Query 043633
Match_columns 128
No_of_seqs 103 out of 206
Neff 6.5
Searched_HMMs 13730
Date Mon Mar 25 11:28:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043633.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/043633hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2pula1 d.144.1.6 (A:5-396) Me 100.0 6E-34 4.4E-38 230.1 13.7 114 2-126 277-390 (392)
2 d2giab1 d.18.1.4 (B:28-173) GB 29.1 12 0.00086 24.3 1.7 19 49-67 125-143 (146)
3 d1u5ta1 a.4.5.54 (A:20-164) Va 23.8 78 0.0057 20.5 5.2 32 8-47 11-42 (145)
4 d1mb4a1 c.2.1.3 (A:1-132,A:355 20.7 16 0.0012 23.7 1.1 15 62-76 8-22 (147)
5 d1q8ha_ g.32.1.1 (A:) Osteocal 20.5 28 0.0021 17.3 1.8 18 59-78 20-37 (37)
6 d2gz1a1 c.2.1.3 (A:2-127,A:330 20.4 15 0.0011 23.6 0.9 15 62-76 9-23 (154)
7 d2g17a1 c.2.1.3 (A:1-153,A:309 18.5 17 0.0012 23.7 0.9 15 62-76 9-23 (179)
8 d2huec1 a.22.1.1 (C:20-101) Hi 18.2 51 0.0037 19.0 3.0 20 48-67 36-55 (82)
9 d2btoa2 d.79.2.1 (A:253-432) T 18.1 38 0.0028 22.1 2.7 21 9-29 126-146 (180)
10 d1sr9a1 a.5.7.1 (A:437-491) 2- 16.7 36 0.0026 18.5 1.9 13 10-22 41-53 (55)
No 1
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=100.00 E-value=6e-34 Score=230.05 Aligned_cols=114 Identities=26% Similarity=0.534 Sum_probs=106.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCchhhhhCChhhHHHHHHHHHHHHHHHHHhhhHHHHhhhhcCCcccc
Q 043633 2 YKEWILRTIEETWTLFHQKFTALWHQHKDGSGEAYLPEIYNKPELQQLVQEKFMKDLFHDTLGFGAAKMIRRIVGVAHVE 81 (128)
Q Consensus 2 ~~~~ll~~I~~~w~~F~~~F~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~il~D~~GfAG~e~iRRiiG~A~V~ 81 (128)
+++|++++|.++|+.|.++|.++|.++.++ .++..++ |++.||++||+|++|||||||||||+|+|||+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~-------~~~~~~~----~~~~~l~~~~~d~~~~~g~~~~rr~~g~a~~~ 345 (392)
T d2pula1 277 DREPLYEHVNQVWETFEETFSEAWQKDSLD-------VYANIDG----YLTDTLSHIFEEAIGFAGCELIRRTIGLAHVA 345 (392)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------TTTTSTT----HHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCH
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcccc-------cccccHH----HHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 578999999999999999999999999863 2344555 89999999999999999999999999999999
Q ss_pred CCcCCCChhHHHHHHHHHHHHHHHHHHcCcCCCCHHHHHHHHHHh
Q 043633 82 DFESIKDDSKRATCERQALELAKLLLKERRNFQAITEVVSAIRKL 126 (128)
Q Consensus 82 D~~~I~d~~~R~~aer~aL~ig~~li~~r~~~~~i~~~~~~~~~~ 126 (128)
||++|+|.+.|+.||+.+|.+|+.||+||++++++++++++++++
T Consensus 346 d~~~i~~~~~r~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~ 390 (392)
T d2pula1 346 DLDTIVPFDKRIGRKRLALETGTAFIEKRSEFKTITDVIELFKLL 390 (392)
T ss_dssp HHHTCSSHHHHHHHHHHHHHHHHHHHHHTTTCCSHHHHHHHHHHH
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999875
No 2
>d2giab1 d.18.1.4 (B:28-173) GBP21 {Trypanosoma brucei [TaxId: 5691]}
Probab=29.06 E-value=12 Score=24.26 Aligned_cols=19 Identities=21% Similarity=0.627 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHhhhH
Q 043633 49 LVQEKFMKDLFHDTLGFGA 67 (128)
Q Consensus 49 ~~~e~~l~~il~D~~GfAG 67 (128)
--+|+||+.-|.++.||+-
T Consensus 125 vtlehflesaltesfgf~q 143 (146)
T d2giab1 125 VTLEHFLESALDESFGFRQ 143 (146)
T ss_dssp HHHHHHHHHHHHHTTCHHH
T ss_pred hhHHHHHHHhhhhhcchhh
Confidence 3579999999999999974
No 3
>d1u5ta1 a.4.5.54 (A:20-164) Vacuolar sorting protein SNF8 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.79 E-value=78 Score=20.50 Aligned_cols=32 Identities=13% Similarity=0.433 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCchhhhhCChhhH
Q 043633 8 RTIEETWTLFHQKFTALWHQHKDGSGEAYLPEIYNKPELQ 47 (128)
Q Consensus 8 ~~I~~~w~~F~~~F~~lw~~~~~~~~~~~~~~~~~~~~~~ 47 (128)
+++.+-.+.|.+...++-.+|..+ +.++|.++
T Consensus 11 ~ql~~QL~vF~~~L~~FA~kH~~e--------I~~np~FR 42 (145)
T d1u5ta1 11 VELRDQLMVFQERLVEFAKKHNSE--------LQASPEFR 42 (145)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTT--------TTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHH--------hhcCHHHH
Confidence 567778889999999999998852 55666643
No 4
>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}
Probab=20.66 E-value=16 Score=23.74 Aligned_cols=15 Identities=20% Similarity=0.350 Sum_probs=12.7
Q ss_pred HHhhhHHHHhhhhcC
Q 043633 62 TLGFGAAKMIRRIVG 76 (128)
Q Consensus 62 ~~GfAG~e~iRRiiG 76 (128)
+-||.|.|+||++..
T Consensus 8 ATGyvG~eLi~lLl~ 22 (147)
T d1mb4a1 8 WRGMVGSVLMQRMVE 22 (147)
T ss_dssp CSSHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHh
Confidence 359999999999864
No 5
>d1q8ha_ g.32.1.1 (A:) Osteocalcin {Pig (Sus scrofa) [TaxId: 9823]}
Probab=20.46 E-value=28 Score=17.33 Aligned_cols=18 Identities=39% Similarity=0.781 Sum_probs=12.1
Q ss_pred HHHHHhhhHHHHhhhhcCCc
Q 043633 59 FHDTLGFGAAKMIRRIVGVA 78 (128)
Q Consensus 59 l~D~~GfAG~e~iRRiiG~A 78 (128)
+.|-+||- |.-||..|.|
T Consensus 20 lad~igfq--eayrrfyg~a 37 (37)
T d1q8ha_ 20 LADHIGFQ--EAYRRFYGIA 37 (37)
T ss_dssp HHHHHCHH--HHHHHHHSCC
T ss_pred HHHHhhHH--HHHHHHhccC
Confidence 56667774 5677877764
No 6
>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=20.36 E-value=15 Score=23.61 Aligned_cols=15 Identities=27% Similarity=0.315 Sum_probs=12.1
Q ss_pred HHhhhHHHHhhhhcC
Q 043633 62 TLGFGAAKMIRRIVG 76 (128)
Q Consensus 62 ~~GfAG~e~iRRiiG 76 (128)
+-||.|.|++|..-.
T Consensus 9 ATGyvG~eLirlL~~ 23 (154)
T d2gz1a1 9 ATGAVGAQMIKMLEE 23 (154)
T ss_dssp TTSHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHc
Confidence 469999999987743
No 7
>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}
Probab=18.49 E-value=17 Score=23.72 Aligned_cols=15 Identities=13% Similarity=0.414 Sum_probs=12.8
Q ss_pred HHhhhHHHHhhhhcC
Q 043633 62 TLGFGAAKMIRRIVG 76 (128)
Q Consensus 62 ~~GfAG~e~iRRiiG 76 (128)
+-||.|.|++|..-+
T Consensus 9 ATGyvG~eLlrlL~~ 23 (179)
T d2g17a1 9 ASGYAGAELVSYVNR 23 (179)
T ss_dssp TTSHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHh
Confidence 469999999998865
No 8
>d2huec1 a.22.1.1 (C:20-101) Histone H4 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=18.23 E-value=51 Score=19.04 Aligned_cols=20 Identities=15% Similarity=0.418 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHhhhH
Q 043633 48 QLVQEKFMKDLFHDTLGFGA 67 (128)
Q Consensus 48 ~~~~e~~l~~il~D~~GfAG 67 (128)
....++|+.+|.+|++-||=
T Consensus 36 ~~~l~~~l~~i~~~a~~~~~ 55 (82)
T d2huec1 36 RGVLKVFLENVIRDAVTYTE 55 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999998873
No 9
>d2btoa2 d.79.2.1 (A:253-432) Tubulin alpha-subunit {Prosthecobacter dejongeii [TaxId: 48465]}
Probab=18.09 E-value=38 Score=22.11 Aligned_cols=21 Identities=19% Similarity=0.490 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhc
Q 043633 9 TIEETWTLFHQKFTALWHQHK 29 (128)
Q Consensus 9 ~I~~~w~~F~~~F~~lw~~~~ 29 (128)
.|.++++.-.++|.+++++.+
T Consensus 126 sI~~~f~~~~~~F~~m~~rkA 146 (180)
T d2btoa2 126 EIARVLDRICHNFDKLWQRKA 146 (180)
T ss_dssp THHHHHHHHHHHHHHHHTTTT
T ss_pred hHHHHHHHHHHHHHHHHhcCh
Confidence 478889999999999998877
No 10
>d1sr9a1 a.5.7.1 (A:437-491) 2-isopropylmalate synthase LeuA, communication domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=16.70 E-value=36 Score=18.48 Aligned_cols=13 Identities=23% Similarity=0.705 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHH
Q 043633 10 IEETWTLFHQKFT 22 (128)
Q Consensus 10 I~~~w~~F~~~F~ 22 (128)
-.++|+.|.++|.
T Consensus 41 ~~~I~~~F~~~Yl 53 (55)
T d1sr9a1 41 PKEMWDAFAEEYL 53 (55)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 4678999998874
Done!