Query 043635
Match_columns 560
No_of_seqs 210 out of 340
Neff 5.3
Searched_HMMs 13730
Date Mon Mar 25 11:31:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043635.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/043635hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1plsa_ b.55.1.1 (A:) Pleckstr 13.5 56 0.004 24.6 3.0 36 518-557 76-111 (113)
2 d1r6ta1 a.16.1.3 (A:7-60) N-te 12.6 73 0.0053 22.7 3.0 24 531-554 2-25 (54)
3 d1fyja_ a.16.1.3 (A:) Multifun 12.4 67 0.0049 23.1 2.8 23 532-554 2-24 (57)
4 d1u5da1 b.55.1.1 (A:108-213) S 11.9 74 0.0054 23.4 3.2 28 518-549 78-105 (106)
5 d1unqa_ b.55.1.1 (A:) Rac-alph 11.2 43 0.0031 25.2 1.5 34 515-552 81-114 (118)
6 d2jn6a1 a.4.1.19 (A:1-89) Unch 10.8 55 0.004 24.7 2.0 22 532-553 61-82 (89)
7 d1grja1 a.2.1.1 (A:2-79) GreA 8.1 73 0.0053 24.1 1.7 22 529-550 51-72 (78)
8 d1fxkc_ a.2.5.1 (C:) Prefoldin 7.8 84 0.0062 25.1 2.1 28 526-553 11-38 (133)
9 d2eiaa1 a.28.3.1 (A:148-222) E 7.5 2E+02 0.015 21.1 4.1 59 76-148 9-68 (75)
10 d2clyb1 f.53.1.1 (B:4-123) ATP 7.4 1.2E+02 0.0088 24.6 2.9 20 531-550 100-119 (120)
No 1
>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.46 E-value=56 Score=24.56 Aligned_cols=36 Identities=6% Similarity=0.144 Sum_probs=29.1
Q ss_pred CCcccccccccchhhhhHHHHHHHHHHHHHHHhccccccc
Q 043635 518 GGSKCDCCDMSKRQILHLEEWISRLEAVVAKLKAGKFHYK 557 (560)
Q Consensus 518 ~~~~~~~~~~~~~~~~~le~~i~~le~~i~~lk~~~~~~~ 557 (560)
+...+|++ .+..+.++||..|+.+|+.++....+|.
T Consensus 76 ~~~~~~~a----~s~~e~~~Wi~ai~~ai~~~~~~~~~~~ 111 (113)
T d1plsa_ 76 QQDHFFQA----AFLEERDAWVRDINKAIKCIEGLEHHHH 111 (113)
T ss_dssp TEEEEEEC----SSHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred CeEEEEEC----CCHHHHHHHHHHHHHHHHhCcCCCCcCC
Confidence 44567777 4677999999999999999988777664
No 2
>d1r6ta1 a.16.1.3 (A:7-60) N-terminal domain of eukaryotic tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.56 E-value=73 Score=22.71 Aligned_cols=24 Identities=33% Similarity=0.376 Sum_probs=21.2
Q ss_pred hhhhHHHHHHHHHHHHHHHhcccc
Q 043635 531 QILHLEEWISRLEAVVAKLKAGKF 554 (560)
Q Consensus 531 ~~~~le~~i~~le~~i~~lk~~~~ 554 (560)
++.+|++.|..=-.+|.+||+.|-
T Consensus 2 S~~eL~~~I~~QGd~VR~LKa~ka 25 (54)
T d1r6ta1 2 SLLELFNSIATQGELVRSLKAGNA 25 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHccCC
Confidence 578999999999999999999874
No 3
>d1fyja_ a.16.1.3 (A:) Multifunctional Glu-Pro-tRNA synthase (EPRS) second repeated element {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.37 E-value=67 Score=23.15 Aligned_cols=23 Identities=35% Similarity=0.250 Sum_probs=19.7
Q ss_pred hhhHHHHHHHHHHHHHHHhcccc
Q 043635 532 ILHLEEWISRLEAVVAKLKAGKF 554 (560)
Q Consensus 532 ~~~le~~i~~le~~i~~lk~~~~ 554 (560)
.+.|++.|..-=.+|.+||++|-
T Consensus 2 ~~~L~~~V~~QGd~VR~LK~~ka 24 (57)
T d1fyja_ 2 SLVLYNRVAVQGDVVRELKAKKA 24 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Confidence 46789999999999999999873
No 4
>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.90 E-value=74 Score=23.41 Aligned_cols=28 Identities=7% Similarity=0.194 Sum_probs=23.0
Q ss_pred CCcccccccccchhhhhHHHHHHHHHHHHHHH
Q 043635 518 GGSKCDCCDMSKRQILHLEEWISRLEAVVAKL 549 (560)
Q Consensus 518 ~~~~~~~~~~~~~~~~~le~~i~~le~~i~~l 549 (560)
+....|++ .+-.+.++||.-|+.||+.|
T Consensus 78 ~~~~~f~a----~s~~e~~~W~~ai~~~i~~l 105 (106)
T d1u5da1 78 RRTYEFTA----TSPAEARDWVDQISFLLKDL 105 (106)
T ss_dssp SCCEEEEC----SSHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEe----CCHHHHHHHHHHHHHHHHHc
Confidence 34567888 47778999999999999876
No 5
>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.18 E-value=43 Score=25.21 Aligned_cols=34 Identities=18% Similarity=0.115 Sum_probs=25.6
Q ss_pred CCCCCcccccccccchhhhhHHHHHHHHHHHHHHHhcc
Q 043635 515 GEGGGSKCDCCDMSKRQILHLEEWISRLEAVVAKLKAG 552 (560)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~le~~i~~le~~i~~lk~~ 552 (560)
+.......|++ .+..+.++||.-|+.+|..++..
T Consensus 81 ~~~~~~~~f~a----~s~~e~~~Wi~ai~~~~~~~~~~ 114 (118)
T d1unqa_ 81 WTTVIERTFHV----ETPEEREEWTTAIQTVADGLKKQ 114 (118)
T ss_dssp TTEEEEEEEEC----SSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceeEEEEEe----CCHHHHHHHHHHHHHHHHHhhcc
Confidence 33334456777 36678999999999999998864
No 6
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=10.83 E-value=55 Score=24.69 Aligned_cols=22 Identities=23% Similarity=0.120 Sum_probs=18.2
Q ss_pred hhhHHHHHHHHHHHHHHHhccc
Q 043635 532 ILHLEEWISRLEAVVAKLKAGK 553 (560)
Q Consensus 532 ~~~le~~i~~le~~i~~lk~~~ 553 (560)
....+.+|.+||+..+.||++-
T Consensus 61 ~~~~~~ei~~L~~En~~Lk~~~ 82 (89)
T d2jn6a1 61 AVSEAEQIRQLKKENALQRART 82 (89)
T ss_dssp HHHTHHHHHHHHHCGGGGGGTT
T ss_pred chhHHHHHHHHHHHHHHHHHHH
Confidence 3456789999999999999874
No 7
>d1grja1 a.2.1.1 (A:2-79) GreA transcript cleavage protein, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=8.09 E-value=73 Score=24.14 Aligned_cols=22 Identities=23% Similarity=0.214 Sum_probs=18.9
Q ss_pred chhhhhHHHHHHHHHHHHHHHh
Q 043635 529 KRQILHLEEWISRLEAVVAKLK 550 (560)
Q Consensus 529 ~~~~~~le~~i~~le~~i~~lk 550 (560)
+..-..+|+||..||..++..+
T Consensus 51 Ke~q~~~e~RI~eLe~~L~~a~ 72 (78)
T d1grja1 51 REQQGFCEGRIKDIEAKLSNAQ 72 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHHHHHHHHHHHHHhCce
Confidence 7778899999999999987654
No 8
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=7.77 E-value=84 Score=25.08 Aligned_cols=28 Identities=11% Similarity=0.264 Sum_probs=20.1
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHhccc
Q 043635 526 DMSKRQILHLEEWISRLEAVVAKLKAGK 553 (560)
Q Consensus 526 ~~~~~~~~~le~~i~~le~~i~~lk~~~ 553 (560)
++++..+..|.++|.+|+..++++..++
T Consensus 11 ~~l~~~l~~l~~~i~~l~~~~~e~~~~~ 38 (133)
T d1fxkc_ 11 NIYQSQVELIQQQMEAVRATISELEILE 38 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677888888888888777776543
No 9
>d2eiaa1 a.28.3.1 (A:148-222) EIAV capsid protein p26 {Equine infectious anemia virus [TaxId: 11665]}
Probab=7.47 E-value=2e+02 Score=21.10 Aligned_cols=59 Identities=19% Similarity=0.157 Sum_probs=37.0
Q ss_pred CCCCChHHHHHhhhccccchhhhcchhHHHHhhccccccChhHHHHH-HhhhcccccceeeccccchhhHHHHH
Q 043635 76 PPQKKWKAWVGRMAGLCESTWKKAGIHEAILNSTNEIRINYDLILGL-AKKWCPETKSFIFSWGEATITLEDMM 148 (560)
Q Consensus 76 ~p~~~w~~W~~~~~~~~~~~w~~~GI~~ai~~s~~~~~~d~~Li~Al-~erW~peTnTF~fp~GEmTiTL~DVm 148 (560)
+|...+.+.|+|+ +.++......-..-..++..| .+.=+|+..+.+-+.|. ..||+|+|
T Consensus 9 GpkEpf~dfVdRl-------------~~a~~~~~~~~~~k~~~~~~L~~qNANpdCk~iLr~l~~-~~tLeemm 68 (75)
T d2eiaa1 9 GAKEPYPEFVDRL-------------LSQIKSEGHPQEISKFLTDTLTIQNANEECRNAMRHLRP-EDTLEEKM 68 (75)
T ss_dssp CTTCCHHHHHHHH-------------HHHHHHTTCCHHHHHHHHHHHHHHTSCTTTTTTTTTCCT-TSCHHHHH
T ss_pred CCCCCHHHHHHHH-------------HHHHHhhcCcHhHHHHHHHHHhHhcCCHHHHHHHHhcCC-CCCHHHHH
Confidence 3677788888777 334433333322222233333 34568889999988885 79999997
No 10
>d2clyb1 f.53.1.1 (B:4-123) ATP synthase subunit d, mitochondrial {Cow (Bos taurus) [TaxId: 9913]}
Probab=7.38 E-value=1.2e+02 Score=24.57 Aligned_cols=20 Identities=15% Similarity=0.234 Sum_probs=17.5
Q ss_pred hhhhHHHHHHHHHHHHHHHh
Q 043635 531 QILHLEEWISRLEAVVAKLK 550 (560)
Q Consensus 531 ~~~~le~~i~~le~~i~~lk 550 (560)
-..+.++||..||..+++||
T Consensus 100 ~~~~s~~rI~~lekeLe~ik 119 (120)
T d2clyb1 100 FLTQSKTRIQEYEKELEKMR 119 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 56678899999999999987
Done!