ...++.+. .....+.++.+|+.+.-. + ..+.
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 128 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGG 128 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4588888876654 445566779999999886 23333222 222346777788854210 0 0157
Q ss_pred ccEEEECCchhhhccccccCCchHHHH-----------HHHHHHHHHhccCCcEEEEE
Q 043626 114 VDGAISISAVQWLCNADKASHEPRLRL-----------KAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 114 fD~Vis~~~l~~l~~~~~~~~~p~~~l-----------~~~l~~l~~~LkpgG~lv~~ 160 (291)
.|++|.+..+...... . ...+...+ ..+++.+...|+.+|.+++.
T Consensus 129 iD~lv~nAg~~~~~~~-~-~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~i 184 (294)
T 3r3s_A 129 LDILALVAGKQTAIPE-I-KDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITT 184 (294)
T ss_dssp CCEEEECCCCCCCCSS-G-GGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred CCEEEECCCCcCCCCC-c-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEE
Confidence 8999988665321110 0 00011112 23455666677788988874
No 481
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=75.13 E-value=5.8 Score=37.67 Aligned_cols=86 Identities=14% Similarity=0.061 Sum_probs=51.8
Q ss_pred CCeEEEEcCCC-chhH-HHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCCCCCcccEEEECCchhhhccc
Q 043626 52 PRLLLDIGCGS-GLSG-ETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGLRPGVVDGAISISAVQWLCNA 129 (291)
Q Consensus 52 ~~~VLDiGcGs-G~~~-~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l~~~ 129 (291)
+.+|+=+|+|. |... ..+...|..|+++|.++.-+..|.+... ++ .++.+. -...|+|+....-.++.
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga--~~--~~l~e~----l~~aDvVi~atgt~~~i-- 343 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGF--DV--VTVEEA----IGDADIVVTATGNKDII-- 343 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC--EE--CCHHHH----GGGCSEEEECSSSSCSB--
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC--EE--ecHHHH----HhCCCEEEECCCCHHHH--
Confidence 67999999864 3322 2233457899999999988777765432 22 222111 13579998753221211
Q ss_pred cccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 130 DKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 130 ~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
-....+.|++||+++..-
T Consensus 344 --------------~~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 344 --------------MLEHIKAMKDHAILGNIG 361 (494)
T ss_dssp --------------CHHHHHHSCTTCEEEECS
T ss_pred --------------HHHHHHhcCCCcEEEEeC
Confidence 124567799999887643
No 482
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=75.06 E-value=29 Score=29.81 Aligned_cols=72 Identities=22% Similarity=0.166 Sum_probs=45.6
Q ss_pred CCeEEEEcCCCchhHHHH----HHcCCeEEEEeCCHHHHHHHHhc-----CCcceEE-EccCCCCCCCC--CCcccEEEE
Q 043626 52 PRLLLDIGCGSGLSGETL----SENGHQWIGLDISQSMLNIALER-----EVEGDLL-LGDMGQGLGLR--PGVVDGAIS 119 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L----~~~g~~v~gvDis~~ml~~a~~~-----~~~~~~~-~~D~~~~~~~~--~~~fD~Vis 119 (291)
+.+||=.|+ +|.+|..+ ++.|+.|++++-++......... ...+.++ .+|+.+.-.+. -..+|+||.
T Consensus 11 ~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 89 (342)
T 1y1p_A 11 GSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH 89 (342)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred CCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEEE
Confidence 568888875 46655554 45689999999987765443322 1346677 68885432221 236899998
Q ss_pred CCchh
Q 043626 120 ISAVQ 124 (291)
Q Consensus 120 ~~~l~ 124 (291)
+....
T Consensus 90 ~A~~~ 94 (342)
T 1y1p_A 90 IASVV 94 (342)
T ss_dssp CCCCC
T ss_pred eCCCC
Confidence 76543
No 483
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=74.93 E-value=1.6 Score=39.59 Aligned_cols=94 Identities=17% Similarity=0.066 Sum_probs=51.7
Q ss_pred CCeEEEEcCCCchhHHHHH----HcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC--CCCCCCcccEEEECCchhh
Q 043626 52 PRLLLDIGCGSGLSGETLS----ENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG--LGLRPGVVDGAISISAVQW 125 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~----~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~--~~~~~~~fD~Vis~~~l~~ 125 (291)
+.+|+=+|+| ..+..++ ..|..|+++|.++..++.+.+.... . +..|.... +.-.-..+|+||.......
T Consensus 166 ~~~V~ViGaG--~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~-~-~~~~~~~~~~l~~~~~~~DvVi~~~g~~~ 241 (369)
T 2eez_A 166 PASVVILGGG--TVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGG-R-VITLTATEANIKKSVQHADLLIGAVLVPG 241 (369)
T ss_dssp CCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT-S-EEEEECCHHHHHHHHHHCSEEEECCC---
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCc-e-EEEecCCHHHHHHHHhCCCEEEECCCCCc
Confidence 5789999984 4444333 4589999999999888776553321 1 11121110 0000125799886533221
Q ss_pred hccccccCCchHHHHHHHHHHHHHhccCCcEEEEE
Q 043626 126 LCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQ 160 (291)
Q Consensus 126 l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~ 160 (291)
... ..-+.+.....|++||.++..
T Consensus 242 ~~~-----------~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 242 AKA-----------PKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp ---------------CCSCHHHHTTSCTTCEEEEC
T ss_pred ccc-----------chhHHHHHHHhhcCCCEEEEE
Confidence 000 011245667888999987653
No 484
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=74.58 E-value=7.5 Score=33.36 Aligned_cols=73 Identities=21% Similarity=0.168 Sum_probs=47.6
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhc----CCcceEEEccCCCCCCC--------CCCcccE
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALER----EVEGDLLLGDMGQGLGL--------RPGVVDG 116 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~----~~~~~~~~~D~~~~~~~--------~~~~fD~ 116 (291)
+..+|=.|++.|. +...|++.|..|+.+|.++..++.+.+. ...+.++.+|+.+.-.. ..+.+|+
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~ 112 (275)
T 4imr_A 33 GRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVDI 112 (275)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCE
Confidence 4578888876654 4455667799999999887655444332 34567888998553110 0157899
Q ss_pred EEECCchh
Q 043626 117 AISISAVQ 124 (291)
Q Consensus 117 Vis~~~l~ 124 (291)
+|.+..+.
T Consensus 113 lvnnAg~~ 120 (275)
T 4imr_A 113 LVINASAQ 120 (275)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99886653
No 485
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=74.53 E-value=10 Score=31.54 Aligned_cols=71 Identities=17% Similarity=0.124 Sum_probs=43.7
Q ss_pred CCeEEEEcCCCchhHHHHHHc---CCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC-----C---CCCCCcccEEEEC
Q 043626 52 PRLLLDIGCGSGLSGETLSEN---GHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG-----L---GLRPGVVDGAISI 120 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~~---g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~-----~---~~~~~~fD~Vis~ 120 (291)
+..||=.|++.| +|..+++. |+.|++++-++..++...+ ...+.++..|+.+. + --.-+.+|++|.+
T Consensus 5 ~k~vlITGas~g-IG~~~a~~l~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~ 82 (245)
T 3e9n_A 5 KKIAVVTGATGG-MGIEIVKDLSRDHIVYALGRNPEHLAALAE-IEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHA 82 (245)
T ss_dssp -CEEEEESTTSH-HHHHHHHHHTTTSEEEEEESCHHHHHHHHT-STTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEEC
T ss_pred CCEEEEEcCCCH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHh-hcCCcceecccchHHHHHHHHHHHHhcCCCCEEEEC
Confidence 457888887655 44444332 7899999999988776655 44566777775331 0 0112578999988
Q ss_pred Cchh
Q 043626 121 SAVQ 124 (291)
Q Consensus 121 ~~l~ 124 (291)
..+.
T Consensus 83 Ag~~ 86 (245)
T 3e9n_A 83 AAVA 86 (245)
T ss_dssp C---
T ss_pred CCcC
Confidence 6654
No 486
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=74.43 E-value=13 Score=31.74 Aligned_cols=73 Identities=18% Similarity=0.154 Sum_probs=47.8
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeC-------------CHHHHHHHHh----cCCcceEEEccCCCCCC---
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDI-------------SQSMLNIALE----REVEGDLLLGDMGQGLG--- 108 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDi-------------s~~ml~~a~~----~~~~~~~~~~D~~~~~~--- 108 (291)
+..+|=.|+++|. +...|++.|..|+.+|. +...++.+.+ ....+.++.+|+.+.-.
T Consensus 11 ~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 90 (277)
T 3tsc_A 11 GRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRK 90 (277)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 5688888887764 45666678999999998 5655544432 23346778889854211
Q ss_pred -C-----CCCcccEEEECCchh
Q 043626 109 -L-----RPGVVDGAISISAVQ 124 (291)
Q Consensus 109 -~-----~~~~fD~Vis~~~l~ 124 (291)
+ .-+..|++|.+..+.
T Consensus 91 ~~~~~~~~~g~id~lvnnAg~~ 112 (277)
T 3tsc_A 91 VVDDGVAALGRLDIIVANAGVA 112 (277)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 0 015689999886654
No 487
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=74.31 E-value=10 Score=32.54 Aligned_cols=73 Identities=11% Similarity=-0.050 Sum_probs=45.0
Q ss_pred CCeEEEEcCCC-chhHH----HHHHcCCeEEEEeCCHH---HHHHHHhcCCcceEEEccCCCCCC----C-----CCCcc
Q 043626 52 PRLLLDIGCGS-GLSGE----TLSENGHQWIGLDISQS---MLNIALEREVEGDLLLGDMGQGLG----L-----RPGVV 114 (291)
Q Consensus 52 ~~~VLDiGcGs-G~~~~----~L~~~g~~v~gvDis~~---ml~~a~~~~~~~~~~~~D~~~~~~----~-----~~~~f 114 (291)
+..||=.|+++ |.+|. .|++.|++|++++.++. .++........+.++.+|+.+.-. + .-+.+
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 100 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSL 100 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 45788888762 44444 44567899999998864 333322222336788889864211 0 12478
Q ss_pred cEEEECCchh
Q 043626 115 DGAISISAVQ 124 (291)
Q Consensus 115 D~Vis~~~l~ 124 (291)
|++|.+..+.
T Consensus 101 D~lv~~Ag~~ 110 (285)
T 2p91_A 101 DIIVHSIAYA 110 (285)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999886653
No 488
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=74.18 E-value=4 Score=34.27 Aligned_cols=72 Identities=13% Similarity=0.154 Sum_probs=47.3
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCC-----CCCcccEEEECCch
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGL-----RPGVVDGAISISAV 123 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~-----~~~~fD~Vis~~~l 123 (291)
+..||=.|++.|. +...|++.|++|+++|.++..++... ....+.++.+|+.+.-.. .-+.+|++|.+..+
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~ 84 (246)
T 2ag5_A 6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGF 84 (246)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCcc
Confidence 4578877766553 34555667999999999987665444 333567888898542110 12578999987654
Q ss_pred h
Q 043626 124 Q 124 (291)
Q Consensus 124 ~ 124 (291)
.
T Consensus 85 ~ 85 (246)
T 2ag5_A 85 V 85 (246)
T ss_dssp C
T ss_pred C
Confidence 3
No 489
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=74.13 E-value=13 Score=35.19 Aligned_cols=114 Identities=11% Similarity=0.059 Sum_probs=66.2
Q ss_pred CeEEEEcCCC-c-hhHHHHHHcCCeEEEEeCCHHHHHHHHhcCC-cceEE-EccCCCCCCCCCCcccEEEECCchhhhcc
Q 043626 53 RLLLDIGCGS-G-LSGETLSENGHQWIGLDISQSMLNIALEREV-EGDLL-LGDMGQGLGLRPGVVDGAISISAVQWLCN 128 (291)
Q Consensus 53 ~~VLDiGcGs-G-~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~-~~~~~-~~D~~~~~~~~~~~fD~Vis~~~l~~l~~ 128 (291)
.+|-=||+|. | .++..|++.|+.|++.|.++..++.+.+... ...+. ..++.+... .-...|+|+..-...
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~-~l~~aDvVil~Vp~~---- 79 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVS-KLKKPRRIILLVKAG---- 79 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHH-TBCSSCEEEECSCSS----
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHh-hccCCCEEEEecCCh----
Confidence 4677888875 2 2456666789999999999998887765422 11121 112111000 001358777541111
Q ss_pred ccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCC
Q 043626 129 ADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGF 181 (291)
Q Consensus 129 ~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF 181 (291)
.....++..+...|++|.. ++......+.....+...+...|.
T Consensus 80 ---------~~v~~vl~~l~~~L~~g~i-IId~st~~~~~t~~~~~~l~~~Gi 122 (484)
T 4gwg_A 80 ---------QAVDDFIEKLVPLLDTGDI-IIDGGNSEYRDTTRRCRDLKAKGI 122 (484)
T ss_dssp ---------HHHHHHHHHHGGGCCTTCE-EEECSCCCHHHHHHHHHHHHHTTC
T ss_pred ---------HHHHHHHHHHHHhcCCCCE-EEEcCCCCchHHHHHHHHHHhhcc
Confidence 1256778888888888764 444444455555566666776664
No 490
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=73.89 E-value=11 Score=32.16 Aligned_cols=72 Identities=17% Similarity=0.166 Sum_probs=49.6
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCCCC---------CCCcccEEEE
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGLGL---------RPGVVDGAIS 119 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~~~---------~~~~fD~Vis 119 (291)
+..||=.|++.|. +...|++.|+.|+++|.++..++...+....+.++.+|+.+.-.. .-+.+|++|.
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 88 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVN 88 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4578888876653 445556679999999999887776655555577888998542110 0146899998
Q ss_pred CCch
Q 043626 120 ISAV 123 (291)
Q Consensus 120 ~~~l 123 (291)
+..+
T Consensus 89 nAg~ 92 (270)
T 1yde_A 89 NAGH 92 (270)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7654
No 491
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=73.76 E-value=18 Score=30.79 Aligned_cols=73 Identities=14% Similarity=0.055 Sum_probs=46.7
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHH-----------HHHHHhcCCcceEEEccCCCCCCC--------
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSM-----------LNIALEREVEGDLLLGDMGQGLGL-------- 109 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~m-----------l~~a~~~~~~~~~~~~D~~~~~~~-------- 109 (291)
+..+|=.|++.|. +...|++.|.+|+.++.+... ..........+.++.+|+.+.-..
T Consensus 6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 85 (274)
T 3e03_A 6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATV 85 (274)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 5688888888764 456666789999999987531 112222234567888998652110
Q ss_pred -CCCcccEEEECCchh
Q 043626 110 -RPGVVDGAISISAVQ 124 (291)
Q Consensus 110 -~~~~fD~Vis~~~l~ 124 (291)
..+..|++|.+..+.
T Consensus 86 ~~~g~iD~lvnnAG~~ 101 (274)
T 3e03_A 86 DTFGGIDILVNNASAI 101 (274)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCcc
Confidence 014789999887654
No 492
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=73.70 E-value=13 Score=31.87 Aligned_cols=70 Identities=16% Similarity=0.103 Sum_probs=47.3
Q ss_pred eEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcC---CcceEEEccCCCCC---------CCCCCcccEEE
Q 043626 54 LLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALERE---VEGDLLLGDMGQGL---------GLRPGVVDGAI 118 (291)
Q Consensus 54 ~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~---~~~~~~~~D~~~~~---------~~~~~~fD~Vi 118 (291)
.||=.|++.|. +...|++.|+.|++++.++..++...+.. ..+.++.+|+.+.- .-.-+.+|++|
T Consensus 23 ~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 102 (272)
T 2nwq_A 23 TLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLI 102 (272)
T ss_dssp EEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 68888876653 44556677999999999987776554432 24677888986521 11125689999
Q ss_pred ECCch
Q 043626 119 SISAV 123 (291)
Q Consensus 119 s~~~l 123 (291)
.+..+
T Consensus 103 nnAG~ 107 (272)
T 2nwq_A 103 NNAGL 107 (272)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 88654
No 493
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=73.68 E-value=6 Score=33.80 Aligned_cols=73 Identities=16% Similarity=0.121 Sum_probs=48.0
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhc----CCcceEEEccCCCCCC----CC------CCcc
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALER----EVEGDLLLGDMGQGLG----LR------PGVV 114 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~----~~~~~~~~~D~~~~~~----~~------~~~f 114 (291)
+..||=.|++.|. +...|++.|++|++++.++..++.+.+. ...+.++.+|+.+.-. +. .+.+
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i 100 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKL 100 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCC
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4578888876553 3455556799999999998766554332 2346778889854211 00 1678
Q ss_pred cEEEECCchh
Q 043626 115 DGAISISAVQ 124 (291)
Q Consensus 115 D~Vis~~~l~ 124 (291)
|++|.+..+.
T Consensus 101 d~lv~nAg~~ 110 (273)
T 1ae1_A 101 NILVNNAGVV 110 (273)
T ss_dssp CEEEECCCCC
T ss_pred cEEEECCCCC
Confidence 9999886553
No 494
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=73.28 E-value=11 Score=31.31 Aligned_cols=90 Identities=9% Similarity=-0.051 Sum_probs=57.1
Q ss_pred CCeEEEEcCCCchhHHHHHH----cCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCCC---CCCCCcccEEEECCchh
Q 043626 52 PRLLLDIGCGSGLSGETLSE----NGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQGL---GLRPGVVDGAISISAVQ 124 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~~----~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~~---~~~~~~fD~Vis~~~l~ 124 (291)
..+|+=+|| |..+..+++ .|+ |+++|.++..++.+. ..+.++.+|..+.- ...-...|.||+...-.
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR---SGANFVHGDPTRVSDLEKANVRGARAVIVDLESD 82 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCH
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCc
Confidence 457888887 566665554 467 999999998877665 34778889875421 11235688888652111
Q ss_pred hhccccccCCchHHHHHHHHHHHHHhccCCcEEEEEE
Q 043626 125 WLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQI 161 (291)
Q Consensus 125 ~l~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~ 161 (291)
.....+..+.+.+.|+..++...
T Consensus 83 --------------~~n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 83 --------------SETIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp --------------HHHHHHHHHHHHHCSSSEEEEEC
T ss_pred --------------HHHHHHHHHHHHHCCCCeEEEEE
Confidence 12334455566678887777754
No 495
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=72.32 E-value=13 Score=27.66 Aligned_cols=65 Identities=18% Similarity=0.262 Sum_probs=40.5
Q ss_pred CCeEEEEcCCCchhHHHH----HHcCCeEEEEeCCHHHHHHHHhcCCcceEEEccCCCC--C-CCCCCcccEEEEC
Q 043626 52 PRLLLDIGCGSGLSGETL----SENGHQWIGLDISQSMLNIALEREVEGDLLLGDMGQG--L-GLRPGVVDGAISI 120 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L----~~~g~~v~gvDis~~ml~~a~~~~~~~~~~~~D~~~~--~-~~~~~~fD~Vis~ 120 (291)
..+|+=+|| |..+..+ .+.|+.++++|.++..++.+... ...++.+|..+. + ......+|+||..
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~--~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 77 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY--ATHAVIANATEENELLSLGIRNFEYVIVA 77 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT--CSEEEECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--CCEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 347899997 4555444 45588999999998776654432 235666776431 0 1113468998865
No 496
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=72.30 E-value=18 Score=34.02 Aligned_cols=115 Identities=10% Similarity=0.006 Sum_probs=66.0
Q ss_pred CCeEEEEcCCC-c-hhHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcceEE-EccCCCCCCCCCCcccEEEECCchhhhcc
Q 043626 52 PRLLLDIGCGS-G-LSGETLSENGHQWIGLDISQSMLNIALEREVEGDLL-LGDMGQGLGLRPGVVDGAISISAVQWLCN 128 (291)
Q Consensus 52 ~~~VLDiGcGs-G-~~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~~~~~-~~D~~~~~~~~~~~fD~Vis~~~l~~l~~ 128 (291)
..+|.=||+|. | .++..|++.|+.|++.|.++..++...+......+. ..|+.+.+. .-...|+||..-...
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~-~l~~aDvVil~Vp~~---- 89 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVE-SLETPRRILLMVKAG---- 89 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHH-TBCSSCEEEECSCSS----
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHh-CCCCCCEEEEECCCH----
Confidence 34788888886 2 355666777899999999998887766543210111 112211000 001368888642110
Q ss_pred ccccCCchHHHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcCC
Q 043626 129 ADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGF 181 (291)
Q Consensus 129 ~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aGF 181 (291)
..+..++..+...|++|.. ++......+.....+.+.+...|+
T Consensus 90 ---------~~v~~vl~~l~~~l~~g~i-IId~s~g~~~~t~~l~~~l~~~g~ 132 (480)
T 2zyd_A 90 ---------AGTDAAIDSLKPYLDKGDI-IIDGGNTFFQDTIRRNRELSAEGF 132 (480)
T ss_dssp ---------SHHHHHHHHHGGGCCTTCE-EEECSCCCHHHHHHHHHHHHHTTC
T ss_pred ---------HHHHHHHHHHHhhcCCCCE-EEECCCCCHHHHHHHHHHHHHCCC
Confidence 1156777888888888764 445444444455556666666554
No 497
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=71.90 E-value=9.6 Score=32.72 Aligned_cols=74 Identities=23% Similarity=0.236 Sum_probs=50.7
Q ss_pred CCeEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhc----CCcceEEEccCCCCC---------CCCCCccc
Q 043626 52 PRLLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALER----EVEGDLLLGDMGQGL---------GLRPGVVD 115 (291)
Q Consensus 52 ~~~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~----~~~~~~~~~D~~~~~---------~~~~~~fD 115 (291)
+..+|=-|+++|. ....|++.|..|+.+|.++..++.+.+. ..++..+.+|+.+.- .-.-+..|
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 88 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVD 88 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCc
Confidence 4577777777664 4566677899999999999877665443 234667778886521 11236899
Q ss_pred EEEECCchhh
Q 043626 116 GAISISAVQW 125 (291)
Q Consensus 116 ~Vis~~~l~~ 125 (291)
++|.+..+.+
T Consensus 89 iLVNNAG~~~ 98 (255)
T 4g81_D 89 ILINNAGIQY 98 (255)
T ss_dssp EEEECCCCCC
T ss_pred EEEECCCCCC
Confidence 9998876543
No 498
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=71.84 E-value=20 Score=29.95 Aligned_cols=70 Identities=14% Similarity=0.090 Sum_probs=45.7
Q ss_pred eEEEEcCCCch---hHHHHHHcCCeEEEEeCCHHHHHHHHhcC-CcceEEEccCCCCC---------CCCCCcccEEEEC
Q 043626 54 LLLDIGCGSGL---SGETLSENGHQWIGLDISQSMLNIALERE-VEGDLLLGDMGQGL---------GLRPGVVDGAISI 120 (291)
Q Consensus 54 ~VLDiGcGsG~---~~~~L~~~g~~v~gvDis~~ml~~a~~~~-~~~~~~~~D~~~~~---------~~~~~~fD~Vis~ 120 (291)
.+|=.|++.|. +...|++.|+.|+.++.++..++.+.+.. ..+.++.+|+.+.- .-..+.+|++|.+
T Consensus 2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnn 81 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNN 81 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEEC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 45666665543 44556677999999999987766554432 34677888986521 1123578999987
Q ss_pred Cch
Q 043626 121 SAV 123 (291)
Q Consensus 121 ~~l 123 (291)
..+
T Consensus 82 Ag~ 84 (248)
T 3asu_A 82 AGL 84 (248)
T ss_dssp CCC
T ss_pred CCc
Confidence 654
No 499
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=71.66 E-value=1.8 Score=39.45 Aligned_cols=94 Identities=22% Similarity=0.088 Sum_probs=51.3
Q ss_pred CCeEEEEcCCCchhHHHHH----HcCCeEEEEeCCHHHHHHHHhcC-CcceEEEccCCCCCCCCCCcccEEEECCchhhh
Q 043626 52 PRLLLDIGCGSGLSGETLS----ENGHQWIGLDISQSMLNIALERE-VEGDLLLGDMGQGLGLRPGVVDGAISISAVQWL 126 (291)
Q Consensus 52 ~~~VLDiGcGsG~~~~~L~----~~g~~v~gvDis~~ml~~a~~~~-~~~~~~~~D~~~~~~~~~~~fD~Vis~~~l~~l 126 (291)
+.+|+=+|+| ..+..++ ..|..|+++|.++..++.+.+.. ..+.....+. ..+.-.-..+|+||........
T Consensus 168 g~~V~ViG~G--~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~-~~l~~~l~~aDvVi~~~~~p~~ 244 (377)
T 2vhw_A 168 PADVVVIGAG--TAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSA-YELEGAVKRADLVIGAVLVPGA 244 (377)
T ss_dssp CCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCH-HHHHHHHHHCSEEEECCCCTTS
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCH-HHHHHHHcCCCEEEECCCcCCC
Confidence 6799999985 4444333 45789999999999887776532 1111111110 0000001257998864221110
Q ss_pred ccccccCCchHHHHHHHHHHHHHhccCCcEEEE
Q 043626 127 CNADKASHEPRLRLKAFFGSLYRCLARGARAVF 159 (291)
Q Consensus 127 ~~~~~~~~~p~~~l~~~l~~l~~~LkpgG~lv~ 159 (291)
. .| .-+.......|+|||.++.
T Consensus 245 -~------t~----~li~~~~l~~mk~g~~iV~ 266 (377)
T 2vhw_A 245 -K------AP----KLVSNSLVAHMKPGAVLVD 266 (377)
T ss_dssp -C------CC----CCBCHHHHTTSCTTCEEEE
T ss_pred -C------Cc----ceecHHHHhcCCCCcEEEE
Confidence 0 00 0123456778999998764
No 500
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=71.64 E-value=12 Score=35.04 Aligned_cols=119 Identities=17% Similarity=0.201 Sum_probs=65.2
Q ss_pred CCeEEEEcCCC-ch-hHHHHHHcCCeEEEEeCCHHHHHHHHhcCCc----------------ceE-EEccCCCCCCCCCC
Q 043626 52 PRLLLDIGCGS-GL-SGETLSENGHQWIGLDISQSMLNIALEREVE----------------GDL-LLGDMGQGLGLRPG 112 (291)
Q Consensus 52 ~~~VLDiGcGs-G~-~~~~L~~~g~~v~gvDis~~ml~~a~~~~~~----------------~~~-~~~D~~~~~~~~~~ 112 (291)
..+|-=||+|. |. ++..|++.|+.|+++|+++..++...+.... ..+ +..|+.+. -.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea----~~ 83 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEG----VK 83 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHH----HT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHH----Hh
Confidence 45788888885 43 4566778899999999999888776653211 011 11221100 12
Q ss_pred cccEEEEC-CchhhhccccccCCchH-HHHHHHHHHHHHhccCCcEEEEEEcCCChHHHHHHHHHHHHcC
Q 043626 113 VVDGAISI-SAVQWLCNADKASHEPR-LRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAG 180 (291)
Q Consensus 113 ~fD~Vis~-~~l~~l~~~~~~~~~p~-~~l~~~l~~l~~~LkpgG~lv~~~~~~~~~~~~~i~~~~~~aG 180 (291)
..|+||.. .+.. +. ....|. ..+..++..+...|++|..++... .-.+...+.+...+.+.+
T Consensus 84 ~aDvvii~Vptp~---~~--~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgtt~~l~~~l~e~~ 147 (446)
T 4a7p_A 84 DADAVFIAVGTPS---RR--GDGHADLSYVFAAAREIAENLTKPSVIVTKS-TVPVGTGDEVERIIAEVA 147 (446)
T ss_dssp TCSEEEECCCCCB---CT--TTCCBCTHHHHHHHHHHHHSCCSCCEEEECS-CCCTTHHHHHHHHHHHHS
T ss_pred cCCEEEEEcCCCC---cc--ccCCccHHHHHHHHHHHHHhcCCCCEEEEeC-CCCchHHHHHHHHHHHhC
Confidence 45777653 1110 00 000111 125677888889999887776531 223334445555555544
Done!